Query 000556
Match_columns 1426
No_of_seqs 793 out of 5999
Neff 7.6
Searched_HMMs 46136
Date Mon Apr 1 19:10:09 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000556.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000556hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 7E-254 2E-258 2338.9 91.7 1321 36-1426 12-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 1E-235 2E-240 2338.9 137.3 1421 4-1426 4-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 8E-185 2E-189 1857.6 131.8 1272 93-1421 2-1389(1394)
4 KOG0061 Transporter, ABC super 100.0 6.4E-95 1.4E-99 907.7 54.7 574 826-1425 23-611 (613)
5 TIGR00955 3a01204 The Eye Pigm 100.0 2.3E-94 5E-99 914.5 58.5 564 853-1426 37-617 (617)
6 PLN03211 ABC transporter G-25; 100.0 4.6E-94 9.9E-99 909.6 60.7 580 825-1423 36-659 (659)
7 TIGR00956 3a01205 Pleiotropic 100.0 2.6E-91 5.6E-96 946.6 62.1 588 825-1423 26-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 5.4E-90 1.2E-94 928.2 57.4 590 825-1423 128-790 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 2.5E-84 5.3E-89 813.3 37.4 563 852-1424 126-732 (1391)
10 KOG0061 Transporter, ABC super 100.0 4E-77 8.6E-82 747.2 54.0 567 114-757 21-608 (613)
11 PLN03211 ABC transporter G-25; 100.0 9.4E-76 2E-80 742.7 59.9 593 114-757 35-658 (659)
12 TIGR00955 3a01204 The Eye Pigm 100.0 3.6E-76 7.7E-81 748.3 54.8 551 162-756 35-612 (617)
13 KOG0055 Multidrug/pheromone ex 100.0 8.6E-74 1.9E-78 721.4 54.3 777 159-1066 361-1208(1228)
14 KOG0054 Multidrug resistance-a 100.0 7.4E-73 1.6E-77 730.7 52.9 769 165-1066 534-1357(1381)
15 TIGR01257 rim_protein retinal- 100.0 3E-67 6.5E-72 706.0 68.4 216 828-1066 1937-2154(2272)
16 PLN03130 ABC transporter C fam 100.0 3.3E-66 7.1E-71 708.3 63.3 211 827-1066 1236-1456(1622)
17 PLN03232 ABC transporter C fam 100.0 3.4E-66 7.3E-71 709.2 54.0 211 827-1066 1233-1453(1495)
18 COG1123 ATPase components of v 100.0 2.2E-65 4.7E-70 608.2 50.9 474 165-1066 22-514 (539)
19 TIGR00957 MRP_assoc_pro multi 100.0 4.5E-64 9.8E-69 689.1 57.0 211 827-1066 1283-1503(1522)
20 PTZ00265 multidrug resistance 100.0 1.3E-63 2.8E-68 676.7 57.9 217 827-1066 1164-1447(1466)
21 PRK13549 xylose transporter AT 100.0 1.2E-63 2.6E-68 623.1 46.2 460 165-1068 18-491 (506)
22 PRK10261 glutathione transport 100.0 7.3E-63 1.6E-67 627.2 53.7 487 165-1066 29-548 (623)
23 PRK09700 D-allose transporter 100.0 3.3E-63 7.2E-68 620.2 45.9 458 165-1066 18-493 (510)
24 PRK10762 D-ribose transporter 100.0 4.5E-63 9.7E-68 617.2 46.7 450 165-1068 17-481 (501)
25 PTZ00243 ABC transporter; Prov 100.0 2.7E-62 5.8E-67 669.3 58.7 211 827-1066 1307-1528(1560)
26 PRK15134 microcin C ABC transp 100.0 2.3E-62 5E-67 614.8 49.6 464 165-1066 22-510 (529)
27 TIGR01271 CFTR_protein cystic 100.0 8E-62 1.7E-66 664.8 57.5 210 827-1066 1216-1435(1490)
28 PRK15439 autoinducer 2 ABC tra 100.0 2.6E-62 5.7E-67 610.6 48.0 453 165-1067 24-488 (510)
29 TIGR03269 met_CoM_red_A2 methy 100.0 4.6E-62 9.9E-67 611.4 50.0 445 165-1066 13-512 (520)
30 TIGR02633 xylG D-xylose ABC tr 100.0 5E-62 1.1E-66 608.5 47.5 459 165-1066 14-487 (500)
31 PRK11288 araG L-arabinose tran 100.0 1E-61 2.3E-66 605.0 48.0 452 165-1069 17-483 (501)
32 PRK10982 galactose/methyl gala 100.0 5.5E-61 1.2E-65 597.4 46.5 450 165-1067 11-476 (491)
33 PRK10938 putative molybdenum t 100.0 9E-60 2E-64 586.8 42.7 447 165-1063 16-484 (490)
34 COG4172 ABC-type uncharacteriz 100.0 4.5E-58 9.9E-63 510.6 44.3 470 163-1066 21-511 (534)
35 PRK11819 putative ABC transpor 100.0 1.7E-57 3.7E-62 572.6 50.9 201 828-1065 324-527 (556)
36 PRK15064 ABC transporter ATP-b 100.0 6.4E-57 1.4E-61 565.7 49.8 198 828-1066 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 4.1E-56 8.9E-61 560.1 55.0 201 828-1065 322-525 (552)
38 PRK10636 putative ABC transpor 100.0 3.6E-54 7.8E-59 547.8 50.8 197 828-1066 312-512 (638)
39 PRK13409 putative ATPase RIL; 100.0 5.7E-55 1.2E-59 546.8 42.0 211 828-1080 340-554 (590)
40 PRK11147 ABC transporter ATPas 100.0 2.2E-53 4.8E-58 542.2 55.3 202 828-1066 319-523 (635)
41 COG1129 MglA ABC-type sugar tr 100.0 1.7E-53 3.7E-58 503.8 44.1 450 161-1062 17-481 (500)
42 PLN03073 ABC transporter F fam 100.0 8.2E-52 1.8E-56 526.6 47.2 200 828-1066 508-709 (718)
43 COG0488 Uup ATPase components 100.0 2.9E-51 6.3E-56 499.2 44.5 499 163-1065 14-519 (530)
44 COG3845 ABC-type uncharacteriz 100.0 1.9E-49 4.1E-54 458.0 40.0 458 163-1067 15-488 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 8.6E-43 1.9E-47 363.8 23.0 214 829-1066 3-220 (240)
46 KOG0927 Predicted transporter 100.0 5.6E-42 1.2E-46 396.1 27.6 202 827-1066 388-591 (614)
47 COG1126 GlnQ ABC-type polar am 100.0 2.4E-42 5.2E-47 360.4 21.2 222 162-435 12-238 (240)
48 COG1131 CcmA ABC-type multidru 100.0 3.1E-41 6.8E-46 389.1 24.9 214 829-1066 5-221 (293)
49 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 7.7E-41 1.7E-45 366.7 23.9 216 828-1068 4-224 (254)
50 COG1135 AbcC ABC-type metal io 100.0 6.7E-41 1.5E-45 366.6 20.2 218 829-1066 2-226 (339)
51 COG1116 TauB ABC-type nitrate/ 100.0 1.7E-40 3.6E-45 358.4 21.8 204 828-1057 3-207 (248)
52 COG1127 Ttg2A ABC-type transpo 100.0 1.7E-40 3.8E-45 351.8 21.4 230 828-1081 8-249 (263)
53 COG1135 AbcC ABC-type metal io 100.0 1.5E-40 3.2E-45 363.9 20.9 224 163-437 17-246 (339)
54 COG1120 FepC ABC-type cobalami 100.0 1.9E-40 4E-45 365.8 20.8 217 829-1067 3-224 (258)
55 COG1136 SalX ABC-type antimicr 100.0 7.6E-40 1.6E-44 354.1 23.7 193 854-1058 18-219 (226)
56 COG4555 NatA ABC-type Na+ tran 100.0 1E-40 2.3E-45 342.4 15.7 200 855-1066 16-217 (245)
57 COG3839 MalK ABC-type sugar tr 100.0 3.1E-40 6.7E-45 377.5 21.2 217 167-434 18-235 (338)
58 COG1125 OpuBA ABC-type proline 100.0 4.4E-40 9.4E-45 349.1 20.1 211 163-414 12-225 (309)
59 COG1125 OpuBA ABC-type proline 100.0 3.5E-40 7.5E-45 349.9 18.8 213 829-1066 2-220 (309)
60 COG1118 CysA ABC-type sulfate/ 100.0 6.4E-40 1.4E-44 357.7 20.0 223 163-434 13-239 (345)
61 COG3842 PotA ABC-type spermidi 100.0 4.6E-40 1E-44 378.0 19.4 223 164-436 17-240 (352)
62 COG3638 ABC-type phosphate/pho 100.0 7.1E-40 1.5E-44 346.2 18.7 220 828-1068 3-234 (258)
63 COG1131 CcmA ABC-type multidru 100.0 2.4E-39 5.2E-44 373.5 23.8 212 164-418 17-230 (293)
64 COG1127 Ttg2A ABC-type transpo 100.0 1.9E-39 4E-44 344.0 20.8 211 163-414 19-235 (263)
65 COG1120 FepC ABC-type cobalami 100.0 7.7E-40 1.7E-44 360.9 18.5 210 164-413 14-227 (258)
66 TIGR01257 rim_protein retinal- 100.0 5.4E-35 1.2E-39 395.2 68.3 216 827-1066 927-1144(2272)
67 COG1116 TauB ABC-type nitrate/ 100.0 4.6E-39 1E-43 347.2 21.1 192 165-401 16-207 (248)
68 COG2884 FtsE Predicted ATPase 100.0 3.4E-39 7.4E-44 328.9 18.5 212 829-1065 2-220 (223)
69 COG1118 CysA ABC-type sulfate/ 100.0 2.4E-39 5.2E-44 353.2 18.4 206 852-1067 13-223 (345)
70 COG3839 MalK ABC-type sugar tr 100.0 6.2E-39 1.4E-43 366.8 21.9 214 828-1066 3-218 (338)
71 PRK13537 nodulation ABC transp 100.0 4E-38 8.7E-43 366.9 26.6 214 828-1066 7-222 (306)
72 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.9E-38 6.2E-43 346.4 23.7 208 166-414 18-227 (254)
73 COG1117 PstB ABC-type phosphat 100.0 8.6E-39 1.9E-43 331.7 18.1 218 828-1066 7-232 (253)
74 COG1136 SalX ABC-type antimicr 100.0 3E-38 6.6E-43 341.7 23.1 196 165-403 18-220 (226)
75 COG4555 NatA ABC-type Na+ tran 100.0 8.8E-39 1.9E-43 328.2 17.2 206 165-414 15-222 (245)
76 COG3842 PotA ABC-type spermidi 100.0 1.4E-38 3E-43 365.9 20.0 215 828-1066 5-221 (352)
77 COG3638 ABC-type phosphate/pho 100.0 4.3E-38 9.4E-43 332.7 20.1 217 163-414 15-237 (258)
78 TIGR02314 ABC_MetN D-methionin 100.0 2.2E-37 4.7E-42 363.4 26.4 217 829-1066 2-225 (343)
79 cd03261 ABC_Org_Solvent_Resist 100.0 2.6E-37 5.7E-42 348.4 25.3 213 830-1066 2-221 (235)
80 TIGR02314 ABC_MetN D-methionin 100.0 4.5E-37 9.7E-42 360.7 27.0 206 165-413 18-229 (343)
81 TIGR03265 PhnT2 putative 2-ami 100.0 3.3E-37 7.1E-42 364.5 26.0 214 828-1066 4-219 (353)
82 PRK11650 ugpC glycerol-3-phosp 100.0 3.2E-37 6.9E-42 365.0 25.8 214 829-1066 4-219 (356)
83 PRK13536 nodulation factor exp 100.0 6.9E-37 1.5E-41 360.0 27.8 215 827-1066 40-256 (340)
84 PRK11432 fbpC ferric transport 100.0 5.4E-37 1.2E-41 362.0 26.5 214 828-1066 6-221 (351)
85 COG1117 PstB ABC-type phosphat 100.0 1.1E-37 2.3E-42 323.6 17.6 222 164-433 19-248 (253)
86 TIGR03258 PhnT 2-aminoethylpho 100.0 6E-37 1.3E-41 362.6 26.0 214 828-1066 5-223 (362)
87 cd03259 ABC_Carb_Solutes_like 100.0 6.8E-37 1.5E-41 339.8 24.2 210 830-1064 2-213 (213)
88 PRK11650 ugpC glycerol-3-phosp 100.0 6.5E-37 1.4E-41 362.4 24.9 206 165-413 17-223 (356)
89 KOG0058 Peptide exporter, ABC 100.0 2.7E-37 5.8E-42 372.0 21.6 213 159-414 476-691 (716)
90 PRK11432 fbpC ferric transport 100.0 6.5E-37 1.4E-41 361.3 24.0 206 165-413 19-225 (351)
91 TIGR01188 drrA daunorubicin re 100.0 6.6E-37 1.4E-41 357.1 23.8 202 853-1066 5-208 (302)
92 TIGR01186 proV glycine betaine 100.0 1E-36 2.2E-41 359.4 25.6 208 164-414 5-219 (363)
93 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.6E-36 3.5E-41 338.5 25.7 215 830-1066 2-218 (220)
94 TIGR00960 3a0501s02 Type II (G 100.0 1E-36 2.2E-41 339.3 24.0 207 829-1057 2-214 (216)
95 TIGR03265 PhnT2 putative 2-ami 100.0 7.3E-37 1.6E-41 361.6 23.9 207 165-414 17-224 (353)
96 cd03269 ABC_putative_ATPase Th 100.0 1.5E-36 3.1E-41 336.4 24.5 209 830-1064 2-210 (210)
97 COG1122 CbiO ABC-type cobalt t 100.0 5.8E-37 1.3E-41 339.0 21.1 214 829-1066 4-223 (235)
98 PRK10851 sulfate/thiosulfate t 100.0 1.4E-36 3.1E-41 359.1 26.0 216 829-1066 3-221 (353)
99 COG1124 DppF ABC-type dipeptid 100.0 8.6E-37 1.9E-41 325.9 21.5 206 165-414 20-231 (252)
100 TIGR03258 PhnT 2-aminoethylpho 100.0 9.6E-37 2.1E-41 360.9 24.0 207 165-413 18-227 (362)
101 PRK09452 potA putrescine/sperm 100.0 2.1E-36 4.6E-41 359.2 26.6 214 828-1066 14-229 (375)
102 cd03301 ABC_MalK_N The N-termi 100.0 2.1E-36 4.5E-41 336.0 24.9 211 829-1064 1-213 (213)
103 TIGR01288 nodI ATP-binding ABC 100.0 2E-36 4.3E-41 353.3 25.8 214 828-1066 4-219 (303)
104 cd03265 ABC_DrrA DrrA is the A 100.0 2.2E-36 4.8E-41 337.4 25.0 213 829-1066 1-216 (220)
105 COG1137 YhbG ABC-type (unclass 100.0 1.9E-37 4.2E-42 318.1 14.8 206 851-1066 14-223 (243)
106 KOG0058 Peptide exporter, ABC 100.0 1.5E-37 3.3E-42 374.2 16.4 215 825-1066 462-686 (716)
107 PRK09452 potA putrescine/sperm 100.0 1.9E-36 4.1E-41 359.6 25.0 218 165-433 27-245 (375)
108 PRK11153 metN DL-methionine tr 100.0 2.8E-36 6.1E-41 356.7 26.1 217 829-1066 2-225 (343)
109 cd03219 ABC_Mj1267_LivG_branch 100.0 3E-36 6.5E-41 340.2 25.1 215 830-1066 2-227 (236)
110 COG3840 ThiQ ABC-type thiamine 100.0 7.6E-37 1.6E-41 308.7 17.9 210 830-1066 3-214 (231)
111 cd03266 ABC_NatA_sodium_export 100.0 2.5E-36 5.5E-41 336.5 23.7 215 829-1064 2-218 (218)
112 cd03296 ABC_CysA_sulfate_impor 100.0 4.8E-36 1E-40 339.0 26.2 216 829-1066 3-221 (239)
113 cd03218 ABC_YhbG The ABC trans 100.0 3.3E-36 7.2E-41 338.9 24.7 212 830-1066 2-217 (232)
114 PRK11607 potG putrescine trans 100.0 5.1E-36 1.1E-40 356.6 27.6 214 828-1066 19-234 (377)
115 PRK11000 maltose/maltodextrin 100.0 3.6E-36 7.7E-41 358.6 26.2 214 828-1066 3-218 (369)
116 PRK13537 nodulation ABC transp 100.0 2.3E-36 5E-41 352.2 23.9 206 165-414 20-227 (306)
117 TIGR01186 proV glycine betaine 100.0 2.8E-36 6.2E-41 355.6 24.9 203 852-1066 4-214 (363)
118 COG1124 DppF ABC-type dipeptid 100.0 1.4E-36 3.1E-41 324.3 20.1 217 828-1067 3-227 (252)
119 cd03234 ABCG_White The White s 100.0 4.9E-36 1.1E-40 335.9 25.5 221 829-1064 4-226 (226)
120 COG2884 FtsE Predicted ATPase 100.0 1.7E-36 3.7E-41 309.2 19.4 200 165-408 15-220 (223)
121 PRK10851 sulfate/thiosulfate t 100.0 5.8E-36 1.3E-40 353.9 27.1 210 165-413 15-225 (353)
122 TIGR03522 GldA_ABC_ATP gliding 100.0 4.4E-36 9.5E-41 349.8 25.7 212 829-1066 3-216 (301)
123 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.5E-36 7.7E-41 335.4 23.5 208 829-1057 1-216 (218)
124 PRK09536 btuD corrinoid ABC tr 100.0 3.9E-36 8.5E-41 358.6 25.1 218 828-1067 3-224 (402)
125 cd03268 ABC_BcrA_bacitracin_re 100.0 4E-36 8.7E-41 332.4 23.3 206 830-1064 2-208 (208)
126 COG0410 LivF ABC-type branched 100.0 3.3E-36 7.2E-41 319.5 21.0 208 163-414 14-226 (237)
127 cd03260 ABC_PstB_phosphate_tra 100.0 4.8E-36 1E-40 336.4 23.6 213 830-1066 2-224 (227)
128 cd03261 ABC_Org_Solvent_Resist 100.0 6.3E-36 1.4E-40 337.2 24.7 207 165-413 13-225 (235)
129 cd03258 ABC_MetN_methionine_tr 100.0 6.1E-36 1.3E-40 336.9 24.0 217 829-1066 2-225 (233)
130 TIGR02673 FtsE cell division A 100.0 5.9E-36 1.3E-40 332.6 23.5 206 829-1057 2-213 (214)
131 COG1122 CbiO ABC-type cobalt t 100.0 3E-36 6.4E-41 333.3 20.9 207 165-414 17-228 (235)
132 COG2274 SunT ABC-type bacterio 100.0 4.5E-35 9.9E-40 368.4 34.1 217 822-1066 465-691 (709)
133 COG3840 ThiQ ABC-type thiamine 100.0 2.3E-36 5E-41 305.2 18.0 201 170-413 17-218 (231)
134 PRK09493 glnQ glutamine ABC tr 100.0 1.1E-35 2.3E-40 336.4 25.6 214 829-1066 2-220 (240)
135 cd03256 ABC_PhnC_transporter A 100.0 5.6E-36 1.2E-40 339.1 23.3 216 830-1066 2-229 (241)
136 TIGR01188 drrA daunorubicin re 100.0 5.7E-36 1.2E-40 349.2 24.0 206 165-414 6-213 (302)
137 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7.5E-36 1.6E-40 342.7 24.3 203 852-1066 35-245 (269)
138 cd03226 ABC_cobalt_CbiO_domain 100.0 4E-36 8.6E-41 331.6 21.2 191 854-1060 13-204 (205)
139 cd03263 ABC_subfamily_A The AB 100.0 8.1E-36 1.8E-40 333.0 23.9 214 829-1066 1-216 (220)
140 KOG0062 ATPase component of AB 100.0 1.1E-35 2.3E-40 342.5 25.4 206 825-1066 359-564 (582)
141 PRK11153 metN DL-methionine tr 100.0 1.5E-35 3.2E-40 350.5 27.4 206 165-413 18-229 (343)
142 COG0411 LivG ABC-type branched 100.0 1.9E-36 4.1E-41 323.7 17.8 224 160-414 12-239 (250)
143 PRK11607 potG putrescine trans 100.0 6.2E-36 1.4E-40 355.8 24.2 206 165-413 32-238 (377)
144 cd03292 ABC_FtsE_transporter F 100.0 9.2E-36 2E-40 331.1 23.9 205 830-1057 2-212 (214)
145 PRK13637 cbiO cobalt transport 100.0 1E-35 2.2E-40 344.4 25.1 218 829-1066 3-229 (287)
146 PRK11629 lolD lipoprotein tran 100.0 1.9E-35 4.1E-40 332.8 26.5 217 828-1066 5-229 (233)
147 COG4152 ABC-type uncharacteriz 100.0 2.4E-36 5.2E-41 318.6 17.7 202 852-1066 13-214 (300)
148 PRK11264 putative amino-acid A 100.0 1.4E-35 2.9E-40 337.7 25.4 214 829-1066 4-228 (250)
149 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.2E-35 2.5E-40 336.4 24.5 213 830-1066 2-220 (242)
150 PRK11248 tauB taurine transpor 100.0 2.1E-35 4.6E-40 336.1 26.2 212 829-1066 2-215 (255)
151 PRK11000 maltose/maltodextrin 100.0 1.2E-35 2.6E-40 354.0 25.2 206 165-413 16-222 (369)
152 cd03224 ABC_TM1139_LivF_branch 100.0 1E-35 2.2E-40 332.7 23.1 210 830-1066 2-216 (222)
153 PRK13647 cbiO cobalt transport 100.0 1.7E-35 3.6E-40 340.6 25.0 215 828-1066 4-222 (274)
154 COG2274 SunT ABC-type bacterio 100.0 6.5E-36 1.4E-40 376.1 23.1 207 166-414 487-696 (709)
155 PRK11831 putative ABC transpor 100.0 2.6E-35 5.6E-40 338.4 26.1 215 828-1066 7-228 (269)
156 TIGR02315 ABC_phnC phosphonate 100.0 8.4E-36 1.8E-40 338.0 21.8 217 829-1066 2-230 (243)
157 COG4559 ABC-type hemin transpo 100.0 8.4E-36 1.8E-40 308.6 19.4 207 165-413 14-229 (259)
158 cd03264 ABC_drug_resistance_li 100.0 1.7E-35 3.8E-40 328.1 23.4 209 829-1064 1-211 (211)
159 COG1137 YhbG ABC-type (unclass 100.0 1.3E-36 2.8E-41 312.0 13.0 212 161-414 13-228 (243)
160 PRK10908 cell division protein 100.0 2.7E-35 5.8E-40 329.1 24.8 208 829-1060 2-215 (222)
161 PRK13634 cbiO cobalt transport 100.0 1.9E-35 4.2E-40 342.6 24.2 218 829-1066 3-230 (290)
162 PRK13631 cbiO cobalt transport 100.0 2.3E-35 4.9E-40 345.0 24.8 218 828-1066 21-260 (320)
163 KOG0057 Mitochondrial Fe/S clu 100.0 1E-35 2.2E-40 346.2 21.6 229 110-414 343-574 (591)
164 cd03262 ABC_HisP_GlnQ_permease 100.0 2E-35 4.3E-40 328.2 23.0 205 830-1057 2-211 (213)
165 PRK13651 cobalt transporter AT 100.0 2.3E-35 5E-40 343.0 24.5 218 829-1066 3-249 (305)
166 PRK13643 cbiO cobalt transport 100.0 2.5E-35 5.4E-40 341.3 24.7 217 829-1066 2-228 (288)
167 PRK10895 lipopolysaccharide AB 100.0 2.8E-35 6E-40 333.2 24.3 214 829-1066 4-221 (241)
168 PRK13536 nodulation factor exp 100.0 2.1E-35 4.6E-40 347.4 24.2 206 165-414 54-261 (340)
169 COG0410 LivF ABC-type branched 100.0 1.7E-35 3.7E-40 314.0 20.9 212 829-1066 4-221 (237)
170 cd03257 ABC_NikE_OppD_transpor 100.0 2.8E-35 6E-40 330.6 23.9 217 829-1064 2-228 (228)
171 TIGR00972 3a0107s01c2 phosphat 100.0 4.4E-35 9.5E-40 332.8 25.6 214 829-1066 2-227 (247)
172 PRK10619 histidine/lysine/argi 100.0 4.9E-35 1.1E-39 334.3 26.1 215 828-1066 5-236 (257)
173 COG0411 LivG ABC-type branched 100.0 1.1E-35 2.4E-40 317.8 19.2 207 852-1067 15-235 (250)
174 cd03235 ABC_Metallic_Cations A 100.0 1.7E-35 3.6E-40 328.7 21.5 199 854-1064 12-213 (213)
175 cd03259 ABC_Carb_Solutes_like 100.0 2.7E-35 5.8E-40 327.1 23.1 200 165-407 13-213 (213)
176 PRK13636 cbiO cobalt transport 100.0 3.6E-35 7.9E-40 339.3 25.1 215 828-1066 5-226 (283)
177 cd03225 ABC_cobalt_CbiO_domain 100.0 2E-35 4.4E-40 327.6 21.7 193 854-1057 14-210 (211)
178 cd03265 ABC_DrrA DrrA is the A 100.0 3.8E-35 8.3E-40 327.4 23.9 205 165-412 13-219 (220)
179 PRK13646 cbiO cobalt transport 100.0 3.3E-35 7.1E-40 340.2 24.1 217 829-1066 3-230 (286)
180 TIGR02211 LolD_lipo_ex lipopro 100.0 4.6E-35 9.9E-40 327.2 24.4 211 829-1061 2-220 (221)
181 PRK13637 cbiO cobalt transport 100.0 5.5E-35 1.2E-39 338.3 25.8 218 165-425 20-248 (287)
182 PRK11247 ssuB aliphatic sulfon 100.0 4.1E-35 8.8E-40 333.2 24.2 206 828-1066 12-218 (257)
183 PRK13650 cbiO cobalt transport 100.0 3.5E-35 7.6E-40 338.8 23.9 216 828-1066 4-224 (279)
184 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5.1E-35 1.1E-39 335.8 25.1 208 163-413 35-249 (269)
185 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7.8E-35 1.7E-39 328.4 26.1 212 829-1066 2-216 (236)
186 PRK11614 livF leucine/isoleuci 100.0 4.3E-35 9.4E-40 330.8 23.7 212 828-1066 5-221 (237)
187 TIGR03005 ectoine_ehuA ectoine 100.0 6.9E-35 1.5E-39 332.2 25.4 214 829-1066 1-231 (252)
188 TIGR03740 galliderm_ABC gallid 100.0 9.9E-35 2.1E-39 324.8 25.7 208 830-1067 2-209 (223)
189 PRK11124 artP arginine transpo 100.0 7.2E-35 1.6E-39 330.1 24.9 213 829-1066 3-225 (242)
190 PRK13643 cbiO cobalt transport 100.0 1.1E-34 2.4E-39 335.9 27.0 224 166-433 20-255 (288)
191 cd03296 ABC_CysA_sulfate_impor 100.0 6.5E-35 1.4E-39 329.7 24.4 210 165-413 15-225 (239)
192 PRK13644 cbiO cobalt transport 100.0 5.2E-35 1.1E-39 336.4 24.0 213 829-1066 2-219 (274)
193 PRK13641 cbiO cobalt transport 100.0 6.9E-35 1.5E-39 337.7 24.9 219 828-1066 2-229 (287)
194 PRK14273 phosphate ABC transpo 100.0 9.5E-35 2.1E-39 331.4 25.7 215 828-1066 7-233 (254)
195 PRK15079 oligopeptide ABC tran 100.0 9.6E-35 2.1E-39 341.0 26.3 229 828-1066 8-246 (331)
196 PRK14268 phosphate ABC transpo 100.0 1.1E-34 2.4E-39 331.5 26.1 214 828-1066 12-237 (258)
197 TIGR01978 sufC FeS assembly AT 100.0 9.4E-35 2E-39 329.5 25.3 219 829-1066 1-229 (243)
198 PRK14247 phosphate ABC transpo 100.0 1.1E-34 2.4E-39 330.2 25.9 216 829-1066 4-229 (250)
199 TIGR01288 nodI ATP-binding ABC 100.0 6.7E-35 1.5E-39 340.4 24.6 206 165-414 17-224 (303)
200 PRK13652 cbiO cobalt transport 100.0 9.3E-35 2E-39 335.1 25.3 214 829-1066 4-222 (277)
201 PRK14267 phosphate ABC transpo 100.0 1.1E-34 2.3E-39 330.9 25.5 217 828-1066 4-232 (253)
202 COG4559 ABC-type hemin transpo 100.0 2.5E-35 5.4E-40 305.1 18.3 216 829-1067 2-226 (259)
203 cd03219 ABC_Mj1267_LivG_branch 100.0 7.7E-35 1.7E-39 328.7 23.9 215 165-413 13-231 (236)
204 PRK11300 livG leucine/isoleuci 100.0 9.6E-35 2.1E-39 331.8 24.9 217 828-1066 5-238 (255)
205 cd03301 ABC_MalK_N The N-termi 100.0 8.4E-35 1.8E-39 323.1 23.7 200 165-407 13-213 (213)
206 cd03258 ABC_MetN_methionine_tr 100.0 8.5E-35 1.8E-39 327.7 23.9 205 166-413 19-229 (233)
207 PRK13548 hmuV hemin importer A 100.0 1.1E-34 2.3E-39 331.2 24.8 213 829-1066 3-225 (258)
208 cd03293 ABC_NrtD_SsuB_transpor 100.0 9.9E-35 2.1E-39 324.1 23.9 201 165-410 17-219 (220)
209 cd03298 ABC_ThiQ_thiamine_tran 100.0 8E-35 1.7E-39 322.8 22.9 208 830-1064 2-211 (211)
210 cd03233 ABC_PDR_domain1 The pl 100.0 1.3E-34 2.8E-39 318.3 24.3 196 828-1064 3-202 (202)
211 PRK10070 glycine betaine trans 100.0 1E-34 2.2E-39 346.2 25.3 207 164-413 40-253 (400)
212 PRK13634 cbiO cobalt transport 100.0 8.2E-35 1.8E-39 337.3 23.8 218 165-425 20-249 (290)
213 TIGR03411 urea_trans_UrtD urea 100.0 1.4E-34 3.1E-39 327.7 25.0 215 829-1066 3-226 (242)
214 PRK11831 putative ABC transpor 100.0 2.4E-34 5.3E-39 330.4 27.2 207 165-413 20-232 (269)
215 PRK13635 cbiO cobalt transport 100.0 1E-34 2.2E-39 334.7 23.9 214 829-1066 6-224 (279)
216 cd03218 ABC_YhbG The ABC trans 100.0 1.2E-34 2.6E-39 326.3 24.0 205 165-413 13-221 (232)
217 KOG0057 Mitochondrial Fe/S clu 100.0 3.2E-35 6.9E-40 342.1 19.8 212 825-1066 348-569 (591)
218 PRK11629 lolD lipoprotein tran 100.0 2.5E-34 5.4E-39 323.7 26.5 201 165-409 22-229 (233)
219 PRK14241 phosphate transporter 100.0 2.1E-34 4.4E-39 329.4 26.1 217 828-1066 4-237 (258)
220 PRK14245 phosphate ABC transpo 100.0 2.3E-34 5E-39 327.5 26.3 219 828-1066 3-229 (250)
221 cd03260 ABC_PstB_phosphate_tra 100.0 7.2E-35 1.6E-39 326.9 21.8 204 165-411 13-226 (227)
222 PRK14242 phosphate transporter 100.0 2.3E-34 4.9E-39 328.2 26.2 220 827-1066 5-232 (253)
223 COG4525 TauB ABC-type taurine 100.0 5.7E-35 1.2E-39 297.8 18.8 200 854-1066 18-219 (259)
224 PRK11231 fecE iron-dicitrate t 100.0 1.3E-34 2.8E-39 330.4 24.0 217 829-1067 3-223 (255)
225 PRK13638 cbiO cobalt transport 100.0 1.3E-34 2.8E-39 333.2 24.2 213 829-1066 2-220 (271)
226 TIGR03415 ABC_choXWV_ATP choli 100.0 1.4E-34 3E-39 342.6 24.9 209 162-413 34-253 (382)
227 PRK09984 phosphonate/organopho 100.0 1.5E-34 3.2E-39 331.2 24.5 220 828-1067 4-238 (262)
228 PRK10070 glycine betaine trans 100.0 1.2E-34 2.6E-39 345.7 24.3 202 853-1066 40-249 (400)
229 TIGR03522 GldA_ABC_ATP gliding 100.0 1.4E-34 3.1E-39 337.1 24.3 205 165-414 15-221 (301)
230 PRK10575 iron-hydroxamate tran 100.0 1.7E-34 3.8E-39 331.0 24.6 217 828-1066 11-232 (265)
231 cd03300 ABC_PotA_N PotA is an 100.0 2.3E-34 5E-39 323.7 25.1 212 830-1066 2-215 (232)
232 PRK10744 pstB phosphate transp 100.0 2.5E-34 5.3E-39 329.0 25.7 218 825-1066 10-239 (260)
233 cd03263 ABC_subfamily_A The AB 100.0 1.1E-34 2.5E-39 323.7 22.4 203 165-412 15-219 (220)
234 PRK14237 phosphate transporter 100.0 3.5E-34 7.7E-39 328.6 27.0 225 822-1066 14-246 (267)
235 PRK10253 iron-enterobactin tra 100.0 1.5E-34 3.3E-39 331.4 23.9 218 828-1067 7-229 (265)
236 cd03224 ABC_TM1139_LivF_branch 100.0 1.3E-34 2.8E-39 323.8 22.7 203 165-413 13-220 (222)
237 COG4988 CydD ABC-type transpor 100.0 1.2E-34 2.6E-39 343.7 23.6 206 166-414 335-543 (559)
238 cd03256 ABC_PhnC_transporter A 100.0 1.8E-34 3.8E-39 326.9 24.0 214 165-413 14-233 (241)
239 TIGR02769 nickel_nikE nickel i 100.0 2.3E-34 5E-39 330.0 25.2 223 829-1066 3-235 (265)
240 TIGR00960 3a0501s02 Type II (G 100.0 8.7E-35 1.9E-39 323.7 21.1 195 165-403 16-216 (216)
241 PRK10584 putative ABC transpor 100.0 3E-34 6.6E-39 322.1 25.5 213 828-1062 6-226 (228)
242 PRK13649 cbiO cobalt transport 100.0 2.2E-34 4.7E-39 333.0 25.0 217 829-1066 3-229 (280)
243 PRK09473 oppD oligopeptide tra 100.0 3.5E-34 7.6E-39 336.4 27.0 214 165-414 29-251 (330)
244 cd03266 ABC_NatA_sodium_export 100.0 2E-34 4.4E-39 321.3 23.8 198 166-407 19-218 (218)
245 cd03269 ABC_putative_ATPase Th 100.0 1.4E-34 3.1E-39 320.6 22.2 198 165-407 13-210 (210)
246 COG4175 ProV ABC-type proline/ 100.0 5.4E-35 1.2E-39 318.8 18.4 223 164-437 40-269 (386)
247 cd03232 ABC_PDR_domain2 The pl 100.0 2E-34 4.4E-39 314.3 23.1 190 828-1064 3-192 (192)
248 PRK11174 cysteine/glutathione 100.0 1.5E-34 3.2E-39 369.0 25.5 207 165-414 363-572 (588)
249 TIGR03873 F420-0_ABC_ATP propo 100.0 1.9E-34 4.2E-39 329.1 23.9 217 829-1067 2-222 (256)
250 TIGR03410 urea_trans_UrtE urea 100.0 1.9E-34 4.1E-39 324.2 23.3 211 829-1067 1-217 (230)
251 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.4E-34 5.1E-39 325.8 24.3 206 165-413 14-224 (242)
252 COG4988 CydD ABC-type transpor 100.0 6.5E-35 1.4E-39 346.0 20.3 213 825-1066 317-538 (559)
253 PRK13639 cbiO cobalt transport 100.0 2.7E-34 5.9E-39 330.9 24.9 214 829-1066 2-221 (275)
254 PRK13651 cobalt transporter AT 100.0 2.7E-34 5.7E-39 334.1 25.0 205 165-413 20-253 (305)
255 cd03233 ABC_PDR_domain1 The pl 100.0 2.5E-34 5.4E-39 316.0 23.5 180 163-407 18-202 (202)
256 COG0444 DppD ABC-type dipeptid 100.0 3.2E-34 7E-39 320.0 24.5 215 164-413 17-242 (316)
257 PRK13650 cbiO cobalt transport 100.0 2.6E-34 5.6E-39 331.5 24.7 216 165-424 20-242 (279)
258 TIGR01184 ntrCD nitrate transp 100.0 1.5E-34 3.3E-39 324.4 22.0 198 857-1066 1-199 (230)
259 TIGR01277 thiQ thiamine ABC tr 100.0 2.6E-34 5.7E-39 319.0 23.7 198 856-1065 13-212 (213)
260 PRK14235 phosphate transporter 100.0 4.2E-34 9.1E-39 328.0 26.1 220 828-1066 19-246 (267)
261 PRK13646 cbiO cobalt transport 100.0 3.7E-34 8E-39 331.5 25.8 206 165-413 20-234 (286)
262 TIGR00968 3a0106s01 sulfate AB 100.0 3.7E-34 8E-39 322.9 25.1 212 830-1066 2-215 (237)
263 PRK13647 cbiO cobalt transport 100.0 3.1E-34 6.7E-39 330.0 24.9 203 166-412 19-225 (274)
264 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.5E-34 3.2E-39 322.4 21.5 195 165-403 17-218 (218)
265 PRK14256 phosphate ABC transpo 100.0 7.1E-34 1.5E-38 323.9 27.5 220 828-1066 4-231 (252)
266 PRK11022 dppD dipeptide transp 100.0 5.2E-34 1.1E-38 334.7 27.2 220 829-1066 4-238 (326)
267 TIGR03415 ABC_choXWV_ATP choli 100.0 2.4E-34 5.1E-39 340.6 24.3 203 852-1066 35-249 (382)
268 PRK13632 cbiO cobalt transport 100.0 3.2E-34 6.9E-39 329.7 24.8 215 828-1066 7-226 (271)
269 PRK09536 btuD corrinoid ABC tr 100.0 1.8E-34 3.9E-39 344.3 23.3 209 165-413 16-227 (402)
270 PRK11308 dppF dipeptide transp 100.0 4.8E-34 1E-38 334.9 26.5 225 828-1066 5-239 (327)
271 cd03234 ABCG_White The White s 100.0 3.6E-34 7.9E-39 320.8 24.3 204 164-407 19-226 (226)
272 TIGR02315 ABC_phnC phosphonate 100.0 1.9E-34 4.2E-39 326.9 22.2 213 165-412 15-233 (243)
273 PRK13549 xylose transporter AT 100.0 2.6E-34 5.6E-39 359.3 25.4 221 828-1068 5-229 (506)
274 PRK14269 phosphate ABC transpo 100.0 4.5E-34 9.8E-39 324.2 25.0 219 829-1066 3-225 (246)
275 TIGR03608 L_ocin_972_ABC putat 100.0 2.5E-34 5.3E-39 317.7 22.3 189 854-1054 11-206 (206)
276 PRK15079 oligopeptide ABC tran 100.0 3.7E-34 8E-39 336.0 25.0 208 165-413 34-250 (331)
277 cd03268 ABC_BcrA_bacitracin_re 100.0 2.4E-34 5.3E-39 318.2 22.1 195 165-407 13-208 (208)
278 cd03267 ABC_NatA_like Similar 100.0 3.7E-34 8.1E-39 322.6 24.0 201 852-1064 32-236 (236)
279 PRK13648 cbiO cobalt transport 100.0 4.5E-34 9.8E-39 328.3 25.0 215 828-1066 7-226 (269)
280 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.1E-34 1.1E-38 321.8 24.9 206 165-414 14-221 (236)
281 PRK09473 oppD oligopeptide tra 100.0 5.9E-34 1.3E-38 334.5 26.5 224 828-1066 12-246 (330)
282 PRK13633 cobalt transporter AT 100.0 3.5E-34 7.5E-39 330.9 24.1 219 828-1066 4-228 (280)
283 PRK13547 hmuV hemin importer A 100.0 3.6E-34 7.7E-39 328.2 23.7 219 829-1067 2-240 (272)
284 PRK11022 dppD dipeptide transp 100.0 6.6E-34 1.4E-38 333.9 26.5 214 165-414 20-243 (326)
285 COG4181 Predicted ABC-type tra 100.0 1.4E-34 3.1E-39 289.1 17.7 197 852-1061 21-225 (228)
286 PRK00635 excinuclease ABC subu 100.0 1.1E-32 2.5E-37 367.2 41.6 134 925-1066 759-901 (1809)
287 PRK13645 cbiO cobalt transport 100.0 4.1E-34 8.8E-39 332.0 24.3 219 828-1066 6-235 (289)
288 KOG0055 Multidrug/pheromone ex 100.0 1.3E-34 2.7E-39 367.3 21.6 214 158-414 997-1213(1228)
289 cd03299 ABC_ModC_like Archeal 100.0 6.3E-34 1.4E-38 320.6 25.1 199 856-1066 14-214 (235)
290 PRK10771 thiQ thiamine transpo 100.0 4.4E-34 9.6E-39 321.5 23.5 211 829-1066 2-214 (232)
291 PRK14250 phosphate ABC transpo 100.0 3.9E-34 8.5E-39 323.6 23.1 209 828-1066 3-216 (241)
292 cd03257 ABC_NikE_OppD_transpor 100.0 8.7E-34 1.9E-38 318.5 25.8 201 166-407 19-228 (228)
293 PRK13631 cbiO cobalt transport 100.0 4.3E-34 9.4E-39 334.2 24.2 218 165-426 39-280 (320)
294 PRK13640 cbiO cobalt transport 100.0 4.1E-34 8.8E-39 330.4 23.7 217 828-1066 5-227 (282)
295 cd03226 ABC_cobalt_CbiO_domain 100.0 2.2E-34 4.7E-39 317.8 20.3 192 165-404 13-205 (205)
296 PRK14259 phosphate ABC transpo 100.0 6.3E-34 1.4E-38 326.8 24.7 215 827-1066 12-248 (269)
297 PRK14239 phosphate transporter 100.0 8.7E-34 1.9E-38 323.3 25.7 215 828-1066 5-231 (252)
298 PRK15093 antimicrobial peptide 100.0 8.3E-34 1.8E-38 334.2 26.3 222 829-1066 4-243 (330)
299 TIGR02211 LolD_lipo_ex lipopro 100.0 8E-34 1.7E-38 317.2 24.8 196 165-404 18-220 (221)
300 PRK11264 putative amino-acid A 100.0 6.9E-34 1.5E-38 323.7 24.6 205 165-413 16-232 (250)
301 PRK09493 glnQ glutamine ABC tr 100.0 6.7E-34 1.5E-38 321.7 24.2 205 165-413 14-224 (240)
302 PRK14274 phosphate ABC transpo 100.0 9.7E-34 2.1E-38 324.0 25.7 219 828-1066 12-238 (259)
303 PRK00349 uvrA excinuclease ABC 100.0 1.1E-32 2.4E-37 355.3 38.5 123 928-1066 791-922 (943)
304 PRK14244 phosphate ABC transpo 100.0 9.1E-34 2E-38 322.8 25.2 218 830-1066 7-232 (251)
305 PRK14257 phosphate ABC transpo 100.0 1.2E-33 2.6E-38 331.4 26.8 222 827-1066 79-308 (329)
306 PRK14270 phosphate ABC transpo 100.0 1E-33 2.2E-38 322.5 25.4 215 828-1066 4-230 (251)
307 PRK14240 phosphate transporter 100.0 1.1E-33 2.4E-38 322.0 25.7 215 828-1066 3-229 (250)
308 PRK14262 phosphate ABC transpo 100.0 1.1E-33 2.5E-38 321.9 25.7 218 829-1066 4-229 (250)
309 PRK14260 phosphate ABC transpo 100.0 1.1E-33 2.3E-38 323.6 25.5 216 828-1066 7-238 (259)
310 PRK11174 cysteine/glutathione 100.0 1.7E-34 3.6E-39 368.4 21.0 210 827-1066 348-567 (588)
311 cd03267 ABC_NatA_like Similar 100.0 9.8E-34 2.1E-38 319.2 24.7 202 163-407 32-236 (236)
312 PRK13635 cbiO cobalt transport 100.0 7.2E-34 1.6E-38 327.6 24.0 216 165-424 20-242 (279)
313 PRK15112 antimicrobial peptide 100.0 8E-34 1.7E-38 325.7 24.3 223 829-1066 5-234 (267)
314 cd03213 ABCG_EPDR ABCG transpo 100.0 8.9E-34 1.9E-38 309.6 23.5 190 828-1064 3-194 (194)
315 TIGR02142 modC_ABC molybdenum 100.0 7.2E-34 1.6E-38 337.9 24.7 194 859-1066 15-216 (354)
316 cd03297 ABC_ModC_molybdenum_tr 100.0 7.8E-34 1.7E-38 315.5 23.1 191 859-1064 16-214 (214)
317 PRK14236 phosphate transporter 100.0 1.6E-33 3.6E-38 324.0 26.6 220 827-1066 24-251 (272)
318 PRK11144 modC molybdate transp 100.0 8E-34 1.7E-38 336.9 24.7 190 859-1066 16-213 (352)
319 PRK14253 phosphate ABC transpo 100.0 1.2E-33 2.7E-38 321.4 25.1 219 828-1066 3-228 (249)
320 cd03264 ABC_drug_resistance_li 100.0 5.6E-34 1.2E-38 316.0 21.7 197 165-407 13-211 (211)
321 PRK13636 cbiO cobalt transport 100.0 7.8E-34 1.7E-38 328.2 23.7 207 165-414 19-231 (283)
322 COG1245 Predicted ATPase, RNas 100.0 1.1E-32 2.4E-37 312.1 32.3 173 857-1055 357-530 (591)
323 PRK10895 lipopolysaccharide AB 100.0 8.1E-34 1.8E-38 321.3 23.1 206 165-413 16-225 (241)
324 PRK14258 phosphate ABC transpo 100.0 1.7E-33 3.7E-38 322.1 25.9 221 828-1066 7-240 (261)
325 PRK13642 cbiO cobalt transport 100.0 1.1E-33 2.5E-38 326.1 24.4 216 828-1066 4-224 (277)
326 PRK11248 tauB taurine transpor 100.0 1.2E-33 2.5E-38 321.8 24.1 201 165-410 14-216 (255)
327 PRK11308 dppF dipeptide transp 100.0 1.4E-33 3.1E-38 330.9 25.4 208 165-414 28-244 (327)
328 TIGR03410 urea_trans_UrtE urea 100.0 9.5E-34 2.1E-38 318.5 22.8 202 165-412 13-219 (230)
329 PRK11144 modC molybdate transp 100.0 7.5E-34 1.6E-38 337.2 23.1 195 170-413 16-217 (352)
330 PRK11247 ssuB aliphatic sulfon 100.0 8E-34 1.7E-38 322.6 22.3 194 166-410 26-219 (257)
331 PRK13632 cbiO cobalt transport 100.0 1.5E-33 3.2E-38 324.2 24.7 205 165-413 22-230 (271)
332 KOG0066 eIF2-interacting prote 100.0 6E-33 1.3E-37 309.7 28.5 202 825-1066 583-786 (807)
333 PRK13641 cbiO cobalt transport 100.0 9.1E-34 2E-38 328.3 23.0 205 165-413 20-233 (287)
334 PRK10762 D-ribose transporter 100.0 1.1E-33 2.4E-38 353.3 25.3 218 829-1068 5-227 (501)
335 TIGR02770 nickel_nikD nickel i 100.0 9.8E-34 2.1E-38 318.1 22.3 201 856-1066 1-210 (230)
336 cd03292 ABC_FtsE_transporter F 100.0 8.7E-34 1.9E-38 315.3 21.7 195 165-403 14-214 (214)
337 PRK11701 phnK phosphonate C-P 100.0 2E-33 4.3E-38 321.2 25.2 215 828-1066 6-236 (258)
338 PRK14272 phosphate ABC transpo 100.0 2.6E-33 5.6E-38 319.4 26.1 216 828-1066 4-231 (252)
339 COG0444 DppD ABC-type dipeptid 100.0 1.8E-33 3.9E-38 314.0 24.1 224 829-1066 2-238 (316)
340 PRK14249 phosphate ABC transpo 100.0 2.5E-33 5.5E-38 319.1 25.8 219 828-1066 4-230 (251)
341 TIGR02982 heterocyst_DevA ABC 100.0 2E-33 4.3E-38 313.6 24.3 211 829-1060 2-219 (220)
342 PRK13543 cytochrome c biogenes 100.0 1.5E-33 3.3E-38 312.9 23.3 202 828-1056 11-212 (214)
343 PRK14250 phosphate ABC transpo 100.0 2.3E-33 5E-38 317.3 25.1 201 165-413 16-220 (241)
344 TIGR02142 modC_ABC molybdenum 100.0 1.2E-33 2.6E-38 335.9 23.9 199 170-413 15-220 (354)
345 PRK10584 putative ABC transpor 100.0 3.3E-33 7.1E-38 313.7 26.0 198 165-406 23-227 (228)
346 TIGR02673 FtsE cell division A 100.0 1.1E-33 2.4E-38 314.4 22.0 194 165-402 15-214 (214)
347 PRK13548 hmuV hemin importer A 100.0 1.7E-33 3.7E-38 321.3 24.0 206 165-413 15-229 (258)
348 PRK10418 nikD nickel transport 100.0 2.6E-33 5.6E-38 319.4 25.4 214 827-1066 3-225 (254)
349 PRK14261 phosphate ABC transpo 100.0 2.7E-33 5.8E-38 319.3 25.5 219 828-1066 6-232 (253)
350 PRK11614 livF leucine/isoleuci 100.0 1.3E-33 2.7E-38 318.9 22.5 203 165-413 18-225 (237)
351 TIGR01184 ntrCD nitrate transp 100.0 1.2E-33 2.5E-38 317.3 22.1 202 168-412 1-202 (230)
352 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2.1E-33 4.6E-38 313.7 24.1 193 851-1064 32-224 (224)
353 PRK14271 phosphate ABC transpo 100.0 5.3E-33 1.1E-37 320.0 28.0 219 828-1066 21-246 (276)
354 TIGR02769 nickel_nikE nickel i 100.0 2.1E-33 4.6E-38 322.0 24.6 207 164-413 23-239 (265)
355 COG4525 TauB ABC-type taurine 100.0 1.2E-33 2.7E-38 288.1 19.9 205 165-414 18-224 (259)
356 PRK14263 phosphate ABC transpo 100.0 3.5E-33 7.7E-38 318.9 26.2 219 827-1066 7-240 (261)
357 TIGR02770 nickel_nikD nickel i 100.0 1.6E-33 3.4E-38 316.4 22.9 207 167-413 1-214 (230)
358 COG1132 MdlB ABC-type multidru 100.0 2.5E-34 5.3E-39 364.9 18.4 211 827-1066 327-547 (567)
359 PRK09700 D-allose transporter 100.0 1.3E-33 2.8E-38 353.5 24.7 218 828-1067 5-230 (510)
360 PRK14275 phosphate ABC transpo 100.0 2.9E-33 6.3E-38 323.7 25.7 215 828-1066 39-265 (286)
361 PRK14248 phosphate ABC transpo 100.0 2.5E-33 5.4E-38 322.1 24.9 215 828-1066 21-247 (268)
362 PRK14251 phosphate ABC transpo 100.0 3.2E-33 7E-38 318.3 25.5 215 828-1066 4-230 (251)
363 TIGR00972 3a0107s01c2 phosphat 100.0 2.5E-33 5.4E-38 318.4 24.5 207 165-413 14-231 (247)
364 PRK14273 phosphate ABC transpo 100.0 4.1E-33 8.9E-38 318.0 26.3 206 166-413 21-237 (254)
365 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 5.2E-34 1.1E-38 369.5 21.4 209 827-1066 450-668 (686)
366 PRK15093 antimicrobial peptide 100.0 3.2E-33 7E-38 329.2 26.1 217 165-413 20-247 (330)
367 PRK13538 cytochrome c biogenes 100.0 1.7E-33 3.7E-38 310.3 22.2 199 829-1054 2-202 (204)
368 PRK13644 cbiO cobalt transport 100.0 1.7E-33 3.7E-38 323.9 23.1 204 165-413 15-223 (274)
369 TIGR03411 urea_trans_UrtD urea 100.0 2.2E-33 4.7E-38 318.1 23.5 211 165-412 15-229 (242)
370 PRK13652 cbiO cobalt transport 100.0 2.4E-33 5.2E-38 323.4 24.2 205 166-413 18-226 (277)
371 TIGR03005 ectoine_ehuA ectoine 100.0 2.5E-33 5.3E-38 319.4 24.0 206 165-413 13-235 (252)
372 PRK14242 phosphate transporter 100.0 4.8E-33 1E-37 317.3 26.4 210 166-413 20-236 (253)
373 PRK11300 livG leucine/isoleuci 100.0 2.4E-33 5.3E-38 320.2 24.0 221 165-413 18-242 (255)
374 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 7.9E-34 1.7E-38 367.8 22.6 205 165-414 466-673 (686)
375 PRK13633 cobalt transporter AT 100.0 2.8E-33 6E-38 323.3 24.6 205 165-413 23-232 (280)
376 COG4618 ArpD ABC-type protease 100.0 9.5E-34 2.1E-38 326.4 20.5 237 107-416 323-562 (580)
377 cd03231 ABC_CcmA_heme_exporter 100.0 1.5E-33 3.2E-38 309.9 21.3 195 830-1054 2-198 (201)
378 PRK13648 cbiO cobalt transport 100.0 3E-33 6.5E-38 321.5 24.5 204 166-413 23-230 (269)
379 PRK11124 artP arginine transpo 100.0 3.4E-33 7.3E-38 316.4 24.4 204 165-412 15-228 (242)
380 PRK14255 phosphate ABC transpo 100.0 5.5E-33 1.2E-37 316.6 26.2 215 828-1066 5-231 (252)
381 PRK10908 cell division protein 100.0 2.4E-33 5.2E-38 313.4 22.7 196 165-404 15-216 (222)
382 COG1132 MdlB ABC-type multidru 100.0 1.7E-33 3.8E-38 357.2 24.3 208 165-414 342-552 (567)
383 PRK13639 cbiO cobalt transport 100.0 4.5E-33 9.9E-38 320.7 25.4 204 166-413 16-225 (275)
384 PRK15056 manganese/iron transp 100.0 3E-33 6.5E-38 321.9 23.9 218 828-1067 6-226 (272)
385 PRK13649 cbiO cobalt transport 100.0 4.4E-33 9.5E-38 322.2 25.3 205 165-413 20-233 (280)
386 TIGR02633 xylG D-xylose ABC tr 100.0 3.1E-33 6.8E-38 349.5 25.8 220 829-1068 2-227 (500)
387 PRK14268 phosphate ABC transpo 100.0 3.8E-33 8.2E-38 318.8 24.2 206 165-413 25-241 (258)
388 TIGR03740 galliderm_ABC gallid 100.0 3.7E-33 8E-38 312.1 23.5 197 165-410 13-209 (223)
389 PRK14257 phosphate ABC transpo 100.0 5.5E-33 1.2E-37 325.9 26.0 211 165-413 95-312 (329)
390 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.7E-33 5.8E-38 310.6 22.1 195 170-407 16-211 (211)
391 cd03252 ABCC_Hemolysin The ABC 100.0 7.7E-34 1.7E-38 320.7 18.0 211 829-1066 1-220 (237)
392 cd03225 ABC_cobalt_CbiO_domain 100.0 2.3E-33 4.9E-38 311.2 21.4 194 165-402 14-211 (211)
393 cd03300 ABC_PotA_N PotA is an 100.0 5.5E-33 1.2E-37 312.5 24.8 206 165-413 13-219 (232)
394 PRK13638 cbiO cobalt transport 100.0 4.5E-33 9.8E-38 320.4 24.6 205 165-413 14-224 (271)
395 PRK15439 autoinducer 2 ABC tra 100.0 3.1E-33 6.6E-38 349.5 25.1 211 828-1067 11-225 (510)
396 PRK14238 phosphate transporter 100.0 5E-33 1.1E-37 319.7 24.7 215 828-1066 24-250 (271)
397 PRK14254 phosphate ABC transpo 100.0 9.8E-33 2.1E-37 319.0 27.2 213 828-1066 39-264 (285)
398 cd03299 ABC_ModC_like Archeal 100.0 5.4E-33 1.2E-37 313.1 24.3 204 167-413 14-218 (235)
399 PRK10619 histidine/lysine/argi 100.0 4E-33 8.6E-38 318.6 23.6 205 165-413 18-240 (257)
400 PRK10419 nikE nickel transport 100.0 6E-33 1.3E-37 318.5 25.2 224 829-1067 4-237 (268)
401 PRK14247 phosphate ABC transpo 100.0 4.9E-33 1.1E-37 316.6 24.3 213 165-413 16-233 (250)
402 PRK14265 phosphate ABC transpo 100.0 7.3E-33 1.6E-37 318.6 25.7 214 828-1066 20-253 (274)
403 PRK10790 putative multidrug tr 100.0 1.8E-33 4E-38 358.9 22.9 210 827-1066 339-558 (592)
404 cd03235 ABC_Metallic_Cations A 100.0 2.2E-33 4.7E-38 311.8 20.5 200 165-407 12-213 (213)
405 PRK11176 lipid transporter ATP 100.0 1.4E-33 3.1E-38 359.6 21.8 213 827-1066 340-562 (582)
406 PRK10575 iron-hydroxamate tran 100.0 3.8E-33 8.3E-38 319.9 23.1 210 165-413 24-236 (265)
407 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.5E-33 3.2E-38 322.5 19.6 210 828-1066 2-220 (275)
408 CHL00131 ycf16 sulfate ABC tra 100.0 9.3E-33 2E-37 314.8 26.1 220 828-1066 7-236 (252)
409 PRK13640 cbiO cobalt transport 100.0 5.5E-33 1.2E-37 321.0 24.4 208 165-413 20-231 (282)
410 PRK10247 putative ABC transpor 100.0 3.4E-33 7.3E-38 312.6 21.9 203 828-1058 7-214 (225)
411 PRK11288 araG L-arabinose tran 100.0 4.3E-33 9.3E-38 347.9 25.3 216 828-1065 4-223 (501)
412 TIGR01978 sufC FeS assembly AT 100.0 5.3E-33 1.2E-37 315.2 23.5 213 165-413 13-233 (243)
413 PRK11160 cysteine/glutathione 100.0 2E-33 4.4E-38 355.9 22.3 212 827-1066 337-557 (574)
414 PRK13642 cbiO cobalt transport 100.0 1.2E-32 2.6E-37 317.5 26.7 205 165-413 20-228 (277)
415 cd03230 ABC_DR_subfamily_A Thi 100.0 4.1E-33 8.8E-38 299.0 21.1 168 830-1057 2-171 (173)
416 PRK15112 antimicrobial peptide 100.0 5.7E-33 1.2E-37 318.6 23.7 207 165-413 26-238 (267)
417 PRK10253 iron-enterobactin tra 100.0 5.1E-33 1.1E-37 318.9 23.2 209 165-413 20-232 (265)
418 TIGR02323 CP_lyasePhnK phospho 100.0 8.4E-33 1.8E-37 315.3 24.7 215 828-1066 3-233 (253)
419 PRK10771 thiQ thiamine transpo 100.0 6.4E-33 1.4E-37 312.0 23.4 201 170-413 17-218 (232)
420 PRK14243 phosphate transporter 100.0 7.6E-33 1.6E-37 317.1 24.4 218 828-1066 10-243 (264)
421 PRK13645 cbiO cobalt transport 100.0 4.2E-33 9.1E-38 323.5 22.5 205 166-413 25-239 (289)
422 PRK11176 lipid transporter ATP 100.0 2.6E-33 5.5E-38 357.3 22.6 209 165-414 356-567 (582)
423 PRK14246 phosphate ABC transpo 100.0 1.1E-32 2.4E-37 314.1 25.5 216 828-1066 10-236 (257)
424 PRK09984 phosphonate/organopho 100.0 5.1E-33 1.1E-37 318.6 22.7 216 165-412 17-240 (262)
425 PRK10790 putative multidrug tr 100.0 4.6E-33 1E-37 355.3 24.7 206 166-414 355-563 (592)
426 PRK13539 cytochrome c biogenes 100.0 4.4E-33 9.5E-38 307.6 21.2 197 829-1055 3-199 (207)
427 TIGR01166 cbiO cobalt transpor 100.0 3.8E-33 8.2E-38 304.1 20.4 178 854-1041 5-188 (190)
428 PRK14266 phosphate ABC transpo 100.0 9.7E-33 2.1E-37 314.3 24.6 219 828-1066 3-229 (250)
429 PRK14267 phosphate ABC transpo 100.0 7.3E-33 1.6E-37 315.8 23.6 213 165-413 17-236 (253)
430 TIGR00968 3a0106s01 sulfate AB 100.0 9.5E-33 2.1E-37 311.5 24.3 206 165-413 13-219 (237)
431 PRK10418 nikD nickel transport 100.0 1.9E-32 4.2E-37 312.2 26.9 206 166-413 17-229 (254)
432 COG4987 CydC ABC-type transpor 100.0 1.3E-33 2.8E-38 328.7 17.4 211 828-1066 336-556 (573)
433 COG4175 ProV ABC-type proline/ 100.0 1.5E-33 3.3E-38 307.5 16.7 202 854-1067 41-250 (386)
434 TIGR01193 bacteriocin_ABC ABC- 100.0 1.4E-33 3E-38 366.8 19.8 211 827-1066 472-692 (708)
435 PRK10982 galactose/methyl gala 100.0 5.8E-33 1.3E-37 346.1 24.4 206 854-1068 11-220 (491)
436 PRK14237 phosphate transporter 100.0 2.1E-32 4.5E-37 314.0 27.1 211 165-413 33-250 (267)
437 PRK03695 vitamin B12-transport 100.0 7.3E-33 1.6E-37 314.3 22.9 197 856-1066 11-217 (248)
438 PRK10744 pstB phosphate transp 100.0 1.7E-32 3.7E-37 313.7 26.0 210 166-413 27-243 (260)
439 TIGR00630 uvra excinuclease AB 100.0 1.8E-31 3.9E-36 343.6 38.4 123 928-1066 789-920 (924)
440 PRK11231 fecE iron-dicitrate t 100.0 6.1E-33 1.3E-37 316.7 22.2 209 165-413 15-226 (255)
441 TIGR01189 ccmA heme ABC export 100.0 6.8E-33 1.5E-37 304.1 21.8 194 830-1053 2-197 (198)
442 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.5E-33 3.3E-38 366.8 19.6 210 827-1066 476-695 (710)
443 TIGR03873 F420-0_ABC_ATP propo 100.0 8.7E-33 1.9E-37 315.6 23.1 208 165-413 14-225 (256)
444 PRK14252 phosphate ABC transpo 100.0 2.3E-32 4.9E-37 313.7 26.6 216 827-1066 15-244 (265)
445 TIGR01277 thiQ thiamine ABC tr 100.0 1.1E-32 2.4E-37 305.9 23.2 199 167-408 13-212 (213)
446 TIGR03375 type_I_sec_LssB type 100.0 2.2E-33 4.8E-38 364.1 20.4 212 827-1066 462-683 (694)
447 PRK09580 sufC cysteine desulfu 100.0 1.6E-32 3.6E-37 312.1 24.9 219 829-1066 2-230 (248)
448 COG4181 Predicted ABC-type tra 100.0 6.7E-33 1.4E-37 277.1 18.9 202 160-405 18-226 (228)
449 cd03262 ABC_HisP_GlnQ_permease 100.0 5.5E-33 1.2E-37 308.6 20.5 195 165-403 13-213 (213)
450 cd03297 ABC_ModC_molybdenum_tr 100.0 1.1E-32 2.4E-37 306.3 22.9 192 170-407 16-214 (214)
451 PRK14274 phosphate ABC transpo 100.0 2.4E-32 5.2E-37 312.5 26.2 211 165-413 25-242 (259)
452 TIGR00958 3a01208 Conjugate Tr 100.0 2.7E-33 5.8E-38 362.7 20.7 211 827-1066 477-697 (711)
453 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.5E-33 9.8E-38 362.4 23.0 206 165-414 492-700 (710)
454 cd03251 ABCC_MsbA MsbA is an e 100.0 2.6E-33 5.6E-38 315.9 17.9 209 830-1066 2-220 (234)
455 COG4152 ABC-type uncharacteriz 100.0 3.7E-33 8E-38 294.6 17.7 212 160-416 10-221 (300)
456 PRK14245 phosphate ABC transpo 100.0 1.2E-32 2.7E-37 313.3 23.5 210 165-413 16-233 (250)
457 PRK14241 phosphate transporter 100.0 1.4E-32 3E-37 314.3 23.8 212 165-413 17-241 (258)
458 COG4987 CydC ABC-type transpor 100.0 2.8E-33 6E-38 326.0 18.2 202 164-414 350-561 (573)
459 PRK14235 phosphate transporter 100.0 1.4E-32 3.1E-37 315.4 23.9 212 165-413 32-250 (267)
460 PRK14270 phosphate ABC transpo 100.0 1.8E-32 3.8E-37 312.2 24.4 211 165-413 17-234 (251)
461 PRK11701 phnK phosphonate C-P 100.0 1.8E-32 3.8E-37 313.4 24.4 207 165-413 19-240 (258)
462 cd03245 ABCC_bacteriocin_expor 100.0 6.1E-33 1.3E-37 309.8 20.0 209 829-1064 3-220 (220)
463 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3E-33 6.5E-38 316.1 17.7 210 830-1066 2-221 (238)
464 TIGR03375 type_I_sec_LssB type 100.0 8.7E-33 1.9E-37 358.6 24.6 208 165-414 478-688 (694)
465 PRK13546 teichoic acids export 100.0 3.9E-32 8.4E-37 309.8 26.9 219 827-1067 3-228 (264)
466 COG4148 ModC ABC-type molybdat 100.0 1.6E-33 3.5E-38 302.1 14.5 196 170-414 16-218 (352)
467 cd03254 ABCC_Glucan_exporter_l 100.0 3.2E-33 6.9E-38 314.0 17.6 211 828-1066 2-221 (229)
468 COG4618 ArpD ABC-type protease 100.0 1.7E-33 3.7E-38 324.3 15.6 232 818-1078 324-563 (580)
469 KOG0056 Heavy metal exporter H 100.0 2.4E-33 5.3E-38 317.3 16.5 253 87-414 500-761 (790)
470 cd03229 ABC_Class3 This class 100.0 7.2E-33 1.6E-37 298.5 19.5 170 830-1057 2-177 (178)
471 PRK11160 cysteine/glutathione 100.0 8.4E-33 1.8E-37 350.3 23.3 200 166-414 354-562 (574)
472 KOG0056 Heavy metal exporter H 100.0 5.2E-34 1.1E-38 322.7 10.9 217 822-1065 531-755 (790)
473 PRK14239 phosphate transporter 100.0 2.4E-32 5.1E-37 311.5 24.6 211 165-413 18-235 (252)
474 PRK14256 phosphate ABC transpo 100.0 2.4E-32 5.2E-37 311.3 24.7 212 165-413 17-235 (252)
475 PRK14259 phosphate ABC transpo 100.0 2.3E-32 5E-37 313.8 24.4 210 165-414 26-253 (269)
476 TIGR02324 CP_lyasePhnL phospho 100.0 1.8E-32 4E-37 306.8 23.0 210 829-1055 2-223 (224)
477 TIGR00958 3a01208 Conjugate Tr 100.0 8.7E-33 1.9E-37 357.9 23.0 206 165-414 494-702 (711)
478 PRK14269 phosphate ABC transpo 100.0 2.5E-32 5.3E-37 310.0 23.8 212 165-413 15-229 (246)
479 PRK14264 phosphate ABC transpo 100.0 4.1E-32 8.8E-37 316.9 26.0 221 828-1066 45-284 (305)
480 COG4604 CeuD ABC-type enteroch 100.0 8.2E-34 1.8E-38 290.2 10.2 206 852-1067 12-221 (252)
481 cd03213 ABCG_EPDR ABCG transpo 100.0 3.5E-32 7.6E-37 297.1 23.6 170 165-407 22-194 (194)
482 PRK14262 phosphate ABC transpo 100.0 3.1E-32 6.6E-37 310.1 23.8 211 165-413 16-233 (250)
483 PRK09544 znuC high-affinity zi 100.0 2.4E-32 5.2E-37 309.9 22.8 198 828-1066 4-204 (251)
484 PRK14248 phosphate ABC transpo 100.0 8E-32 1.7E-36 309.6 27.4 208 165-413 34-251 (268)
485 TIGR03269 met_CoM_red_A2 methy 100.0 2.7E-32 5.8E-37 342.6 25.5 215 829-1066 1-253 (520)
486 PRK14271 phosphate ABC transpo 100.0 4.5E-32 9.8E-37 312.2 25.2 211 165-413 34-250 (276)
487 PRK13547 hmuV hemin importer A 100.0 3E-32 6.4E-37 312.4 23.4 213 165-413 14-243 (272)
488 PRK14244 phosphate ABC transpo 100.0 3E-32 6.4E-37 310.4 23.3 212 165-413 18-236 (251)
489 PRK14263 phosphate ABC transpo 100.0 2.8E-32 6E-37 311.6 23.0 210 164-413 20-244 (261)
490 PRK13545 tagH teichoic acids e 100.0 4E-32 8.6E-37 325.6 25.1 208 828-1067 21-228 (549)
491 PRK13540 cytochrome c biogenes 100.0 2.4E-32 5.3E-37 300.1 21.3 193 829-1051 2-196 (200)
492 TIGR01193 bacteriocin_ABC ABC- 100.0 8.3E-33 1.8E-37 359.5 20.6 207 166-414 488-697 (708)
493 COG1129 MglA ABC-type sugar tr 100.0 3.2E-32 7E-37 323.2 23.7 227 828-1076 8-241 (500)
494 cd03215 ABC_Carb_Monos_II This 100.0 2.1E-32 4.5E-37 295.9 20.3 159 856-1057 15-180 (182)
495 PRK14240 phosphate transporter 100.0 4.4E-32 9.6E-37 308.8 23.9 210 166-413 17-233 (250)
496 PRK13657 cyclic beta-1,2-gluca 100.0 8.9E-33 1.9E-37 352.2 20.2 211 827-1066 333-553 (588)
497 PRK14272 phosphate ABC transpo 100.0 5.4E-32 1.2E-36 308.6 24.5 208 165-413 17-235 (252)
498 PRK15134 microcin C ABC transp 100.0 4.3E-32 9.3E-37 341.2 25.8 221 828-1066 5-241 (529)
499 PRK14253 phosphate ABC transpo 100.0 3.4E-32 7.3E-37 309.6 22.6 210 165-412 16-231 (249)
500 PRK03695 vitamin B12-transport 100.0 3.7E-32 8.1E-37 308.5 22.9 201 167-413 11-221 (248)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.5e-254 Score=2338.89 Aligned_cols=1321 Identities=53% Similarity=0.917 Sum_probs=1236.8
Q ss_pred cChhHhhhHHHHhhCCChhhhhhcccccC-CCCcceeccCCcChHhhHHHHHHhhhcccccHHHHHHHHHHHHhhcCCCC
Q 000556 36 EDDEEALKWAALEKLPTYNRLRKGLLTTS-RGEAFEVDVSNLGLQQRQRLINKLVKVTEVDNEKFLLKLKSRIDRVGIDL 114 (1426)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1426)
+||||+|||||+|||||++| +++.+. ++ ++|+.+++..+++.++++..+..++|+++++.++++|++++ ++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~ 83 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFES---EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--EL 83 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhccC---cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cC
Confidence 45999999999999999999 555432 22 79999999999999999999999999999999999999998 89
Q ss_pred CccEEEEeceEEEEEEecCCCCCCChhHHHHHHHHHHHhhhccCCCCcccceEeecceEEEeCCeEEEEEcCCCCcHHHH
Q 000556 115 PKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTL 194 (1426)
Q Consensus 115 p~v~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTL 194 (1426)
|.++++++++.+++++..| ||+.|...+.++.+++..+.. ++...+||+|+||.++||||++++||||||||||
T Consensus 84 p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttl 157 (1391)
T KOG0065|consen 84 PTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTL 157 (1391)
T ss_pred CceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHH
Confidence 9999999999999998766 999999999999888766543 5566889999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcC
Q 000556 195 LLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAG 274 (1426)
Q Consensus 195 L~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~ 274 (1426)
||+|+|.++...+..|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|++++.|++ +..|+|++.
T Consensus 158 lkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~- 233 (1391)
T KOG0065|consen 158 LKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA- 233 (1391)
T ss_pred HHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH-
Confidence 9999999998777789999999999999999999999999999999999999999999999999887 555666531
Q ss_pred CCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCC
Q 000556 275 IKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGL 354 (1426)
Q Consensus 275 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgL 354 (1426)
.++|++++++||++|+||+|||+++||+||||||||+||+++++++++++|||+|+||
T Consensus 234 ----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GL 291 (1391)
T KOG0065|consen 234 ----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGL 291 (1391)
T ss_pred ----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeecccccc
Confidence 2689999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHH
Q 000556 355 DSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1426)
Q Consensus 355 Ds~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~ 434 (1426)
|++|+.+|+++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||++
T Consensus 292 DSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt 371 (1391)
T KOG0065|consen 292 DSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLT 371 (1391)
T ss_pred cHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHhhcCCccccccccccccCccccCcHHHHHHHHHHHHHH
Q 000556 435 EVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELL 514 (1426)
Q Consensus 435 ~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l 514 (1426)
++++++++.++|..+..|+.+.+++|+.+.|..++.++++..+++.+.++.+.++.++..++|..+.|+|+++|+.|+++
T Consensus 372 ~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~ 451 (1391)
T KOG0065|consen 372 EVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFL 451 (1391)
T ss_pred HhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhccCCC
Q 000556 515 LMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRF 594 (1426)
Q Consensus 515 ~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~ 594 (1426)
+++||.+++++++++.+++|+++|++|+++.+ ++..+...+.|++||++++.+|++++++++.++++|||+|||+..|
T Consensus 452 l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~f 529 (1391)
T KOG0065|consen 452 LMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSF 529 (1391)
T ss_pred HHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhcccc
Confidence 99999999999999999999999999999885 5566788899999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhccc----
Q 000556 595 FPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTF---- 670 (1426)
Q Consensus 595 y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~---- 670 (1426)
|++||+.++.+++++|..++++++|.+|+||++|+.+++++||.|++++++.+++++++||+++++++++..|+.+
T Consensus 530 Y~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~ 609 (1391)
T KOG0065|consen 530 YPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGIL 609 (1391)
T ss_pred cChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred --------------ccccccchhhhhhcHHHHHHHHHHHHHhcCCccccc------------CCC---CccchhHHHhhc
Q 000556 671 --------------EDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKF------------TPN---SYESIGVQVLKS 721 (1426)
Q Consensus 671 --------------~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~------------~~~---~~~~~g~~~L~~ 721 (1426)
.+||+||+|++|++|++|+++++++|||++.+|.|. ... ...+.|.++++.
T Consensus 610 ~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g 689 (1391)
T KOG0065|consen 610 LLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSG 689 (1391)
T ss_pred HHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEec
Confidence 789999999999999999999999999999999997 111 135678899998
Q ss_pred cCcc-----ccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCccc
Q 000556 722 RGFF-----AHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDIS 796 (1426)
Q Consensus 722 ~~~~-----~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1426)
+++. ....|+|+++|+++||.++|++.+++++.|+++..+.++.+..+........... ... ....
T Consensus 690 ~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~-------~~~--~~~~ 760 (1391)
T KOG0065|consen 690 RDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSA-------GSS--SEIE 760 (1391)
T ss_pred ccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhc-------ccc--cccc
Confidence 8888 7788999999999999999999999999999999888877654433221111000 000 0000
Q ss_pred CCCCCcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccC
Q 000556 797 GRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVS 876 (1426)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~s 876 (1426)
......+.+++++..|+.|..++++||.|.+++|-+++.+| +++++|+||||.++||.++||||+|
T Consensus 761 -----------~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~S 826 (1391)
T KOG0065|consen 761 -----------KLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGES 826 (1391)
T ss_pred -----------ccccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCC
Confidence 00001111345778899999999999999999999888776 6788999999999999999999999
Q ss_pred CCchhHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHH
Q 000556 877 GAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFI 956 (1426)
Q Consensus 877 GaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v 956 (1426)
|||||||||+||||+++|.++|+|+|||+|+++..++|.+|||+|+|+|.|.+||+|.|.|+|+||+|.+++.+++.++|
T Consensus 827 GAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yV 906 (1391)
T KOG0065|consen 827 GAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYV 906 (1391)
T ss_pred CCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHH
Confidence 99999999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCC-CeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEE
Q 000556 957 EEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVC 1035 (1426)
Q Consensus 957 ~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p-~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~ 1035 (1426)
|+|++.++|++++|.+||.|| +|||++|||||+||+||++|| .||||||||||||++++..|++++|+++++|+||||
T Consensus 907 e~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlC 985 (1391)
T KOG0065|consen 907 EEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILC 985 (1391)
T ss_pred HHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEE
Confidence 999999999999999999999 999999999999999999999 899999999999999999999999999999999999
Q ss_pred EecCCCHHHHhhcceEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcccCCCCCCccceEEEeccccchhhcccCHHHH
Q 000556 1036 TIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVEKIKDGYNPATWMLEVTASSQEVALGVDFNDI 1115 (1426)
Q Consensus 1036 ~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~~~~~~~~~yf~~~~~~~~~~~~~npa~~~l~v~~~~~~~~~~~~~~~~ 1115 (1426)
|+||||.++|+.||++++|++||++||+||.|++++++++||++++|++ |++..||||||||+++.+.+.+.+.||+++
T Consensus 986 TIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~ 1064 (1391)
T KOG0065|consen 986 TIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEI 1064 (1391)
T ss_pred EecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHH
Confidence 9999999999999999999999999999999999999999999999885 555559999999999999888889999999
Q ss_pred HHhcHHHHHHHHHHHHhcCCCCC-CCCCCCCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhcc
Q 000556 1116 FRCSELYRRNKALIEELSKPTPG-SKDLYFPTQYSQSAFTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWD 1194 (1426)
Q Consensus 1116 ~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~ 1194 (1426)
|++|++++++++++++++.+.++ ..+..++++|++|+|.|++.|+|||+++|||+|+|+++|++++++.||++|++||+
T Consensus 1065 w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~ 1144 (1391)
T KOG0065|consen 1065 WKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWK 1144 (1391)
T ss_pred HhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeee
Confidence 99999999999999999999988 88888999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhhHHHHHhHHHHHHHHHHHHhhhhcchhhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhh
Q 000556 1195 MGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVI 1274 (1426)
Q Consensus 1195 ~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~v~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i 1274 (1426)
+|+ ++||++|.+|++|+++++.+.+++..++|.+..||.++||||++||||+.+|++||+++|+||+++++++|.+|
T Consensus 1145 ~g~---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~ 1221 (1391)
T KOG0065|consen 1145 VGH---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLI 1221 (1391)
T ss_pred cCC---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhhee
Confidence 994 68999999999999999999999888889999999999999999999999999999999999999999999999
Q ss_pred eecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccC
Q 000556 1275 VYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWAN 1354 (1426)
Q Consensus 1275 ~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~is 1354 (1426)
+|+|+||++++.+|+||++++++..+|++++|||+++++||.++|+++++++++++++||||++|++.||.||+||||+|
T Consensus 1222 ~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~ls 1301 (1391)
T KOG0065|consen 1222 TYYPIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLS 1301 (1391)
T ss_pred eeeeccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcccccC----------CCCcHHHHHHhhcC----CccCchhhHHHHHHHHHHHHHHHHHHHHHh
Q 000556 1355 PVAWTLYGLIASQFGDVEDQME----------NGETVKHFLRDYFG----FKHDFLGLVAGVLTCFVALFGFVFALGIKQ 1420 (1426)
Q Consensus 1355 p~~y~~~~l~~~~~~~~~~~~~----------~g~~~~~~~~~~~g----~~~~~~~~~~~il~~~~~~f~~~~~~~l~~ 1420 (1426)
|++|.++|++..++||.+..|. +|+||++|++.+|| |.++.......+..+|.+++.+++.+++|+
T Consensus 1302 P~ty~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~~l~~f~~~y 1381 (1391)
T KOG0065|consen 1302 PVTYTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVADAFLAAFNIKY 1381 (1391)
T ss_pred cHHHHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehHHHHHHHHHHHH
Confidence 9999999999999999999883 45799999999999 999999888889999999999999999999
Q ss_pred hcccCC
Q 000556 1421 LNFQRR 1426 (1426)
Q Consensus 1421 ~~~~~r 1426 (1426)
.|+|||
T Consensus 1382 ~~~wrn 1387 (1391)
T KOG0065|consen 1382 LNFWRN 1387 (1391)
T ss_pred HHHHHh
Confidence 999987
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.1e-235 Score=2338.88 Aligned_cols=1421 Identities=60% Similarity=1.047 Sum_probs=1263.0
Q ss_pred CCCcccccccccccccccccCCccccccc---C----CccChhHhhhHHHHhhCCChhhhhhcccccC-----CCC---c
Q 000556 4 SHDSYLASTSLRGNISRWRTSSVGAFSKS---L----REEDDEEALKWAALEKLPTYNRLRKGLLTTS-----RGE---A 68 (1426)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~ 68 (1426)
.||+..++-+.+.+.++|.. +++|++. + ..|||||+|+|||+||||||+|+|++++.+. .|+ .
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (1470)
T PLN03140 4 RGGSMRRSISRSVSRSSRNM--EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLH 81 (1470)
T ss_pred CcccHHHHHHHHhhhhhhhh--hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccc
Confidence 45555555444444456744 6888542 1 2678999999999999999999999999652 122 2
Q ss_pred ceeccCCcChHhhHHHHHHhhhcccccHHHHHHHHHHHHhhcCCCCCccEEEEeceEEEEEEecCCCCCCChhHHHHHHH
Q 000556 69 FEVDVSNLGLQQRQRLINKLVKVTEVDNEKFLLKLKSRIDRVGIDLPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVF 148 (1426)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~v~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~ 148 (1426)
.|+|+++|+.++++.+++++++++++|+++|++++++|+|++|+++|++||||+||+|++++.++++++||++|.+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~ 161 (1470)
T PLN03140 82 KEVDVTKLDGNDRQKFIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIA 161 (1470)
T ss_pred cccccccCChHHHHHHHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHH
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCCCCcccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceE
Q 000556 149 EDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTA 228 (1426)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~ 228 (1426)
+.+.+.++..++++.+++||+|+||.++|||+++|+||||||||||||+|+|+++++.+++|+|+|||+++++..+++.+
T Consensus 162 ~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i 241 (1470)
T PLN03140 162 ESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTS 241 (1470)
T ss_pred HHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhccccee
Confidence 88876555444555678899999999999999999999999999999999999988777899999999998877667889
Q ss_pred EEecCCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCC
Q 000556 229 AYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL 308 (1426)
Q Consensus 229 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL 308 (1426)
+||+|+|.|++++||+|||.|+++|++.+.++++..+..+++++.++.|+.++|.+|++.+.++.+.+..++++|+.+||
T Consensus 242 ~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL 321 (1470)
T PLN03140 242 AYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGL 321 (1470)
T ss_pred EEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCC
Confidence 99999999999999999999999998877766666667778888888888888999999988888888899999999999
Q ss_pred cccccccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhH
Q 000556 309 EVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPET 388 (1426)
Q Consensus 309 ~~~~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~ 388 (1426)
++|+||.||++++++|||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.+++
T Consensus 322 ~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i 401 (1470)
T PLN03140 322 DICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPET 401 (1470)
T ss_pred ccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998766789999999999999
Q ss_pred HhhcCeEEEecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhc
Q 000556 389 YDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSF 468 (1426)
Q Consensus 389 ~~~fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (1426)
+++||+|++|++|+++|+||++++.+||+++||+||+++|+|||+++++++++++++|.....|+++.++++++++|+++
T Consensus 402 ~~lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s 481 (1470)
T PLN03140 402 FDLFDDIILLSEGQIVYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSF 481 (1470)
T ss_pred HHHhheEEEeeCceEEEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999988888887776777778999999999999
Q ss_pred ccchhhHHhhcCCccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 000556 469 HVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHK 548 (1426)
Q Consensus 469 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~ 548 (1426)
+.++++.++++.|.++...++.....++|..++++|+++|++|++++++||+..+++++++.+++|+++|++|++++++.
T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~ 561 (1470)
T PLN03140 482 HVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHT 561 (1470)
T ss_pred HHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99988888877776665556666666789999999999999999999999999999999999999999999999987665
Q ss_pred CcccccchhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccc
Q 000556 549 HSLTDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIG 628 (1426)
Q Consensus 549 ~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g 628 (1426)
.+..++..+.|++||++++.++++++++++++.+||||+|||+.+||++|+|+++++++++|+.++++++|++++|||+|
T Consensus 562 ~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~G 641 (1470)
T PLN03140 562 RNEEDGALYIGALLFSMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIG 641 (1470)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Confidence 55556778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhccc------------------ccccccchhhhhhcHHHHHH
Q 000556 629 CDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTF------------------EDIKKWWKWAYWCSPMSYAQ 690 (1426)
Q Consensus 629 l~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~------------------~~ip~~~~W~~~isp~~y~~ 690 (1426)
+.+++++||.|++++++++++++++|++++++++++.+|+.+ ++||+||+|++|+||++|++
T Consensus 642 l~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~ 721 (1470)
T PLN03140 642 FAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGF 721 (1470)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHH
Confidence 999999999999999999999999999999999999988755 78999999999999999999
Q ss_pred HHHHHHHhcCCcccccC-CCCccchhHHHhhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeecc
Q 000556 691 NAIVANEFLGYSWKKFT-PNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEE 769 (1426)
Q Consensus 691 ~al~~nef~~~~~~~~~-~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~ 769 (1426)
+|+++|||.+.+|.+.. .+...+.|.++|+.+++...+.|+|+++++|++++++|+++++++++|.++.....+.+..+
T Consensus 722 eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~ 801 (1470)
T PLN03140 722 NALAVNEMFAPRWMNKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEE 801 (1470)
T ss_pred HHHHHHhccCccccCcccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCcccccc
Confidence 99999999999887432 23346789999999999998899999999999999999999999999998766655544222
Q ss_pred ccccccccc-cc-cccccccCCC--CCCc--ccCCCC-CcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecch
Q 000556 770 SESNKQDNR-IR-GTVQLSARGE--SGED--ISGRNS-SSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQ 842 (1426)
Q Consensus 770 ~~~~~~~~~-~~-~~~~~~~~~~--~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~ 842 (1426)
......... .. .......... .... ...... ................++++.+|+.|..++|+||+|.++.+.
T Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~ 881 (1470)
T PLN03140 802 TAEEMEGEEDSIPRSLSSADGNNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPA 881 (1470)
T ss_pred chhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCc
Confidence 111000000 00 0000000000 0000 000000 000000000000122345667788999999999999999887
Q ss_pred hhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeccC
Q 000556 843 EMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQN 922 (1426)
Q Consensus 843 ~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~ 922 (1426)
+++..+..++++.+|+|||+.++||+++||||||||||||||++|+|+.+++..+|+|.+||.+..+..+++.+|||+|+
T Consensus 882 ~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~ 961 (1470)
T PLN03140 882 EMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQN 961 (1470)
T ss_pred cccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccc
Confidence 66555555566789999999999999999999999999999999999987777899999999987655567789999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeE
Q 000556 923 DIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1002 (1426)
Q Consensus 923 ~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iL 1002 (1426)
|.+++.+||+|+|.|++.+|.+.+.+.++++++++++++.+||.+++|+.+|.+++++|||||||||+||++|+++|+||
T Consensus 962 d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL 1041 (1470)
T PLN03140 962 DIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSII 1041 (1470)
T ss_pred cccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999999999999888776666677778899999999999999999999888899999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCCcchhHHHHHHHhCCC
Q 000556 1003 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPG 1082 (1426)
Q Consensus 1003 lLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~~~~~~~~~yf~~~~~ 1082 (1426)
||||||+|||+.++..+++.|++++++|+|||||+|||+.++++.||++++|++||+++|+||.+++++++++||++++|
T Consensus 1042 ~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g 1121 (1470)
T PLN03140 1042 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPG 1121 (1470)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCC
Confidence 99999999999999999999999998899999999999988899999999999889999999999988999999999988
Q ss_pred cccCCCCCCccceEEEeccccchhhcccCHHHHHHhcHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCHHHHHHHHHHH
Q 000556 1083 VEKIKDGYNPATWMLEVTASSQEVALGVDFNDIFRCSELYRRNKALIEELSKPTPGSKDLYFPTQYSQSAFTQFMACLWK 1162 (1426)
Q Consensus 1083 ~~~~~~~~npa~~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R 1162 (1426)
+++||+++||||||+|+++.+.+...+.||++.|++|++++++++.+++++.+.++.++..++++|++|+|+|++.|+||
T Consensus 1122 ~~~~p~~~NPAd~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R 1201 (1470)
T PLN03140 1122 VPKIKEKYNPATWMLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWK 1201 (1470)
T ss_pred CCCCCCCCCchhhhhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHH
Confidence 88899999999999999987766566679999999999999998888888777666666666788999999999999999
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHhHhhccCCCCCCChhhHHHHHhHHHHHHHHHHHHhhhhcchhhhhhhhHHHhhh
Q 000556 1163 QHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREK 1242 (1426)
Q Consensus 1163 ~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~v~~~~~~er~v~~rE~ 1242 (1426)
+++++||||.|+.+|+++++++||++|++||+++++..+++++++++|++|++++|+++.++++++|.+..||+||+|||
T Consensus 1202 ~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr 1281 (1470)
T PLN03140 1202 QWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRER 1281 (1470)
T ss_pred HHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998777789999999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 000556 1243 AAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIV 1322 (1426)
Q Consensus 1243 ~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~ 1322 (1426)
++|||++++|++|++++|+||.++++++|++|+|||+||++++.+||||+++++++.++++++|+++++++||.++|+++
T Consensus 1282 ~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~ 1361 (1470)
T PLN03140 1282 AAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIF 1361 (1470)
T ss_pred hcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHHhCCcccccC-C----CCcHHHHHHhhcCCccCchh
Q 000556 1323 STLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQME-N----GETVKHFLRDYFGFKHDFLG 1397 (1426)
Q Consensus 1323 ~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~-~----g~~~~~~~~~~~g~~~~~~~ 1397 (1426)
+++++++|++||||++|+++||+||+|+||+||++|+++|+++|||+|.+..|+ + ++++++|++++|||+++++|
T Consensus 1362 ~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 1441 (1470)
T PLN03140 1362 AAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMG 1441 (1470)
T ss_pred HHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCccccc
Confidence 999999999999999999999999999999999999999999999999887653 2 36899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 000556 1398 LVAGVLTCFVALFGFVFALGIKQLNFQRR 1426 (1426)
Q Consensus 1398 ~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1426 (1426)
++++++++|+++|++++++++|++|||||
T Consensus 1442 ~~~~il~~~~~~f~~~~~~~~~~~~~q~r 1470 (1470)
T PLN03140 1442 PVAAVLVGFTVFFAFIFAFCIRTLNFQTR 1470 (1470)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHhhcccC
Confidence 99999999999999999999999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=8.2e-185 Score=1857.58 Aligned_cols=1272 Identities=31% Similarity=0.542 Sum_probs=1048.6
Q ss_pred cccHHHHHHHHHHHHhhcCCCCC--ccEEEEeceEEEEEEecCCCCCCChhHHHHHHHHHHHhhhccCCCCcccceEeec
Q 000556 93 EVDNEKFLLKLKSRIDRVGIDLP--KVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKD 170 (1426)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~p--~v~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 170 (1426)
+.|++++++.++++.++.+...| +++|+|+||+|++. ..+...+||++|.+.+.+..+...+. ..+++++++||+|
T Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~-~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~ 79 (1394)
T TIGR00956 2 EFNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYGV-AADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKP 79 (1394)
T ss_pred CCCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEEE-eccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeC
Confidence 35778888877777777777667 99999999999993 44666789999998887775543321 1234456789999
Q ss_pred ceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCCHHHHH
Q 000556 171 VSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL-KVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMTVRETL 247 (1426)
Q Consensus 171 vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l 247 (1426)
||+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.+||+++++.. .++.++||+|+|.|++.+||+|||
T Consensus 80 vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l 159 (1394)
T TIGR00956 80 MDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETL 159 (1394)
T ss_pred CEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHH
Confidence 999999999999999999999999999999974321 25999999999875432 245699999999999999999999
Q ss_pred HHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChh
Q 000556 248 AFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGG 327 (1426)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGG 327 (1426)
.|+++++.+..+... ..+. +..+..++.+++.+||++++||.||++.+++||||
T Consensus 160 ~f~~~~~~~~~~~~~---~~~~-----------------------~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 213 (1394)
T TIGR00956 160 DFAARCKTPQNRPDG---VSRE-----------------------EYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGG 213 (1394)
T ss_pred HHHHHhCCCCCCCCC---CCHH-----------------------HHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcc
Confidence 999887643211000 0000 00122356789999999999999999999999999
Q ss_pred HhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEec
Q 000556 328 ERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1426)
Q Consensus 328 qrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~~G 407 (1426)
|||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|+++|+|
T Consensus 214 erkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G 293 (1394)
T TIGR00956 214 ERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFG 293 (1394)
T ss_pred cchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEEC
Confidence 99999999999999999999999999999999999999999987667899999999999999999999999999999999
Q ss_pred ChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHhhcCCcccc--
Q 000556 408 PRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRTPFDKS-- 485 (1426)
Q Consensus 408 ~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 485 (1426)
+++++.+||+++||+||++.|+|||+++++++.++ +++...+. ....++++++++|+.++.++++..+++.+.+..
T Consensus 294 ~~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~e~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 371 (1394)
T TIGR00956 294 PADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGYEK-KVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSE 371 (1394)
T ss_pred CHHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccccc-cCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999987543 22221111 123578999999999987776665544321110
Q ss_pred -------------ccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccc
Q 000556 486 -------------KSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLT 552 (1426)
Q Consensus 486 -------------~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~ 552 (1426)
...+.....++|..++|+|+++|++|+++.++||+..++.++++.+++|+++|++|++.+.+. .
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~ 448 (1394)
T TIGR00956 372 SDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---S 448 (1394)
T ss_pred hhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---h
Confidence 000112234568899999999999999999999999999999999999999999999776432 3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCC
Q 000556 553 DGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPN 632 (1426)
Q Consensus 553 ~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~ 632 (1426)
+.+.+.|++||++++.++.++.+++.++.+|++|+|||..++|++++|+++++++++|+.++.+++|.+++|||+|+.++
T Consensus 449 ~~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~ 528 (1394)
T TIGR00956 449 DFYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRT 528 (1394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCccc
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhccc------------------ccccccchhhhhhcHHHHHHHHHH
Q 000556 633 AGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTF------------------EDIKKWWKWAYWCSPMSYAQNAIV 694 (1426)
Q Consensus 633 ~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~------------------~~ip~~~~W~~~isp~~y~~~al~ 694 (1426)
+++||.|+++++++++++.+++++++++++++.+|+.+ ++||+||+|++|+||+.|++++++
T Consensus 529 ~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~ 608 (1394)
T TIGR00956 529 AGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLM 608 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999999887654 789999999999999999999999
Q ss_pred HHHhcCCcccccC--C----------------------CCccchhHHHhhccCccccchHHHHHHHHHHHHHHHHHHHHH
Q 000556 695 ANEFLGYSWKKFT--P----------------------NSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFT 750 (1426)
Q Consensus 695 ~nef~~~~~~~~~--~----------------------~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~ 750 (1426)
+|||.+..+.|.. | +.....|.++|.. ++.....|+|.+++++++++++|.++.+
T Consensus 609 ~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~ 687 (1394)
T TIGR00956 609 VNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYI 687 (1394)
T ss_pred HhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHH
Confidence 9999999988741 1 1123578899984 3333466899999999999999999999
Q ss_pred HHHHhccccCCCcceeeccccccccccccccccccccCCCCCCcccCCCCCcchhhhhcccCCCCCCCCccccCCCceeE
Q 000556 751 MAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLT 830 (1426)
Q Consensus 751 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 830 (1426)
++++|.++.......+..+............ +......+.++...... .. ...+.+... .............++
T Consensus 688 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~e~~~~~~~-~~--~~~~~~~~~-~~~~~~~~~~~~~l~ 761 (1394)
T TIGR00956 688 LLTEFNKGAKQKGEILVFRRGSLKRAKKAGE--TSASNKNDIEAGEVLGS-TD--LTDESDDVN-DEKDMEKESGEDIFH 761 (1394)
T ss_pred HHHHhccccCCCCceEeeccccccchhhccc--ccccccccccccccCCC-Cc--ccccccccc-ccccccccCCCceEE
Confidence 9999988655443332211100000000000 00000000000000000 00 000000000 000000001123579
Q ss_pred EeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc-eEEEEEEEcCccCCc
Q 000556 831 FDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYPKKQ 909 (1426)
Q Consensus 831 ~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~ 909 (1426)
|+|++|.++.+ .+++.+|+|||++++|||++||||||||||||||++|+|+.+++ ..+|+|.+||.+...
T Consensus 762 ~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~ 832 (1394)
T TIGR00956 762 WRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS 832 (1394)
T ss_pred EEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh
Confidence 99999988532 12457999999999999999999999999999999999997644 456999999998753
Q ss_pred ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000556 910 ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRL 989 (1426)
Q Consensus 910 ~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl 989 (1426)
.+++.+|||+|+|.+++.+||+|+|.|++.+|.|.+.+.++++++++++++.++|.+++|+.+|.++ .+|||||||||
T Consensus 833 -~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~-~~LSgGqrqRl 910 (1394)
T TIGR00956 833 -SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPG-EGLNVEQRKRL 910 (1394)
T ss_pred -hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCC-CCCCHHHhhHH
Confidence 4677899999999999999999999999999877666677777889999999999999999998764 38999999999
Q ss_pred HHHHHHhhCCC-eEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCCc
Q 000556 990 TIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGR 1068 (1426)
Q Consensus 990 ~iA~~L~~~p~-iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~~ 1068 (1426)
+||+||+.+|+ ||||||||||||+.++..+++.|++++++|+|||+|+|||+..+++.||++++|++||+++|+|+.++
T Consensus 911 ~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 911 TIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 99999999997 99999999999999999999999999888999999999999777899999999998889999999998
Q ss_pred chhHHHHHHHhCCCcccCCCCCCccceEEEeccccchhhcccCHHHHHHhcHHHHHHHHHHHHhcCCCCCCC---CCCCC
Q 000556 1069 HSCQLISYFEAIPGVEKIKDGYNPATWMLEVTASSQEVALGVDFNDIFRCSELYRRNKALIEELSKPTPGSK---DLYFP 1145 (1426)
Q Consensus 1069 ~~~~~~~yf~~~~~~~~~~~~~npa~~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~~~ 1145 (1426)
+++++++||+++ |.++||+++|||||++|+++.+.+.....||.+.|++|+++++..+.++++..+..... +....
T Consensus 991 ~~~~~~~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1394)
T TIGR00956 991 NSHTIINYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDAL 1069 (1394)
T ss_pred ccchHHHHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccc
Confidence 889999999986 55679999999999999998755444456899999999998887766655543322111 11122
Q ss_pred CccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhccCCCCCCChhhHHHHHhHHHHHHHHHHHHhhh
Q 000556 1146 TQYSQSAFTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCS 1225 (1426)
Q Consensus 1146 ~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~ 1225 (1426)
++|+.|+|+|+++|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+++++.++.+ .
T Consensus 1070 ~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~~-~ 1145 (1394)
T TIGR00956 1070 SKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPLI-Q 1145 (1394)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 4789999999999999999999999999999999999999999999999986 47899999999999988877763 4
Q ss_pred hcchhhhhhhhHH-HhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchhH-------HHHHHHHHHH
Q 000556 1226 SVQPVVSVERTVF-YREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEK-------FSWYFFFMYI 1297 (1426)
Q Consensus 1226 ~v~~~~~~er~v~-~rE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~-------f~~~~~~~~~ 1297 (1426)
+++|.+..||.+| +|||++|+|++.+|++|++++|+|+.++.+++|++|+|||+||++++.. |++|++++++
T Consensus 1146 ~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~ 1225 (1394)
T TIGR00956 1146 QYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTM 1225 (1394)
T ss_pred HhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHH
Confidence 5667788888886 9999999999999999999999999999999999999999999988876 9999999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHHhCCcccccC-
Q 000556 1298 TLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQME- 1376 (1426)
Q Consensus 1298 ~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~- 1376 (1426)
+.++++++|+++++++||.++|+.+++++++++++||||++|+++||.||+|+||+||++|+++|++.|||+|.+..|.
T Consensus 1226 ~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~ 1305 (1394)
T TIGR00956 1226 FFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKV 1305 (1394)
T ss_pred HHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987773
Q ss_pred ---------CCCcHHHHH-------------------------------HhhcCCccCchhhHHHHHHHHHHHHHHHHHH
Q 000556 1377 ---------NGETVKHFL-------------------------------RDYFGFKHDFLGLVAGVLTCFVALFGFVFAL 1416 (1426)
Q Consensus 1377 ---------~g~~~~~~~-------------------------------~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~ 1416 (1426)
+|+||++|+ ...+|+++++.|+|++++++|++++ +++++
T Consensus 1306 ~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~~w~~~~i~~~~~~~~-~~~~~ 1384 (1394)
T TIGR00956 1306 KELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSGRWRNFGIFIAFIFFN-IIATV 1384 (1394)
T ss_pred cccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccccccchhhhhHHHHHH-HHHHH
Confidence 245665442 2356889999999999999999988 77778
Q ss_pred HHHhh
Q 000556 1417 GIKQL 1421 (1426)
Q Consensus 1417 ~l~~~ 1421 (1426)
++.+.
T Consensus 1385 ~l~~~ 1389 (1394)
T TIGR00956 1385 FFYWL 1389 (1394)
T ss_pred hhheE
Confidence 87765
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.4e-95 Score=907.67 Aligned_cols=574 Identities=31% Similarity=0.561 Sum_probs=504.4
Q ss_pred CceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc-eEEEEEEEcC
Q 000556 826 PHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISG 904 (1426)
Q Consensus 826 ~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g 904 (1426)
+..+.|+|+++..+.+.. ..+++|+||||+++|||++||||||||||||||++|+||..++ ..+|+|++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG 94 (613)
T KOG0061|consen 23 PVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNG 94 (613)
T ss_pred cceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECC
Confidence 457899999998865421 3468999999999999999999999999999999999998764 7899999999
Q ss_pred ccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 905 YPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 905 ~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
++.....+++.+|||.|+|.++|++||+|+|.|+|.+|+|...+.++++++|+++++.+||.+++|+++|.++.+|+|||
T Consensus 95 ~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGG 174 (613)
T KOG0061|consen 95 RPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGG 174 (613)
T ss_pred ccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCccccc
Confidence 88888889999999999999999999999999999999999889999999999999999999999999999988999999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
|||||+||.+|++||+||||||||||||+.++..++++|+++|++|||||||+|||+.+++++||++++|.+ |+++|+|
T Consensus 175 ErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~G 253 (613)
T KOG0061|consen 175 ERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYSG 253 (613)
T ss_pred hhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred CCCcchhHHHHHHHhCCCcccCCCCCCccceEEEecccc-chhhcccCHHHHHHhcH------HHHHHHH-HHHHhcCCC
Q 000556 1065 PLGRHSCQLISYFEAIPGVEKIKDGYNPATWMLEVTASS-QEVALGVDFNDIFRCSE------LYRRNKA-LIEELSKPT 1136 (1426)
Q Consensus 1065 ~~~~~~~~~~~yf~~~~~~~~~~~~~npa~~~l~v~~~~-~~~~~~~~~~~~~~~s~------~~~~~~~-~~~~~~~~~ 1136 (1426)
+. +++.+||+++| . +||+++|||||++|+.+.. .... -.+..+.++... ...+... ..+.+..
T Consensus 254 ~~----~~~~~ff~~~G-~-~~P~~~Npadf~l~l~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 324 (613)
T KOG0061|consen 254 SP----RELLEFFSSLG-F-PCPELENPADFLLDLLSVDSGTRE-LEEAVRIAKLINKFSQTDNLKKTLEALEKSLST-- 324 (613)
T ss_pred CH----HHHHHHHHhCC-C-CCCCcCChHHHHHHHHccCCCchh-HHhHHHHHHHhhhccccchhhhhHHHHhhhccc--
Confidence 97 68999999985 3 5999999999999998742 1000 001111111110 0111100 0011111
Q ss_pred CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhccCCCCCCChhhHHHHHhHHHHHH
Q 000556 1137 PGSKDLYFPTQYSQSAFTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAI 1216 (1426)
Q Consensus 1137 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~ 1216 (1426)
.+. .+.....+||.|++.+++|.+++.+|||.+...|+++.+++|+++|++||+++++ ..+++++.|++|+.+
T Consensus 325 --~~~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~g~~~~~~ 397 (613)
T KOG0061|consen 325 --SKK--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGND---AKGIQNRLGLFFFIL 397 (613)
T ss_pred --ccc--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCc---hHHHHHHHHHHHHHH
Confidence 111 1111278999999999999999999999999999999999999999999999763 566779999999999
Q ss_pred HHHHHHhhhhcchhhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchhHHHHHHHHHH
Q 000556 1217 IFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMY 1296 (1426)
Q Consensus 1217 ~~~~~~~~~~v~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1296 (1426)
.++.+..+...++.|+.||++|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++..+|++|+++++
T Consensus 398 ~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~ 477 (613)
T KOG0061|consen 398 SFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIIL 477 (613)
T ss_pred HHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Confidence 99988888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHHhCCcccccC
Q 000556 1297 ITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQME 1376 (1426)
Q Consensus 1297 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~ 1376 (1426)
+..+.+.++|++++++.||...|..+++++...+++|+||+++.++||.||+|++|+|+++|++||++.|||++....|.
T Consensus 478 ~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~ 557 (613)
T KOG0061|consen 478 LSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCF 557 (613)
T ss_pred HHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997333332
Q ss_pred -C-----CCcHHHHHHhhcCCccCchhhHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 000556 1377 -N-----GETVKHFLRDYFGFKHDFLGLVAGVLTCFVALFGFVFALGIKQLNFQR 1425 (1426)
Q Consensus 1377 -~-----g~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~ 1425 (1426)
. ..+..+++. .++++.++.|.++.++++|.++|++++|+++++....+
T Consensus 558 ~~~~~~~~~~~~~~l~-~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~ 611 (613)
T KOG0061|consen 558 LSGNLCCESTGEDVLK-QLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRK 611 (613)
T ss_pred cCcCCcccccHHHHHH-hcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 1 235566665 58999999999999999999999999999999765443
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=2.3e-94 Score=914.53 Aligned_cols=564 Identities=29% Similarity=0.497 Sum_probs=500.3
Q ss_pred ceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCH
Q 000556 853 KLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYPKKQETFARISGYCEQNDIHSPFVTV 931 (1426)
Q Consensus 853 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv 931 (1426)
++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 467999999999999999999999999999999999987643 3589999999987655677889999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCC
Q 000556 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1010 (1426)
Q Consensus 932 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~-~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsg 1010 (1426)
+|||.|++.++.+.....++++++++++++.+||.+++|+.+|.++ .++||||||||++||+||+++|++|+|||||+|
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsg 196 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSG 196 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcc
Confidence 9999999999988777777788889999999999999999999764 678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcccCCCCC
Q 000556 1011 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVEKIKDGY 1090 (1426)
Q Consensus 1011 LD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~~~~~~~~~yf~~~~~~~~~~~~~ 1090 (1426)
||+.++..+++.|++++++|+|||+++|||+.++++.||++++|++ |+++|.|+. +++.+||++++ .+||++.
T Consensus 197 LD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~-G~~v~~G~~----~~~~~~f~~~g--~~~p~~~ 269 (617)
T TIGR00955 197 LDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAE-GRVAYLGSP----DQAVPFFSDLG--HPCPENY 269 (617)
T ss_pred hhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeC-CeEEEECCH----HHHHHHHHHcC--CCCCCCC
Confidence 9999999999999999988999999999999889999999999984 899999996 67899999985 3699999
Q ss_pred CccceEEEeccccchhh-----cccCHHHHHHhcHHHHHHHHHHHHhcCCCCC---CCCCCCCCccCCCHHHHHHHHHHH
Q 000556 1091 NPATWMLEVTASSQEVA-----LGVDFNDIFRCSELYRRNKALIEELSKPTPG---SKDLYFPTQYSQSAFTQFMACLWK 1162 (1426)
Q Consensus 1091 npa~~~l~v~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Q~~~l~~R 1162 (1426)
|||||++|+++...+.+ ...++.+.|++|+.+++..+.+.....+.++ .......++|..++++|++.|++|
T Consensus 270 n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R 349 (617)
T TIGR00955 270 NPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKR 349 (617)
T ss_pred ChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHH
Confidence 99999999987543221 1134566777777666554443322111111 111112346789999999999999
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHhHhhccCCCCCCChhhHHHHHhHHHHHHHHHHHHhhhhcchhhhhhhhHHHhhh
Q 000556 1163 QHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREK 1242 (1426)
Q Consensus 1163 ~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~v~~~~~~er~v~~rE~ 1242 (1426)
+++++||||.++.+|+++++++|+++|++||+++. ++++++++.|++|++++++++.++..+.+.++.||++|+||+
T Consensus 350 ~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~ 426 (617)
T TIGR00955 350 SWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRET 426 (617)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999975 467899999999999999999888888899999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 000556 1243 AAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIV 1322 (1426)
Q Consensus 1243 ~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~ 1322 (1426)
.+|+|++++|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|+++++++.++++++|+++++++|+..+|..+
T Consensus 427 ~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~ 506 (617)
T TIGR00955 427 RSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALTV 506 (617)
T ss_pred cCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHHhCCccc-ccCCC---C---cHHHHHHhhcCCccCc
Q 000556 1323 STLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVED-QMENG---E---TVKHFLRDYFGFKHDF 1395 (1426)
Q Consensus 1323 ~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~-~~~~g---~---~~~~~~~~~~g~~~~~ 1395 (1426)
+++++.++++|+||+++.++||+||+|++|+||++|++++++.|||++.+. +|.++ . ..++++.+.||++.++
T Consensus 507 ~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~~ 586 (617)
T TIGR00955 507 GPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSGEVILETLSFRNAD 586 (617)
T ss_pred HHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcChHHHHHhcCCCccc
Confidence 999999999999999999999999999999999999999999999998775 55421 1 1146666789999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 000556 1396 LGLVAGVLTCFVALFGFVFALGIKQLNFQRR 1426 (1426)
Q Consensus 1396 ~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1426 (1426)
.|.+++++++|+++|+++++++||+-...+|
T Consensus 587 ~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 587 LYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999998766665
No 6
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=4.6e-94 Score=909.58 Aligned_cols=580 Identities=24% Similarity=0.400 Sum_probs=486.7
Q ss_pred CCceeEEeceeeEEecchhh----------------hhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhc
Q 000556 825 EPHSLTFDEVVYSVDMPQEM----------------KLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLS 888 (1426)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~~----------------~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~ 888 (1426)
.+.++.|.|++|++...... +.....++++.+|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 35789999999998654210 00011234567999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc
Q 000556 889 GRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL 968 (1426)
Q Consensus 889 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~ 968 (1426)
|+..++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+...+.++++++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876544689999999886533 345689999999999999999999999888766555666677789999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhc
Q 000556 969 IQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAF 1048 (1426)
Q Consensus 969 ~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~f 1048 (1426)
.|+.+|....++||||||||++||++|+++|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999987788999999999999999999999999999999999999999999999998889999999999997789999
Q ss_pred ceEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcccCCCCCCccceEEEeccccchhh------c---ccCHHHHHHhc
Q 000556 1049 DELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVEKIKDGYNPATWMLEVTASSQEVA------L---GVDFNDIFRCS 1119 (1426)
Q Consensus 1049 D~v~ll~~gg~~v~~G~~~~~~~~~~~yf~~~~~~~~~~~~~npa~~~l~v~~~~~~~~------~---~~~~~~~~~~s 1119 (1426)
|++++|++ |+++|.|+. +++++||++++ .+||+++|||||++|+++...+.. . .....+.|+++
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~G--~~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESVG--FSPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHCC--CCCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 799999996 68999999995 369999999999999987532100 0 01122344321
Q ss_pred HHHHHHHHHHHH--hcC-CCC-----CCCCCC-CCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhH
Q 000556 1120 ELYRRNKALIEE--LSK-PTP-----GSKDLY-FPTQYSQSAFTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGS 1190 (1426)
Q Consensus 1120 ~~~~~~~~~~~~--~~~-~~~-----~~~~~~-~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~ 1190 (1426)
..++..+.++. ... +.. ..+... ..+.+..+||+|+.+|++|++++ ||++.+..+|+++++++|+++|+
T Consensus 348 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 -LAPKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred -ccHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 11111111111 000 000 001100 11235678999999999999998 99999999999999999999999
Q ss_pred hhccCCCCCCChhhHHHHHhHHHHHHHHHHHHhhhhcchhhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 000556 1191 LFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVV 1270 (1426)
Q Consensus 1191 ~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~v~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~ 1270 (1426)
+||+++ ..+++++.|++|+++++.++.+++.+++.++.||+||+|||++|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999984 467999999999999998888888888999999999999999999999999999999999999999999
Q ss_pred hhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhh
Q 000556 1271 YCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWY 1350 (1426)
Q Consensus 1271 ~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~ 1350 (1426)
|++|+|||+||++++.+||+|+++++++.++++++|+++++++||.++|+.++++++.++++|+||+++ +||+||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999999
Q ss_pred hccCHHHHHHHHHHHHHhCCccc-----ccCC-----CCcHHHHHHhhcCCccCchhhHHHHHHHHHHHHHHHHHHHHHh
Q 000556 1351 YWANPVAWTLYGLIASQFGDVED-----QMEN-----GETVKHFLRDYFGFKHDFLGLVAGVLTCFVALFGFVFALGIKQ 1420 (1426)
Q Consensus 1351 ~~isp~~y~~~~l~~~~~~~~~~-----~~~~-----g~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~ 1420 (1426)
+|+||++|++++++.|||++.+. .|+. +..| .++. ..++++...|.++++|++|+++|++++|++|++
T Consensus 579 ~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c-~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~ 656 (659)
T PLN03211 579 KYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASC-KFVE-EDVAGQISPATSVSVLIFMFVGYRLLAYLALRR 656 (659)
T ss_pred HHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCC-ccch-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999987542 4531 1112 2332 234455678999999999999999999999998
Q ss_pred hcc
Q 000556 1421 LNF 1423 (1426)
Q Consensus 1421 ~~~ 1423 (1426)
+||
T Consensus 657 ~~~ 659 (659)
T PLN03211 657 IKH 659 (659)
T ss_pred ccC
Confidence 876
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.6e-91 Score=946.56 Aligned_cols=588 Identities=23% Similarity=0.381 Sum_probs=508.4
Q ss_pred CCceeEEeceeeEEecchh-------------hh-h-----cccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHh
Q 000556 825 EPHSLTFDEVVYSVDMPQE-------------MK-L-----QGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMD 885 (1426)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~-------------~~-~-----~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~ 885 (1426)
+...+.|+|++........ .. . .+....++.+|+|||+.++|||+++|+||||||||||||
T Consensus 26 ~~~~v~~~~l~v~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk 105 (1394)
T TIGR00956 26 YKLGVAYKNLSAYGVAADSDYQPTFPNALLKILTRGFRKLKKFRDTKTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLK 105 (1394)
T ss_pred CeeeEEEECCEEEEEeccccccCchHHHHHHHHHHHHHHhcccCCCCcceeeeCCEEEEECCEEEEEECCCCCCHHHHHH
Confidence 3567899999876622110 00 0 012234567999999999999999999999999999999
Q ss_pred hhcCCCCC--ceEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC----CCCHHHHHH-HH
Q 000556 886 VLSGRKTG--GYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP----EVDSETRKM-FI 956 (1426)
Q Consensus 886 ~L~g~~~~--~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~----~~~~~~~~~-~v 956 (1426)
+|+|+..+ .+.+|+|.+||.+..+ ..+++.++||+|+|.|+|.+||+|++.|++.++.|. ..+.+++.+ .+
T Consensus 106 ~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 185 (1394)
T TIGR00956 106 TIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLDFAARCKTPQNRPDGVSREEYAKHIA 185 (1394)
T ss_pred HHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHH
Confidence 99998632 2468999999987643 234567999999999999999999999999887653 233444333 35
Q ss_pred HHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEE
Q 000556 957 EEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVC 1035 (1426)
Q Consensus 957 ~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~ 1035 (1426)
+++++.+||.+++|+.+|++.+++|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+
T Consensus 186 ~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii 265 (1394)
T TIGR00956 186 DVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLV 265 (1394)
T ss_pred HHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 7799999999999999999888999999999999999999999999999999999999999999999999875 999999
Q ss_pred EecCCCHHHHhhcceEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcccCCCCCCccceEEEeccccch-------h--
Q 000556 1036 TIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVEKIKDGYNPATWMLEVTASSQE-------V-- 1106 (1426)
Q Consensus 1036 ~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~~~~~~~~~yf~~~~~~~~~~~~~npa~~~l~v~~~~~~-------~-- 1106 (1426)
++|||+.++++.||++++|++ |+++|+|+. +++++||++++ . +||+++|||||++|+++++.+ .
T Consensus 266 ~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~lG-~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~ 338 (1394)
T TIGR00956 266 AIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKMG-F-KCPDRQTTADFLTSLTSPAERQIKPGYEKKV 338 (1394)
T ss_pred EecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHcC-C-CCCCCCChHHHHHhccChhhhhccccccccC
Confidence 999998889999999999986 799999986 68999999995 3 699999999999999875421 1
Q ss_pred -hcccCHHHHHHhcHHHHHHHHHHHHhcCCC---------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHhcC
Q 000556 1107 -ALGVDFNDIFRCSELYRRNKALIEELSKPT---------------PGSKDLYFPTQYSQSAFTQFMACLWKQHWSYWRN 1170 (1426)
Q Consensus 1107 -~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~ 1170 (1426)
....+|++.|++|+.+++..+.++...... ..++.....+.|..|+|+|+++|++|+++.+|||
T Consensus 339 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd 418 (1394)
T TIGR00956 339 PRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGN 418 (1394)
T ss_pred CCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 123579999999998887766554321110 0011122334688999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhHhhccCCCCCCChhhHHHHHhHHHHHHHHHHHHhhhhcchhhhhhhhHHHhhhcCCCCChH
Q 000556 1171 PQYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGL 1250 (1426)
Q Consensus 1171 ~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~v~~~~~~er~v~~rE~~~~~Y~~~ 1250 (1426)
|.++.+|+++++++|+++|++||++++ ++++++++.|++|+++++.++.++..+ +.+..||+||+|||.+++|+++
T Consensus 419 ~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ 494 (1394)
T TIGR00956 419 PSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAILFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPS 494 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCcceeeeccccccCHH
Confidence 999999999999999999999999986 467899999999999999999887665 4456799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 000556 1251 PWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIW 1330 (1426)
Q Consensus 1251 ~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~ 1330 (1426)
+|++|++++|+|+.++.+++|++|+|||+||++++.+||+|+++++++.++++++|+++++++||..+|+.++++++.++
T Consensus 495 ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~ 574 (1394)
T TIGR00956 495 ADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLAL 574 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHHhCCcccccC-------------------------CC---CcHH
Q 000556 1331 YLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQME-------------------------NG---ETVK 1382 (1426)
Q Consensus 1331 ~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~-------------------------~g---~~~~ 1382 (1426)
++|+||++|+++||+||+|++|+||++|++++++.|||++.+.+|. +| .++.
T Consensus 575 ~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~ 654 (1394)
T TIGR00956 575 SIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGD 654 (1394)
T ss_pred HHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHH
Confidence 9999999999999999999999999999999999999998777662 01 1567
Q ss_pred HHHHhhcCCccCchhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000556 1383 HFLRDYFGFKHDFLGLVAGVLTCFVALFGFVFALGIKQLNF 1423 (1426)
Q Consensus 1383 ~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1423 (1426)
+|+...||++++++|+|++|+++|+++|++++++++++++.
T Consensus 655 ~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 655 DYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred HHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99988899999999999999999999999999999999873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=5.4e-90 Score=928.23 Aligned_cols=590 Identities=23% Similarity=0.389 Sum_probs=499.8
Q ss_pred CCceeEEeceeeEEecchh-------h----------h-hcc---cccCceEEeeeeEEEEeCCcEEEEeccCCCchhHH
Q 000556 825 EPHSLTFDEVVYSVDMPQE-------M----------K-LQG---VLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTL 883 (1426)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~-------~----------~-~~~---~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTL 883 (1426)
+...+.|+|+++..+.... . . ..+ .+..++.+|+||||.++|||+++|+||||||||||
T Consensus 128 ~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTL 207 (1470)
T PLN03140 128 PTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTL 207 (1470)
T ss_pred CCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHHH
Confidence 3457899999887662111 0 0 001 12235679999999999999999999999999999
Q ss_pred HhhhcCCCCCc-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCC-------CCHHHH---
Q 000556 884 MDVLSGRKTGG-YITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPE-------VDSETR--- 952 (1426)
Q Consensus 884 l~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~-------~~~~~~--- 952 (1426)
|++|+|+.++. ..+|+|.+||.+..+...++.++||+|+|.|++.+||+|+|.|++.++.+.. ...+++
T Consensus 208 Lk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~ 287 (1470)
T PLN03140 208 LLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAG 287 (1470)
T ss_pred HHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhcc
Confidence 99999986542 4589999999987554446789999999999999999999999988764321 111111
Q ss_pred ---------------------HHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000556 953 ---------------------KMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1011 (1426)
Q Consensus 953 ---------------------~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgL 1011 (1426)
+..++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|++|||||||+||
T Consensus 288 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGL 367 (1470)
T PLN03140 288 IFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGL 367 (1470)
T ss_pred CCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCc
Confidence 12367899999999999999999888999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcccCCCCC
Q 000556 1012 DARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVEKIKDGY 1090 (1426)
Q Consensus 1012 D~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~~~~~~~~~yf~~~~~~~~~~~~~ 1090 (1426)
|+.++..+++.|+++++ .|+|||+++|||+.+++++||+|++|++ |+++|+||. +++++||++++ . +||+++
T Consensus 368 Ds~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G~ivy~G~~----~~~~~yF~~lG-f-~cP~~~ 440 (1470)
T PLN03140 368 DSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-GQIVYQGPR----DHILEFFESCG-F-KCPERK 440 (1470)
T ss_pred cHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-ceEEEeCCH----HHHHHHHHHcC-C-CCCCCC
Confidence 99999999999999987 4899999999998899999999999985 899999996 68899999995 3 699999
Q ss_pred CccceEEEeccccch-h-----------hcccCHHHHHHhcHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCHHHHHHH
Q 000556 1091 NPATWMLEVTASSQE-V-----------ALGVDFNDIFRCSELYRRNKALIEELSKPTPGSKDLYFPTQYSQSAFTQFMA 1158 (1426)
Q Consensus 1091 npa~~~l~v~~~~~~-~-----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~ 1158 (1426)
|||||++|+++.... . ....+|++.|++|+.+++..+.++.........+.....++|..|++.|++.
T Consensus 441 n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~ 520 (1470)
T PLN03140 441 GTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKA 520 (1470)
T ss_pred ChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHH
Confidence 999999999886432 1 1124689999999888776654432111111111111234689999999999
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhccCCCCCCChhhHHHHHhHHHHHHHHHHHHhhhhcchhhhhhhhHH
Q 000556 1159 CLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVF 1238 (1426)
Q Consensus 1159 l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~v~~~~~~er~v~ 1238 (1426)
|++|+++.+||||.++..|+++.+++|+++|++||+++.+..+..+.+...|++|++++++++.++.. ++.+..||+||
T Consensus 521 ~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~-l~~~~~~r~vf 599 (1470)
T PLN03140 521 CWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAE-LALMIQRLPVF 599 (1470)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccchh
Confidence 99999999999999999999999999999999999998654444566778999999999888877655 47778899999
Q ss_pred HhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Q 000556 1239 YREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHI 1318 (1426)
Q Consensus 1239 ~rE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~ 1318 (1426)
+|||.+++|++++|++|++++|+|+.++.+++|++|+|||+||++++++||.|+++++++.++++++++++++++|+..+
T Consensus 600 ~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~ 679 (1470)
T PLN03140 600 YKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMII 679 (1470)
T ss_pred HHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHHhCCcccc---cC-CC-CcHHHHHHhhcCCcc
Q 000556 1319 AAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQ---ME-NG-ETVKHFLRDYFGFKH 1393 (1426)
Q Consensus 1319 A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~---~~-~g-~~~~~~~~~~~g~~~ 1393 (1426)
|+.++++++.++++|+||+||+++||+||+|++|+||++|+++|++.|||.+.... |. .. .++.+|+ +.+|+..
T Consensus 680 A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L-~~~g~~~ 758 (1470)
T PLN03140 680 ANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVL-NIFDVFT 758 (1470)
T ss_pred HHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHH-HhcCcCc
Confidence 99999999999999999999999999999999999999999999999999765432 21 12 2445555 7789975
Q ss_pred C--chhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000556 1394 D--FLGLVAGVLTCFVALFGFVFALGIKQLNF 1423 (1426)
Q Consensus 1394 ~--~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1423 (1426)
+ +.|+++++|++|+++|++++++++++++.
T Consensus 759 ~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~ 790 (1470)
T PLN03140 759 DKNWYWIGVGALLGFTILFNVLFTLALTYLNP 790 (1470)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 5 56999999999999999999999999873
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-84 Score=813.34 Aligned_cols=563 Identities=26% Similarity=0.475 Sum_probs=502.6
Q ss_pred CceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCCC
Q 000556 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYPKKQETFARISGYCEQNDIHSPFVT 930 (1426)
Q Consensus 852 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lT 930 (1426)
.+..+|+|+||.++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.+....++.++|+.|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3457999999999999999999999999999999999975432 235799999998776545788999999999999999
Q ss_pred HHHHHHHHHHhcCCCC----CCHHHHH-HHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEe
Q 000556 931 VYESLLYSAWLRLPPE----VDSETRK-MFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1005 (1426)
Q Consensus 931 v~e~l~f~a~lr~~~~----~~~~~~~-~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLD 1005 (1426)
|+|+|.|+++++.+.. .++.++. +..+.+++.+||++++|++||+...+|+||||||||+||.+++.+|+++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999998732 2222222 2577999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcc
Q 000556 1006 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVE 1084 (1426)
Q Consensus 1006 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~~~~~~~~~yf~~~~~~~ 1084 (1426)
|+|+|||+.++.++.+.||++++. +.|+++++|||+.+++++||+|++|.+ |++||+||. .++++||++++ -
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~G--f 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDMG--F 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhcC--c
Confidence 999999999999999999999875 899999999999999999999999996 799999998 58899999986 3
Q ss_pred cCCCCCCccceEEEeccccchh-----------hcc-cCHHHHHHhcHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCH
Q 000556 1085 KIKDGYNPATWMLEVTASSQEV-----------ALG-VDFNDIFRCSELYRRNKALIEELSKPTPGSKDLYFPTQYSQSA 1152 (1426)
Q Consensus 1085 ~~~~~~npa~~~l~v~~~~~~~-----------~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1152 (1426)
.||+..++|||+.++++...+. ... .+|++.|.+|+.+++.+..++........++.....++|..|+
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 6999999999999999832211 112 5799999999999887755433221122233333456899999
Q ss_pred HHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhccCCCCCCChhhHHHHHhHHHHHHHHHHHHhhhhcchhhh
Q 000556 1153 FTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVS 1232 (1426)
Q Consensus 1153 ~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~v~~~~~ 1232 (1426)
|.|++.|+.|.++.+.||..|...++++.+++|+++|++|++... .+..+.+.+.|++||++++..+++++++ +...
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHH
Confidence 999999999999999999999999999999999999999999972 5677899999999999999999888776 5566
Q ss_pred hhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000556 1233 VERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAI 1312 (1426)
Q Consensus 1233 ~er~v~~rE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1312 (1426)
+.|+||+|||...+|++++|.++..+.++|+.++.+++|.+|+||++||.+++++||.|+++++++..++.+++++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHHhCCcccccC-C--------------
Q 000556 1313 TPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQME-N-------------- 1377 (1426)
Q Consensus 1313 ~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~-~-------------- 1377 (1426)
+++..+|+.++++.+....+++||+||.++||+||+|++|+||+.|++++++.|||++.+.+|+ .
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c 675 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVC 675 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999888774 1
Q ss_pred -------CC---cHHHHHHhhcCCccCchhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 000556 1378 -------GE---TVKHFLRDYFGFKHDFLGLVAGVLTCFVALFGFVFALGIKQLNFQ 1424 (1426)
Q Consensus 1378 -------g~---~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~ 1424 (1426)
|. .+.+|++..|+|++.|.|++++|++||.++|.+++.+++.|+|.-
T Consensus 676 ~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 676 AATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred hhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 11 357888888999999999999999999999999999999999863
No 10
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4e-77 Score=747.24 Aligned_cols=567 Identities=30% Similarity=0.498 Sum_probs=472.7
Q ss_pred CCccEEEEeceEEEEEEecCCCCCCChhHHHHHHHHHHHhhhccCCCCcccceEeecceEEEeCCeEEEEEcCCCCcHHH
Q 000556 114 LPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTT 193 (1426)
Q Consensus 114 ~p~v~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKST 193 (1426)
...++++|+|+++++... .+ ..+++|+||||+++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~----------------------------~~-~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK----------------------------SK-KTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC----------------------------CC-ccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 457889999999998642 11 4578999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhc
Q 000556 194 LLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEA 273 (1426)
Q Consensus 194 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 273 (1426)
||++|+|+.+...+++|+|++||++.+....++.+|||.|+|.++|++||+|||.|+++++.+.+ +
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~------- 137 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------L------- 137 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------C-------
Confidence 99999999987667899999999887776678899999999999999999999999999875432 1
Q ss_pred CCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCC
Q 000556 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTG 353 (1426)
Q Consensus 274 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsg 353 (1426)
..++.+.+++++++.|||.+|+||+||+...||+||||||||+||..|+.+|+|||+||||||
T Consensus 138 -----------------~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 138 -----------------SKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred -----------------CHHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 112345679999999999999999999988899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHH
Q 000556 354 LDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1426)
Q Consensus 354 LDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl 433 (1426)
||+.++.++++.|+++|+. ++|+|+++|||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999986 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHhhcCCccccccccccccCccccCcHHHHHHHHHHHHH
Q 000556 434 QEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISREL 513 (1426)
Q Consensus 434 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~ 513 (1426)
.++.+..++.+.... ........+.++......+.......... + ..........++|.|+..+.+|.+
T Consensus 280 l~l~s~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~s~~~q~~~L~~R~~ 348 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEE------AVRIAKLINKFSQTDNLKKTLEALEKSLS----T-SKKVEIGTSPSWWTQFKILLKRSL 348 (613)
T ss_pred HHHHccCCCchhHHh------HHHHHHHhhhccccchhhhhHHHHhhhcc----c-ccccccccCCcHHHHHHHHHHHHh
Confidence 998874311000000 00000011111100000000000000000 0 000011116789999999999999
Q ss_pred HHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccchhHHHHHHHHHHHHHHHHH-HHHHHhccchhhhhhccC
Q 000556 514 LLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGALFFATAMVMFNGLA-EISMTIAKLPVFYKQRDF 592 (1426)
Q Consensus 514 l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~-~~~~~~~~~~vf~k~r~~ 592 (1426)
..+.|++.+...|+.+.+.+++++|++|++.+.... ......|++|+.+.+..+..+. .++.+..++++|.||+..
T Consensus 349 ~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~---~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~~ 425 (613)
T KOG0061|consen 349 KNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAK---GIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRETSS 425 (613)
T ss_pred HHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchH---HHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHhc
Confidence 999999999999999999999999999998754433 2236678889988888776666 588999999999999999
Q ss_pred CCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhccc--
Q 000556 593 RFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTF-- 670 (1426)
Q Consensus 593 ~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~-- 670 (1426)
+.|+.++|++++.+.++|+.++.+++|.+++|||+|+.++..+|+.+.++.++..+++.++..+++++.++...|.++
T Consensus 426 ~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~~ 505 (613)
T KOG0061|consen 426 GLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSLGP 505 (613)
T ss_pred CchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeehHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987766554
Q ss_pred ----------------ccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCC--CCccchhHHHhhccCccccchHHH
Q 000556 671 ----------------EDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTP--NSYESIGVQVLKSRGFFAHAYWYW 732 (1426)
Q Consensus 671 ----------------~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~--~~~~~~g~~~L~~~~~~~~~~~~w 732 (1426)
++||.||+|+.|+|+.+|+++++++|||.+....|... ..+...+.++++..++...+ .|
T Consensus 506 ~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~ 583 (613)
T KOG0061|consen 506 VLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDSS--FW 583 (613)
T ss_pred HHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCcccc--cc
Confidence 68999999999999999999999999999744444332 34567889999988886544 56
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Q 000556 733 LGLGALFGFILLFNLGFTMAITFLN 757 (1426)
Q Consensus 733 ~~~g~l~~~~v~f~~~~~~al~~~~ 757 (1426)
.++.++++++++|.++.++++++..
T Consensus 584 ~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 584 LDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8899999999999999999998763
No 11
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=9.4e-76 Score=742.68 Aligned_cols=593 Identities=21% Similarity=0.328 Sum_probs=454.1
Q ss_pred CCccEEEEeceEEEEEEecCCCCCCChhHHHHHHHHHHHhhhccCCCCcccceEeecceEEEeCCeEEEEEcCCCCcHHH
Q 000556 114 LPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTT 193 (1426)
Q Consensus 114 ~p~v~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKST 193 (1426)
.+.++++|+|+++.+.......+... +...+..--. .....++..++++|+|+|++++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~~-~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKPK-ISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----cccccccccc-cccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 45899999999999764310111110 0111000000 000111223567999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhc
Q 000556 194 LLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEA 273 (1426)
Q Consensus 194 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 273 (1426)
||++|+|+++++ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++..... .
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~-------~------ 174 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSL-------T------ 174 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCC-------C------
Confidence 999999998764 3589999999987532 235689999999999999999999998765421100 0
Q ss_pred CCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCC
Q 000556 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTG 353 (1426)
Q Consensus 274 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsg 353 (1426)
..+.+.+++++++.+||++++||.||++..++|||||||||+||++|+.+|++++|||||+|
T Consensus 175 ------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 175 ------------------KQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred ------------------HHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 01122456889999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHH
Q 000556 354 LDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1426)
Q Consensus 354 LDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl 433 (1426)
||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+.+++.+||+++||+||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999876 5789999888888889999999999999999999999999999999999999999999999
Q ss_pred HhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHhhcC---Cccccc-----ccc-ccccCccccCcHHHH
Q 000556 434 QEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT---PFDKSK-----SHR-AALTTEVYGAGKREL 504 (1426)
Q Consensus 434 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~-----~~~-~~~~~~~~~~~~~~~ 504 (1426)
.++++...+.......+.+ ...+.+.+.|++.. ..+..+.... +....+ ..+ .......+..++|.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998764321100000111 11233334443211 1111111100 000000 000 000112355789999
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccchhHHHHHHHHHHHHH-HHHHHHHHHhccc
Q 000556 505 LKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGALFFATAMVMF-NGLAEISMTIAKL 583 (1426)
Q Consensus 505 ~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~lf~~l~~~~~-~~~~~~~~~~~~~ 583 (1426)
+..+++|.++. +|+..+...|+++.+++|+++|++|++.+ ..+.+...|++||++++.++ ..+..++.+..+|
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888 78887778999999999999999999753 23456778999999877555 5567888888999
Q ss_pred hhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000556 584 PVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRS 663 (1426)
Q Consensus 584 ~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~s 663 (1426)
++|+|||..++|++++|++++++.++|+.++.+++|.+++|||+|+.+++++||.|+++++++.+++.+++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhccc----------------ccccccchhhhhhcHHHHHHHHHHHHHhcCCc-----ccccCCCCccchhHHHhhcc
Q 000556 664 MVVANTF----------------EDIKKWWKWAYWCSPMSYAQNAIVANEFLGYS-----WKKFTPNSYESIGVQVLKSR 722 (1426)
Q Consensus 664 ~~~a~~~----------------~~ip~~~~W~~~isp~~y~~~al~~nef~~~~-----~~~~~~~~~~~~g~~~L~~~ 722 (1426)
+.+|+.+ .+||+||+|++|+||++|+++++++|||.+.+ ..|..+......+..++...
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~~~ 625 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVHKLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVEED 625 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHhhchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccchhh
Confidence 8887654 68999999999999999999999999997644 23422211111111222222
Q ss_pred CccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000556 723 GFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLN 757 (1426)
Q Consensus 723 ~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~ 757 (1426)
.+. ....|.++++|++++++|.++.+++|++.+
T Consensus 626 ~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 626 VAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 222 234678899999999999999999997653
No 12
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=3.6e-76 Score=748.28 Aligned_cols=551 Identities=27% Similarity=0.411 Sum_probs=461.4
Q ss_pred cccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCC
Q 000556 162 KKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1426)
+.++++|+|+|+.++|||+++|+|||||||||||++|+|+.++....+|+|.+||.+++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 44678999999999999999999999999999999999998875456899999999876544567899999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc-
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM- 320 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~- 320 (1426)
||+|||.|+++++.+.... .++...+++.+++.+||++++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~~~-------------------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRVT-------------------------------KKEKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCCC-------------------------------HHHHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 9999999998776422100 01123457889999999999999999864
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
.++|||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++ .++|+|+++|||+.+++++||+|++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 789999999999999999999999999999999999999999999999876 4789999999999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHhhcC
Q 000556 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1426)
Q Consensus 401 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (1426)
|+++|+|+++++.+||+++|++||++.|++||+.++++....... . .....+++.+.|+.+...++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998875432110 0 112234566666665554444333221
Q ss_pred Ccccc---ccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccchh
Q 000556 481 PFDKS---KSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIY 557 (1426)
Q Consensus 481 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~ 557 (1426)
..... ...........|..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+. .+....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 11100 000011123457788999999999999999999999999999999999999999999765432 334556
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHHHH
Q 000556 558 AGALFFATAMVMFNGL-AEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRF 636 (1426)
Q Consensus 558 ~g~lf~~l~~~~~~~~-~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f 636 (1426)
.|++|+.++...|.++ ..++.+..++++|+||+..++|++++|++++.+.++|+.++.+++|.+++|||+|+.+++.+|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 7899999888888765 456677789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhccc------------------ccccccchhhhhhcHHHHHHHHHHHHHh
Q 000556 637 FKQYLLFLAVNQMASALFRLIAATGRSMVVANTF------------------EDIKKWWKWAYWCSPMSYAQNAIVANEF 698 (1426)
Q Consensus 637 f~~~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~------------------~~ip~~~~W~~~isp~~y~~~al~~nef 698 (1426)
|.++++++++..++.+++++++++++++.+|..+ ++||+||+|++|+||++|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998877554 7899999999999999999999999999
Q ss_pred cCCcc-cccCCC---CccchhHHHhhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000556 699 LGYSW-KKFTPN---SYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFL 756 (1426)
Q Consensus 699 ~~~~~-~~~~~~---~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~ 756 (1426)
.+..+ .|...+ .+...|.++|+.+|+... +.|.++++++++.++|.++++++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98776 443211 133468999999988654 458899999999999999999999874
No 13
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.6e-74 Score=721.38 Aligned_cols=777 Identities=20% Similarity=0.248 Sum_probs=420.4
Q ss_pred CCCcccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCC
Q 000556 159 PSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHD 235 (1426)
Q Consensus 159 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d 235 (1426)
|+|+ +..||+|+|+.|++|+.++|+|||||||||++++|.+.++|+ +|+|.++|.++.++.. +.++|.|+|+|
T Consensus 361 PsRp-dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QeP 436 (1228)
T KOG0055|consen 361 PSRP-DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEP 436 (1228)
T ss_pred CCCC-cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeech
Confidence 5554 578999999999999999999999999999999999999998 9999999999987765 46899999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 000556 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTM 315 (1426)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1426)
.+|. .||+|||.|+..- ...++..+++. .++..--+..|++..||.
T Consensus 437 vlF~-~tI~eNI~~G~~d-------------------------at~~~i~~a~k--------~ana~~fi~~lp~g~~T~ 482 (1228)
T KOG0055|consen 437 VLFA-TTIRENIRYGKPD-------------------------ATREEIEEAAK--------AANAHDFILKLPDGYDTL 482 (1228)
T ss_pred hhhc-ccHHHHHhcCCCc-------------------------ccHHHHHHHHH--------HccHHHHHHhhHHhhccc
Confidence 6664 6999999997421 11111111111 111112244578889999
Q ss_pred ccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 316 vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
||++++ +|||||||||+|||||+.+|+||+||||||+||+.+...+.+.|++.. .++|+|+ +.|..+.+-+ +|+|
T Consensus 483 vge~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTiv-VaHRLStIrn-aD~I 557 (1228)
T KOG0055|consen 483 VGERGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIV-VAHRLSTIRN-ADKI 557 (1228)
T ss_pred ccCCCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEE-Eeeehhhhhc-cCEE
Confidence 999887 499999999999999999999999999999999999999999998864 4677777 4555555555 9999
Q ss_pred EEecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHH--HhhcCccchhhhhcccCCCCccCCHHHHHHHHHhccc---
Q 000556 396 ILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL--QEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHV--- 470 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl--~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 470 (1426)
++|++|+|++.|+++|++.. .--.++.+ |+....++. ..+.... .++.....+.+..
T Consensus 558 ~v~~~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~-~~~~~~~-------~~~~~~s~~~s~~~~~ 619 (1228)
T KOG0055|consen 558 AVMEEGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAED-EEEEESL-------KEERSRSLKSSSSSPS 619 (1228)
T ss_pred EEEECCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhc-cccccch-------hhhhhhcccccccccc
Confidence 99999999999999999862 00111221 222221110 0000000 0000000000000
Q ss_pred -chh-hHHhh--cCCccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHH-------HHHHHHHHHH
Q 000556 471 -GQK-ISDEL--RTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQ-------ISSVALAFMT 539 (1426)
Q Consensus 471 -~~~-~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~-------~~~~ali~gt 539 (1426)
... ..... ..+.+.....+ ........+++ |-+...+.++.+.+..++. ..+.+++++.
T Consensus 620 ~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~~~s~~--------~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~ 689 (1228)
T KOG0055|consen 620 LSRGSNRSNLLSVKPEGEDPEEP--VSEEDEKVSFW--------RIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQ 689 (1228)
T ss_pred ccCCccccccccccccccccccc--cccccccccHH--------HHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 000 00000 00000000000 00011222333 3344444444444433332 2334444444
Q ss_pred hhhcccCCC-CcccccchhHHHHHHHHHHH----------HHHHHHHHHHHhccchhhhh--hccCCCCChhhH--HHHH
Q 000556 540 LFLRTKMHK-HSLTDGGIYAGALFFATAMV----------MFNGLAEISMTIAKLPVFYK--QRDFRFFPPWAY--AIPS 604 (1426)
Q Consensus 540 ~f~~~~~~~-~~~~~~~~~~g~lf~~l~~~----------~~~~~~~~~~~~~~~~vf~k--~r~~~~y~~~ay--~la~ 604 (1426)
++-...... +........+..+|.++... +|.-..+....-.|...|.+ ..+..||.--.. .+.+
T Consensus 690 ~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~ 769 (1228)
T KOG0055|consen 690 VLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSS 769 (1228)
T ss_pred HHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHH
Confidence 432211111 11111122244444433322 12222232222223333322 122333322111 1111
Q ss_pred H-HHHhh---------HHHHHHHHHhhhheeccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhh-------
Q 000556 605 W-ILKIP---------ISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVA------- 667 (1426)
Q Consensus 605 ~-l~~iP---------~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~s~~~a------- 667 (1426)
- ..+.| ++.+.-.+..+++-..++|..++.--+......-++........+++.........+
T Consensus 770 RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~i 849 (1228)
T KOG0055|consen 770 RLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKI 849 (1228)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 1 11111 111110011111101111110000000000011111111111122222211111100
Q ss_pred --cccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHhhccCccccchHHHHHHHHHHHHH---
Q 000556 668 --NTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFI--- 742 (1426)
Q Consensus 668 --~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~--- 742 (1426)
..+.+|. .--.++.+.-+.+.|.. .++...-.......|.+++.-+...
T Consensus 850 A~eai~NIr---------TV~al~~e~~~~~~y~~-----------------~l~~p~~~~~~~~~i~gl~f~~sqs~~~ 903 (1228)
T KOG0055|consen 850 AIEAVSNIR---------TVAALCAEEKFMELYKE-----------------ELEKPRKSSFKRGLISGLGFGFSQSLLF 903 (1228)
T ss_pred HHHHHHhHH---------HHHHHhhHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001100 00111122222222211 0000000000001122222111111
Q ss_pred HHHHHHHHHHHHhccccCCCcceeecccccc----cc-ccccccccccccCCCCCCcccCCCCCcchhhhhcccCCCCCC
Q 000556 743 LLFNLGFTMAITFLNQLEKPRAVITEESESN----KQ-DNRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKK 817 (1426)
Q Consensus 743 v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (1426)
..+.+.++.+......- ....+..... .. ...........++...+...... .-..+++....+....
T Consensus 904 ~~~A~~f~~G~~Li~~g----~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~---iF~i~dr~~~i~~~~~ 976 (1228)
T KOG0055|consen 904 FVYALSFWYGARLISNG----EMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGS---IFEILDRKPTIDPDST 976 (1228)
T ss_pred HHHHHHHHHhHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHH---HHHHhcCCCCCCCCCC
Confidence 11122222222221110 0000000000 00 00000000000000000000000 0000000000011111
Q ss_pred CCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEE
Q 000556 818 RGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYIT 897 (1426)
Q Consensus 818 ~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~ 897 (1426)
.+...|.....++|+||+++|+..+ ..++|+|+|+++++|+.+||+|||||||||++.+|-+..+ +..
T Consensus 977 ~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p~~ 1044 (1228)
T KOG0055|consen 977 SGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--PDA 1044 (1228)
T ss_pred CCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--CCC
Confidence 2223344456899999999998654 4579999999999999999999999999999999987655 568
Q ss_pred EEEEEcCccCCcc---cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-------CCcc
Q 000556 898 GNITISGYPKKQE---TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELV-------ELKP 967 (1426)
Q Consensus 898 G~i~i~g~~~~~~---~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-------~L~~ 967 (1426)
|.|.|||.++++. ..|+.+|.|.|+|.++. -|++||+.|+. . +++.++ +.++++.. +|.+
T Consensus 1045 G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~----~-~vs~~e----Ii~Aak~ANaH~FI~sLP~ 1114 (1228)
T KOG0055|consen 1045 GKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS----E-EVSEEE----IIEAAKLANAHNFISSLPQ 1114 (1228)
T ss_pred CeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC----C-CCCHHH----HHHHHHHhhhHHHHhcCcC
Confidence 9999999998763 46788999999999985 69999999971 1 133332 45555543 5667
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhh
Q 000556 968 LIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDA 1047 (1426)
Q Consensus 968 ~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~ 1047 (1426)
-.||.||..|. +||||||||++||||+++||+||+|||+||.||+++.+.|+++|++.. .|||.|+++|++| ..+.
T Consensus 1115 GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAHRLS--TIqn 1190 (1228)
T KOG0055|consen 1115 GYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAHRLS--TIQN 1190 (1228)
T ss_pred cccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEecchh--hhhc
Confidence 78999998764 799999999999999999999999999999999999999999999874 5899999999987 5788
Q ss_pred cceEEEEecCcEEEEEcCC
Q 000556 1048 FDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1048 fD~v~ll~~gg~~v~~G~~ 1066 (1426)
+|.|.|+++ |+++..|.-
T Consensus 1191 aD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1191 ADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred CCEEEEEEC-CEEEecccH
Confidence 999999985 899999974
No 14
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.4e-73 Score=730.68 Aligned_cols=769 Identities=20% Similarity=0.247 Sum_probs=457.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1426)
.+.|+|||+.|++|+++||+||.||||||||.+|.|+++.. +|+|.++| .++||+|+++ +.+.|||
T Consensus 534 ~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pW-I~ngTvr 599 (1381)
T KOG0054|consen 534 EPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPW-IQNGTVR 599 (1381)
T ss_pred cccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccH-hhCCcHH
Confidence 34899999999999999999999999999999999999875 99999999 4899999984 5567999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 000556 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1426)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1426)
|||.|+..+. ..||+.+.+.|.+++|..++|++| .|.||++++ +|
T Consensus 600 eNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIGErGi-nL 644 (1381)
T KOG0054|consen 600 ENILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIGERGI-NL 644 (1381)
T ss_pred HhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceecCCcc-CC
Confidence 9999998875 379999999999999999999998 499999988 69
Q ss_pred ChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHH-HHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVN-CLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~-~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
||||||||++|||++++++|++||+|.|++|+++..+|++ +++.+. .++|+|+ ++| .-+..+.+|.|++|++|+|
T Consensus 645 SGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~IL-VTH-ql~~L~~ad~Iivl~~G~I 720 (1381)
T KOG0054|consen 645 SGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVIL-VTH-QLQFLPHADQIIVLKDGKI 720 (1381)
T ss_pred cHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEE-EeC-chhhhhhCCEEEEecCCeE
Confidence 9999999999999999999999999999999999999996 786653 3456665 444 4577888999999999999
Q ss_pred EEecChhhHHH---HHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHhhcC
Q 000556 404 VYQGPRELVLE---FFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1426)
Q Consensus 404 v~~G~~~~~~~---~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (1426)
+..|+++|+.+ +|+.+ .. +....++.. .....+.......+. +. +.........+. .
T Consensus 721 ~~~Gty~el~~~~~~~~~l-~~------------~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~--~ 780 (1381)
T KOG0054|consen 721 VESGTYEELLKSGGDFAEL-AH------------EEESEQEEE---ASEKDLESGESSRES-ES-RSLESLSSEEEK--S 780 (1381)
T ss_pred ecccCHHHHHhcchhHHHH-hh------------ccchhhccc---cccccccccccccch-hh-hhhhhhcccccc--c
Confidence 99999999983 33332 00 000000000 000000000000000 00 000000000000 0
Q ss_pred Cccccc-cccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH-HHHHHhhhcccCCCC---cc--cc
Q 000556 481 PFDKSK-SHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVA-LAFMTLFLRTKMHKH---SL--TD 553 (1426)
Q Consensus 481 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~a-li~gt~f~~~~~~~~---~~--~~ 553 (1426)
...+.. ...........+.-.|...+.. +.....-.....+-+.+..... .+.+..|+..+.+.. .. .+
T Consensus 781 ~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y----~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~ 856 (1381)
T KOG0054|consen 781 KDEKEEEDKLVQEEERETGKVSWSVYKKY----IKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVS 856 (1381)
T ss_pred ccccchhhHHHHHHHHhcCEeeHHHHHHH----HHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCC
Confidence 000000 0000000001111111111111 1110110111111111222222 222333333332221 11 12
Q ss_pred cchhHH----HHHHHHHHHHHHHHHHHH--------------HHh--ccchhhhhhccCCCCChhhHHHHHHHHHhhHHH
Q 000556 554 GGIYAG----ALFFATAMVMFNGLAEIS--------------MTI--AKLPVFYKQRDFRFFPPWAYAIPSWILKIPISF 613 (1426)
Q Consensus 554 ~~~~~g----~lf~~l~~~~~~~~~~~~--------------~~~--~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~ 613 (1426)
...|.+ ..+...+..++.++.... -.+ +....|......+..+.++..+......+|..+
T Consensus 857 ~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~ 936 (1381)
T KOG0054|consen 857 TSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTL 936 (1381)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHH
Confidence 222222 111111111111111110 011 122345666777888889999999999999877
Q ss_pred HHHHHHhhhheeccccCCCHHHHHHHHHHHH--------HHHHHHHHHHHHHHHhhccchhhcccccccccchh-hhhhc
Q 000556 614 LEVAVWVFLTYYVIGCDPNAGRFFKQYLLFL--------AVNQMASALFRLIAATGRSMVVANTFEDIKKWWKW-AYWCS 684 (1426)
Q Consensus 614 ~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~--------l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W-~~~is 684 (1426)
...+...+.+-..++....+...|....+.+ .....++.-.+.+.+++++++.++..+++.+-... +|--.
T Consensus 937 ~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~ 1016 (1381)
T KOG0054|consen 937 EFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKE 1016 (1381)
T ss_pred HHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeecccc
Confidence 6655443333333222222222222222111 12233455567788999999999877665544322 11111
Q ss_pred HHHHHHHHHHHHHhcCCcccccCCCCccchhHHHhhccCccccchHHHH-----HHHHHHHHHHHHHHHHHHHHHhcccc
Q 000556 685 PMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLKSRGFFAHAYWYWL-----GLGALFGFILLFNLGFTMAITFLNQL 759 (1426)
Q Consensus 685 p~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~-----~~g~l~~~~v~f~~~~~~al~~~~~~ 759 (1426)
+..-......++......+.....+.|.....+.+...-+........+ .-..++|+.+.|.+..+-.+.+.-.
T Consensus 1017 ~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR- 1095 (1381)
T KOG0054|consen 1017 ERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVR- 1095 (1381)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHH-
Confidence 1111111111111111100000011111111111111000000000000 0012344444444443333333210
Q ss_pred CCCcceeeccccccccccccccccccccCCCCCCcccCCCCCcchhhhhcccCCCCCC-CCccccCCCceeEEeceeeEE
Q 000556 760 EKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKK-RGMILPFEPHSLTFDEVVYSV 838 (1426)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~v~~~~ 838 (1426)
...+.++...+.++...+... ..+.+...+.. ....+| ..+.++|+|++..|
T Consensus 1096 ---------------------~~~elEn~m~SVERv~eY~~~-----~~E~p~~~~~~~pp~~WP-~~G~I~f~~~~~RY 1148 (1381)
T KOG0054|consen 1096 ---------------------QSSELENNMVSVERVLEYTDI-----PSEAPLEIEESRPPPSWP-SKGEIEFEDLSLRY 1148 (1381)
T ss_pred ---------------------HHHHHHhcchhhhHHHHHhcC-----CCCCCCCCcCCCCCCCCC-CCCeEEEEEeEEEe
Confidence 000011111111111000000 00000000000 111222 23479999998777
Q ss_pred ecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc---ccccce
Q 000556 839 DMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ---ETFARI 915 (1426)
Q Consensus 839 ~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~ 915 (1426)
.. +...+|||||+.|+|||++||+|++|||||||+++|.+... +.+|+|.|||.++.+ ...|+.
T Consensus 1149 rp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G~I~IDgvdI~~igL~dLRsr 1215 (1381)
T KOG0054|consen 1149 RP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEGEILIDGVDISKIGLHDLRSR 1215 (1381)
T ss_pred CC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCCeEEEcCeecccccHHHHHhc
Confidence 42 23469999999999999999999999999999999998766 358999999999876 356888
Q ss_pred EEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc------CCCCCCCCHHHHHHH
Q 000556 916 SGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVG------LPGVSGLSTEQRKRL 989 (1426)
Q Consensus 916 ~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg------~~~~~~LSgGqrqRl 989 (1426)
++.+||+|.++. -|+|.|| |+..+..|+.++++||..+|.+...++.+ .+++.++|.||||.+
T Consensus 1216 lsIIPQdPvLFs-GTvR~NL----------DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLl 1284 (1381)
T KOG0054|consen 1216 LSIIPQDPVLFS-GTVRFNL----------DPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLL 1284 (1381)
T ss_pred CeeeCCCCceec-Ccccccc----------CcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHH
Confidence 999999999886 4777776 56667778889999999999887765543 245689999999999
Q ss_pred HHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 990 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 990 ~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
|+||||+++++||+|||+|+++|++|...|+++||+-.+ +||||++.|+.+ ....+|||+||++ |+++.+|.+
T Consensus 1285 CLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~--TVmd~DrVlVld~-G~v~EfdsP 1357 (1381)
T KOG0054|consen 1285 CLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLN--TVMDSDRVLVLDA-GRVVEFDSP 1357 (1381)
T ss_pred HHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccc--hhhhcCeEEEeeC-CeEeecCCh
Confidence 999999999999999999999999999999999999764 799999999987 3455799999996 799999986
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3e-67 Score=705.98 Aligned_cols=216 Identities=27% Similarity=0.404 Sum_probs=188.8
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+..+|+++.++. +++.+|+|||+.|++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEEC
Confidence 4889999887741 125699999999999999999999999999999999998763 489999999886
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000556 908 KQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1426)
Q Consensus 908 ~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 985 (1426)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+..|+.+ +.|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 43 2235679999999999999999999998777653 233444567889999999999988875 5799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 986 rqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
||||+||+||+.+|+||||||||+|||+.+++.+++.|++++++|+|||+|+|+++ ++..+|||+++|++ |+++..|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999986 68889999999985 79999998
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 2154 ~ 2154 (2272)
T TIGR01257 2154 I 2154 (2272)
T ss_pred H
Confidence 5
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.3e-66 Score=708.29 Aligned_cols=211 Identities=24% Similarity=0.311 Sum_probs=179.5
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++|+||+++|+. +...+|+|||++|+|||++||+|+||||||||+++|.|..++ .+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p--~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVEL--ERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCEe
Confidence 46999999999842 123599999999999999999999999999999999998763 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 976 (1426)
+.+ ..+|+.++||||++.++.. |++|||.+.. +. .++.++++++..++.+.. |+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~----tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EH----NDADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CC----CHHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 765 3567889999999999875 9999996531 11 234588899988886543 5556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
..+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 46899999999999999999999999999999999999999999999885 4899999999986 4567999999986
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++.+|+.
T Consensus 1448 -G~IvE~Gt~ 1456 (1622)
T PLN03130 1448 -GRVVEFDTP 1456 (1622)
T ss_pred -CEEEEeCCH
Confidence 899999985
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.4e-66 Score=709.18 Aligned_cols=211 Identities=22% Similarity=0.282 Sum_probs=179.1
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++|+||+++|+. +.+.+|+|||++|+|||++||+|+||||||||+++|.|..++ .+|+|.+||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEL--EKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcC--CCceEEECCEE
Confidence 46999999999841 124699999999999999999999999999999999998763 58999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 976 (1426)
+.+ ..+|+.++||||++.+++. |++|||.+.. +. .++.++++++..++.+.. |+.+|..
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~----sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EH----NDADLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CC----CHHHHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 765 3567889999999999874 9999996421 12 234588899988886644 5556553
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
..+||||||||++|||||+++|+||+||||||+||+++++.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1369 -G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1369 -GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 46899999999999999999999999999999999999999999999875 4899999999985 4567999999985
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 1445 -G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 -GQVLEYDSP 1453 (1495)
T ss_pred -CEEEEECCH
Confidence 799999975
No 18
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.2e-65 Score=608.20 Aligned_cols=474 Identities=27% Similarity=0.342 Sum_probs=364.4
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-CCceeEEEEcCccCCCCCc-------cceEEEecCCC-
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS-LKVSGRVTYNGHDMGEFVP-------ERTAAYISQHD- 235 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 235 (1426)
..+++||||++.|||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++||+|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 56999999999999999999999999999999999999886 4568999999997654433 25799999996
Q ss_pred -CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccc
Q 000556 236 -NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1426)
Q Consensus 236 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1426)
.+-|.+||.+-+.-..+.++... ..+...++.++|+.+||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 46677899888876554443111 12334567889999999987654
Q ss_pred cccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCe
Q 000556 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1426)
Q Consensus 315 ~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~ 394 (1426)
+++++.|||||||||.||+||+.+|++|++||||++||..++.+|++.|+++.++ .++.++.++|+..-+.+++|+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e-~g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRE-LGMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHH-cCcEEEEEcCCHHHHHHhcCe
Confidence 6788999999999999999999999999999999999999999999999998764 577777799999999999999
Q ss_pred EEEecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhh
Q 000556 395 IILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKI 474 (1426)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1426)
|+||++|++|+.|+.+++.+- | ..||... +.++
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p-------------------------~hpYT~~----Ll~a---------- 257 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------P-------------------------QHPYTRG----LLAA---------- 257 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------c-------------------------CCcccHH----HHhh----------
Confidence 999999999999999988641 1 1111000 0000
Q ss_pred HHhhcCCccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccc
Q 000556 475 SDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDG 554 (1426)
Q Consensus 475 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~ 554 (1426)
.|. .... ..
T Consensus 258 -----~p~---------------------------------------------------------------~~~~---~~ 266 (539)
T COG1123 258 -----VPR---------------------------------------------------------------LGDE---KI 266 (539)
T ss_pred -----CCC---------------------------------------------------------------cccc---cc
Confidence 000 0000 00
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHH
Q 000556 555 GIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAG 634 (1426)
Q Consensus 555 ~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~ 634 (1426)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCCCccch
Q 000556 635 RFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESI 714 (1426)
Q Consensus 635 ~ff~~~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~ 714 (1426)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHhhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCc
Q 000556 715 GVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGED 794 (1426)
Q Consensus 715 g~~~L~~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1426)
...
T Consensus 267 ----------------------------------------------------------------~~~------------- 269 (539)
T COG1123 267 ----------------------------------------------------------------IRL------------- 269 (539)
T ss_pred ----------------------------------------------------------------ccc-------------
Confidence 000
Q ss_pred ccCCCCCcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEec
Q 000556 795 ISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMG 874 (1426)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G 874 (1426)
.. . .. .+ ...-++.+|++..+..+.... ....+...+++||||.+++||++||+|
T Consensus 270 ~~-----~-------~~----------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~GE~lglVG 324 (539)
T COG1123 270 PR-----R-------GP----------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLREGETLGLVG 324 (539)
T ss_pred cc-----c-------cc----------cc-cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecCCCEEEEEC
Confidence 00 0 00 00 001245566554444322110 000134579999999999999999999
Q ss_pred cCCCchhHHHhhhcCCCCCceEEEEEEEcCccC--Cc---ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCC
Q 000556 875 VSGAGKTTLMDVLSGRKTGGYITGNITISGYPK--KQ---ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEV 947 (1426)
Q Consensus 875 ~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~--~~---~~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~ 947 (1426)
+||||||||.++|+|...+ ..|.|.++|.+. +. ...++.+-+++|++ .+.|.+||++.+.-....... .
T Consensus 325 eSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~--~ 400 (539)
T COG1123 325 ESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGG--G 400 (539)
T ss_pred CCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcc--c
Confidence 9999999999999998874 479999999761 11 12345566677765 567999999999765444332 2
Q ss_pred CHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHH
Q 000556 948 DSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNT 1026 (1426)
Q Consensus 948 ~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~ 1026 (1426)
...++++++.++++.++|.+ ..+.. +..||||||||++|||||+.+|++|++|||||.||+..+..|.++|+++
T Consensus 401 ~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~l 475 (539)
T COG1123 401 SGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDL 475 (539)
T ss_pred chHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHH
Confidence 25666778999999999986 45555 4689999999999999999999999999999999999999999999999
Q ss_pred HhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1027 VDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1027 ~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
.++ |.|.|+++||... +.+.||||.+|++ |++|..||.
T Consensus 476 q~e~g~t~lfISHDl~v-V~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 476 QEELGLTYLFISHDLAV-VRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred HHHhCCEEEEEeCCHHH-HHhhCceEEEEEC-CeEEEeCCH
Confidence 876 9999999999874 7789999999985 899999985
No 19
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.5e-64 Score=689.15 Aligned_cols=211 Identities=18% Similarity=0.217 Sum_probs=179.4
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++|+||+++|+.. ...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 469999999998521 2359999999999999999999999999999999999876 347999999999
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 976 (1426)
+++ ..+|+.++||||++.+++. |++|||.... +. .++.++++++..++.+.. |+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~----sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QY----SDEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CC----CHHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 765 3467889999999999975 9999995211 12 234588899998887644 5556653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
..+||||||||++|||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 46899999999999999999999999999999999999999999999875 4899999999975 5677999999985
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 1495 -G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 -GEVAEFGAP 1503 (1522)
T ss_pred -CEEEEECCH
Confidence 899999985
No 20
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.3e-63 Score=676.66 Aligned_cols=217 Identities=18% Similarity=0.294 Sum_probs=180.6
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc------------
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG------------ 894 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~------------ 894 (1426)
..++|+||+|+|+.. ++.++|+|+|++|+||+.+||+||||||||||+++|.|...+.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 369999999999632 1236999999999999999999999999999999999976541
Q ss_pred ----------------------------------------eEEEEEEEcCccCCc---ccccceEEEeccCCCCCCCCCH
Q 000556 895 ----------------------------------------YITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTV 931 (1426)
Q Consensus 895 ----------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv 931 (1426)
+.+|+|++||.++.+ ..+++.+|||+|++.++. .|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccH
Confidence 147999999998764 456888999999999985 799
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEE
Q 000556 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-------LIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1004 (1426)
Q Consensus 932 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlL 1004 (1426)
+|||.|+. + +.+. +.++++++..++.+ -.|+.||.. ...||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~----~-~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK----E-DATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC----C-CCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99998852 1 2222 34777887777654 457788854 467999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHhhcceEEEEecC---cE-EEEEcCC
Q 000556 1005 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPGIDIFDAFDELFLMKRG---GQ-EIYVGPL 1066 (1426)
Q Consensus 1005 DEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g---g~-~v~~G~~ 1066 (1426)
|||||+||+.+++.|++.|+++. .+|+|+|+++|+++ ..+.+|+|++|++| |+ ++..|+.
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 35899999999985 56889999999973 66 4478874
No 21
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-63 Score=623.13 Aligned_cols=460 Identities=21% Similarity=0.293 Sum_probs=348.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 96 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKE 96 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCC
Confidence 46999999999999999999999999999999999999861 128999999998765432 2569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
+||+||+.++......+. .+ ..+....++++++.+||++..+..+
T Consensus 97 ~tv~e~l~~~~~~~~~~~-~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (506)
T PRK13549 97 LSVLENIFLGNEITPGGI-MD------------------------------YDAMYLRAQKLLAQLKLDINPATPV---- 141 (506)
T ss_pred CcHHHHhhhcccccccCC-cC------------------------------HHHHHHHHHHHHHHcCCCCCcccch----
Confidence 999999998653211000 00 0011234577899999987777655
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
+.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.+++|+|++|++
T Consensus 142 -~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvi~~tH~~~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 142 -GNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-H-GIACIYISHKLNEVKAISDTICVIRD 218 (506)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHHhcCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999864 3 44556678888999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHhhcC
Q 000556 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1426)
Q Consensus 401 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (1426)
|++++.|+.+++.. .+..+.
T Consensus 219 G~i~~~~~~~~~~~--------------------------------------------~~~~~~---------------- 238 (506)
T PRK13549 219 GRHIGTRPAAGMTE--------------------------------------------DDIITM---------------- 238 (506)
T ss_pred CEEeeecccccCCH--------------------------------------------HHHHHH----------------
Confidence 99999886543200 000000
Q ss_pred CccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccchhHHH
Q 000556 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1426)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~ 560 (1426)
+. . .. ..
T Consensus 239 ------------------------------------------------------------~~--~--~~-~~-------- 245 (506)
T PRK13549 239 ------------------------------------------------------------MV--G--RE-LT-------- 245 (506)
T ss_pred ------------------------------------------------------------hh--C--cC-cc--------
Confidence 00 0 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHHHHHHHH
Q 000556 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1426)
Q Consensus 561 lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 640 (1426)
T Consensus 246 -------------------------------------------------------------------------------- 245 (506)
T PRK13549 246 -------------------------------------------------------------------------------- 245 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHhh
Q 000556 641 LLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLK 720 (1426)
Q Consensus 641 l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~ 720 (1426)
.
T Consensus 246 ----------------------------------------------------------------------------~--- 246 (506)
T PRK13549 246 ----------------------------------------------------------------------------A--- 246 (506)
T ss_pred ----------------------------------------------------------------------------c---
Confidence 0
Q ss_pred ccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCcccCCCC
Q 000556 721 SRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNS 800 (1426)
Q Consensus 721 ~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1426)
.. + .. .
T Consensus 247 ----------------------------------~~-~---------------------~~-------------~----- 252 (506)
T PRK13549 247 ----------------------------------LY-P---------------------RE-------------P----- 252 (506)
T ss_pred ----------------------------------cc-c---------------------cc-------------c-----
Confidence 00 0 00 0
Q ss_pred CcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCch
Q 000556 801 SSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGK 880 (1426)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGK 880 (1426)
. .. + ..-+.++|+++.++.. +++.+|+||||+|++||++||+|+|||||
T Consensus 253 -~------------~~--~------~~~l~~~~l~~~~~~~----------~~~~vl~~vsl~i~~Ge~~~l~G~NGsGK 301 (506)
T PRK13549 253 -H------------TI--G------EVILEVRNLTAWDPVN----------PHIKRVDDVSFSLRRGEILGIAGLVGAGR 301 (506)
T ss_pred -c------------CC--C------CceEEEecCccccccc----------cccccccceeeEEcCCcEEEEeCCCCCCH
Confidence 0 00 0 0125667776554210 12358999999999999999999999999
Q ss_pred hHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHHHHHHHHHHhcCC--CCCCHHH
Q 000556 881 TTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESLLYSAWLRLP--PEVDSET 951 (1426)
Q Consensus 881 TTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~lTv~e~l~f~a~lr~~--~~~~~~~ 951 (1426)
|||+++|+|...+ +.+|+|.++|.++... ..++.++|++|++ .+++.+||.|++.+....... ...+...
T Consensus 302 STLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 380 (506)
T PRK13549 302 TELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAA 380 (506)
T ss_pred HHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHH
Confidence 9999999997642 1379999999875421 1244589999985 467889999999875321111 0112233
Q ss_pred HHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCC
Q 000556 952 RKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG 1030 (1426)
Q Consensus 952 ~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g 1030 (1426)
..+.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|++++++|
T Consensus 381 ~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g 455 (506)
T PRK13549 381 ELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQG 455 (506)
T ss_pred HHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCC
Confidence 445689999999996 5667664 5799999999999999999999999999999999999999999999998889
Q ss_pred CEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCCc
Q 000556 1031 RTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGR 1068 (1426)
Q Consensus 1031 ~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~~ 1068 (1426)
+|||+++|++. ++.+.||++++|++ |+++..|+.++
T Consensus 456 ~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 456 VAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred CEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 99999999986 57889999999986 78888887643
No 22
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-63 Score=627.24 Aligned_cols=487 Identities=21% Similarity=0.244 Sum_probs=353.3
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCC----------CCC-------ccce
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMG----------EFV-------PERT 227 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----------~~~-------~~~~ 227 (1426)
.++|+|||+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|..+. ... .++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999987 899999986431 111 1236
Q ss_pred EEEecCCC--CCCCCCCHHHHHHHhhhhc-CCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHH
Q 000556 228 AAYISQHD--NHIGEMTVRETLAFSARCQ-GVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1426)
Q Consensus 228 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1426)
++||+|++ .+++.+||+||+.++.+.. +.. + .+...+++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS-R---------------------------------EEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 99999987 5788899999999876432 110 0 012234677899
Q ss_pred HhCCcc---cccccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEE
Q 000556 305 VLGLEV---CADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISL 381 (1426)
Q Consensus 305 ~lgL~~---~~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~ 381 (1426)
.+||++ ..+ ..+..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.+.. +++||.+
T Consensus 152 ~~gL~~~~~~~~-----~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~-g~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILS-----RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM-SMGVIFI 225 (623)
T ss_pred HCCCCChhhHHh-----CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 999964 234 3455799999999999999999999999999999999999999999999987533 4456668
Q ss_pred ecCchhHHhhcCeEEEecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHH
Q 000556 382 LQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEF 461 (1426)
Q Consensus 382 ~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~ 461 (1426)
+|+..++.+++|+|++|++|++++.|+++++.+ -|.+....+ +
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~-----------------------------l 268 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRA-----------------------------L 268 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhh-----------------------------h
Confidence 999999999999999999999999998876521 000000000 0
Q ss_pred HHHHHhcccchhhHHhhcCCccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhh
Q 000556 462 AEAFQSFHVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLF 541 (1426)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f 541 (1426)
... .+
T Consensus 269 ~~~---------------~~------------------------------------------------------------ 273 (623)
T PRK10261 269 LAA---------------VP------------------------------------------------------------ 273 (623)
T ss_pred hhc---------------cC------------------------------------------------------------
Confidence 000 00
Q ss_pred hcccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhh
Q 000556 542 LRTKMHKHSLTDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVF 621 (1426)
Q Consensus 542 ~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~ 621 (1426)
.... .. .
T Consensus 274 ---~~~~--~~-~------------------------------------------------------------------- 280 (623)
T PRK10261 274 ---QLGA--MK-G------------------------------------------------------------------- 280 (623)
T ss_pred ---cccc--cc-c-------------------------------------------------------------------
Confidence 0000 00 0
Q ss_pred hheeccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCC
Q 000556 622 LTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGY 701 (1426)
Q Consensus 622 i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 701 (1426)
.
T Consensus 281 -------------------------------------------------------------------------------~ 281 (623)
T PRK10261 281 -------------------------------------------------------------------------------L 281 (623)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred cccccCCCCccchhHHHhhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeecccccccccccccc
Q 000556 702 SWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRG 781 (1426)
Q Consensus 702 ~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 781 (1426)
.... . . ..... . ..
T Consensus 282 ~~~~----~-------------~-----------------------------------~~~~~-------~-------~~ 295 (623)
T PRK10261 282 DYPR----R-------------F-----------------------------------PLISL-------E-------HP 295 (623)
T ss_pred cCCc----c-------------c-----------------------------------ccccc-------c-------cc
Confidence 0000 0 0 00000 0 00
Q ss_pred ccccccCCCCCCcccCCCCCcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeE
Q 000556 782 TVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLS 861 (1426)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs 861 (1426)
.. .... . ... .. +....-+.++|+++.++..... . ........+|+|||
T Consensus 296 ------~~---~~~~-----~-------~~~--~~------~~~~~~L~~~~l~~~y~~~~~~-~-~~~~~~~~~l~~vs 344 (623)
T PRK10261 296 ------AK---QEPP-----I-------EQD--TV------VDGEPILQVRNLVTRFPLRSGL-L-NRVTREVHAVEKVS 344 (623)
T ss_pred ------cc---cCcc-----c-------ccc--cc------cCCCceEEEeeeEEEEcCCCcc-c-cccCCceEEEeeeE
Confidence 00 0000 0 000 00 0001137888998877421000 0 00001246999999
Q ss_pred EEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcc------cccceEEEeccCC--CCCCCCCHHH
Q 000556 862 GAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE------TFARISGYCEQND--IHSPFVTVYE 933 (1426)
Q Consensus 862 ~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~q~~--~~~~~lTv~e 933 (1426)
|+|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++... .+++.++|++|++ .+++.+||.|
T Consensus 345 ~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~ 422 (623)
T PRK10261 345 FDLWPGETLSLVGESGSGKSTTGRALLRLVES--QGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGD 422 (623)
T ss_pred eEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHH
Confidence 99999999999999999999999999998753 479999999875421 2355799999997 4788999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCC
Q 000556 934 SLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1012 (1426)
Q Consensus 934 ~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD 1012 (1426)
++.+....+. ....+..++++.++++.+||. +..++. +..|||||||||+|||||+.+|+||||||||+|||
T Consensus 423 ~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD 495 (623)
T PRK10261 423 SIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQRQRICIARALALNPKVIIADEAVSALD 495 (623)
T ss_pred HHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 9987643321 112334456789999999996 556665 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1013 ARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1013 ~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
+.++..++++|++++++ |.|||++||+++ .+.+.+|++++|++ |+++..|+.
T Consensus 496 ~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~ 548 (623)
T PRK10261 496 VSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPR 548 (623)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999775 899999999986 57789999999986 799999875
No 23
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-63 Score=620.18 Aligned_cols=458 Identities=21% Similarity=0.288 Sum_probs=347.1
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 45999999999999999999999999999999999999987 9999999998765432 2469999999989999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
+||+||+.++..... ..+.. +..+ ..+....++.+++.+||.+..++.++
T Consensus 95 ~tv~e~l~~~~~~~~--~~~~~--------------~~~~-----------~~~~~~~~~~~l~~~gl~~~~~~~~~--- 144 (510)
T PRK09700 95 LTVLENLYIGRHLTK--KVCGV--------------NIID-----------WREMRVRAAMMLLRVGLKVDLDEKVA--- 144 (510)
T ss_pred CcHHHHhhhcccccc--ccccc--------------cccC-----------HHHHHHHHHHHHHHcCCCCCcccchh---
Confidence 999999987532100 00000 0000 00112346778999999887776554
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.+++|+|++|++
T Consensus 145 --~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 145 --NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-E-GTAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999865 3 44556688888999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHhhcC
Q 000556 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1426)
Q Consensus 401 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (1426)
|++++.|+++++.. ++..+..
T Consensus 221 G~i~~~g~~~~~~~--------------------------------------------~~~~~~~--------------- 241 (510)
T PRK09700 221 GSSVCSGMVSDVSN--------------------------------------------DDIVRLM--------------- 241 (510)
T ss_pred CEEeeecchhhCCH--------------------------------------------HHHHHHh---------------
Confidence 99999987654210 0000000
Q ss_pred CccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccchhHHH
Q 000556 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1426)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~ 560 (1426)
. . .. ..
T Consensus 242 -------------------------------------------------------------~--~--~~-~~-------- 247 (510)
T PRK09700 242 -------------------------------------------------------------V--G--RE-LQ-------- 247 (510)
T ss_pred -------------------------------------------------------------c--C--CC-cc--------
Confidence 0 0 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHHHHHHHH
Q 000556 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1426)
Q Consensus 561 lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 640 (1426)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHhh
Q 000556 641 LLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLK 720 (1426)
Q Consensus 641 l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~ 720 (1426)
....
T Consensus 248 ------------------------------------------------------------~~~~---------------- 251 (510)
T PRK09700 248 ------------------------------------------------------------NRFN---------------- 251 (510)
T ss_pred ------------------------------------------------------------cccc----------------
Confidence 0000
Q ss_pred ccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCcccCCCC
Q 000556 721 SRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNS 800 (1426)
Q Consensus 721 ~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1426)
.. .. ..
T Consensus 252 -------------------------------------~~--------------------~~-------------~~---- 257 (510)
T PRK09700 252 -------------------------------------AM--------------------KE-------------NV---- 257 (510)
T ss_pred -------------------------------------cc--------------------cc-------------cc----
Confidence 00 00 00
Q ss_pred CcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCch
Q 000556 801 SSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGK 880 (1426)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGK 880 (1426)
. . .. .+..+.++|++..+ + .+|+|+|+++++||+++|+|||||||
T Consensus 258 -~-------~----~~--------~~~~l~~~~l~~~~-------------~--~~l~~isl~i~~Ge~~~l~G~NGsGK 302 (510)
T PRK09700 258 -S-------N----LA--------HETVFEVRNVTSRD-------------R--KKVRDISFSVCRGEILGFAGLVGSGR 302 (510)
T ss_pred -c-------c----CC--------CCcEEEEeCccccC-------------C--CcccceeEEEcCCcEEEEECCCCCCH
Confidence 0 0 00 00136677776432 1 27999999999999999999999999
Q ss_pred hHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEeccC---CCCCCCCCHHHHHHHHHHhc---CCC--C-C
Q 000556 881 TTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQN---DIHSPFVTVYESLLYSAWLR---LPP--E-V 947 (1426)
Q Consensus 881 TTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~---~~~~~~lTv~e~l~f~a~lr---~~~--~-~ 947 (1426)
|||+++|+|..++ .+|+|.++|.+.... ..++.+||++|+ ..+++.+||.|++.+....+ ... . .
T Consensus 303 STLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 380 (510)
T PRK09700 303 TELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLF 380 (510)
T ss_pred HHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhcccccccccccccccccc
Confidence 9999999998653 479999999875421 224568999998 45778899999998653211 000 0 1
Q ss_pred CHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHH
Q 000556 948 DSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNT 1026 (1426)
Q Consensus 948 ~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~ 1026 (1426)
.....++.++++++.+++. +..++.+ ..|||||||||.||++|+.+|+||+|||||+|||+.++..+++.|+++
T Consensus 381 ~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l 455 (510)
T PRK09700 381 HEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQL 455 (510)
T ss_pred ChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHH
Confidence 1222335678999999996 6677764 579999999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1027 VDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1027 ~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
+++|.|||+++|++. ++.+.+|++++|++ |+++..++.
T Consensus 456 ~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 456 ADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred HHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 878999999999986 57889999999986 688888765
No 24
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.5e-63 Score=617.24 Aligned_cols=450 Identities=21% Similarity=0.330 Sum_probs=345.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 46999999999999999999999999999999999999987 9999999988754321 3469999999989999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
+||+||+.++.......... + ..+.+..++++++.+||++..|..++
T Consensus 94 ~tv~e~l~~~~~~~~~~~~~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~--- 140 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGRI-------------------D-----------WKKMYAEADKLLARLNLRFSSDKLVG--- 140 (501)
T ss_pred CcHHHHhhhccccccccCcc-------------------C-----------HHHHHHHHHHHHHHcCCCCCccCchh---
Confidence 99999999864321000000 0 00112345678999999987776554
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+.+++.++||+|++|++
T Consensus 141 --~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 141 --ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 6999999999999999999999999999999999999999999999864 3 44566678888999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHhhcC
Q 000556 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1426)
Q Consensus 401 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (1426)
|+++..|+.+++.. ++..+.+
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~~--------------- 237 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEMM--------------- 237 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHHh---------------
Confidence 99998876542100 0000000
Q ss_pred CccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccchhHHH
Q 000556 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1426)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~ 560 (1426)
+ . .. .
T Consensus 238 -------------------------------------------------------------~--~--~~-~--------- 242 (501)
T PRK10762 238 -------------------------------------------------------------V--G--RK-L--------- 242 (501)
T ss_pred -------------------------------------------------------------c--C--CC-c---------
Confidence 0 0 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHHHHHHHH
Q 000556 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1426)
Q Consensus 561 lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 640 (1426)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHhh
Q 000556 641 LLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLK 720 (1426)
Q Consensus 641 l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~ 720 (1426)
..
T Consensus 243 ---------------------------------------------------------------~~--------------- 244 (501)
T PRK10762 243 ---------------------------------------------------------------ED--------------- 244 (501)
T ss_pred ---------------------------------------------------------------cc---------------
Confidence 00
Q ss_pred ccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCcccCCCC
Q 000556 721 SRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNS 800 (1426)
Q Consensus 721 ~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1426)
. .+ .
T Consensus 245 -------------------------------------~---------------------~~-------------~----- 248 (501)
T PRK10762 245 -------------------------------------Q---------------------YP-------------R----- 248 (501)
T ss_pred -------------------------------------c---------------------cc-------------c-----
Confidence 0 00 0
Q ss_pred CcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCch
Q 000556 801 SSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGK 880 (1426)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGK 880 (1426)
. .. + + .+..+.++|++. .+|+|+||++++||++||+|||||||
T Consensus 249 -~------~~----~-------~-~~~~l~~~~l~~------------------~~l~~vsl~i~~Ge~~~liG~NGsGK 291 (501)
T PRK10762 249 -L------DK----A-------P-GEVRLKVDNLSG------------------PGVNDVSFTLRKGEILGVSGLMGAGR 291 (501)
T ss_pred -c------cc----C-------C-CCcEEEEeCccc------------------CCcccceEEEcCCcEEEEecCCCCCH
Confidence 0 00 0 0 001255666541 26999999999999999999999999
Q ss_pred hHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHHHHHHHHHHhcCC---CCCCHH
Q 000556 881 TTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESLLYSAWLRLP---PEVDSE 950 (1426)
Q Consensus 881 TTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~lTv~e~l~f~a~lr~~---~~~~~~ 950 (1426)
|||+++|+|...+ .+|+|.++|.++... ..++.+||++|++ .+++.+||.|++.+....... .....+
T Consensus 292 STLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 369 (501)
T PRK10762 292 TELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHA 369 (501)
T ss_pred HHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHH
Confidence 9999999998653 479999999875431 1345689999996 467889999999875321110 011223
Q ss_pred HHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC
Q 000556 951 TRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT 1029 (1426)
Q Consensus 951 ~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~ 1029 (1426)
..++.++++++.++|. +..++.+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++
T Consensus 370 ~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~ 444 (501)
T PRK10762 370 DEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAE 444 (501)
T ss_pred HHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHC
Confidence 3345688999999995 5667664 579999999999999999999999999999999999999999999999878
Q ss_pred CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCCc
Q 000556 1030 GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGR 1068 (1426)
Q Consensus 1030 g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~~ 1068 (1426)
|+|||+++|++. ++.+.+|++++|++ |+++..|+...
T Consensus 445 g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 445 GLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred CCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 999999999986 57889999999985 78988887653
No 25
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.7e-62 Score=669.30 Aligned_cols=211 Identities=24% Similarity=0.268 Sum_probs=179.8
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..+.|+||+++|+. +...+|+||||+|+|||++||+|+||||||||+++|.|... +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 46999999999852 22359999999999999999999999999999999999876 357999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 976 (1426)
+.+ ..+++.++||||++.++.. |++|||... .+. .++.++++++.+++.+. .|+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~----sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEA----SSAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCC----CHHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 765 3567889999999999874 999999431 112 23458899999998765 35666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 977 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~-p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
..+||||||||++|||||+++ |+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 468999999999999999996 89999999999999999999999999875 4799999999974 678899999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
+ |+++..|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 5 899999985
No 26
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.3e-62 Score=614.77 Aligned_cols=464 Identities=22% Similarity=0.277 Sum_probs=346.3
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCCCc-------cceEEEecCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHDMGEFVP-------ERTAAYISQHD 235 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1426)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 469999999999999999999999999999999999998610 138999999998754321 24699999986
Q ss_pred C--CCCCCCHHHHHHHhhhhc-CCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc--
Q 000556 236 N--HIGEMTVRETLAFSARCQ-GVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV-- 310 (1426)
Q Consensus 236 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-- 310 (1426)
. +.+.+||+|++.+..... +.. ..+...+++++++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------------------------------REAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHCCCCChH
Confidence 4 567789999987643211 100 0011234677899999975
Q ss_pred -cccccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHH
Q 000556 311 -CADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETY 389 (1426)
Q Consensus 311 -~~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~ 389 (1426)
..+.. +..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +.+||.++|+..++.
T Consensus 148 ~~~~~~-----~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDY-----PHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQEL-NMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhC-----CcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhc-CCeEEEEcCcHHHHH
Confidence 23544 45799999999999999999999999999999999999999999999986533 445556788888999
Q ss_pred hhcCeEEEecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcc
Q 000556 390 DLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFH 469 (1426)
Q Consensus 390 ~~fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1426)
+++|+|++|++|++++.|+.+++.+. |. .+ ..
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~-------------------------~~--------~~------- 253 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PT-------------------------HP--------YT------- 253 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CC-------------------------CH--------HH-------
Confidence 99999999999999999987654210 00 00 00
Q ss_pred cchhhHHhhcCCccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 000556 470 VGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKH 549 (1426)
Q Consensus 470 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~ 549 (1426)
+.+ +... ..
T Consensus 254 -----------------------------------------~~~----------------------------~~~~--~~ 262 (529)
T PRK15134 254 -----------------------------------------QKL----------------------------LNSE--PS 262 (529)
T ss_pred -----------------------------------------HHH----------------------------HHhC--cc
Confidence 000 0000 00
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheecccc
Q 000556 550 SLTDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGC 629 (1426)
Q Consensus 550 ~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl 629 (1426)
T Consensus 263 -------------------------------------------------------------------------------- 262 (529)
T PRK15134 263 -------------------------------------------------------------------------------- 262 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCC
Q 000556 630 DPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPN 709 (1426)
Q Consensus 630 ~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~ 709 (1426)
T Consensus 263 -------------------------------------------------------------------------------- 262 (529)
T PRK15134 263 -------------------------------------------------------------------------------- 262 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccchhHHHhhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCC
Q 000556 710 SYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARG 789 (1426)
Q Consensus 710 ~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1426)
. ..
T Consensus 263 --------------------------------------------------~-------------------~~-------- 265 (529)
T PRK15134 263 --------------------------------------------------G-------------------DP-------- 265 (529)
T ss_pred --------------------------------------------------c-------------------cc--------
Confidence 0 00
Q ss_pred CCCCcccCCCCCcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcE
Q 000556 790 ESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVL 869 (1426)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~ 869 (1426)
.. . . .. + +.-++++|+++.++...+. . +...+.+.+|+|||++|++||+
T Consensus 266 -----~~-----~-------~----~~--~------~~~l~~~~l~~~~~~~~~~-~-~~~~~~~~il~~isl~i~~Ge~ 314 (529)
T PRK15134 266 -----VP-----L-------P----EP--A------SPLLDVEQLQVAFPIRKGI-L-KRTVDHNVVVKNISFTLRPGET 314 (529)
T ss_pred -----cc-----c-------C----CC--C------CCcccccCcEEEeecCccc-c-ccccccceeeecceeEEcCCCE
Confidence 00 0 0 00 0 0025566666665311000 0 0000124699999999999999
Q ss_pred EEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHh
Q 000556 870 TALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE------TFARISGYCEQND--IHSPFVTVYESLLYSAWL 941 (1426)
Q Consensus 870 ~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~l 941 (1426)
+||+||||||||||+++|+|..+ .+|+|.++|.++... .+++.+||++|++ .+++.+||.|++.+....
T Consensus 315 ~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~ 391 (529)
T PRK15134 315 LGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRV 391 (529)
T ss_pred EEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHh
Confidence 99999999999999999999763 479999999875421 1245689999996 467889999999886533
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHH
Q 000556 942 RLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1020 (1426)
Q Consensus 942 r~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~ 1020 (1426)
+.. ..+....++.++++++.++|. +..+.. +..|||||||||+||++|+.+|++|+|||||+|||+.++..++
T Consensus 392 ~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~ 465 (529)
T PRK15134 392 HQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQIL 465 (529)
T ss_pred ccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHH
Confidence 211 122334456788999999997 456665 3579999999999999999999999999999999999999999
Q ss_pred HHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1021 RTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1021 ~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 466 ~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 466 ALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 999999875 899999999986 57788999999986 788888874
No 27
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=8e-62 Score=664.80 Aligned_cols=210 Identities=20% Similarity=0.240 Sum_probs=179.0
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++|+||+++|+. +.+.+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 46999999999852 12469999999999999999999999999999999999864 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 976 (1426)
+.+ ..+++.++||||++.+++. |++|||.... +..++.++++++.++|.+. .|+.+|..
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~----------~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~ 1350 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE----------QWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDG 1350 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc----------CCCHHHHHHHHHHCCCHHHHHhCccccccccccC
Confidence 765 3467889999999999974 9999994311 1224558999999998654 35556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
..+||||||||++|||||+++|+||+||||||+||..+...|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1351 -G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1351 -GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred -CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 46899999999999999999999999999999999999999999999875 4799999999975 5667999999986
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++.+|+.
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 799999875
No 28
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.6e-62 Score=610.65 Aligned_cols=453 Identities=20% Similarity=0.265 Sum_probs=343.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 45999999999999999999999999999999999999988 9999999988765432 2458999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
+||+||+.|+.... + +.+..++++++.+||++..+..++
T Consensus 101 ~tv~e~l~~~~~~~------~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (510)
T PRK15439 101 LSVKENILFGLPKR------Q--------------------------------ASMQKMKQLLAALGCQLDLDSSAG--- 139 (510)
T ss_pred CcHHHHhhcccccc------h--------------------------------HHHHHHHHHHHHcCCCccccCChh---
Confidence 99999998853210 0 011235678899999877776554
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.++||+|++|++
T Consensus 140 --~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 140 --SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQLADRISVMRD 215 (510)
T ss_pred --hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999864 3 44566688888999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHhhcC
Q 000556 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1426)
Q Consensus 401 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (1426)
|++++.|+.+++... + ..+.+.. .
T Consensus 216 G~i~~~g~~~~~~~~---------------~-----------------------------~~~~~~~------------~ 239 (510)
T PRK15439 216 GTIALSGKTADLSTD---------------D-----------------------------IIQAITP------------A 239 (510)
T ss_pred CEEEEecChHHcCHH---------------H-----------------------------HHHHHhC------------c
Confidence 999999987653210 0 0000000 0
Q ss_pred CccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccchhHHH
Q 000556 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1426)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~ 560 (1426)
..... ....
T Consensus 240 ----------------------------------------------------------------~~~~~-~~~~------ 248 (510)
T PRK15439 240 ----------------------------------------------------------------AREKS-LSAS------ 248 (510)
T ss_pred ----------------------------------------------------------------ccccc-cccc------
Confidence 00000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHHHHHHHH
Q 000556 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1426)
Q Consensus 561 lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 640 (1426)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHhh
Q 000556 641 LLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLK 720 (1426)
Q Consensus 641 l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~ 720 (1426)
. ..
T Consensus 249 ---------------------------------~---------------------------~~----------------- 251 (510)
T PRK15439 249 ---------------------------------Q---------------------------KL----------------- 251 (510)
T ss_pred ---------------------------------c---------------------------cc-----------------
Confidence 0 00
Q ss_pred ccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCcccCCCC
Q 000556 721 SRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNS 800 (1426)
Q Consensus 721 ~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1426)
...+ + ..
T Consensus 252 ~~~~--------------------------------------------------------~-------------~~---- 258 (510)
T PRK15439 252 WLEL--------------------------------------------------------P-------------GN---- 258 (510)
T ss_pred cccc--------------------------------------------------------c-------------cc----
Confidence 0000 0 00
Q ss_pred CcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCch
Q 000556 801 SSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGK 880 (1426)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGK 880 (1426)
. . . .+. .+.-+..+|++. .+|+|||+++++||++||+|||||||
T Consensus 259 -~-------~-~-~~~--------~~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l~G~NGsGK 302 (510)
T PRK15439 259 -R-------R-Q-QAA--------GAPVLTVEDLTG------------------EGFRNISLEVRAGEILGLAGVVGAGR 302 (510)
T ss_pred -c-------c-c-cCC--------CCceEEEeCCCC------------------CCccceeEEEcCCcEEEEECCCCCCH
Confidence 0 0 0 000 001256666651 15899999999999999999999999
Q ss_pred hHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHHHHHHHHHHhcCCCCCCHHHHH
Q 000556 881 TTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESLLYSAWLRLPPEVDSETRK 953 (1426)
Q Consensus 881 TTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~ 953 (1426)
|||+++|+|...+ .+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++......+.+........+
T Consensus 303 STLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~ 380 (510)
T PRK15439 303 TELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPAREN 380 (510)
T ss_pred HHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHH
Confidence 9999999998653 479999999875431 1234689999984 467889999998642111111001112233
Q ss_pred HHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCE
Q 000556 954 MFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT 1032 (1426)
Q Consensus 954 ~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~t 1032 (1426)
+.++++++.++|. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.+...+.+.|++++++|.|
T Consensus 381 ~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~t 455 (510)
T PRK15439 381 AVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVA 455 (510)
T ss_pred HHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCE
Confidence 5688999999997 6677764 579999999999999999999999999999999999999999999999888999
Q ss_pred EEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCC
Q 000556 1033 VVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1426)
Q Consensus 1033 vi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~ 1067 (1426)
||+++|++. ++.+.||++++|++ |+++..|..+
T Consensus 456 iIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 456 VLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred EEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 999999997 58889999999985 7888887654
No 29
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=4.6e-62 Score=611.35 Aligned_cols=445 Identities=23% Similarity=0.321 Sum_probs=342.0
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCceeEEEEcC-----------------------ccC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKL--DSSLKVSGRVTYNG-----------------------HDM 219 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~--~~~~~~~G~V~~~G-----------------------~~~ 219 (1426)
+.+|+|+|+.+.+|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999996 576 89999972 211
Q ss_pred C-------CC------CccceEEEecCC-CCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHH
Q 000556 220 G-------EF------VPERTAAYISQH-DNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYM 285 (1426)
Q Consensus 220 ~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~ 285 (1426)
. .. ..++.++||+|+ +.+++.+||+||+.|+....+...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~--------------------------- 142 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEG--------------------------- 142 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCH---------------------------
Confidence 0 00 013468999997 678888999999998654322100
Q ss_pred HHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHH
Q 000556 286 KAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNC 365 (1426)
Q Consensus 286 ~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~ 365 (1426)
.+...+++++++.+||++..+..+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.
T Consensus 143 -------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 210 (520)
T TIGR03269 143 -------KEAVGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA 210 (520)
T ss_pred -------HHHHHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH
Confidence 011234677899999987766544 47999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhh
Q 000556 366 LKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQY 445 (1426)
Q Consensus 366 L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~ 445 (1426)
|+++++.. +++|+.++|+...+.++||+|++|++|++++.|+++++.+.+.
T Consensus 211 l~~l~~~~-g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~---------------------------- 261 (520)
T TIGR03269 211 LEEAVKAS-GISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFM---------------------------- 261 (520)
T ss_pred HHHHHHhc-CcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHH----------------------------
Confidence 99986543 4456668888888999999999999999998887654321000
Q ss_pred hcccCCCCccCCHHHHHHHHHhcccchhhHHhhcCCccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHH
Q 000556 446 WTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIF 525 (1426)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~ 525 (1426)
+
T Consensus 262 -----------------~-------------------------------------------------------------- 262 (520)
T TIGR03269 262 -----------------E-------------------------------------------------------------- 262 (520)
T ss_pred -----------------h--------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHH
Q 000556 526 KLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSW 605 (1426)
Q Consensus 526 ~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~ 605 (1426)
... .
T Consensus 263 -------------------~~~-~-------------------------------------------------------- 266 (520)
T TIGR03269 263 -------------------GVS-E-------------------------------------------------------- 266 (520)
T ss_pred -------------------hch-h--------------------------------------------------------
Confidence 000 0
Q ss_pred HHHhhHHHHHHHHHhhhheeccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcH
Q 000556 606 ILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSP 685 (1426)
Q Consensus 606 l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp 685 (1426)
+
T Consensus 267 -------------------------------------------------------------------~------------ 267 (520)
T TIGR03269 267 -------------------------------------------------------------------V------------ 267 (520)
T ss_pred -------------------------------------------------------------------h------------
Confidence 0
Q ss_pred HHHHHHHHHHHHhcCCcccccCCCCccchhHHHhhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcce
Q 000556 686 MSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAV 765 (1426)
Q Consensus 686 ~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~ 765 (1426)
.+
T Consensus 268 --------------------------------------------------------------------------~~---- 269 (520)
T TIGR03269 268 --------------------------------------------------------------------------EK---- 269 (520)
T ss_pred --------------------------------------------------------------------------cc----
Confidence 00
Q ss_pred eeccccccccccccccccccccCCCCCCcccCCCCCcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhh
Q 000556 766 ITEESESNKQDNRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMK 845 (1426)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~ 845 (1426)
. . . . +. ...-++++|+++.++...
T Consensus 270 ---------------~-------------~------~-------~----~~--------~~~~l~~~~l~~~~~~~~--- 293 (520)
T TIGR03269 270 ---------------E-------------C------E-------V----EV--------GEPIIKVRNVSKRYISVD--- 293 (520)
T ss_pred ---------------c-------------c------c-------c----CC--------CCceEEEeccEEEeccCC---
Confidence 0 0 0 0 00 001267778877663100
Q ss_pred hcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEc-Ccc---CCc------ccccce
Q 000556 846 LQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITIS-GYP---KKQ------ETFARI 915 (1426)
Q Consensus 846 ~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~-g~~---~~~------~~~~~~ 915 (1426)
.+.+.+|+|+||+|++||++||+||||||||||+++|+|...+ .+|+|.++ |.+ ... ...++.
T Consensus 294 -----~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~ 366 (520)
T TIGR03269 294 -----RGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEP--TSGEVNVRVGDEWVDMTKPGPDGRGRAKRY 366 (520)
T ss_pred -----CCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEEecCCccccccccchhhHHHHhhh
Confidence 0124699999999999999999999999999999999998653 47999996 532 111 112456
Q ss_pred EEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-----cccccccCCCCCCCCHHHHHHHH
Q 000556 916 SGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-----LIQSLVGLPGVSGLSTEQRKRLT 990 (1426)
Q Consensus 916 ~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-----~~~~~vg~~~~~~LSgGqrqRl~ 990 (1426)
+||++|++.+++.+||.|++.+...+. .+.+..++.++++++.++|.+ ..++. +..|||||||||+
T Consensus 367 i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LSgGq~qrv~ 437 (520)
T TIGR03269 367 IGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELSEGERHRVA 437 (520)
T ss_pred EEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCCHHHHHHHH
Confidence 899999988889999999998754321 122333456889999999975 34555 3579999999999
Q ss_pred HHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 991 IAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 991 iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
||+||+.+|+||+|||||+|||+.+...+++.|++++++ |.|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 438 laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 438 LAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GKIVKIGDP 512 (520)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999999999999999999765 899999999986 57789999999985 788888864
No 30
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=5e-62 Score=608.54 Aligned_cols=459 Identities=18% Similarity=0.259 Sum_probs=344.4
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 46999999999999999999999999999999999998761 128999999998765432 2469999999989999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccc-cccccCc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCA-DTMVGDE 319 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-dt~vG~~ 319 (1426)
+||+||+.++......+.... ..+....++.+++.+||.+.. +..
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~---- 138 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRMA------------------------------YNAMYLRAKNLLRELQLDADNVTRP---- 138 (500)
T ss_pred CcHHHHHHhhccccccccccC------------------------------HHHHHHHHHHHHHHcCCCCCcccCc----
Confidence 999999988643210000000 001123457789999998654 333
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
+..|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++++ . +++|+.++|+..++.++||+|++|+
T Consensus 139 -~~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tviiitHd~~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 139 -VGDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-H-GVACVYISHKLNEVKAVCDTICVIR 215 (500)
T ss_pred -hhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCcHHHHHHhCCEEEEEe
Confidence 446999999999999999999999999999999999999999999999864 3 4556668889899999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHhhc
Q 000556 400 DGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELR 479 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 479 (1426)
+|++++.|+.+++.. +...+.
T Consensus 216 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 236 (500)
T TIGR02633 216 DGQHVATKDMSTMSE--------------------------------------------DDIITM--------------- 236 (500)
T ss_pred CCeEeeecCcccCCH--------------------------------------------HHHHHH---------------
Confidence 999987764321100 000000
Q ss_pred CCccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccchhHH
Q 000556 480 TPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAG 559 (1426)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g 559 (1426)
+. . .. .
T Consensus 237 -------------------------------------------------------------~~--~--~~-~-------- 242 (500)
T TIGR02633 237 -------------------------------------------------------------MV--G--RE-I-------- 242 (500)
T ss_pred -------------------------------------------------------------Hh--C--cc-c--------
Confidence 00 0 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHHHHHHH
Q 000556 560 ALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQ 639 (1426)
Q Consensus 560 ~lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~ 639 (1426)
T Consensus 243 -------------------------------------------------------------------------------- 242 (500)
T TIGR02633 243 -------------------------------------------------------------------------------- 242 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHh
Q 000556 640 YLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVL 719 (1426)
Q Consensus 640 ~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L 719 (1426)
+
T Consensus 243 ----------------------------------~--------------------------------------------- 243 (500)
T TIGR02633 243 ----------------------------------T--------------------------------------------- 243 (500)
T ss_pred ----------------------------------c---------------------------------------------
Confidence 0
Q ss_pred hccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCcccCCC
Q 000556 720 KSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRN 799 (1426)
Q Consensus 720 ~~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1426)
.. . + . .
T Consensus 244 ---~~-------------------------------~-~----------------------~-------------~---- 249 (500)
T TIGR02633 244 ---SL-------------------------------Y-P----------------------H-------------E---- 249 (500)
T ss_pred ---cc-------------------------------c-c----------------------c-------------c----
Confidence 00 0 0 0 0
Q ss_pred CCcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCc
Q 000556 800 SSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAG 879 (1426)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaG 879 (1426)
. . +. ...-+.++|+++.+... +++.+|+|+||++++||++||+||||||
T Consensus 250 --~-------~----~~--------~~~~l~~~~l~~~~~~~----------~~~~~l~~is~~i~~Ge~~~l~G~NGsG 298 (500)
T TIGR02633 250 --P-------H----EI--------GDVILEARNLTCWDVIN----------PHRKRVDDVSFSLRRGEILGVAGLVGAG 298 (500)
T ss_pred --c-------c----CC--------CCceEEEeCCccccccc----------ccccccccceeEEeCCcEEEEeCCCCCC
Confidence 0 0 00 00125677776544100 1235899999999999999999999999
Q ss_pred hhHHHhhhcCCCCCceEEEEEEEcCccCCc----ccccceEEEeccCC---CCCCCCCHHHHHHHHHH--hcCCCCCCHH
Q 000556 880 KTTLMDVLSGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSPFVTVYESLLYSAW--LRLPPEVDSE 950 (1426)
Q Consensus 880 KTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~---~~~~~lTv~e~l~f~a~--lr~~~~~~~~ 950 (1426)
|||||++|+|..++ ..+|+|.++|.++.. ...++.+||++|+. .+++.+||+|++.+... ..........
T Consensus 299 KSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~ 377 (500)
T TIGR02633 299 RTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAA 377 (500)
T ss_pred HHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHH
Confidence 99999999998652 137999999987642 12345689999995 47888999999987532 1100011223
Q ss_pred HHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC
Q 000556 951 TRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT 1029 (1426)
Q Consensus 951 ~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~ 1029 (1426)
..++.++++++.+++.+ ..++.+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++
T Consensus 378 ~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~ 452 (500)
T TIGR02633 378 AELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQE 452 (500)
T ss_pred HHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhC
Confidence 34456889999999964 466664 579999999999999999999999999999999999999999999999888
Q ss_pred CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1030 GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1030 g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
|.|||+++|++. ++.+.+|++++|++ |+++..++.
T Consensus 453 g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~ 487 (500)
T TIGR02633 453 GVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVN 487 (500)
T ss_pred CCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcc
Confidence 999999999986 57889999999985 788877754
No 31
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-61 Score=604.98 Aligned_cols=452 Identities=21% Similarity=0.303 Sum_probs=343.1
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999999887 9999999988754321 3569999999989999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
+||+||+.++......+.. + ..+....++.+++.+||++..+..+
T Consensus 94 ~tv~~~l~~~~~~~~~~~~--------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~---- 138 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGIV--------------------N-----------RRLLNYEAREQLEHLGVDIDPDTPL---- 138 (501)
T ss_pred CCHHHHHHhcccccccCCC--------------------C-----------HHHHHHHHHHHHHHcCCCCCcCCch----
Confidence 9999999985321000000 0 0011234567899999987666544
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++++ . +++||.++|+..++.+++|+|++|++
T Consensus 139 -~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 139 -KYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-E-GRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred -hhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999864 3 44556688888899999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHhhcC
Q 000556 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1426)
Q Consensus 401 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (1426)
|+++..++..+. .+.++..+.
T Consensus 216 G~i~~~~~~~~~-------------------------------------------~~~~~~~~~---------------- 236 (501)
T PRK11288 216 GRYVATFDDMAQ-------------------------------------------VDRDQLVQA---------------- 236 (501)
T ss_pred CEEEeecCcccc-------------------------------------------CCHHHHHHH----------------
Confidence 999865421100 000000000
Q ss_pred CccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccchhHHH
Q 000556 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1426)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g~ 560 (1426)
+. . .. ..
T Consensus 237 ------------------------------------------------------------~~--~--~~-~~-------- 243 (501)
T PRK11288 237 ------------------------------------------------------------MV--G--RE-IG-------- 243 (501)
T ss_pred ------------------------------------------------------------hc--C--CC-cc--------
Confidence 00 0 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHHHHHHHH
Q 000556 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1426)
Q Consensus 561 lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 640 (1426)
T Consensus 244 -------------------------------------------------------------------------------- 243 (501)
T PRK11288 244 -------------------------------------------------------------------------------- 243 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHhh
Q 000556 641 LLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLK 720 (1426)
Q Consensus 641 l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~ 720 (1426)
T Consensus 244 -------------------------------------------------------------------------------- 243 (501)
T PRK11288 244 -------------------------------------------------------------------------------- 243 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCcccCCCC
Q 000556 721 SRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNS 800 (1426)
Q Consensus 721 ~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1426)
.. . . ..
T Consensus 244 --~~-------------------------------~------------------------~-------------~~---- 249 (501)
T PRK11288 244 --DI-------------------------------Y------------------------G-------------YR---- 249 (501)
T ss_pred --cc-------------------------------c------------------------c-------------cc----
Confidence 00 0 0 00
Q ss_pred CcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCch
Q 000556 801 SSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGK 880 (1426)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGK 880 (1426)
. . +. .+..+.++|+++. .+++|+|++|++||++||+|||||||
T Consensus 250 -~-------~----~~--------~~~~l~~~~~~~~-----------------~~l~~isl~i~~Ge~~~iiG~NGsGK 292 (501)
T PRK11288 250 -P-------R----PL--------GEVRLRLDGLKGP-----------------GLREPISFSVRAGEIVGLFGLVGAGR 292 (501)
T ss_pred -c-------c----CC--------CCcEEEEeccccC-----------------CcccceeEEEeCCcEEEEEcCCCCCH
Confidence 0 0 00 0113566666521 38999999999999999999999999
Q ss_pred hHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHHHHHHHHHHhcC-CCC--CCHH
Q 000556 881 TTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESLLYSAWLRL-PPE--VDSE 950 (1426)
Q Consensus 881 TTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~lTv~e~l~f~a~lr~-~~~--~~~~ 950 (1426)
|||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++.+...... +.. ....
T Consensus 293 STLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 370 (501)
T PRK11288 293 SELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNR 370 (501)
T ss_pred HHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChH
Confidence 999999999865 3479999999865421 1245689999986 47888999999986432111 000 0122
Q ss_pred HHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC
Q 000556 951 TRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT 1029 (1426)
Q Consensus 951 ~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~ 1029 (1426)
..++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.+...+++.|++++++
T Consensus 371 ~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~ 445 (501)
T PRK11288 371 WEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQ 445 (501)
T ss_pred HHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhC
Confidence 2345688999999994 6677764 479999999999999999999999999999999999999999999999888
Q ss_pred CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCCcc
Q 000556 1030 GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRH 1069 (1426)
Q Consensus 1030 g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~~~ 1069 (1426)
|.|||+++|++. ++.+.+|++++|++ |++++.|..++.
T Consensus 446 g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~~ 483 (501)
T PRK11288 446 GVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQA 483 (501)
T ss_pred CCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEccccC
Confidence 999999999986 58899999999985 789999987643
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-61 Score=597.43 Aligned_cols=450 Identities=18% Similarity=0.258 Sum_probs=341.0
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 56999999999999999999999999999999999999987 9999999998754322 3569999999888999
Q ss_pred CCHHHHHHHhhh-hcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000556 241 MTVRETLAFSAR-CQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1426)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1426)
+||+||+.++.. ..+... + ..+....++.+++.+||++..++.+
T Consensus 88 ~tv~~~l~~~~~~~~~~~~---------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~--- 132 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFV---------------------D-----------QDKMYRDTKAIFDELDIDIDPRAKV--- 132 (491)
T ss_pred CCHHHHhhccccccccccc---------------------C-----------HHHHHHHHHHHHHHcCCCCCccCch---
Confidence 999999987532 111000 0 0001224567899999987776555
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
..|||||||||+||++|+.+|++|+|||||+|||+.+..++.+.|+++++ . +.+|+.++|+.+++.++||+|++|+
T Consensus 133 --~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 133 --ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-R-GCGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999864 3 4455557888899999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHhhc
Q 000556 400 DGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELR 479 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 479 (1426)
+|+++..|+.+++.. ++..+.+
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~~-------------- 230 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAMM-------------- 230 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHHH--------------
Confidence 999998886542100 0000000
Q ss_pred CCccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccchhHH
Q 000556 480 TPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAG 559 (1426)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~g 559 (1426)
. + .. .
T Consensus 231 --------------------------------------------------------------~--~--~~-~-------- 235 (491)
T PRK10982 231 --------------------------------------------------------------V--G--RS-L-------- 235 (491)
T ss_pred --------------------------------------------------------------h--C--CC-c--------
Confidence 0 0 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHHHHHHH
Q 000556 560 ALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQ 639 (1426)
Q Consensus 560 ~lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~ 639 (1426)
T Consensus 236 -------------------------------------------------------------------------------- 235 (491)
T PRK10982 236 -------------------------------------------------------------------------------- 235 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCCCccchhHHHh
Q 000556 640 YLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVL 719 (1426)
Q Consensus 640 ~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L 719 (1426)
.
T Consensus 236 -----------------------------------------------------------------~-------------- 236 (491)
T PRK10982 236 -----------------------------------------------------------------T-------------- 236 (491)
T ss_pred -----------------------------------------------------------------c--------------
Confidence 0
Q ss_pred hccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCcccCCC
Q 000556 720 KSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRN 799 (1426)
Q Consensus 720 ~~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1426)
. ... ..
T Consensus 237 --------------------------------------~--------------------~~~-------------~~--- 242 (491)
T PRK10982 237 --------------------------------------Q--------------------RFP-------------DK--- 242 (491)
T ss_pred --------------------------------------c--------------------ccc-------------cc---
Confidence 0 000 00
Q ss_pred CCcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCc
Q 000556 800 SSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAG 879 (1426)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaG 879 (1426)
. . . + .+..+.++|+++.. +.+|+|||+.+++||++||+||||||
T Consensus 243 --~-------~----~-------~-~~~~i~~~~l~~~~---------------~~~l~~vsl~i~~Ge~~~l~G~nGsG 286 (491)
T PRK10982 243 --E-------N----K-------P-GEVILEVRNLTSLR---------------QPSIRDVSFDLHKGEILGIAGLVGAK 286 (491)
T ss_pred --c-------C----C-------C-CCcEEEEeCccccc---------------CcccceeeEEEeCCcEEEEecCCCCC
Confidence 0 0 0 0 01136777776641 13899999999999999999999999
Q ss_pred hhHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEeccCCC---CCCCCCHHHHHHHHH--HhcCCCC-CCH
Q 000556 880 KTTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQNDI---HSPFVTVYESLLYSA--WLRLPPE-VDS 949 (1426)
Q Consensus 880 KTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~~---~~~~lTv~e~l~f~a--~lr~~~~-~~~ 949 (1426)
||||+++|+|..++ .+|+|.++|.++... ..++.++|++|+.. +++.+|+.++..+.. ....... ...
T Consensus 287 KSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (491)
T PRK10982 287 RTDIVETLFGIREK--SAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDN 364 (491)
T ss_pred HHHHHHHHcCCCcC--CccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCc
Confidence 99999999998753 479999999876432 12445899999853 577888877743221 0000001 122
Q ss_pred HHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh
Q 000556 950 ETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD 1028 (1426)
Q Consensus 950 ~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~ 1028 (1426)
...++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|+++.+
T Consensus 365 ~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~ 439 (491)
T PRK10982 365 SRMKSDTQWVIDSMRVKTPGHRTQI-----GSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAK 439 (491)
T ss_pred HHHHHHHHHHHHhcCccCCCccccc-----ccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHH
Confidence 23345678899999995 4556653 57999999999999999999999999999999999999999999999988
Q ss_pred CCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCC
Q 000556 1029 TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1426)
Q Consensus 1029 ~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~ 1067 (1426)
+|+|||++||+++ ++.+.+|++++|++ |+++..++..
T Consensus 440 ~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 440 KDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred CCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 8999999999986 57889999999986 7888777653
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=9e-60 Score=586.81 Aligned_cols=447 Identities=19% Similarity=0.256 Sum_probs=329.0
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCC--C-
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNH--I- 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~--~- 238 (1426)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.. +
T Consensus 16 ~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (490)
T PRK10938 16 TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLS 92 (490)
T ss_pred eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhcc
Confidence 35899999999999999999999999999999999999987 9999999976643321 2458999997542 1
Q ss_pred -----CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccc
Q 000556 239 -----GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCAD 313 (1426)
Q Consensus 239 -----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1426)
..+||+|++.+.. +...+++.+++.+||++..+
T Consensus 93 ~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~ 130 (490)
T PRK10938 93 PGEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLD 130 (490)
T ss_pred cchhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhh
Confidence 1457777664310 01123567889999988777
Q ss_pred ccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcC
Q 000556 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1426)
Q Consensus 314 t~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD 393 (1426)
..++ .|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ . +.+||.++|+..++.+.||
T Consensus 131 ~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tvii~tH~~~~~~~~~d 203 (490)
T PRK10938 131 RRFK-----YLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQ-S-GITLVLVLNRFDEIPDFVQ 203 (490)
T ss_pred CCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCeEEEEeCCHHHHHhhCC
Confidence 6554 6999999999999999999999999999999999999999999999865 3 4455557888889999999
Q ss_pred eEEEecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchh
Q 000556 394 DIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQK 473 (1426)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1426)
+|++|++|+++++|+++++.+- +.+. .+. .
T Consensus 204 ~v~~l~~G~i~~~~~~~~~~~~---------------~~~~-------------------------~~~---~------- 233 (490)
T PRK10938 204 FAGVLADCTLAETGEREEILQQ---------------ALVA-------------------------QLA---H------- 233 (490)
T ss_pred EEEEEECCEEEEeCCHHHHhcc---------------hhhh-------------------------hhh---h-------
Confidence 9999999999999987654210 0000 000 0
Q ss_pred hHHhhcCCccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccc
Q 000556 474 ISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTD 553 (1426)
Q Consensus 474 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~ 553 (1426)
. + .... ..
T Consensus 234 ------------------------------------~-------~--------------------------~~~~--~~- 241 (490)
T PRK10938 234 ------------------------------------S-------E--------------------------QLEG--VQ- 241 (490)
T ss_pred ------------------------------------h-------h--------------------------ccCc--cc-
Confidence 0 0 0000 00
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCH
Q 000556 554 GGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNA 633 (1426)
Q Consensus 554 ~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~ 633 (1426)
T Consensus 242 -------------------------------------------------------------------------------- 241 (490)
T PRK10938 242 -------------------------------------------------------------------------------- 241 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCCCccc
Q 000556 634 GRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYES 713 (1426)
Q Consensus 634 ~~ff~~~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~ 713 (1426)
.|
T Consensus 242 ---------------------------------------~~--------------------------------------- 243 (490)
T PRK10938 242 ---------------------------------------LP--------------------------------------- 243 (490)
T ss_pred ---------------------------------------cC---------------------------------------
Confidence 00
Q ss_pred hhHHHhhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCC
Q 000556 714 IGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGE 793 (1426)
Q Consensus 714 ~g~~~L~~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1426)
. . ...
T Consensus 244 -----------------------------------------------~--~--------------~~~------------ 248 (490)
T PRK10938 244 -----------------------------------------------E--P--------------DEP------------ 248 (490)
T ss_pred -----------------------------------------------c--c--------------ccc------------
Confidence 0 0 000
Q ss_pred cccCCCCCcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEe
Q 000556 794 DISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALM 873 (1426)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 873 (1426)
. . +... . .....++++|+++.++ ++.+|+|+||.+++||+++|+
T Consensus 249 -~------~--------~~~~-~-------~~~~~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~ 292 (490)
T PRK10938 249 -S------A--------RHAL-P-------ANEPRIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIV 292 (490)
T ss_pred -c------c--------cccc-C-------CCCceEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEE
Confidence 0 0 0000 0 0011378889888763 245999999999999999999
Q ss_pred ccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc----ccccceEEEeccCCCCCC--CCCHHHHHHHHHHh--cCCC
Q 000556 874 GVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQNDIHSP--FVTVYESLLYSAWL--RLPP 945 (1426)
Q Consensus 874 G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~~~~~--~lTv~e~l~f~a~l--r~~~ 945 (1426)
||||||||||+++|+|.... ..+|+|.++|.+... ...++.+||++|++.+.+ ..|+++++.+.... ....
T Consensus 293 G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (490)
T PRK10938 293 GPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQ 371 (490)
T ss_pred CCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhcccccccccc
Confidence 99999999999999996431 137999999976422 123456899999875543 24677766543211 1111
Q ss_pred CCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHH
Q 000556 946 EVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR 1024 (1426)
Q Consensus 946 ~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~ 1024 (1426)
... ...++.++++++.++|.+ ..++.+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+
T Consensus 372 ~~~-~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~ 445 (490)
T PRK10938 372 AVS-DRQQKLAQQWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVD 445 (490)
T ss_pred CCC-HHHHHHHHHHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHH
Confidence 111 223456889999999987 677664 5799999999999999999999999999999999999999999999
Q ss_pred HHHhCC-CEEEEEecCCCHHHHh-hcceEEEEecCcEEEEE
Q 000556 1025 NTVDTG-RTVVCTIHQPGIDIFD-AFDELFLMKRGGQEIYV 1063 (1426)
Q Consensus 1025 ~~~~~g-~tvi~~~Hq~~~~i~~-~fD~v~ll~~gg~~v~~ 1063 (1426)
+++++| .|||+++|++. ++.+ .+|++++|++ |+++..
T Consensus 446 ~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~ 484 (490)
T PRK10938 446 VLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRY 484 (490)
T ss_pred HHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEe
Confidence 998775 46999999986 4655 5899999986 566554
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=4.5e-58 Score=510.59 Aligned_cols=470 Identities=25% Similarity=0.323 Sum_probs=367.0
Q ss_pred ccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCCCcc-------ceEEEecC
Q 000556 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFVPE-------RTAAYISQ 233 (1426)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~~~-------~~~~yv~Q 233 (1426)
....++++|||.|++||.+||+|.||||||-..+.+.|+++.. ...+|+|.|+|+++-....+ ..|+.|+|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 3467999999999999999999999999999999999999763 45689999999987554432 36899999
Q ss_pred CC--CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccc
Q 000556 234 HD--NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVC 311 (1426)
Q Consensus 234 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1426)
+| .+.|-.|+..-|.-..+++... ...+++.++-++|+..|+.+-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg~---------------------------------~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRGL---------------------------------SRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhcc---------------------------------cHHHHHHHHHHHHHHcCCCch
Confidence 97 4667777777776555543111 112234567788999999876
Q ss_pred ccccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhh
Q 000556 312 ADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDL 391 (1426)
Q Consensus 312 ~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~ 391 (1426)
...+ +.++.+|||||||||.||.||+++|++|+-||||++||.....+|.+.|+++-.. -+..++.|+|+..-+-.+
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~-~gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAE-LGMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHH-hCcEEEEEeccHHHHHHh
Confidence 5433 4678899999999999999999999999999999999999999999999998765 456677799999999999
Q ss_pred cCeEEEecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccc
Q 000556 392 FDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVG 471 (1426)
Q Consensus 392 fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (1426)
+|+|+||.+|+++++|+.+.+.. .|. .||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~Pq-------------------------HpYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQ-------------------------HPYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCC-------------------------ChHH-----------------
Confidence 99999999999999998876532 111 0000
Q ss_pred hhhHHhhcCCccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 000556 472 QKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSL 551 (1426)
Q Consensus 472 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~ 551 (1426)
|.++ .
T Consensus 255 ---------------------------------------r~Ll------------------------------~------ 259 (534)
T COG4172 255 ---------------------------------------RKLL------------------------------A------ 259 (534)
T ss_pred ---------------------------------------HHHH------------------------------h------
Confidence 0000 0
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCC
Q 000556 552 TDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDP 631 (1426)
Q Consensus 552 ~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~ 631 (1426)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCCCc
Q 000556 632 NAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSY 711 (1426)
Q Consensus 632 ~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~ 711 (1426)
. | |.
T Consensus 260 ----------------------------------------a------------------------e----------P~-- 263 (534)
T COG4172 260 ----------------------------------------A------------------------E----------PS-- 263 (534)
T ss_pred ----------------------------------------c------------------------C----------CC--
Confidence 0 0 00
Q ss_pred cchhHHHhhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCC
Q 000556 712 ESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGES 791 (1426)
Q Consensus 712 ~~~g~~~L~~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1426)
.
T Consensus 264 -----------------------------------------------------------------------------g-- 264 (534)
T COG4172 264 -----------------------------------------------------------------------------G-- 264 (534)
T ss_pred -----------------------------------------------------------------------------C--
Confidence 0
Q ss_pred CCcccCCCCCcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEE
Q 000556 792 GEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTA 871 (1426)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 871 (1426)
. . .. ..+..|.-++.+|+...++.+..+-. ...+...++++||++.++||.+|
T Consensus 265 ---~--------------~-~p-------~~~~~~~ll~~~~v~v~f~i~~g~~~--r~~~~~~AVd~isl~L~~gqTlG 317 (534)
T COG4172 265 ---D--------------P-PP-------LPEDAPVLLEVEDLRVWFPIKGGFLR--RTVDHLRAVDGISLTLRRGQTLG 317 (534)
T ss_pred ---C--------------C-CC-------CCCCCCceEEecceEEEEecCCcccc--ccchheEEeccceeEecCCCeEE
Confidence 0 0 00 00011234566666655554422110 01234579999999999999999
Q ss_pred EeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcc------cccceEEEeccCCC--CCCCCCHHHHHHHHHHhcC
Q 000556 872 LMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE------TFARISGYCEQNDI--HSPFVTVYESLLYSAWLRL 943 (1426)
Q Consensus 872 l~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~ 943 (1426)
|+|.||||||||-.+|.+.... +|+|.++|.++... ..++.+-.|+|++. +.|.+||.+-+.-+.....
T Consensus 318 lVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~ 394 (534)
T COG4172 318 LVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHE 394 (534)
T ss_pred EEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcC
Confidence 9999999999999999987653 59999999987642 34667889999984 6799999999887766655
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHH
Q 000556 944 PPEVDSETRKMFIEEVMELVELKPLI-QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT 1022 (1426)
Q Consensus 944 ~~~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~ 1022 (1426)
| ..+..++++++.++|+.+||++.. +.. +..+|||||||++|||||+-+|++++||||||.||..-+..|.++
T Consensus 395 ~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~L 468 (534)
T COG4172 395 P-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDL 468 (534)
T ss_pred C-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHH
Confidence 4 457788999999999999998743 332 468999999999999999999999999999999999999999999
Q ss_pred HHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1023 VRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1023 l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
|+++.++ |.+-++++||.. -+-.+||+|+||++ |++|..||.
T Consensus 469 Lr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 469 LRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred HHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 9999754 999999999986 47789999999985 899999996
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.7e-57 Score=572.63 Aligned_cols=201 Identities=22% Similarity=0.303 Sum_probs=164.6
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQP--DSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECC-c-
Confidence 488999988763 24699999999999999999999999999999999998653 479999854 1
Q ss_pred CcccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000556 908 KQETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQ 985 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~-~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGq 985 (1426)
..+||++|+. .+++.+||.|++.+....+. .... ...++++++.+++.+ ..+..+ ..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKKV-----GVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999986 67788999999987643221 1111 123457899999964 456653 5799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEE-EEc
Q 000556 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YVG 1064 (1426)
Q Consensus 986 rqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v-~~G 1064 (1426)
||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. | |||+++|++. .+...+|++++|++||+++ +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999986 5778899999998767776 444
Q ss_pred C
Q 000556 1065 P 1065 (1426)
Q Consensus 1065 ~ 1065 (1426)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-57 Score=565.71 Aligned_cols=198 Identities=18% Similarity=0.265 Sum_probs=164.6
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEP--DSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCc--
Confidence 488999998873 23599999999999999999999999999999999998653 4799999873
Q ss_pred CcccccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000556 908 KQETFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgG 984 (1426)
+.+||++|+.. +.+.+|++|++.+.. .. . ..++.++++++.+++. +..+..+ ..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKSV-----KVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCcc-----cccCHH
Confidence 45899999864 456789999986421 11 1 1134578899999994 5666654 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEE-EE
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YV 1063 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v-~~ 1063 (1426)
||||++||++|+.+|+||+|||||+|||+.+...+++.|+++ +.|||++||++. .+.+.+|++++|++ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999886 459999999986 57788999999986 5666 77
Q ss_pred cCC
Q 000556 1064 GPL 1066 (1426)
Q Consensus 1064 G~~ 1066 (1426)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=4.1e-56 Score=560.14 Aligned_cols=201 Identities=20% Similarity=0.277 Sum_probs=164.0
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.+. ++.+|+|||++|++|++++|+||||||||||+++|+|...+ .+|+|.+++.
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQP--DSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCeEEEECCc--
Confidence 488999988763 24699999999999999999999999999999999998653 4799998541
Q ss_pred CcccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000556 908 KQETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQ 985 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~-~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGq 985 (1426)
..+||++|+. .+++.+||.|++.+...... .... +..++++++.+++.+ ..+..+ ..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKV-----GQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999986 47788999999987542211 1111 123567899999964 456653 5799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEE-EEc
Q 000556 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YVG 1064 (1426)
Q Consensus 986 rqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v-~~G 1064 (1426)
||||+||++|+.+|++|+|||||+|||+.+...+++.|+++. .|||+++|++. .+.+.+|++++|++||+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999873 48999999986 5778899999998767766 444
Q ss_pred C
Q 000556 1065 P 1065 (1426)
Q Consensus 1065 ~ 1065 (1426)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 38
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-54 Score=547.84 Aligned_cols=197 Identities=21% Similarity=0.354 Sum_probs=161.3
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 488999988773 3469999999999999999999999999999999999865 34799998641
Q ss_pred CcccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHH
Q 000556 908 KQETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgG 984 (1426)
..+||++|+. .+.+..|+.+++.- .. + ......+.++++.+++.. ..++.+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~~-~-----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---LA-P-----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---hC-c-----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34456677776531 11 1 112345789999999964 566664 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEE-EE
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YV 1063 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v-~~ 1063 (1426)
|||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||+++|++. .+...||++++|++ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 349999999986 47788999999986 6776 77
Q ss_pred cCC
Q 000556 1064 GPL 1066 (1426)
Q Consensus 1064 G~~ 1066 (1426)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 775
No 39
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=5.7e-55 Score=546.82 Aligned_cols=211 Identities=20% Similarity=0.234 Sum_probs=172.5
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ + ..|+++|+++++||++||+||||||||||+++|+|...+ .+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p--~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKP--DEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEEe----
Confidence 478888887653 1 258999999999999999999999999999999998653 47999885
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000556 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 987 (1426)
..++|++|+..+.+.+||+|++.+..... .. ...++++++.++|.+..++.+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~~-----~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDDL-----GS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhhc-----Ch---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 14899999988888899999998742111 11 124688999999998877764 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 988 Rl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
||+||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|++. .+...+|++++|+ | ++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeec
Confidence 999999999999999999999999999999999999999764 899999999986 4778899999996 3 77766764
Q ss_pred Ccc---hhHHHHHHHhC
Q 000556 1067 GRH---SCQLISYFEAI 1080 (1426)
Q Consensus 1067 ~~~---~~~~~~yf~~~ 1080 (1426)
... ...+-.|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 322 12334556665
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.2e-53 Score=542.25 Aligned_cols=202 Identities=24% Similarity=0.331 Sum_probs=163.7
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ ++.+|+|||+.|++|+++||+|||||||||||++|+|... +.+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 478999988763 3469999999999999999999999999999999999865 34799988 4321
Q ss_pred CcccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHH
Q 000556 908 KQETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQ 985 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~-~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGq 985 (1426)
.+||++|+. .+++.+||.|++.+..... .... ....+.++++.+++. +..++.+ ..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~~--~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVNG--RPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccc---cccc--hHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 489999975 5778899999998643211 1111 123577889999986 4566654 5799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe-cCcEEEEEc
Q 000556 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK-RGGQEIYVG 1064 (1426)
Q Consensus 986 rqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~-~gg~~v~~G 1064 (1426)
||||+||++|+.+|++|||||||+|||..+...+.+.|+++ +.|||++||+.. .+...+|++++++ +|.-..|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999986 4778899999997 544445666
Q ss_pred CC
Q 000556 1065 PL 1066 (1426)
Q Consensus 1065 ~~ 1066 (1426)
..
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 54
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-53 Score=503.84 Aligned_cols=450 Identities=22% Similarity=0.348 Sum_probs=350.1
Q ss_pred CcccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc----ceEEEecCCCC
Q 000556 161 RKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHDN 236 (1426)
Q Consensus 161 ~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~ 236 (1426)
+....++|+|||+.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.+||++.....++ .-|+.|.|+..
T Consensus 17 ~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~ 93 (500)
T COG1129 17 SFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELS 93 (500)
T ss_pred EcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechh
Confidence 335578999999999999999999999999999999999999998 99999999988765553 45889999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1426)
+.|+|||.|||.++........ .+ +..+....+..+|+.+|++...++.|
T Consensus 94 L~p~LsVaeNifLgre~~~~~g---~i---------------------------d~~~m~~~A~~~l~~lg~~~~~~~~v 143 (500)
T COG1129 94 LVPNLSVAENIFLGREPTRRFG---LI---------------------------DRKAMRRRARELLARLGLDIDPDTLV 143 (500)
T ss_pred ccCCccHHHHhhcccccccCCC---cc---------------------------CHHHHHHHHHHHHHHcCCCCChhhhh
Confidence 9999999999988754322000 00 01122345677899999975578888
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
|+ ||+||||-|.||||+..++++++|||||+.|+...+..+++.++++.. ++..||.++|..+|++++||+|.
T Consensus 144 ~~-----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~Ei~~i~Drit 216 (500)
T COG1129 144 GD-----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDEVFEIADRIT 216 (500)
T ss_pred hh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHHHHHhcCEEE
Confidence 74 999999999999999999999999999999999999999999999863 56777889999999999999999
Q ss_pred EecCCeEEEecCh-hhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhH
Q 000556 397 LLSDGQIVYQGPR-ELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKIS 475 (1426)
Q Consensus 397 lL~~G~iv~~G~~-~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (1426)
||.||+.+..++. ++. +.++..+
T Consensus 217 VlRDG~~v~~~~~~~~~--------------------------------------------~~~~lv~------------ 240 (500)
T COG1129 217 VLRDGRVVGTRPTAAET--------------------------------------------SEDELVR------------ 240 (500)
T ss_pred EEeCCEEeeecccccCC--------------------------------------------CHHHHHH------------
Confidence 9999999887652 211 0000000
Q ss_pred HhhcCCccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccc
Q 000556 476 DELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGG 555 (1426)
Q Consensus 476 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~ 555 (1426)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHHH
Q 000556 556 IYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGR 635 (1426)
Q Consensus 556 ~~~g~lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ 635 (1426)
.|+|
T Consensus 241 ---------------------------------------------------------------------~MvG------- 244 (500)
T COG1129 241 ---------------------------------------------------------------------LMVG------- 244 (500)
T ss_pred ---------------------------------------------------------------------HhhC-------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCCCccchh
Q 000556 636 FFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIG 715 (1426)
Q Consensus 636 ff~~~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g 715 (1426)
.....
T Consensus 245 -----------------------------------------------------------------r~~~~---------- 249 (500)
T COG1129 245 -----------------------------------------------------------------RELED---------- 249 (500)
T ss_pred -----------------------------------------------------------------cchhh----------
Confidence 00000
Q ss_pred HHHhhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCcc
Q 000556 716 VQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDI 795 (1426)
Q Consensus 716 ~~~L~~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (1426)
.| +
T Consensus 250 --------------------------------------~~-------------------------~-------------- 252 (500)
T COG1129 250 --------------------------------------LF-------------------------P-------------- 252 (500)
T ss_pred --------------------------------------hc-------------------------c--------------
Confidence 00 0
Q ss_pred cCCCCCcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEecc
Q 000556 796 SGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGV 875 (1426)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~ 875 (1426)
. . ... ...+..+++++++.. ..++||||++++||++||-|-
T Consensus 253 -------------~-~--~~~------~~~~~~l~v~~l~~~-----------------~~~~dvSf~vr~GEIlGiaGL 293 (500)
T COG1129 253 -------------E-P--PEE------GIGEPVLEVRNLSGG-----------------GKVRDVSFTVRAGEILGIAGL 293 (500)
T ss_pred -------------c-c--ccc------CCCCcEEEEecCCCC-----------------CceeCceeEEeCCcEEEEecc
Confidence 0 0 000 000112445544311 157999999999999999999
Q ss_pred CCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHHHHHHHHHHhcCC-C-C
Q 000556 876 SGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESLLYSAWLRLP-P-E 946 (1426)
Q Consensus 876 sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~lTv~e~l~f~a~lr~~-~-~ 946 (1426)
=|||+|-|+++|.|... ...|+|.+||.+.... ..+.-++||+.+- -+++.++|.+|+.++...+.. . -
T Consensus 294 vGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~ 371 (500)
T COG1129 294 VGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGL 371 (500)
T ss_pred ccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccc
Confidence 99999999999999554 3479999999976543 2345689999874 467889999999887332322 1 2
Q ss_pred CCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHH
Q 000556 947 VDSETRKMFIEEVMELVELKPLI-QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN 1025 (1426)
Q Consensus 947 ~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~ 1025 (1426)
.+....++.+++..+.+++.... +.. +..||||.+|+|.|||.|..+|+||+|||||.|+|.-+..+|.++|++
T Consensus 372 i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~ 446 (500)
T COG1129 372 IDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRE 446 (500)
T ss_pred cChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHH
Confidence 45555566789999999987532 233 468999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 1026 TVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 1026 ~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
++++|++||++|-+.. |+..+||||++|++ |+++-
T Consensus 447 lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~ 481 (500)
T COG1129 447 LAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVG 481 (500)
T ss_pred HHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEE
Confidence 9999999999999985 89999999999986 67764
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=8.2e-52 Score=526.62 Aligned_cols=200 Identities=20% Similarity=0.283 Sum_probs=158.0
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ +++.+|+|+||+|++|++++|+|||||||||||++|+|...+ .+|+|.+++
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p--~~G~I~~~~--- 570 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQP--SSGTVFRSA--- 570 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCceEEECC---
Confidence 488999998873 123599999999999999999999999999999999998653 479998865
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 000556 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqr 986 (1426)
+..+||++|+.. +.+++.++..+......+. .. ++.++++++.+++.+ ..+.. +..||||||
T Consensus 571 -----~~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~~-~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 571 -----KVRMAVFSQHHV--DGLDLSSNPLLYMMRCFPG-VP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred -----ceeEEEEecccc--ccCCcchhHHHHHHHhcCC-CC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 235899999752 3456666543221111111 11 245788999999974 45554 357999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEE-EEcC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YVGP 1065 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v-~~G~ 1065 (1426)
|||+||++|+.+|++|+|||||+|||+.+...+.+.|++. +.|||+++|++. .+...+|++++|++ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888765 349999999986 47788999999986 6777 6675
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 3
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.9e-51 Score=499.21 Aligned_cols=499 Identities=25% Similarity=0.305 Sum_probs=336.7
Q ss_pred ccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCC
Q 000556 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1426)
..+++++|+|+.+.+|+.++|+|+||||||||||+|+|...|+ +|+|...+ .-.++|++|++...+..|
T Consensus 14 g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~t 82 (530)
T COG0488 14 GDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKT 82 (530)
T ss_pred CCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCcc
Confidence 3467999999999999999999999999999999999999998 99998765 236899999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHH---HH-HHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDV---YM-KAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~---~~-~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
|.+.+.-+.. ..++...+..... ...++++... +. .....++.+.+.+++.++..||++.. ++.++
T Consensus 83 v~~~v~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~- 152 (530)
T COG0488 83 VLDYVIEGFG-----ELRELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS- 152 (530)
T ss_pred HHHHHHhhhH-----HHHHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh-
Confidence 9999987643 1122222221111 1122221111 11 11223456677888999999999876 65554
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
.||||||.||+||++|+.+|++|+|||||++||..+..++-+.|+++ .+ ++|.++|++..+-+.|++|+-+
T Consensus 153 ----~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 153 ----SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred ----hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhhheEEe
Confidence 69999999999999999999999999999999999999998888753 34 5555899999999999999999
Q ss_pred cCCeE-EEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHh
Q 000556 399 SDGQI-VYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDE 477 (1426)
Q Consensus 399 ~~G~i-v~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (1426)
+.|++ .|.|.++...+- -.....++ ...++. ...+
T Consensus 224 d~g~l~~y~Gny~~~~~~--------------------r~~~~~~~------------------~~~~~~------~~~~ 259 (530)
T COG0488 224 DRGKLTPYKGNYSSYLEQ--------------------KAERLRQE------------------AAAYEK------QQKE 259 (530)
T ss_pred cCCceeEecCCHHHHHHH--------------------HHHHHHHH------------------HHHHHH------HHHH
Confidence 99987 577877654321 00000000 000000 0000
Q ss_pred hcCCccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccchh
Q 000556 478 LRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIY 557 (1426)
Q Consensus 478 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~ 557 (1426)
.++....+.|... . ....
T Consensus 260 -------------------------------~~~~~~~i~r~~~-----------------------~--~~~~------ 277 (530)
T COG0488 260 -------------------------------LAKEQEWIRRGKA-----------------------A--ASKA------ 277 (530)
T ss_pred -------------------------------HHHHHHHHHHHHh-----------------------c--cchH------
Confidence 0000000000000 0 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHHHHH
Q 000556 558 AGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFF 637 (1426)
Q Consensus 558 ~g~lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff 637 (1426)
|+
T Consensus 278 ------------------------------k~------------------------------------------------ 279 (530)
T COG0488 278 ------------------------------KK------------------------------------------------ 279 (530)
T ss_pred ------------------------------HH------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCCCccchhHH
Q 000556 638 KQYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQ 717 (1426)
Q Consensus 638 ~~~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~ 717 (1426)
++ ....
T Consensus 280 ----------------------------------------------------------a~----------------sr~k 285 (530)
T COG0488 280 ----------------------------------------------------------AK----------------SRIK 285 (530)
T ss_pred ----------------------------------------------------------HH----------------HHHH
Confidence 00 0000
Q ss_pred HhhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCcccC
Q 000556 718 VLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISG 797 (1426)
Q Consensus 718 ~L~~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1426)
.++... . ...-..+. ..... ..
T Consensus 286 ~l~k~~--~-------------------------~~~~~~~~-----------------~~~~~-------------~~- 307 (530)
T COG0488 286 RLEKLE--A-------------------------RLAEERPV-----------------EEGKP-------------LA- 307 (530)
T ss_pred HHHHHH--h-------------------------hhhhcccc-----------------ccccc-------------ce-
Confidence 000000 0 00000000 00000 00
Q ss_pred CCCCcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCC
Q 000556 798 RNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSG 877 (1426)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sG 877 (1426)
. ..+. .. .+..+..+.++|+++.++ +++.+++++||.|.+|+.+||+||||
T Consensus 308 ----~------~f~~--~~-----~~~g~~vl~~~~~~~~y~------------~~~~l~~~~s~~i~~g~riaiiG~NG 358 (530)
T COG0488 308 ----F------RFPP--PG-----KRLGKLVLEFENVSKGYD------------GGRLLLKDLSFRIDRGDRIAIVGPNG 358 (530)
T ss_pred ----e------eccC--Cc-----ccCCCeeEEEeccccccC------------CCceeecCceEEecCCCEEEEECCCC
Confidence 0 0000 00 011124689999998874 23579999999999999999999999
Q ss_pred CchhHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHH
Q 000556 878 AGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFI 956 (1426)
Q Consensus 878 aGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v 956 (1426)
+||||||++|+|...+ .+|.|.+.- .-.+||..|+.. +.+..|+.|.+.-.. + +.. ...+
T Consensus 359 ~GKSTLlk~l~g~~~~--~~G~v~~g~--------~v~igyf~Q~~~~l~~~~t~~d~l~~~~----~-~~~----e~~~ 419 (530)
T COG0488 359 AGKSTLLKLLAGELGP--LSGTVKVGE--------TVKIGYFDQHRDELDPDKTVLEELSEGF----P-DGD----EQEV 419 (530)
T ss_pred CCHHHHHHHHhhhccc--CCceEEeCC--------ceEEEEEEehhhhcCccCcHHHHHHhhC----c-ccc----HHHH
Confidence 9999999999996653 378887742 124799999863 347779999885321 1 111 3457
Q ss_pred HHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEE
Q 000556 957 EEVMELVELKPLI-QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVC 1035 (1426)
Q Consensus 957 ~~~l~~l~L~~~~-~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~ 1035 (1426)
...|..+++..-. .+. ++.||||||.||.+|+.++.+|.+|+|||||++||..+...+.++|.+. ..|||+
T Consensus 420 r~~L~~f~F~~~~~~~~-----v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f---~Gtvl~ 491 (530)
T COG0488 420 RAYLGRFGFTGEDQEKP-----VGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF---EGTVLL 491 (530)
T ss_pred HHHHHHcCCChHHHhCc-----hhhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC---CCeEEE
Confidence 8899999997543 333 4579999999999999999999999999999999999999999999876 579999
Q ss_pred EecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 1036 TIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 1036 ~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
+|||... +-..+++++++.+ +-..|.|.
T Consensus 492 VSHDr~F-l~~va~~i~~~~~-~~~~~~g~ 519 (530)
T COG0488 492 VSHDRYF-LDRVATRIWLVED-KVEEFEGG 519 (530)
T ss_pred EeCCHHH-HHhhcceEEEEcC-ceeEcCCC
Confidence 9999875 7788999999985 44445455
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.9e-49 Score=458.00 Aligned_cols=458 Identities=21% Similarity=0.305 Sum_probs=356.8
Q ss_pred ccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc----ceEEEecCCCCCC
Q 000556 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHDNHI 238 (1426)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1426)
....+++|||++|++||+.+|+|.||+|||||+++|.|.+.|+ +|+|.++|+++.-..|+ .-||.|.||..++
T Consensus 15 ~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv 91 (501)
T COG3845 15 PGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLV 91 (501)
T ss_pred CCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeeccccc
Confidence 3577999999999999999999999999999999999999999 99999999998766664 3589999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+++||.|||..+..-... .+. ...+...+++.+.+..||+--.|.+|++
T Consensus 92 ~~lTV~ENiiLg~e~~~~-~~~------------------------------~~~~~~~~i~~l~~~yGl~vdp~~~V~d 140 (501)
T COG3845 92 PTLTVAENIILGLEPSKG-GLI------------------------------DRRQARARIKELSERYGLPVDPDAKVAD 140 (501)
T ss_pred cccchhhhhhhcCccccc-ccc------------------------------CHHHHHHHHHHHHHHhCCCCCccceeec
Confidence 999999999988643210 000 0012334577889999999988888875
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
||=||||||.|-++|+.+|++|+|||||+-|-|..+.++++.|+++++ . +.+||.++|-..|+.+.+|++.||
T Consensus 141 -----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~-~-G~tIi~ITHKL~Ev~~iaDrvTVL 213 (501)
T COG3845 141 -----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA-E-GKTIIFITHKLKEVMAIADRVTVL 213 (501)
T ss_pred -----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhhCeeEEE
Confidence 999999999999999999999999999999999999999999999875 3 555666899999999999999999
Q ss_pred cCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhcccCCCCccCCHHHHHHHHHhcccchhhHHhh
Q 000556 399 SDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDEL 478 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 478 (1426)
..|+++-.-++. ++ .+.+++++.
T Consensus 214 R~Gkvvgt~~~~----------------~~---------------------------~t~~ela~l-------------- 236 (501)
T COG3845 214 RRGKVVGTVDPV----------------AE---------------------------TTEEELAEL-------------- 236 (501)
T ss_pred eCCeEEeeecCC----------------CC---------------------------CCHHHHHHH--------------
Confidence 999986432210 00 011111000
Q ss_pred cCCccccccccccccCccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccchhH
Q 000556 479 RTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYA 558 (1426)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gt~f~~~~~~~~~~~~~~~~~ 558 (1426)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhhhhhccCCCCChhhHHHHHHHHHhhHHHHHHHHHhhhheeccccCCCHHHHHH
Q 000556 559 GALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFK 638 (1426)
Q Consensus 559 g~lf~~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~ 638 (1426)
|+|
T Consensus 237 -------------------------------------------------------------------MvG---------- 239 (501)
T COG3845 237 -------------------------------------------------------------------MVG---------- 239 (501)
T ss_pred -------------------------------------------------------------------hcC----------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhcccccccccchhhhhhcHHHHHHHHHHHHHhcCCcccccCCCCccchhHHH
Q 000556 639 QYLLFLAVNQMASALFRLIAATGRSMVVANTFEDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQV 718 (1426)
Q Consensus 639 ~~l~~~l~~~~~~~l~~~iaa~~~s~~~a~~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~ 718 (1426)
.++
T Consensus 240 -----------------------------------------------------------------------------~~v 242 (501)
T COG3845 240 -----------------------------------------------------------------------------REV 242 (501)
T ss_pred -----------------------------------------------------------------------------Ccc
Confidence 000
Q ss_pred hhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeeccccccccccccccccccccCCCCCCcccCC
Q 000556 719 LKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGR 798 (1426)
Q Consensus 719 L~~~~~~~~~~~~w~~~g~l~~~~v~f~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1426)
. .. ..
T Consensus 243 ~------------------------------------------------------------~~-------------~~-- 247 (501)
T COG3845 243 V------------------------------------------------------------LR-------------VV-- 247 (501)
T ss_pred c------------------------------------------------------------cc-------------cc--
Confidence 0 00 00
Q ss_pred CCCcchhhhhcccCCCCCCCCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCC
Q 000556 799 NSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGA 878 (1426)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGa 878 (1426)
..+...+ +..+.++|++..-+. ....+++|||++++||++||.|..|-
T Consensus 248 --------------~~~~~pg------~~vL~V~~L~v~~~~------------~~~~v~~vs~~Vr~GEIvGIAGV~GN 295 (501)
T COG3845 248 --------------KPPSTPG------EVVLEVEDLSVKDRR------------GVTAVKDVSFEVRAGEIVGIAGVAGN 295 (501)
T ss_pred --------------cCCCCCC------CeEEEEeeeEeecCC------------CCceeeeeeeEEecCcEEEEEecCCC
Confidence 0000000 124777777755332 13579999999999999999999999
Q ss_pred chhHHHhhhcCCCCCceEEEEEEEcCccC-C---cc-cccceEEEeccCCC---CCCCCCHHHHHHHHHHhcC----CCC
Q 000556 879 GKTTLMDVLSGRKTGGYITGNITISGYPK-K---QE-TFARISGYCEQNDI---HSPFVTVYESLLYSAWLRL----PPE 946 (1426)
Q Consensus 879 GKTTLl~~L~g~~~~~~~~G~i~i~g~~~-~---~~-~~~~~~gyv~q~~~---~~~~lTv~e~l~f~a~lr~----~~~ 946 (1426)
|-+.|+++|+|..+. .+|+|.++|.+. . .. ..+.-++|||++.. +.+.+|+.||+.+...-+- ..-
T Consensus 296 GQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~ 373 (501)
T COG3845 296 GQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGF 373 (501)
T ss_pred CHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccc
Confidence 999999999997653 349999999986 2 21 23346899999864 3578999999987643221 112
Q ss_pred CCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHH
Q 000556 947 VDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNT 1026 (1426)
Q Consensus 947 ~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~ 1026 (1426)
.+....+++..++++.++........ ..+.||||++||+-+||+|..+|++|+..+||.|||..+.+.|.+.|.+.
T Consensus 374 l~~~~i~~~a~~li~~fdVr~~~~~~----~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~ 449 (501)
T COG3845 374 LDRRAIRKFARELIEEFDVRAPSPDA----PARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLEL 449 (501)
T ss_pred cCHHHHHHHHHHHHHHcCccCCCCCc----chhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHH
Confidence 45566777889999999987332211 24689999999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCC
Q 000556 1027 VDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1426)
Q Consensus 1027 ~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~ 1067 (1426)
++.|+.|++++-+.. |+++++|+|.+|.+ |+++...+..
T Consensus 450 r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~ 488 (501)
T COG3845 450 RDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPE 488 (501)
T ss_pred HhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceecccccc
Confidence 999999999999997 89999999999985 7888777654
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-43 Score=363.75 Aligned_cols=214 Identities=26% Similarity=0.381 Sum_probs=188.8
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|++.++ +...+|+|||++|++||+++|+|||||||||||++|.+... +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 6677887666 45789999999999999999999999999999999999766 45899999997543
Q ss_pred c----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 909 Q----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 909 ~----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
. ...|+.+|+|+|+..+||.+||.||+.++-..- ...++++.++...+.|+.+||.+.+|..+ ..||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcH
Confidence 2 346788999999999999999999998864322 23456777788899999999999999884 589999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
|||||+|||||+.+|+++++|||||+|||+...++.+.+++++++|.|.||+||.... .-+.+|||+.|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999875 6688999999985 7899888
Q ss_pred CC
Q 000556 1065 PL 1066 (1426)
Q Consensus 1065 ~~ 1066 (1426)
+.
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 75
No 46
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=5.6e-42 Score=396.12 Aligned_cols=202 Identities=20% Similarity=0.273 Sum_probs=156.0
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..+.++|+++.++. +..++++++|-+.+++.+|++||||+||||||+++.|...+ ..|.|.-.-+.
T Consensus 388 pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H~ 453 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSHN 453 (614)
T ss_pred CeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--ccccccccccc
Confidence 35889999988752 22589999999999999999999999999999999997663 46766433221
Q ss_pred CCcccccceEEEeccC--CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 907 KKQETFARISGYCEQN--DIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 907 ~~~~~~~~~~gyv~q~--~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
..++..|. +.+.-..++-|++.=. .+ ++.+.+.+..++..+||....+... .+.||+|
T Consensus 454 --------~~~~y~Qh~~e~ldl~~s~le~~~~~----~~----~~~~~e~~r~ilgrfgLtgd~q~~p----~~~LS~G 513 (614)
T KOG0927|consen 454 --------KLPRYNQHLAEQLDLDKSSLEFMMPK----FP----DEKELEEMRSILGRFGLTGDAQVVP----MSQLSDG 513 (614)
T ss_pred --------cchhhhhhhHhhcCcchhHHHHHHHh----cc----ccchHHHHHHHHHHhCCCccccccc----hhhcccc
Confidence 12233332 2222345666665321 11 1234556888999999995544432 5789999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
||+||.+|+.++..|.||+|||||+|||..+...+.++|.+. ..+||.++|+... |-+.++++.+..+++...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999888765 5689999999874 778999999999988889988
Q ss_pred CC
Q 000556 1065 PL 1066 (1426)
Q Consensus 1065 ~~ 1066 (1426)
..
T Consensus 590 ~i 591 (614)
T KOG0927|consen 590 DI 591 (614)
T ss_pred cH
Confidence 74
No 47
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-42 Score=360.41 Aligned_cols=222 Identities=25% Similarity=0.402 Sum_probs=188.3
Q ss_pred cccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC----CccceEEEecCCCCC
Q 000556 162 KKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF----VPERTAAYISQHDNH 237 (1426)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv~Q~d~~ 237 (1426)
..+..+|+|||++|++||.++|+|||||||||||++|.|+..++ +|+|.++|.++... ..++.+|+|+|+..+
T Consensus 12 fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnL 88 (240)
T COG1126 12 FGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNL 88 (240)
T ss_pred eCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccc
Confidence 34678999999999999999999999999999999999999998 99999999765421 235789999999999
Q ss_pred CCCCCHHHHHHHhhhh-cCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 000556 238 IGEMTVRETLAFSARC-QGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1426)
||.+||.||+..+... ++. ...+++..+..+|+.+||.+.+|.+
T Consensus 89 FPHlTvleNv~lap~~v~~~----------------------------------~k~eA~~~A~~lL~~VGL~~ka~~y- 133 (240)
T COG1126 89 FPHLTVLENVTLAPVKVKKL----------------------------------SKAEAREKALELLEKVGLADKADAY- 133 (240)
T ss_pred cccchHHHHHHhhhHHHcCC----------------------------------CHHHHHHHHHHHHHHcCchhhhhhC-
Confidence 9999999999987431 111 1123455677899999999999855
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
+.+|||||||||+|||||+-+|+++++|||||+|||....++.+.++++++ .+ .+.+.++|....+.+.+|||+
T Consensus 134 ----P~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~-eG-mTMivVTHEM~FAr~Vadrvi 207 (240)
T COG1126 134 ----PAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EG-MTMIIVTHEMGFAREVADRVI 207 (240)
T ss_pred ----ccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH-cC-CeEEEEechhHHHHHhhheEE
Confidence 457999999999999999999999999999999999999999999999986 34 444558899999999999999
Q ss_pred EecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHh
Q 000556 397 LLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQE 435 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~ 435 (1426)
.|++|+++.+|+++++ |..|.+....+|+..
T Consensus 208 Fmd~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 208 FMDQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred EeeCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 9999999999999876 345666556666643
No 48
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.1e-41 Score=389.13 Aligned_cols=214 Identities=29% Similarity=0.436 Sum_probs=189.6
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|++..+. .++.+|+||||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 5 i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~~ 70 (293)
T COG1131 5 IEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDVV 70 (293)
T ss_pred eeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeCc
Confidence 56677776652 136799999999999999999999999999999999998774 5899999998765
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 909 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 909 ~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
. ...++.+||++|++.+++.+||+|+|.|.+.++.+.. +..+++++++++.++|.+..++. +++||+|||
T Consensus 71 ~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~k 142 (293)
T COG1131 71 KEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMK 142 (293)
T ss_pred cCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHH
Confidence 4 3567789999999999999999999999999986543 44566799999999999866555 468999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
|||+||+||+++|++|||||||+|||+.++..+++.|++++++| +||+++||+++ ++.+.||+|++|++ |++++.|+
T Consensus 143 qrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~ 220 (293)
T COG1131 143 QRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGT 220 (293)
T ss_pred HHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 99999999999999999999999999999999999999999887 89999999997 68888999999985 89999997
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 221 ~ 221 (293)
T COG1131 221 P 221 (293)
T ss_pred H
Confidence 5
No 49
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-41 Score=366.65 Aligned_cols=216 Identities=26% Similarity=0.429 Sum_probs=185.0
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.++++|+++.|+. + ++|+|||+++++|++++|+||||||||||+|+|.|... +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~~------------~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYGN------------R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEECC------------E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 5889999998851 2 59999999999999999999999999999999999766 3589999999887
Q ss_pred CcccccceEEEeccCCC---CCCCCCHHHHHHHHHHhcCC--CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 908 KQETFARISGYCEQNDI---HSPFVTVYESLLYSAWLRLP--PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~~---~~~~lTv~e~l~f~a~lr~~--~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
.+..-+..+|||||... -+| +||+|-+..+..-+.. .... +..++.++++|+.+|+.+++|+.+| .||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP-~tV~d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LS 141 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFP-ITVKDVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQIG-----ELS 141 (254)
T ss_pred cccccCCeEEEcCcccccCCCCC-cCHHHHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCccc-----ccC
Confidence 65444568999999653 234 7999999876433221 1122 2335679999999999999999976 699
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
|||+|||.|||||+.+|++|+|||||+|+|+.++..++++|++++++|+||++++||++ .+.+.||+|+.|+ +++++
T Consensus 142 GGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~ 218 (254)
T COG1121 142 GGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIA 218 (254)
T ss_pred cHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEe
Confidence 99999999999999999999999999999999999999999999988999999999998 5899999999997 58999
Q ss_pred EcCCCc
Q 000556 1063 VGPLGR 1068 (1426)
Q Consensus 1063 ~G~~~~ 1068 (1426)
.|+..+
T Consensus 219 ~G~~~~ 224 (254)
T COG1121 219 SGPPEE 224 (254)
T ss_pred ccChhh
Confidence 999853
No 50
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-41 Score=366.59 Aligned_cols=218 Identities=23% Similarity=0.316 Sum_probs=191.3
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.+++|+..+... ..+...+|+|||++|++||+.||+|+||||||||++++.+... +.+|+|.+||.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 5678887555421 1124579999999999999999999999999999999999766 45899999997654
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 909 Q------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 909 ~------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
. ...|+.+|+++|+..++...||+||+.|...+.. .++++++++|.++++.+||.+.++.. +.+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcC
Confidence 3 2357889999999999999999999999877653 56888999999999999999998887 46899
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v 1061 (1426)
|||||||+|||||+.+|+||++|||||+|||.+...|.+.|+++.++ |.||++++|++. -+-+.|||+.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999765 999999999986 47789999999985 8999
Q ss_pred EEcCC
Q 000556 1062 YVGPL 1066 (1426)
Q Consensus 1062 ~~G~~ 1066 (1426)
..|+.
T Consensus 222 E~G~v 226 (339)
T COG1135 222 EEGTV 226 (339)
T ss_pred EeccH
Confidence 99986
No 51
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-40 Score=358.37 Aligned_cols=204 Identities=25% Similarity=0.363 Sum_probs=181.2
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++++++.+. ...+|+|||++|.+||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCccc
Confidence 467788887764 35799999999999999999999999999999999998774 589999999887
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000556 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 987 (1426)
.. ....+|||+|++.++|..||+||+.|+...+. .+++++.++++++++.+||.+..|.. +..|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 32 34568999999999999999999999876653 34566677899999999999999987 4689999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 988 Rl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
||+|||||+.+|+||+||||.+.||+.|+..+++.|.++.+ .++||+++||+.. |...+.|||++|..+
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999875 4899999999997 678899999999864
No 52
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.7e-40 Score=351.79 Aligned_cols=230 Identities=26% Similarity=0.371 Sum_probs=198.6
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+++++|+.+. +.+.+++|||++|++||+++||||||+||||||++|.|...+ .+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcch
Confidence 58889988765 457899999999999999999999999999999999998874 489999999986
Q ss_pred Ccc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCC
Q 000556 908 KQE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGVSG 980 (1426)
Q Consensus 908 ~~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~ 980 (1426)
.+. ..++.+|+++|.-.+|..+||+||+.|.. |.....+++..++.+..-|+.+||... .+.. +.+
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 542 34677999999999999999999999853 334456777778888889999999987 5555 468
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 981 LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
||||++||++|||||+.+|+|||+||||+||||.++..+-++|+++.+. |.|++++|||.. +++..+|++++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999877 999999999997 69999999999996 79
Q ss_pred EEEEcCCCcc----hhHHHHHHHhCC
Q 000556 1060 EIYVGPLGRH----SCQLISYFEAIP 1081 (1426)
Q Consensus 1060 ~v~~G~~~~~----~~~~~~yf~~~~ 1081 (1426)
++..|+.++- -.-+.+||....
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~ 249 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIR 249 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCC
Confidence 9999997421 124556776543
No 53
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-40 Score=363.89 Aligned_cols=224 Identities=27% Similarity=0.354 Sum_probs=194.2
Q ss_pred ccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCC
Q 000556 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDN 236 (1426)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1426)
....+|+|||++|++|++.+|+|+||||||||++++.++-.|+ +|+|.++|.++..+.. ++.+|+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 4567999999999999999999999999999999999999998 9999999988876543 478999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1426)
++...||.||++|..+..+.. ..+.+.++.++|+.+||++.+|.+
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~~y- 138 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKADRY- 138 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhccC-
Confidence 999999999999998876532 123456788999999999988754
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
+.+|||||||||+|||||+.+|+||+.|||||+|||.|+..|++.|+++.++. +.+|+.++|-++-+-+.||+|.
T Consensus 139 ----P~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 139 ----PAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred ----chhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhhe
Confidence 55899999999999999999999999999999999999999999999987765 5556668888999999999999
Q ss_pred EecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhc
Q 000556 397 LLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVT 437 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~ 437 (1426)
+|++|+++++|+..++. .-|.+.-...|+.+..
T Consensus 214 vm~~G~lvE~G~v~~vF--------~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEVF--------ANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHhh--------cCcchHHHHHHHHhhc
Confidence 99999999999999873 4465555556665443
No 54
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.9e-40 Score=365.80 Aligned_cols=217 Identities=28% Similarity=0.397 Sum_probs=187.9
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++.+|+++.|+ ++.+|+|+||++++||+++|+|||||||||||++|+|..++ .+|+|.++|.++.
T Consensus 3 L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p--~~G~V~l~g~~i~ 67 (258)
T COG1120 3 LEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKP--KSGEVLLDGKDIA 67 (258)
T ss_pred eEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCCchh
Confidence 67889998884 46799999999999999999999999999999999997763 4799999999865
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 909 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEV-DSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 909 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~-~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
+ ..+++.++||||.......+||+|.+.++..-+...-. ..++..+.++++|+.+|+.+.+++.+ ..||||
T Consensus 68 ~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSGG 142 (258)
T COG1120 68 SLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSGG 142 (258)
T ss_pred hcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccChh
Confidence 4 45678899999999888899999999887432221111 12233346999999999999999884 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEE
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~ 1063 (1426)
||||+.|||||+.+|+||+||||||.||...+.+++++++++++ +|+|||+++||++. ....||++++|++ |+++..
T Consensus 143 erQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a~ 220 (258)
T COG1120 143 ERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVAQ 220 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEee
Confidence 99999999999999999999999999999999999999999985 49999999999984 7899999999985 899999
Q ss_pred cCCC
Q 000556 1064 GPLG 1067 (1426)
Q Consensus 1064 G~~~ 1067 (1426)
|+..
T Consensus 221 G~p~ 224 (258)
T COG1120 221 GTPE 224 (258)
T ss_pred cCcc
Confidence 9864
No 55
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.6e-40 Score=354.15 Aligned_cols=193 Identities=29% Similarity=0.429 Sum_probs=168.3
Q ss_pred eEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcc------c-ccceEEEeccCCCCC
Q 000556 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE------T-FARISGYCEQNDIHS 926 (1426)
Q Consensus 854 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~-~~~~~gyv~q~~~~~ 926 (1426)
..+|++||++|++||++||||||||||||||++|.|...+ .+|.|.++|.+.... . .++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999998774 589999999765431 2 345799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc-ccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEe
Q 000556 927 PFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQ-SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1005 (1426)
Q Consensus 927 ~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLD 1005 (1426)
|.+||.||+.+...+... ....+++.++++++.+||.+..+ .. +..|||||||||+|||||+++|+||+.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 999999999986655422 22255667899999999997666 54 4589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 1006 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 1006 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
|||.+||+.++..|++++++++++ |+|||++||+| ++...+||++.|++|+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999999866 99999999997 5789999999999754
No 56
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-40 Score=342.39 Aligned_cols=200 Identities=28% Similarity=0.387 Sum_probs=184.0
Q ss_pred EEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCCCHH
Q 000556 855 VLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVTVY 932 (1426)
Q Consensus 855 ~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~lTv~ 932 (1426)
++++||||+++.||++||+|+|||||||+|++|++...+ .+|.|++||.+... ...++.+|.++.+..++..+|++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 489999999999999999999999999999999998774 48999999998644 34678899999888899999999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCC
Q 000556 933 ESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1012 (1426)
Q Consensus 933 e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD 1012 (1426)
|||.|.+++. +....+.+.+++++.+.++|.++.|+.+| ++|.|+||||.|||||+++|++++|||||||||
T Consensus 94 Enl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 9999999886 45566778889999999999999999976 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1013 ARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1013 ~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
..+...+.+.++++.++|++||+++|... |+..+||+++++++ |++++.|..
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~ 217 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSI 217 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCH
Confidence 99999999999999988999999999986 78889999999996 799999986
No 57
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-40 Score=377.48 Aligned_cols=217 Identities=31% Similarity=0.432 Sum_probs=194.1
Q ss_pred EeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc-ceEEEecCCCCCCCCCCHHH
Q 000556 167 ILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE-RTAAYISQHDNHIGEMTVRE 245 (1426)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 245 (1426)
+|+|+|+.|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..|+ |.+|+|+|+..++|.|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999998 99999999999998875 78999999999999999999
Q ss_pred HHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCC
Q 000556 246 TLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGIS 325 (1426)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LS 325 (1426)
|+.|+.+.++... .+.+.+++++.+.|+|++..|.. +++||
T Consensus 95 Niaf~Lk~~~~~k----------------------------------~ei~~rV~eva~~L~l~~lL~r~-----P~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVPK----------------------------------AEIDKRVKEVAKLLGLEHLLNRK-----PLQLS 135 (338)
T ss_pred HhhhhhhhCCCch----------------------------------HHHHHHHHHHHHHcCChhHHhcC-----cccCC
Confidence 9999998775321 23456788899999999988854 45799
Q ss_pred hhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEE
Q 000556 326 GGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1426)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~ 405 (1426)
|||||||++||||+.+|++++||||+|.||...+.++...|+++.+. -++++|.++|+..|+..++|+|.+|++|+|..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~-l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHER-LGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHh-cCCcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999999999999987554 45666668999999999999999999999999
Q ss_pred ecChhhHHHHHHhcCCCCCCCCChhHHHH
Q 000556 406 QGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1426)
Q Consensus 406 ~G~~~~~~~~F~~~Gf~cp~~~~~adfl~ 434 (1426)
.|++.++. ..|.+.-+|.|+-
T Consensus 215 ~g~p~ely--------~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLELY--------ERPANLFVAGFIG 235 (338)
T ss_pred cCChHHHh--------hCccchhhhhhcC
Confidence 99999984 4577777777753
No 58
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-40 Score=349.14 Aligned_cols=211 Identities=26% Similarity=0.392 Sum_probs=186.5
Q ss_pred ccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCC
Q 000556 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIG 239 (1426)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 239 (1426)
.++.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||.++.+... ++.+|||-|+-.+||
T Consensus 12 ~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFP 88 (309)
T COG1125 12 GNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFP 88 (309)
T ss_pred CCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCC
Confidence 4577999999999999999999999999999999999999998 9999999999887654 689999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000556 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1426)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1426)
++||.||+.+--.+.+... ++.+.+++++|+.+||+.. ...++
T Consensus 89 h~Tv~eNIa~VP~L~~w~k----------------------------------~~i~~r~~ELl~lvgL~p~---~~~~R 131 (309)
T COG1125 89 HLTVAENIATVPKLLGWDK----------------------------------ERIKKRADELLDLVGLDPS---EYADR 131 (309)
T ss_pred CccHHHHHHhhhhhcCCCH----------------------------------HHHHHHHHHHHHHhCCCHH---HHhhc
Confidence 9999999998766655321 2245578999999999852 12356
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
.+++|||||+|||.+||||+.+|++++||||+++|||-++.++.+.++++-+.. +++||.++|+..|++.++|+|++|+
T Consensus 132 yP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l-~kTivfVTHDidEA~kLadri~vm~ 210 (309)
T COG1125 132 YPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKEL-GKTIVFVTHDIDEALKLADRIAVMD 210 (309)
T ss_pred CchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHhhhceEEEec
Confidence 788999999999999999999999999999999999999999999998886655 4556668999999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 000556 400 DGQIVYQGPRELVLE 414 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1426)
+|+++..+++++++.
T Consensus 211 ~G~i~Q~~~P~~il~ 225 (309)
T COG1125 211 AGEIVQYDTPDEILA 225 (309)
T ss_pred CCeEEEeCCHHHHHh
Confidence 999999999999874
No 59
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-40 Score=349.90 Aligned_cols=213 Identities=25% Similarity=0.361 Sum_probs=189.8
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++|+||+..+. ++.+++|+|++|++||++.++|||||||||+|++|.+...+ .+|+|.+||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiep--t~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEP--TSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCC--CCceEEECCeecc
Confidence 57888876653 45799999999999999999999999999999999998774 5899999999876
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCH
Q 000556 909 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP--LIQSLVGLPGVSGLST 983 (1426)
Q Consensus 909 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~LSg 983 (1426)
. ...||.+|||-|+-.+||++||.||+.+--.+. .-++++.+++++|+|+.+||++ +.++. +..|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 5 357889999999999999999999998765543 4567888899999999999985 66766 478999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
||+|||.+||||+++|+||+||||.++|||.++..+++.++++.++ |+|||++|||.. |.+++.|||.+|+ +|+++-
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEE
Confidence 9999999999999999999999999999999999999999999766 999999999997 7899999999998 478888
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
++.+
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 8875
No 60
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-40 Score=357.73 Aligned_cols=223 Identities=29% Similarity=0.454 Sum_probs=189.2
Q ss_pred ccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCc---cCCCCCc-cceEEEecCCCCCC
Q 000556 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGH---DMGEFVP-ERTAAYISQHDNHI 238 (1426)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~---~~~~~~~-~~~~~yv~Q~d~~~ 238 (1426)
....+++|||+.|+.||+++++|||||||||||++|+|+..|+ +|.|.+||+ +.+.... .|.+|||+|+..+|
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF 89 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALF 89 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhc
Confidence 3466899999999999999999999999999999999999998 999999999 5555333 47899999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+.|||.+||+|+.+++.. .|+ ..+.+.+++++|+.+.|++.++
T Consensus 90 ~HmtVa~NIAFGl~~~~~-------------------~p~-------------~~~~r~rv~elL~lvqL~~la~----- 132 (345)
T COG1118 90 PHMTVADNIAFGLKVRKE-------------------RPS-------------EAEIRARVEELLRLVQLEGLAD----- 132 (345)
T ss_pred ccchHHhhhhhccccccc-------------------CCC-------------hhhHHHHHHHHHHHhcccchhh-----
Confidence 999999999999876521 010 1124456788899999988766
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
+++.+|||||||||++||||+..|++|+||||+++||...+..+-+.|+++.... +.+.+.++|+.+|+++++|+|++|
T Consensus 133 ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~-~~ttvfVTHD~eea~~ladrvvvl 211 (345)
T COG1118 133 RYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRL-GVTTVFVTHDQEEALELADRVVVL 211 (345)
T ss_pred cCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhh-CceEEEEeCCHHHHHhhcceEEEe
Confidence 5667899999999999999999999999999999999999999999999986544 455555899999999999999999
Q ss_pred cCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHH
Q 000556 399 SDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~ 434 (1426)
++|+|...||++++.+ -|...-+..|+-
T Consensus 212 ~~G~Ieqvg~p~ev~~--------~P~s~fV~~f~G 239 (345)
T COG1118 212 NQGRIEQVGPPDEVYD--------HPASRFVARFLG 239 (345)
T ss_pred cCCeeeeeCCHHHHhc--------CCCccceecccc
Confidence 9999999999999853 455555555543
No 61
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-40 Score=378.01 Aligned_cols=223 Identities=31% Similarity=0.430 Sum_probs=198.1
Q ss_pred cceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc-ceEEEecCCCCCCCCCC
Q 000556 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE-RTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lT 242 (1426)
+..+|+|+|+.|++||+++|+|||||||||||++|||...|+ +|+|.++|+++....++ |.+++|+|+..+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 567999999999999999999999999999999999999998 99999999999988774 78999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
|+||+.|+.+.++... ..+.+.+++++|+.++|++.++ +.+.
T Consensus 94 V~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~-----R~p~ 135 (352)
T COG3842 94 VEENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFAD-----RKPH 135 (352)
T ss_pred HHHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhh-----hChh
Confidence 9999999987443111 1124457889999999998776 4456
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
+|||||||||+|||||+.+|++|+||||.|+||..-+.++...|+++.+.. +.+.|.++|+..|...+.|+|++|++|+
T Consensus 136 qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 136 QLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred hhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCc
Confidence 899999999999999999999999999999999999999999999987765 6666668999999999999999999999
Q ss_pred EEEecChhhHHHHHHhcCCCCCCCCChhHHHHhh
Q 000556 403 IVYQGPRELVLEFFESMGFKCPKRKGVADFLQEV 436 (1426)
Q Consensus 403 iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v 436 (1426)
|...|+++++ |..|...-+|+|+-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 4568888888888654
No 62
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-40 Score=346.24 Aligned_cols=220 Identities=26% Similarity=0.329 Sum_probs=187.1
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.++++|++-.|+ +++++|+|||+.|++||++||+|+|||||||||++|.|... +.+|+|.++|.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 478888887764 35689999999999999999999999999999999999765 4589999999764
Q ss_pred Cc------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000556 908 KQ------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-----PEVDSETRKMFIEEVMELVELKPLIQSLVGLP 976 (1426)
Q Consensus 908 ~~------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 976 (1426)
.. ..+++.+||++|+..+.+.++|.+|+..+..-+.+ -....++.+..+-++|+.+|+.+.+.+..
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 43 23577899999999999999999999876432211 12233344456778999999999888874
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
..|||||+|||+|||||+.+|+||+-|||+++||+.++..||+.|++++++ |.|||++.||... ..++|||++-|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 479999999999999999999999999999999999999999999999765 9999999999864 568999999998
Q ss_pred cCcEEEEEcCCCc
Q 000556 1056 RGGQEIYVGPLGR 1068 (1426)
Q Consensus 1056 ~gg~~v~~G~~~~ 1068 (1426)
+ |+++|.||..+
T Consensus 223 ~-G~ivfDg~~~e 234 (258)
T COG3638 223 A-GRIVFDGPASE 234 (258)
T ss_pred C-CcEEEeCChhh
Confidence 5 89999999854
No 63
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.4e-39 Score=373.48 Aligned_cols=212 Identities=33% Similarity=0.469 Sum_probs=184.5
Q ss_pred cceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC--CccceEEEecCCCCCCCCC
Q 000556 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF--VPERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 241 (1426)
++.+|+|||+.|++|++++|+||||||||||||+|+|.+.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 478999999999999999999999999999999999999997 99999999887653 2357899999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
||+|||.|.+.+.+.... ....+++++++.+||++.+++ .+
T Consensus 94 T~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~~~-----~~ 134 (293)
T COG1131 94 TVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKANK-----KV 134 (293)
T ss_pred cHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhhCc-----ch
Confidence 999999999988754210 122457889999999984443 45
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
++||+|||||++||.||+++|+++||||||+|||+.++.++.+.|+++++. ++++|+..+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 679999999999999999999999999999999999999999999999864 4355555778889999999999999999
Q ss_pred eEEEecChhhHHHHHHh
Q 000556 402 QIVYQGPRELVLEFFES 418 (1426)
Q Consensus 402 ~iv~~G~~~~~~~~F~~ 418 (1426)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999988765543
No 64
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-39 Score=343.99 Aligned_cols=211 Identities=25% Similarity=0.358 Sum_probs=180.7
Q ss_pred ccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCC
Q 000556 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDN 236 (1426)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1426)
.++.|++|||+.|++||+++|+|||||||||||++|.|+++|+ +|+|.++|.++..... ++.+|+++|+-.
T Consensus 19 G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gA 95 (263)
T COG1127 19 GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGA 95 (263)
T ss_pred CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccc
Confidence 4577999999999999999999999999999999999999998 9999999999876543 367999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1426)
+|..+||+||+.|..+-... +|. ...+..+..-|+..||... +
T Consensus 96 LFssltV~eNVafplre~~~-------------------lp~--------------~~i~~lv~~KL~~VGL~~~----~ 138 (263)
T COG1127 96 LFSSLTVFENVAFPLREHTK-------------------LPE--------------SLIRELVLMKLELVGLRGA----A 138 (263)
T ss_pred cccccchhHhhheehHhhcc-------------------CCH--------------HHHHHHHHHHHHhcCCChh----h
Confidence 99999999999997653211 110 1122334555788899854 2
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
.+.++.+||||+|||+++|||++.+|+++|+||||+||||.++..+.+.++++.+..+ .+++.++|+.++++..+|+|+
T Consensus 139 ~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg-~T~i~VTHDl~s~~~i~Drv~ 217 (263)
T COG1127 139 ADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALG-LTVIMVTHDLDSLLTIADRVA 217 (263)
T ss_pred hhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhC-CEEEEEECChHHHHhhhceEE
Confidence 3567789999999999999999999999999999999999999999999999887655 445558999999999999999
Q ss_pred EecCCeEEEecChhhHHH
Q 000556 397 LLSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1426)
+|.+|+|+.+|+++++.+
T Consensus 218 ~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 218 VLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEeCCEEEEeCCHHHHHh
Confidence 999999999999999864
No 65
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7.7e-40 Score=360.91 Aligned_cols=210 Identities=34% Similarity=0.469 Sum_probs=181.4
Q ss_pred cceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc---ceEEEecCCCCCCCC
Q 000556 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE---RTAAYISQHDNHIGE 240 (1426)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~ 240 (1426)
+++||+|+|+.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.++..+ |.++||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 467999999999999999999999999999999999999998 99999999998877653 789999999888889
Q ss_pred CCHHHHHHHhhhh-cCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000556 241 MTVRETLAFSARC-QGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1426)
Q Consensus 241 lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1426)
+||+|-+.++..- ++. .+. ...+....++..|+.+|+.+.++..+.
T Consensus 91 ~tV~d~V~~GR~p~~~~-------------------~~~------------~~~~D~~~v~~aL~~~~~~~la~r~~~-- 137 (258)
T COG1120 91 LTVYELVLLGRYPHLGL-------------------FGR------------PSKEDEEIVEEALELLGLEHLADRPVD-- 137 (258)
T ss_pred cEEeehHhhcCCccccc-------------------ccC------------CCHhHHHHHHHHHHHhCcHHHhcCccc--
Confidence 9999999987431 110 000 011123367888999999999987664
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
.|||||||||.||+||+++|++|+||||||+||...+.++++.++++++.. +.+||.++|+.+.+..+||++++|+
T Consensus 138 ---~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~-~~tvv~vlHDlN~A~ryad~~i~lk 213 (258)
T COG1120 138 ---ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREK-GLTVVMVLHDLNLAARYADHLILLK 213 (258)
T ss_pred ---ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 699999999999999999999999999999999999999999999998754 4555557889999999999999999
Q ss_pred CCeEEEecChhhHH
Q 000556 400 DGQIVYQGPRELVL 413 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1426)
+|+++.+|++++++
T Consensus 214 ~G~i~a~G~p~evl 227 (258)
T COG1120 214 DGKIVAQGTPEEVL 227 (258)
T ss_pred CCeEEeecCcchhc
Confidence 99999999998775
No 66
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=5.4e-35 Score=395.19 Aligned_cols=216 Identities=23% Similarity=0.347 Sum_probs=187.3
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++++|++..++. +++.+|+|||+.+++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~P--tsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPP--TSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCC--CceEEEECCEE
Confidence 46889999887731 235699999999999999999999999999999999998763 48999999988
Q ss_pred CCcc--cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 907 KKQE--TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 907 ~~~~--~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
+... ..++.+|||+|++.+++.+||+|++.|.++++. ...++.+++++++++.+||.+..++.+ +.||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 6532 345679999999999999999999999876653 223344567899999999998888874 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
|||||+||+||+.+|+||+|||||+|||+.+++.+++.|++++ +|+|||+++|++. ++...+||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 5999999999986 57788999999986 7899888
Q ss_pred CC
Q 000556 1065 PL 1066 (1426)
Q Consensus 1065 ~~ 1066 (1426)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 74
No 67
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-39 Score=347.25 Aligned_cols=192 Identities=26% Similarity=0.374 Sum_probs=170.2
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1426)
..+|+|+|++|.+||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++ ..+...++||+|++.++|-+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v--~~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPV--TGPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccc--CCCCCCEEEEeccCcccchhhHH
Confidence 67999999999999999999999999999999999999998 99999999987 34567899999999999999999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 000556 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1426)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1426)
||+.|+.+..+... .+...+++..|+.+||.+..|. .+++|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~~-----~P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFEDK-----YPHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhhc-----Ccccc
Confidence 99999987664211 1123367889999999988874 56689
Q ss_pred ChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+.. +.+|+.++|+.+|+..++|+|++|+++
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~-~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEET-RKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 9999999999999999999999999999999999999999998887754 455666899999999999999999984
No 68
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.4e-39 Score=328.91 Aligned_cols=212 Identities=25% Similarity=0.330 Sum_probs=183.3
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.|+||+-.|.. ...+|+||||.|++||++-|+|||||||||||++|.+... +..|+|.++|+++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 578888766643 3569999999999999999999999999999999999765 35899999999865
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
.. ..+|.+|+|+|+..+.+..||+||+.|...... .+..+.+++|.++|+.+||.+.++.+ +..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 42 257889999999999999999999999776652 34566778899999999999998887 46899
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhh-cceEEEEecCcEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDA-FDELFLMKRGGQEI 1061 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~-fD~v~ll~~gg~~v 1061 (1426)
|||||||+||||++.+|++|+.||||.+||+..+..||+++.++.+.|.|||+.||+. ++.+. --+++.|.+ |+++
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~--~lv~~~~~rvl~l~~-Grl~ 216 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDL--ELVNRMRHRVLALED-GRLV 216 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccH--HHHHhccCcEEEEeC-CEEE
Confidence 9999999999999999999999999999999999999999999998999999999995 45544 467888875 7887
Q ss_pred EEcC
Q 000556 1062 YVGP 1065 (1426)
Q Consensus 1062 ~~G~ 1065 (1426)
....
T Consensus 217 ~d~~ 220 (223)
T COG2884 217 RDES 220 (223)
T ss_pred eccc
Confidence 6554
No 69
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-39 Score=353.25 Aligned_cols=206 Identities=28% Similarity=0.440 Sum_probs=185.8
Q ss_pred CceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCc---cCCc-ccccceEEEeccCCCCCC
Q 000556 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGY---PKKQ-ETFARISGYCEQNDIHSP 927 (1426)
Q Consensus 852 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~q~~~~~~ 927 (1426)
+...+++|||+.|+.||++||+|||||||||||++|||..++ ..|.|.+||. +.++ ....|.+|||+|+..+++
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 345789999999999999999999999999999999998874 4899999998 5544 334678999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCC
Q 000556 928 FVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1007 (1426)
Q Consensus 928 ~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEP 1007 (1426)
.+||.+|+.|+..++ ...++....+.+++++|+.++|++..+.. +.+|||||||||++||||+..|++|+||||
T Consensus 91 HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEP 164 (345)
T COG1118 91 HMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEP 164 (345)
T ss_pred cchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCC
Confidence 999999999998777 33455667788899999999999999887 468999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCC
Q 000556 1008 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1426)
Q Consensus 1008 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~ 1067 (1426)
.++||+.-+..+.+-|+++.++ |.|+|++|||+. |+++.+|||++|++ |++.-.||.+
T Consensus 165 f~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 165 FGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 9999999999999999999876 999999999996 79999999999986 7888888863
No 70
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.2e-39 Score=366.80 Aligned_cols=214 Identities=27% Similarity=0.403 Sum_probs=192.4
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|++-.+. +..+|+|||++|++||.++|+|||||||||||++|||... +.+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 477888876663 2229999999999999999999999999999999999876 4589999999988
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 908 KQ-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 908 ~~-~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
+. ....|.+++|+|+..++|++||+||+.|+.+.+ ..++++.+++|+++.+.++|.+..|++ +++||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~---~~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLR---GVPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhC---CCchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhH
Confidence 76 345688999999999999999999999998776 345677888999999999999999998 468999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
|||+|||||+++|++++||||.|+||++.+..+...|+++.++ |.|+|.+|||.. |...++||+.+|+ +|++.-.|.
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998765 899999999985 7999999999998 589999887
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 218 p 218 (338)
T COG3839 218 P 218 (338)
T ss_pred h
Confidence 6
No 71
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4e-38 Score=366.89 Aligned_cols=214 Identities=28% Similarity=0.409 Sum_probs=187.7
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|++..+. ++.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p--~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHP--DAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEec
Confidence 588999988773 34699999999999999999999999999999999998763 489999999986
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000556 908 KQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1426)
Q Consensus 908 ~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 985 (1426)
.. ...++.+|||+|++.+++.+||+|++.|.+.++. .+..+..++++++++.++|.+..++.+ ++||+||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHH
Confidence 53 2346779999999999999999999998766542 233444556889999999998888875 5799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 986 rqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
|||++||+||+++|++|||||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999877999999999997 68889999999986 79999998
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 5
No 72
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-38 Score=346.44 Aligned_cols=208 Identities=27% Similarity=0.414 Sum_probs=175.2
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCC--CCCCCCCH
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHD--NHIGEMTV 243 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d--~~~~~lTV 243 (1426)
++|+|||+.+++|++++|+||||||||||+|+|+|.++|. +|+|.++|.+......+..+|||||.. .+-..+||
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV 94 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITV 94 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCH
Confidence 4999999999999999999999999999999999999998 999999999887766667899999953 33344799
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+|.+..+..-+. .+ .... ..+.+..+++.|+.+|+.+.+|..+| .
T Consensus 95 ~d~V~~g~~~~~--g~---~~~~-------------------------~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~ 139 (254)
T COG1121 95 KDVVLLGRYGKK--GW---FRRL-------------------------NKKDKEKVDEALERVGMEDLRDRQIG-----E 139 (254)
T ss_pred HHHHHccCcccc--cc---cccc-------------------------cHHHHHHHHHHHHHcCchhhhCCccc-----c
Confidence 999998732211 00 0000 01124567889999999999998887 4
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|++.|+++.+. +.+|+.++|+...+.+.||+|+.|+ +++
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln-~~~ 216 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLN-RHL 216 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEc-Cee
Confidence 9999999999999999999999999999999999999999999998764 5556668999999999999999995 478
Q ss_pred EEecChhhHHH
Q 000556 404 VYQGPRELVLE 414 (1426)
Q Consensus 404 v~~G~~~~~~~ 414 (1426)
++.|+++++.+
T Consensus 217 ~~~G~~~~~~~ 227 (254)
T COG1121 217 IASGPPEEVLT 227 (254)
T ss_pred EeccChhhccC
Confidence 89999988753
No 73
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-39 Score=331.65 Aligned_cols=218 Identities=22% Similarity=0.318 Sum_probs=188.0
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCC---CCceEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRK---TGGYITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~---~~~~~~G~i~i~g 904 (1426)
.++.+|++..|. ++++|+|||+.|++++++|+||||||||||||++|-... ++-.++|+|.++|
T Consensus 7 ~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 578889988773 467999999999999999999999999999999998743 3446889999999
Q ss_pred ccCCcc-----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000556 905 YPKKQE-----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 905 ~~~~~~-----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 979 (1426)
.++... ..|+.+|.|+|.+.-|| +|++||+.|+.++..-.+ ++-++.|++.|+...|++......... ..
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s-a~ 148 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS-AL 148 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC-cc
Confidence 876542 46888999999999999 999999999988764332 667788999999999987544333322 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
+|||||+|||||||+|+-+|+||+||||||+|||.+...|-+++.+++ +.-|||++||.+. ......|+...+.. |+
T Consensus 149 ~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G~ 225 (253)
T COG1117 149 GLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-GE 225 (253)
T ss_pred CCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-cE
Confidence 799999999999999999999999999999999999999999999997 4699999999986 57788999999986 79
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
+|.+|+.
T Consensus 226 LvE~g~T 232 (253)
T COG1117 226 LVEFGPT 232 (253)
T ss_pred EEEEcCH
Confidence 9999997
No 74
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3e-38 Score=341.71 Aligned_cols=196 Identities=29% Similarity=0.432 Sum_probs=167.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1426)
..+|+++|+.|++||+++|+|||||||||||++|+|...|+ +|.|.++|.++..+.. ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 68999999999999999999999999999999999999998 9999999998876643 3579999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
+|++||+||+.+...+.+.... +.+..++.+++.+||.+..+
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~---- 136 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLL---- 136 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhc----
Confidence 9999999999988766543210 12234677899999997665
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+..+..|||||||||+|||||+.+|++++.||||.+||+.++..|++.++++++.. +++|+.++|+ +++...|||++.
T Consensus 137 ~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~-g~tii~VTHd-~~lA~~~dr~i~ 214 (226)
T COG1136 137 KKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKER-GKTIIMVTHD-PELAKYADRVIE 214 (226)
T ss_pred cCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhc-CCEEEEEcCC-HHHHHhCCEEEE
Confidence 13345799999999999999999999999999999999999999999999998754 4445546665 577889999999
Q ss_pred ecCCeE
Q 000556 398 LSDGQI 403 (1426)
Q Consensus 398 L~~G~i 403 (1426)
|.+|++
T Consensus 215 l~dG~~ 220 (226)
T COG1136 215 LKDGKI 220 (226)
T ss_pred EeCCee
Confidence 999994
No 75
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.8e-39 Score=328.24 Aligned_cols=206 Identities=32% Similarity=0.373 Sum_probs=182.6
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1426)
.++++||||.++.||+++|+|||||||||+|++|++++.|+ +|+|+++|.+..+.. .++.+|.++.+..++..||
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT 91 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLT 91 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhhh
Confidence 44899999999999999999999999999999999999999 999999999875432 3578999998888999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
+||||.|-+++.+.. + .+.+.+++.+.+.|+|.+|.|+.+|
T Consensus 92 ~rEnl~~Fa~L~~l~----------~------------------------~~~kari~~l~k~l~l~~~~~rRv~----- 132 (245)
T COG4555 92 ARENLKYFARLNGLS----------R------------------------KEIKARIAELSKRLQLLEYLDRRVG----- 132 (245)
T ss_pred HHHHHHHHHHHhhhh----------h------------------------hHHHHHHHHHHHHhChHHHHHHHHh-----
Confidence 999999988765431 1 2245678889999999999999998
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
++|-|+||||+|||||+++|+++++||||||||..+...+.+.++++. ..+.+|+..+|..+|+.++||+|++|++|+
T Consensus 133 ~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k--~egr~viFSSH~m~EvealCDrvivlh~Ge 210 (245)
T COG4555 133 EFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLK--NEGRAVIFSSHIMQEVEALCDRVIVLHKGE 210 (245)
T ss_pred hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhh--cCCcEEEEecccHHHHHHhhheEEEEecCc
Confidence 599999999999999999999999999999999999999999999874 335566667899999999999999999999
Q ss_pred EEEecChhhHHH
Q 000556 403 IVYQGPRELVLE 414 (1426)
Q Consensus 403 iv~~G~~~~~~~ 414 (1426)
+++.|+.+++..
T Consensus 211 vv~~gs~~~l~~ 222 (245)
T COG4555 211 VVLEGSIEALDA 222 (245)
T ss_pred EEEcCCHHHHHH
Confidence 999999987754
No 76
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-38 Score=365.90 Aligned_cols=215 Identities=27% Similarity=0.385 Sum_probs=192.6
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.++++|++-.+ ++..+|+|||++|++||+++|+|||||||||||++|||...+ .+|+|.++|.++
T Consensus 5 ~l~i~~v~k~y-------------g~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p--~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSF-------------GDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQP--SSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeec-------------CCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEC
Confidence 57888887665 346799999999999999999999999999999999998774 489999999998
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 908 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 908 ~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
... ..+|.+|+|+|+..+||++||+||+.|+.+++ ....+++.+++|+++++.++|.+..++.+ ..||||||
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHHH
Confidence 763 35788999999999999999999999987643 33455667889999999999999998874 68999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
|||+|||||+.+|++|+||||.|+||..-+..++..|+++.++ |.|.|++|||.. |...+.|||.+|++ |++.-.|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 9999999999999999999999999999999999999998765 999999999986 78899999999985 78988887
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 221 P 221 (352)
T COG3842 221 P 221 (352)
T ss_pred H
Confidence 6
No 77
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-38 Score=332.73 Aligned_cols=217 Identities=26% Similarity=0.376 Sum_probs=181.6
Q ss_pred ccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCC
Q 000556 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDN 236 (1426)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1426)
..+++|+|||+.|++|||++|+|||||||||||++|.|..+++ +|+|.+||.++..... ++.+||++|+..
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~n 91 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFN 91 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCC
Confidence 3467999999999999999999999999999999999999998 9999999988765542 468999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1426)
+.+.+||.+|+..+..-+. +..+.+ .+..+ .+.+..+-+.|+.+|+.+.+.+..
T Consensus 92 Lv~r~sv~~NVl~grl~~~--s~~~sl---------fglfs---------------k~dk~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 92 LVPRLSVLENVLLGRLGYT--STWRSL---------FGLFS---------------KEDKAQALDALERVGILDKAYQRA 145 (258)
T ss_pred cccccHHHHHHHhhhcccc--hHHHHH---------hCCCC---------------HHHHHHHHHHHHHcCcHHHHHHHh
Confidence 9999999999998753221 111111 11111 122345567799999999988877
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
+ .|||||+|||+|||||+.+|++++-|||+++||+.++.++++.|++++...+.|+|+. +|..+-+.++||||+
T Consensus 146 ~-----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~n-LH~vdlA~~Y~~Rii 219 (258)
T COG3638 146 S-----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVN-LHQVDLAKKYADRII 219 (258)
T ss_pred c-----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEE-echHHHHHHHHhhhe
Confidence 6 5999999999999999999999999999999999999999999999988766666665 455678899999999
Q ss_pred EecCCeEEEecChhhHHH
Q 000556 397 LLSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1426)
-|++|+|+|.||++++-+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999988654
No 78
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.2e-37 Score=363.37 Aligned_cols=217 Identities=23% Similarity=0.293 Sum_probs=186.6
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|+++.++... ....+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~~---------~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p--~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQGT---------KTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCCC---------cceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 57889988774210 124699999999999999999999999999999999998763 4899999998765
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
.. ..++.+||++|+..+++..||+||+.|....+ ..+.++.++++.++++.+||.+..|..+ ..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 32 13567999999999999999999999875543 2344556677899999999999888764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v 1061 (1426)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||+++|+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999875 999999999986 57789999999985 7999
Q ss_pred EEcCC
Q 000556 1062 YVGPL 1066 (1426)
Q Consensus 1062 ~~G~~ 1066 (1426)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99885
No 79
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-37 Score=348.39 Aligned_cols=213 Identities=24% Similarity=0.348 Sum_probs=180.9
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccc
Confidence 5678877763 24699999999999999999999999999999999998663 48999999987543
Q ss_pred ------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 910 ------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 910 ------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
..+++.++|++|++.+++.+||.||+.+...... ..+.+..++.++++++.++|.+..++.+ ..|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 1245679999999999999999999988643221 1233444567889999999988777664 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
||||||+||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~ 217 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVA 217 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999874 899999999986 57788999999985 78988
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
.|+.
T Consensus 218 ~g~~ 221 (235)
T cd03261 218 EGTP 221 (235)
T ss_pred ecCH
Confidence 8874
No 80
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=4.5e-37 Score=360.71 Aligned_cols=206 Identities=23% Similarity=0.331 Sum_probs=177.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1426)
.++|+|||++|++||+++|+||||||||||+++|+|..+|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999998 9999999998876532 45799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+.+||+||+.|+.+..+... .+...++.++++.+||.+..|..+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~~-- 138 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSYP-- 138 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998765432110 012234677899999998877554
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
+.|||||||||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+..+ .+|+.++|..+.+.++||+|++|
T Consensus 139 ---~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g-~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 139 ---SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLG-LTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 57999999999999999999999999999999999999999999999876434 44555788889999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000556 399 SDGQIVYQGPRELVL 413 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1426)
++|++++.|+.+++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 81
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.3e-37 Score=364.51 Aligned_cols=214 Identities=25% Similarity=0.359 Sum_probs=188.6
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.++++|++..+. .+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 478899988763 3468999999999999999999999999999999999876 3589999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 908 KQ-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 908 ~~-~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
.. ...+|.+|||+|+..++|.+||+||+.|....+ ..+..+.+++++++++.++|.+..++.+ ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHH
Confidence 53 223577999999999999999999999986543 2345566778999999999999888763 58999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
|||+|||||+.+|++|+|||||++||..++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 999999999996 68899999999986 79999998
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 219 ~ 219 (353)
T TIGR03265 219 P 219 (353)
T ss_pred H
Confidence 6
No 82
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-37 Score=365.00 Aligned_cols=214 Identities=25% Similarity=0.364 Sum_probs=187.2
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|++..++ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 77888887762 12469999999999999999999999999999999999876 35899999998765
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000556 909 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1426)
Q Consensus 909 ~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 987 (1426)
.. ..++.+|||+|++.++|.+||+||+.|....+ ..+..+.+++++++++.++|.+..++.+ ..|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHH
Confidence 32 23467999999999999999999999976543 2344555677999999999999888874 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 988 Rl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++.+++|++++|++ |+++..|+.
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999999999999999999999999998775 999999999986 68899999999985 899999986
No 83
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=6.9e-37 Score=359.95 Aligned_cols=215 Identities=27% Similarity=0.379 Sum_probs=187.4
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..+.++|++..++ ++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEE
Confidence 3588999988773 34699999999999999999999999999999999998764 48999999988
Q ss_pred CCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 907 KKQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 907 ~~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
... ...++.+||++|++.+++.+||.|++.+.+.++. .+..+..+.++++++.++|.+..++.+ +.||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHH
Confidence 643 2345679999999999999999999987665442 223334456788999999998888875 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
||||++||+||+++|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999878999999999987 68889999999986 7999999
Q ss_pred CC
Q 000556 1065 PL 1066 (1426)
Q Consensus 1065 ~~ 1066 (1426)
+.
T Consensus 255 ~~ 256 (340)
T PRK13536 255 RP 256 (340)
T ss_pred CH
Confidence 85
No 84
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-37 Score=361.97 Aligned_cols=214 Identities=24% Similarity=0.381 Sum_probs=188.7
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|++..+. +..+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKP--TEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 488999988773 24689999999999999999999999999999999998763 489999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 908 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 908 ~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
... ..++.+|||+|+..++|.+||+||+.|....+ ..+..+.+++++++++.++|.+..+..+ ..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKML---GVPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 542 23577999999999999999999999986543 2345566778999999999998887763 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||++. ++.+++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999996 68899999999986 79999998
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 221 ~ 221 (351)
T PRK11432 221 P 221 (351)
T ss_pred H
Confidence 6
No 85
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=323.58 Aligned_cols=222 Identities=25% Similarity=0.384 Sum_probs=178.2
Q ss_pred cceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCceeEEEEcCccCCCCC-----ccceEEEecCCCC
Q 000556 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDS--SLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDN 236 (1426)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~ 236 (1426)
++.+|+|||+.|+++++||++|||||||||||++|....+. ..+++|+|.++|+++.+.. .++.+|.|+|.|.
T Consensus 19 ~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPn 98 (253)
T COG1117 19 DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPN 98 (253)
T ss_pred chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCC
Confidence 35699999999999999999999999999999999987553 4678999999999876532 3688999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc-ccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV-CADTM 315 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1426)
-|| +|++||+.|+.+..|... +.+. .+++..|+.-+|-+ .+|.+
T Consensus 99 PFp-~SIydNVayG~r~~g~~~--~~ld--------------------------------eiVe~sLk~AaLWdEVKDrL 143 (253)
T COG1117 99 PFP-MSIYDNVAYGLRLHGIKD--KELD--------------------------------EIVESSLKKAALWDEVKDRL 143 (253)
T ss_pred CCC-chHHHHHHHhHHhhccch--HHHH--------------------------------HHHHHHHHHhHhHHHhHHHh
Confidence 999 999999999999887533 1111 12222222222221 12211
Q ss_pred ccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 316 vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
++...+|||||+||++|||||+-+|+||+||||||+|||.++..|-+.+.++.+ .-+||.++|.+..+.+..|+.
T Consensus 144 --~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~t 218 (253)
T COG1117 144 --HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDYT 218 (253)
T ss_pred --hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHhh
Confidence 123347999999999999999999999999999999999999999999999853 445555889999999999999
Q ss_pred EEecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHH
Q 000556 396 ILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl 433 (1426)
..+..|+++++|+.+++ |..|.++...||+
T Consensus 219 aFf~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 219 AFFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 99999999999999987 3467776666665
No 86
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=6e-37 Score=362.63 Aligned_cols=214 Identities=24% Similarity=0.335 Sum_probs=188.1
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEE--EEEEEcCc
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYIT--GNITISGY 905 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~--G~i~i~g~ 905 (1426)
.+.++|+++.+. +..+|+|+|+++++||+++|+|||||||||||++|+|...+ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 578899988773 24699999999999999999999999999999999998764 36 99999998
Q ss_pred cCCcc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 906 PKKQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 906 ~~~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
+.... ..++.+|||+|+..++|.+||+||+.|....+ ..+..+.+++++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 76432 23567999999999999999999999986543 2344556677999999999999888874 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 799999999986 68899999999985 79999
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
.|+.
T Consensus 220 ~g~~ 223 (362)
T TIGR03258 220 HGEP 223 (362)
T ss_pred EcCH
Confidence 9985
No 87
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-37 Score=339.83 Aligned_cols=210 Identities=28% Similarity=0.408 Sum_probs=177.1
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
+++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 5677777663 2469999999999999999999999999999999999865 358999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000556 910 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1426)
Q Consensus 910 ~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 988 (1426)
. ..++.++|++|++.+++.+|++|++.+..... ....+..++.++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 2 23456899999998888999999998765432 1223344556889999999988777764 5799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 989 l~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999764 999999999986 57788999999986 6777654
No 88
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-37 Score=362.42 Aligned_cols=206 Identities=25% Similarity=0.364 Sum_probs=178.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1426)
+.+|+|+|+.+++||+++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++||+|++.++|.+||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 46999999999999999999999999999999999999988 9999999998876544 4689999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.|+.+.++... .+...+++++++.+||++..+..+ +.
T Consensus 94 ~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 134 (356)
T PRK11650 94 RENMAYGLKIRGMPK----------------------------------AEIEERVAEAARILELEPLLDRKP-----RE 134 (356)
T ss_pred HHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hh
Confidence 999999865432110 012235678899999998777554 57
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
|||||||||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+.. +++++.++|+..++.+++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRL-KTTSLYVTHDQVEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999986533 45566688888999999999999999999
Q ss_pred EEecChhhHH
Q 000556 404 VYQGPRELVL 413 (1426)
Q Consensus 404 v~~G~~~~~~ 413 (1426)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999999874
No 89
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.7e-37 Score=372.01 Aligned_cols=213 Identities=23% Similarity=0.432 Sum_probs=177.0
Q ss_pred CCCcccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCC
Q 000556 159 PSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHD 235 (1426)
Q Consensus 159 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d 235 (1426)
|.| ++.+||+|+|++|+|||.|||+|||||||||+.++|...++|+ +|+|.+||+|+.+.++ ++.+|+|.|+|
T Consensus 476 P~R-p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEP 551 (716)
T KOG0058|consen 476 PTR-PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEP 551 (716)
T ss_pred CCC-CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccc
Confidence 444 3477999999999999999999999999999999999999998 9999999999998876 48899999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 000556 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTM 315 (1426)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1426)
.+|.. ||+|||.|+.. . .+.|+...++... ...+. +.++++.+||.
T Consensus 552 vLFs~-sI~eNI~YG~~--~-----------------------~t~e~i~~AAk~A-----Nah~F---I~~~p~gY~T~ 597 (716)
T KOG0058|consen 552 VLFSG-SIRENIAYGLD--N-----------------------ATDEEIEAAAKMA-----NAHEF---ITNFPDGYNTV 597 (716)
T ss_pred eeecc-cHHHHHhcCCC--C-----------------------CCHHHHHHHHHHh-----ChHHH---HHhCccccccc
Confidence 88875 99999999864 1 1111111111110 11122 34789999999
Q ss_pred ccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 316 vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
||+++. .||||||||++|||||+++|+||||||.||+||+.+...+.+.|.+..+ ++|+++ |.|. -.+.+.+|+|
T Consensus 598 VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlv-IAHR-LSTV~~Ad~I 672 (716)
T KOG0058|consen 598 VGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLV-IAHR-LSTVRHADQI 672 (716)
T ss_pred cCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEE-Eehh-hhHhhhccEE
Confidence 999877 6999999999999999999999999999999999999999999988653 455555 5554 4677889999
Q ss_pred EEecCCeEEEecChhhHHH
Q 000556 396 ILLSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1426)
+++++|++++.|+++|+++
T Consensus 673 vvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 673 VVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred EEEcCCeEEecccHHHHhh
Confidence 9999999999999999875
No 90
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-37 Score=361.31 Aligned_cols=206 Identities=22% Similarity=0.361 Sum_probs=179.2
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1426)
..+|+|+|+++++||+++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++||+|+..++|.+||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999998 9999999998876555 3789999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.|+.+.++... .+.+..++++++.+||.+..+.. ++.
T Consensus 96 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r~-----~~~ 136 (351)
T PRK11432 96 GENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDRY-----VDQ 136 (351)
T ss_pred HHHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhh
Confidence 999999875433211 11233567889999998877644 457
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
|||||||||+|||||+.+|++|+||||+++||+.++.++.+.|+++.+.. +++++.++|+..++.+++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQF-NITSLYVTHDQSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999986543 45556688999999999999999999999
Q ss_pred EEecChhhHH
Q 000556 404 VYQGPRELVL 413 (1426)
Q Consensus 404 v~~G~~~~~~ 413 (1426)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 91
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=6.6e-37 Score=357.12 Aligned_cols=202 Identities=27% Similarity=0.380 Sum_probs=177.3
Q ss_pred ceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcc--cccceEEEeccCCCCCCCCC
Q 000556 853 KLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE--TFARISGYCEQNDIHSPFVT 930 (1426)
Q Consensus 853 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~--~~~~~~gyv~q~~~~~~~lT 930 (1426)
++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.... ..++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRP--TSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 45799999999999999999999999999999999998763 489999999876432 24567999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCC
Q 000556 931 VYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1010 (1426)
Q Consensus 931 v~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsg 1010 (1426)
|+|++.+.+.++. ......+++++++++.++|.+..++.+ +.|||||||||+||+||+++|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765542 233444567899999999998888774 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1011 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1011 LD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
||+.++..+++.|++++++|+|||+++|++. ++.+.||++++|++ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999878999999999986 68889999999986 799999875
No 92
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1e-36 Score=359.38 Aligned_cols=208 Identities=21% Similarity=0.294 Sum_probs=179.5
Q ss_pred cceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCC
Q 000556 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDN 236 (1426)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1426)
.+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 456999999999999999999999999999999999999998 9999999999876544 467999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1426)
+++.+||+||+.|+.+..+... .+...++.++++.+||++..++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCCh
Confidence 9999999999999865443210 012234677899999987776554
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
..|||||||||+|||||+.+|+++||||||+|||+.++..+.+.|+++.+.. +.+|+.++|+..++..++|+|+
T Consensus 128 -----~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~-~~Tii~vTHd~~ea~~~~drI~ 201 (363)
T TIGR01186 128 -----DELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATL-QKTIVFITHDLDEAIRIGDRIV 201 (363)
T ss_pred -----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 4699999999999999999999999999999999999999999999886533 4455668899999999999999
Q ss_pred EecCCeEEEecChhhHHH
Q 000556 397 LLSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1426)
+|++|+++..|+++++..
T Consensus 202 vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEeCCEEEeeCCHHHHHh
Confidence 999999999999998753
No 93
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-36 Score=338.47 Aligned_cols=215 Identities=25% Similarity=0.353 Sum_probs=179.9
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
.++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 70 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERP--TSGEVLVDGEPVTG 70 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECcc
Confidence 567777766310 0114699999999999999999999999999999999998653 48999999987643
Q ss_pred ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000556 910 ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRL 989 (1426)
Q Consensus 910 ~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl 989 (1426)
.++.++|++|++.+++.+|++|++.+....+. ...+...+.++++++.++|.+..++.+ ..||||||||+
T Consensus 71 --~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl 140 (220)
T cd03293 71 --PGPDRGYVFQQDALLPWLTVLDNVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRV 140 (220)
T ss_pred --ccCcEEEEecccccccCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHH
Confidence 35678999999988888999999988654331 223344567889999999988777764 57999999999
Q ss_pred HHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEec-CcEEEEEcCC
Q 000556 990 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKR-GGQEIYVGPL 1066 (1426)
Q Consensus 990 ~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~~-gg~~v~~G~~ 1066 (1426)
+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|++. ++.+.+|++++|++ .|+++..++.
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999999999999865 4899999999986 57788999999985 4888887764
No 94
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1e-36 Score=339.26 Aligned_cols=207 Identities=24% Similarity=0.318 Sum_probs=175.5
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKP--TRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEehh
Confidence 567888887731 123599999999999999999999999999999999998653 4799999998754
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
.. .+++.++|++|++.+++.+||.||+.+....+. ...+..+++++++++.++|.+..++.+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 135679999999998899999999988654331 223344567899999999988877764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++|
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~G 214 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSRG 214 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999777999999999986 577789999999863
No 95
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=7.3e-37 Score=361.58 Aligned_cols=207 Identities=26% Similarity=0.395 Sum_probs=179.3
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1426)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ +|.++||+|+..+||.+||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 45899999999999999999999999999999999999998 9999999998875544 4679999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.|+.+.++... .+....++++++.+||++..|.. ++.
T Consensus 94 ~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~L~~~~~~~-----~~~ 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMGR----------------------------------AEVAERVAELLDLVGLPGSERKY-----PGQ 134 (353)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCCchhhCC-----hhh
Confidence 999999865432110 01223567899999999887754 457
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
|||||||||+|||||+.+|++++||||+++||..++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-~~tvi~vTHd~~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRL-GVTTIMVTHDQEEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999986543 45555578888999999999999999999
Q ss_pred EEecChhhHHH
Q 000556 404 VYQGPRELVLE 414 (1426)
Q Consensus 404 v~~G~~~~~~~ 414 (1426)
++.|+++++.+
T Consensus 214 ~~~g~~~~~~~ 224 (353)
T TIGR03265 214 EQVGTPQEIYR 224 (353)
T ss_pred EEEcCHHHHHh
Confidence 99999988753
No 96
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-36 Score=336.44 Aligned_cols=209 Identities=24% Similarity=0.412 Sum_probs=177.7
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 5677777663 2469999999999999999999999999999999999865 358999999987643
Q ss_pred ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000556 910 ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRL 989 (1426)
Q Consensus 910 ~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl 989 (1426)
..++.++|++|++.+++.+|++|++.+....+. ......++.++++++.+++.+..++.+ ..||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHH
Confidence 345678999999998889999999988654432 223344566889999999988777653 57999999999
Q ss_pred HHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 990 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 990 ~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999998877899999999986 57788999999986 6777654
No 97
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-37 Score=338.96 Aligned_cols=214 Identities=22% Similarity=0.339 Sum_probs=188.3
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|++|.++. ...+|+|+|+.+++||.++|+|+||||||||+++|+|...+ .+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeecc
Confidence 678999998852 24799999999999999999999999999999999998764 4799999999865
Q ss_pred ----cccccceEEEeccCCCCC-CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 909 ----QETFARISGYCEQNDIHS-PFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 909 ----~~~~~~~~gyv~q~~~~~-~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
....++.+|||+|++..+ -.-||.|.+.|+..-. ..+.++.+++++++++.+|+.+.++.. +..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 345678899999998664 4569999999986432 455667888999999999999998876 468999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
||||||+||.+|+.+|++|+|||||||||+.++..+++.++++..+ |.|||+++|+.. .+.+.+|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999877 799999999986 58888999999986 79999
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
.|+.
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9974
No 98
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=359.06 Aligned_cols=216 Identities=24% Similarity=0.374 Sum_probs=186.3
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++.
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 67888887763 24699999999999999999999999999999999998763 4799999998765
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 909 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 909 ~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
.. ..++.+|||+|++.++|.+||+||+.|....+.. ...+.++.+++++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 32 2346799999999999999999999987653211 12344555678999999999998888774 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||++. ++...+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999876 899999999986 68899999999985 79999997
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 221 ~ 221 (353)
T PRK10851 221 P 221 (353)
T ss_pred H
Confidence 5
No 99
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-37 Score=325.92 Aligned_cols=206 Identities=27% Similarity=0.320 Sum_probs=177.2
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC----ccceEEEecCCC--CCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV----PERTAAYISQHD--NHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d--~~~ 238 (1426)
.++|+|||++|.+||..+|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+.+|+||+ .+-
T Consensus 20 ~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLn 96 (252)
T COG1124 20 FHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLN 96 (252)
T ss_pred hhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccC
Confidence 36999999999999999999999999999999999999998 999999998776543 346789999997 578
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
|..||++.|.-+.+..+... ...++.++|+.+||+...- +
T Consensus 97 P~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~l----~ 136 (252)
T COG1124 97 PRRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSFL----D 136 (252)
T ss_pred cchhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHHH----h
Confidence 89999999987655432211 1123677899999986433 4
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
+.+..|||||||||+|||||..+|++|++|||||+||++...+|++.|.++.+. .+.+++.++|+..-+..+||||++|
T Consensus 137 R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~-~~lt~l~IsHdl~~v~~~cdRi~Vm 215 (252)
T COG1124 137 RRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKE-RGLTYLFISHDLALVEHMCDRIAVM 215 (252)
T ss_pred cCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHh-cCceEEEEeCcHHHHHHHhhheeee
Confidence 566789999999999999999999999999999999999999999999998764 5566777999999999999999999
Q ss_pred cCCeEEEecChhhHHH
Q 000556 399 SDGQIVYQGPRELVLE 414 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1426)
++|++++.++.+++.+
T Consensus 216 ~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 216 DNGQIVEIGPTEELLS 231 (252)
T ss_pred eCCeEEEeechhhhhc
Confidence 9999999999998864
No 100
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=9.6e-37 Score=360.88 Aligned_cols=207 Identities=23% Similarity=0.344 Sum_probs=179.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCce--eEEEEcCccCCCCCc-cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVS--GRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~--G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 241 (1426)
..+|+|+|++|++|++++|+|||||||||||++|+|..+|+ + |+|.++|+++....+ ++.++||+|+..+++.+
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 45899999999999999999999999999999999999988 8 999999998865544 46799999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
||+||+.|+.+..+... .+....++++++.+||++..|+.+
T Consensus 95 tv~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~~~----- 135 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAHLP----- 135 (362)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhCCh-----
Confidence 99999999875432110 012235678899999998877655
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
+.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|
T Consensus 136 ~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 136 AQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 47999999999999999999999999999999999999999999999875432556666889999999999999999999
Q ss_pred eEEEecChhhHH
Q 000556 402 QIVYQGPRELVL 413 (1426)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1426)
+++..|+++++.
T Consensus 216 ~i~~~g~~~~~~ 227 (362)
T TIGR03258 216 RLAAHGEPQALY 227 (362)
T ss_pred EEEEEcCHHHHH
Confidence 999999999874
No 101
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.1e-36 Score=359.18 Aligned_cols=214 Identities=22% Similarity=0.327 Sum_probs=187.8
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETP--DSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 488999988773 24699999999999999999999999999999999998763 489999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 908 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 908 ~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
... ..++.+|||+|++.++|.+||+||+.|+...+ ..+..+.+++++++++.++|.+..++.+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 532 23567999999999999999999999976533 2344555667899999999999888874 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
|||+|||||+.+|++|+|||||+|||..++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999865 999999999986 68899999999985 89999988
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 5
No 102
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.1e-36 Score=336.05 Aligned_cols=211 Identities=26% Similarity=0.400 Sum_probs=178.4
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~ 65 (213)
T cd03301 1 VELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVT 65 (213)
T ss_pred CEEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 35678877763 2469999999999999999999999999999999999865 34899999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000556 909 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1426)
Q Consensus 909 ~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 987 (1426)
.. ..++.++|++|++.+++..|++||+.+....+ ....++.++.++++++.+++.+..+..+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (213)
T cd03301 66 DLPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQ 137 (213)
T ss_pred cCCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHH
Confidence 32 22457999999998888899999998765432 1223444556889999999988877764 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 988 Rl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
|++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++++|
T Consensus 138 r~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 138 RVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999999864 899999999986 57788999999986 7888765
No 103
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2e-36 Score=353.28 Aligned_cols=214 Identities=28% Similarity=0.379 Sum_probs=183.7
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.+. ++.+|+||||++++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 378889988773 24699999999999999999999999999999999998653 489999999875
Q ss_pred Ccc--cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000556 908 KQE--TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1426)
Q Consensus 908 ~~~--~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 985 (1426)
... ..++.+||++|++.+++.+||+|++.+.+..+ ..+.....+.++++++.++|.+..++.+ ..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYF---GMSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 432 23567999999999999999999998755432 1233334456788999999998887774 5799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 986 rqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 67789999999985 78999987
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 104
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-36 Score=337.38 Aligned_cols=213 Identities=28% Similarity=0.376 Sum_probs=180.6
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ ++.+|+|+|+++++||++||+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 65 (220)
T cd03265 1 IEVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKP--TSGRATVAGHDVV 65 (220)
T ss_pred CEEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecC
Confidence 35678877663 24699999999999999999999999999999999998653 4899999997654
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 909 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 909 ~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
. ...++.++|++|++.+++.+||+|++.+....+. .+.++.++.++++++.++|.+..++.+ ..||||||
T Consensus 66 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 137 (220)
T cd03265 66 REPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMR 137 (220)
T ss_pred cChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHH
Confidence 2 2234578999999998999999999988654431 223334556899999999988777764 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+
T Consensus 138 qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 215 (220)
T cd03265 138 RRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGT 215 (220)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 9999999999999999999999999999999999999999876 899999999986 57788999999985 78888876
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 216 ~ 216 (220)
T cd03265 216 P 216 (220)
T ss_pred h
Confidence 4
No 105
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.9e-37 Score=318.07 Aligned_cols=206 Identities=26% Similarity=0.343 Sum_probs=183.4
Q ss_pred cCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCccc----ccceEEEeccCCCCC
Q 000556 851 EDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQET----FARISGYCEQNDIHS 926 (1426)
Q Consensus 851 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~q~~~~~ 926 (1426)
++++++++|||+.+++||++||+|||||||||.+.++.|...+ .+|+|.+||.+++... -+.-+||+||++..|
T Consensus 14 y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 14 YKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred hCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 3567899999999999999999999999999999999998764 4899999999877632 233589999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeC
Q 000556 927 PFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1006 (1426)
Q Consensus 927 ~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDE 1006 (1426)
..+||+||+.-....+.. +....+++++++++|+.+++.+++++.. ..||||||+|+.|||||+.+|+.++|||
T Consensus 92 r~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDE 165 (243)
T COG1137 92 RKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDE 165 (243)
T ss_pred hcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecC
Confidence 999999999876666532 2233466677899999999999999873 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1007 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1007 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
|.+|+||.+...|+++++.+++.|.-|++|-|+.. |....+||.+++.+ |+++..|..
T Consensus 166 PFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p 223 (243)
T COG1137 166 PFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSP 223 (243)
T ss_pred CccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCH
Confidence 99999999999999999999999999999999998 79999999999996 799999986
No 106
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-37 Score=374.18 Aligned_cols=215 Identities=27% Similarity=0.439 Sum_probs=183.9
Q ss_pred CCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcC
Q 000556 825 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG 904 (1426)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 904 (1426)
-...++|+||+|+|+..+ +.++|+|+||+|+|||.|||+||||+||||+.++|....+ +.+|+|.+||
T Consensus 462 ~~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG 529 (716)
T KOG0058|consen 462 LQGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDG 529 (716)
T ss_pred ccceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECC
Confidence 345799999999998753 4679999999999999999999999999999999998766 4589999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH-------cCCccccccccc
Q 000556 905 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMEL-------VELKPLIQSLVG 974 (1426)
Q Consensus 905 ~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~-------l~L~~~~~~~vg 974 (1426)
+|+++ ..+++.+|+|.|+|.++. -||+||+.|+.. ..+.++ |+++.+. .++.+-.||.||
T Consensus 530 ~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~----i~~AAk~ANah~FI~~~p~gY~T~VG 599 (716)
T KOG0058|consen 530 VPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEE----IEAAAKMANAHEFITNFPDGYNTVVG 599 (716)
T ss_pred eehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHH----HHHHHHHhChHHHHHhCccccccccC
Confidence 99876 346789999999999986 599999999753 223322 3333332 356777899999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEE
Q 000556 975 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1054 (1426)
Q Consensus 975 ~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll 1054 (1426)
..| ..||||||||++|||||++||+||||||+||.||+++...|+++|.++.+ ++|||+++|+.| ..+.+|+|+++
T Consensus 600 EkG-~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi 675 (716)
T KOG0058|consen 600 EKG-SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVI 675 (716)
T ss_pred Ccc-ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEE
Confidence 876 47999999999999999999999999999999999999999999998865 699999999976 67899999999
Q ss_pred ecCcEEEEEcCC
Q 000556 1055 KRGGQEIYVGPL 1066 (1426)
Q Consensus 1055 ~~gg~~v~~G~~ 1066 (1426)
++ |+++..|.-
T Consensus 676 ~~-G~V~E~G~h 686 (716)
T KOG0058|consen 676 DK-GRVVEMGTH 686 (716)
T ss_pred cC-CeEEecccH
Confidence 86 799999863
No 107
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.9e-36 Score=359.57 Aligned_cols=218 Identities=28% Similarity=0.377 Sum_probs=184.6
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1426)
.++|+|+|+.+++||+++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++||+|++.++|.+||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 45899999999999999999999999999999999999988 9999999998876544 4679999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.|+.+.++... .+....++++++.+||++..+..+ ..
T Consensus 104 ~eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~p-----~~ 144 (375)
T PRK09452 104 FENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQRKP-----HQ 144 (375)
T ss_pred HHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 999999865332110 011234678899999998777554 57
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
|||||||||+|||||+.+|++|+||||+++||..++..+.+.|+++.+.. ++++|.++|+..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987643 45556688999999999999999999999
Q ss_pred EEecChhhHHHHHHhcCCCCCCCCChhHHH
Q 000556 404 VYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1426)
Q Consensus 404 v~~G~~~~~~~~F~~~Gf~cp~~~~~adfl 433 (1426)
+..|+++++.+ .|....+++|+
T Consensus 224 ~~~g~~~~i~~--------~p~~~~~a~~~ 245 (375)
T PRK09452 224 EQDGTPREIYE--------EPKNLFVARFI 245 (375)
T ss_pred EEEcCHHHHHh--------CcccHHHHHhc
Confidence 99999988743 45544455554
No 108
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-36 Score=356.68 Aligned_cols=217 Identities=22% Similarity=0.295 Sum_probs=184.6
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|++++++.. ..++.+|+|+||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p--~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERP--TSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 5788998887411 0135699999999999999999999999999999999998763 4899999998765
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
.. ..++.+||++|++.+++.+||+||+.+....+ ..+.++.+++++++++.+||.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 13567999999999999999999999875443 1233444567899999999998877764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v 1061 (1426)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 57788999999985 7999
Q ss_pred EEcCC
Q 000556 1062 YVGPL 1066 (1426)
Q Consensus 1062 ~~G~~ 1066 (1426)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 98875
No 109
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3e-36 Score=340.18 Aligned_cols=215 Identities=27% Similarity=0.350 Sum_probs=179.8
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
.++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 4677777663 2469999999999999999999999999999999999865 347999999987653
Q ss_pred cc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCC-------CCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000556 910 ET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPE-------VDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1426)
Q Consensus 910 ~~----~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~-------~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 978 (1426)
.. .++.++|++|++.+++.+||+|++.+....+.... .......+.++++++.+++.+..++.+
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA----- 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----
Confidence 21 23458999999999999999999988654321110 112334556889999999988777663
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999999878999999999987 57788999999986 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
+++..|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 88888874
No 110
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=7.6e-37 Score=308.72 Aligned_cols=210 Identities=26% Similarity=0.351 Sum_probs=180.0
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
..++|.|+|.. .=-..+..|.+||++||+||||||||||||+|+|...+ .+|+|+|||.+...
T Consensus 3 ~L~~V~~~y~~---------------~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~ 65 (231)
T COG3840 3 ALDDVRFSYGH---------------LPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTA 65 (231)
T ss_pred cccceEEeeCc---------------ceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCc
Confidence 45677777743 12367789999999999999999999999999998774 48999999998654
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000556 910 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1426)
Q Consensus 910 ~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 988 (1426)
. ...|-++.++|+..+|..+||.+|+.++..--+ .. ..+.++.++.++..+||..+.+.+. ..||||||||
T Consensus 66 ~~P~~RPVSmlFQEnNLFaHLtV~qNigLGl~P~L--kL-~a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQR 137 (231)
T COG3840 66 SPPAERPVSMLFQENNLFAHLTVAQNIGLGLSPGL--KL-NAEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQR 137 (231)
T ss_pred CCcccCChhhhhhccccchhhhhhhhhcccCCccc--cc-CHHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHH
Confidence 3 345678899999999999999999987642111 12 2344567999999999999999985 4799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 989 l~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
|++||+|+++-+||+||||.|.||+.-+.++..++.+++++ +.|++++||+|+ |.....|+++++++ |++.+.|+.
T Consensus 138 vALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 138 VALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 99999999999999999999999999999999999999865 999999999997 79999999999986 799999986
No 111
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.5e-36 Score=336.55 Aligned_cols=215 Identities=27% Similarity=0.425 Sum_probs=180.1
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++... ....+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~~---------~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDVK---------KTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEP--DAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCCC---------ccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEEcc
Confidence 56788887764210 112699999999999999999999999999999999998653 4899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 909 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 909 ~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
. ..+++.++|++|++.+++.+||+||+.+....+ .....+..+.++++++.+++.+..++.+ ..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 3 234567999999998889899999998765433 1233445567899999999988777764 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999777999999999986 57788999999986 6776643
No 112
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-36 Score=338.95 Aligned_cols=216 Identities=25% Similarity=0.378 Sum_probs=181.1
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ .+.+|+|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 67888888773 2469999999999999999999999999999999999865 35899999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 909 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 909 ~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
.. ..++.++|++|++.+++.+||.||+.+....+.. .........+.++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHH
Confidence 32 2245689999999888889999999886543211 00122334456889999999988777664 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 220 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGT 220 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecC
Confidence 9999999999999999999999999999999999999999875 899999999986 57788999999985 78888887
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 221 ~ 221 (239)
T cd03296 221 P 221 (239)
T ss_pred H
Confidence 4
No 113
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.3e-36 Score=338.92 Aligned_cols=212 Identities=26% Similarity=0.348 Sum_probs=179.8
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
.++|+++.++ .+.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKP--DSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 5677777663 24699999999999999999999999999999999998653 47999999987543
Q ss_pred c---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000556 910 E---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1426)
Q Consensus 910 ~---~-~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 985 (1426)
. . .++.++|++|++.+++.+||+|++.+....+. .......+.++++++.+++.+..++.+ ..|||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHH
Confidence 1 1 23468999999999999999999987643321 223344556889999999988777663 5799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 986 rqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 216 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGT 216 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeC
Confidence 99999999999999999999999999999999999999999877999999999986 68899999999985 78888887
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 217 ~ 217 (232)
T cd03218 217 P 217 (232)
T ss_pred H
Confidence 5
No 114
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-36 Score=356.59 Aligned_cols=214 Identities=23% Similarity=0.355 Sum_probs=187.4
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.++++|++..+. +..+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQP--TAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 488999987763 24699999999999999999999999999999999998763 489999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 908 KQ-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 908 ~~-~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
.. ...++.+|||+|++.++|.+||.||+.|....+ ..+..+.+++++++++.++|.+..++.+ .+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 43 234678999999999999999999999976543 2344556677999999999998888764 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
|||+|||||+.+|++|+|||||+|||..++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 9999999999999999999999999999999999999988654 999999999986 68899999999985 79999998
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 234 ~ 234 (377)
T PRK11607 234 P 234 (377)
T ss_pred H
Confidence 5
No 115
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-36 Score=358.57 Aligned_cols=214 Identities=25% Similarity=0.369 Sum_probs=185.3
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 377889887763 24699999999999999999999999999999999998763 489999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 908 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 908 ~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
... ..++.+||++|+..+++.+||+||+.|....+ ..+..+.+++++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLA---GAKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 432 23467999999999999999999999876543 1234445567899999999998887764 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||++||++. ++...+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 68889999999985 79999987
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 218 ~ 218 (369)
T PRK11000 218 P 218 (369)
T ss_pred H
Confidence 5
No 116
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.3e-36 Score=352.17 Aligned_cols=206 Identities=26% Similarity=0.382 Sum_probs=177.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1426)
..+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 46999999999999999999999999999999999999998 999999999875432 2467999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
|+||+.|.++..+... .+...+++.+++.+||.+.+++.++
T Consensus 97 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 137 (306)
T PRK13537 97 VRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVG----- 137 (306)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchh-----
Confidence 9999998655433110 0112245678999999988887765
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
+|||||||||+||+||+++|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|..+++.++||+|++|++|+
T Consensus 138 ~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 138 ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999854 3 4556667888899999999999999999
Q ss_pred EEEecChhhHHH
Q 000556 403 IVYQGPRELVLE 414 (1426)
Q Consensus 403 iv~~G~~~~~~~ 414 (1426)
+++.|+++++..
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999998754
No 117
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.8e-36 Score=355.64 Aligned_cols=203 Identities=25% Similarity=0.293 Sum_probs=178.8
Q ss_pred CceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcc---cc----cceEEEeccCCC
Q 000556 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE---TF----ARISGYCEQNDI 924 (1426)
Q Consensus 852 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~q~~~ 924 (1426)
+.+.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... .. ++.+|||+|+..
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 34569999999999999999999999999999999999876 3589999999886542 22 568999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEE
Q 000556 925 HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1004 (1426)
Q Consensus 925 ~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlL 1004 (1426)
++|.+||+||+.|..... ..+.+++.+++.++++.+||.+..++.+ ..|||||||||+|||||+.+|+||+|
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876543 2345566778999999999998888774 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1005 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1005 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
||||++||+.++..+++.++++.++ |+|||++||++. ++.+.+|++++|++ |+++..|+.
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~ 214 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTP 214 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCH
Confidence 9999999999999999999999754 899999999986 57899999999985 799999975
No 118
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=324.25 Aligned_cols=217 Identities=26% Similarity=0.335 Sum_probs=179.8
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.++.+|++..+.... ....+|+|||+++.+||++||+|+||||||||.++|+|...+ .+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCccc
Confidence 367888887775321 112599999999999999999999999999999999998764 589999999875
Q ss_pred Ccc----cccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCC
Q 000556 908 KQE----TFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGVSG 980 (1426)
Q Consensus 908 ~~~----~~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~ 980 (1426)
... .+.+.+-+|+|++. +.|..||++.|.-.... ...++.+ +++.++++.+||.+. .+.. +..
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcC-----chh
Confidence 543 36778999999985 56889999988644322 2233333 338999999999864 3333 457
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 981 LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
||||||||++|||||+.+|++|+||||||+||+..++.|+++|.++.++ |.|.|+++||.+ -+..+|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999865 889999999987 47899999999986 79
Q ss_pred EEEEcCCC
Q 000556 1060 EIYVGPLG 1067 (1426)
Q Consensus 1060 ~v~~G~~~ 1067 (1426)
++..+|.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999863
No 119
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=4.9e-36 Score=335.94 Aligned_cols=221 Identities=37% Similarity=0.610 Sum_probs=181.9
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCC-ceEEEEEEEcCccC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG-GYITGNITISGYPK 907 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~-~~~~G~i~i~g~~~ 907 (1426)
+.|+|+++.++... ..+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~~---------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNWN---------KYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecCc---------cccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 56888888774210 135799999999999999999999999999999999997641 23589999999876
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHH-HHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEE-VMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~-~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
.....++.++|++|++..++.+||+||+.|......+...........+++ .++.+++.+..++. ++.||+|||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 544456779999999999999999999998765433222222223334555 89999998777665 457999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998877999999999985468899999999986 7887765
No 120
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.7e-36 Score=309.25 Aligned_cols=200 Identities=27% Similarity=0.395 Sum_probs=175.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1426)
..+|+|||+.|++||++.|+||||||||||||+|.+...|+ +|+|.+||+++..... +|.+|.|+|+..++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 56999999999999999999999999999999999999998 9999999999875432 57899999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+..||.||++|+.+..|... .+.+.++.++|+..||.+.++.
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~---- 133 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARA---- 133 (223)
T ss_pred ccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhc----
Confidence 99999999999988765322 1245567889999999998874
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
.+..|||||+|||+||||++.+|++|+-||||.+||+.++.+|++.+.++.+ .+|+|+..+|+..-+-.+--+++.|
T Consensus 134 -lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 134 -LPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred -CccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEEEE
Confidence 4558999999999999999999999999999999999999999999999864 3666666788887777777899999
Q ss_pred cCCeEEEecC
Q 000556 399 SDGQIVYQGP 408 (1426)
Q Consensus 399 ~~G~iv~~G~ 408 (1426)
++|+++....
T Consensus 211 ~~Grl~~d~~ 220 (223)
T COG2884 211 EDGRLVRDES 220 (223)
T ss_pred eCCEEEeccc
Confidence 9999987643
No 121
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5.8e-36 Score=353.89 Aligned_cols=210 Identities=27% Similarity=0.401 Sum_probs=177.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1426)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.+++.+||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 45999999999999999999999999999999999999988 9999999998865443 3679999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.|+.+....... + ...+....++.+++.+||++..|..+ ..
T Consensus 92 ~eni~~~~~~~~~~~~-----------------~-------------~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRER-----------------P-------------NAAAIKAKVTQLLEMVQLAHLADRYP-----AQ 136 (353)
T ss_pred HHHHHhhhhhcccccC-----------------C-------------CHHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 9999997643210000 0 00112235678899999987776554 57
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+.+++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~g~tii~vTHd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEE-LKFTSVFVTHDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998753 345566688999999999999999999999
Q ss_pred EEecChhhHH
Q 000556 404 VYQGPRELVL 413 (1426)
Q Consensus 404 v~~G~~~~~~ 413 (1426)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 122
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=4.4e-36 Score=349.79 Aligned_cols=212 Identities=23% Similarity=0.357 Sum_probs=184.3
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|++.++. ++.+|+|+||++++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67888887763 3469999999999999999999999999999999999866 35899999998764
Q ss_pred cc--cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 909 QE--TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 909 ~~--~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
.. ..++.+||++|++.+++.+||.|++.+.+.++. .+.++..++++++++.+||.+..++.+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 32 245679999999999999999999998776542 233444556899999999999888774 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
||++||+||+++|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999865 799999999986 68899999999985 799999885
No 123
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.5e-36 Score=335.40 Aligned_cols=208 Identities=28% Similarity=0.398 Sum_probs=173.0
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|+++.++... ..+.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~~~---------~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 69 (218)
T cd03255 1 IELKNLSKTYGGGG---------EKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDIS 69 (218)
T ss_pred CeEeeeEEEecCCC---------cceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehh
Confidence 35778887763100 01469999999999999999999999999999999999865 34899999998764
Q ss_pred ccc-------ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000556 909 QET-------FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGL 981 (1426)
Q Consensus 909 ~~~-------~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 981 (1426)
... .++.++|++|++.+++.+||+|++.+....+. ......++.++++++.+||.+..++.+ ..|
T Consensus 70 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 141 (218)
T cd03255 70 KLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SEL 141 (218)
T ss_pred hcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhc
Confidence 311 24578999999999999999999998755431 223334556889999999988777664 579
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 982 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 982 SgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++ +.+|++++|++|
T Consensus 142 S~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~G 216 (218)
T cd03255 142 SGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRDG 216 (218)
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeCC
Confidence 99999999999999999999999999999999999999999999987 5899999999986 35 489999999864
No 124
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.9e-36 Score=358.58 Aligned_cols=218 Identities=26% Similarity=0.352 Sum_probs=185.0
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.+. ++.+|+|+||.+++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEc
Confidence 377889888763 3579999999999999999999999999999999999876 3589999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
.. ...++.+|||+|++.+++.+||+|++.+....+.. ........++.++++++.+++.+..++.+ +.|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 53 23467799999999988899999999875422110 01012334467899999999998888764 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~ 1063 (1426)
|||||+.|||+|+++|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999987 57899999999985 789999
Q ss_pred cCCC
Q 000556 1064 GPLG 1067 (1426)
Q Consensus 1064 G~~~ 1067 (1426)
|+..
T Consensus 221 G~~~ 224 (402)
T PRK09536 221 GPPA 224 (402)
T ss_pred cCHH
Confidence 9863
No 125
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4e-36 Score=332.39 Aligned_cols=206 Identities=29% Similarity=0.390 Sum_probs=175.3
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
+++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 5677777663 2469999999999999999999999999999999999865 358999999987643
Q ss_pred -ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000556 910 -ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1426)
Q Consensus 910 -~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 988 (1426)
...++.++|++|++.+++.+||+||+.+....+. . .++.++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHH
Confidence 2235578999999988889999999987654321 1 1345788999999988877764 5799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 989 l~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998877999999999986 57788999999985 6887654
No 126
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-36 Score=319.48 Aligned_cols=208 Identities=25% Similarity=0.381 Sum_probs=175.3
Q ss_pred ccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc----ceEEEecCCCCCC
Q 000556 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHDNHI 238 (1426)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1426)
...++|++||+.+++||+++|+||||+|||||||+|+|..++. +|+|.++|++++...++ +-++||||....|
T Consensus 14 G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF 90 (237)
T COG0410 14 GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIF 90 (237)
T ss_pred cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccch
Confidence 3467999999999999999999999999999999999999987 99999999999887764 4689999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhC-Cccccccccc
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LEVCADTMVG 317 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vG 317 (1426)
+.|||+|||..++..+.. .. . .....|.+.+.|= |.+..+..-|
T Consensus 91 ~~LTVeENL~~g~~~~~~-~~----------~------------------------~~~~~e~v~~lFP~Lker~~~~aG 135 (237)
T COG0410 91 PRLTVEENLLLGAYARRD-KE----------A------------------------QERDLEEVYELFPRLKERRNQRAG 135 (237)
T ss_pred hhCcHHHHHhhhhhcccc-cc----------c------------------------ccccHHHHHHHChhHHHHhcCccc
Confidence 999999999987643211 00 0 0001233444442 4445555555
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
.|||||||-++|||||+++|++|+|||||.||-|.-..+|.+.|+++.+. ++.+|+.+.|....+.+++|+.++
T Consensus 136 -----~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~iaDr~yv 209 (237)
T COG0410 136 -----TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALEIADRGYV 209 (237)
T ss_pred -----CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHHhhCEEEE
Confidence 59999999999999999999999999999999999999999999998754 456777799999999999999999
Q ss_pred ecCCeEEEecChhhHHH
Q 000556 398 LSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 398 L~~G~iv~~G~~~~~~~ 414 (1426)
|.+|+|++.|+.+++.+
T Consensus 210 le~Griv~~G~~~eL~~ 226 (237)
T COG0410 210 LENGRIVLSGTAAELLA 226 (237)
T ss_pred EeCCEEEEecCHHHHhc
Confidence 99999999999998763
No 127
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=4.8e-36 Score=336.44 Aligned_cols=213 Identities=23% Similarity=0.291 Sum_probs=177.3
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCC-----CCceEEEEEEEcC
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRK-----TGGYITGNITISG 904 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~-----~~~~~~G~i~i~g 904 (1426)
+++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|.. . +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 5677777653 236999999999999999999999999999999999986 4 4589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 979 (1426)
.+... ..+++.++|++|++.++ .+||+||+.+....+. .......+++++++++.+++.+..+..+. +.
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87542 22456789999998887 7999999988654331 11222234568899999999877666531 25
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|++. ++.+.+|++++|++ |+
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 217 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GR 217 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CE
Confidence 79999999999999999999999999999999999999999999999877 99999999986 57788999999985 78
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
+++.|+.
T Consensus 218 i~~~g~~ 224 (227)
T cd03260 218 LVEFGPT 224 (227)
T ss_pred EEEecCc
Confidence 9888875
No 128
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-36 Score=337.20 Aligned_cols=207 Identities=29% Similarity=0.374 Sum_probs=172.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1426)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 46999999999999999999999999999999999999987 9999999988765322 35699999999899
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+.+||+||+.++......... .+....++.+++.+||.+..++.+
T Consensus 90 ~~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (235)
T cd03261 90 DSLTVFENVAFPLREHTRLSE---------------------------------EEIREIVLEKLEAVGLRGAEDLYP-- 134 (235)
T ss_pred CCCcHHHHHHHHHhhccCCCH---------------------------------HHHHHHHHHHHHHcCCchhhcCCh--
Confidence 999999999886432100000 011224567889999987666555
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|
T Consensus 135 ---~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~vsH~~~~~~~~~d~v~~l 210 (235)
T cd03261 135 ---AELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKEL-GLTSIMVTHDLDTAFAIADRIAVL 210 (235)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhcCEEEEE
Confidence 4699999999999999999999999999999999999999999999986533 445555778888899999999999
Q ss_pred cCCeEEEecChhhHH
Q 000556 399 SDGQIVYQGPRELVL 413 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1426)
++|++++.|+.+++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (235)
T cd03261 211 YDGKIVAEGTPEELR 225 (235)
T ss_pred ECCeEEEecCHHHHc
Confidence 999999999987653
No 129
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-36 Score=336.93 Aligned_cols=217 Identities=24% Similarity=0.312 Sum_probs=181.5
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++.. .+.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERP--TSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 5678888776310 0012699999999999999999999999999999999998763 4799999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
.. ..++.++|++|++.+++.+|++||+.+....+. .......+.++++++.++|.+..+..+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCC
Confidence 31 124678999999999999999999988654331 233344556889999999988777763 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v 1061 (1426)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 57788999999985 7899
Q ss_pred EEcCC
Q 000556 1062 YVGPL 1066 (1426)
Q Consensus 1062 ~~G~~ 1066 (1426)
..|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 88864
No 130
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=5.9e-36 Score=332.61 Aligned_cols=206 Identities=25% Similarity=0.331 Sum_probs=174.5
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 56788887762 12369999999999999999999999999999999999865 34899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
.. .+++.++|++|++.+++.+|+.|++.+....+. ......++.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 31 235678999999988889999999988654321 223334567889999999987776663 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999986 577889999999864
No 131
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-36 Score=333.32 Aligned_cols=207 Identities=28% Similarity=0.402 Sum_probs=180.4
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCC----CCCccceEEEecCCC-CCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMG----EFVPERTAAYISQHD-NHIG 239 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 239 (1426)
..+|+|+|+.|++|+.++|+||||||||||+++|+|.+.|. +|+|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999998 899999998865 223367899999996 4567
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000556 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1426)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1426)
.-||.|.++|+.+..+... .+.+.+++.+++.+||.+.++.
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~r----- 134 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLDR----- 134 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhccC-----
Confidence 7899999999988766421 1234568889999999988774
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
.+..|||||||||+||.+|+.+|++++|||||+|||+..+.++++.++++... ++.++|.++|+.+.+.+++|++++|+
T Consensus 135 ~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 135 PPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred CccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 45579999999999999999999999999999999999999999999998764 44556668999999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 000556 400 DGQIVYQGPRELVLE 414 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1426)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877654
No 132
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4.5e-35 Score=368.41 Aligned_cols=217 Identities=28% Similarity=0.427 Sum_probs=182.3
Q ss_pred ccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEE
Q 000556 822 LPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNIT 901 (1426)
Q Consensus 822 ~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~ 901 (1426)
.|.....++|+||+|.|+. +...+|+|+|++|+|||.+||+|+||||||||+|+|+|... +.+|+|+
T Consensus 465 ~~~~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~ 531 (709)
T COG2274 465 LPKLQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRIL 531 (709)
T ss_pred ccccCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEE
Confidence 3445568999999999963 22369999999999999999999999999999999999877 4589999
Q ss_pred EcCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccc
Q 000556 902 ISGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-------LIQS 971 (1426)
Q Consensus 902 i~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~ 971 (1426)
+||+++.+ ..+|+.+|||+|++.++. -|++||+.++. | +.+. +.+.++++..|..+ -.++
T Consensus 532 ~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~----p-~~~~----e~i~~A~~~ag~~~fI~~lP~gy~t 601 (709)
T COG2274 532 LDGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN----P-EATD----EEIIEAAQLAGAHEFIENLPMGYDT 601 (709)
T ss_pred ECCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC----C-CCCH----HHHHHHHHHhCcHHHHHhccccccc
Confidence 99998654 467899999999998875 69999997642 2 2222 23555665555544 4466
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceE
Q 000556 972 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDEL 1051 (1426)
Q Consensus 972 ~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v 1051 (1426)
.+|.. ..+||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++. .|+|+|+++|+++ ..+.+|+|
T Consensus 602 ~v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrI 677 (709)
T COG2274 602 PVGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRI 677 (709)
T ss_pred ccccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEE
Confidence 67754 46899999999999999999999999999999999999999999999985 4799999999986 68999999
Q ss_pred EEEecCcEEEEEcCC
Q 000556 1052 FLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1052 ~ll~~gg~~v~~G~~ 1066 (1426)
++|++ |+++..|+.
T Consensus 678 iVl~~-Gkiv~~gs~ 691 (709)
T COG2274 678 IVLDQ-GKIVEQGSH 691 (709)
T ss_pred EEccC-CceeccCCH
Confidence 99985 899999986
No 133
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.3e-36 Score=305.23 Aligned_cols=201 Identities=25% Similarity=0.395 Sum_probs=173.2
Q ss_pred cceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHHHHHH
Q 000556 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1426)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1426)
..+..|++||++||+|||||||||||++|+|...|. +|+|.+||.+.....| +|-++.++|+..+|..+||++|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 467889999999999999999999999999999998 9999999999876665 578999999999999999999999
Q ss_pred HhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhH
Q 000556 249 FSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGE 328 (1426)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGq 328 (1426)
++.. ++-+ + ..+....++.++..+||..+.+...+ +|||||
T Consensus 94 LGl~---P~Lk------L-------------------------~a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGq 134 (231)
T COG3840 94 LGLS---PGLK------L-------------------------NAEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQ 134 (231)
T ss_pred ccCC---cccc------c-------------------------CHHHHHHHHHHHHHhChhhHhhhCcc-----ccCchH
Confidence 8753 1111 0 01123456788999999998886554 699999
Q ss_pred hhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecC
Q 000556 329 RKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1426)
Q Consensus 329 rqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~~G~ 408 (1426)
||||++||+|+++.+|++||||+|+||+.-+.+....+.+++...+.|+++ ++|..+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~Tllm-VTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLM-VTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEE-EeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999998766666665 5666688999999999999999999999
Q ss_pred hhhHH
Q 000556 409 RELVL 413 (1426)
Q Consensus 409 ~~~~~ 413 (1426)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 88764
No 134
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.1e-35 Score=336.43 Aligned_cols=214 Identities=22% Similarity=0.343 Sum_probs=181.2
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 56788887763 2469999999999999999999999999999999999865 35899999998764
Q ss_pred c-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 909 Q-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 909 ~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
. ...++.++|++|++..++.+||+|++.+...... .......++.+.++++.+||.+..+..+ ..||+
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCH
Confidence 3 1235678999999988889999999987542111 1233444567889999999988777663 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~ 1063 (1426)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999986 57788999999985 789998
Q ss_pred cCC
Q 000556 1064 GPL 1066 (1426)
Q Consensus 1064 G~~ 1066 (1426)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 875
No 135
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-36 Score=339.08 Aligned_cols=216 Identities=26% Similarity=0.308 Sum_probs=177.6
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
+++|+++.++. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYPN------------GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEP--TSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecCC------------ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEeccc
Confidence 56777766531 14699999999999999999999999999999999998653 47999999987643
Q ss_pred c------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000556 910 E------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRL-----PPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1426)
Q Consensus 910 ~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 978 (1426)
. ..++.++|++|++.+++.+||+||+.+...... ..........+.++++++.++|.+..++. +
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 142 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----A 142 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----c
Confidence 1 235678999999998899999999987532110 00111123345688899999998777665 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~- 220 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD- 220 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 899999999987 57779999999985
Q ss_pred cEEEEEcCC
Q 000556 1058 GQEIYVGPL 1066 (1426)
Q Consensus 1058 g~~v~~G~~ 1066 (1426)
|++++.|+.
T Consensus 221 G~i~~~~~~ 229 (241)
T cd03256 221 GRIVFDGPP 229 (241)
T ss_pred CEEEeecCH
Confidence 789988875
No 136
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=5.7e-36 Score=349.23 Aligned_cols=206 Identities=27% Similarity=0.374 Sum_probs=176.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1426)
+.+|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 56999999999999999999999999999999999999998 999999998875421 1356999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
|+||+.+.++..+... .+....++.+++.+||++..++.++
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVG----- 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchh-----
Confidence 9999998765433110 0112245778999999988876654
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
.|||||||||+||+||+++|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|...++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999864 3 4555667888899999999999999999
Q ss_pred EEEecChhhHHH
Q 000556 403 IVYQGPRELVLE 414 (1426)
Q Consensus 403 iv~~G~~~~~~~ 414 (1426)
+++.|+.+++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999988754
No 137
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-36 Score=342.69 Aligned_cols=203 Identities=25% Similarity=0.305 Sum_probs=173.9
Q ss_pred CceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcc---c----ccceEEEeccCCC
Q 000556 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDI 924 (1426)
Q Consensus 852 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~q~~~ 924 (1426)
+.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.... . .++.++|++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 456799999999999999999999999999999999998763 479999999875431 1 1356899999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEE
Q 000556 925 HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1004 (1426)
Q Consensus 925 ~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlL 1004 (1426)
+++.+||+||+.+..... ........+.++++++.++|.+..++.+ ..||||||||++||++|+.+|+||+|
T Consensus 113 ~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 888999999998865432 1223344566889999999998887774 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1005 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1005 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999998754 899999999986 57789999999985 788888874
No 138
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4e-36 Score=331.61 Aligned_cols=191 Identities=29% Similarity=0.378 Sum_probs=163.1
Q ss_pred eEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeccCCC-CCCCCCHH
Q 000556 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDI-HSPFVTVY 932 (1426)
Q Consensus 854 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~-~~~~lTv~ 932 (1426)
+.+|+|+||++++||+++|+|||||||||||++|+|... +.+|+|.++|.+......++.++|++|++. .+...|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 459999999999999999999999999999999999866 358999999987644344567999999974 33467999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCC
Q 000556 933 ESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1012 (1426)
Q Consensus 933 e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD 1012 (1426)
||+.+..... . . ..+.++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL---D--A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc---C--c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754322 1 1 1245789999999998877764 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEE
Q 000556 1013 ARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1426)
Q Consensus 1013 ~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~ 1060 (1426)
+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i 204 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAI 204 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999777999999999986 57778999999986 565
No 139
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=8.1e-36 Score=332.97 Aligned_cols=214 Identities=26% Similarity=0.393 Sum_probs=179.6
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++. +++.+|+|||+++++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (220)
T cd03263 1 LQIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIR 67 (220)
T ss_pred CEEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 356777776631 11469999999999999999999999999999999999865 35899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 909 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 909 ~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
. ..+++.++|++|++.+++..|++||+.+....+. .+.....+.++++++.++|.+..++.+ ..||+|||
T Consensus 68 ~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 139 (220)
T cd03263 68 TDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMK 139 (220)
T ss_pred cchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHH
Confidence 3 2345669999999988889999999988654432 223334456889999999988777764 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 140 RKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999999876 699999999986 57788999999985 788888864
No 140
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.1e-35 Score=342.46 Aligned_cols=206 Identities=20% Similarity=0.246 Sum_probs=154.1
Q ss_pred CCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcC
Q 000556 825 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG 904 (1426)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 904 (1426)
.|..+.+.+|.+.++. +..+++.+++..++.-...+++|+||+||||+++++.|..+ +..|-+-+.+
T Consensus 359 ~~p~l~i~~V~f~y~p-----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTP-----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCC-----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc
Confidence 3456888888877642 11268899999999999999999999999999999998655 3456665543
Q ss_pred ccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 905 YPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 905 ~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
+..++|-.|..+-+-.+.|.+ +.+-..++ |..+ ++.+++-+..+||..-.-. ..+.+||||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~-vd~~~~~~-pG~~-----~ee~r~hl~~~Gl~g~la~----~si~~LSGG 486 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNA-VDFMEKSF-PGKT-----EEEIRRHLGSFGLSGELAL----QSIASLSGG 486 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHH-HHHHHHhC-CCCC-----HHHHHHHHHhcCCCchhhh----ccccccCCc
Confidence 456788888755443444433 23333333 2222 2236677889999753221 125689999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
||-||.+|.....+|.+|+|||||+.||..+-..+-++|++. +..||+++|+.+. +-..|+++++.++|.-.-+.|
T Consensus 487 QKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ieg 562 (582)
T KOG0062|consen 487 QKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIEG 562 (582)
T ss_pred chhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeeec
Confidence 999999999999999999999999999999999999999876 5689999999764 778999999999754444445
Q ss_pred CC
Q 000556 1065 PL 1066 (1426)
Q Consensus 1065 ~~ 1066 (1426)
..
T Consensus 563 ~~ 564 (582)
T KOG0062|consen 563 GI 564 (582)
T ss_pred cH
Confidence 43
No 141
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=350.54 Aligned_cols=206 Identities=26% Similarity=0.364 Sum_probs=175.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1426)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 56999999999999999999999999999999999999988 9999999998765432 35799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+.+||+||+.+.....+... .+....++.+++.+||++..++.+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 138 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADRYP-- 138 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998754332110 011224567899999988777554
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++.++||+|++|
T Consensus 139 ---~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 139 ---AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINREL-GLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999986533 445555788888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000556 399 SDGQIVYQGPRELVL 413 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1426)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998774
No 142
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-36 Score=323.73 Aligned_cols=224 Identities=27% Similarity=0.385 Sum_probs=189.7
Q ss_pred CCcccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc----ceEEEecCCC
Q 000556 160 SRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHD 235 (1426)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d 235 (1426)
++-....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ .-++--+|..
T Consensus 12 k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~ 88 (250)
T COG0411 12 KRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQIT 88 (250)
T ss_pred eecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeecccc
Confidence 3445678999999999999999999999999999999999999998 99999999999888775 3467889999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 000556 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTM 315 (1426)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1426)
.+|++|||.||+..++..+.. +..... .|.. ..+..+...++..+|+.+||.+.+|+.
T Consensus 89 rlF~~lTVlENv~va~~~~~~---~~~~l~----------~~~~---------~~~e~~~~e~A~~~Le~vgL~~~a~~~ 146 (250)
T COG0411 89 RLFPGLTVLENVAVGAHARLG---LSGLLG----------RPRA---------RKEEREARERARELLEFVGLGELADRP 146 (250)
T ss_pred cccCCCcHHHHHHHHhhhhhh---hhhhhc----------cccc---------hhhHHHHHHHHHHHHHHcCCchhhcch
Confidence 999999999999998764421 000000 0000 001122345678899999999999988
Q ss_pred ccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 316 vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
.|+ ||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.|+++.+ .++++|+.+-|+..-++.+||+|
T Consensus 147 A~~-----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri 220 (250)
T COG0411 147 AGN-----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRI 220 (250)
T ss_pred hhc-----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEE
Confidence 874 999999999999999999999999999999999999999999999875 35577777999999999999999
Q ss_pred EEecCCeEEEecChhhHHH
Q 000556 396 ILLSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1426)
+||+.|+++.+|+++++.+
T Consensus 221 ~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 221 VVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred EeccCCcCcccCCHHHHhc
Confidence 9999999999999999864
No 143
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-36 Score=355.85 Aligned_cols=206 Identities=23% Similarity=0.315 Sum_probs=178.2
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1426)
..+|+|+|+.+++||+++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ ++.++||+|++.+|+.+||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 45899999999999999999999999999999999999998 9999999998865544 4689999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
.||+.|+.+.++... .+...+++++++.+||.+..+.. +++
T Consensus 109 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~l~L~~~~~~~-----~~~ 149 (377)
T PRK11607 109 EQNIAFGLKQDKLPK----------------------------------AEIASRVNEMLGLVHMQEFAKRK-----PHQ 149 (377)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhh
Confidence 999999865432110 01223567889999998776654 457
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
|||||||||+|||||+.+|++|+||||+++||..++..+.+.|+++.+..+ .+++.++|+..++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVG-VTCVMVTHDQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999988866444 5556688999999999999999999999
Q ss_pred EEecChhhHH
Q 000556 404 VYQGPRELVL 413 (1426)
Q Consensus 404 v~~G~~~~~~ 413 (1426)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 144
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=9.2e-36 Score=331.11 Aligned_cols=205 Identities=25% Similarity=0.354 Sum_probs=173.4
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
.++|+++.++ +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEccc
Confidence 4677777663 12469999999999999999999999999999999999865 348999999987643
Q ss_pred c------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 910 E------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 910 ~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
. ..++.++|++|++.+++.+|++||+.+....+. ...+..++.++++++.+++.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCH
Confidence 1 245679999999999999999999988654331 233344567889999999988777663 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++|
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~G 212 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALERG 212 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999777999999999986 567789999999863
No 145
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=344.40 Aligned_cols=218 Identities=20% Similarity=0.294 Sum_probs=180.8
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|+++.++... ...+.+|+||||+|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKP--TSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CccEEEECCEECC
Confidence 67889988874210 0113699999999999999999999999999999999998763 4899999998865
Q ss_pred cc-----cccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc--ccccccccCCCCCC
Q 000556 909 QE-----TFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK--PLIQSLVGLPGVSG 980 (1426)
Q Consensus 909 ~~-----~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~--~~~~~~vg~~~~~~ 980 (1426)
.. ..++.+|||+|++. .+...||+|++.|..... ..+.++..+.++++++.+||. +..++. ++.
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 31 34567999999863 233579999998865432 234555566789999999997 556655 468
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 981 LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 999999999986 57788999999986 79
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9998875
No 146
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=332.80 Aligned_cols=217 Identities=24% Similarity=0.312 Sum_probs=179.9
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++... ..+.+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~~~---------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEGS---------VQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCCC---------cceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 378899998874210 11469999999999999999999999999999999999865 3589999999876
Q ss_pred Cccc------c-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000556 908 KQET------F-ARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 980 (1426)
Q Consensus 908 ~~~~------~-~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 980 (1426)
.... . ++.++|++|++.+++.+|++||+.+....+ ....+..+++++++++.+||.+..++.+ ..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRP-----SE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 4321 1 256899999998889999999998865432 1223344567899999999988777653 57
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 981 LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++++ +|+|||+++|+++ ++ +.+|++++|++ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~-~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LA-KRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 5899999999986 34 45689999985 78
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
++..|+.
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9888875
No 147
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.4e-36 Score=318.63 Aligned_cols=202 Identities=24% Similarity=0.388 Sum_probs=186.3
Q ss_pred CceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCH
Q 000556 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTV 931 (1426)
Q Consensus 852 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv 931 (1426)
+++.+++|+||.++||++.|++|+|||||||++++|.|... +.+|.|.++|.+.++.. +.++||.|.+.-++|.+||
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~tv 89 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQEI-KNRIGYLPEERGLYPKMTV 89 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhhh-hhhcccChhhhccCccCcH
Confidence 56789999999999999999999999999999999999887 45899999999987643 4568999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000556 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1011 (1426)
Q Consensus 932 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgL 1011 (1426)
.|.|.|-|.++ .++.++..+.++.+|+.+++......+ ++.||.|++|++.+-.+++++|++++||||.|||
T Consensus 90 ~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~k-----Ik~LSKGnqQKIQfisaviHePeLlILDEPFSGL 161 (300)
T COG4152 90 EDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKK-----IKELSKGNQQKIQFISAVIHEPELLILDEPFSGL 161 (300)
T ss_pred HHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccch-----HHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCC
Confidence 99999999987 466777788899999999999988777 4689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1012 DARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1012 D~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
||.+.+.+.+.+.++++.|.|||+++|++. .+-++||++++|++ |+.|..|+.
T Consensus 162 DPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 162 DPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred ChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 999999999999999999999999999997 68999999999986 788888986
No 148
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.4e-35 Score=337.75 Aligned_cols=214 Identities=27% Similarity=0.362 Sum_probs=180.8
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.+. ++.+|+||||++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQP--EAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEcc
Confidence 67888887763 23699999999999999999999999999999999998653 4799999998754
Q ss_pred c-----------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000556 909 Q-----------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPG 977 (1426)
Q Consensus 909 ~-----------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 977 (1426)
. ...++.++|++|++.+++..|+.||+.+...... ....+...+.++++++.+||.+..++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 2 1234578999999988888999999987543211 123344456688999999998777665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 978 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 978 ~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 3579999999999999999999999999999999999999999999999877999999999986 57788999999985
Q ss_pred cEEEEEcCC
Q 000556 1058 GQEIYVGPL 1066 (1426)
Q Consensus 1058 g~~v~~G~~ 1066 (1426)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 788888874
No 149
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=336.42 Aligned_cols=213 Identities=27% Similarity=0.377 Sum_probs=179.3
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
.++|+++.++. .+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEP--TSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCeEcCc
Confidence 56777776631 14599999999999999999999999999999999998653 47999999987543
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHH
Q 000556 910 ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP--LIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 910 ---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~LSgG 984 (1426)
...++.++|++|++.+++.+||+||+.+....+ ..+.+...+.+.++++.+++.+ ..++. +..||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRY-----PHELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHH
Confidence 233557899999999999999999998865433 1233444566889999999985 55555 3579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEE
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~ 1063 (1426)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999765 899999999986 57789999999985 788888
Q ss_pred cCC
Q 000556 1064 GPL 1066 (1426)
Q Consensus 1064 G~~ 1066 (1426)
|+.
T Consensus 218 ~~~ 220 (242)
T cd03295 218 GTP 220 (242)
T ss_pred cCH
Confidence 874
No 150
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=336.08 Aligned_cols=212 Identities=26% Similarity=0.362 Sum_probs=179.0
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 56788887663 2469999999999999999999999999999999999865 34799999998764
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000556 909 QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1426)
Q Consensus 909 ~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 988 (1426)
. ..+.+||++|++.+++.+||.||+.+....+ ........+.++++++.++|.+..++.+ ..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHH
Confidence 3 2345799999998888899999998764432 1233344567899999999988777653 5799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEec-CcEEEEEcCC
Q 000556 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKR-GGQEIYVGPL 1066 (1426)
Q Consensus 989 l~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~~-gg~~v~~G~~ 1066 (1426)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|++. ++.+.+|++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999986 57889999999985 5888887654
No 151
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=354.05 Aligned_cols=206 Identities=26% Similarity=0.390 Sum_probs=176.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1426)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|+..+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999988 9999999998865433 4679999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.|+.+..+... .+....++++++.+||++..+..+ ..
T Consensus 93 ~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~lgL~~~~~~~~-----~~ 133 (369)
T PRK11000 93 AENMSFGLKLAGAKK----------------------------------EEINQRVNQVAEVLQLAHLLDRKP-----KA 133 (369)
T ss_pred HHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCCh-----hh
Confidence 999999765332110 011234677899999988777555 47
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++.+++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999986533 44555678888999999999999999999
Q ss_pred EEecChhhHH
Q 000556 404 VYQGPRELVL 413 (1426)
Q Consensus 404 v~~G~~~~~~ 413 (1426)
+..|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 152
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1e-35 Score=332.65 Aligned_cols=210 Identities=28% Similarity=0.405 Sum_probs=175.3
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
+++|+++.++ .+.+|+|+||++++||++||+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 66 (222)
T cd03224 2 EVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPP--RSGSIRFDGRDITG 66 (222)
T ss_pred EEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCC
Confidence 5677776652 24699999999999999999999999999999999998763 47999999987643
Q ss_pred cc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCHH
Q 000556 910 ET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELV-ELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 910 ~~----~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LSgG 984 (1426)
.. .++.++|++|++.+++.+|++||+.+....+. ....++.+.++++.+ ++.+..++. +..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G 136 (222)
T cd03224 67 LPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGG 136 (222)
T ss_pred CCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHH
Confidence 21 24568999999999999999999988654321 122334567788887 576666665 3579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 137 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 214 (222)
T cd03224 137 EQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEG 214 (222)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeC
Confidence 999999999999999999999999999999999999999999877899999999986 57788999999985 7888888
Q ss_pred CC
Q 000556 1065 PL 1066 (1426)
Q Consensus 1065 ~~ 1066 (1426)
+.
T Consensus 215 ~~ 216 (222)
T cd03224 215 TA 216 (222)
T ss_pred CH
Confidence 64
No 153
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=340.55 Aligned_cols=215 Identities=25% Similarity=0.326 Sum_probs=181.1
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
-++++|+++.++. ...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYKD------------GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLP--QRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeCC------------CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 3788999887731 23599999999999999999999999999999999998653 489999999876
Q ss_pred Ccc---cccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 908 KQE---TFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 908 ~~~---~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
... ..++.+||++|++. .++..||.||+.|..... ..+....++.++++++.++|.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 432 23457999999863 345689999998764322 2334444566899999999988877764 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~ 1063 (1426)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 46788999999985 789998
Q ss_pred cCC
Q 000556 1064 GPL 1066 (1426)
Q Consensus 1064 G~~ 1066 (1426)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 875
No 154
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=6.5e-36 Score=376.05 Aligned_cols=207 Identities=29% Similarity=0.428 Sum_probs=173.5
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1426)
.+|+|+|++|+|||.++|+|+||||||||+|+|+|+++|. +|+|.+||.++++..+ ++.++||+|++.+| +.|
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf-~gS 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLF-SGS 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhh-cCc
Confidence 5899999999999999999999999999999999999998 9999999999987765 58899999988665 469
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
++||+.++.. +.+.++.++|+...+. .+ .+..++..+||.||+.+.
T Consensus 563 I~eNi~l~~p-------------------------~~~~e~i~~A~~~ag~-----~~---fI~~lP~gy~t~v~E~G~- 608 (709)
T COG2274 563 IRENIALGNP-------------------------EATDEEIIEAAQLAGA-----HE---FIENLPMGYDTPVGEGGA- 608 (709)
T ss_pred HHHHHhcCCC-------------------------CCCHHHHHHHHHHhCc-----HH---HHHhcccccccccccCCC-
Confidence 9999998642 2222233333322221 11 244688999999997655
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
+||||||||++|||||+++|+||+||||||+||+.+...|.+.|.++. .++|+|+..|+ ..+.+.+|+|++|++|+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~IaHR--l~ti~~adrIiVl~~Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVIIIAHR--LSTIRSADRIIVLDQGK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEEEEcc--chHhhhccEEEEccCCc
Confidence 899999999999999999999999999999999999999999999875 35666664443 46889999999999999
Q ss_pred EEEecChhhHHH
Q 000556 403 IVYQGPRELVLE 414 (1426)
Q Consensus 403 iv~~G~~~~~~~ 414 (1426)
|+.+|+++++++
T Consensus 685 iv~~gs~~ell~ 696 (709)
T COG2274 685 IVEQGSHEELLA 696 (709)
T ss_pred eeccCCHHHHHH
Confidence 999999999876
No 155
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.6e-35 Score=338.42 Aligned_cols=215 Identities=20% Similarity=0.298 Sum_probs=181.6
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ ++.+|+||||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP--DHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEc
Confidence 478999988763 24699999999999999999999999999999999998653 489999999876
Q ss_pred Ccc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000556 908 KQE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGL 981 (1426)
Q Consensus 908 ~~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 981 (1426)
... ..++.++|++|+..+++.+||.||+.+...... ..+....++.+.++++.++|.+..+..+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 421 134568999999988899999999987543221 1223334456788999999988777764 579
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEE
Q 000556 982 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1426)
Q Consensus 982 SgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~ 1060 (1426)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999986 57788999999985 799
Q ss_pred EEEcCC
Q 000556 1061 IYVGPL 1066 (1426)
Q Consensus 1061 v~~G~~ 1066 (1426)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 998875
No 156
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=8.4e-36 Score=338.04 Aligned_cols=217 Identities=25% Similarity=0.274 Sum_probs=177.9
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.+. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhh
Confidence 46778877653 02459999999999999999999999999999999999865 34899999998754
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000556 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRL-----PPEVDSETRKMFIEEVMELVELKPLIQSLVGLPG 977 (1426)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 977 (1426)
.. .+++.++|++|++.+++.+||+||+.+...... .........+++++++++.++|.+..+..
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 142 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR----- 142 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----
Confidence 21 235679999999988899999999976421100 00011223345688999999998777765
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 978 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 978 ~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 3579999999999999999999999999999999999999999999998764 899999999986 47788999999985
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|++++.|+.
T Consensus 222 -G~i~~~~~~ 230 (243)
T TIGR02315 222 -GEIVFDGAP 230 (243)
T ss_pred -CEEEecCCH
Confidence 788888875
No 157
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-36 Score=308.64 Aligned_cols=207 Identities=30% Similarity=0.428 Sum_probs=175.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc---ceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE---RTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 241 (1426)
+.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|+|.+||++++++.+. +.-+..+|+..+-+..
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 45899999999999999999999999999999999999998 99999999999888764 4568999998887778
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
||+|-+.++..-.+.+.. ..+..++++..|...++.+.+.. ..
T Consensus 91 tv~eVV~mGr~p~~~g~~--------------------------------~~e~~~i~~~ala~~d~~~la~R-----~y 133 (259)
T COG4559 91 TVQEVVQMGRIPHRSGRE--------------------------------PEEDERIAAQALAATDLSGLAGR-----DY 133 (259)
T ss_pred EHHHHHHhcccccccCCC--------------------------------chhhHHHHHHHHHHcChhhhhcc-----ch
Confidence 999999998653321110 01233456778888888877753 34
Q ss_pred ccCChhHhhHHHHHHHHhc------CCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 322 RGISGGERKRVTTGEMMVG------PALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~------~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
+.|||||||||.+||.|+. ++++||||||||.||......+++..|++++. + ..|+.++|+.+-+..++|+|
T Consensus 134 ~~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDri 211 (259)
T COG4559 134 RTLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADRI 211 (259)
T ss_pred hhcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhhee
Confidence 5799999999999999975 44699999999999999999999999999974 3 55666889999999999999
Q ss_pred EEecCCeEEEecChhhHH
Q 000556 396 ILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1426)
++|++||++..|++++++
T Consensus 212 vll~~Grv~a~g~p~~vl 229 (259)
T COG4559 212 VLLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeeCCeEeecCCHHHhc
Confidence 999999999999999876
No 158
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=328.08 Aligned_cols=209 Identities=32% Similarity=0.477 Sum_probs=175.7
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ +..+|+|+||++++| +++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 64 (211)
T cd03264 1 LQLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPP--SSGTIRIDGQDVL 64 (211)
T ss_pred CEEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCCccc
Confidence 35677777663 246999999999999 9999999999999999999998663 4899999998754
Q ss_pred cc--cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 909 QE--TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 909 ~~--~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
.. ..++.++|++|++.+++.+||.|++.+....+. .+.++..+.++++++.++|.+..++.+ ..||||||
T Consensus 65 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 136 (211)
T cd03264 65 KQPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMR 136 (211)
T ss_pred cchHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHH
Confidence 32 235678999999999999999999988655431 222333556889999999988777664 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 137 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 137 RRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999999976 599999999986 46678999999986 6777654
No 159
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=311.96 Aligned_cols=212 Identities=23% Similarity=0.365 Sum_probs=181.9
Q ss_pred CcccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc----ceEEEecCCCC
Q 000556 161 RKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHDN 236 (1426)
Q Consensus 161 ~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~ 236 (1426)
+.+++++++|||+.|++||+++++|||||||||...++.|+..|+ +|+|.+||.+++.+... .-+||+||++.
T Consensus 13 ~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~S 89 (243)
T COG1137 13 SYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEAS 89 (243)
T ss_pred hhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccch
Confidence 335578999999999999999999999999999999999999999 99999999999877653 35799999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1426)
.|..+||+|||.-..+.+.... ...+.+...+.+|+.|+|.|+++..-
T Consensus 90 IFr~LtV~dNi~~vlE~~~~d~--------------------------------~~~~~~~~l~~LL~ef~i~hlr~~~a 137 (243)
T COG1137 90 IFRKLTVEDNIMAVLEIREKDL--------------------------------KKAERKEELDALLEEFHITHLRDSKA 137 (243)
T ss_pred HhhcCcHHHHHHHHHhhhhcch--------------------------------hHHHHHHHHHHHHHHhchHHHhcCcc
Confidence 9999999999987655432100 00122345788999999999998654
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
. .||||||+|+.|||||+.+|+.++||||++|+||-+..+|.+.++.+.. .+.-|+..-|...|+.+++||.+
T Consensus 138 ~-----sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~dRaY 210 (243)
T COG1137 138 Y-----SLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDICDRAY 210 (243)
T ss_pred c-----ccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhhheEE
Confidence 3 6999999999999999999999999999999999999999999999865 34445546788899999999999
Q ss_pred EecCCeEEEecChhhHHH
Q 000556 397 LLSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1426)
++++|++..+|+++++.+
T Consensus 211 Ii~~G~vla~G~p~ei~~ 228 (243)
T COG1137 211 IISDGKVLAEGSPEEIVN 228 (243)
T ss_pred EEecCeEEecCCHHHHhc
Confidence 999999999999998864
No 160
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.7e-35 Score=329.13 Aligned_cols=208 Identities=24% Similarity=0.316 Sum_probs=175.2
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 56788887762 12369999999999999999999999999999999999865 35899999998754
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
.. .+++.++|++|++.+++..|++||+.+....+ ....++..+.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCC
Confidence 31 13567899999998888899999998865433 1233344456889999999988777653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~ 1060 (1426)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|+++ ++.+.+|++++|++ |++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 215 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHL 215 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999777899999999986 57778999999986 554
No 161
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=342.58 Aligned_cols=218 Identities=25% Similarity=0.306 Sum_probs=179.9
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQP--TSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67899998884210 0113599999999999999999999999999999999998763 4799999998763
Q ss_pred c-------ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000556 909 Q-------ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 979 (1426)
Q Consensus 909 ~-------~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 979 (1426)
. ...++.+|||+|++. .+...||.||+.|..... ..+.++..++++++++.++|. +..++. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 2 134567999999863 233479999998875432 233444456789999999997 556665 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999765 999999999987 57889999999985 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999875
No 162
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=345.02 Aligned_cols=218 Identities=24% Similarity=0.347 Sum_probs=180.5
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.++++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p--~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKS--KYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCEEc
Confidence 489999999885210 0123599999999999999999999999999999999998763 479999999775
Q ss_pred Cc-------------------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc
Q 000556 908 KQ-------------------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK 966 (1426)
Q Consensus 908 ~~-------------------~~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~ 966 (1426)
.+ ...++.+|||+|++ .+++ .||+||+.|..... ..+.++..++++++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13456799999986 3554 59999998864322 223444456788999999996
Q ss_pred -ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHH
Q 000556 967 -PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIF 1045 (1426)
Q Consensus 967 -~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~ 1045 (1426)
+..+.. +..||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455554 4589999999999999999999999999999999999999999999999877999999999986 477
Q ss_pred hhcceEEEEecCcEEEEEcCC
Q 000556 1046 DAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1046 ~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
+.+|++++|++ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999986 799999875
No 163
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1e-35 Score=346.19 Aligned_cols=229 Identities=24% Similarity=0.364 Sum_probs=188.7
Q ss_pred cCCCCCccEEEEeceEEEEEEecCCCCCCChhHHHHHHHHHHHhhhccCCCCcccceEeecceEEEeCCeEEEEEcCCCC
Q 000556 110 VGIDLPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPAS 189 (1426)
Q Consensus 110 ~~~~~p~v~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GS 189 (1426)
..+..|.=.++|+|++.+-. ++++||+++||+|++||.+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCC
Confidence 46777888899999987742 224599999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHH
Q 000556 190 GKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTEL 266 (1426)
Q Consensus 190 GKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 266 (1426)
||||+|++|.+..+ . +|+|.+||.++++... |+.+|||||+..+| +.||.+||.++..- ..++.+.+.
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn~s----as~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGNPS----ASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCCCC----cCHHHHHHH
Confidence 99999999999998 5 8999999999987655 57899999976555 56999999998532 223445555
Q ss_pred HHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhHhhHHHHHHHHhcCCcEeE
Q 000556 267 ARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALF 346 (1426)
Q Consensus 267 ~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vll 346 (1426)
|++-.. .| -...|++.++|.||+++.. |||||||||++|||++.+|+|++
T Consensus 461 ~k~a~~--------------------------hd---~i~~l~~GY~T~VGerG~~-LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRAGL--------------------------HD---VISRLPDGYQTLVGERGLM-LSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHcCc--------------------------HH---HHHhccccchhhHhhcccc-cccchHHHHHHHHHHhcCCCeEE
Confidence 544211 11 1346889999999998874 99999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecChhhHHH
Q 000556 347 MDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 347 LDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~ 414 (1426)
+|||||.||+.|..++++.+.... .++|+|+. .|.. .+..-||+|++|++|++...|++++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~~--~~rTvI~I-vH~l-~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDVM--SGRTVIMI-VHRL-DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHhc--CCCeEEEE-Eecc-hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 999999999999999999998843 45666664 4543 5678899999999999999999999875
No 164
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2e-35 Score=328.19 Aligned_cols=205 Identities=24% Similarity=0.352 Sum_probs=173.3
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
.++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCc
Confidence 5677877763 2469999999999999999999999999999999999865 347999999987632
Q ss_pred -----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 910 -----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 910 -----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
...++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHH
Confidence 2245679999999998899999999987642111 1223344566889999999988777763 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++|
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~g 211 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDDG 211 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877999999999986 577889999999863
No 165
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=343.00 Aligned_cols=218 Identities=23% Similarity=0.311 Sum_probs=180.1
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 67899998884210 0113599999999999999999999999999999999998764 4799999986531
Q ss_pred ---------------------------cccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Q 000556 909 ---------------------------QETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVM 960 (1426)
Q Consensus 909 ---------------------------~~~~~~~~gyv~q~~-~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l 960 (1426)
....++.+|||+|++ ..+...||+|++.|..... ..+.++.++++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 112456799999985 2334579999998865432 234455566789999
Q ss_pred HHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000556 961 ELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1039 (1426)
Q Consensus 961 ~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq 1039 (1426)
+.+||. +..++. +..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566665 35799999999999999999999999999999999999999999999998779999999999
Q ss_pred CCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1040 PGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1040 ~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
+. ++.+.+|++++|++ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 86 57789999999985 789999885
No 166
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=341.32 Aligned_cols=217 Identities=26% Similarity=0.351 Sum_probs=180.4
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQP--TEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67899998884210 0113599999999999999999999999999999999998763 4899999998864
Q ss_pred c-------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000556 909 Q-------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 978 (1426)
Q Consensus 909 ~-------~~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 978 (1426)
. ..+++.+|||+|++ .+++ .||.|++.|..... ..+.++.++++.++++.++|. +..+.. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 12456799999986 3444 69999999875432 234455566789999999996 455554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 689999999999999999999999999999999999999999999999877999999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
++++.|+.
T Consensus 221 ~i~~~g~~ 228 (288)
T PRK13643 221 HIISCGTP 228 (288)
T ss_pred EEEEECCH
Confidence 99999985
No 167
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-35 Score=333.24 Aligned_cols=214 Identities=27% Similarity=0.359 Sum_probs=180.9
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67788887763 2469999999999999999999999999999999999865 34799999998764
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 909 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 909 ~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
.. ..++.++|++|++.+++.+||.||+.+....+. ..+.++.+..++++++.+++.+..+.. .+.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 31 134568999999988888999999987543321 122334456788999999998776665 3579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
||||++||++|+.+|++|+|||||+|||+.++..+.+.+++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999986 58889999999985 7898888
Q ss_pred CC
Q 000556 1065 PL 1066 (1426)
Q Consensus 1065 ~~ 1066 (1426)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 75
No 168
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.1e-35 Score=347.37 Aligned_cols=206 Identities=25% Similarity=0.372 Sum_probs=176.3
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1426)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 45999999999999999999999999999999999999998 999999999875432 2467999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
|+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 131 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~~----- 171 (340)
T PRK13536 131 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADARVS----- 171 (340)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCCChh-----
Confidence 9999987554332100 0011235667899999988887765
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
+|||||||||+||+||+++|++++|||||+|||+.++.++.+.|+++.. . +++|+.++|..+++.++||+|++|++|+
T Consensus 172 ~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 172 DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999864 3 4455557888999999999999999999
Q ss_pred EEEecChhhHHH
Q 000556 403 IVYQGPRELVLE 414 (1426)
Q Consensus 403 iv~~G~~~~~~~ 414 (1426)
++++|+.+++.+
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999998764
No 169
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-35 Score=314.04 Aligned_cols=212 Identities=26% Similarity=0.379 Sum_probs=179.4
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|++..| ++.++|+|||+++++||+++|+|+|||||||||++|+|..+. .+|+|.++|.++.
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecC
Confidence 5677776555 456899999999999999999999999999999999998763 4799999999876
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCH
Q 000556 909 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELV-ELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 909 ~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LSg 983 (1426)
.. ..++-++||||....||.+||+|||..++..+.. ++..+..++++.+.+ .|.+.++++.| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 53 2456789999999999999999999987655422 112222267777777 47777777754 6999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
||||.++|||||+++|++|+|||||.||-|.-...|.++|+++.++ |.||+.+-++.. ...+.+||.++|.+ |++++
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~ 217 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVL 217 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999866 779999998876 47789999999985 89999
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
.|+.
T Consensus 218 ~G~~ 221 (237)
T COG0410 218 SGTA 221 (237)
T ss_pred ecCH
Confidence 9985
No 170
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.8e-35 Score=330.59 Aligned_cols=217 Identities=24% Similarity=0.294 Sum_probs=172.9
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.+.... ....+|+|+|+++++||++||+|||||||||||++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~~---------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTGG---------GSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCCC---------cceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 56788887763110 01269999999999999999999999999999999999865 34799999998764
Q ss_pred c------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000556 909 Q------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 979 (1426)
Q Consensus 909 ~------~~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 979 (1426)
. ..+++.++|++|++ .+.+.+||+||+.+......+. ...+..+..++++++.+++. +..+.. +.
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PH 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----ch
Confidence 3 13456799999998 4567899999998765433211 11111122236889999995 455655 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999876 899999999986 56678999999985 6
Q ss_pred EEEEEc
Q 000556 1059 QEIYVG 1064 (1426)
Q Consensus 1059 ~~v~~G 1064 (1426)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 777654
No 171
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=4.4e-35 Score=332.80 Aligned_cols=214 Identities=24% Similarity=0.322 Sum_probs=178.2
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISGY 905 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 905 (1426)
+.++|+++.++ +..+|+|+|++|++||+++|+|+||||||||+++|+|...+. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 56788887763 235999999999999999999999999999999999986532 12799999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000556 906 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK----PLIQSLVGLP 976 (1426)
Q Consensus 906 ~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~~ 976 (1426)
+... ...++.++|++|++.+++ .|++||+.+....+. ..+..+.++.++++++.+||. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7643 123567999999998888 999999988654331 122344456688999999997 545544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 458999999999999999999999999999999999999999999999976 499999999986 57788999999986
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 788888874
No 172
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.9e-35 Score=334.28 Aligned_cols=215 Identities=20% Similarity=0.272 Sum_probs=181.1
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEc
Confidence 478999988773 24699999999999999999999999999999999998653 479999999865
Q ss_pred Cc----------------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-c
Q 000556 908 KQ----------------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-Q 970 (1426)
Q Consensus 908 ~~----------------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-~ 970 (1426)
.. ..+++.++|++|++.+++.+||+||+.+...... .......++++.++++.+|+.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 1235678999999999999999999987542111 123344556788999999998753 4
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcce
Q 000556 971 SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDE 1050 (1426)
Q Consensus 971 ~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~ 1050 (1426)
.. ...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 43 4689999999999999999999999999999999999999999999999877999999999986 57778999
Q ss_pred EEEEecCcEEEEEcCC
Q 000556 1051 LFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1051 v~ll~~gg~~v~~G~~ 1066 (1426)
+++|++ |++++.|+.
T Consensus 222 i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999986 789988874
No 173
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-35 Score=317.83 Aligned_cols=207 Identities=27% Similarity=0.387 Sum_probs=180.6
Q ss_pred CceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCccc----ccceEEEeccCCCCCC
Q 000556 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQET----FARISGYCEQNDIHSP 927 (1426)
Q Consensus 852 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~q~~~~~~ 927 (1426)
+...+++|||+++++||++||+||||||||||+|+|+|...+ .+|+|.++|.++.... .+.-++.-+|...+++
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 567899999999999999999999999999999999998774 4899999999876532 2445788899999999
Q ss_pred CCCHHHHHHHHHHhcC--------CCC-CCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000556 928 FVTVYESLLYSAWLRL--------PPE-VDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVAN 998 (1426)
Q Consensus 928 ~lTv~e~l~f~a~lr~--------~~~-~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~ 998 (1426)
.+||.||+..++..+. +.. ...++..++..++|+.+||.+.+|...| +||+||||||.|||||+.+
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 9999999998755331 111 1234556678899999999999999865 6999999999999999999
Q ss_pred CCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCC
Q 000556 999 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1426)
Q Consensus 999 p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~ 1067 (1426)
|++|+||||.+||.+.....+.+.|+++.++ |.||+++-|+++. ++.+||||+||+. |+++..|++.
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCHH
Confidence 9999999999999999999999999999874 7999999999984 8999999999986 7999999863
No 174
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.7e-35 Score=328.71 Aligned_cols=199 Identities=26% Similarity=0.420 Sum_probs=164.6
Q ss_pred eEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCC--CCCCH
Q 000556 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHS--PFVTV 931 (1426)
Q Consensus 854 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~--~~lTv 931 (1426)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.. ..++.++|++|++.+. ...||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKP--TSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 4699999999999999999999999999999999998653 4799999998654 2456789999998763 33799
Q ss_pred HHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCC
Q 000556 932 YESLLYSAWLRLPP-EVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1010 (1426)
Q Consensus 932 ~e~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsg 1010 (1426)
+||+.+....+... ....+..++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 99998754321100 0112233456889999999988777664 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 1011 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 1011 LD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999877999999999986 57788999999975 4 55544
No 175
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-35 Score=327.05 Aligned_cols=200 Identities=29% Similarity=0.430 Sum_probs=167.3
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1426)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 46999999999999999999999999999999999999987 9999999988754332 3579999999888999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.++....+... .+....++.+++.+||++..++.+ ..
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (213)
T cd03259 90 AENIAFGLKLRGVPK----------------------------------AEIRARVRELLELVGLEGLLNRYP-----HE 130 (213)
T ss_pred HHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhcCh-----hh
Confidence 999988643221100 001123567789999987766554 46
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQREL-GITTIYVTHDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999986533 44555578888889999999999999999
Q ss_pred EEec
Q 000556 404 VYQG 407 (1426)
Q Consensus 404 v~~G 407 (1426)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 176
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-35 Score=339.31 Aligned_cols=215 Identities=26% Similarity=0.379 Sum_probs=181.5
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
-+.++|+++.++ +++.+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 488999998873 12359999999999999999999999999999999999866 3589999999876
Q ss_pred Cc-----ccccceEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000556 908 KQ-----ETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGL 981 (1426)
Q Consensus 908 ~~-----~~~~~~~gyv~q~~~~-~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 981 (1426)
.. ..+++.+||++|++.. +...||+|++.+..... ..+.+...+.++++++.+||.+..++. ++.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 31 2345679999999742 34579999998764322 223444456789999999999877776 4579
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEE
Q 000556 982 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1426)
Q Consensus 982 SgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~ 1060 (1426)
|||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 899999999986 46678999999986 789
Q ss_pred EEEcCC
Q 000556 1061 IYVGPL 1066 (1426)
Q Consensus 1061 v~~G~~ 1066 (1426)
++.|+.
T Consensus 221 ~~~g~~ 226 (283)
T PRK13636 221 ILQGNP 226 (283)
T ss_pred EEeCCH
Confidence 999985
No 177
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2e-35 Score=327.57 Aligned_cols=193 Identities=25% Similarity=0.366 Sum_probs=163.7
Q ss_pred eEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc---ccccceEEEeccCCC-CCCCC
Q 000556 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDI-HSPFV 929 (1426)
Q Consensus 854 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~-~~~~l 929 (1426)
+.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 469999999999999999999999999999999999865 347999999987543 224567899999974 35678
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCC
Q 000556 930 TVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1009 (1426)
Q Consensus 930 Tv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTs 1009 (1426)
|++||+.+....+ .......++.++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998764332 1223334456889999999987777663 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 1010 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 1010 gLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999986 577789999999864
No 178
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-35 Score=327.44 Aligned_cols=205 Identities=29% Similarity=0.386 Sum_probs=172.1
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1426)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 46999999999999999999999999999999999999887 999999998764321 1356899999998999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
|+||+.+.....+... .+....++.+++.+||++..++.+ +
T Consensus 90 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (220)
T cd03265 90 GWENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLV-----K 130 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCh-----h
Confidence 9999998654322100 011224577899999987777655 4
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.+++|+|++|++|+
T Consensus 131 ~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 131 TYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEF-GMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999986532 4455667888889999999999999999
Q ss_pred EEEecChhhH
Q 000556 403 IVYQGPRELV 412 (1426)
Q Consensus 403 iv~~G~~~~~ 412 (1426)
+++.|+.+++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999987653
No 179
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=340.23 Aligned_cols=217 Identities=21% Similarity=0.328 Sum_probs=179.9
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKP--TTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67899998884210 0123599999999999999999999999999999999998763 4799999998764
Q ss_pred c-------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000556 909 Q-------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 978 (1426)
Q Consensus 909 ~-------~~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 978 (1426)
. ...++.+|||+|++ .+++ .||.||+.|..... ..+.++.+++++++++.+||. +..++. +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----P 143 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 13456799999986 3444 59999998865332 233445566789999999996 566655 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ .|+|||+++|++. ++.+.+|++++|++
T Consensus 144 ~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~- 221 (286)
T PRK13646 144 FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE- 221 (286)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 68999999999999999999999999999999999999999999999976 4899999999986 57789999999985
Q ss_pred cEEEEEcCC
Q 000556 1058 GQEIYVGPL 1066 (1426)
Q Consensus 1058 g~~v~~G~~ 1066 (1426)
|++++.|+.
T Consensus 222 G~i~~~g~~ 230 (286)
T PRK13646 222 GSIVSQTSP 230 (286)
T ss_pred CEEEEECCH
Confidence 799998875
No 180
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4.6e-35 Score=327.17 Aligned_cols=211 Identities=25% Similarity=0.332 Sum_probs=173.1
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++.. .+.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNP--TSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhh
Confidence 5678888776421 0124699999999999999999999999999999999998663 4899999998764
Q ss_pred ccc------cc-ceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000556 909 QET------FA-RISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGL 981 (1426)
Q Consensus 909 ~~~------~~-~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 981 (1426)
... ++ +.++|++|++.+++.+|++|++.+....+. .......+.+.++++.+|+.+..++.+ ..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 311 12 568999999988889999999988654331 222333456789999999988777663 579
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEE
Q 000556 982 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1426)
Q Consensus 982 SgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~ 1060 (1426)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++ +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999999764 899999999986 34 55799999986 565
Q ss_pred E
Q 000556 1061 I 1061 (1426)
Q Consensus 1061 v 1061 (1426)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 3
No 181
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=338.27 Aligned_cols=218 Identities=25% Similarity=0.387 Sum_probs=177.1
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-----ccceEEEecCCCC-CC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDN-HI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 238 (1426)
+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999998 999999999886532 2357999999863 44
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc--ccccccc
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE--VCADTMV 316 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 316 (1426)
..+||+||+.|+....+.. ..+....++++++.+||+ +..|+
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~-- 140 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------------------------------EEEIENRVKRAMNIVGLDYEDYKDK-- 140 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhccC--
Confidence 5689999999865332210 011223467789999997 44554
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
.++.||||||||++||+||+.+|++|+|||||+|||+.++.++.+.|+++++. .+++|+.++|+..++.++||+|+
T Consensus 141 ---~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 141 ---SPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred ---CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 34579999999999999999999999999999999999999999999998653 34556667888889999999999
Q ss_pred EecCCeEEEecChhhHHH---HHHhcCCCCCC
Q 000556 397 LLSDGQIVYQGPRELVLE---FFESMGFKCPK 425 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~F~~~Gf~cp~ 425 (1426)
+|++|+++++|+.+++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988743 23344555543
No 182
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-35 Score=333.21 Aligned_cols=206 Identities=21% Similarity=0.277 Sum_probs=176.6
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p--~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETP--SAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEH
Confidence 489999998873 23599999999999999999999999999999999998653 479999999765
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000556 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 987 (1426)
. ..++.++|++|++.+++.+||+||+.+... . ..++.++++++.++|.+..+..+ ..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHH
Confidence 3 235678999999988888999999987421 0 12345788999999988777663 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 988 Rl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999986 57788999999986 788887764
No 183
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-35 Score=338.77 Aligned_cols=216 Identities=23% Similarity=0.303 Sum_probs=182.1
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.++++|+++.++.. ..+.+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEA--ESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 37889999887421 123599999999999999999999999999999999998763 489999999886
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 908 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
.. ...++.+||++|++. .++..||+||+.|..... ..+.++.+++++++++.+||.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567999999973 567789999998865432 2344455567899999999998877764 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++ ..+|++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 999999999986 35 67999999985 79998
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 8875
No 184
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-35 Score=335.78 Aligned_cols=208 Identities=25% Similarity=0.336 Sum_probs=174.6
Q ss_pred ccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCC
Q 000556 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHD 235 (1426)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1426)
....+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 4567999999999999999999999999999999999999987 9999999988754321 24699999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 000556 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTM 315 (1426)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1426)
.+++.+||+||+.++....+... .+....++++++.+||.+..++.
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 157 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQGVPR----------------------------------AEREERAAEALELVGLEGWEHKY 157 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCC
Confidence 88989999999998654322100 00112356788999998777766
Q ss_pred ccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 316 vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
++ .|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++++..+ .+|+.++|+.+++.+++|+|
T Consensus 158 ~~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiii~tH~~~~~~~~~d~v 231 (269)
T cd03294 158 PD-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQ-KTIVFITHDLDEALRLGDRI 231 (269)
T ss_pred cc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcCEE
Confidence 54 6999999999999999999999999999999999999999999999865334 45555778888899999999
Q ss_pred EEecCCeEEEecChhhHH
Q 000556 396 ILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1426)
++|++|++++.|+.+++.
T Consensus 232 ~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 232 AIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 185
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7.8e-35 Score=328.45 Aligned_cols=212 Identities=26% Similarity=0.395 Sum_probs=177.3
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVA--QEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcc
Confidence 46778877663 24699999999999999999999999999999999998653 4899999998754
Q ss_pred cc--cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 909 QE--TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 909 ~~--~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
.. ...+.++|++|++.+++.+|++|++.+....+ ........+.++++++.+||.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 31 22346899999998888999999998765433 1223334456889999999988777664 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|++. ++ ..+|++++|++ |+++..|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999975 5899999999986 35 45999999985 78888876
Q ss_pred C
Q 000556 1066 L 1066 (1426)
Q Consensus 1066 ~ 1066 (1426)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 4
No 186
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=330.81 Aligned_cols=212 Identities=22% Similarity=0.321 Sum_probs=177.9
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
-+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRA--TSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEec
Confidence 378899988763 24699999999999999999999999999999999998653 479999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCC
Q 000556 908 KQE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELV-ELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 908 ~~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LS 982 (1426)
... ..++.++|++|+..+++.+||.||+.+..... .....++.++++++.+ ++.+..+.. ...||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 432 13457999999998899899999998754221 1122334567788887 476655554 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999877999999999986 58899999999986 79999
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 9875
No 187
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=6.9e-35 Score=332.19 Aligned_cols=214 Identities=23% Similarity=0.311 Sum_probs=180.3
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|+++.+. .+.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPI--DEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 35788887763 24699999999999999999999999999999999998663 4899999998753
Q ss_pred c----------------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc
Q 000556 909 Q----------------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSL 972 (1426)
Q Consensus 909 ~----------------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~ 972 (1426)
. ...++.++|++|++.+++..|+.||+.+..... ........++.++++++.+++.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 2 123567999999999999999999998753211 1123344456788999999998877765
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceE
Q 000556 973 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDEL 1051 (1426)
Q Consensus 973 vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v 1051 (1426)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++...+|++
T Consensus 144 -----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 -----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred -----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998765 899999999986 577889999
Q ss_pred EEEecCcEEEEEcCC
Q 000556 1052 FLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1052 ~ll~~gg~~v~~G~~ 1066 (1426)
++|++ |+++..|+.
T Consensus 218 ~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 218 CFFDK-GRIVEQGKP 231 (252)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 789888874
No 188
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=9.9e-35 Score=324.82 Aligned_cols=208 Identities=24% Similarity=0.327 Sum_probs=177.3
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccc
Confidence 4677776653 2469999999999999999999999999999999999865 358999999987643
Q ss_pred ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000556 910 ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRL 989 (1426)
Q Consensus 910 ~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl 989 (1426)
.. .+.++|++|++.+++.+|++||+.+....+. .+ +..+.++++.+++.+..+..+ ..||+|||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHH
Confidence 22 2468999999988888999999987654331 11 234788999999998777763 57999999999
Q ss_pred HHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCC
Q 000556 990 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1426)
Q Consensus 990 ~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~ 1067 (1426)
+||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|+..
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999999999999999999999999999877999999999986 57789999999985 7899998864
No 189
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-35 Score=330.08 Aligned_cols=213 Identities=24% Similarity=0.326 Sum_probs=179.4
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 67888887763 2359999999999999999999999999999999999865 35799999998652
Q ss_pred ------c---ccccceEEEeccCCCCCCCCCHHHHHHHH-HHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000556 909 ------Q---ETFARISGYCEQNDIHSPFVTVYESLLYS-AWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1426)
Q Consensus 909 ------~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~-a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 978 (1426)
. ...++.++|++|++.+++.+|+.||+.+. .... .....+..+.+.++++.+|+.+..++.+
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP----- 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 0 12345789999999999999999999753 2221 1223334456889999999988777764
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999986 56788999999985 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 89988875
No 190
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=335.87 Aligned_cols=224 Identities=26% Similarity=0.374 Sum_probs=180.5
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-------ccceEEEecCCC-CC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHD-NH 237 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d-~~ 237 (1426)
.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.++.... .++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999988 999999999875211 135799999986 24
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-ccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTMV 316 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1426)
+...||.||+.|+....+... .+...++.++++.+||. +..++
T Consensus 97 l~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~-- 140 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIPK----------------------------------EKAEKIAAEKLEMVGLADEFWEK-- 140 (288)
T ss_pred cccchHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhccC--
Confidence 445799999998764332100 01123456788999996 34443
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
.++.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|+.++|+..++.+++|+|+
T Consensus 141 ---~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 141 ---SPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-S-GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred ---CcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 4457999999999999999999999999999999999999999999998764 3 4456667888889999999999
Q ss_pred EecCCeEEEecChhhHH---HHHHhcCCCCCCCCChhHHH
Q 000556 397 LLSDGQIVYQGPRELVL---EFFESMGFKCPKRKGVADFL 433 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~~---~~F~~~Gf~cp~~~~~adfl 433 (1426)
+|++|+++++|+++++. ++++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999999874 34556777777655544443
No 191
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-35 Score=329.70 Aligned_cols=210 Identities=28% Similarity=0.386 Sum_probs=172.3
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1426)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 45999999999999999999999999999999999999887 9999999988754332 3579999999988889999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.++....+...+. + ..+....++.+++.+||++..++.+ ..
T Consensus 92 ~e~l~~~~~~~~~~~~~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (239)
T cd03296 92 FDNVAFGLRVKPRSERP-------------------P-----------EAEIRAKVHELLKLVQLDWLADRYP-----AQ 136 (239)
T ss_pred HHHHhhhhhhccccccC-------------------C-----------HHHHHHHHHHHHHHcCChhhhhcCh-----hh
Confidence 99999865432110000 0 0001123567889999987666554 46
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.| |+.++|+..++.+.+|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~t-vii~sH~~~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVT-TVFVTHDQEEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHhCCEEEEEECCeE
Confidence 99999999999999999999999999999999999999999999986533444 55577777888999999999999999
Q ss_pred EEecChhhHH
Q 000556 404 VYQGPRELVL 413 (1426)
Q Consensus 404 v~~G~~~~~~ 413 (1426)
++.|+.+++.
T Consensus 216 ~~~~~~~~~~ 225 (239)
T cd03296 216 EQVGTPDEVY 225 (239)
T ss_pred EEecCHHHHh
Confidence 9999988763
No 192
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=336.41 Aligned_cols=213 Identities=22% Similarity=0.304 Sum_probs=179.1
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|+++.++ +++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 56788887763 12359999999999999999999999999999999999866 35899999998764
Q ss_pred c----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 909 Q----ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 909 ~----~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
. ...++.+||++|++. .+...|+.||+.|..... ..+....++.++++++.++|.+..++.+ ..||+
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 3 223567999999975 356689999998765432 2234444567899999999998877764 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~ 1063 (1426)
|||||++||+||+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|++. ++ ..+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 45 67999999986 789999
Q ss_pred cCC
Q 000556 1064 GPL 1066 (1426)
Q Consensus 1064 G~~ 1066 (1426)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 885
No 193
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-35 Score=337.68 Aligned_cols=219 Identities=24% Similarity=0.307 Sum_probs=179.8
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.+.... ...+.+|+|||+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKP--SSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 367888888774110 0013599999999999999999999999999999999998763 589999999875
Q ss_pred Cc-------ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000556 908 KQ-------ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 978 (1426)
Q Consensus 908 ~~-------~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 978 (1426)
.. ...++.+||++|++. .+..+||.|++.|....+ ....++..++++++++.+||. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~----- 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSP----- 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCc-----
Confidence 32 123457899999963 233579999998765432 223444556789999999997 5666663
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|++. ++.+.+|++++|++ |
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999986 57889999999985 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13641 222 KLIKHASP 229 (287)
T ss_pred EEEEeCCH
Confidence 89988874
No 194
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-35 Score=331.43 Aligned_cols=215 Identities=22% Similarity=0.247 Sum_probs=177.2
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 904 (1426)
.+.++|+++.++ ++.+|+|||+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 588999988773 235999999999999999999999999999999999976532 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK----PLIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 975 (1426)
.++.. ...++.++|++|++..++ .||+||+.+....+. .......++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87532 124567999999988775 899999988654321 112333456688899999884 334443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
++.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++ +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46899999999999999999999999999999999999999999999996 4799999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 789988874
No 195
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=9.6e-35 Score=340.98 Aligned_cols=229 Identities=21% Similarity=0.244 Sum_probs=184.9
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
-++++|++.+++............+...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 488999988775321000000001235699999999999999999999999999999999998763 489999999886
Q ss_pred Ccc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000556 908 KQE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 978 (1426)
Q Consensus 908 ~~~------~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 978 (1426)
... .+++.++||+|++ .++|.+||.|++.+......+ ..+.++.++.+.++++.++|. +..++. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 432 2356799999997 578899999999886543221 234555667788999999995 355554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
..||||||||++||+||+.+|++|++||||+|||..++..+++.|+++.++ |.|||++||++. .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999765 999999999986 47788999999985
Q ss_pred cEEEEEcCC
Q 000556 1058 GQEIYVGPL 1066 (1426)
Q Consensus 1058 g~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 799999985
No 196
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=331.47 Aligned_cols=214 Identities=24% Similarity=0.297 Sum_probs=177.5
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 904 (1426)
.++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 588999988763 245999999999999999999999999999999999976531 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 975 (1426)
.++.. ..+++.++|++|++.+++ .|++||+.+....+ ..+.+..++.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 124567999999988887 89999998865432 1233344456888999999843 33433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ |+|||+++|++. ++.+.+|++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 899999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 5 789998874
No 197
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=9.4e-35 Score=329.53 Aligned_cols=219 Identities=21% Similarity=0.257 Sum_probs=176.2
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 67 (243)
T TIGR01978 1 LKIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLL 67 (243)
T ss_pred CeEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecC
Confidence 35778877763 24699999999999999999999999999999999997411145899999998764
Q ss_pred cc---cc-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC----CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000556 909 QE---TF-ARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP----EVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 979 (1426)
Q Consensus 909 ~~---~~-~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~----~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 979 (1426)
.. .. +..++|++|++..++.+|++|++.+........ ..+.....+.++++++.++|. +..+..++ .
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 143 (243)
T TIGR01978 68 ELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----E 143 (243)
T ss_pred CCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----c
Confidence 32 11 234899999999999999999998764322110 112233345688999999997 45555432 2
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhh-cceEEEEecCc
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDA-FDELFLMKRGG 1058 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~-fD~v~ll~~gg 1058 (1426)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++... +|++++|++ |
T Consensus 144 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G 221 (243)
T TIGR01978 144 GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-G 221 (243)
T ss_pred CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-C
Confidence 59999999999999999999999999999999999999999999999877999999999986 46666 799999985 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (243)
T TIGR01978 222 RIVKSGDV 229 (243)
T ss_pred EEEEecCH
Confidence 89988874
No 198
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=330.16 Aligned_cols=216 Identities=23% Similarity=0.281 Sum_probs=178.8
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISGY 905 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 905 (1426)
+.++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 67888887763 246999999999999999999999999999999999976431 35899999998
Q ss_pred cCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccCCCC
Q 000556 906 PKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL----IQSLVGLPGV 978 (1426)
Q Consensus 906 ~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~~~~ 978 (1426)
++.. ..+++.+||++|++.+++.+||.||+.+....+.. ..+..+..+.++++++.++|.+. .++. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 7643 23456789999999888899999999886543211 11223345568899999998642 3333 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|++. ++.+.+|++++|++ |
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 221 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-G 221 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999864 899999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
+++..|+.
T Consensus 222 ~i~~~g~~ 229 (250)
T PRK14247 222 QIVEWGPT 229 (250)
T ss_pred eEEEECCH
Confidence 88888875
No 199
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=6.7e-35 Score=340.41 Aligned_cols=206 Identities=27% Similarity=0.385 Sum_probs=173.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1426)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 45999999999999999999999999999999999999987 999999998865322 2467999999998999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
|+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 94 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~l~~~~~~~~~----- 134 (303)
T TIGR01288 94 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADVRVA----- 134 (303)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCchh-----
Confidence 9999987543221100 0011234567899999988777664
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ . +++|+.++|+.+++.++||+|++|++|+
T Consensus 135 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 135 LLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999864 3 4456667888889999999999999999
Q ss_pred EEEecChhhHHH
Q 000556 403 IVYQGPRELVLE 414 (1426)
Q Consensus 403 iv~~G~~~~~~~ 414 (1426)
+++.|+.+++.+
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999988753
No 200
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-35 Score=335.07 Aligned_cols=214 Identities=24% Similarity=0.352 Sum_probs=180.5
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++. +..+|+||||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYSG------------SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeCC------------CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 678888887731 2349999999999999999999999999999999999866 35899999998764
Q ss_pred c---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 909 Q---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 909 ~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
. ...++.+||++|++. .+...||.||+.+..... ..+.+..++.++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 3 234567899999974 234579999998765422 2334445567899999999998877764 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEE
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~ 1063 (1426)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999875 899999999987 57789999999986 789999
Q ss_pred cCC
Q 000556 1064 GPL 1066 (1426)
Q Consensus 1064 G~~ 1066 (1426)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 875
No 201
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=330.93 Aligned_cols=217 Identities=24% Similarity=0.268 Sum_probs=179.0
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 904 (1426)
-++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. ..+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 378899988773 235999999999999999999999999999999999986542 3489999999
Q ss_pred ccCC--c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000556 905 YPKK--Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL----IQSLVGL 975 (1426)
Q Consensus 905 ~~~~--~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~ 975 (1426)
.++. . ..+++.++|++|++.+++.+||.||+.+....+. ...+.+..++.++++++.+++.+. .+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNG-LVKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcC-ccCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8764 1 2345679999999999999999999988654321 111233344568889999998532 3332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 468999999999999999999999999999999999999999999999865 699999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
+ |+++..|+.
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 5 799998875
No 202
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-35 Score=305.13 Aligned_cols=216 Identities=26% Similarity=0.374 Sum_probs=181.2
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
|..+|++|++. .+.+|++||++++|||++||+|||||||||||++|+|...+ .+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 56788998874 35799999999999999999999999999999999998764 4799999999876
Q ss_pred cc---cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000556 909 QE---TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1426)
Q Consensus 909 ~~---~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 985 (1426)
+. ...+..+..+|+..+..-.||+|-+.++..-... .-..++..+.++++|...++.+++... ...|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRD-----YRTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCchH
Confidence 53 3456678999998876667999999987432211 111123344578999999999988765 46899999
Q ss_pred HHHHHHHHHHhh------CCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 986 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 986 rqRl~iA~~L~~------~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
||||.+||.|+. ++++||||||||.||...+..++++.|+++++|..|+++.||.+. ...++|+|++|++ |+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 999999999975 356999999999999999999999999999999999999999985 6789999999985 89
Q ss_pred EEEEcCCC
Q 000556 1060 EIYVGPLG 1067 (1426)
Q Consensus 1060 ~v~~G~~~ 1067 (1426)
++..|+..
T Consensus 219 v~a~g~p~ 226 (259)
T COG4559 219 VIASGSPQ 226 (259)
T ss_pred EeecCCHH
Confidence 99999864
No 203
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=7.7e-35 Score=328.70 Aligned_cols=215 Identities=25% Similarity=0.368 Sum_probs=173.4
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 45999999999999999999999999999999999999887 9999999998765432 2458999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
+||+||+.++....+... ... .. ...+ ..+....++++++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~~-------~~~---~~---~~~~-----------~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (236)
T cd03219 90 LTVLENVMVAAQARTGSG-------LLL---AR---ARRE-----------EREARERAEELLERVGLADLADRPA---- 141 (236)
T ss_pred CCHHHHHHHHHhhccccc-------ccc---cc---cccc-----------HHHHHHHHHHHHHHcCccchhhCCh----
Confidence 999999998754321100 000 00 0000 0012234677899999987666544
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ .+ ++|+.++|+..++.+++|+|++|++
T Consensus 142 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 142 -GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RG-ITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCHHHHHHhCCEEEEEeC
Confidence 57999999999999999999999999999999999999999999999865 34 4455578888899999999999999
Q ss_pred CeEEEecChhhHH
Q 000556 401 GQIVYQGPRELVL 413 (1426)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1426)
|++++.|+++++.
T Consensus 219 G~i~~~~~~~~~~ 231 (236)
T cd03219 219 GRVIAEGTPDEVR 231 (236)
T ss_pred CEEEeecCHHHhc
Confidence 9999999988763
No 204
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-35 Score=331.78 Aligned_cols=217 Identities=22% Similarity=0.264 Sum_probs=180.1
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 378899988763 2469999999999999999999999999999999999865 3589999999876
Q ss_pred Ccc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC----------C--CCCHHHHHHHHHHHHHHcCCcccccc
Q 000556 908 KQE---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLP----------P--EVDSETRKMFIEEVMELVELKPLIQS 971 (1426)
Q Consensus 908 ~~~---~-~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~----------~--~~~~~~~~~~v~~~l~~l~L~~~~~~ 971 (1426)
... . .+..++|++|++.+++.+||+||+.+....... . .....+..+.++++++.+|+.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 432 1 233479999999999999999999886431110 0 00112233567889999999877776
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcce
Q 000556 972 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDE 1050 (1426)
Q Consensus 972 ~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~ 1050 (1426)
.+ ..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 64 579999999999999999999999999999999999999999999999775 899999999986 57788999
Q ss_pred EEEEecCcEEEEEcCC
Q 000556 1051 LFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1051 v~ll~~gg~~v~~G~~ 1066 (1426)
+++|++ |++++.|+.
T Consensus 224 i~~l~~-g~i~~~~~~ 238 (255)
T PRK11300 224 IYVVNQ-GTPLANGTP 238 (255)
T ss_pred EEEEEC-CeEEecCCH
Confidence 999985 789988875
No 205
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=8.4e-35 Score=323.12 Aligned_cols=200 Identities=30% Similarity=0.419 Sum_probs=167.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1426)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 35899999999999999999999999999999999999887 9999999988754332 3579999999988889999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.++.+..+... .+....++.+++.+||++..+..+ +.
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (213)
T cd03301 90 YDNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRKP-----KQ 130 (213)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCCh-----hh
Confidence 999988654321100 011224567889999987777655 46
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++...+. +|+.++|+.+++.+++|+|++|++|++
T Consensus 131 LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~-tvi~~sH~~~~~~~~~d~i~~l~~g~~ 209 (213)
T cd03301 131 LSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGT-TTIYVTHDQVEAMTMADRIAVMNDGQI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHhcCeEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998753344 455577888889999999999999999
Q ss_pred EEec
Q 000556 404 VYQG 407 (1426)
Q Consensus 404 v~~G 407 (1426)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03301 210 QQIG 213 (213)
T ss_pred EecC
Confidence 9876
No 206
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.5e-35 Score=327.65 Aligned_cols=205 Identities=28% Similarity=0.377 Sum_probs=172.2
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCCCCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHIG 239 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 239 (1426)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999987 9999999998764321 356999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000556 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1426)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1426)
.+|++||+.+.....+... .+....++.+++.+||++..+..+
T Consensus 96 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVPK----------------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 9999999988654322100 001123567889999987766544
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINREL-GLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4799999999999999999999999999999999999999999999876533 4455557777888899999999999
Q ss_pred CCeEEEecChhhHH
Q 000556 400 DGQIVYQGPRELVL 413 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1426)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987653
No 207
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=331.24 Aligned_cols=213 Identities=25% Similarity=0.353 Sum_probs=178.8
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ ++.+|+|+||++++|++++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 67888887763 2469999999999999999999999999999999999865 35799999998754
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000556 909 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1426)
Q Consensus 909 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 985 (1426)
. ...++.++|++|++.+++.+||+|++.+..... ....+..++.++++++.+++.+..++.+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 3 123456899999988878899999998754221 1112233456889999999988777764 5799999
Q ss_pred HHHHHHHHHHh------hCCCeEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 986 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 986 rqRl~iA~~L~------~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|++++ ++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999997 56999999999986 57789999999985 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (258)
T PRK13548 218 RLVADGTP 225 (258)
T ss_pred EEEeeCCH
Confidence 88888875
No 208
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.9e-35 Score=324.11 Aligned_cols=201 Identities=28% Similarity=0.382 Sum_probs=168.6
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1426)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++||+|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999887 9999999988753 246799999999888889999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 000556 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1426)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1426)
||+.++....+... .+....++.+++.+||++..+..+ ..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 99988654322100 001124567889999987766554 469
Q ss_pred ChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec--CCe
Q 000556 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1426)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~--~G~ 402 (1426)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+.+++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETG-KTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 99999999999999999999999999999999999999999998754334 445557777788899999999999 799
Q ss_pred EEEecChh
Q 000556 403 IVYQGPRE 410 (1426)
Q Consensus 403 iv~~G~~~ 410 (1426)
++..++.+
T Consensus 212 i~~~~~~~ 219 (220)
T cd03293 212 IVAEVEVD 219 (220)
T ss_pred EEEEEEec
Confidence 99988753
No 209
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-35 Score=322.78 Aligned_cols=208 Identities=25% Similarity=0.327 Sum_probs=172.0
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
.++|+++.++ .+. .|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~ 64 (211)
T cd03298 2 RLDKIRFSYG-------------EQP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTA 64 (211)
T ss_pred EEEeEEEEeC-------------CEe--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCc
Confidence 5677777663 122 39999999999999999999999999999999875 347999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000556 910 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1426)
Q Consensus 910 ~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 988 (1426)
. ..++.++|++|++.+++.+|++||+.+....+. .. .+..++.++++++.++|.+..++.+ ..||||||||
T Consensus 65 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 136 (211)
T cd03298 65 APPADRPVSMLFQENNLFAHLTVEQNVGLGLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQR 136 (211)
T ss_pred CCHhHccEEEEecccccCCCCcHHHHHhccccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHH
Confidence 2 234679999999999999999999987543211 11 1233456889999999988777764 5799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 989 l~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 137 v~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 137 VALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 99999999999999999999999999999999999999754 899999999986 57788999999986 6776543
No 210
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-34 Score=318.27 Aligned_cols=196 Identities=29% Similarity=0.563 Sum_probs=164.3
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYP 906 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 906 (1426)
.++|+|++|.++.+. +++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~~---------~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKGR---------SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccCC---------CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 589999999997531 2457999999999999999999999999999999999986532 468999999987
Q ss_pred CCcc--cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 907 KKQE--TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 907 ~~~~--~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
.... ..++.++|++|++.+++.+||+|++.+....+ .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 6432 34567999999999999999999998753211 1222 3579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEE
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~ 1063 (1426)
||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 678777776654468889999999986 788765
Q ss_pred c
Q 000556 1064 G 1064 (1426)
Q Consensus 1064 G 1064 (1426)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 211
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=346.23 Aligned_cols=207 Identities=24% Similarity=0.324 Sum_probs=175.9
Q ss_pred cceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCC
Q 000556 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDN 236 (1426)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1426)
...+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 346899999999999999999999999999999999999998 9999999998865432 246999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1426)
+++.+||+||+.|+.+..+... .+....++++++.+||++..++.+
T Consensus 117 l~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~~ 162 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSYP 162 (400)
T ss_pred CCCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcCc
Confidence 9999999999998765432110 001224567899999987766554
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.+++|+|+
T Consensus 163 -----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~-g~TIIivTHd~~~~~~~~Dri~ 236 (400)
T PRK10070 163 -----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKH-QRTIVFISHDLDEAMRIGDRIA 236 (400)
T ss_pred -----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHC-CCeEEEEECCHHHHHHhCCEEE
Confidence 5799999999999999999999999999999999999999999999886533 4455557888899999999999
Q ss_pred EecCCeEEEecChhhHH
Q 000556 397 LLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1426)
+|++|++++.|+++++.
T Consensus 237 vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 237 IMQNGEVVQVGTPDEIL 253 (400)
T ss_pred EEECCEEEecCCHHHHH
Confidence 99999999999988764
No 212
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-35 Score=337.32 Aligned_cols=218 Identities=22% Similarity=0.337 Sum_probs=175.4
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC-------CccceEEEecCCCC-
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF-------VPERTAAYISQHDN- 236 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~- 236 (1426)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 45899999999999999999999999999999999999988 99999999987531 11357999999852
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTM 315 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1426)
.+...||+||+.|+....+... .+....++.+++.+||. +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVSE----------------------------------EDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCChhhhhCC
Confidence 3445799999998754322100 01123467789999997 455544
Q ss_pred ccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 316 vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|++++... +++|+.++|+.+++.+++|+|
T Consensus 143 -----~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~-g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 -----PFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEK-GLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEE
Confidence 45799999999999999999999999999999999999999999999986533 455666888889999999999
Q ss_pred EEecCCeEEEecChhhHHH---HHHhcCCCCCC
Q 000556 396 ILLSDGQIVYQGPRELVLE---FFESMGFKCPK 425 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~---~F~~~Gf~cp~ 425 (1426)
++|++|++++.|+++++.+ .+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 9999999999999887642 33344554443
No 213
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.4e-34 Score=327.70 Aligned_cols=215 Identities=26% Similarity=0.317 Sum_probs=178.4
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ .+.+|+|+||++++||+++|+|+|||||||||++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRP--DEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCeecC
Confidence 56788877663 24699999999999999999999999999999999998653 4799999998754
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC--C---CCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000556 909 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP--P---EVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 909 ~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~--~---~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 979 (1426)
.. ..++.++|++|++.+++.+||+||+.+....... . ....+..+++++++++.+|+.+..+..+ +
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----G 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 31 1234699999999999999999999875432100 0 0112234456899999999988777664 5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.||++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999876 799999999986 57788999999986 78
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
++..|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 8888874
No 214
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.4e-34 Score=330.36 Aligned_cols=207 Identities=21% Similarity=0.334 Sum_probs=172.0
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1426)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++..+
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 45899999999999999999999999999999999999987 9999999988754321 35689999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+.+||.||+.+......... . .+....++.+++.+||++..++.+
T Consensus 97 ~~~tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~-- 141 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQLP---------A------------------------PLLHSTVMMKLEAVGLRGAAKLMP-- 141 (269)
T ss_pred CCCCHHHHHHHHHHHccCCC---------H------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 99999999988542110000 0 001123566789999988777655
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.... +++|+.++|+.+++.+++|+|++|
T Consensus 142 ---~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d~v~~l 217 (269)
T PRK11831 142 ---SELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSAL-GVTCVVVSHDVPEVLSIADHAYIV 217 (269)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhhCEEEEE
Confidence 4699999999999999999999999999999999999999999999986533 445555778888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000556 399 SDGQIVYQGPRELVL 413 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1426)
++|++++.|+++++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 215
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=334.74 Aligned_cols=214 Identities=26% Similarity=0.327 Sum_probs=181.0
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 6 l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i~ 72 (279)
T PRK13635 6 IRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVLS 72 (279)
T ss_pred EEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECC
Confidence 789999887741 123599999999999999999999999999999999998763 4899999998765
Q ss_pred cc---cccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 909 QE---TFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 909 ~~---~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
.. ..++.+||++|++. .++..||.||+.+..... ....++.+++++++++.+||.+..++.+ ..||||
T Consensus 73 ~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G 144 (279)
T PRK13635 73 EETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSGG 144 (279)
T ss_pred cCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHH
Confidence 32 23567999999973 566789999998865432 1233444567899999999998888774 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEE
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~ 1063 (1426)
||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++ ..+|++++|++ |++++.
T Consensus 145 ~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~~ 221 (279)
T PRK13635 145 QKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILEE 221 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999999876 899999999986 35 46999999985 789999
Q ss_pred cCC
Q 000556 1064 GPL 1066 (1426)
Q Consensus 1064 G~~ 1066 (1426)
|+.
T Consensus 222 g~~ 224 (279)
T PRK13635 222 GTP 224 (279)
T ss_pred CCH
Confidence 875
No 216
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.2e-34 Score=326.30 Aligned_cols=205 Identities=23% Similarity=0.371 Sum_probs=171.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 46999999999999999999999999999999999999987 9999999988754332 2468999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
+||+||+.+.....+... .+....++.+++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 131 (232)
T cd03218 90 LTVEENILAVLEIRGLSK----------------------------------KEREEKLEELLEEFHITHLRKSKA---- 131 (232)
T ss_pred CcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh----
Confidence 999999987643221100 001224567889999987766554
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+.+++.+++|+|++|++
T Consensus 132 -~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~ 208 (232)
T cd03218 132 -SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-R-GIGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998864 3 44555577888899999999999999
Q ss_pred CeEEEecChhhHH
Q 000556 401 GQIVYQGPRELVL 413 (1426)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1426)
|++++.|+.+++.
T Consensus 209 G~i~~~~~~~~~~ 221 (232)
T cd03218 209 GKVLAEGTPEEIA 221 (232)
T ss_pred CeEEEEeCHHHhh
Confidence 9999999987653
No 217
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.2e-35 Score=342.14 Aligned_cols=212 Identities=27% Similarity=0.434 Sum_probs=179.1
Q ss_pred CCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcC
Q 000556 825 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG 904 (1426)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 904 (1426)
.+..++|+||+++|. +++++|++|||+|++||.+||+|+|||||||++++|.+... .+|+|.|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 345699999999985 24569999999999999999999999999999999998765 479999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------cccccc
Q 000556 905 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVG 974 (1426)
Q Consensus 905 ~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg 974 (1426)
.++++ ...|+.+|||||+..++. -||.+|+.|+. .+.+.+ +|-++.+..++.+. .+|.||
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHh
Confidence 98765 457889999999988774 69999999863 233333 35666677666553 455677
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEE
Q 000556 975 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1054 (1426)
Q Consensus 975 ~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll 1054 (1426)
..| ..|||||||||+||||++++|+|+++|||||.||..+...+++.+.+. ..|+|+|++.|+. ++.+.||+|++|
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVL 558 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEE
Confidence 764 579999999999999999999999999999999999999999999984 4589999999996 478999999999
Q ss_pred ecCcEEEEEcCC
Q 000556 1055 KRGGQEIYVGPL 1066 (1426)
Q Consensus 1055 ~~gg~~v~~G~~ 1066 (1426)
++ |++...|+.
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 96 688888875
No 218
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=323.69 Aligned_cols=201 Identities=26% Similarity=0.345 Sum_probs=166.2
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1426)
..+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999999887 9999999998765432 2469999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++.+||+||+.+.....+... .+.+..++.+++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 999999999998654221100 001224567899999987766554
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+.||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQ-GTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhC-CCEEEEEeCCHHHHHh-hCEEEE
Confidence 4699999999999999999999999999999999999999999999876433 4455556777777665 589999
Q ss_pred ecCCeEEEecCh
Q 000556 398 LSDGQIVYQGPR 409 (1426)
Q Consensus 398 L~~G~iv~~G~~ 409 (1426)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998864
No 219
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=329.35 Aligned_cols=217 Identities=18% Similarity=0.250 Sum_probs=179.2
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 904 (1426)
.+.++|+++.++ .+.+|+|+|+++++||++||+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 378899988873 246999999999999999999999999999999999976432 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 975 (1426)
.++.. ...++.++|++|++.+++.+||+||+.+....+. ..+.+..++.++++++.+++.+ ..++.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87531 2345679999999999999999999987654331 1123344556889999999853 33333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 468999999999999999999999999999999999999999999999864 699999999986 5778999999997
Q ss_pred c-----CcEEEEEcCC
Q 000556 1056 R-----GGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~-----gg~~v~~G~~ 1066 (1426)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 2 4899998875
No 220
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=327.47 Aligned_cols=219 Identities=21% Similarity=0.293 Sum_probs=176.3
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCC---CCceEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRK---TGGYITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~---~~~~~~G~i~i~g 904 (1426)
.++++|+++.+. .+.+|+|+|+++++||+++|+|+||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 477889887763 246999999999999999999999999999999999952 2212479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 979 (1426)
.++.. ...++.++|++|++.+++ .|+.||+.+....+. ....+..++.++++++.+++.+..+..... .+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNG--VKDNAFIRQRVEETLKGAALWDEVKDKLKE-SAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCcchhhhhhC-Ccc
Confidence 87643 123567999999988877 699999987654331 112233445688999999986532211111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999985 4899999999987 57789999999985 79
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 9999875
No 221
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=7.2e-35 Score=326.91 Aligned_cols=204 Identities=24% Similarity=0.348 Sum_probs=168.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC-----CCCCCceeEEEEcCccCCCCC-----ccceEEEecCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKL-----DSSLKVSGRVTYNGHDMGEFV-----PERTAAYISQH 234 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~-----~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~ 234 (1426)
+++|+|+|+++++||+++|+||||||||||+++|+|.+ +|. +|+|.++|+++.... .++.++|++|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 36999999999999999999999999999999999999 776 999999998875432 13579999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccc
Q 000556 235 DNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1426)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1426)
+.++ .+||+||+.++....+.... .+....++++++.+||.+..+.
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~ 135 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGIKLK---------------------------------EELDERVEEALRKAALWDEVKD 135 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCChHHhc
Confidence 8777 79999999886543211000 0012345678899999876655
Q ss_pred cccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCe
Q 000556 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1426)
Q Consensus 315 ~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~ 394 (1426)
.+. ++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+.+++.+++|+
T Consensus 136 ~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~ 209 (227)
T cd03260 136 RLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADR 209 (227)
T ss_pred cCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCE
Confidence 431 357999999999999999999999999999999999999999999999864 3 5566678888889999999
Q ss_pred EEEecCCeEEEecChhh
Q 000556 395 IILLSDGQIVYQGPREL 411 (1426)
Q Consensus 395 vilL~~G~iv~~G~~~~ 411 (1426)
|++|++|++++.|+.++
T Consensus 210 i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 210 TAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEEeCCEEEEecCccc
Confidence 99999999999998764
No 222
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=328.24 Aligned_cols=220 Identities=24% Similarity=0.315 Sum_probs=177.3
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCC---CceEEEEEEEc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT---GGYITGNITIS 903 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~---~~~~~G~i~i~ 903 (1426)
..+.++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+.+|+|.++
T Consensus 5 ~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 71 (253)
T PRK14242 5 PKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLD 71 (253)
T ss_pred cEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEEC
Confidence 3589999998873 2359999999999999999999999999999999999642 11357999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000556 904 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1426)
Q Consensus 904 g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 978 (1426)
|.++.. ...++.++|++|++.+++ .||+||+.+....+. ....+...+.++++++.+++.+........ .+
T Consensus 72 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~ 147 (253)
T PRK14242 72 GENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNG--VKDKAYLAERVERSLRHAALWDEVKDRLHE-SA 147 (253)
T ss_pred CEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-Cc
Confidence 987642 123567999999988887 599999988654331 112233345688899999986432211111 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|++. ++.+.+|++++|++ |
T Consensus 148 ~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l~~-G 224 (253)
T PRK14242 148 LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFFYM-G 224 (253)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999854 799999999986 57788999999986 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
+++..|+.
T Consensus 225 ~i~~~g~~ 232 (253)
T PRK14242 225 KLIEVGPT 232 (253)
T ss_pred EEEEeCCH
Confidence 88888864
No 223
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-35 Score=297.84 Aligned_cols=200 Identities=26% Similarity=0.387 Sum_probs=177.5
Q ss_pred eEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHH
Q 000556 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYE 933 (1426)
Q Consensus 854 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e 933 (1426)
..+|+|||+.|.+||.++++||||||||||||+++|..+ +..|+|.+||.+++...- .-|.|+|++.++|.+||.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 358999999999999999999999999999999999887 458999999998765432 2489999999999999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCH
Q 000556 934 SLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1013 (1426)
Q Consensus 934 ~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~ 1013 (1426)
|+.|+.+++ .+++.+|.+.+.+.+..+||.+..++.+ -.||||||||+.|||||+.+|++|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999998887 5678889999999999999999887764 58999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEecC-cEEEEEcCC
Q 000556 1014 RAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRG-GQEIYVGPL 1066 (1426)
Q Consensus 1014 ~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g-g~~v~~G~~ 1066 (1426)
-+++.++++|-++.+ +|+.++++||+.. |..-+.+++++|+.| |+++..=|.
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~ 219 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPL 219 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCC
Confidence 999999999999875 5999999999987 455677999999843 677766554
No 224
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=330.43 Aligned_cols=217 Identities=25% Similarity=0.337 Sum_probs=179.9
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ ++.+|+|||+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 67888887763 3469999999999999999999999999999999999865 35799999998753
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 909 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 909 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
. ...++.++|++|+...++.+|+.|++.+....... .........+.++++++.+++.+..++.+ ..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHH
Confidence 2 22345689999998888889999999875311000 01111233456889999999988777763 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999999877999999999986 57889999999985 7888888
Q ss_pred CCC
Q 000556 1065 PLG 1067 (1426)
Q Consensus 1065 ~~~ 1067 (1426)
+.+
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 753
No 225
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=333.17 Aligned_cols=213 Identities=24% Similarity=0.358 Sum_probs=177.4
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 56788887763 2359999999999999999999999999999999999866 34899999998763
Q ss_pred c-----ccccceEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 909 Q-----ETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 909 ~-----~~~~~~~gyv~q~~~~-~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
. ...++.++|++|++.. ....|+.||+.+....+ ....++..+.++++++.+++.+..++. +..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCC
Confidence 1 1234678999999753 34568999998764332 123334445688999999998877765 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 57788999999986 78998
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 8874
No 226
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.4e-34 Score=342.62 Aligned_cols=209 Identities=25% Similarity=0.294 Sum_probs=176.4
Q ss_pred cccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCc----cCCCCCc-------cceEEE
Q 000556 162 KKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGH----DMGEFVP-------ERTAAY 230 (1426)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~----~~~~~~~-------~~~~~y 230 (1426)
.....+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|. ++..... ++.++|
T Consensus 34 ~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~ 110 (382)
T TIGR03415 34 TGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSM 110 (382)
T ss_pred hCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEE
Confidence 34577999999999999999999999999999999999999998 999999996 3333221 246999
Q ss_pred ecCCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc
Q 000556 231 ISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV 310 (1426)
Q Consensus 231 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 310 (1426)
|+|++.+++.+||+||+.|+....+... .+.+..++++++.+||++
T Consensus 111 vfQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~ 156 (382)
T TIGR03415 111 VFQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQ 156 (382)
T ss_pred EECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCch
Confidence 9999999999999999999865433210 011234677899999988
Q ss_pred cccccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHh
Q 000556 311 CADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYD 390 (1426)
Q Consensus 311 ~~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~ 390 (1426)
..|..+ ..|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+.. +.+|+.++|+.+++.+
T Consensus 157 ~~~~~~-----~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~-~~TII~iTHdl~e~~~ 230 (382)
T TIGR03415 157 WADKKP-----GELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKL-NKTIIFVSHDLDEALK 230 (382)
T ss_pred hhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHH
Confidence 777655 4699999999999999999999999999999999999999999999886533 4555558888999999
Q ss_pred hcCeEEEecCCeEEEecChhhHH
Q 000556 391 LFDDIILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 391 ~fD~vilL~~G~iv~~G~~~~~~ 413 (1426)
++|+|++|++|+++..|+++++.
T Consensus 231 l~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 231 IGNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred hCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999998875
No 227
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=331.24 Aligned_cols=220 Identities=27% Similarity=0.353 Sum_probs=181.3
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYP 906 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 906 (1426)
-+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 478889887763 246999999999999999999999999999999999986543 236999999987
Q ss_pred CCc--------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-----CCCHHHHHHHHHHHHHHcCCcccccccc
Q 000556 907 KKQ--------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-----EVDSETRKMFIEEVMELVELKPLIQSLV 973 (1426)
Q Consensus 907 ~~~--------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~-----~~~~~~~~~~v~~~l~~l~L~~~~~~~v 973 (1426)
... ...++.++|++|++.+++.+||.||+.+......+. ....+..+++++++++.+++.+..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 123456899999999899999999998753211000 1112334457899999999988777764
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEE
Q 000556 974 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELF 1052 (1426)
Q Consensus 974 g~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ 1052 (1426)
..||+|||||++|||+|+.+|++|+|||||+|||..++..+.+.|++++++ |+|||+++|++. ++.+.+|+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 579999999999999999999999999999999999999999999999764 899999999986 4788999999
Q ss_pred EEecCcEEEEEcCCC
Q 000556 1053 LMKRGGQEIYVGPLG 1067 (1426)
Q Consensus 1053 ll~~gg~~v~~G~~~ 1067 (1426)
+|++ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9985 7888888753
No 228
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=345.67 Aligned_cols=202 Identities=24% Similarity=0.295 Sum_probs=175.0
Q ss_pred ceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcc---c----ccceEEEeccCCCC
Q 000556 853 KLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDIH 925 (1426)
Q Consensus 853 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~q~~~~ 925 (1426)
...+|+|+||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++... . .++.+||++|+..+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p--~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP--TRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCC--CCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 34689999999999999999999999999999999998763 479999999876431 1 13468999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEe
Q 000556 926 SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1005 (1426)
Q Consensus 926 ~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLD 1005 (1426)
++.+||+||+.|....+. ...+..+++++++++.++|.+..++.+ ..||||||||++|||||+.+|++||||
T Consensus 118 ~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLLD 189 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLMD 189 (400)
T ss_pred CCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999999999998765431 233445567899999999998887764 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1006 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1006 EPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
|||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 190 EAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999875 4899999999986 57889999999985 789988875
No 229
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.4e-34 Score=337.13 Aligned_cols=205 Identities=27% Similarity=0.383 Sum_probs=176.0
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1426)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999988 999999998875422 2357999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
|+||+.+.+++.+... .+....++.+++.+||++..++.++
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 132 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG----- 132 (301)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchh-----
Confidence 9999998765433110 0112245778999999988876654
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
.|||||||||+||+||+++|++++|||||+|||+.+...+.+.|+++. .+ ++|+.++|..+++.++||+|++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 133 QLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG--KD-KTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc--CC-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999999874 24 556667888899999999999999999
Q ss_pred EEEecChhhHHH
Q 000556 403 IVYQGPRELVLE 414 (1426)
Q Consensus 403 iv~~G~~~~~~~ 414 (1426)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998754
No 230
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=330.97 Aligned_cols=217 Identities=29% Similarity=0.374 Sum_probs=180.4
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ ++.+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 488999988763 2469999999999999999999999999999999999865 3479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
.. ..+++.++|++|+..+++.+|+.||+.+....... ........++.++++++.+++.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 23456789999998888889999999875321110 00111223456889999999988777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
|||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 899999999986 57789999999985 78888
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
.|+.
T Consensus 229 ~~~~ 232 (265)
T PRK10575 229 QGTP 232 (265)
T ss_pred ecCH
Confidence 8875
No 231
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-34 Score=323.66 Aligned_cols=212 Identities=26% Similarity=0.389 Sum_probs=180.1
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
.++|+++.+. .+.+++|+|++++|||+++|+|+||||||||+++|+|..++ ..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCc
Confidence 5778877763 24699999999999999999999999999999999998763 47999999987653
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000556 910 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1426)
Q Consensus 910 ~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 988 (1426)
. ..++.++|++|++..++.+|+.||+.+....+. ......++.++++++.+++.+..++.+ ..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHH
Confidence 2 124578999999998888999999987654331 223334556889999999998877763 5899999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 989 l~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999999765 899999999986 57889999999986 788888763
No 232
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=328.97 Aligned_cols=218 Identities=21% Similarity=0.267 Sum_probs=179.1
Q ss_pred CCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCC--C-ceEEEEEE
Q 000556 825 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNIT 901 (1426)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~ 901 (1426)
.+..+.++|+++.++ +..+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.
T Consensus 10 ~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~ 76 (260)
T PRK10744 10 APSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEIL 76 (260)
T ss_pred CCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEE
Confidence 345689999998873 2359999999999999999999999999999999999753 1 13579999
Q ss_pred EcCccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccc
Q 000556 902 ISGYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSL 972 (1426)
Q Consensus 902 i~g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~ 972 (1426)
++|.+... ...++.++|++|++.+++ .|++||+.+....+. ..+.+..+++++++++.+++.+ ..+..
T Consensus 77 ~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 153 (260)
T PRK10744 77 LDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS 153 (260)
T ss_pred ECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC
Confidence 99987632 134567999999988877 899999987653321 1233444566889999999853 23333
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEE
Q 000556 973 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELF 1052 (1426)
Q Consensus 973 vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ 1052 (1426)
...||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++. ++.|||+++|++. ++.+.+|+++
T Consensus 154 -----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~ 226 (260)
T PRK10744 154 -----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTA 226 (260)
T ss_pred -----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEE
Confidence 45799999999999999999999999999999999999999999999996 4789999999986 5778899999
Q ss_pred EEecCcEEEEEcCC
Q 000556 1053 LMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1053 ll~~gg~~v~~G~~ 1066 (1426)
+|++ |+++..|+.
T Consensus 227 ~l~~-G~i~~~g~~ 239 (260)
T PRK10744 227 FMYL-GELIEFGNT 239 (260)
T ss_pred EEEC-CEEEEeCCH
Confidence 9985 789988874
No 233
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.1e-34 Score=323.70 Aligned_cols=203 Identities=29% Similarity=0.420 Sum_probs=170.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1426)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 46999999999999999999999999999999999999987 999999998875321 2356999999998888999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
|+||+.+..+..+... .+....++++++.+||++..++.+ .
T Consensus 92 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 132 (220)
T cd03263 92 VREHLRFYARLKGLPK----------------------------------SEIKEEVELLLRVLGLTDKANKRA-----R 132 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhChh-----h
Confidence 9999988654332100 001123567888999987777655 4
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++++ + .+|+.++|+.+++.+.+|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998753 3 555667788888889999999999999
Q ss_pred EEEecChhhH
Q 000556 403 IVYQGPRELV 412 (1426)
Q Consensus 403 iv~~G~~~~~ 412 (1426)
+++.|+.+++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 234
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-34 Score=328.65 Aligned_cols=225 Identities=22% Similarity=0.265 Sum_probs=182.4
Q ss_pred ccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCC---ceEEE
Q 000556 822 LPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITG 898 (1426)
Q Consensus 822 ~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G 898 (1426)
+|..+..+.++|+++.++ .+.+|+|||+++++||++||+|+||||||||+++|+|...+ .+.+|
T Consensus 14 ~~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G 80 (267)
T PRK14237 14 FPEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTG 80 (267)
T ss_pred cCCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcce
Confidence 344455799999998873 24699999999999999999999999999999999997642 13589
Q ss_pred EEEEcCccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc
Q 000556 899 NITISGYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLV 973 (1426)
Q Consensus 899 ~i~i~g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~v 973 (1426)
+|.++|.+... ...++.++|++|++.+++ .||+||+.+..... .....+..++.++++++.++|.+..+...
T Consensus 81 ~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~ 157 (267)
T PRK14237 81 QILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDL 157 (267)
T ss_pred EEEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhh
Confidence 99999987642 123567899999988877 69999998864322 11223344566889999999864322222
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEE
Q 000556 974 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFL 1053 (1426)
Q Consensus 974 g~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~l 1053 (1426)
.. .+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||+++|+++ ++.+.+|++++
T Consensus 158 ~~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~ 234 (267)
T PRK14237 158 HK-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAF 234 (267)
T ss_pred cC-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEE
Confidence 22 246899999999999999999999999999999999999999999999985 4799999999987 57889999999
Q ss_pred EecCcEEEEEcCC
Q 000556 1054 MKRGGQEIYVGPL 1066 (1426)
Q Consensus 1054 l~~gg~~v~~G~~ 1066 (1426)
|++ |+++..|+.
T Consensus 235 l~~-G~i~~~g~~ 246 (267)
T PRK14237 235 FYL-GDLIEYDKT 246 (267)
T ss_pred EEC-CEEEEeCCH
Confidence 985 799999885
No 235
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=331.42 Aligned_cols=218 Identities=23% Similarity=0.294 Sum_probs=181.7
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTP--AHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEEh
Confidence 588999998874 24699999999999999999999999999999999998663 479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-EVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
.. ...++.++|++|++..++..|++|++.+......+. ....+..++.++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCCh
Confidence 43 223456899999998888899999997642111000 001123345688999999998877776 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++.+.+|++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 899999999986 58899999999985 78999
Q ss_pred EcCCC
Q 000556 1063 VGPLG 1067 (1426)
Q Consensus 1063 ~G~~~ 1067 (1426)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 88853
No 236
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.3e-34 Score=323.78 Aligned_cols=203 Identities=24% Similarity=0.395 Sum_probs=167.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 46999999999999999999999999999999999999987 9999999988765432 3469999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHh-CCcccccccccCc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLEVCADTMVGDE 319 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vG~~ 319 (1426)
+||+||+.+.....+ .. +....++.+++.+ ++++..++.+
T Consensus 90 ~t~~~~l~~~~~~~~--~~----------------------------------~~~~~~~~~l~~~~~l~~~~~~~~--- 130 (222)
T cd03224 90 LTVEENLLLGAYARR--RA----------------------------------KRKARLERVYELFPRLKERRKQLA--- 130 (222)
T ss_pred CcHHHHHHHHhhhcC--ch----------------------------------hHHHHHHHHHHHHHhhhhhhhCch---
Confidence 999999988653221 00 0011234456666 4665555444
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|++++. . +++|+.++|+..++.+++|+|++|+
T Consensus 131 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 206 (222)
T cd03224 131 --GTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-E-GVTILLVEQNARFALEIADRAYVLE 206 (222)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhccEEEEee
Confidence 46999999999999999999999999999999999999999999998864 3 4455557788888999999999999
Q ss_pred CCeEEEecChhhHH
Q 000556 400 DGQIVYQGPRELVL 413 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1426)
+|++++.|+.+++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (222)
T cd03224 207 RGRVVLEGTAAELL 220 (222)
T ss_pred CCeEEEeCCHHHHh
Confidence 99999999987653
No 237
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-34 Score=343.68 Aligned_cols=206 Identities=29% Similarity=0.457 Sum_probs=166.2
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1426)
++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+..+..+ +++++||+|++.+++ .|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-cc
Confidence 6899999999999999999999999999999999999987 9999999999887764 588999999986665 59
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
+||||.++.... +. + +++ +++.. ..+.+.+.-++..||.+|+.+ +
T Consensus 411 ireNi~l~~~~~---s~-e---~i~------------------~al~~---------a~l~~~v~~p~GLdt~ige~G-~ 455 (559)
T COG4988 411 IRENILLARPDA---SD-E---EII------------------AALDQ---------AGLLEFVPKPDGLDTVIGEGG-A 455 (559)
T ss_pred HHHHhhccCCcC---CH-H---HHH------------------HHHHH---------hcHHHhhcCCCcccchhccCC-C
Confidence 999999874311 00 0 000 00000 011222223557789999765 5
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
+|||||+|||++|||++++++++++||||++||.+|...|.+.|.++++ ++|+++ ++|. .+...-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~-itHr-l~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLV-ITHR-LEDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEE-EEcC-hHHHhcCCEEEEecCCc
Confidence 8999999999999999999999999999999999999999999999874 456555 5554 34566789999999999
Q ss_pred EEEecChhhHHH
Q 000556 403 IVYQGPRELVLE 414 (1426)
Q Consensus 403 iv~~G~~~~~~~ 414 (1426)
++++|.++++.+
T Consensus 532 l~~~g~~~~L~~ 543 (559)
T COG4988 532 LVEQGTHEELSE 543 (559)
T ss_pred eeccCCHHHHhh
Confidence 999999998854
No 238
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-34 Score=326.85 Aligned_cols=214 Identities=29% Similarity=0.386 Sum_probs=172.1
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC------ccceEEEecCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHDNHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1426)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999999887 999999998876543 135699999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+.+||+||+.++..... .. .... .+.. ..+....++.+++.+||.+..++.+
T Consensus 91 ~~~tv~~~l~~~~~~~~--~~---~~~~------~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 142 (241)
T cd03256 91 ERLSVLENVLSGRLGRR--ST---WRSL------FGLF---------------PKEEKQRALAALERVGLLDKAYQRA-- 142 (241)
T ss_pred ccCcHHHHHHhhhcccc--hh---hhhh------cccC---------------cHHHHHHHHHHHHHcCChhhhCCCc--
Confidence 99999999987642110 00 0000 0000 0011234567889999987666544
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
+.|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++++..+ ++|+.++|+.+++.+++|+|++|
T Consensus 143 ---~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 143 ---DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEG-ITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 57999999999999999999999999999999999999999999999865334 45555788888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000556 399 SDGQIVYQGPRELVL 413 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1426)
++|++++.|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988753
No 239
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.3e-34 Score=329.96 Aligned_cols=223 Identities=23% Similarity=0.295 Sum_probs=179.5
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++.....+ ..+++.+|+|+|+++++||++||+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 67888888774210000 0113569999999999999999999999999999999999866 35899999998764
Q ss_pred cc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000556 909 QE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 979 (1426)
Q Consensus 909 ~~------~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 979 (1426)
.. ..++.++|++|++ .+.+.+||+|++.+...... .......++.++++++.+++. +..+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 31 1345799999996 46678999999976543211 122333455688999999996 556665 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999986 57778999999985 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99998875
No 240
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=8.7e-35 Score=323.70 Aligned_cols=195 Identities=26% Similarity=0.381 Sum_probs=163.6
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC------ccceEEEecCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHDNHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1426)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999999987 999999998875432 135799999999899
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+.+||+||+.++.+..+... .+....++.+++.+||++..++.+
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 136 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHALP-- 136 (216)
T ss_pred ccccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 99999999998754322100 001224567889999987776554
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+.+++.+++|+|++|
T Consensus 137 ---~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 137 ---MQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999998854 3 445566788888898999999999
Q ss_pred cCCeE
Q 000556 399 SDGQI 403 (1426)
Q Consensus 399 ~~G~i 403 (1426)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99974
No 241
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3e-34 Score=322.06 Aligned_cols=213 Identities=24% Similarity=0.366 Sum_probs=176.1
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++... ....+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~~---------~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQGE---------HELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDG--SSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCCC---------cceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCeeEEECCEEc
Confidence 478999988774210 013599999999999999999999999999999999998653 489999999876
Q ss_pred Cccc------c-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000556 908 KQET------F-ARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 980 (1426)
Q Consensus 908 ~~~~------~-~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 980 (1426)
.... . ++.++|++|++.+++.+|+.||+.+....+ ........++++++++.+++.+..+..+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLR---GESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 4321 1 246899999998889999999998765432 1223344567899999999988777664 57
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 981 LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|++. .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999764 899999999986 34 56999999986 67
Q ss_pred EEE
Q 000556 1060 EIY 1062 (1426)
Q Consensus 1060 ~v~ 1062 (1426)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 653
No 242
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=333.03 Aligned_cols=217 Identities=23% Similarity=0.334 Sum_probs=177.0
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++... ...+.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVP--TQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 67889988774210 0013599999999999999999999999999999999998653 5899999998754
Q ss_pred c-------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000556 909 Q-------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGV 978 (1426)
Q Consensus 909 ~-------~~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 978 (1426)
. ...++.++|++|++ .+++ .||+||+.+..... ....+..++.++++++.++|.+ ..+.. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 12456789999996 3444 69999998764332 1233344556889999999973 45554 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
+++..|+.
T Consensus 222 ~i~~~g~~ 229 (280)
T PRK13649 222 KLVLSGKP 229 (280)
T ss_pred EEEEeCCH
Confidence 88888875
No 243
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.5e-34 Score=336.43 Aligned_cols=214 Identities=22% Similarity=0.244 Sum_probs=176.0
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCC--
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHD-- 235 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d-- 235 (1426)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++....+|+|.++|.++..... .+.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 569999999999999999999999999999999999998742348999999998865432 13699999997
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccc
Q 000556 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTM 315 (1426)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1426)
.+.+.+|+.+++.+.....+... ..+....+.++++.+||++..+.
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~~~---------------------------------~~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKGMS---------------------------------KAEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHcCCCChHHH-
Confidence 68899999999987543221000 00112345677899999764332
Q ss_pred ccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 316 vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
+ +..+++|||||||||+||+||+.+|+++++||||+|||..++.++.+.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEE
Confidence 2 3567789999999999999999999999999999999999999999999998653 3566666889999999999999
Q ss_pred EEecCCeEEEecChhhHHH
Q 000556 396 ILLSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1426)
++|++|+|++.|+.+++..
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999998753
No 244
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2e-34 Score=321.26 Aligned_cols=198 Identities=31% Similarity=0.442 Sum_probs=166.2
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCCH
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1426)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999987 999999998875421 23579999999988998999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.+.....+... .+....++++++.+||++..+..+ +.
T Consensus 96 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (218)
T cd03266 96 RENLEYFAGLYGLKG----------------------------------DELTARLEELADRLGMEELLDRRV-----GG 136 (218)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhhhh-----hh
Confidence 999987543321100 011234567899999987776554 46
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
||||||||++||+|++.+|++++|||||+|||+.+...+.+.|+++.. . +.+|+.++|+..++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-L-GKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998854 3 44555577888889999999999999999
Q ss_pred EEec
Q 000556 404 VYQG 407 (1426)
Q Consensus 404 v~~G 407 (1426)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8765
No 245
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-34 Score=320.56 Aligned_cols=198 Identities=26% Similarity=0.394 Sum_probs=166.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1426)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 45999999999999999999999999999999999999887 9999999987653 2346799999999889999999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 000556 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1426)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1426)
||+.+.....+... .+....++++++.+||++..++.+ +.|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EEL 129 (210)
T ss_pred HHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhC
Confidence 99988654322100 001224567889999987776554 469
Q ss_pred ChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000556 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1426)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv 404 (1426)
||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.+ . +.+|+.++|+..++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-A-GKTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998764 3 445566788888899999999999999998
Q ss_pred Eec
Q 000556 405 YQG 407 (1426)
Q Consensus 405 ~~G 407 (1426)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 765
No 246
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-35 Score=318.76 Aligned_cols=223 Identities=25% Similarity=0.343 Sum_probs=194.4
Q ss_pred cceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCC
Q 000556 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDN 236 (1426)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1426)
...-++|+|+.|+.||+..|||-||||||||+++|.++.+|+ +|+|.++|.++..++. ++.++.|+|+-.
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 345689999999999999999999999999999999999998 9999999998876653 367999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1426)
++|..||.||..|+.+.+|++.. +.+.++.+.|+..||+..++.++
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKYP 162 (386)
T ss_pred cccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcCc
Confidence 99999999999999999886431 23345678899999999888654
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
++||||+||||.|||||+.+|+||+||||+|+|||--+.++.+.|.++-+..++ +|+.++|+.+|.+.+-|+|.
T Consensus 163 -----~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~K-TIvFitHDLdEAlriG~rIa 236 (386)
T COG4175 163 -----NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKK-TIVFITHDLDEALRIGDRIA 236 (386)
T ss_pred -----ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCC-eEEEEecCHHHHHhccceEE
Confidence 579999999999999999999999999999999999999999988777665544 45568999999999999999
Q ss_pred EecCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhc
Q 000556 397 LLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVT 437 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~ 437 (1426)
+|++|+||..|+++|++. .|...-+++|..++.
T Consensus 237 imkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v~ 269 (386)
T COG4175 237 IMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNVD 269 (386)
T ss_pred EecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcCC
Confidence 999999999999999974 466666677776543
No 247
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-34 Score=314.27 Aligned_cols=190 Identities=57% Similarity=0.936 Sum_probs=161.8
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.++++|+++.++... .++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~~---------~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVKG---------GKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCCC---------CceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 478899988874210 12469999999999999999999999999999999999643224589999999876
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000556 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 987 (1426)
. ...++.++|++|++.+++.+|++||+.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 5 334567899999998889999999998642110 49999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 988 Rl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
|++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++.++.+.+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999987799999999998744678899999998647888865
No 248
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.5e-34 Score=368.98 Aligned_cols=207 Identities=25% Similarity=0.389 Sum_probs=166.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
.++|+|+|++|+||+.++|+||||||||||+++|+|.+ |. +|+|.+||.++.+... ++.++||+|++.+|. .
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~ 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-G 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-c
Confidence 35899999999999999999999999999999999999 76 8999999999887754 468999999987665 6
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
|++|||.++.. +.+.++..+++...+ .++.+ -.|++..||.||+.+.
T Consensus 438 TI~eNI~~g~~-------------------------~~~~eei~~al~~a~------l~~~i--~~lp~G~dT~vge~G~ 484 (588)
T PRK11174 438 TLRDNVLLGNP-------------------------DASDEQLQQALENAW------VSEFL--PLLPQGLDTPIGDQAA 484 (588)
T ss_pred CHHHHhhcCCC-------------------------CCCHHHHHHHHHHhC------HHHHH--HhcccccccccccCCC
Confidence 99999998632 011111111111100 11222 2466778999998754
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
.||||||||++||||++++|++|+||||||+||+.++..|.+.|+++. .++|+|+. +|.. ++.+.+|+|++|++|
T Consensus 485 -~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIiI-tHrl-~~i~~aD~Iivl~~G 559 (588)
T PRK11174 485 -GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLMV-THQL-EDLAQWDQIWVMQDG 559 (588)
T ss_pred -CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEEE-ecCh-HHHHhCCEEEEEeCC
Confidence 699999999999999999999999999999999999999999998864 35666664 4443 566789999999999
Q ss_pred eEEEecChhhHHH
Q 000556 402 QIVYQGPRELVLE 414 (1426)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1426)
++++.|+++++.+
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999999864
No 249
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.9e-34 Score=329.15 Aligned_cols=217 Identities=27% Similarity=0.386 Sum_probs=179.1
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 56778887763 3469999999999999999999999999999999999865 34799999998754
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 909 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 909 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
. ...++.++|++|++..++.+||.||+.+....... .........++++++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 3 12345689999998777889999999874211000 00111233456889999999988777764 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999997 57789999999985 7888888
Q ss_pred CCC
Q 000556 1065 PLG 1067 (1426)
Q Consensus 1065 ~~~ 1067 (1426)
+.+
T Consensus 220 ~~~ 222 (256)
T TIGR03873 220 PPR 222 (256)
T ss_pred CHH
Confidence 753
No 250
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.9e-34 Score=324.19 Aligned_cols=211 Identities=25% Similarity=0.322 Sum_probs=174.3
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 65 (230)
T TIGR03410 1 LEVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDIT 65 (230)
T ss_pred CEEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 35677877663 2469999999999999999999999999999999999866 34799999998754
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCH
Q 000556 909 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVE-LKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 909 ~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~LSg 983 (1426)
.. ..++.++|++|++.+++.+|+.|++.+....+. .. ..+.++++++.++ +.+..++. +..|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~ 134 (230)
T TIGR03410 66 KLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSG 134 (230)
T ss_pred CCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCH
Confidence 32 124568999999999999999999987654321 11 1233567788776 55555555 457999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~ 212 (230)
T TIGR03410 135 GQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVA 212 (230)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998874 899999999986 57778999999985 78999
Q ss_pred EcCCC
Q 000556 1063 VGPLG 1067 (1426)
Q Consensus 1063 ~G~~~ 1067 (1426)
.|+..
T Consensus 213 ~~~~~ 217 (230)
T TIGR03410 213 SGAGD 217 (230)
T ss_pred ECCHH
Confidence 88753
No 251
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-34 Score=325.77 Aligned_cols=206 Identities=26% Similarity=0.397 Sum_probs=171.2
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
..+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 45999999999999999999999999999999999999987 9999999988764332 35689999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc--cccccccCc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV--CADTMVGDE 319 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vG~~ 319 (1426)
||+||+.++.+..+... .+....+.++++.+||++ ..++
T Consensus 91 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~~----- 131 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFADR----- 131 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHhc-----
Confidence 99999988654322100 001223567889999985 4444
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
.++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|+
T Consensus 132 ~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 132 YPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQEL-GKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 345799999999999999999999999999999999999999999999986532 4455557777788899999999999
Q ss_pred CCeEEEecChhhHH
Q 000556 400 DGQIVYQGPRELVL 413 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1426)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999987763
No 252
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.5e-35 Score=346.01 Aligned_cols=213 Identities=26% Similarity=0.434 Sum_probs=181.0
Q ss_pred CCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcC
Q 000556 825 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG 904 (1426)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 904 (1426)
.+..+..+|++|.++. .+++++|+|++++||+.+||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 3456777799998852 23799999999999999999999999999999999998874 589999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccc------cccC
Q 000556 905 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQS------LVGL 975 (1426)
Q Consensus 905 ~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~------~vg~ 975 (1426)
.+..+ ..+++.++||+|++.+++ -|++||+.++. + +.+ ++.+.++++..+|.+..+. .+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~----~-~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR----P-DAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC----C-cCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 87544 568899999999999886 59999998742 1 122 3447889999998876654 4443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
+.++|||||+|||++||||+++++++++||||++||.++++.|++.|.++++ ++|||++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 4579999999999999999999999999999999999999999999999986 599999999974 567789999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 5 799988874
No 253
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=330.87 Aligned_cols=214 Identities=28% Similarity=0.349 Sum_probs=178.6
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.+. +++.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 56888888763 12359999999999999999999999999999999999865 34799999998763
Q ss_pred c-----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 909 Q-----ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 909 ~-----~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
. ...++.++|++|++. .+...||.|++.+..... ....++..+.+.++++.++|.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 123567999999963 233479999998754321 1233444566889999999998887764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |+++.
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 57788999999986 78998
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 8875
No 254
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=334.13 Aligned_cols=205 Identities=23% Similarity=0.351 Sum_probs=169.1
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC----------------------
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF---------------------- 222 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---------------------- 222 (1426)
..+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+....
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35899999999999999999999999999999999999988 89999998754210
Q ss_pred -----CccceEEEecCCC-CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhh
Q 000556 223 -----VPERTAAYISQHD-NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEAN 296 (1426)
Q Consensus 223 -----~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~ 296 (1426)
..++.++||+|++ ..+...||+|||.|+....+... .+..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------------------------------HHHH
Confidence 1135799999985 34556799999998754332110 0112
Q ss_pred HHHHHHHHHhCCc-ccccccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCC
Q 000556 297 VITDYYLKVLGLE-VCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSG 375 (1426)
Q Consensus 297 ~~~~~~l~~lgL~-~~~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~ 375 (1426)
.+++.+++.+||+ +..+.. +..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 3467789999996 455544 457999999999999999999999999999999999999999999999863 3 4
Q ss_pred eEEEEEecCchhHHhhcCeEEEecCCeEEEecChhhHH
Q 000556 376 TAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 376 t~vi~~~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~ 413 (1426)
++|+.++|+.+++.+.+|+|++|++|++++.|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 55666888889999999999999999999999998864
No 255
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-34 Score=316.01 Aligned_cols=180 Identities=46% Similarity=0.787 Sum_probs=155.9
Q ss_pred ccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCceeEEEEcCccCCCCC--ccceEEEecCCCCC
Q 000556 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD---SSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNH 237 (1426)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~ 237 (1426)
.++.+|+|+|+.+++|++++|+||||||||||+++|+|.++ |+ +|+|.++|+++.... .++.++|++|++.+
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~ 94 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVH 94 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEeccccc
Confidence 34679999999999999999999999999999999999998 55 999999999876532 24579999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++.+||+||+.++.+.. .
T Consensus 95 ~~~~tv~~~l~~~~~~~--------------------------------------------------------------~ 112 (202)
T cd03233 95 FPTLTVRETLDFALRCK--------------------------------------------------------------G 112 (202)
T ss_pred CCCCcHHHHHhhhhhhc--------------------------------------------------------------c
Confidence 99999999998753210 1
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+..+..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+.++|++.||+.+++.+.+|++++
T Consensus 113 ~~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~ 192 (202)
T cd03233 113 NEFVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLV 192 (202)
T ss_pred ccchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEE
Confidence 12334799999999999999999999999999999999999999999999986543567777778888899999999999
Q ss_pred ecCCeEEEec
Q 000556 398 LSDGQIVYQG 407 (1426)
Q Consensus 398 L~~G~iv~~G 407 (1426)
|++|++++.|
T Consensus 193 l~~G~i~~~g 202 (202)
T cd03233 193 LYEGRQIYYG 202 (202)
T ss_pred EECCEEEecC
Confidence 9999998765
No 256
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-34 Score=320.03 Aligned_cols=215 Identities=26% Similarity=0.332 Sum_probs=180.8
Q ss_pred cceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-C-CCCceeEEEEcCccCCCCCc-------cceEEEecCC
Q 000556 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD-S-SLKVSGRVTYNGHDMGEFVP-------ERTAAYISQH 234 (1426)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~-~-~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 234 (1426)
..++++||||.+++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++-.+.. .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999998 4 33468999999998755543 2479999999
Q ss_pred C--CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccc
Q 000556 235 D--NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCA 312 (1426)
Q Consensus 235 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1426)
+ .+.|.+||.+.+.-..+.+.... ...+...++.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 6 67899999988876544321000 0112345677889999998643
Q ss_pred cccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhc
Q 000556 313 DTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLF 392 (1426)
Q Consensus 313 dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~f 392 (1426)
. +-+.++.+|||||||||.||.||+.+|++||.||||++||..++.+|++.|+++.+ ..++.++.++|+..-+.+++
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhc
Confidence 2 33567889999999999999999999999999999999999999999999999987 56778888999999999999
Q ss_pred CeEEEecCCeEEEecChhhHH
Q 000556 393 DDIILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 393 D~vilL~~G~iv~~G~~~~~~ 413 (1426)
|+|+||+.|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999874
No 257
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=331.54 Aligned_cols=216 Identities=22% Similarity=0.337 Sum_probs=174.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCC-CCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHD-NHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 240 (1426)
..+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35899999999999999999999999999999999999988 9999999998864332 35799999986 36778
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
+||+||+.|+.+..+... .+....++.+++.+||++..+..+
T Consensus 97 ~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~---- 138 (279)
T PRK13650 97 ATVEDDVAFGLENKGIPH----------------------------------EEMKERVNEALELVGMQDFKEREP---- 138 (279)
T ss_pred ccHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc----
Confidence 899999998754322110 011234577899999987766554
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++ ..+|+|++|++
T Consensus 139 -~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tilivtH~~~~~-~~~dri~~l~~ 215 (279)
T PRK13650 139 -ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQ-MTVISITHDLDEV-ALSDRVLVMKN 215 (279)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHH-HhCCEEEEEEC
Confidence 47999999999999999999999999999999999999999999999865334 4455567777777 58999999999
Q ss_pred CeEEEecChhhHHH---HHHhcCCCCC
Q 000556 401 GQIVYQGPRELVLE---FFESMGFKCP 424 (1426)
Q Consensus 401 G~iv~~G~~~~~~~---~F~~~Gf~cp 424 (1426)
|+++..|+++++.+ .++..|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13650 216 GQVESTSTPRELFSRGNDLLQLGLDIP 242 (279)
T ss_pred CEEEEECCHHHHHcChHHHHHcCCCCc
Confidence 99999999987653 2334455433
No 258
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.5e-34 Score=324.45 Aligned_cols=198 Identities=24% Similarity=0.370 Sum_probs=167.4
Q ss_pred eeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHH
Q 000556 857 LNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLL 936 (1426)
Q Consensus 857 L~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~ 936 (1426)
|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+...... ..+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999876 358999999987653221 2489999999999999999998
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHH
Q 000556 937 YSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1016 (1426)
Q Consensus 937 f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~ 1016 (1426)
+......+ ....+..++.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 2233444556889999999988777764 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1017 AIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1017 ~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998765 899999999986 57888999999986 788877753
No 259
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.6e-34 Score=318.96 Aligned_cols=198 Identities=22% Similarity=0.305 Sum_probs=167.7
Q ss_pred EeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc-ccccceEEEeccCCCCCCCCCHHHH
Q 000556 856 LLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-ETFARISGYCEQNDIHSPFVTVYES 934 (1426)
Q Consensus 856 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~q~~~~~~~lTv~e~ 934 (1426)
+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.. ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEP--ASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 45799999999999999999999999999999998763 48999999987643 2345679999999999889999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHH
Q 000556 935 LLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1014 (1426)
Q Consensus 935 l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~ 1014 (1426)
+.+...... ... ...++.++++++.+++.+..++.+ ..||+|||||++||++|+.+|++|+|||||+|||..
T Consensus 91 ~~~~~~~~~--~~~-~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KLN-AEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Ccc-HHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 986532211 111 223456788999999988777763 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcC
Q 000556 1015 AAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1065 (1426)
Q Consensus 1015 ~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~ 1065 (1426)
++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |+++..|+
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999986 56788999999985 78888764
No 260
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-34 Score=328.03 Aligned_cols=220 Identities=23% Similarity=0.269 Sum_probs=177.8
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCC---ceEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 904 (1426)
.+.++|+++.+. .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 589999998873 24699999999999999999999999999999999997642 13589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 979 (1426)
.++.. ..+++.++|++|++..++. ||.||+.+....+.. ........+.++++++.+++.+....... ..+.
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLH-EPGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87642 1245678999999888774 999999886543311 11223334568899999999642211111 1146
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 239 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFHL-GN 239 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999865 789999999986 57788999999985 78
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
++..|+.
T Consensus 240 i~~~g~~ 246 (267)
T PRK14235 240 LVEVGDT 246 (267)
T ss_pred EEEeCCH
Confidence 9988874
No 261
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-34 Score=331.45 Aligned_cols=206 Identities=20% Similarity=0.292 Sum_probs=169.6
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-------ccceEEEecCCCC-
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDN- 236 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 236 (1426)
+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 35899999999999999999999999999999999999998 999999999875421 2457999999852
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTM 315 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1426)
.+...||+||+.|+....+... .+....++++++.+||. +..++.
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKMNL----------------------------------DEVKNYAHRLLMDLGFSRDVMSQS 142 (286)
T ss_pred ccchhhHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 3334699999998653221100 01123456789999996 555544
Q ss_pred ccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 316 vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+.+++.+++|+|
T Consensus 143 -----~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 143 -----PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred -----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEE
Confidence 4579999999999999999999999999999999999999999999998653 3456666888888999999999
Q ss_pred EEecCCeEEEecChhhHH
Q 000556 396 ILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1426)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 217 IVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999988764
No 262
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3.7e-34 Score=322.94 Aligned_cols=212 Identities=25% Similarity=0.372 Sum_probs=179.9
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
+++|+++.++ .+.+|+|+|+++.+||+++|+||||||||||+++|+|..+ +..|+|.++|.++..
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 5677777663 2469999999999999999999999999999999999865 347999999987654
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000556 910 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1426)
Q Consensus 910 ~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 988 (1426)
. ..++.++|++|++..++..|+.||+.+....+. .......+.++++++.+++.+..++.+ ..||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 234578999999998889999999987654331 223334456789999999988777764 5799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 989 l~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998775 899999999986 57788999999985 789998885
No 263
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-34 Score=330.01 Aligned_cols=203 Identities=25% Similarity=0.332 Sum_probs=169.9
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCC-CCCCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGEM 241 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1426)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++..
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 5899999999999999999999999999999999999987 9999999998765432 356999999863 45678
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
||+||+.|+....+... .+....++.+++.+||.+..++.+
T Consensus 96 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~----- 136 (274)
T PRK13647 96 TVWDDVAFGPVNMGLDK----------------------------------DEVERRVEEALKAVRMWDFRDKPP----- 136 (274)
T ss_pred cHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCCh-----
Confidence 99999998643221100 011234577899999987777655
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
..|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|++++. . +.+|+.++|+.+++.+.+|+|++|++|
T Consensus 137 ~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 137 YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999864 3 455566788888899999999999999
Q ss_pred eEEEecChhhH
Q 000556 402 QIVYQGPRELV 412 (1426)
Q Consensus 402 ~iv~~G~~~~~ 412 (1426)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998654
No 264
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.5e-34 Score=322.41 Aligned_cols=195 Identities=27% Similarity=0.383 Sum_probs=161.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1426)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999987 9999999998765431 3569999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++.+||+||+.++....+... .+....++.+++.+||++..++.+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 999999999998754332100 001124567889999987666554
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++. .+|+|++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAG-TTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CeEEEEECCHHHHh-hhcEEEE
Confidence 46999999999999999999999999999999999999999999999865334 44555677777775 9999999
Q ss_pred ecCCeE
Q 000556 398 LSDGQI 403 (1426)
Q Consensus 398 L~~G~i 403 (1426)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 265
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-34 Score=323.89 Aligned_cols=220 Identities=20% Similarity=0.283 Sum_probs=178.6
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 904 (1426)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 478899988773 2359999999999999999999999999999999999753 21 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 979 (1426)
.++.. ...++.++|++|+..+++..|++||+.+...... ..+..+.+++++++++.+++.+........ .+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLKS-NAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-CcC
Confidence 87632 2346679999999999999999999987543321 122233345688999999986422111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999975 689999999986 57789999999985 79
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 9998875
No 266
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-34 Score=334.72 Aligned_cols=220 Identities=18% Similarity=0.244 Sum_probs=180.4
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCC-c-eEEEEEEEcCcc
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG-G-YITGNITISGYP 906 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~-~-~~~G~i~i~g~~ 906 (1426)
++++|+++.+.... +...+|+||||+|++||++||+|+||||||||+++|+|...+ + ..+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~~---------~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDES---------APFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCCC---------ccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 68899988774311 124699999999999999999999999999999999997642 2 358999999988
Q ss_pred CCcc---c----ccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc---cccccc
Q 000556 907 KKQE---T----FARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL---IQSLVG 974 (1426)
Q Consensus 907 ~~~~---~----~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~vg 974 (1426)
+... . .++.++|++|++ .+.|.+|+.+++........ ....++.++++.++++.+||.+. .+..
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~-- 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY-- 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC--
Confidence 6432 1 123689999998 46788999988866543321 22345556778999999999753 3333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEE
Q 000556 975 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFL 1053 (1426)
Q Consensus 975 ~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~l 1053 (1426)
+..|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|+|++||+++ .+.+.+|+|++
T Consensus 151 ---p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~v 226 (326)
T PRK11022 151 ---PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIV 226 (326)
T ss_pred ---chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEE
Confidence 468999999999999999999999999999999999999999999999976 4999999999986 46788999999
Q ss_pred EecCcEEEEEcCC
Q 000556 1054 MKRGGQEIYVGPL 1066 (1426)
Q Consensus 1054 l~~gg~~v~~G~~ 1066 (1426)
|.+ |+++..|+.
T Consensus 227 m~~-G~ive~g~~ 238 (326)
T PRK11022 227 MYA-GQVVETGKA 238 (326)
T ss_pred EEC-CEEEEECCH
Confidence 985 899999985
No 267
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.4e-34 Score=340.64 Aligned_cols=203 Identities=21% Similarity=0.310 Sum_probs=175.9
Q ss_pred CceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCc----cCCc---cc---c-cceEEEec
Q 000556 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGY----PKKQ---ET---F-ARISGYCE 920 (1426)
Q Consensus 852 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~----~~~~---~~---~-~~~~gyv~ 920 (1426)
+...+|+|+||+|++||+++|+|+||||||||+++|+|... +.+|+|.++|. ++.. .. . ++.++||+
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 45679999999999999999999999999999999999876 34799999995 2221 11 1 24699999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000556 921 QNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1000 (1426)
Q Consensus 921 q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~ 1000 (1426)
|+..++|.+||+||+.|....+ ..+.+++.++++++++.+||.+..+..+ ..||||||||++|||+|+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999875443 2344556677899999999998888764 4799999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1001 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1001 iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~ 249 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTP 249 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999765 999999999986 57899999999985 799999985
No 268
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=329.73 Aligned_cols=215 Identities=23% Similarity=0.319 Sum_probs=180.2
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++. +++.+|+|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKP--QSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEec
Confidence 4889999887631 124599999999999999999999999999999999998663 479999999886
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 908 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
.. ..+++.++|++|++. .++.+||+||+.+..... ....++..+.++++++.++|.+..++.+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 234567999999974 566789999998764322 1233444556899999999998877764 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|++. ++ ..+|++++|++ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999766 599999999986 34 57999999985 78888
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 269
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.8e-34 Score=344.33 Aligned_cols=209 Identities=26% Similarity=0.413 Sum_probs=175.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
+++|+|+|+.|++||+++|+||||||||||||+|+|.++|. +|+|.++|+++..... ++.++||+|++.+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999987 9999999998865432 36799999999888999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
||+||+.++..-.. .+. ... ..+...+++++++.+||.+..++.+
T Consensus 93 tv~e~v~~~~~~~~--~~~----------------~~~------------~~~~~~~v~~~le~vgl~~~~~~~~----- 137 (402)
T PRK09536 93 DVRQVVEMGRTPHR--SRF----------------DTW------------TETDRAAVERAMERTGVAQFADRPV----- 137 (402)
T ss_pred CHHHHHHhccchhc--ccc----------------cCC------------CHHHHHHHHHHHHHcCCchhhcCCh-----
Confidence 99999998642110 000 000 0012245678899999988777654
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
+.|||||||||.|||||+++|++|+|||||+|||+.+..++.+.|+++++ .+ ++|+.++|+.+++.++||++++|++|
T Consensus 138 ~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g-~TIIivsHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 138 TSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DG-KTAVAAIHDLDLAARYCDELVLLADG 215 (402)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEECCHHHHHHhCCEEEEEECC
Confidence 47999999999999999999999999999999999999999999999875 34 45565788899999999999999999
Q ss_pred eEEEecChhhHH
Q 000556 402 QIVYQGPRELVL 413 (1426)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1426)
++++.|+++++.
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999998864
No 270
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-34 Score=334.86 Aligned_cols=225 Identities=23% Similarity=0.255 Sum_probs=183.8
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
-++.+|+++.+....... ...+...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 478999998875321100 001135699999999999999999999999999999999998653 479999999876
Q ss_pred Ccc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000556 908 KQE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGV 978 (1426)
Q Consensus 908 ~~~------~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 978 (1426)
... .+++.++||+|++ .+.|.+|+.+++....... ......+.++++.++++.+||.+ ..++. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 432 2456799999997 5788999999987654432 12344455677899999999964 45554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
..||||||||++||+||+.+|++|++||||+|||..++..|+++|+++.++ |.|||++||+.+ .+.+.+|++++|.+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 689999999999999999999999999999999999999999999999765 999999999986 46678999999985
Q ss_pred cEEEEEcCC
Q 000556 1058 GQEIYVGPL 1066 (1426)
Q Consensus 1058 g~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 231 G~ive~g~~ 239 (327)
T PRK11308 231 GRCVEKGTK 239 (327)
T ss_pred CEEEEECCH
Confidence 799999985
No 271
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=3.6e-34 Score=320.83 Aligned_cols=204 Identities=34% Similarity=0.537 Sum_probs=164.6
Q ss_pred cceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCC
Q 000556 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD---SSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGE 240 (1426)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 240 (1426)
.+++|+|+|+++++||+++|+||||||||||+++|+|.++ ++ +|+|.++|+++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3569999999999999999999999999999999999998 66 99999999887543345679999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHH-HHHHhCCcccccccccCc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDY-YLKVLGLEVCADTMVGDE 319 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vG~~ 319 (1426)
+||+||+.|+.......... .. ......+. .++.+++++..++.
T Consensus 96 ~tv~enl~~~~~~~~~~~~~---~~----------------------------~~~~~~~~~~l~~~~l~~~~~~~---- 140 (226)
T cd03234 96 LTVRETLTYTAILRLPRKSS---DA----------------------------IRKKRVEDVLLRDLALTRIGGNL---- 140 (226)
T ss_pred CcHHHHHHHHHHhhcccccc---hH----------------------------HHHHHHHHHHHHhhcchhhhccc----
Confidence 99999999875432110000 00 00112233 78888887665544
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++.|++..++.+++|+|++|+
T Consensus 141 -~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~tiii~sh~~~~~~~~~~d~i~~l~ 218 (226)
T cd03234 141 -VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRIVILTIHQPRSDLFRLFDRILLLS 218 (226)
T ss_pred -ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCCCHHHHHhCCEEEEEe
Confidence 457999999999999999999999999999999999999999999998764 355666644444468999999999999
Q ss_pred CCeEEEec
Q 000556 400 DGQIVYQG 407 (1426)
Q Consensus 400 ~G~iv~~G 407 (1426)
+|+++++|
T Consensus 219 ~G~i~~~g 226 (226)
T cd03234 219 SGEIVYSG 226 (226)
T ss_pred CCEEEecC
Confidence 99999876
No 272
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.9e-34 Score=326.92 Aligned_cols=213 Identities=27% Similarity=0.358 Sum_probs=171.0
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC------ccceEEEecCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHDNHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1426)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 45999999999999999999999999999999999999887 999999998875432 135699999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+.+||+||+.++..... ... .... +. ...+....++++++.+||.+..+..
T Consensus 92 ~~~tv~~~l~~~~~~~~--~~~---~~~~------~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~--- 142 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYK--PTW---RSLL------GR---------------FSEEDKERALSALERVGLADKAYQR--- 142 (243)
T ss_pred ccccHHHHHhhcccccc--cch---hhhh------cc---------------ccHHHHHHHHHHHHHcCcHhhhcCC---
Confidence 99999999987532110 000 0000 00 0001123456788999998766654
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
++.|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.+.. +++|+.++|+.+++.+++|+|++|
T Consensus 143 --~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~tH~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 143 --ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKED-GITVIINLHQVDLAKKYADRIVGL 219 (243)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEE
Confidence 45799999999999999999999999999999999999999999999886533 445555778888888999999999
Q ss_pred cCCeEEEecChhhH
Q 000556 399 SDGQIVYQGPRELV 412 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~ 412 (1426)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999998764
No 273
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=359.34 Aligned_cols=221 Identities=21% Similarity=0.290 Sum_probs=185.5
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
-++++|+++.+. ++.+|+||||++++||+++|+||||||||||+++|+|...+++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 378899988773 2469999999999999999999999999999999999865433589999999876
Q ss_pred Cccc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 908 KQET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 908 ~~~~----~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
.... .++.+||++|++.+++.+||+|++.+....+.....+.+...+.++++++.+++.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 4321 24568999999988899999999988653321111223334456899999999988777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~ 1063 (1426)
|||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|.|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999878999999999986 57788999999985 789999
Q ss_pred cCCCc
Q 000556 1064 GPLGR 1068 (1426)
Q Consensus 1064 G~~~~ 1068 (1426)
|+..+
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 88753
No 274
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=324.19 Aligned_cols=219 Identities=21% Similarity=0.271 Sum_probs=176.3
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCC-ceEEEEEEEcCccC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG-GYITGNITISGYPK 907 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~-~~~~G~i~i~g~~~ 907 (1426)
+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.++
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56788887763 24699999999999999999999999999999999997532 24589999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
.. ...++.++|++|++.+++ .|++||+.+....+.. .......+++++++++.++|.+....... .....||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGM-IKNKDEEEALVVDCLQKVGLFEEVKDKLK-QNALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCc-ccChHHHHHHHHHHHHHcCCChhhhHHhc-CCcccCCHH
Confidence 43 234567899999988887 6999999886543311 01122334567899999999543211111 124689999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999986 57789999999985 7999988
Q ss_pred CC
Q 000556 1065 PL 1066 (1426)
Q Consensus 1065 ~~ 1066 (1426)
+.
T Consensus 224 ~~ 225 (246)
T PRK14269 224 ES 225 (246)
T ss_pred CH
Confidence 74
No 275
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2.5e-34 Score=317.72 Aligned_cols=189 Identities=23% Similarity=0.372 Sum_probs=162.2
Q ss_pred eEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc-------ccccceEEEeccCCCCC
Q 000556 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHS 926 (1426)
Q Consensus 854 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~ 926 (1426)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999876 358999999987431 12356799999999988
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeC
Q 000556 927 PFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1006 (1426)
Q Consensus 927 ~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDE 1006 (1426)
+..|++||+.+....+ ........+.++++++.+++.+..++.+ ..||+|||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 8999999998865432 2233444567889999999988777764 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEE
Q 000556 1007 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1054 (1426)
Q Consensus 1007 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll 1054 (1426)
||+|||+.+...+.+.|+++.++|.|||+++|++. +.+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999999877999999999985 45789999875
No 276
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.7e-34 Score=336.01 Aligned_cols=208 Identities=22% Similarity=0.247 Sum_probs=174.0
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCC--C
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHD--N 236 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1426)
..+|+|||++|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|.++.+... ++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 56999999999999999999999999999999999999987 9999999998865432 35799999997 5
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTM 315 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1426)
+++.+||.||+.+..+....+.. ..+....++++++.+||. +..+
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~~~--------------------------------~~~~~~~~~~~l~~vgl~~~~~~-- 156 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPKLS--------------------------------RQEVKDRVKAMMLKVGLLPNLIN-- 156 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccCCC--------------------------------HHHHHHHHHHHHHHcCCChHHhc--
Confidence 78899999999986542210000 001223456789999995 3444
Q ss_pred ccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 316 vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
..+..|||||||||+||+||+.+|+++++||||+|||..++.++++.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 157 ---~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dri 232 (331)
T PRK15079 157 ---RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDRV 232 (331)
T ss_pred ---CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 445679999999999999999999999999999999999999999999998653 3456666899999999999999
Q ss_pred EEecCCeEEEecChhhHH
Q 000556 396 ILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1426)
++|++|++++.|+.+++.
T Consensus 233 ~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999998875
No 277
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.4e-34 Score=318.16 Aligned_cols=195 Identities=26% Similarity=0.373 Sum_probs=164.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC-CccceEEEecCCCCCCCCCCH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF-VPERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV 243 (1426)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 46999999999999999999999999999999999999887 99999999876532 123568999999988989999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.+.....+. .+..++.+++.+||++..++.+ +.
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKV-----KG 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhH-----hh
Confidence 9999886432110 0123466788999987776554 46
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.+ .+.| ++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~t-ii~~tH~~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QGIT-VLISSHLLSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCE-EEEEcCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998764 3444 55577888889899999999999999
Q ss_pred EEec
Q 000556 404 VYQG 407 (1426)
Q Consensus 404 v~~G 407 (1426)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 278
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=3.7e-34 Score=322.56 Aligned_cols=201 Identities=29% Similarity=0.416 Sum_probs=169.3
Q ss_pred CceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc--ccccceEEEec-cCCCCCCC
Q 000556 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ--ETFARISGYCE-QNDIHSPF 928 (1426)
Q Consensus 852 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-q~~~~~~~ 928 (1426)
+.+.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQP--TSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 446799999999999999999999999999999999998653 48999999986432 23456789997 55667788
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCC
Q 000556 929 VTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1008 (1426)
Q Consensus 929 lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPT 1008 (1426)
+|++|++.+....+ ....++..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99999998765443 1223344556788999999998887764 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 1009 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 1009 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999998764 899999999986 57788999999985 6777654
No 279
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=328.30 Aligned_cols=215 Identities=23% Similarity=0.288 Sum_probs=180.2
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++. ..+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 4889999987741 11358999999999999999999999999999999999866 3489999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 908 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
.. ...++.++|++|++. .++..|+.+++.+..... ....+...+.++++++.+++.+..+.. +..||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 43 234567899999974 677789999998864322 123344455688999999998877765 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++. .+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998765 899999999987 455 4999999985 79999
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
.|+.
T Consensus 223 ~g~~ 226 (269)
T PRK13648 223 EGTP 226 (269)
T ss_pred ecCH
Confidence 9875
No 280
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.1e-34 Score=321.80 Aligned_cols=206 Identities=26% Similarity=0.364 Sum_probs=169.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc--cceEEEecCCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP--ERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 242 (1426)
+.+|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++..++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 46999999999999999999999999999999999999987 9999999988754322 246999999988888999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
|+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 91 ~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 131 (236)
T TIGR03864 91 VRQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAERADDKVR----- 131 (236)
T ss_pred HHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCChh-----
Confidence 9999987543321100 0011235677889999877776554
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
.||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++++..+.| ++.++|..+++. .+|+|++|++|+
T Consensus 132 ~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~t-iii~sH~~~~~~-~~d~i~~l~~G~ 209 (236)
T TIGR03864 132 ELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLS-VLWATHLVDEIE-ADDRLVVLHRGR 209 (236)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCE-EEEEecChhhHh-hCCEEEEEeCCe
Confidence 699999999999999999999999999999999999999999999986533444 555677777775 499999999999
Q ss_pred EEEecChhhHHH
Q 000556 403 IVYQGPRELVLE 414 (1426)
Q Consensus 403 iv~~G~~~~~~~ 414 (1426)
+++.|+.+++.+
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999999887653
No 281
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=5.9e-34 Score=334.50 Aligned_cols=224 Identities=21% Similarity=0.293 Sum_probs=182.8
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYP 906 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 906 (1426)
-+.++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 48899998877531 12356999999999999999999999999999999999986532 237999999988
Q ss_pred CCcc---c---c-cceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000556 907 KKQE---T---F-ARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPG 977 (1426)
Q Consensus 907 ~~~~---~---~-~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 977 (1426)
+... . + ++.++||+|++ .+.|.+|+.+++.+...... ....++..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 6431 1 1 24699999998 57889999999876544332 234445556789999999997543221 1 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 978 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 978 ~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
+.+||||||||++||+||+.+|+||++||||+|||..++..+++.|+++.++ |.|+|++|||++ .+.+.+|++++|++
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999999775 999999999986 46678999999985
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 899999985
No 282
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-34 Score=330.86 Aligned_cols=219 Identities=20% Similarity=0.281 Sum_probs=180.4
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
-+.++|+++.++.... ...+.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~~-------~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNEE-------STEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCCC-------CCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 3789999988742100 012469999999999999999999999999999999999876 3589999999876
Q ss_pred Cc----ccccceEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 908 KQ----ETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 908 ~~----~~~~~~~gyv~q~~~~-~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
.. ...++.+||++|++.. +...||.|++.|..... .....+.+++++++++.+||.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 2245679999999742 23468999998865432 2234445567899999999998888774 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v 1061 (1426)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++. .+|++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 999999999987 354 4999999986 7899
Q ss_pred EEcCC
Q 000556 1062 YVGPL 1066 (1426)
Q Consensus 1062 ~~G~~ 1066 (1426)
..|+.
T Consensus 224 ~~g~~ 228 (280)
T PRK13633 224 MEGTP 228 (280)
T ss_pred EecCH
Confidence 88875
No 283
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-34 Score=328.23 Aligned_cols=219 Identities=26% Similarity=0.360 Sum_probs=177.9
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc------eEEEEEEE
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG------YITGNITI 902 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~------~~~G~i~i 902 (1426)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 56788887663 346999999999999999999999999999999999976532 12799999
Q ss_pred cCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000556 903 SGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1426)
Q Consensus 903 ~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 978 (1426)
+|.+... ..+++.++|++|++..++.+||+||+.+....... ........++.++++++.+++.+..++. +
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9987643 23445689999998766679999999875321110 0111123345688999999998877665 3
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhc
Q 000556 979 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAF 1048 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~---------~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~f 1048 (1426)
..||||||||++||++|+ .+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|++. ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 579999999999999999 599999999999999999999999999999776 899999999986 577889
Q ss_pred ceEEEEecCcEEEEEcCCC
Q 000556 1049 DELFLMKRGGQEIYVGPLG 1067 (1426)
Q Consensus 1049 D~v~ll~~gg~~v~~G~~~ 1067 (1426)
|++++|++ |+++..|+..
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999985 7899988753
No 284
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-34 Score=333.87 Aligned_cols=214 Identities=21% Similarity=0.241 Sum_probs=173.2
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CceeEEEEcCccCCCCCc-------cceEEEecCCC-
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL-KVSGRVTYNGHDMGEFVP-------ERTAAYISQHD- 235 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 235 (1426)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999987421 138999999998865432 13699999997
Q ss_pred -CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccc
Q 000556 236 -NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1426)
Q Consensus 236 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1426)
.+.|.+||.+++........... ..+....++++|+.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~~---------------------------------~~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGGN---------------------------------KKTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHCCCCChHH-
Confidence 47889999999876543210000 0112235677899999975221
Q ss_pred cccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCe
Q 000556 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1426)
Q Consensus 315 ~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~ 394 (1426)
+-+..++.|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+.. +.+++.++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~-g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKE-NMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCE
Confidence 1124556899999999999999999999999999999999999999999999986543 45666688999999999999
Q ss_pred EEEecCCeEEEecChhhHHH
Q 000556 395 IILLSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~ 414 (1426)
|++|++|++++.|+.+++.+
T Consensus 224 i~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred EEEEECCEEEEECCHHHHhh
Confidence 99999999999999988753
No 285
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-34 Score=289.05 Aligned_cols=197 Identities=25% Similarity=0.376 Sum_probs=170.5
Q ss_pred CceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcc-------cccceEEEeccCCC
Q 000556 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE-------TFARISGYCEQNDI 924 (1426)
Q Consensus 852 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-------~~~~~~gyv~q~~~ 924 (1426)
....||++|++.|++||.+||+|||||||||||-+|+|...+ .+|+|.+.|++..+. ...+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 457899999999999999999999999999999999998764 489999999986531 23467999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEE
Q 000556 925 HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1004 (1426)
Q Consensus 925 ~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlL 1004 (1426)
+.|++|..||+.....++..... .......+.++.+||.+..+..+ .+|||||+|||+||||++..|+|||-
T Consensus 99 Lip~ltAlENV~lPleL~ge~~~---~~~~~A~~lL~~vGLg~Rl~HyP-----~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESSA---DSRAGAKALLEAVGLGKRLTHYP-----AQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCccc---cHHHHHHHHHHHhCcccccccCc-----cccCchHHHHHHHHHHhcCCCCEEec
Confidence 99999999999988777653221 22334678899999998877763 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEE
Q 000556 1005 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1426)
Q Consensus 1005 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v 1061 (1426)
||||-+||..+...|.+++-.+.++ |.|.|+++|||. +...|||.+-|.. |+++
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~ 225 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLV 225 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceec
Confidence 9999999999999999999988654 999999999985 6889999999986 6765
No 286
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.1e-32 Score=367.17 Aligned_cols=134 Identities=22% Similarity=0.247 Sum_probs=107.9
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000556 925 HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGVSGLSTEQRKRLTIAVELV---ANPS 1000 (1426)
Q Consensus 925 ~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~iA~~L~---~~p~ 1000 (1426)
.+...||.|+|.++..-......+.++..+.+ ++++.+||.+. .+.. ...||||||||+.||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44567999999876542211111223344456 58889999875 5655 3579999999999999998 5999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe-----cCcEEEEEcCC
Q 000556 1001 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK-----RGGQEIYVGPL 1066 (1426)
Q Consensus 1001 iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~-----~gg~~v~~G~~ 1066 (1426)
+++|||||+|||+.+...+++.|++++++|.|||+++|++. .+ +.+|++++|. .||+++..|+.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 99999999999999999999999999888999999999986 34 8999999995 36899999976
No 287
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=331.98 Aligned_cols=219 Identities=20% Similarity=0.312 Sum_probs=177.4
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++... .....+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIIS--ETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEc
Confidence 588999998874210 0013599999999999999999999999999999999998763 479999999875
Q ss_pred Cc--------ccccceEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000556 908 KQ--------ETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPG 977 (1426)
Q Consensus 908 ~~--------~~~~~~~gyv~q~~~~-~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 977 (1426)
.. ...++.++|++|++.. ....|++||+.|..... ....+...+.++++++.++|. +..++.
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 31 2345678999999742 22369999998864322 123344445688899999994 566655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 978 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 978 ~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999998764 899999999986 57889999999985
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 788888874
No 288
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-34 Score=367.26 Aligned_cols=214 Identities=26% Similarity=0.417 Sum_probs=178.2
Q ss_pred CCCCcccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCC
Q 000556 158 LPSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQH 234 (1426)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1426)
+|+| ++.+||+|+|++|++|+.+||+|||||||||...+|-..++|. +|.|.+||+++++.+. |+.+|.|+|+
T Consensus 997 YPsR-P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQE 1072 (1228)
T KOG0055|consen 997 YPTR-PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQE 1072 (1228)
T ss_pred CCCC-CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceeccC
Confidence 4555 4578999999999999999999999999999999999999998 9999999999998876 4789999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccc
Q 000556 235 DNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1426)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1426)
|.+|. .|+||||.|+.. .. + .+ +.++|+.. ....+ =+.+|++.+||
T Consensus 1073 P~LF~-~TIrENI~YG~~--~v-s-~~---------------------eIi~Aak~-----ANaH~---FI~sLP~GyDT 1118 (1228)
T KOG0055|consen 1073 PVLFN-GTIRENIAYGSE--EV-S-EE---------------------EIIEAAKL-----ANAHN---FISSLPQGYDT 1118 (1228)
T ss_pred chhhc-ccHHHHHhccCC--CC-C-HH---------------------HHHHHHHH-----hhhHH---HHhcCcCcccC
Confidence 98876 599999999821 11 1 11 11111110 01112 24589999999
Q ss_pred cccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCe
Q 000556 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1426)
Q Consensus 315 ~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~ 394 (1426)
.||+++. +||||||||++||||+++||+||+|||.||+||+.+.+-+.++|.+.. .++|+|+..|. ..+...+|.
T Consensus 1119 ~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~--~gRT~IvIAHR--LSTIqnaD~ 1193 (1228)
T KOG0055|consen 1119 RVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM--EGRTTIVIAHR--LSTIQNADV 1193 (1228)
T ss_pred ccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh--cCCcEEEEecc--hhhhhcCCE
Confidence 9999887 699999999999999999999999999999999999999999999864 46777775543 457889999
Q ss_pred EEEecCCeEEEecChhhHHH
Q 000556 395 IILLSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~ 414 (1426)
|+|+++|+|+++|++++++.
T Consensus 1194 I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1194 IAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred EEEEECCEEEecccHHHHHh
Confidence 99999999999999999975
No 289
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-34 Score=320.61 Aligned_cols=199 Identities=27% Similarity=0.397 Sum_probs=171.7
Q ss_pred EeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcc-cccceEEEeccCCCCCCCCCHHHH
Q 000556 856 LLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTVYES 934 (1426)
Q Consensus 856 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~q~~~~~~~lTv~e~ 934 (1426)
+|+|+|++|+|||+++|+|+||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999866 3579999999876542 234578999999999989999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHH
Q 000556 935 LLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1014 (1426)
Q Consensus 935 l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~ 1014 (1426)
+.+..... .......++.+.++++.++|.+..++.+ ..||||||||++||++|+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223344456788999999988887764 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1015 AAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1015 ~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
++..+.+.|++++.+ |+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998765 999999999986 57788999999986 788888875
No 290
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=321.45 Aligned_cols=211 Identities=21% Similarity=0.293 Sum_probs=176.5
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|+++.++. + ..|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 568888887741 1 238999999999999999999999999999999865 34799999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000556 909 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1426)
Q Consensus 909 ~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 987 (1426)
.. ..++.++|++|++.+++.+|+.||+.+..... ... .+..++.++++++.+|+.+..++.+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 32 12456899999999999999999997653211 111 1234556899999999998888774 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 988 Rl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998764 899999999986 57788999999985 789998875
No 291
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-34 Score=323.57 Aligned_cols=209 Identities=26% Similarity=0.344 Sum_probs=174.8
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 377889888763 2459999999999999999999999999999999999865 3479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000556 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSg 983 (1426)
.. ...++.++|++|++.+++ .|++||+.+....+ . . ..++++++++.++|. +..++. +..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G--E--KNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C--c--HHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 43 234567899999988776 69999997653321 1 1 124578899999996 455554 457999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 999999999986 57788999999985 78888
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8875
No 292
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=8.7e-34 Score=318.47 Aligned_cols=201 Identities=26% Similarity=0.325 Sum_probs=162.2
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC------ccceEEEecCCC--CC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHD--NH 237 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 237 (1426)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999999987 999999999876543 235799999998 46
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-ccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTMV 316 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1426)
++.+||+||+.+.....+..... .......+.+++.+||. +..+..
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 142 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSKK--------------------------------EARKEAVLLLLVGVGLPEEVLNRY- 142 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcHH--------------------------------HHHHHHHHHHHHHCCCChhHhhCC-
Confidence 67899999998865432110000 00011124677888985 445544
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+. +|+.++|+.+++.+++|+|+
T Consensus 143 ----~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~-tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 143 ----PHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGL-TLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHhcCeEE
Confidence 4469999999999999999999999999999999999999999999998653244 45557778888888999999
Q ss_pred EecCCeEEEec
Q 000556 397 LLSDGQIVYQG 407 (1426)
Q Consensus 397 lL~~G~iv~~G 407 (1426)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 293
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-34 Score=334.23 Aligned_cols=218 Identities=21% Similarity=0.411 Sum_probs=174.2
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC-------------------Ccc
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF-------------------VPE 225 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------------------~~~ 225 (1426)
.++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 45999999999999999999999999999999999999988 99999999887542 113
Q ss_pred ceEEEecCCCC-CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHH
Q 000556 226 RTAAYISQHDN-HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1426)
Q Consensus 226 ~~~~yv~Q~d~-~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1426)
+.++||+|++. .+...||+||+.|+....+.. . .+...+++++++
T Consensus 116 ~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 161 (320)
T PRK13631 116 RRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVK-K---------------------------------SEAKKLAKFYLN 161 (320)
T ss_pred hcEEEEEECchhccccchHHHHHHhhHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 67999999862 333469999998865322110 0 011234567889
Q ss_pred HhCCc-ccccccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEec
Q 000556 305 VLGLE-VCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQ 383 (1426)
Q Consensus 305 ~lgL~-~~~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q 383 (1426)
.+||+ +..++ .+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|
T Consensus 162 ~~gL~~~~~~~-----~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~-g~TiiivtH 234 (320)
T PRK13631 162 KMGLDDSYLER-----SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-N-NKTVFVITH 234 (320)
T ss_pred HcCCChhHhcC-----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEec
Confidence 99996 34443 3457999999999999999999999999999999999999999999998764 3 445556788
Q ss_pred CchhHHhhcCeEEEecCCeEEEecChhhHHH---HHHhcCCCCCCC
Q 000556 384 PAPETYDLFDDIILLSDGQIVYQGPRELVLE---FFESMGFKCPKR 426 (1426)
Q Consensus 384 ~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~---~F~~~Gf~cp~~ 426 (1426)
+.+++.+.+|+|++|++|++++.|+++++.. .++..|+.+|..
T Consensus 235 d~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~ 280 (320)
T PRK13631 235 TMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPRV 280 (320)
T ss_pred CHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCChH
Confidence 8888999999999999999999999987642 344556655543
No 294
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=330.40 Aligned_cols=217 Identities=24% Similarity=0.304 Sum_probs=180.7
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCce-EEEEEEEcCcc
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGY-ITGNITISGYP 906 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~-~~G~i~i~g~~ 906 (1426)
.++++|+++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|...+.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4788999887731 12359999999999999999999999999999999999865321 13899999988
Q ss_pred CCcc---cccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 907 KKQE---TFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 907 ~~~~---~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
.... ..++.+||++|++. .++..||.||+.|....+ ....++.+++++++++.++|.+..++.+ +.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCC
Confidence 6532 23567899999974 566789999998764322 2334455567899999999998777763 6899
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v 1061 (1426)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++. + ..+|++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 9999999999863 4 67999999985 7999
Q ss_pred EEcCC
Q 000556 1062 YVGPL 1066 (1426)
Q Consensus 1062 ~~G~~ 1066 (1426)
..|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 98875
No 295
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.2e-34 Score=317.79 Aligned_cols=192 Identities=26% Similarity=0.357 Sum_probs=160.4
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCC-CCCCCCH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDN-HIGEMTV 243 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 243 (1426)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 46999999999999999999999999999999999999987 9999999988754323457999999864 3556899
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.++....+ . ....++++++.+||++..++.+ ..
T Consensus 90 ~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (205)
T cd03226 90 REELLLGLKELD--A------------------------------------GNEQAETVLKDLDLYALKERHP-----LS 126 (205)
T ss_pred HHHHhhhhhhcC--c------------------------------------cHHHHHHHHHHcCCchhcCCCc-----hh
Confidence 999987542210 0 0123567889999988777655 46
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++++ .+ .+|+.++|+.+++.+++|+|++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-QG-KAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998864 34 4455577888888899999999999997
Q ss_pred E
Q 000556 404 V 404 (1426)
Q Consensus 404 v 404 (1426)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 296
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-34 Score=326.76 Aligned_cols=215 Identities=21% Similarity=0.261 Sum_probs=175.9
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCC---ceEEEEEEEc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITIS 903 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 903 (1426)
..+.++|+++.++ .+.+|+|+||+|++||+++|+||||||||||+++|+|.... .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3589999998873 24699999999999999999999999999999999997542 1358999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000556 904 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVG 974 (1426)
Q Consensus 904 g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg 974 (1426)
|.++.. ...++.++|++|++.+++ .||+||+.+.+..+. ... ..++.++++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 987531 234557899999998887 499999988654331 111 23445778888888743 23333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEE
Q 000556 975 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1054 (1426)
Q Consensus 975 ~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll 1054 (1426)
+..||+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 226 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFF 226 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 468999999999999999999999999999999999999999999999864 799999999986 588999999999
Q ss_pred ec----------CcEEEEEcCC
Q 000556 1055 KR----------GGQEIYVGPL 1066 (1426)
Q Consensus 1055 ~~----------gg~~v~~G~~ 1066 (1426)
++ +|++++.|+.
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred eccccccccccccceEEEeCCH
Confidence 85 2678888875
No 297
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-34 Score=323.30 Aligned_cols=215 Identities=26% Similarity=0.312 Sum_probs=175.6
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 904 (1426)
.+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 378899988773 2369999999999999999999999999999999999632 21 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 975 (1426)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87632 124567999999988877 899999987643321 1122334456788999998853 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
+..||+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 468999999999999999999999999999999999999999999999865 699999999986 5788999999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 789998875
No 298
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-34 Score=334.18 Aligned_cols=222 Identities=17% Similarity=0.207 Sum_probs=178.9
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCC--ceEEEEEEEcCcc
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--GYITGNITISGYP 906 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~~~~G~i~i~g~~ 906 (1426)
+.++|++..+... .+...+|+|||++|++||++||+|+||||||||+++|+|.... ...+|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 6788998877532 1235699999999999999999999999999999999997642 2457999999987
Q ss_pred CCcc---c----ccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCC---CCHHHHHHHHHHHHHHcCCccc---ccc
Q 000556 907 KKQE---T----FARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPE---VDSETRKMFIEEVMELVELKPL---IQS 971 (1426)
Q Consensus 907 ~~~~---~----~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~---~~~~~~~~~v~~~l~~l~L~~~---~~~ 971 (1426)
+... . .++.++||+|++. +.|.+||.+++.+......... ....+.++.+.++++.+||.+. .+.
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 6431 1 1346999999976 5688999999976422111000 1112345678899999999753 334
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcce
Q 000556 972 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDE 1050 (1426)
Q Consensus 972 ~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~ 1050 (1426)
. +..|||||||||+||+||+.+|+||+|||||+|||+.++..+++.|+++.++ |.|||++||+++ .+.+.+|+
T Consensus 155 ~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dr 228 (330)
T PRK15093 155 F-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADK 228 (330)
T ss_pred C-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 3 4689999999999999999999999999999999999999999999999875 999999999986 57789999
Q ss_pred EEEEecCcEEEEEcCC
Q 000556 1051 LFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1051 v~ll~~gg~~v~~G~~ 1066 (1426)
+++|.+ |+++..|+.
T Consensus 229 i~vm~~-G~ive~g~~ 243 (330)
T PRK15093 229 INVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEC-CEEEEECCH
Confidence 999985 799999975
No 299
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=8e-34 Score=317.16 Aligned_cols=196 Identities=24% Similarity=0.351 Sum_probs=160.6
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1426)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999987 9999999998765432 1469999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++.+||+||+.++........ .+....+.++++.+||++..+..+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKSV----------------------------------KEAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh-
Confidence 889999999988643221100 001123466889999987666544
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+.|||||||||+||++|+.+|++++|||||+|||..+...+.+.|+++++..+.| |+.++|+..++. .+|+|++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~t-ii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTS-FLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCE-EEEEeCCHHHHh-hcCEEEE
Confidence 4799999999999999999999999999999999999999999999886533445 455667766664 5799999
Q ss_pred ecCCeEE
Q 000556 398 LSDGQIV 404 (1426)
Q Consensus 398 L~~G~iv 404 (1426)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 300
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6.9e-34 Score=323.75 Aligned_cols=205 Identities=23% Similarity=0.355 Sum_probs=170.4
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-----------ccceEEEecC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-----------PERTAAYISQ 233 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----------~~~~~~yv~Q 233 (1426)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q 92 (250)
T PRK11264 16 QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQ 92 (250)
T ss_pred eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEec
Confidence 35899999999999999999999999999999999999887 999999998875321 1357899999
Q ss_pred CCCCCCCCCHHHHHHHhhhh-cCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccc
Q 000556 234 HDNHIGEMTVRETLAFSARC-QGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCA 312 (1426)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1426)
++.+++.+||+||+.++... ++. .. .+....++.+++.+||++..
T Consensus 93 ~~~~~~~~tv~e~l~~~~~~~~~~-~~---------------------------------~~~~~~~~~~l~~~gl~~~~ 138 (250)
T PRK11264 93 NFNLFPHRTVLENIIEGPVIVKGE-PK---------------------------------EEATARARELLAKVGLAGKE 138 (250)
T ss_pred CcccCCCCCHHHHHHHHHHHhcCC-CH---------------------------------HHHHHHHHHHHHHcCCcchh
Confidence 99889899999999875321 110 00 01123456778899998766
Q ss_pred cccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhc
Q 000556 313 DTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLF 392 (1426)
Q Consensus 313 dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~f 392 (1426)
|+.+ +.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ .+|+.++|+.+++.+++
T Consensus 139 ~~~~-----~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~tH~~~~~~~~~ 211 (250)
T PRK11264 139 TSYP-----RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-EK-RTMVIVTHEMSFARDVA 211 (250)
T ss_pred hCCh-----hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHHHhc
Confidence 6544 57999999999999999999999999999999999999999999998864 34 44555788888999999
Q ss_pred CeEEEecCCeEEEecChhhHH
Q 000556 393 DDIILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 393 D~vilL~~G~iv~~G~~~~~~ 413 (1426)
|+|++|++|++++.|+.+++.
T Consensus 212 d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 212 DRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred CEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999988763
No 301
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6.7e-34 Score=321.74 Aligned_cols=205 Identities=19% Similarity=0.334 Sum_probs=170.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-----ccceEEEecCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDNHIG 239 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~ 239 (1426)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++..++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 45999999999999999999999999999999999999887 999999998875421 1356899999998899
Q ss_pred CCCHHHHHHHhhh-hcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 240 EMTVRETLAFSAR-CQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 240 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
.+||+||+.++.. ..+... .+....++++++.+||++..+..+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-- 134 (240)
T PRK09493 91 HLTALENVMFGPLRVRGASK----------------------------------EEAEKQARELLAKVGLAERAHHYP-- 134 (240)
T ss_pred CCcHHHHHHhHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChHHHhcCh--
Confidence 9999999987532 111000 011224567889999987666544
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
+.|||||||||+||+|++.+|++++|||||+|||..+...+.+.|+++.+ .+ ++|+.++|+.+++.+++|+|++|
T Consensus 135 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l 209 (240)
T PRK09493 135 ---SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-EG-MTMVIVTHEIGFAEKVASRLIFI 209 (240)
T ss_pred ---hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 57999999999999999999999999999999999999999999998764 34 45555778888899999999999
Q ss_pred cCCeEEEecChhhHH
Q 000556 399 SDGQIVYQGPRELVL 413 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1426)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999988764
No 302
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-34 Score=323.98 Aligned_cols=219 Identities=20% Similarity=0.263 Sum_probs=176.7
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 904 (1426)
-+.++|+++.+. .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478999998763 2469999999999999999999999999999999999754 21 1479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 979 (1426)
.+... ...++.+||++|++.+++. ||+||+.+....+. ....++..+.++++++.+++.+....... ....
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLH-TQAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhh-CCcc
Confidence 87642 1335679999999888875 99999987643321 11233344567889999998642111111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 231 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GE 231 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999865 799999999986 57789999999985 79
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
++..|+.
T Consensus 232 i~~~g~~ 238 (259)
T PRK14274 232 LVECNDT 238 (259)
T ss_pred EEEECCH
Confidence 9988875
No 303
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.1e-32 Score=355.31 Aligned_cols=123 Identities=24% Similarity=0.289 Sum_probs=102.8
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCC---CeEE
Q 000556 928 FVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQRKRLTIAVELVANP---SIIF 1003 (1426)
Q Consensus 928 ~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p---~iLl 1003 (1426)
.+||.|++.|...++ . .....+.++.+||.. ..+.. ...||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 378999988865432 1 112467899999976 34544 3579999999999999999999 9999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe-----cCcEEEEEcCC
Q 000556 1004 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK-----RGGQEIYVGPL 1066 (1426)
Q Consensus 1004 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~-----~gg~~v~~G~~ 1066 (1426)
|||||+|||+.+...+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999985 446899999994 57899999975
No 304
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-34 Score=322.78 Aligned_cols=218 Identities=19% Similarity=0.259 Sum_probs=174.3
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCC--Cc-eEEEEEEEcCcc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISGYP 906 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g~~ 906 (1426)
+++|+++.++ .+.+|+|+||+|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|.+
T Consensus 7 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~ 73 (251)
T PRK14244 7 SVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGID 73 (251)
T ss_pred EeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEe
Confidence 5677777663 2469999999999999999999999999999999999754 11 258999999987
Q ss_pred CCcc-----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000556 907 KKQE-----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGL 981 (1426)
Q Consensus 907 ~~~~-----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 981 (1426)
+... ..++.++|++|++.+++. |+.||+.+....+. ........++.++++++.+++.+........ .+..|
T Consensus 74 i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~L 150 (251)
T PRK14244 74 VYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFEL 150 (251)
T ss_pred hHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhC
Confidence 5321 245678999999888875 99999987643331 1112233445688999999997532211111 14689
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEE
Q 000556 982 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1426)
Q Consensus 982 SgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v 1061 (1426)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |+++
T Consensus 151 S~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~ 227 (251)
T PRK14244 151 SGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIV 227 (251)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEE
Confidence 9999999999999999999999999999999999999999999985 4899999999986 57788999999986 7898
Q ss_pred EEcCC
Q 000556 1062 YVGPL 1066 (1426)
Q Consensus 1062 ~~G~~ 1066 (1426)
+.|+.
T Consensus 228 ~~~~~ 232 (251)
T PRK14244 228 EYNTT 232 (251)
T ss_pred EeCCH
Confidence 88874
No 305
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=331.43 Aligned_cols=222 Identities=19% Similarity=0.235 Sum_probs=180.7
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCC---ceEEEEEEEc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITIS 903 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 903 (1426)
..+.++|+++.+.. +.+.+|+|||++|++||++||+|+||||||||+++|+|.... .+.+|+|.+|
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 36899999988742 124599999999999999999999999999999999997532 2357999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000556 904 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1426)
Q Consensus 904 g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 978 (1426)
|.++.. ...++.++||+|++.+++ .|++||+.|..... ...+.+..++.++++++.++|.+..++.++.. .
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~--~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~-~ 223 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN--GINDRKILEKIVEKSLKSAALWDEVKDDLDKA-G 223 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc--CCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-c
Confidence 998752 234667999999998875 79999999864321 11112223445788899998865444444433 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
.+||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999875 799999999986 46778999999985 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
+++..|+.
T Consensus 301 ~i~e~g~~ 308 (329)
T PRK14257 301 WIEEAGET 308 (329)
T ss_pred EEEEeCCH
Confidence 99999986
No 306
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=322.45 Aligned_cols=215 Identities=21% Similarity=0.246 Sum_probs=176.7
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 904 (1426)
-+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 367889887763 246999999999999999999999999999999999975421 2579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 975 (1426)
.++.. ...++.++|++|++.+++ .|++||+.|...... ........++++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHG--IKDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87642 123566899999998887 899999988654321 1122344456788999998853 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
...||+|||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 468999999999999999999999999999999999999999999999876 699999999986 5788899999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 5 789998875
No 307
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=321.99 Aligned_cols=215 Identities=21% Similarity=0.300 Sum_probs=175.8
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 904 (1426)
.+.++|+++.++ .+.+|+|+||+|++||+++|+|+||||||||+++|+|..... +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 478899988773 235999999999999999999999999999999999964321 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 975 (1426)
.++.. ...++.++|++|++.+++ .|++||+.+....+. ..+.+..++.++++++.+++.+ ..++.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHG--IKDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87642 124567899999988887 899999988654321 1122334566888899998753 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK-DYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 468999999999999999999999999999999999999999999999854 899999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
+ |+++..|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 6 788888864
No 308
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=321.90 Aligned_cols=218 Identities=23% Similarity=0.332 Sum_probs=176.2
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISGY 905 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 905 (1426)
++++|+++.+. ++.+|+|+||++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67889888763 236999999999999999999999999999999999975421 25899999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000556 906 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 980 (1426)
Q Consensus 906 ~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 980 (1426)
++.. ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+..+.... ..+.+
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~ 146 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELN-KPGTR 146 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHh-CChhh
Confidence 7642 123567999999998887 899999987653321 11223344567889999998643211111 12468
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEE
Q 000556 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1426)
Q Consensus 981 LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~ 1060 (1426)
||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|++ |++
T Consensus 147 LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i 223 (250)
T PRK14262 147 LSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GEL 223 (250)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 799999999986 57788999999986 788
Q ss_pred EEEcCC
Q 000556 1061 IYVGPL 1066 (1426)
Q Consensus 1061 v~~G~~ 1066 (1426)
+..|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14262 224 IEYGPT 229 (250)
T ss_pred EEecCH
Confidence 888874
No 309
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=323.56 Aligned_cols=216 Identities=22% Similarity=0.296 Sum_probs=178.0
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc-e--EEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-Y--ITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~--~~G~i~i~g 904 (1426)
.+.++|+++.++ +..+|+|+|+++++||+++|+|+||||||||+++|+|..++. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478999988773 235999999999999999999999999999999999975532 1 479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 975 (1426)
.++.. ...++.++|++|++.+++ .|++||+.+....+. ..+....++.++++++.+++.+ ..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 123557999999998887 899999987654331 1223334456788999998853 33332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 468999999999999999999999999999999999999999999999865 699999999997 6889999999997
Q ss_pred c----CcEEEEEcCC
Q 000556 1056 R----GGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~----gg~~v~~G~~ 1066 (1426)
. .|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4899999885
No 310
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.7e-34 Score=368.43 Aligned_cols=210 Identities=25% Similarity=0.404 Sum_probs=177.1
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++|+||++.+. +++++|+|+|++++||+++||+|+||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3699999987542 1246999999999999999999999999999999999987 4 37999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 976 (1426)
+.+ ..+++.++||+|++.++. -|++||+.++. | +.++ +.++++++..++.+. .|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~----~-~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN----P-DASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC----C-CCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 754 456788999999999886 59999998752 1 2232 346777887777653 46777765
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
| .+||||||||++|||||+++|+||+||||||+||+.++..|++.|+++. +++|+|+++|+++ ..+.+|+|++|++
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 4 5799999999999999999999999999999999999999999999885 5899999999985 5678999999985
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 799988874
No 311
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=9.8e-34 Score=319.16 Aligned_cols=202 Identities=25% Similarity=0.301 Sum_probs=166.5
Q ss_pred ccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC--CccceEEEec-CCCCCCC
Q 000556 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF--VPERTAAYIS-QHDNHIG 239 (1426)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~ 239 (1426)
..+++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.+.... ..++.++|++ |++.+++
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 4467999999999999999999999999999999999999987 99999999875432 1235789997 5566778
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000556 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1426)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1426)
.+||+||+.+.....+... .+....++.+++.+||++..|+.++
T Consensus 109 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-- 152 (236)
T cd03267 109 DLPVIDSFYLLAAIYDLPP----------------------------------ARFKKRLDELSELLDLEELLDTPVR-- 152 (236)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhcCChh--
Confidence 9999999988654322100 0011235667889999988887664
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ .+|+.++|+.+++.+++|++++|+
T Consensus 153 ---~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiiivsH~~~~~~~~~d~i~~l~ 228 (236)
T cd03267 153 ---QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRERG-TTVLLTSHYMKDIEALARRVLVID 228 (236)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCC-CEEEEEecCHHHHHHhCCEEEEEe
Confidence 6999999999999999999999999999999999999999999999865334 445557788788899999999999
Q ss_pred CCeEEEec
Q 000556 400 DGQIVYQG 407 (1426)
Q Consensus 400 ~G~iv~~G 407 (1426)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 312
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-34 Score=327.65 Aligned_cols=216 Identities=25% Similarity=0.378 Sum_probs=174.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCC-CCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1426)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 34899999999999999999999999999999999999998 9999999998865432 357999999973 6777
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
+||+||+.++.+..+... .+....++++++.+||++..++.+
T Consensus 97 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~---- 138 (279)
T PRK13635 97 ATVQDDVAFGLENIGVPR----------------------------------EEMVERVDQALRQVGMEDFLNREP---- 138 (279)
T ss_pred ccHHHHHhhhHhhCCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc----
Confidence 899999988654321100 011234677899999988777655
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++... +++|+.++|+.+++. .+|+|++|++
T Consensus 139 -~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~-~~tilivsH~~~~~~-~~d~i~~l~~ 215 (279)
T PRK13635 139 -HRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQK-GITVLSITHDLDEAA-QADRVIVMNK 215 (279)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcC-CCEEEEEecCHHHHH-cCCEEEEEEC
Confidence 4699999999999999999999999999999999999999999999986533 444555667777775 5999999999
Q ss_pred CeEEEecChhhHHH---HHHhcCCCCC
Q 000556 401 GQIVYQGPRELVLE---FFESMGFKCP 424 (1426)
Q Consensus 401 G~iv~~G~~~~~~~---~F~~~Gf~cp 424 (1426)
|++++.|+.+++.. .+...|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999987653 3344455443
No 313
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=8e-34 Score=325.71 Aligned_cols=223 Identities=20% Similarity=0.267 Sum_probs=179.6
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.+..+.. +...+.+.+|+|+|+++++||++||+|||||||||||++|+|..++ .+|+|.++|.++.
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEP--TSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 789999988742110 0000124699999999999999999999999999999999998763 4899999998764
Q ss_pred cc---cccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCC
Q 000556 909 QE---TFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 909 ~~---~~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LS 982 (1426)
.. ..++.++|++|++. +.+.+|+.|++.+....+. ........+.++++++.++|. +..+.. +..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcC
Confidence 31 22356899999975 5677899999987654432 123334445688999999994 555554 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1061 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v 1061 (1426)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 57778999999985 7888
Q ss_pred EEcCC
Q 000556 1062 YVGPL 1066 (1426)
Q Consensus 1062 ~~G~~ 1066 (1426)
..|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 88764
No 314
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=8.9e-34 Score=309.61 Aligned_cols=190 Identities=47% Similarity=0.837 Sum_probs=162.1
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCC--CCceEEEEEEEcCc
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRK--TGGYITGNITISGY 905 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~--~~~~~~G~i~i~g~ 905 (1426)
.+.++|+++.++.... ...+.+|+|+|+++++||+++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~~-------~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSPS-------KSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCCC-------cccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 4789999988752100 01246999999999999999999999999999999999986 5 45899999998
Q ss_pred cCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000556 906 PKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1426)
Q Consensus 906 ~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 985 (1426)
+......++.++|++|++.+++.+|++||+.+...++ .||+||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8764445677999999998888999999997642110 499999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 986 rqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
|||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999999877999999999987567888999999986 7877654
No 315
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=7.2e-34 Score=337.90 Aligned_cols=194 Identities=24% Similarity=0.384 Sum_probs=169.1
Q ss_pred eeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000556 859 GLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 931 (1426)
Q Consensus 859 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~lTv 931 (1426)
|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRP--DEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 99999999999999999999999999999998663 47999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000556 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1011 (1426)
Q Consensus 932 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgL 1011 (1426)
+||+.|..... .....+++++++++.++|.+..++.+ ..|||||||||+|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 12234456899999999998888764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1012 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1012 D~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
|+.++..+++.|++++++ |+|||+++|++. ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999875 899999999986 57888999999986 789998875
No 316
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-34 Score=315.53 Aligned_cols=191 Identities=23% Similarity=0.381 Sum_probs=163.2
Q ss_pred eeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000556 859 GLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 931 (1426)
Q Consensus 859 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~lTv 931 (1426)
|||+++++ |+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKP--DGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 99999999999999999999998653 48999999987532 1235578999999988889999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000556 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1011 (1426)
Q Consensus 932 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgL 1011 (1426)
.||+.+..... .....+++++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 1223445688999999998777665 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 1012 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 1012 D~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
|+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999775 899999999986 47788999999986 6877654
No 317
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=324.02 Aligned_cols=220 Identities=22% Similarity=0.258 Sum_probs=178.0
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCC---ceEEEEEEEc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITIS 903 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 903 (1426)
..++++|+++.+. ++.+|+|+||+|++||+++|+|+||||||||+++|+|.... .+.+|+|.++
T Consensus 24 ~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~ 90 (272)
T PRK14236 24 TALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLD 90 (272)
T ss_pred cEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEEC
Confidence 3589999998873 23699999999999999999999999999999999998542 1358999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000556 904 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1426)
Q Consensus 904 g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 978 (1426)
|.+... ..+++.++|++|++.+++. |++||+.+....+. ....+..++.++++++.+++.+........ .+
T Consensus 91 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~ 166 (272)
T PRK14236 91 GQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHE-NA 166 (272)
T ss_pred CEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhC-Cc
Confidence 987642 1345679999999888875 99999987654321 112223345688899999986421111111 14
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |
T Consensus 167 ~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G 243 (272)
T PRK14236 167 FGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM-G 243 (272)
T ss_pred ccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999975 799999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
+++..|+.
T Consensus 244 ~i~~~g~~ 251 (272)
T PRK14236 244 KLVEYGDT 251 (272)
T ss_pred EEEecCCH
Confidence 89988875
No 318
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-34 Score=336.94 Aligned_cols=190 Identities=24% Similarity=0.390 Sum_probs=167.2
Q ss_pred eeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000556 859 GLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 931 (1426)
Q Consensus 859 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~lTv 931 (1426)
|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+... ...++.++|++|+..++|.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRP--QKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 89999999999999999999999999999998663 48999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000556 932 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1011 (1426)
Q Consensus 932 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgL 1011 (1426)
+||+.|... ...++.++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 112345889999999998887764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1012 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1012 D~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
|+.++..+++.|+++.++ |+|||+++|++. ++...+|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999999775 899999999986 68899999999985 799999875
No 319
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=321.42 Aligned_cols=219 Identities=23% Similarity=0.256 Sum_probs=175.9
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 904 (1426)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 367888887763 246999999999999999999999999999999999975531 3579999999
Q ss_pred ccCCc----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000556 905 YPKKQ----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 980 (1426)
Q Consensus 905 ~~~~~----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 980 (1426)
.++.. ...++.++|++|++.+++ .||.||+.+...... ....+...+.++++++.+++.+........ ....
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKS-HAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhc-Cccc
Confidence 87531 234567999999998887 899999987643221 112233345678888888885422111111 1458
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEE
Q 000556 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1426)
Q Consensus 981 LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~ 1060 (1426)
||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999975 699999999986 57888999999986 789
Q ss_pred EEEcCC
Q 000556 1061 IYVGPL 1066 (1426)
Q Consensus 1061 v~~G~~ 1066 (1426)
+..|+.
T Consensus 223 ~~~g~~ 228 (249)
T PRK14253 223 VEHDDT 228 (249)
T ss_pred EEeCCH
Confidence 988874
No 320
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-34 Score=315.99 Aligned_cols=197 Identities=31% Similarity=0.436 Sum_probs=165.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--ccceEEEecCCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1426)
.++|+|+|+++++| +++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 36999999999999 99999999999999999999999987 999999998875432 2357899999998999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
|+||+.+.....+... .+....++.+++.+||++..++.+ .
T Consensus 89 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 129 (211)
T cd03264 89 VREFLDYIAWLKGIPS----------------------------------KEVKARVDEVLELVNLGDRAKKKI-----G 129 (211)
T ss_pred HHHHHHHHHHHhCCCH----------------------------------HHHHHHHHHHHHHCCCHHHHhCch-----h
Confidence 9999988654321100 001224567889999987777655 4
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|++++. + ++|+.++|+..++.+++|++++|++|+
T Consensus 130 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 130 SLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGK 206 (211)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998753 3 556667888888889999999999999
Q ss_pred EEEec
Q 000556 403 IVYQG 407 (1426)
Q Consensus 403 iv~~G 407 (1426)
+++.|
T Consensus 207 i~~~g 211 (211)
T cd03264 207 LVFEG 211 (211)
T ss_pred EEecC
Confidence 98765
No 321
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-34 Score=328.21 Aligned_cols=207 Identities=25% Similarity=0.329 Sum_probs=170.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCC--CC---ccceEEEecCCCC-CC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGE--FV---PERTAAYISQHDN-HI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~~---~~~~~~yv~Q~d~-~~ 238 (1426)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .. .++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 35899999999999999999999999999999999999987 9999999998741 11 2357999999863 34
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
...||+||+.++....+... .+....++.+++.+||.+..++.+
T Consensus 96 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 139 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKLPE----------------------------------DEVRKRVDNALKRTGIEHLKDKPT-- 139 (283)
T ss_pred ccccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhCCc--
Confidence 56899999988643221100 011234677889999987766554
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.++||+|++|
T Consensus 140 ---~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tillvsH~~~~~~~~~dri~~l 215 (283)
T PRK13636 140 ---HCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELG-LTIIIATHDIDIVPLYCDNVFVM 215 (283)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCC-CEEEEEecCHHHHHHhCCEEEEE
Confidence 57999999999999999999999999999999999999999999999875334 45555788888898999999999
Q ss_pred cCCeEEEecChhhHHH
Q 000556 399 SDGQIVYQGPRELVLE 414 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1426)
++|++++.|+.+++..
T Consensus 216 ~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 216 KEGRVILQGNPKEVFA 231 (283)
T ss_pred ECCEEEEeCCHHHHhc
Confidence 9999999999988753
No 322
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.1e-32 Score=312.15 Aligned_cols=173 Identities=24% Similarity=0.305 Sum_probs=136.8
Q ss_pred eeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHH
Q 000556 857 LNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLL 936 (1426)
Q Consensus 857 L~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~ 936 (1426)
|.==.++|..||+++++||||-||||+.++|||..++. +|+ .. .-.++|-||--.-....||++-|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPd--eg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPD--EGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhccccCC--CCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 44445788899999999999999999999999976643 554 10 123677788655556789999875
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHH
Q 000556 937 YSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1016 (1426)
Q Consensus 937 f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~ 1016 (1426)
-...-+.. ...+..++++-++|++..+..+ .+|||||.|||+||.+|.+++++.+||||++.||++.+
T Consensus 424 ~~~~~~~~-------~s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFG-------SSYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhcc-------cchhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 43222111 1123467888999999999885 58999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 1017 AIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 1017 ~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
..+-+.||+...+ ++|.+++-||... +--..||+++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 9999999998764 8999999999753 445678888875
No 323
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-34 Score=321.30 Aligned_cols=206 Identities=21% Similarity=0.341 Sum_probs=170.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++....+ ++.++|++|++..++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999999887 9999999988765432 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
+||+||+.+..+....... .+....++.+++.+||++..+..
T Consensus 93 ~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 134 (241)
T PRK10895 93 LSVYDNLMAVLQIRDDLSA---------------------------------EQREDRANELMEEFHIEHLRDSM----- 134 (241)
T ss_pred CcHHHHHhhhhhcccccCH---------------------------------HHHHHHHHHHHHHcCCHHHhhcc-----
Confidence 9999999875432110000 01123456788999998765544
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
++.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. .+. +|+.++|+..++.+++|+|++|++
T Consensus 135 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~-tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 135 GQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGL-GVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCC-EEEEEEcCHHHHHHhcCEEEEEeC
Confidence 457999999999999999999999999999999999999999999998754 344 455567777889999999999999
Q ss_pred CeEEEecChhhHH
Q 000556 401 GQIVYQGPRELVL 413 (1426)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1426)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988764
No 324
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=322.08 Aligned_cols=221 Identities=22% Similarity=0.271 Sum_probs=178.9
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 904 (1426)
.++++|+++.+. ...+|+|+||++++||+++|+|+||||||||+++|+|...+. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 488999998873 235999999999999999999999999999999999976532 1369999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 979 (1426)
.++.. ...++.++|++|+..+++ .|+.||+.+...... ..+..+.++.+.++++.+++.+..+...+. .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87531 134567899999988888 899999987643321 112223345688999999986532222221 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEecC-
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRG- 1057 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g- 1057 (1426)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ .|+|||+++|++. ++.+.+|++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 8999999999999999999999999999999999999999999999865 4899999999986 588899999999863
Q ss_pred ---cEEEEEcCC
Q 000556 1058 ---GQEIYVGPL 1066 (1426)
Q Consensus 1058 ---g~~v~~G~~ 1066 (1426)
|++++.|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 899999885
No 325
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=326.05 Aligned_cols=216 Identities=23% Similarity=0.289 Sum_probs=180.1
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++.. ....+|+|||+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 47899999887421 12359999999999999999999999999999999999876 3579999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 908 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
.. ...++.+||++|++. .++..||.||+.+..... ....+...++++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 234567999999974 566789999998764422 123334445688999999998877775 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++.. + ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 9999999999863 4 46999999986 78888
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8875
No 326
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=321.80 Aligned_cols=201 Identities=26% Similarity=0.370 Sum_probs=167.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1426)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... .+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHH
Confidence 45899999999999999999999999999999999999987 99999999887542 34589999999888899999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 000556 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1426)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1426)
||+.++....+... .+....++.+++.+||++..++.+ ..|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 129 (255)
T PRK11248 89 DNVAFGLQLAGVEK----------------------------------MQRLEIAHQMLKKVGLEGAEKRYI-----WQL 129 (255)
T ss_pred HHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hhC
Confidence 99988643221100 001124567889999987666544 479
Q ss_pred ChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec--CCe
Q 000556 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1426)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~--~G~ 402 (1426)
||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQET-GKQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 9999999999999999999999999999999999999999999875433 4445557888889999999999998 599
Q ss_pred EEEecChh
Q 000556 403 IVYQGPRE 410 (1426)
Q Consensus 403 iv~~G~~~ 410 (1426)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99988653
No 327
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=330.87 Aligned_cols=208 Identities=20% Similarity=0.243 Sum_probs=174.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCC--C
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHD--N 236 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1426)
..+|+|||++|++||+++|+|+||||||||+++|+|.++++ +|+|.++|.++..... ++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 56999999999999999999999999999999999999887 9999999998765432 35799999997 5
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc-ccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV-CADTM 315 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1426)
+.+.+||.+++........... ..+....+.++++.+||+. ..++
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~gL~~~~~~~- 150 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSLS---------------------------------AAERREKALAMMAKVGLRPEHYDR- 150 (327)
T ss_pred cCCccCHHHHHHHHHHHccCCC---------------------------------HHHHHHHHHHHHHHCCCChHHhcC-
Confidence 8889999999987544321000 0012235678899999963 4554
Q ss_pred ccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 316 vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
.++.|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 151 ----~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 151 ----YPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred ----CCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 45579999999999999999999999999999999999999999999998653 3556666899999999999999
Q ss_pred EEecCCeEEEecChhhHHH
Q 000556 396 ILLSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1426)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999988753
No 328
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=9.5e-34 Score=318.48 Aligned_cols=202 Identities=25% Similarity=0.341 Sum_probs=166.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 46999999999999999999999999999999999999987 9999999988764432 3469999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhC-CcccccccccCc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LEVCADTMVGDE 319 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vG~~ 319 (1426)
+||+||+.++....+.. .....+.+++.++ +.+..++.
T Consensus 90 ~tv~~~l~~~~~~~~~~-------------------------------------~~~~~~~~l~~~~~l~~~~~~~---- 128 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR-------------------------------------SRKIPDEIYELFPVLKEMLGRR---- 128 (230)
T ss_pred CcHHHHHHHHHHhcCcc-------------------------------------hHHHHHHHHHHHHhHHHHhhCC----
Confidence 99999998865322100 0011244556665 44444443
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
++.||||||||++||++|+.+|++++|||||+|||+.+..++.+.|+++++. .+++|+.++|+.+++.+++|+|++|+
T Consensus 129 -~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 129 -GGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVME 206 (230)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4579999999999999999999999999999999999999999999987653 24455557788888999999999999
Q ss_pred CCeEEEecChhhH
Q 000556 400 DGQIVYQGPRELV 412 (1426)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1426)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998775
No 329
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-34 Score=337.19 Aligned_cols=195 Identities=24% Similarity=0.362 Sum_probs=168.7
Q ss_pred cceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC-------CccceEEEecCCCCCCCCCC
Q 000556 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF-------VPERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1426)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|+..+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999988 99999999886531 12467999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
|+||+.|+.+.. ....++.+++.+||++..+..+ +
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999998853200 0123567889999987777554 4
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++.+++|+|++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREI-NIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 799999999999999999999999999999999999999999999987543 4555668888899999999999999999
Q ss_pred EEEecChhhHH
Q 000556 403 IVYQGPRELVL 413 (1426)
Q Consensus 403 iv~~G~~~~~~ 413 (1426)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999875
No 330
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-34 Score=322.64 Aligned_cols=194 Identities=21% Similarity=0.284 Sum_probs=164.6
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHH
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRE 245 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1426)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 5899999999999999999999999999999999999987 9999999976543 2457999999998888899999
Q ss_pred HHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCC
Q 000556 246 TLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGIS 325 (1426)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LS 325 (1426)
|+.++... . ....++.+++.+||.+..+..+ ..||
T Consensus 101 nl~~~~~~-----~-----------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~~LS 135 (257)
T PRK11247 101 NVGLGLKG-----Q-----------------------------------WRDAALQALAAVGLADRANEWP-----AALS 135 (257)
T ss_pred HHHhcccc-----h-----------------------------------HHHHHHHHHHHcCChhHhcCCh-----hhCC
Confidence 99874210 0 0112456788999987666544 5799
Q ss_pred hhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEE
Q 000556 326 GGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1426)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~ 405 (1426)
|||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+..+.| |+.++|+..++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~t-viivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFT-VLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999999999999999999999999876543444 5557888888889999999999999999
Q ss_pred ecChh
Q 000556 406 QGPRE 410 (1426)
Q Consensus 406 ~G~~~ 410 (1426)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 331
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=324.20 Aligned_cols=205 Identities=25% Similarity=0.357 Sum_probs=167.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC---ccceEEEecCCCC-CCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV---PERTAAYISQHDN-HIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1426)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999999987 999999999876432 2457999999963 6778
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
+||+||+.++....+... .+....++++++.+||++..++.+
T Consensus 99 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 140 (271)
T PRK13632 99 ATVEDDIAFGLENKKVPP----------------------------------KKMKDIIDDLAKKVGMEDYLDKEP---- 140 (271)
T ss_pred ccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCc----
Confidence 999999988643211100 011234577889999987777655
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+. ++++|+.++|..+++. .+|+|++|++
T Consensus 141 -~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~ 217 (271)
T PRK13632 141 -QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSE 217 (271)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEEC
Confidence 479999999999999999999999999999999999999999999998653 3344444566666664 7999999999
Q ss_pred CeEEEecChhhHH
Q 000556 401 GQIVYQGPRELVL 413 (1426)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1426)
|++++.|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 332
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6e-33 Score=309.71 Aligned_cols=202 Identities=19% Similarity=0.307 Sum_probs=152.3
Q ss_pred CCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcC
Q 000556 825 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG 904 (1426)
Q Consensus 825 ~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 904 (1426)
.|..+-.+||+|.++ +.++++++++|-|.--..+||+||||.||||||++|.|..++ ..|+.+-|
T Consensus 583 ~PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn- 647 (807)
T KOG0066|consen 583 NPPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN- 647 (807)
T ss_pred CCCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc-
Confidence 345678889998875 346799999999999999999999999999999999998764 35655432
Q ss_pred ccCCcccccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 905 YPKKQETFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 905 ~~~~~~~~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
.+-.+|+..|... +-..-|.-|.|.-. .. .+.++ ....|..+||...++++- ++.||
T Consensus 648 -------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~--FN----lpyq~----ARK~LG~fGL~sHAHTik----ikdLS 706 (807)
T KOG0066|consen 648 -------HRLRIGWFDQHANEALNGEETPVEYLQRK--FN----LPYQE----ARKQLGTFGLASHAHTIK----IKDLS 706 (807)
T ss_pred -------ceeeeechhhhhHHhhccccCHHHHHHHh--cC----CChHH----HHHHhhhhhhhhccceEe----eeecC
Confidence 2335787777532 23345666766421 11 22222 456788999999988873 57899
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
||||-||++|.--++.|+||||||||++||..+...+-++|++. ...||+++|+-.. |.+.-..++|+.+.|.--.
T Consensus 707 GGQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eI 782 (807)
T KOG0066|consen 707 GGQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEI 782 (807)
T ss_pred CcchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhc
Confidence 99999999999999999999999999999999999999999876 4679999999764 4455557777766554334
Q ss_pred EcCC
Q 000556 1063 VGPL 1066 (1426)
Q Consensus 1063 ~G~~ 1066 (1426)
.|..
T Consensus 783 dGdF 786 (807)
T KOG0066|consen 783 DGDF 786 (807)
T ss_pred cccH
Confidence 4543
No 333
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-34 Score=328.32 Aligned_cols=205 Identities=23% Similarity=0.337 Sum_probs=169.3
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-------ccceEEEecCCCC-
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDN- 236 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 236 (1426)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45899999999999999999999999999999999999998 999999999875321 1346899999862
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTM 315 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1426)
.+..+||+||+.|+....+... .+....++.+++.+||+ +..++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFSE----------------------------------DEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 3446899999988653221100 01122456789999996 455554
Q ss_pred ccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 316 vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++.. . +++|+.++|+.+++.++||+|
T Consensus 143 ~-----~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 P-----FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-A-GHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEE
Confidence 4 47999999999999999999999999999999999999999999998753 3 555666888999999999999
Q ss_pred EEecCCeEEEecChhhHH
Q 000556 396 ILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1426)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 334
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=353.26 Aligned_cols=218 Identities=25% Similarity=0.321 Sum_probs=183.4
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|++++++ ++.+|+|+||++++||++||+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 78899988773 24699999999999999999999999999999999998763 4799999998764
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 909 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 909 ~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
.. ..++.++|++|++.+++.+||+|++.+....+.. ...+....++.++++++.++|.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 21 1235689999999888999999999886432211 11223334456889999999998877764 47999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~ 1063 (1426)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|.|||+++|++. ++.+.+|++++|++ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 57789999999985 789988
Q ss_pred cCCCc
Q 000556 1064 GPLGR 1068 (1426)
Q Consensus 1064 G~~~~ 1068 (1426)
|+..+
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 88753
No 335
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=9.8e-34 Score=318.14 Aligned_cols=201 Identities=25% Similarity=0.340 Sum_probs=166.9
Q ss_pred EeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc--eEEEEEEEcCccCCcccc-cceEEEeccCCC--CCCCCC
Q 000556 856 LLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG--YITGNITISGYPKKQETF-ARISGYCEQNDI--HSPFVT 930 (1426)
Q Consensus 856 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~q~~~--~~~~lT 930 (1426)
+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 479999999999999999999999999999999986531 158999999987654322 357899999984 557789
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc---ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCC
Q 000556 931 VYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK---PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1007 (1426)
Q Consensus 931 v~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~---~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEP 1007 (1426)
+.|++.+...... . .....++.++++++.+++. +..+.. +..|||||||||+||++|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG--K-LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC--c-cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543321 1 1233345689999999998 344544 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1008 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1008 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
|+|||+.+...+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999764 899999999987 57788999999985 788888874
No 336
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=8.7e-34 Score=315.26 Aligned_cols=195 Identities=26% Similarity=0.376 Sum_probs=163.0
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC------ccceEEEecCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHDNHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1426)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 45999999999999999999999999999999999999887 999999999876432 135699999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+.+||+||+.+.....+... .+....++++++.+||++..++.+
T Consensus 91 ~~~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (214)
T cd03292 91 PDRNVYENVAFALEVTGVPP----------------------------------REIRKRVPAALELVGLSHKHRALP-- 134 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCh--
Confidence 99999999988654322100 001123567888999987766554
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
+.||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++.+ .+ ++|+.++|+.+++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~-~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 135 ---AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-AG-TTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred ---hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999998754 34 45555778888888999999999
Q ss_pred cCCeE
Q 000556 399 SDGQI 403 (1426)
Q Consensus 399 ~~G~i 403 (1426)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 337
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2e-33 Score=321.24 Aligned_cols=215 Identities=25% Similarity=0.265 Sum_probs=175.6
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc-
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP- 906 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~- 906 (1426)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAP--DAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCccc
Confidence 478999988773 23599999999999999999999999999999999998653 47999999987
Q ss_pred ----CCcc---c----ccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000556 907 ----KKQE---T----FARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSL 972 (1426)
Q Consensus 907 ----~~~~---~----~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 972 (1426)
+... . .++.++|++|++. +.+.+|+.|++.+...... ........+.++++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346899999974 5677899999876432111 1122234556889999999974 55554
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceE
Q 000556 973 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDEL 1051 (1426)
Q Consensus 973 vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v 1051 (1426)
+..||||||||++|||+|+.+|+||+|||||+|||+.+...+.+.|++++++ |.|||+++|++. .+.+.+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998765 899999999986 466789999
Q ss_pred EEEecCcEEEEEcCC
Q 000556 1052 FLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1052 ~ll~~gg~~v~~G~~ 1066 (1426)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 799998875
No 338
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=319.39 Aligned_cols=216 Identities=24% Similarity=0.283 Sum_probs=175.7
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCce---EEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGY---ITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~---~~G~i~i~g 904 (1426)
-+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 467888887763 2469999999999999999999999999999999999764322 379999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 975 (1426)
.++.. ..+++.++|++|++.+++.+|+.||+.+...... ....+...+.++++++.+++.+ ..++.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87642 1345678999999999998999999987543221 1122333455677777777643 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999864 799999999987 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 789988875
No 339
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-33 Score=314.01 Aligned_cols=224 Identities=22% Similarity=0.308 Sum_probs=181.9
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCC-C--ceEEEEEEEcCc
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT-G--GYITGNITISGY 905 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~-~--~~~~G~i~i~g~ 905 (1426)
++.+|++.++.... +...+++||||++++||++||+|.|||||||+.++|.|..+ + ...+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~~---------g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTDA---------GVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecCC---------ccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 46778877665421 24579999999999999999999999999999999999765 2 356789999998
Q ss_pred cCCc---cc----ccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000556 906 PKKQ---ET----FARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLP 976 (1426)
Q Consensus 906 ~~~~---~~----~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 976 (1426)
++-. .. +-+.+++++|++. +.|.+||.+.+.-......... ..++..+++.++|+.+||.+.....- .
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~--~ 149 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLK--S 149 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHh--h
Confidence 6432 11 2347999999975 5688999887765444322111 34556677899999999987533221 1
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
.+.+|||||||||.||.||+.+|++|+.||||++||...++.|+++|+++.+ .|.|+|++|||.. -+.+.+|||.||.
T Consensus 150 YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY 228 (316)
T COG0444 150 YPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY 228 (316)
T ss_pred CCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE
Confidence 2468999999999999999999999999999999999999999999999986 5999999999997 4889999999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
. |++|..|+.
T Consensus 229 a-G~iVE~g~~ 238 (316)
T COG0444 229 A-GRIVEEGPV 238 (316)
T ss_pred C-cEEEEeCCH
Confidence 5 899999996
No 340
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=319.14 Aligned_cols=219 Identities=20% Similarity=0.242 Sum_probs=175.5
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 904 (1426)
.+.++|+++.+. ++.+|+|+|++|++|++++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 377889888763 235999999999999999999999999999999999976532 2369999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 979 (1426)
.+... ...++.++|++|++.+++. |++||+.+....+.. ...+..++.++++++.+++.+....... ....
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLH-KSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhh-CCcc
Confidence 87532 1345679999999988875 999999886543311 1122234557788888887542221111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 899999999999999999999999999999999999999999999985 5899999999986 57788999999985 78
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 8888875
No 341
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2e-33 Score=313.57 Aligned_cols=211 Identities=23% Similarity=0.345 Sum_probs=175.7
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|+++.+... .+.+.+|+|+||++++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5678888776310 012569999999999999999999999999999999999865 35899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 909 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 909 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
.. ..++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.++|.+..++.+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCC
Confidence 21 235679999999988888999999988654321 1233444567899999999988777763 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHhhcceEEEEecCcEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~ 1060 (1426)
+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+.+|++++|++ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999876 4899999999985 4689999999986 553
No 342
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.5e-33 Score=312.90 Aligned_cols=202 Identities=23% Similarity=0.276 Sum_probs=173.0
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ ++.+++++|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 488999987763 23599999999999999999999999999999999998663 479999999876
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000556 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 987 (1426)
.....++.++|++|++.+++.+|+.|++.+....+. .. .++.++++++.++|.+..++.+ ..||+||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543344568999999988888999999987654321 11 2235678999999988777764 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 988 Rl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
|++||++++.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++..
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~~ 212 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLEA 212 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEee
Confidence 999999999999999999999999999999999999998888999999999997 68899999999863
No 343
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=317.29 Aligned_cols=201 Identities=24% Similarity=0.371 Sum_probs=166.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++ .
T Consensus 16 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~ 91 (241)
T PRK14250 16 KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-G 91 (241)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-h
Confidence 35899999999999999999999999999999999999987 9999999988754322 357999999987776 6
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-ccccccccCcc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTMVGDEM 320 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vG~~~ 320 (1426)
||+||+.++....+ . ....++.+++.+||+ +..++ .
T Consensus 92 tv~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~-----~ 128 (241)
T PRK14250 92 TVKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATR-----D 128 (241)
T ss_pred hHHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhC-----C
Confidence 99999987532110 0 011245678889996 34443 3
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
+..||||||||++||+|++.+|++++|||||+|||+.+...+.+.|+++....+. +|+.++|+.+++.+++|+|++|++
T Consensus 129 ~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~-tii~~sH~~~~~~~~~d~i~~l~~ 207 (241)
T PRK14250 129 VKNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNL-TVIWITHNMEQAKRIGDYTAFLNK 207 (241)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCC-EEEEEeccHHHHHHhCCEEEEEeC
Confidence 4579999999999999999999999999999999999999999999987653344 555578888889999999999999
Q ss_pred CeEEEecChhhHH
Q 000556 401 GQIVYQGPRELVL 413 (1426)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1426)
|+++..|+.+++.
T Consensus 208 G~i~~~~~~~~~~ 220 (241)
T PRK14250 208 GILVEYAKTYDFF 220 (241)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988763
No 344
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.2e-33 Score=335.94 Aligned_cols=199 Identities=24% Similarity=0.402 Sum_probs=169.4
Q ss_pred cceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-------ccceEEEecCCCCCCCCCC
Q 000556 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1426)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 899999999999999999999999999999999987 999999998875321 2457999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
|+||+.|+.+... . .+....++++++.+||++..++.+ +
T Consensus 92 v~enl~~~~~~~~--~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P----------------------------------SERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC--h----------------------------------hHHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999998653210 0 001224567899999988777554 4
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++++.++|+.+++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEF-GIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999987543 4455557888889999999999999999
Q ss_pred EEEecChhhHH
Q 000556 403 IVYQGPRELVL 413 (1426)
Q Consensus 403 iv~~G~~~~~~ 413 (1426)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988764
No 345
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.3e-33 Score=313.69 Aligned_cols=198 Identities=28% Similarity=0.351 Sum_probs=162.6
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1426)
..+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l 99 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFML 99 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEccccc
Confidence 35899999999999999999999999999999999999987 9999999998765432 2469999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++.+||+||+.+.....+... .+....++.+++.+||.+..+..+
T Consensus 100 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 144 (228)
T PRK10584 100 IPTLNALENVELPALLRGESS----------------------------------RQSRNGAKALLEQLGLGKRLDHLP- 144 (228)
T ss_pred CCCcCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCh-
Confidence 999999999988643221100 011234567889999987766554
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++++..+.|+|+ ++|+.+++ +.+|++++
T Consensus 145 ----~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~-~sH~~~~~-~~~d~i~~ 218 (228)
T PRK10584 145 ----AQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIL-VTHDLQLA-ARCDRRLR 218 (228)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEE-EecCHHHH-HhCCEEEE
Confidence 4699999999999999999999999999999999999999999999986533445444 66666666 55999999
Q ss_pred ecCCeEEEe
Q 000556 398 LSDGQIVYQ 406 (1426)
Q Consensus 398 L~~G~iv~~ 406 (1426)
|++|++++.
T Consensus 219 l~~g~i~~~ 227 (228)
T PRK10584 219 LVNGQLQEE 227 (228)
T ss_pred EECCEEEec
Confidence 999999753
No 346
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.1e-33 Score=314.37 Aligned_cols=194 Identities=30% Similarity=0.410 Sum_probs=162.1
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC------ccceEEEecCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHDNHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1426)
..+|+|+|++|++|++++|+||||||||||+++|+|.++|. +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 45999999999999999999999999999999999999887 999999999876542 135799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+.+||+||+.++....+... ...+..++++++.+||++..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFP-- 135 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 89999999998754321100 001124567889999987666554
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+ ++|+.++|..+++.+++|++++|
T Consensus 136 ---~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 136 ---EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RG-TTVIVATHDLSLVDRVAHRVIIL 210 (214)
T ss_pred ---hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCEEEEe
Confidence 46999999999999999999999999999999999999999999998754 34 45555778888999999999999
Q ss_pred cCCe
Q 000556 399 SDGQ 402 (1426)
Q Consensus 399 ~~G~ 402 (1426)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 347
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-33 Score=321.35 Aligned_cols=206 Identities=32% Similarity=0.489 Sum_probs=170.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 45899999999999999999999999999999999999887 9999999987754332 35689999998887889
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
||+||+.++....+... .+....++.+++.+||++..++.+
T Consensus 92 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 132 (258)
T PRK13548 92 TVEEVVAMGRAPHGLSR----------------------------------AEDDALVAAALAQVDLAHLAGRDY----- 132 (258)
T ss_pred CHHHHHHhhhcccCCCc----------------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----
Confidence 99999988542111000 001123567889999987666655
Q ss_pred ccCChhHhhHHHHHHHHh------cCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 322 RGISGGERKRVTTGEMMV------GPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~------~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
..|||||||||+||+||+ .+|++++|||||+|||+.+...+.+.|+++++..+ .+|+.++|+..++.+++|+|
T Consensus 133 ~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i 211 (258)
T PRK13548 133 PQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERG-LAVIVVLHDLNLAARYADRI 211 (258)
T ss_pred ccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhcCEE
Confidence 469999999999999999 59999999999999999999999999999863334 45555778888899999999
Q ss_pred EEecCCeEEEecChhhHH
Q 000556 396 ILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1426)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999987764
No 348
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.6e-33 Score=319.39 Aligned_cols=214 Identities=21% Similarity=0.296 Sum_probs=175.4
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc--eEEEEEEEcC
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG--YITGNITISG 904 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~--~~~G~i~i~g 904 (1426)
..+.++|+++.++ +.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 3588999988762 24899999999999999999999999999999999986531 1579999999
Q ss_pred ccCCcccc-cceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc---cccccccCCCC
Q 000556 905 YPKKQETF-ARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP---LIQSLVGLPGV 978 (1426)
Q Consensus 905 ~~~~~~~~-~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~vg~~~~ 978 (1426)
.++..... ++.++|++|++. +.+..|+.+++.+.+.... ... .++.++++++.++|.+ ..++. +
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~ 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----P 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----C
Confidence 87653322 356999999974 4466799998876433221 111 2256889999999976 33444 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~- 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH- 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998764 899999999986 57788999999985
Q ss_pred cEEEEEcCC
Q 000556 1058 GQEIYVGPL 1066 (1426)
Q Consensus 1058 g~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 217 G~i~~~~~~ 225 (254)
T PRK10418 217 GRIVEQGDV 225 (254)
T ss_pred CEEEEecCH
Confidence 789988874
No 349
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-33 Score=319.32 Aligned_cols=219 Identities=25% Similarity=0.273 Sum_probs=176.1
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 904 (1426)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478899988763 246999999999999999999999999999999999964321 1379999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 979 (1426)
.++.. ...++.++|++|++.+++. ||+||+.|....+. .......++.+.++++.+++.+....... ..+.
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 148 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHG--EKNKKTLDTIVEKSLKGAALWDEVKDRLH-DSAL 148 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcC--CCCHHHHHHHHHHHHHHhcCchhhHHHhh-cChh
Confidence 87643 2235678999999988874 99999998754432 11223334568888999888542111111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.||+|||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 149 ~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14261 149 SLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GK 225 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999875 699999999986 47788999999986 78
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14261 226 LIEFDKT 232 (253)
T ss_pred EEEcCCH
Confidence 9888875
No 350
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=318.92 Aligned_cols=203 Identities=26% Similarity=0.393 Sum_probs=166.3
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
+.+|+|+|+.|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++..++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 45899999999999999999999999999999999999987 9999999998765432 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHh-CCcccccccccCc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLEVCADTMVGDE 319 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vG~~ 319 (1426)
+||+||+.++..... . + + ....++.+++.+ ++.+..++.
T Consensus 95 ~tv~~~l~~~~~~~~---~-~---~-----------------------------~~~~~~~~l~~~~~l~~~~~~~---- 134 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R-D---Q-----------------------------FQERIKWVYELFPRLHERRIQR---- 134 (237)
T ss_pred CcHHHHHHHhhhccC---h-h---H-----------------------------HHHHHHHHHHHHHHHHHHHhCc----
Confidence 999999987542110 0 0 0 001233445556 465544443
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
++.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+.| |+.++|+.+++.+.+|++++|+
T Consensus 135 -~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~t-iii~sH~~~~~~~~~d~i~~l~ 211 (237)
T PRK11614 135 -AGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QGMT-IFLVEQNANQALKLADRGYVLE 211 (237)
T ss_pred -hhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CCCE-EEEEeCcHHHHHhhCCEEEEEe
Confidence 457999999999999999999999999999999999999999999998764 3445 5557788889999999999999
Q ss_pred CCeEEEecChhhHH
Q 000556 400 DGQIVYQGPRELVL 413 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1426)
+|++++.|+.+++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999998764
No 351
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.2e-33 Score=317.28 Aligned_cols=202 Identities=26% Similarity=0.306 Sum_probs=165.8
Q ss_pred eecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHHHHH
Q 000556 168 LKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRETL 247 (1426)
Q Consensus 168 L~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 247 (1426)
|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999987 9999999998765432 248999999999999999999
Q ss_pred HHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChh
Q 000556 248 AFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGG 327 (1426)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGG 327 (1426)
.+.......... ..+....++.+++.+||++..++.+ +.||||
T Consensus 76 ~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPDLS--------------------------------KSERRAIVEEHIALVGLTEAADKRP-----GQLSGG 118 (230)
T ss_pred HHHHHhcccCCC--------------------------------HHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHH
Confidence 875321000000 0011224567889999987777655 469999
Q ss_pred HhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEec
Q 000556 328 ERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1426)
Q Consensus 328 qrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~~G 407 (1426)
|||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ .+|+.++|+.+++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHR-VTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 99999999999999999999999999999999999999998865334 45555778888899999999999999999998
Q ss_pred ChhhH
Q 000556 408 PRELV 412 (1426)
Q Consensus 408 ~~~~~ 412 (1426)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65543
No 352
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=2.1e-33 Score=313.72 Aligned_cols=193 Identities=25% Similarity=0.342 Sum_probs=160.4
Q ss_pred cCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEeccCCCCCCCCC
Q 000556 851 EDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVT 930 (1426)
Q Consensus 851 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lT 930 (1426)
++.+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+|
T Consensus 32 ~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~t 100 (224)
T cd03220 32 VGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELT 100 (224)
T ss_pred cCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCc
Confidence 345679999999999999999999999999999999999865 358999999976421 111223456799
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCC
Q 000556 931 VYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1010 (1426)
Q Consensus 931 v~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsg 1010 (1426)
|+||+.+....+. .+....++.++++++.+++.+..++.+ ..||||||||++|||+|+.+|++|+|||||+|
T Consensus 101 v~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~g 172 (224)
T cd03220 101 GRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAV 172 (224)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999987654321 223344556888999999988877764 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 1011 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 1011 LD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 173 LD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 173 GDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 9999999999999998777899999999986 57788999999985 7887654
No 353
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-33 Score=319.96 Aligned_cols=219 Identities=22% Similarity=0.293 Sum_probs=178.5
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCC---ceEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 904 (1426)
.+.++|+++.++ .+.+|+|||++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 578999998874 24699999999999999999999999999999999997642 13589999999
Q ss_pred ccCCc----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000556 905 YPKKQ----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 980 (1426)
Q Consensus 905 ~~~~~----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 980 (1426)
.++.. ...++.++|++|++.+++ .|++||+.+..... .....++.++.+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH--KLVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87642 134567899999988887 89999998764322 112333344556788999998753322111 12468
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEE
Q 000556 981 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1060 (1426)
Q Consensus 981 LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~ 1060 (1426)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999986 57789999999986 799
Q ss_pred EEEcCC
Q 000556 1061 IYVGPL 1066 (1426)
Q Consensus 1061 v~~G~~ 1066 (1426)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 998885
No 354
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.1e-33 Score=321.98 Aligned_cols=207 Identities=24% Similarity=0.321 Sum_probs=170.4
Q ss_pred cceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCC--
Q 000556 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHD-- 235 (1426)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d-- 235 (1426)
++.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 356999999999999999999999999999999999999987 9999999988764322 34699999986
Q ss_pred CCCCCCCHHHHHHHhhhhc-CCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-cccc
Q 000556 236 NHIGEMTVRETLAFSARCQ-GVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCAD 313 (1426)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~d 313 (1426)
.+.+.+||+||+.+..... +.. ..+....++.+++.+||+ ...+
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~ 145 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLTSLD----------------------------------ESEQKARIAELLDMVGLRSEDAD 145 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhh
Confidence 4667899999998754211 000 001123456788999996 5555
Q ss_pred ccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcC
Q 000556 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1426)
Q Consensus 314 t~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD 393 (1426)
.. ++.|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++.+.. +++|+.++|+...+.+++|
T Consensus 146 ~~-----~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d 219 (265)
T TIGR02769 146 KL-----PRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAF-GTAYLFITHDLRLVQSFCQ 219 (265)
T ss_pred CC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHHHhc
Confidence 44 45799999999999999999999999999999999999999999999986533 4455557888888999999
Q ss_pred eEEEecCCeEEEecChhhHH
Q 000556 394 DIILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1426)
++++|++|++++.|+.+++.
T Consensus 220 ~i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 220 RVAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEEeCCEEEEECCHHHHc
Confidence 99999999999999998764
No 355
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-33 Score=288.13 Aligned_cols=205 Identities=26% Similarity=0.374 Sum_probs=177.1
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1426)
..+|+|+|+.|.+||.++++||||||||||||+++|..+|. .|+|.+||++++.- ...-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gP--gaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGP--GAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCC--CccceeEeccCccchhhHHH
Confidence 45899999999999999999999999999999999999998 99999999987643 33458999999999999999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 000556 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1426)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1426)
||++|+.+++|.++. +...++...+...||++..+..| -.|
T Consensus 93 dNvafgL~l~Gi~k~----------------------------------~R~~~a~q~l~~VgL~~~~~~~i-----~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA----------------------------------QRREIAHQMLALVGLEGAEHKYI-----WQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH----------------------------------HHHHHHHHHHHHhCcccccccce-----Eee
Confidence 999999999886532 12235677899999998776544 579
Q ss_pred ChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec--CCe
Q 000556 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1426)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~--~G~ 402 (1426)
||||||||.|||||..+|+.|+||||+++||.-++.++.+.|-++.+.. +..+..++|+.+|..-+++++++|+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~t-gk~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQET-GKQVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHh-CCeEEEEeccHHHHHhhhheeEEecCCCce
Confidence 9999999999999999999999999999999999999999988887654 4455558999999999999999997 489
Q ss_pred EEEecChhhHHH
Q 000556 403 IVYQGPRELVLE 414 (1426)
Q Consensus 403 iv~~G~~~~~~~ 414 (1426)
|+..=+.+-...
T Consensus 213 vv~~~~~df~rR 224 (259)
T COG4525 213 VVERLPLDFARR 224 (259)
T ss_pred eeEecCCCHHHH
Confidence 998877664433
No 356
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=318.94 Aligned_cols=219 Identities=18% Similarity=0.216 Sum_probs=177.8
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITIS 903 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~ 903 (1426)
..+..+++++.+. ++.+|+|+|+.++|||+++|+|+||||||||+++|+|...+. +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFYG-------------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEeC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 3567777776652 356999999999999999999999999999999999976431 258999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000556 904 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 978 (1426)
Q Consensus 904 g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 978 (1426)
|.++.. ..+++.++|++|++.++ .+|+.||+.+....+. . .....+.++++++.++|.+..+...+. ..
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLKV-SG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhhC-Cc
Confidence 987632 13456799999998877 5999999988754331 1 122345688999999986543322221 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe---
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK--- 1055 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~--- 1055 (1426)
+.||+|||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 6899999999999999999999999999999999999999999999985 4799999999986 5778999999996
Q ss_pred ----cCcEEEEEcCC
Q 000556 1056 ----RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ----~gg~~v~~G~~ 1066 (1426)
++|+++..|+.
T Consensus 226 ~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 226 SQGTRTGYLVEMGPT 240 (261)
T ss_pred ccccCCceEEEeCCH
Confidence 46899999875
No 357
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.6e-33 Score=316.45 Aligned_cols=207 Identities=23% Similarity=0.292 Sum_probs=166.9
Q ss_pred EeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC----CCCceeEEEEcCccCCCCCc-cceEEEecCCCC--CCC
Q 000556 167 ILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDS----SLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDN--HIG 239 (1426)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 239 (1426)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 47899999999999999999999999999999999987 6 9999999988764422 257999999974 556
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000556 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1426)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1426)
.+|+.|++.+.....+... .+....++++++.+||++.. ...+.
T Consensus 78 ~~t~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~--~~~~~ 121 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKLS----------------------------------KQARALILEALEAVGLPDPE--EVLKK 121 (230)
T ss_pred ccCHHHHHHHHHHHcCccH----------------------------------HHHHHHHHHHHHHcCCCchH--HHHhC
Confidence 7899999987543211000 00123456789999997420 11123
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
.+..|||||||||+||++++.+|++++|||||+|||..+...+.+.|+++++. .+++|+.++|..+++..++|+|++|+
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQL-FGTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 44579999999999999999999999999999999999999999999988653 34455557788889999999999999
Q ss_pred CCeEEEecChhhHH
Q 000556 400 DGQIVYQGPRELVL 413 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1426)
+|+++..|+.+++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999988764
No 358
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.5e-34 Score=364.91 Aligned_cols=211 Identities=27% Similarity=0.417 Sum_probs=178.7
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++|+||+|.|+. ++++|+|+|++++|||++||+||||||||||+++|.|..++ .+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCEe
Confidence 46999999999862 35699999999999999999999999999999999998763 58999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-------ccccccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-------PLIQSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-------~~~~~~vg~~ 976 (1426)
+++ ..+++.++||+|++.++. -||+||+.++.. +.++ +.++++++..++. +..|+.+|.
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~-----~at~----eei~~a~k~a~~~d~I~~lp~g~dt~vge- 461 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGRP-----DATD----EEIEEALKLANAHEFIANLPDGYDTIVGE- 461 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCCC-----CCCH----HHHHHHHHHhChHHHHHhCcccccceecC-
Confidence 765 456788999999999987 899999987531 1222 3355666655443 356888884
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
+..+||||||||++||||++++|+||+||||||+||+.++..|++.++++. +|+|+|+++|+++ ....+|+|++|++
T Consensus 462 ~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~ 538 (567)
T COG1132 462 RGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN 538 (567)
T ss_pred CCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC
Confidence 446899999999999999999999999999999999999999999999886 5799999999986 3455999999996
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++..|..
T Consensus 539 -G~i~e~G~h 547 (567)
T COG1132 539 -GRIVERGTH 547 (567)
T ss_pred -CEEEEecCH
Confidence 789999985
No 359
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=353.53 Aligned_cols=218 Identities=26% Similarity=0.317 Sum_probs=182.6
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
-++++|+++.++ ++.+|+||||++++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEP--TKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCC--CccEEEECCEEC
Confidence 378899988773 24699999999999999999999999999999999998753 479999999876
Q ss_pred Cccc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhc--C-CC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000556 908 KQET----FARISGYCEQNDIHSPFVTVYESLLYSAWLR--L-PP-EVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 908 ~~~~----~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr--~-~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 979 (1426)
.... .++.++|++|++.+++.+||+|++.+..... . .. ..+.++.+++++++++.+||.+..++.+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 4321 2346899999998889999999998753211 0 00 0122334466889999999988777764 5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999888999999999986 57788999999985 78
Q ss_pred EEEEcCCC
Q 000556 1060 EIYVGPLG 1067 (1426)
Q Consensus 1060 ~v~~G~~~ 1067 (1426)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (510)
T PRK09700 223 SVCSGMVS 230 (510)
T ss_pred Eeeecchh
Confidence 99998864
No 360
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=323.75 Aligned_cols=215 Identities=20% Similarity=0.277 Sum_probs=175.2
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 904 (1426)
.+.++|+++.++ ...+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 588999998873 2359999999999999999999999999999999999642 1 02579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK----PLIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 975 (1426)
.++.. ...++.++|++|++.+++. ||.||+.+....+. ..+....++.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHG--INDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1245679999999988874 99999988654321 112233345678889988874 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 468999999999999999999999999999999999999999999999865 689999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 5 789988874
No 361
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=322.11 Aligned_cols=215 Identities=20% Similarity=0.260 Sum_probs=175.0
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 904 (1426)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 488999998773 2369999999999999999999999999999999999642 1 13579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 975 (1426)
.++.. ...++.++|++|++.+++. |++||+.+..... ........++.++++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYA--GERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87642 1235679999999988874 9999998764322 11112233455788899888853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999965 689999999986 5778999999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 5 789998874
No 362
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=318.34 Aligned_cols=215 Identities=25% Similarity=0.330 Sum_probs=175.2
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 904 (1426)
.+.++|+++.+. .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 478899988773 2469999999999999999999999999999999999764 11 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 975 (1426)
.+... ...++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 124567999999988776 799999987643321 1122333456788999999853 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 468999999999999999999999999999999999999999999999854 799999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 5 788888874
No 363
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.5e-33 Score=318.39 Aligned_cols=207 Identities=24% Similarity=0.385 Sum_probs=169.0
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCC-----CccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1426)
..+|+|+|++|++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 93 (247)
T TIGR00972 14 KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNP 93 (247)
T ss_pred eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCccc
Confidence 35899999999999999999999999999999999999763 22389999999987542 113579999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc----cccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE----VCAD 313 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1426)
++ +||+||+.+.....+.... .+....++.+++.+||. +..+
T Consensus 94 ~~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 139 (247)
T TIGR00972 94 FP-MSIYDNIAYGPRLHGIKDK---------------------------------KELDEIVEESLKKAALWDEVKDRLH 139 (247)
T ss_pred CC-CCHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchhhHhh
Confidence 88 9999999886543221000 00112356778899997 4454
Q ss_pred ccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcC
Q 000556 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1426)
Q Consensus 314 t~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD 393 (1426)
+. ++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+ + .+|+.++|+..++.+++|
T Consensus 140 ~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d 211 (247)
T TIGR00972 140 DS-----ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISD 211 (247)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCC
Confidence 43 457999999999999999999999999999999999999999999998764 3 455557888888999999
Q ss_pred eEEEecCCeEEEecChhhHH
Q 000556 394 DIILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1426)
+|++|++|++++.|+.+++.
T Consensus 212 ~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 212 RTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 364
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-33 Score=318.00 Aligned_cols=206 Identities=21% Similarity=0.296 Sum_probs=164.8
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHDMGEF-----VPERTAAYISQHDNHI 238 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1426)
.+|+|+|++|++||+++|+|||||||||||++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 58999999999999999999999999999999999988621 1389999999876421 1245799999998777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc----ccccc
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE----VCADT 314 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1426)
+ +||+||+.++....+.... .+....++..++.+|+. +..++
T Consensus 101 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 L-MSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred c-CcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 4 8999999986533211000 00112345667777763 33444
Q ss_pred cccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCe
Q 000556 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1426)
Q Consensus 315 ~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~ 394 (1426)
.++.|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++. .+ ++|+.++|+..++.+++|+
T Consensus 147 -----~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 -----NALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK--ES-YTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred -----CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhCCE
Confidence 345799999999999999999999999999999999999999999999984 24 4555578888889999999
Q ss_pred EEEecCCeEEEecChhhHH
Q 000556 395 IILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1426)
|++|++|+++..|+.+++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 365
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=5.2e-34 Score=369.50 Aligned_cols=209 Identities=27% Similarity=0.386 Sum_probs=178.7
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++|+||+|+|+. +++.+|+|+|++|+|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP--ESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEE
Confidence 46999999999852 124699999999999999999999999999999999998764 48999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 976 (1426)
+++ ..+++.+|||+|++.+++ -|++||+.++. + .+ ++.++++++..++.+.. |+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 764 356788999999999886 59999997642 1 22 23478888888887654 5666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|+|++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999886 589999999985 5678999999985
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 799999984
No 366
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=329.17 Aligned_cols=217 Identities=18% Similarity=0.195 Sum_probs=171.6
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CceeEEEEcCccCCCCCc-------cceEEEecCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL-KVSGRVTYNGHDMGEFVP-------ERTAAYISQHDN 236 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1426)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 569999999999999999999999999999999999986421 238999999998765432 136999999875
Q ss_pred --CCCCCCHHHHHHHhhhhcCC-CchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccc
Q 000556 237 --HIGEMTVRETLAFSARCQGV-GSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCAD 313 (1426)
Q Consensus 237 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1426)
+.+.+||.+++.+....... +..+ .. ..+....+.++|+.+||.+..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~~-------------~~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW----------------QR-------------FGWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc----------------cc-------------HHHHHHHHHHHHHHCCCCChHH
Confidence 67889999999764321100 0000 00 0011234677899999975321
Q ss_pred ccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcC
Q 000556 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1426)
Q Consensus 314 t~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD 393 (1426)
+-+..+..|||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+. .+++|+.++|+...+.+++|
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQN-NNTTILLISHDLQMLSQWAD 227 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhCC
Confidence 113445689999999999999999999999999999999999999999999998653 34566668999999999999
Q ss_pred eEEEecCCeEEEecChhhHH
Q 000556 394 DIILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1426)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999998774
No 367
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.7e-33 Score=310.26 Aligned_cols=199 Identities=22% Similarity=0.289 Sum_probs=165.7
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|+++.++ .+.+|+|||+++++||++||+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARP--DAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 46778877663 24699999999999999999999999999999999998663 4799999998754
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 909 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 909 ~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
. ..+++.++|++|++.+++.+|+.|++.+....+. . ..++.++++++.+||.+..++. +..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHH
Confidence 3 2345678999999988899999999988654321 1 1234688999999998877765 357999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEE
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1054 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll 1054 (1426)
||++||++|+++|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++-..-+|++++
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999999877999999999986 354443566555
No 368
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-33 Score=323.85 Aligned_cols=204 Identities=27% Similarity=0.399 Sum_probs=168.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCC-CCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDN-HIG 239 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~-~~~ 239 (1426)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFV 91 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcc
Confidence 34899999999999999999999999999999999999987 9999999998764322 356999999875 466
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000556 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1426)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1426)
.+||+||+.|+....+... .+....++.+++.+||++..++.+
T Consensus 92 ~~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~--- 134 (274)
T PRK13644 92 GRTVEEDLAFGPENLCLPP----------------------------------IEIRKRVDRALAEIGLEKYRHRSP--- 134 (274)
T ss_pred cchHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCCc---
Confidence 7899999988653321100 011224567889999988777655
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++ ..+|+|++|+
T Consensus 135 --~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~~tH~~~~~-~~~d~v~~l~ 209 (274)
T PRK13644 135 --KTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-K-GKTIVYITHNLEEL-HDADRIIVMD 209 (274)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHH-hhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998764 3 44555567777777 5699999999
Q ss_pred CCeEEEecChhhHH
Q 000556 400 DGQIVYQGPRELVL 413 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1426)
+|++++.|+.+++.
T Consensus 210 ~G~i~~~g~~~~~~ 223 (274)
T PRK13644 210 RGKIVLEGEPENVL 223 (274)
T ss_pred CCEEEEECCHHHHh
Confidence 99999999988764
No 369
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.2e-33 Score=318.07 Aligned_cols=211 Identities=22% Similarity=0.330 Sum_probs=171.4
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 46999999999999999999999999999999999999987 9999999988754432 2469999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
+||+||+.++..... ..+...... ...+....++++++.+|+++..++.+
T Consensus 92 ~tv~~nl~~~~~~~~--~~~~~~~~~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (242)
T TIGR03411 92 LTVFENLELALPRDK--SVFASLFFR------------------------LSAEEKDRIEEVLETIGLADEADRLA---- 141 (242)
T ss_pred CCHHHHHHHhhhccc--ccccccccc------------------------cHHHHHHHHHHHHHHcCCchhhcCCh----
Confidence 999999988643110 000000000 00011234677899999987766554
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
+.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.+ +. +|+.++|+.+++.++||+|++|++
T Consensus 142 -~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~~-tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 142 -GLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--KH-SVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--CC-EEEEEECCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998753 34 555577888899999999999999
Q ss_pred CeEEEecChhhH
Q 000556 401 GQIVYQGPRELV 412 (1426)
Q Consensus 401 G~iv~~G~~~~~ 412 (1426)
|+++++|+.+++
T Consensus 218 g~~~~~~~~~~~ 229 (242)
T TIGR03411 218 GSVLAEGSLDQV 229 (242)
T ss_pred CeEEeeCCHHHH
Confidence 999999998765
No 370
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-33 Score=323.36 Aligned_cols=205 Identities=25% Similarity=0.353 Sum_probs=170.8
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCC-CCCCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGEM 241 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1426)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4899999999999999999999999999999999999988 9999999988754322 356899999863 34468
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
||+||+.++....+... .+....++.+++.+||.+..++.+
T Consensus 95 tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 135 (277)
T PRK13652 95 TVEQDIAFGPINLGLDE----------------------------------ETVAHRVSSALHMLGLEELRDRVP----- 135 (277)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 99999987653221100 011224577899999988777655
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.+.+|+|++|++|
T Consensus 136 ~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 136 HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETY-GMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999986532 455565788888999999999999999
Q ss_pred eEEEecChhhHH
Q 000556 402 QIVYQGPRELVL 413 (1426)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1426)
++++.|+.+++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998874
No 371
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.5e-33 Score=319.42 Aligned_cols=206 Identities=21% Similarity=0.318 Sum_probs=171.1
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC----------------ccceE
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV----------------PERTA 228 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----------------~~~~~ 228 (1426)
..+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 45999999999999999999999999999999999999987 999999998775321 14579
Q ss_pred EEecCCCCCCCCCCHHHHHHHhhhh-cCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhC
Q 000556 229 AYISQHDNHIGEMTVRETLAFSARC-QGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG 307 (1426)
Q Consensus 229 ~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg 307 (1426)
+|++|++.+++.+||+||+.++... .+... .+....++++++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMAR----------------------------------AEAEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcC
Confidence 9999999899999999999875321 11000 001123567789999
Q ss_pred CcccccccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchh
Q 000556 308 LEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPE 387 (1426)
Q Consensus 308 L~~~~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~ 387 (1426)
+++..+.. ++.||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.+. .+++++.++|+.++
T Consensus 136 l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~ 209 (252)
T TIGR03005 136 LADKADHM-----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGF 209 (252)
T ss_pred ChhHhhcC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHH
Confidence 98766644 4579999999999999999999999999999999999999999999988653 34555557888888
Q ss_pred HHhhcCeEEEecCCeEEEecChhhHH
Q 000556 388 TYDLFDDIILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 388 ~~~~fD~vilL~~G~iv~~G~~~~~~ 413 (1426)
+.+++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999988764
No 372
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-33 Score=317.30 Aligned_cols=210 Identities=22% Similarity=0.318 Sum_probs=164.7
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCC--C---ccceEEEecCCCCCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF--V---PERTAAYISQHDNHI 238 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~~~ 238 (1426)
.+|+|+|+.|++|++++|+|||||||||||++|+|..+ +....+|+|.++|+++... . .++.++|++|++..+
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 58999999999999999999999999999999999864 1001289999999887532 1 135799999998777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+ .||+||+.++....+.... .+....++..++.+||.+...+.. +
T Consensus 100 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVKDK---------------------------------AYLAERVERSLRHAALWDEVKDRL-H 144 (253)
T ss_pred c-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 7 5999999987543221000 001123456678888854222222 2
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
+.++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.+++|+|++|
T Consensus 145 ~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~tH~~~~~~~~~d~v~~l 221 (253)
T PRK14242 145 ESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK--AR-YTIIIVTHNMQQAARVSDVTAFF 221 (253)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CeEEEEEecHHHHHHhCCEEEEE
Confidence 3456799999999999999999999999999999999999999999999874 24 45555778888899999999999
Q ss_pred cCCeEEEecChhhHH
Q 000556 399 SDGQIVYQGPRELVL 413 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1426)
++|++++.|+.+++.
T Consensus 222 ~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 222 YMGKLIEVGPTEQIF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 373
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-33 Score=320.20 Aligned_cols=221 Identities=21% Similarity=0.276 Sum_probs=172.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1426)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 46999999999999999999999999999999999999987 9999999998765332 2348899999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
+||+||+.++....... +...... . .+..+ ....+....++.+++.+||++..++.+
T Consensus 95 ~tv~enl~~~~~~~~~~---~~~~~~~------~-~~~~~---------~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 151 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT---GLFSGLL------K-TPAFR---------RAESEALDRAATWLERVGLLEHANRQA---- 151 (255)
T ss_pred CcHHHHHHHhhhccccc---hhhhhhc------c-ccccc---------cchhHHHHHHHHHHHhCChhhhhhCCh----
Confidence 99999999864311000 0000000 0 00000 000012234567889999987666554
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
+.|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.+. .+++|+.++|+..++.+++|++++|++
T Consensus 152 -~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 152 -GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNE-HNVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999987653 245555578888899999999999999
Q ss_pred CeEEEecChhhHH
Q 000556 401 GQIVYQGPRELVL 413 (1426)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1426)
|++++.|+.+++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999988763
No 374
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=7.9e-34 Score=367.82 Aligned_cols=205 Identities=28% Similarity=0.388 Sum_probs=165.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
.++|+|+|++|+|||.++|+||||||||||+|+|+|.++|+ +|+|.+||+++.+..+ ++.++||+|++.+|+ .
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-G 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-c
Confidence 45899999999999999999999999999999999999998 9999999999987765 468999999987765 6
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
|++|||.++.. . + .+.+.+.++. .+ .++.+ -.+++..||.+|+.+
T Consensus 542 TI~eNi~~~~~-~---~-~e~i~~al~~---a~------------------------l~~~i--~~lp~G~dt~ige~G- 586 (686)
T TIGR03797 542 SIFENIAGGAP-L---T-LDEAWEAARM---AG------------------------LAEDI--RAMPMGMHTVISEGG- 586 (686)
T ss_pred cHHHHHhcCCC-C---C-HHHHHHHHHH---cC------------------------cHHHH--HhccccccccccCCC-
Confidence 99999998632 1 1 1111111110 00 01111 235677899999865
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
.+||||||||++||||++++|++++||||||+||+.+..+|.+.|+++ ++|+|+ ++|.. ++.+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~Ii-ItHr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIV-IAHRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEE-EecCh-HHHHcCCEEEEEECC
Confidence 579999999999999999999999999999999999999999999874 356555 55544 556779999999999
Q ss_pred eEEEecChhhHHH
Q 000556 402 QIVYQGPRELVLE 414 (1426)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1426)
+++++|+++++++
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998864
No 375
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-33 Score=323.33 Aligned_cols=205 Identities=25% Similarity=0.344 Sum_probs=169.0
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC----ccceEEEecCCCC-CCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV----PERTAAYISQHDN-HIG 239 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 239 (1426)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999987 999999999875422 2467999999864 344
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000556 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1426)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1426)
..||.||+.|+....+... .+....++++++.+||++..++.+
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 142 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAP--- 142 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc---
Confidence 5799999998754322100 011234677899999988777665
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+..+.| |+.++|+..++.. +|++++|+
T Consensus 143 --~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~t-illvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 143 --HLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGIT-IILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecChHHHhc-CCEEEEEE
Confidence 4699999999999999999999999999999999999999999999986533444 5556777777765 99999999
Q ss_pred CCeEEEecChhhHH
Q 000556 400 DGQIVYQGPRELVL 413 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1426)
+|+++++|+.+++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998875
No 376
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=9.5e-34 Score=326.36 Aligned_cols=237 Identities=27% Similarity=0.424 Sum_probs=189.1
Q ss_pred HhhcCCCCCccEEEEeceEEEEEEecCCCCCCChhHHHHHHHHHHHhhhccCCCCcccceEeecceEEEeCCeEEEEEcC
Q 000556 107 IDRVGIDLPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGP 186 (1426)
Q Consensus 107 ~~~~~~~~p~v~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp 186 (1426)
-+++.++-|+-.+..|++++-.+ ..++++|+|+||.+.+|+-++|+||
T Consensus 323 ~~~m~LP~P~g~L~Ve~l~~~PP--------------------------------g~~~pil~~isF~l~~G~~lgIIGP 370 (580)
T COG4618 323 AERMPLPAPQGALSVERLTAAPP--------------------------------GQKKPILKGISFALQAGEALGIIGP 370 (580)
T ss_pred cCCCCCCCCCceeeEeeeeecCC--------------------------------CCCCcceecceeEecCCceEEEECC
Confidence 33566666777788888886221 1236799999999999999999999
Q ss_pred CCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCcc---ceEEEecCCCCCCCCCCHHHHHHHhhhhcCCCchhhHh
Q 000556 187 PASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE---RTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELL 263 (1426)
Q Consensus 187 ~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~ 263 (1426)
||||||||.++|.|..+|. +|.|.+||.+++.+.+. +.+||.||+-.+|+ -||.|||.- +.
T Consensus 371 SgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIaR---f~--------- 434 (580)
T COG4618 371 SGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIAR---FG--------- 434 (580)
T ss_pred CCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHHh---cc---------
Confidence 9999999999999999987 99999999999887764 78999999876776 599999952 21
Q ss_pred HHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhHhhHHHHHHHHhcCCc
Q 000556 264 TELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPAL 343 (1426)
Q Consensus 264 ~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~ 343 (1426)
++.|.+...+++...+ +.+ -++.|++.+||.||+.+. +||||||||+++|||++++|.
T Consensus 435 -------------~~~d~~kIieAA~lAg------vHe--lIl~lP~GYdT~iG~~G~-~LSgGQRQRIaLARAlYG~P~ 492 (580)
T COG4618 435 -------------EEADPEKVIEAARLAG------VHE--LILRLPQGYDTRIGEGGA-TLSGGQRQRIALARALYGDPF 492 (580)
T ss_pred -------------ccCCHHHHHHHHHHcC------hHH--HHHhCcCCccCccCCCCC-CCCchHHHHHHHHHHHcCCCc
Confidence 1122222222221111 111 256899999999998765 799999999999999999999
Q ss_pred EeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecChhhHHHHH
Q 000556 344 ALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFF 416 (1426)
Q Consensus 344 vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~F 416 (1426)
+++||||-|+||+.....+.+.|.+.. ..++|+|+ ++| .+.+...+|+|++|++|++-.+|+++|++...
T Consensus 493 lvVLDEPNsNLD~~GE~AL~~Ai~~~k-~rG~~vvv-iaH-RPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 493 LVVLDEPNSNLDSEGEAALAAAILAAK-ARGGTVVV-IAH-RPSALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred EEEecCCCCCcchhHHHHHHHHHHHHH-HcCCEEEE-Eec-CHHHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 999999999999999999999998864 35566655 444 45788999999999999999999999998743
No 377
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.5e-33 Score=309.87 Aligned_cols=195 Identities=26% Similarity=0.320 Sum_probs=166.3
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
+++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 4677776653 24699999999999999999999999999999999998763 47999999987542
Q ss_pred --ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000556 910 --ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1426)
Q Consensus 910 --~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 987 (1426)
..+++.++|++|++.+++.+|++|++.+.... . .+++++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHH
Confidence 23456789999999888899999999874311 1 2345788999999988777653 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEE
Q 000556 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1054 (1426)
Q Consensus 988 Rl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll 1054 (1426)
|++||++|+.+|++|+|||||+|||+.+...+++.|+++.++|+|+|+++|++. ++...+|+++++
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999999999999999999999999998877999999999986 577889999877
No 378
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-33 Score=321.51 Aligned_cols=204 Identities=22% Similarity=0.305 Sum_probs=167.8
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCC-CCCCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGEM 241 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1426)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999987 9999999998754322 357899999974 67888
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
|+++|+.|.....+... .+....++.+++.+||.+..++.+
T Consensus 100 ~v~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVPY----------------------------------DEMHRRVSEALKQVDMLERADYEP----- 140 (269)
T ss_pred cHHHHHHhhHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCc-----
Confidence 99999988653221100 001123567789999987766544
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
+.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+..+.| |+.++|+..++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~t-iiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNIT-IISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCchHHhc-CCEEEEEECC
Confidence 5799999999999999999999999999999999999999999999876433445 4446666677765 9999999999
Q ss_pred eEEEecChhhHH
Q 000556 402 QIVYQGPRELVL 413 (1426)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1426)
++++.|+.+++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 379
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-33 Score=316.45 Aligned_cols=204 Identities=24% Similarity=0.310 Sum_probs=167.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCC------C---CccceEEEecCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGE------F---VPERTAAYISQHD 235 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~------~---~~~~~~~yv~Q~d 235 (1426)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+|+ +|+|.++|.++.. . ..++.++|++|++
T Consensus 15 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~ 91 (242)
T PRK11124 15 HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQY 91 (242)
T ss_pred eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCc
Confidence 35999999999999999999999999999999999999887 9999999987631 1 1135689999999
Q ss_pred CCCCCCCHHHHHHHhh-hhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccc
Q 000556 236 NHIGEMTVRETLAFSA-RCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1426)
Q Consensus 236 ~~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1426)
.+++.+||+||+.+.. ...+... .+....++.+++.+||++..++
T Consensus 92 ~~~~~~tv~e~i~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~ 137 (242)
T PRK11124 92 NLWPHLTVQQNLIEAPCRVLGLSK----------------------------------DQALARAEKLLERLRLKPYADR 137 (242)
T ss_pred cccCCCcHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhC
Confidence 9999999999997532 1111100 0011245678899999876665
Q ss_pred cccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCe
Q 000556 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1426)
Q Consensus 315 ~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~ 394 (1426)
.+ +.||||||||++||++++.+|++++|||||+|||+.+...+.+.|+++.. .+ ++++.++|+..++.+++|+
T Consensus 138 ~~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sh~~~~~~~~~d~ 210 (242)
T PRK11124 138 FP-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-TG-ITQVIVTHEVEVARKTASR 210 (242)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCE
Confidence 54 47999999999999999999999999999999999999999999998753 34 4555577888888899999
Q ss_pred EEEecCCeEEEecChhhH
Q 000556 395 IILLSDGQIVYQGPRELV 412 (1426)
Q Consensus 395 vilL~~G~iv~~G~~~~~ 412 (1426)
+++|++|++++.|+.+++
T Consensus 211 i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 211 VVYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEEECCEEEEeCCHHHh
Confidence 999999999999988754
No 380
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-33 Score=316.64 Aligned_cols=215 Identities=25% Similarity=0.324 Sum_probs=174.0
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 904 (1426)
.+.++|+++.++ .+.+|+|+|+++++||++||+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 478899988763 2469999999999999999999999999999999999643 21 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 975 (1426)
.++.. ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.+.+.++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87632 134567999999988887 6999999886543321 112223345677888887742 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
+..||+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 468999999999999999999999999999999999999999999999865 589999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
+ |+++..|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14255 222 T-GNLIEFADT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 788888874
No 381
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.4e-33 Score=313.39 Aligned_cols=196 Identities=24% Similarity=0.339 Sum_probs=163.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc------cceEEEecCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1426)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 45999999999999999999999999999999999999987 9999999988754321 35789999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+.+||+||+.+.....+... .+....++.+++.+||.+..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNFP-- 135 (222)
T ss_pred ccccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc--
Confidence 89999999988654322100 001123456788999987666544
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
..||||||||++||+|++.+|++++|||||+|||+.+...+.+.|+++.+ . +++++.++|+.+++...+|+|++|
T Consensus 136 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l 210 (222)
T PRK10908 136 ---IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLTL 210 (222)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 47999999999999999999999999999999999999999999998754 3 455666788888999999999999
Q ss_pred cCCeEE
Q 000556 399 SDGQIV 404 (1426)
Q Consensus 399 ~~G~iv 404 (1426)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999975
No 382
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.7e-33 Score=357.16 Aligned_cols=208 Identities=28% Similarity=0.436 Sum_probs=169.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
+++|+|+|+.++|||.+||+||+|||||||+++|.|.++|+ +|+|.+||.++++... ++.++||+|++.+|. .
T Consensus 342 ~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~-~ 417 (567)
T COG1132 342 KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS-G 417 (567)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-c
Confidence 56899999999999999999999999999999999999997 9999999999887765 578999999887776 7
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
||+|||.++..-- + .+.+.+.++.. ..++.+. .++++.||.||+.+.
T Consensus 418 TI~~NI~~g~~~a---t-~eei~~a~k~a---------------------------~~~d~I~--~lp~g~dt~vge~G~ 464 (567)
T COG1132 418 TIRENIALGRPDA---T-DEEIEEALKLA---------------------------NAHEFIA--NLPDGYDTIVGERGV 464 (567)
T ss_pred cHHHHHhcCCCCC---C-HHHHHHHHHHh---------------------------ChHHHHH--hCcccccceecCCCc
Confidence 9999999974310 0 01111111110 0122222 357788999996655
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
.||||||||++||||++.+|++|+||||||+||+.+...|.+.++++. +++|+++ +.|..+.+ ..+|+|++|++|
T Consensus 465 -~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRlsti-~~aD~IiVl~~G 539 (567)
T COG1132 465 -NLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRLSTI-KNADRIIVLDNG 539 (567)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccHhHH-HhCCEEEEEECC
Confidence 699999999999999999999999999999999999999999999765 3467777 66655444 449999999999
Q ss_pred eEEEecChhhHHH
Q 000556 402 QIVYQGPRELVLE 414 (1426)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1426)
++++.|+++++..
T Consensus 540 ~i~e~G~h~eLl~ 552 (567)
T COG1132 540 RIVERGTHEELLA 552 (567)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 383
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-33 Score=320.70 Aligned_cols=204 Identities=27% Similarity=0.384 Sum_probs=169.0
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC--C---ccceEEEecCCCC-CCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF--V---PERTAAYISQHDN-HIG 239 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~-~~~ 239 (1426)
.+|+|+|++|++||+++|+||||||||||+++|+|.++++ +|+|.++|.++... . .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 5899999999999999999999999999999999999987 99999999887421 1 1357999999863 344
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000556 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1426)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1426)
.+||+||+.++....+. .+ .+....+..+++.+||++..++.++
T Consensus 93 ~~tv~e~i~~~~~~~~~-~~---------------------------------~~~~~~~~~~l~~~~L~~~~~~~~~-- 136 (275)
T PRK13639 93 APTVEEDVAFGPLNLGL-SK---------------------------------EEVEKRVKEALKAVGMEGFENKPPH-- 136 (275)
T ss_pred cccHHHHHHHHHHHcCC-CH---------------------------------HHHHHHHHHHHHHCCCchhhcCChh--
Confidence 57999999876422111 00 0111235678899999887776554
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
.||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.+ . +++|+.++|+..++.+++|+|++|+
T Consensus 137 ---~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 137 ---HLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 6999999999999999999999999999999999999999999999864 3 4555667888889999999999999
Q ss_pred CCeEEEecChhhHH
Q 000556 400 DGQIVYQGPRELVL 413 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1426)
+|++++.|+.+++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999998874
No 384
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=321.85 Aligned_cols=218 Identities=22% Similarity=0.379 Sum_probs=175.2
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ +++.+|+|+|++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRL--ASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEh
Confidence 488999988773 124699999999999999999999999999999999998663 589999999876
Q ss_pred CcccccceEEEeccCCCCC--CCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 908 KQETFARISGYCEQNDIHS--PFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~--~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
.....++.++|++|++.+. ...+++|++.+....... ........++.++++++.++|.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234689999997653 234788888653211000 01111223445788999999998877764 479999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 577899999777 4 7899988
Q ss_pred CCC
Q 000556 1065 PLG 1067 (1426)
Q Consensus 1065 ~~~ 1067 (1426)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 764
No 385
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-33 Score=322.17 Aligned_cols=205 Identities=22% Similarity=0.320 Sum_probs=166.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-------ccceEEEecCCCC-
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDN- 236 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 236 (1426)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35899999999999999999999999999999999999987 999999998875421 1356899999862
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc-ccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV-CADTM 315 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1426)
.+...||+||+.+.....+... .+....++.+++.+||.. ..+..
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 142 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVSQ----------------------------------EEAEALAREKLALVGISESLFEKN 142 (280)
T ss_pred hhccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 3334799999988643221100 001123567788899973 44443
Q ss_pred ccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 316 vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+++|++
T Consensus 143 -----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 143 -----PFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEE
Confidence 457999999999999999999999999999999999999999999998864 3 445555778888888999999
Q ss_pred EEecCCeEEEecChhhHH
Q 000556 396 ILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1426)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 386
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.1e-33 Score=349.51 Aligned_cols=220 Identities=23% Similarity=0.340 Sum_probs=181.3
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|+++.++ ++.+|+|||+++++||++||+||||||||||+++|+|...+++.+|+|.++|.+..
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 56788887763 24699999999999999999999999999999999998653224899999998764
Q ss_pred ccc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCC
Q 000556 909 QET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-EVDSETRKMFIEEVMELVELKPLI-QSLVGLPGVSGLS 982 (1426)
Q Consensus 909 ~~~----~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LS 982 (1426)
... .++.+||++|++.+++.+||.|++.+....+... ....+..+++++++++.+++.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 321 2356899999998889999999998764332111 122333456688999999998654 343 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
|||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999986 57788999999986 78888
Q ss_pred EcCCCc
Q 000556 1063 VGPLGR 1068 (1426)
Q Consensus 1063 ~G~~~~ 1068 (1426)
.|+...
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 887653
No 387
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=318.80 Aligned_cols=206 Identities=19% Similarity=0.302 Sum_probs=165.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCCC-----ccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHDMGEFV-----PERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1426)
+.+|+|+|++|++||+++|+|||||||||||++|+|.+++.. ..+|+|.++|.++.... .++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 358999999999999999999999999999999999987410 13899999998865321 23569999999877
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc----cccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE----VCAD 313 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1426)
++ +||+||+.|+.+..+... .+....++.+++.+|+. +..+
T Consensus 105 ~~-~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 149 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGANK----------------------------------KDLDGVVENALRSAALWDETSDRLK 149 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcchhhhhc
Confidence 77 899999998654322100 00112356678888884 2334
Q ss_pred ccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcC
Q 000556 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1426)
Q Consensus 314 t~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD 393 (1426)
+ .++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|
T Consensus 150 ~-----~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~-~tiiivsH~~~~~~~~~d 221 (258)
T PRK14268 150 S-----PALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--D-YTIVIVTHNMQQAARISD 221 (258)
T ss_pred C-----ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHHhCC
Confidence 3 3457999999999999999999999999999999999999999999998742 4 455557888888999999
Q ss_pred eEEEecCCeEEEecChhhHH
Q 000556 394 DIILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1426)
+|++|++|++++.|+.+++.
T Consensus 222 ~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 222 YTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 388
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.7e-33 Score=312.12 Aligned_cols=197 Identities=23% Similarity=0.322 Sum_probs=166.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCCHH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1426)
..+|+|+|+.+++||+++|+|||||||||||++|+|.++|. +|+|.++|+++.... .+.++|++|++..++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 46999999999999999999999999999999999999987 999999998765322 35799999999889999999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccC
Q 000556 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1426)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1426)
||+.+.....+. .+..+..+++.+||++..|..+ ..|
T Consensus 89 ~~~~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~L 125 (223)
T TIGR03740 89 ENLKVHTTLLGL--------------------------------------PDSRIDEVLNIVDLTNTGKKKA-----KQF 125 (223)
T ss_pred HHHHHHHHHcCC--------------------------------------CHHHHHHHHHHcCCcHHHhhhH-----hhC
Confidence 999876432210 0112456788999987766544 469
Q ss_pred ChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000556 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1426)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv 404 (1426)
|||||||++||+|++.+|++++|||||+|||+.+...+.+.|+++.. .+.+ |+.++|+..++.+.+|+|++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~t-iii~sH~~~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGIT-VILSSHILSEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCCE-EEEEcCCHHHHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998754 3444 555677778889999999999999999
Q ss_pred EecChh
Q 000556 405 YQGPRE 410 (1426)
Q Consensus 405 ~~G~~~ 410 (1426)
+.|+..
T Consensus 204 ~~~~~~ 209 (223)
T TIGR03740 204 YQGKIN 209 (223)
T ss_pred EecChh
Confidence 999865
No 389
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-33 Score=325.87 Aligned_cols=211 Identities=20% Similarity=0.284 Sum_probs=168.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCC-----CccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1426)
..+|+|+|++|++||+++|+|||||||||||++|+|..++. ...+|+|.++|.++... ..++.++||+|++..
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35899999999999999999999999999999999998631 01389999999988532 224679999999877
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
+ ..||+||+.|+....+... .+ ..+..++.+++.++|.+..++.++
T Consensus 175 ~-~~ti~eNi~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 F-EMSIFDNVAYGPRNNGIND-RK--------------------------------ILEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred C-CCcHHHHHHhHHHhcCCCh-HH--------------------------------HHHHHHHHHHHHcCCcchhhhhhh
Confidence 6 5899999998643321100 00 011224456777777654455665
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
. ....|||||||||+||||++.+|+|++|||||+|||+.+...+.++|+++.+ + .+++.++|....+.+.+|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEE
Confidence 4 4558999999999999999999999999999999999999999999998753 3 4566678888888999999999
Q ss_pred ecCCeEEEecChhhHH
Q 000556 398 LSDGQIVYQGPRELVL 413 (1426)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1426)
|++|++++.|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999874
No 390
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-33 Score=310.58 Aligned_cols=195 Identities=25% Similarity=0.369 Sum_probs=163.0
Q ss_pred cceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHHHHHH
Q 000556 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1426)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1426)
|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999987 9999999988765432 357999999998899999999998
Q ss_pred HhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhH
Q 000556 249 FSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGE 328 (1426)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGq 328 (1426)
++...... .. .+.+..++++++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~~-~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGLK-LT---------------------------------AEDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred cccccccC-cc---------------------------------HHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 75421100 00 001224567899999987777654 4799999
Q ss_pred hhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEec
Q 000556 329 RKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1426)
Q Consensus 329 rqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~~G 407 (1426)
|||++||++++.+|++++|||||+|||..++..+.+.|+++++.. +.+|+.++|+..++.+++|+|++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAET-KMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999999999999886533 445555788888999999999999999998764
No 391
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=7.7e-34 Score=320.72 Aligned_cols=211 Identities=27% Similarity=0.418 Sum_probs=162.7
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|+++.++. +++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (237)
T cd03252 1 ITFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVP--ENGRVLVDGHDLA 67 (237)
T ss_pred CEEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCeehH
Confidence 356788776631 124599999999999999999999999999999999998653 4799999998754
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc-c-----CCCCC
Q 000556 909 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLV-G-----LPGVS 979 (1426)
Q Consensus 909 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~v-g-----~~~~~ 979 (1426)
. ..+++.++|++|++.+++ .||.||+.+... ..... .+.+.++..++.+..+.+. | ...+.
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~----~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 137 (237)
T cd03252 68 LADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSME----RVIEAAKLAGAHDFISELPEGYDTIVGEQGA 137 (237)
T ss_pred hcCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHH----HHHHHHHHcCcHHHHHhCcccccchhhcCCC
Confidence 2 234567999999987765 699999976421 11111 1223333333333222110 0 11246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.|||||||||+|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ |+|||+++|++. ++ +.+|++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA-GRTVIIIAHRLS-TV-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH-HH-HhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999964 899999999986 35 56999999985 78
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 9998874
No 392
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.3e-33 Score=311.20 Aligned_cols=194 Identities=30% Similarity=0.444 Sum_probs=160.1
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCC-CCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1426)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999999987 9999999988754322 357899999874 4678
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
+||+||+.++....+... .+....++.+++.+||++..++.+
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 999999987643221100 001123567788999987666544
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++. . +++|+.++|+.+++..++|+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA-E-GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998865 3 45566678888899999999999999
Q ss_pred Ce
Q 000556 401 GQ 402 (1426)
Q Consensus 401 G~ 402 (1426)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 393
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-33 Score=312.47 Aligned_cols=206 Identities=28% Similarity=0.347 Sum_probs=172.4
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1426)
+++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.+... ++.++|++|++..++.+|+
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 46999999999999999999999999999999999999987 9999999998765332 4579999999988889999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.++....+... ......++.+++.+||++..++.+ ..
T Consensus 90 ~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (232)
T cd03300 90 FENIAFGLRLKKLPK----------------------------------AEIKERVAEALDLVQLEGYANRKP-----SQ 130 (232)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999988654322100 001123567889999987776554 47
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++...+.|+++ ++|...++.+.+|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii-~sh~~~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVF-VTHDQEEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999886533445544 67777888999999999999999
Q ss_pred EEecChhhHH
Q 000556 404 VYQGPRELVL 413 (1426)
Q Consensus 404 v~~G~~~~~~ 413 (1426)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999887653
No 394
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-33 Score=320.35 Aligned_cols=205 Identities=25% Similarity=0.335 Sum_probs=168.3
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCC--CC---ccceEEEecCCCC-CC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGE--FV---PERTAAYISQHDN-HI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~~---~~~~~~yv~Q~d~-~~ 238 (1426)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .. .++.++|++|++. .+
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 35899999999999999999999999999999999999988 9999999998742 11 1356999999864 34
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
...|+.||+.+.....+... .+....++.+++.+||++..++.+
T Consensus 91 ~~~~~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVPE----------------------------------AEITRRVDEALTLVDAQHFRHQPI-- 134 (271)
T ss_pred ccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhcCCc--
Confidence 55689999987643221100 001123567888999987776554
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ ++|+.++|+..++.+++|++++|
T Consensus 135 ---~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tii~vtH~~~~~~~~~d~i~~l 209 (271)
T PRK13638 135 ---QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QG-NHVIISSHDIDLIYEISDAVYVL 209 (271)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999764 34 45555788888899999999999
Q ss_pred cCCeEEEecChhhHH
Q 000556 399 SDGQIVYQGPRELVL 413 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1426)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 395
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.1e-33 Score=349.45 Aligned_cols=211 Identities=21% Similarity=0.315 Sum_probs=181.0
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ ++.+|+|+||++++||++||+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPP--DSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 488999998873 24699999999999999999999999999999999998653 489999999876
Q ss_pred Cccc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 908 KQET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 908 ~~~~----~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
.... .++.+||++|++.+++.+||+|++.+... . ....++.++++++.++|.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 4321 12458999999999999999999987531 1 1233456889999999988777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~ 1063 (1426)
||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.||++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999986 57788999999986 789999
Q ss_pred cCCC
Q 000556 1064 GPLG 1067 (1426)
Q Consensus 1064 G~~~ 1067 (1426)
|+..
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 8864
No 396
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-33 Score=319.69 Aligned_cols=215 Identities=21% Similarity=0.227 Sum_probs=173.9
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 904 (1426)
.+.++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 489999998774 2358999999999999999999999999999999999754 1 13589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK----PLIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 975 (1426)
.+... ...++.++|++|++.+++ .|++||+.+....+. ..+.+..++.+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87632 124567999999988877 499999988653321 112222344567778777553 223332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
+..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 468999999999999999999999999999999999999999999999865 799999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000556 1056 RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 ~gg~~v~~G~~ 1066 (1426)
+ |+++..|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 5 789988874
No 397
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-33 Score=318.97 Aligned_cols=213 Identities=22% Similarity=0.279 Sum_probs=174.3
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCC---ceEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 904 (1426)
.+.++|+++.+. ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 588999998773 24699999999999999999999999999999999997542 13579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 975 (1426)
.++.. ...++.++|++|++.+++. ||.||+.+....+. ... ..++.++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2345679999999888775 99999987654331 122 23456889999999853 33333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEE-EE
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELF-LM 1054 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~-ll 1054 (1426)
+..||||||||++||++|+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 468999999999999999999999999999999999999999999999976 489999999986 5778899975 56
Q ss_pred ecCcEEEEEcCC
Q 000556 1055 KRGGQEIYVGPL 1066 (1426)
Q Consensus 1055 ~~gg~~v~~G~~ 1066 (1426)
++ |+++..|+.
T Consensus 254 ~~-G~i~~~g~~ 264 (285)
T PRK14254 254 TG-GELVEFDDT 264 (285)
T ss_pred eC-CEEEEeCCH
Confidence 64 789888874
No 398
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-33 Score=313.07 Aligned_cols=204 Identities=27% Similarity=0.414 Sum_probs=171.2
Q ss_pred EeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHHH
Q 000556 167 ILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTVRE 245 (1426)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 245 (1426)
+|+|+|++|+|||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999988 9999999998765332 457999999998999999999
Q ss_pred HHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCC
Q 000556 246 TLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGIS 325 (1426)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LS 325 (1426)
|+.++....+... .+....+..+++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK----------------------------------KEIERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9988643221100 001123456788999987777655 4699
Q ss_pred hhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEE
Q 000556 326 GGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1426)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~ 405 (1426)
||||||++||+|++.+|++++|||||+|||+.++..+.+.|++++...+.| ++.++|..+++.+.+|+|++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~t-ili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVT-VLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999986533444 5556777788999999999999999999
Q ss_pred ecChhhHH
Q 000556 406 QGPRELVL 413 (1426)
Q Consensus 406 ~G~~~~~~ 413 (1426)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987764
No 399
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4e-33 Score=318.57 Aligned_cols=205 Identities=23% Similarity=0.323 Sum_probs=169.3
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC----------------CccceE
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF----------------VPERTA 228 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----------------~~~~~~ 228 (1426)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 45999999999999999999999999999999999999887 99999999876421 113579
Q ss_pred EEecCCCCCCCCCCHHHHHHHhhh-hcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhC
Q 000556 229 AYISQHDNHIGEMTVRETLAFSAR-CQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG 307 (1426)
Q Consensus 229 ~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg 307 (1426)
+|++|++.+++.+||+||+.++.. ..+.. ..+....+.++++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS----------------------------------KQEARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC----------------------------------HHHHHHHHHHHHHHcC
Confidence 999999999999999999987532 11100 0011234567889999
Q ss_pred Ccccc-cccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCch
Q 000556 308 LEVCA-DTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAP 386 (1426)
Q Consensus 308 L~~~~-dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~ 386 (1426)
|.+.. +. .++.||||||||++||+||+.+|++++|||||+|||+.+...+.+.|++++. . +.+|+.++|+..
T Consensus 141 l~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsH~~~ 213 (257)
T PRK10619 141 IDERAQGK-----YPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GKTMVVVTHEMG 213 (257)
T ss_pred CChhhhhC-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHH
Confidence 97643 43 3457999999999999999999999999999999999999999999998864 3 455555788888
Q ss_pred hHHhhcCeEEEecCCeEEEecChhhHH
Q 000556 387 ETYDLFDDIILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 387 ~~~~~fD~vilL~~G~iv~~G~~~~~~ 413 (1426)
++.+++|+|++|++|++++.|+.+++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 888999999999999999999988764
No 400
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=6e-33 Score=318.49 Aligned_cols=224 Identities=25% Similarity=0.337 Sum_probs=179.1
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.+.... ..+. ..++.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~~-~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSGK-HQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---cccc-cCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 67888888774100 0000 013569999999999999999999999999999999999765 35899999998754
Q ss_pred cc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000556 909 QE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 979 (1426)
Q Consensus 909 ~~------~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 979 (1426)
.. ..++.++|++|++ .+.+..|+.|++.+...... ..........++++++.+++. +..+.. ..
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLL--SLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhc--cCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 31 2356799999997 35677899999876432111 123344455789999999996 455554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
.||+|||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|++. ++.+.+|++++|++ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999986 57788999999985 7
Q ss_pred EEEEEcCCC
Q 000556 1059 QEIYVGPLG 1067 (1426)
Q Consensus 1059 ~~v~~G~~~ 1067 (1426)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 999998764
No 401
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-33 Score=316.64 Aligned_cols=213 Identities=23% Similarity=0.300 Sum_probs=169.1
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCCC---ccceEEEecCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFV---PERTAAYISQHDNHIG 239 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 239 (1426)
..+|+|+|++|++||+++|+||||||||||+++|+|.+++. ...+|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 35899999999999999999999999999999999998741 123899999999875432 2357999999988889
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000556 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1426)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1426)
.+||+||+.++.+..+.... ..+....++++++.+||.+..+... +.
T Consensus 96 ~~tv~enl~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~ 142 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVKS--------------------------------KKELQERVRWALEKAQLWDEVKDRL-DA 142 (250)
T ss_pred CCcHHHHHHHHHHhccccCC--------------------------------HHHHHHHHHHHHHHcCCCcchhhhh-cC
Confidence 99999999986543211000 0011233567788899864211111 23
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
.+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++. .+ ++++.++|+..++.+.+|+|++|+
T Consensus 143 ~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~ 219 (250)
T PRK14247 143 PAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELK--KD-MTIVLVTHFPQQAARISDYVAFLY 219 (250)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEEEEEE
Confidence 455799999999999999999999999999999999999999999999874 24 455567788888889999999999
Q ss_pred CCeEEEecChhhHH
Q 000556 400 DGQIVYQGPRELVL 413 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1426)
+|++++.|+.+++.
T Consensus 220 ~G~i~~~g~~~~~~ 233 (250)
T PRK14247 220 KGQIVEWGPTREVF 233 (250)
T ss_pred CCeEEEECCHHHHH
Confidence 99999999988764
No 402
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-33 Score=318.63 Aligned_cols=214 Identities=19% Similarity=0.237 Sum_probs=174.7
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 904 (1426)
-+.++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..... +.+|+|.++|
T Consensus 20 ~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 86 (274)
T PRK14265 20 VFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRD 86 (274)
T ss_pred eEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECC
Confidence 588999998873 246999999999999999999999999999999999975321 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 975 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 975 (1426)
.++.. ..+++.++|++|+..+++. ||.||+.+....+. .. ...++.++++++.+++.. ..+..
T Consensus 87 ~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 158 (274)
T PRK14265 87 RNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK--- 158 (274)
T ss_pred EecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC---
Confidence 87632 2345679999999887764 99999987643321 11 122344677888888743 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 976 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 976 ~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
+..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 159 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 234 (274)
T PRK14265 159 --GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFN 234 (274)
T ss_pred --cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEe
Confidence 467999999999999999999999999999999999999999999999965 799999999986 5888999999997
Q ss_pred --------cCcEEEEEcCC
Q 000556 1056 --------RGGQEIYVGPL 1066 (1426)
Q Consensus 1056 --------~gg~~v~~G~~ 1066 (1426)
+.|+++..|+.
T Consensus 235 ~~~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 235 TEIDEYGKRRGKLVEFSPT 253 (274)
T ss_pred cccccccccCceEEEeCCH
Confidence 25899999986
No 403
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.8e-33 Score=358.95 Aligned_cols=210 Identities=21% Similarity=0.337 Sum_probs=179.6
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++++|++|.++. ++.+|+|+|++++|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 46999999999851 23599999999999999999999999999999999998774 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 976 (1426)
+++ ..+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+|+.+.. |+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 754 3567889999999999885 9999998752 122 23478889998877644 5556653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
..+||||||||++|||||+++|+||+||||||+||+.+++.|.+.|+++.+ ++|+|+++|+++ ....+|+|++|++
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~ 549 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR 549 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC
Confidence 467999999999999999999999999999999999999999999998864 699999999984 5678999999985
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 550 -G~i~~~G~~ 558 (592)
T PRK10790 550 -GQAVEQGTH 558 (592)
T ss_pred -CEEEEEcCH
Confidence 899999885
No 404
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.2e-33 Score=311.79 Aligned_cols=200 Identities=26% Similarity=0.398 Sum_probs=160.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCC--CCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHI--GEMT 242 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 242 (1426)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++. ..++.++|++|++.+. +.+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999999987 999999998764 2345799999987653 3489
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
|+||+.++...... .+.. . ..+....++.+++.+||++..++.+ .
T Consensus 87 v~e~l~~~~~~~~~--~~~~----------------~------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 131 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFRR----------------L------------SKADKAKVDEALERVGLSELADRQI-----G 131 (213)
T ss_pred HHHHHHhccccccc--cccC----------------C------------CHHHHHHHHHHHHHcCCHHHHhCCc-----c
Confidence 99999885431100 0000 0 0001224567889999987666554 4
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ . +++|+.++|+.+++.+++|+|++|++|
T Consensus 132 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 132 ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 6999999999999999999999999999999999999999999999865 3 445666788888999999999999886
Q ss_pred EEEec
Q 000556 403 IVYQG 407 (1426)
Q Consensus 403 iv~~G 407 (1426)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66654
No 405
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=359.63 Aligned_cols=213 Identities=22% Similarity=0.336 Sum_probs=179.6
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++++|++|.++. +++.+|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEE
Confidence 46999999999852 124699999999999999999999999999999999998764 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 976 (1426)
.++ ..+++.++||+|++.+++ -|++||+.++. +.+.+ ++.++++++.+++.+. .|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 654 346788999999999886 69999997641 21222 2347778888776543 46777764
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
+ .+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.||+|++|++
T Consensus 478 g-~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 G-VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred C-CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 3 6899999999999999999999999999999999999999999999875 4799999999985 5788999999985
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 554 -g~i~e~g~~ 562 (582)
T PRK11176 554 -GEIVERGTH 562 (582)
T ss_pred -CEEEEeCCH
Confidence 799998874
No 406
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-33 Score=319.91 Aligned_cols=210 Identities=24% Similarity=0.354 Sum_probs=170.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 36999999999999999999999999999999999999887 9999999987654322 35699999998888999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
||.||+.++..... .. . +. . . ......++.+++.+||++..++.++
T Consensus 101 tv~e~l~~~~~~~~-~~-~-------------~~-~-~-------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 146 (265)
T PRK10575 101 TVRELVAIGRYPWH-GA-L-------------GR-F-G-------------AADREKVEEAISLVGLKPLAHRLVD---- 146 (265)
T ss_pred cHHHHHHhCccccc-cc-c-------------cC-C-C-------------HHHHHHHHHHHHHcCCHHHhcCCcc----
Confidence 99999987532100 00 0 00 0 0 0012245678899999876666554
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++..+ ++|+.++|+.+++.+.+|+|++|++|
T Consensus 147 -~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~-~tiii~sH~~~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 147 -SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERG-LTVIAVLHDINMAARYCDYLVALRGG 224 (265)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 6999999999999999999999999999999999999999999999865334 44555778888999999999999999
Q ss_pred eEEEecChhhHH
Q 000556 402 QIVYQGPRELVL 413 (1426)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1426)
++++.|+.+++.
T Consensus 225 ~i~~~~~~~~~~ 236 (265)
T PRK10575 225 EMIAQGTPAELM 236 (265)
T ss_pred eEEEecCHHHhc
Confidence 999999987653
No 407
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.5e-33 Score=322.50 Aligned_cols=210 Identities=20% Similarity=0.293 Sum_probs=174.4
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++. +...+|+|||+.|++||+++|+|+||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4789999988742 12358999999999999999999999999999999999864 369999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 000556 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGL------PGV 978 (1426)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~------~~~ 978 (1426)
.. ...++.++|++|++.+++ .|++||+.... ... ++.++++++.+||.+..+..++. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 234667999999999887 49999995321 111 23478889999998776665431 234
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
..||+|||||++|||||+.+|+||+|||||+|||+.+...+++.|+++. .++|||+++|++. .+ ..+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 6799999999999999999999999999999999999999999999875 4899999999985 34 45999999985 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
+++++|+.
T Consensus 213 ~i~~~g~~ 220 (275)
T cd03289 213 KVRQYDSI 220 (275)
T ss_pred eEeecCCH
Confidence 99999986
No 408
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=9.3e-33 Score=314.84 Aligned_cols=220 Identities=24% Similarity=0.296 Sum_probs=175.7
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++ .+.+|+|||+++++||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 378999988763 2359999999999999999999999999999999999621124589999999876
Q ss_pred Ccc---cccc-eEEEeccCCCCCCCCCHHHHHHHHHHhcCC----CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000556 908 KQE---TFAR-ISGYCEQNDIHSPFVTVYESLLYSAWLRLP----PEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 978 (1426)
Q Consensus 908 ~~~---~~~~-~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~----~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 978 (1426)
... ..++ .++|++|++.+++.+|+.+++.+....... .+.......+++.++++.+++. +..+..++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 432 1222 478999999999999999998765432110 0111222345678899999997 35555432
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhh-cceEEEEecC
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDA-FDELFLMKRG 1057 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~-fD~v~ll~~g 1057 (1426)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEeC-
Confidence 259999999999999999999999999999999999999999999999877999999999986 34454 799999985
Q ss_pred cEEEEEcCC
Q 000556 1058 GQEIYVGPL 1066 (1426)
Q Consensus 1058 g~~v~~G~~ 1066 (1426)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 799999875
No 409
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-33 Score=321.00 Aligned_cols=208 Identities=24% Similarity=0.327 Sum_probs=168.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCC-CCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1426)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+...+|+|.++|.++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 358999999999999999999999999999999999998862123999999998764322 357899999974 6778
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
.||+||+.|..+..+.. ..+...+++.+++.+||++..++.+
T Consensus 100 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~---- 141 (282)
T PRK13640 100 ATVGDDVAFGLENRAVP----------------------------------RPEMIKIVRDVLADVGMLDYIDSEP---- 141 (282)
T ss_pred CCHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCCc----
Confidence 99999998864322110 0011234567889999987666544
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.| |+.++|..+++ ..+|++++|++
T Consensus 142 -~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~t-vli~tH~~~~~-~~~d~i~~l~~ 218 (282)
T PRK13640 142 -ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLT-VISITHDIDEA-NMADQVLVLDD 218 (282)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHH-HhCCEEEEEEC
Confidence 5799999999999999999999999999999999999999999999986533444 55566776776 57999999999
Q ss_pred CeEEEecChhhHH
Q 000556 401 GQIVYQGPRELVL 413 (1426)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1426)
|++++.|+++++.
T Consensus 219 G~i~~~g~~~~~~ 231 (282)
T PRK13640 219 GKLLAQGSPVEIF 231 (282)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998775
No 410
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=3.4e-33 Score=312.59 Aligned_cols=203 Identities=22% Similarity=0.370 Sum_probs=167.5
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
-+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 478999998763 2469999999999999999999999999999999999765 3489999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000556 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSg 983 (1426)
.. ..+++.++|++|++.+++ .|++||+.+....+.. .. .++.++++++.+++. ...++. +..||+
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---QP--DPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---Ch--HHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 43 124567899999988877 5999999875443211 11 124578899999996 355555 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|++. ++ +.+|++++|++.+
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~ 214 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHA 214 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEeccc
Confidence 9999999999999999999999999999999999999999998764 899999999986 35 5699999996433
No 411
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=347.92 Aligned_cols=216 Identities=28% Similarity=0.328 Sum_probs=180.2
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.++++|+++.++ ++.+|+|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQP--DAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEC
Confidence 378899988773 24699999999999999999999999999999999998653 479999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000556 908 KQE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 983 (1426)
Q Consensus 908 ~~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 983 (1426)
... .+++.+||++|++.+++.+||.||+.+....+.....+..+.++.++++++.++|.+..+..+ ..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCH
Confidence 421 234578999999988999999999987532111111223344567889999999987666653 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEE
Q 000556 984 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1063 (1426)
Q Consensus 984 GqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~ 1063 (1426)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999986 57788999999986 687766
Q ss_pred cC
Q 000556 1064 GP 1065 (1426)
Q Consensus 1064 G~ 1065 (1426)
++
T Consensus 222 ~~ 223 (501)
T PRK11288 222 FD 223 (501)
T ss_pred cC
Confidence 54
No 412
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=5.3e-33 Score=315.17 Aligned_cols=213 Identities=25% Similarity=0.319 Sum_probs=168.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCceeEEEEcCccCCCCCc----cceEEEecCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKL--DSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 238 (1426)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|.++..... +..++|++|++..+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 46999999999999999999999999999999999995 566 9999999988765432 23489999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc-ccccccc
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV-CADTMVG 317 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vG 317 (1426)
+.+|++|++.+......... .+. ..+ ..+....++.+++.+||++ ..++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~----------~~~------~~~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSAR----------GEE------PLD-----------LLDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhccc----------ccc------ccc-----------HHHHHHHHHHHHHHcCCchhhcccccc
Confidence 99999999988643211000 000 000 0011234677899999973 5554443
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhh-cCeEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDL-FDDII 396 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~-fD~vi 396 (1426)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+ ++|+.++|+.+++... +|+|+
T Consensus 143 ----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~vsH~~~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 ----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PD-RSFLIITHYQRLLNYIKPDYVH 216 (243)
T ss_pred ----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CC-cEEEEEEecHHHHHhhcCCeEE
Confidence 14999999999999999999999999999999999999999999999854 34 4555577777888887 79999
Q ss_pred EecCCeEEEecChhhHH
Q 000556 397 LLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1426)
+|++|++++.|+.+++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999988654
No 413
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2e-33 Score=355.94 Aligned_cols=212 Identities=28% Similarity=0.425 Sum_probs=179.9
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++|+|++|.++. +++.+|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p--~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDP--QQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 46999999999852 123599999999999999999999999999999999998763 48999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc------cccccCCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI------QSLVGLPG 977 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~------~~~vg~~~ 977 (1426)
+.+ ..+++.++||+|++.+++ .|++||+.++. + +. .++.++++++.+++.+.. |+.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~----~~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA----P-NA----SDEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC----C-cc----CHHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 654 346778999999998886 59999997742 1 12 234578899999997654 5666654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 978 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 978 ~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
...||||||||++|||+|+++|+||+||||||+||+.++..+++.|+++. +|+|+|+++|+++ ....+|++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-
Confidence 46899999999999999999999999999999999999999999999885 4899999999986 3567999999985
Q ss_pred cEEEEEcCC
Q 000556 1058 GQEIYVGPL 1066 (1426)
Q Consensus 1058 g~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 549 G~i~~~g~~ 557 (574)
T PRK11160 549 GQIIEQGTH 557 (574)
T ss_pred CeEEEeCCH
Confidence 799998874
No 414
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-32 Score=317.51 Aligned_cols=205 Identities=21% Similarity=0.288 Sum_probs=168.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC---ccceEEEecCCCC-CCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV---PERTAAYISQHDN-HIGE 240 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1426)
..+|+|+|+++++||+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999987 999999998875432 2457999999974 6778
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
.||.||+.++....+.. + .+....++.+++.+||.+..++.+
T Consensus 97 ~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 138 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP-R---------------------------------EEMIKRVDEALLAVNMLDFKTREP---- 138 (277)
T ss_pred CCHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCHhHhhCCc----
Confidence 89999998764322110 0 001124577888999987666544
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.| |+.++|..+++. .+|+|++|++
T Consensus 139 -~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~t-iil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 139 -ARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLT-VLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEeCCHHHHH-hCCEEEEEEC
Confidence 5799999999999999999999999999999999999999999999886533444 555777777775 6999999999
Q ss_pred CeEEEecChhhHH
Q 000556 401 GQIVYQGPRELVL 413 (1426)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1426)
|+++..|+.+++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 415
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-33 Score=298.97 Aligned_cols=168 Identities=28% Similarity=0.415 Sum_probs=148.6
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
.++|+++.++ ...+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKP--DSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEccc
Confidence 5677777653 23599999999999999999999999999999999998653 48999999987643
Q ss_pred --ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000556 910 --ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1426)
Q Consensus 910 --~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 987 (1426)
..+++.++|++|++.+++..|+.|++. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999998888899999873 8999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 988 Rl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|++. ++.+.+|++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877999999999986 577789999999864
No 416
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=5.7e-33 Score=318.64 Aligned_cols=207 Identities=20% Similarity=0.246 Sum_probs=169.1
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCC--CCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN--HIG 239 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 239 (1426)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999987 9999999988753221 246999999874 567
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-ccccccccC
Q 000556 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTMVGD 318 (1426)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vG~ 318 (1426)
.+||.|++.+..+....... .+....++.+++.+||. +..++.
T Consensus 103 ~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 146 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLEP---------------------------------EQREKQIIETLRQVGLLPDHASYY--- 146 (267)
T ss_pred chhHHHHHHHHHHhccCCCH---------------------------------HHHHHHHHHHHHHcCCChHHHhcC---
Confidence 88999999876542210000 01122456789999994 455544
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+.. +++|+.++|+.+++.+++|+|++|
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 147 --PHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQ-GISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred --chhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHhcCEEEEE
Confidence 34799999999999999999999999999999999999999999999986533 445555788888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000556 399 SDGQIVYQGPRELVL 413 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1426)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 417
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-33 Score=318.90 Aligned_cols=209 Identities=23% Similarity=0.374 Sum_probs=171.4
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 45999999999999999999999999999999999999987 9999999988754332 34689999999888899
Q ss_pred CHHHHHHHhhhh-cCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 242 TVRETLAFSARC-QGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 242 TV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
||+||+.++..- ...... . . ......++.+++.+||++..++.
T Consensus 97 tv~~~~~~~~~~~~~~~~~----------------~--~-------------~~~~~~~~~~l~~~~l~~~~~~~----- 140 (265)
T PRK10253 97 TVQELVARGRYPHQPLFTR----------------W--R-------------KEDEEAVTKAMQATGITHLADQS----- 140 (265)
T ss_pred cHHHHHHhCcccccccccC----------------C--C-------------HHHHHHHHHHHHHcCCHHHhcCC-----
Confidence 999999875310 000000 0 0 00112456788999998766654
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
++.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|+|++|++
T Consensus 141 ~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~-~~tiii~tH~~~~~~~~~d~i~~l~~ 219 (265)
T PRK10253 141 VDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREK-GYTLAAVLHDLNQACRYASHLIALRE 219 (265)
T ss_pred cccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999986533 44555577888899999999999999
Q ss_pred CeEEEecChhhHH
Q 000556 401 GQIVYQGPRELVL 413 (1426)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1426)
|++++.|+.+++.
T Consensus 220 G~i~~~g~~~~~~ 232 (265)
T PRK10253 220 GKIVAQGAPKEIV 232 (265)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 418
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=8.4e-33 Score=315.33 Aligned_cols=215 Identities=26% Similarity=0.292 Sum_probs=173.3
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc-
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP- 906 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~- 906 (1426)
.+.++|+++.++ ...+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAP--DHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEEecccc
Confidence 377889888763 23589999999999999999999999999999999998663 47999999976
Q ss_pred ----CCcc-------cccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000556 907 ----KKQE-------TFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSL 972 (1426)
Q Consensus 907 ----~~~~-------~~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 972 (1426)
+... ..++.++|++|++. ..+.+|+.|++.+..... .. .......+.++++++.+++.+ ..++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 3221 11346899999974 345679999986542211 11 111233456889999999963 55555
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceE
Q 000556 973 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDEL 1051 (1426)
Q Consensus 973 vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v 1051 (1426)
+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++
T Consensus 146 -----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 -----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred -----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998764 899999999986 577789999
Q ss_pred EEEecCcEEEEEcCC
Q 000556 1052 FLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1052 ~ll~~gg~~v~~G~~ 1066 (1426)
++|++ |++++.|+.
T Consensus 220 ~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 220 LVMQQ-GRVVESGLT 233 (253)
T ss_pred EEEEC-CEEEEECCH
Confidence 99985 789988874
No 419
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-33 Score=312.02 Aligned_cols=201 Identities=23% Similarity=0.381 Sum_probs=168.0
Q ss_pred cceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCHHHHHH
Q 000556 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1426)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1426)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999987 9999999998764332 357999999998999999999998
Q ss_pred HhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCChhH
Q 000556 249 FSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGE 328 (1426)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGq 328 (1426)
++... ..... ......++.+++.+||++..++.+ +.|||||
T Consensus 94 ~~~~~-~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLKLN---------------------------------AAQREKLHAIARQMGIEDLLARLP-----GQLSGGQ 134 (232)
T ss_pred ccccc-ccCCC---------------------------------HHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHH
Confidence 75321 00000 001224577899999987777655 4699999
Q ss_pred hhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecC
Q 000556 329 RKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1426)
Q Consensus 329 rqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~~G~ 408 (1426)
|||++||++++.+|++++|||||+|||..++..+.+.|+++.+..+. +|+.++|+..++.+++|+|++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~-tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQL-TLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCC-EEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999988653344 45557788888999999999999999999999
Q ss_pred hhhHH
Q 000556 409 RELVL 413 (1426)
Q Consensus 409 ~~~~~ 413 (1426)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 88764
No 420
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-33 Score=317.11 Aligned_cols=218 Identities=19% Similarity=0.250 Sum_probs=174.1
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--G-YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g 904 (1426)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 478999988773 24699999999999999999999999999999999996431 1 2579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 979 (1426)
.++.. ...++.++|++|++.+++ .|+.||+.+....+. .. ...++.++++++.+++.+..+.... ..+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLK-QSGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhc-CCcc
Confidence 87531 234567899999988877 499999987653321 11 1233456778888887532111111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec---
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR--- 1056 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~--- 1056 (1426)
.||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999976 589999999986 68899999999982
Q ss_pred -----CcEEEEEcCC
Q 000556 1057 -----GGQEIYVGPL 1066 (1426)
Q Consensus 1057 -----gg~~v~~G~~ 1066 (1426)
.|+++..|+.
T Consensus 229 ~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 229 EGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccCceEEEeCCH
Confidence 4799998875
No 421
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-33 Score=323.51 Aligned_cols=205 Identities=20% Similarity=0.293 Sum_probs=166.1
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCC----C----CccceEEEecCCCC-
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGE----F----VPERTAAYISQHDN- 236 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----~----~~~~~~~yv~Q~d~- 236 (1426)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 5899999999999999999999999999999999999987 9999999987642 1 12357999999863
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc-cccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTM 315 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1426)
.+...||+||+.|+....+... .+....++.+++.++|+ +..++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGENK----------------------------------QEAYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhHhcCC
Confidence 2334699999988643221100 00112356678889994 455544
Q ss_pred ccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeE
Q 000556 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1426)
Q Consensus 316 vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~v 395 (1426)
++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.+++|+|
T Consensus 148 -----~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 148 -----PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEY-KKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred -----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEE
Confidence 45799999999999999999999999999999999999999999999886533 445555788888899999999
Q ss_pred EEecCCeEEEecChhhHH
Q 000556 396 ILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1426)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 422
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=357.33 Aligned_cols=209 Identities=24% Similarity=0.405 Sum_probs=166.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
.++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 45899999999999999999999999999999999999998 9999999999877654 467999999987775 6
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
|++|||.++..-. ...+.+.+.++ ..+ .++.++ .|++..||.+|+.+
T Consensus 432 Ti~~Ni~~~~~~~---~~~~~i~~al~---------------------~~~------l~~~i~--~lp~Gldt~ig~~g- 478 (582)
T PRK11176 432 TIANNIAYARTEQ---YSREQIEEAAR---------------------MAY------AMDFIN--KMDNGLDTVIGENG- 478 (582)
T ss_pred hHHHHHhcCCCCC---CCHHHHHHHHH---------------------HhC------cHHHHH--hcccccCceeCCCC-
Confidence 9999998853100 00011111110 000 111222 36677899999865
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
+.||||||||++|||||+++|++++||||||+||+.++..+.+.|+++. .++|+|+ ++|.. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~~~tvI~-VtHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ--KNRTSLV-IAHRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-HHHHhCCEEEEEECC
Confidence 4799999999999999999999999999999999999999999998863 3456555 45544 567789999999999
Q ss_pred eEEEecChhhHHH
Q 000556 402 QIVYQGPRELVLE 414 (1426)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1426)
+++++|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999998864
No 423
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=314.11 Aligned_cols=216 Identities=23% Similarity=0.312 Sum_probs=175.1
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCC--c--eEEEEEEEc
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--G--YITGNITIS 903 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~--~~~G~i~i~ 903 (1426)
.+.++++++++. ++.+|+||||++++||+++|+|+||||||||+++|+|...+ | .+.|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 378899888763 34699999999999999999999999999999999997542 2 123666666
Q ss_pred CccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000556 904 GYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGLP 976 (1426)
Q Consensus 904 g~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 976 (1426)
|.+... ...++.++|++|++.+++.+|++||+.+...... ....++..+.++++++.+++.+ ..+..
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 150 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP---- 150 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC----
Confidence 665432 2345678999999999999999999988643321 1122334456889999999964 23332
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
+..||+|||||++|||+|+.+|++|+|||||+|||..+...+.+.|+++.+ ++|||+++|++. .+.+.+|++++|++
T Consensus 151 -~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~ 227 (257)
T PRK14246 151 -ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN 227 (257)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 467999999999999999999999999999999999999999999999864 699999999986 57789999999985
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 228 -g~i~~~g~~ 236 (257)
T PRK14246 228 -GELVEWGSS 236 (257)
T ss_pred -CEEEEECCH
Confidence 799888875
No 424
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=5.1e-33 Score=318.62 Aligned_cols=216 Identities=23% Similarity=0.317 Sum_probs=171.7
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC--------ccceEEEecCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--------PERTAAYISQHDN 236 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--------~~~~~~yv~Q~d~ 236 (1426)
..+|+|+|+++++||+++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 45899999999999999999999999999999999999875223699999998774321 1346899999998
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1426)
+++.+||+||+.+...... . ..... ... . ..+.+..++.+++.+||++..|..+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~--~-------~~~~~--~~~-~--------------~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGST--P-------FWRTC--FSW-F--------------TREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhcccc--c-------chhhh--ccc-c--------------cHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 8999999999987642100 0 00000 000 0 0011234677899999987777654
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
..|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++.. +++||.++|+.+++.+++|+|+
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 4699999999999999999999999999999999999999999999986533 4555657888888999999999
Q ss_pred EecCCeEEEecChhhH
Q 000556 397 LLSDGQIVYQGPRELV 412 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~ 412 (1426)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999998764
No 425
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.6e-33 Score=355.29 Aligned_cols=206 Identities=21% Similarity=0.277 Sum_probs=166.5
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1426)
++|+|+|++++|||.++|+|+||||||||+++|+|.++|+ +|+|.+||.++++..+ ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 4899999999999999999999999999999999999998 9999999999887654 4789999999987775 9
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
++|||.++.. . + .+.+.+.++. . -.++.++ .|++..||.+|+.+ .
T Consensus 431 i~~NI~~~~~---~-~-d~~i~~a~~~---~------------------------gl~~~i~--~lp~Gldt~i~e~g-~ 475 (592)
T PRK10790 431 FLANVTLGRD---I-S-EEQVWQALET---V------------------------QLAELAR--SLPDGLYTPLGEQG-N 475 (592)
T ss_pred HHHHHHhCCC---C-C-HHHHHHHHHH---c------------------------CcHHHHH--hccccccccccCCC-C
Confidence 9999998631 1 0 1111111110 0 0111222 25667899999865 4
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
.||||||||++|||||+++|++++||||||+||+.+...|.+.|+++. .++|+|+..|++ +....+|+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~--~~~tvIivtHr~--~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR--EHTTLVVIAHRL--STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--CCCEEEEEecch--HHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999999864 346666644443 5667799999999999
Q ss_pred EEEecChhhHHH
Q 000556 403 IVYQGPRELVLE 414 (1426)
Q Consensus 403 iv~~G~~~~~~~ 414 (1426)
++..|+++++.+
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 426
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.4e-33 Score=307.62 Aligned_cols=197 Identities=28% Similarity=0.373 Sum_probs=164.7
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
++++|++..++ ++.+|+|+|++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 67788887663 2469999999999999999999999999999999999865 34799999998753
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000556 909 QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 988 (1426)
Q Consensus 909 ~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 988 (1426)
....++.++|++|++.+++..|+.|++.+....+. .. ++.++++++.+||.+..+..+ +.||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22245678999999888888999999987543321 11 234789999999987666653 5799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 989 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 989 l~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++. . |+++.+.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~-~-~~~~~~~ 199 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLP-G-ARELDLG 199 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhc-c-CcEEeec
Confidence 99999999999999999999999999999999999998878999999999986 343 3 8887774
No 427
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=3.8e-33 Score=304.12 Aligned_cols=178 Identities=26% Similarity=0.327 Sum_probs=150.6
Q ss_pred eEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc-----ccccceEEEeccCCC-CCC
Q 000556 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-----ETFARISGYCEQNDI-HSP 927 (1426)
Q Consensus 854 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~q~~~-~~~ 927 (1426)
+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRP--QSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 4699999999999999999999999999999999998663 48999999987531 123567899999973 233
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCC
Q 000556 928 FVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1007 (1426)
Q Consensus 928 ~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEP 1007 (1426)
..||+||+.+..... ..+.+...+.++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|+||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 479999998865432 1233444556889999999988777764 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000556 1008 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPG 1041 (1426)
Q Consensus 1008 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~ 1041 (1426)
|+|||+.++..+.+.|++++++|+|||+++|++.
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999999877999999999975
No 428
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-33 Score=314.25 Aligned_cols=219 Identities=21% Similarity=0.286 Sum_probs=176.1
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 904 (1426)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.+||
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 367888887763 2469999999999999999999999999999999999643 1 12579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 979 (1426)
.++.. ...++.++|++|++.+++. |+.||+.+..... ...+.+...+++.++++.+++.+....... ....
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIH--GEDDEDFIEERVEESLKAAALWDEVKDKLD-KSAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhc--CCCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCcc
Confidence 87642 1235679999999988875 9999998764322 111223345668889999998543222221 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.||+|||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ |+|||+++|++. ++.+.+|++++|++ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 8999999999999999999999999999999999999999999999864 899999999986 68889999999985 79
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
+++.|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 9998874
No 429
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-33 Score=315.82 Aligned_cols=213 Identities=21% Similarity=0.309 Sum_probs=167.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCC--CCC---ccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMG--EFV---PERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~--~~~---~~~~~~yv~Q~d~~ 237 (1426)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++. ... .++.++|++|++.+
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (253)
T PRK14267 17 NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNP 96 (253)
T ss_pred eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCcc
Confidence 35899999999999999999999999999999999998762 123899999999875 221 23579999999989
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++.+||+||+.++....+..... .+....++.+++.+||........
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 143 (253)
T PRK14267 97 FPHLTIYDNVAIGVKLNGLVKSK--------------------------------KELDERVEWALKKAALWDEVKDRL- 143 (253)
T ss_pred CCCCcHHHHHHHHHHhcCccCCH--------------------------------HHHHHHHHHHHHHcCCccchhhhh-
Confidence 99999999998865322110000 001123456778888743111111
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+..++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|+.+++.+++|+|++
T Consensus 144 ~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~ 220 (253)
T PRK14267 144 NDYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAF 220 (253)
T ss_pred ccChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEE
Confidence 234567999999999999999999999999999999999999999999998753 3 4555577888889999999999
Q ss_pred ecCCeEEEecChhhHH
Q 000556 398 LSDGQIVYQGPRELVL 413 (1426)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1426)
|++|++++.|+.+++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 221 LYLGKLIEVGPTRKVF 236 (253)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 430
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=9.5e-33 Score=311.47 Aligned_cols=206 Identities=27% Similarity=0.408 Sum_probs=171.0
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-cceEEEecCCCCCCCCCCH
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1426)
+++|+|+|+++.+||+++|+||||||||||+++|+|.++|. +|+|.++|.++..... ++.++|++|++..++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 46999999999999999999999999999999999999887 9999999988764333 3579999999988889999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.+..+..+... ......++.+++.+++....++.+ +.
T Consensus 90 ~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (237)
T TIGR00968 90 RDNIAFGLEIRKHPK----------------------------------AKIKARVEELLELVQLEGLGDRYP-----NQ 130 (237)
T ss_pred HHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 999987654321100 001123467788899976666544 46
Q ss_pred CChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000556 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~i 403 (1426)
||||||||++||++++.+|++++|||||+|||..+...+.+.|++++...+.|+|+ ++|...++.+++|+|++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli-~sH~~~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVF-VTHDQEEAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEE-EeCCHHHHHhhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999876532445444 66777888999999999999999
Q ss_pred EEecChhhHH
Q 000556 404 VYQGPRELVL 413 (1426)
Q Consensus 404 v~~G~~~~~~ 413 (1426)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999988764
No 431
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.9e-32 Score=312.22 Aligned_cols=206 Identities=24% Similarity=0.282 Sum_probs=165.6
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CceeEEEEcCccCCCCCc-cceEEEecCCCC--CCCCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL-KVSGRVTYNGHDMGEFVP-ERTAAYISQHDN--HIGEM 241 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~l 241 (1426)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|.. ..+|+|.++|.++..... ++.++||+|++. +.+.+
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 48999999999999999999999999999999999998710 028999999988753322 256999999974 44667
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc---cccccccC
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV---CADTMVGD 318 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~vG~ 318 (1426)
|+.+++.+.+...+.. .....++.+++.+||.+ ..++
T Consensus 97 ~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~l~~~~l~~~~~~~~~---- 136 (254)
T PRK10418 97 TMHTHARETCLALGKP------------------------------------ADDATLTAALEAVGLENAARVLKL---- 136 (254)
T ss_pred cHHHHHHHHHHHcCCC------------------------------------hHHHHHHHHHHHcCCCChhhhhhc----
Confidence 9999887643221100 00123566788999975 2333
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
.+..|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++++.. +++|+.++|+.+++.+.+|++++|
T Consensus 137 -~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~til~~sH~~~~~~~~~d~v~~l 214 (254)
T PRK10418 137 -YPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKR-ALGMLLVTHDMGVVARLADDVAVM 214 (254)
T ss_pred -CCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhCCEEEEE
Confidence 345799999999999999999999999999999999999999999999986533 445555778888888999999999
Q ss_pred cCCeEEEecChhhHH
Q 000556 399 SDGQIVYQGPRELVL 413 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1426)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 215 SHGRIVEQGDVETLF 229 (254)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999988764
No 432
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-33 Score=328.71 Aligned_cols=211 Identities=24% Similarity=0.371 Sum_probs=179.5
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.++++||+++|+.+ ..++|+|+|+++++||.+||+|+||||||||+++|+|-.. +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 68999999999743 3469999999999999999999999999999999999765 4589999999886
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc-------ccCCC
Q 000556 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSL-------VGLPG 977 (1426)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~-------vg~~~ 977 (1426)
.. ...++.+++++|...++. -|+++||.++. | +.+ ++.++++++.+||++..... +|. +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~----~-~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLAN----P-DAS----DEELWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcC----C-CCC----HHHHHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 54 235667899999887765 69999997642 2 222 34588999999998866544 554 4
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 978 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 978 ~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
.+.||||||||++|||+|++|.++++|||||.|||+.|+++|++.|.+.++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 578999999999999999999999999999999999999999999998764 899999999976 4688999999985
Q ss_pred cEEEEEcCC
Q 000556 1058 GQEIYVGPL 1066 (1426)
Q Consensus 1058 g~~v~~G~~ 1066 (1426)
|+++..|..
T Consensus 548 Gkiie~G~~ 556 (573)
T COG4987 548 GKIIEEGTH 556 (573)
T ss_pred CeeeecCCH
Confidence 899999875
No 433
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-33 Score=307.52 Aligned_cols=202 Identities=25% Similarity=0.297 Sum_probs=182.9
Q ss_pred eEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcc-------cccceEEEeccCCCCC
Q 000556 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE-------TFARISGYCEQNDIHS 926 (1426)
Q Consensus 854 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-------~~~~~~gyv~q~~~~~ 926 (1426)
..-++|+|++++.||+..|||-||||||||+++|.+... +..|+|.++|.++... ..++.++.|+|+..++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 456899999999999999999999999999999999876 4589999999875431 1346789999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeC
Q 000556 927 PFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1006 (1426)
Q Consensus 927 ~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDE 1006 (1426)
|+.||.||..|+..++ .+++++++++..++|+.+||....+..+ .+||||+||||.|||||+.+|+||+|||
T Consensus 119 PhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999999998776 5678899999999999999999999884 6899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCC
Q 000556 1007 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1426)
Q Consensus 1007 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~ 1067 (1426)
|.|.|||--+..+++.|.++.++ ++|||++|||.. |.+..-|||.+|+ +|++|-.|...
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~ 250 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPE 250 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHH
Confidence 99999999999999999998765 899999999997 7889999999998 58999999863
No 434
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.4e-33 Score=366.77 Aligned_cols=211 Identities=24% Similarity=0.369 Sum_probs=178.0
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++++||+|+|+. ++.+|+|+|++|+|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 472 ~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p--~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQA--RSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEECCEE
Confidence 46999999999851 23599999999999999999999999999999999998764 58999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 976 (1426)
+.+ ..+++.+|||+|++.+++ -|++||+.++.. .+.+ ++.++++++..++.+. .|+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~l~~~----~~~~----~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFS-GSILENLLLGAK----ENVS----QDEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehh-HHHHHHHhccCC----CCCC----HHHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 654 456788999999999886 499999976421 1222 2346778887777653 36667654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999985 4899999999986 5688999999986
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 799999884
No 435
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-33 Score=346.11 Aligned_cols=206 Identities=24% Similarity=0.314 Sum_probs=173.6
Q ss_pred eEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEeccCCCCCCCC
Q 000556 854 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQNDIHSPFV 929 (1426)
Q Consensus 854 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~~~~~~l 929 (1426)
+.+|+|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.... ..++.++|++|++..++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 4699999999999999999999999999999999998653 489999999876421 2345689999999888899
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCC
Q 000556 930 TVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1009 (1426)
Q Consensus 930 Tv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTs 1009 (1426)
||+|++.+..........+.+...+.++++++.+++.+..++.+ ..|||||||||+||++|+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 99999987532111111123334456889999999987777764 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCCc
Q 000556 1010 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGR 1068 (1426)
Q Consensus 1010 gLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~~ 1068 (1426)
|||+.+...+.+.|+++++.|+|||+++|++. ++.+.||++++|++ |+++..|+...
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 99999999999999999888999999999986 57788999999986 79999888643
No 436
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-32 Score=314.02 Aligned_cols=211 Identities=20% Similarity=0.288 Sum_probs=167.6
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCCC-----ccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFV-----PERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1426)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35899999999999999999999999999999999998641 123899999999875321 14579999999877
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++ .||+||+.++.+..+.... .+....++.+++.+||.+..+...
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~i~~~~- 157 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKDK---------------------------------KVLDEIVETSLKQAALWDQVKDDL- 157 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCchhhhhh-
Confidence 77 6999999886532211000 001123556788888864322222
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+..++.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++. .+ ++|+.++|+.+++.++||+|++
T Consensus 158 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~ 234 (267)
T PRK14237 158 HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK--KN-YTIIIVTHNMQQAARASDYTAF 234 (267)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhcCEEEE
Confidence 34566899999999999999999999999999999999999999999999874 24 4555577888889999999999
Q ss_pred ecCCeEEEecChhhHH
Q 000556 398 LSDGQIVYQGPRELVL 413 (1426)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1426)
|++|++++.|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999998764
No 437
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=7.3e-33 Score=314.31 Aligned_cols=197 Identities=25% Similarity=0.372 Sum_probs=168.1
Q ss_pred EeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc---ccccceEEEeccCCCCCCCCCHH
Q 000556 856 LLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTVY 932 (1426)
Q Consensus 856 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv~ 932 (1426)
+|+||||++++||+++|+|+||||||||+++|+|... .+|+|.++|.+... ...++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999764 27999999987643 12345689999998888889999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCCeEEEe
Q 000556 933 ESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1005 (1426)
Q Consensus 933 e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~-------~p~iLlLD 1005 (1426)
||+.+.... ..+.....+.++++++.++|.+..++.+ ..||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 1122333456889999999987777653 5799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1006 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1006 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
|||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999877999999999986 57889999999985 789998875
No 438
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-32 Score=313.75 Aligned_cols=210 Identities=18% Similarity=0.249 Sum_probs=164.7
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCC--C---ccceEEEecCCCCCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF--V---PERTAAYISQHDNHI 238 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~~~ 238 (1426)
++|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|.++... . .++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 58999999999999999999999999999999999986 2111389999999887421 1 135799999998777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+ .||+||+.++......... .+....++++++.+||........ +
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 151 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLSR---------------------------------AEMDERVEWALTKAALWNEVKDKL-H 151 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCCH---------------------------------HHHHHHHHHHHHHcCCChhhHHHH-h
Confidence 7 8999999886532210000 001123566788888742111111 2
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
.....||||||||++||+||+.+|++++|||||+|||..+...+.+.|+++. .+ ++||.++|+..++.+++|+|++|
T Consensus 152 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l 228 (260)
T PRK10744 152 QSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK--QD-YTVVIVTHNMQQAARCSDYTAFM 228 (260)
T ss_pred cCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCEEEEE
Confidence 3345799999999999999999999999999999999999999999999874 24 45556778888888999999999
Q ss_pred cCCeEEEecChhhHH
Q 000556 399 SDGQIVYQGPRELVL 413 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1426)
++|+++..|+.+++.
T Consensus 229 ~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 229 YLGELIEFGNTDTIF 243 (260)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 439
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.8e-31 Score=343.62 Aligned_cols=123 Identities=23% Similarity=0.292 Sum_probs=101.0
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCCeEE
Q 000556 928 FVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGVSGLSTEQRKRLTIAVELVA---NPSIIF 1003 (1426)
Q Consensus 928 ~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~iA~~L~~---~p~iLl 1003 (1426)
.+||.|.+.|...+. .. ....++++.+||... .+.. ...|||||+||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~i------~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---SI------SRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---ch------hHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 467888887765432 11 124578889999753 3444 35799999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe-----cCcEEEEEcCC
Q 000556 1004 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK-----RGGQEIYVGPL 1066 (1426)
Q Consensus 1004 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~-----~gg~~v~~G~~ 1066 (1426)
|||||+|||+.....+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999985 346799999994 57899999875
No 440
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-33 Score=316.66 Aligned_cols=209 Identities=25% Similarity=0.382 Sum_probs=170.3
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|+...++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 46999999999999999999999999999999999999887 9999999987654322 34699999998888889
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
||.||+.++..... ..+ ... ..+....++.+++.+||++..++.+
T Consensus 92 tv~~~i~~~~~~~~--~~~----------------~~~------------~~~~~~~~~~~l~~~~l~~~~~~~~----- 136 (255)
T PRK11231 92 TVRELVAYGRSPWL--SLW----------------GRL------------SAEDNARVNQAMEQTRINHLADRRL----- 136 (255)
T ss_pred cHHHHHHhccchhh--hhc----------------cCC------------CHHHHHHHHHHHHHcCCHHHHcCCc-----
Confidence 99999988531000 000 000 0001234567888999987766654
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
+.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.. . +++|+.++|+.+++.+++|++++|++|
T Consensus 137 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~-~~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 137 TDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-Q-GKTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEECCHHHHHHhcCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 3 445555778888999999999999999
Q ss_pred eEEEecChhhHH
Q 000556 402 QIVYQGPRELVL 413 (1426)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1426)
++++.|+.+++.
T Consensus 215 ~i~~~~~~~~~~ 226 (255)
T PRK11231 215 HVMAQGTPEEVM 226 (255)
T ss_pred eEEEEcCHHHhc
Confidence 999999987753
No 441
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=6.8e-33 Score=304.07 Aligned_cols=194 Identities=24% Similarity=0.275 Sum_probs=161.2
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
.++|+++.++ .+.+|+|+|+.+++||+++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (198)
T TIGR01189 2 AARNLACSRG-------------ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRP--DSGEVRWNGTALAE 66 (198)
T ss_pred EEEEEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEEccc
Confidence 4667776653 34699999999999999999999999999999999998653 47999999987543
Q ss_pred --ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000556 910 --ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1426)
Q Consensus 910 --~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 987 (1426)
..+++.++|++|++.+++.+|+.|++.+....+. . + ++.++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 134 (198)
T TIGR01189 67 QRDEPHRNILYLGHLPGLKPELSALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQR 134 (198)
T ss_pred chHHhhhheEEeccCcccccCCcHHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHH
Confidence 2244678999999888888999999987644321 1 1 235788999999998777764 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEE
Q 000556 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFL 1053 (1426)
Q Consensus 988 Rl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~l 1053 (1426)
|++||++|+.+|++|+|||||+|||+.+...+++.|++++++|.|||+++|++.. -.+++++.
T Consensus 135 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~---~~~~~~~~ 197 (198)
T TIGR01189 135 RLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLG---LVEARELR 197 (198)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccc---ccceEEee
Confidence 9999999999999999999999999999999999999987789999999999852 23466654
No 442
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.5e-33 Score=366.81 Aligned_cols=210 Identities=26% Similarity=0.396 Sum_probs=177.5
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++++||+|+|+. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 46999999999852 124699999999999999999999999999999999998764 48999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 976 (1426)
+++ ..+++.+|||+|++.++. .|++||+.++. + +.+ ++.++++++..++.+.. |+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~----~-~~~----~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD----P-TIP----DADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC----C-CCC----HHHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 654 346888999999998885 69999997631 1 222 23477888888876643 5566654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|+++|+++ ....+|+|++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 468999999999999999999999999999999999999999999986 4899999999985 5677999999985
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 799999984
No 443
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=8.7e-33 Score=315.59 Aligned_cols=208 Identities=28% Similarity=0.417 Sum_probs=170.4
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
..+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 46999999999999999999999999999999999999987 9999999988765432 34689999998778889
Q ss_pred CHHHHHHHhhh-hcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000556 242 TVRETLAFSAR-CQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1426)
Q Consensus 242 TV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1426)
||+||+.++.. ... .. . .+ ..+....++.+++.+||.+..++.+
T Consensus 91 tv~e~l~~~~~~~~~----------~~------~-~~--------------~~~~~~~~~~~l~~~~l~~~~~~~~---- 135 (256)
T TIGR03873 91 TVRDVVALGRIPHRS----------LW------A-GD--------------SPHDAAVVDRALARTELSHLADRDM---- 135 (256)
T ss_pred CHHHHHHhcchhhhh----------hc------c-CC--------------CHHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 99999987531 000 00 0 00 0011224567889999987666554
Q ss_pred cccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000556 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1426)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~ 400 (1426)
..||||||||++||+|++.+|++++|||||+|||+.+...+.+.|+++.. . +++|+.++|+.+++.+++|+|++|++
T Consensus 136 -~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~ 212 (256)
T TIGR03873 136 -STLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-T-GVTVVAALHDLNLAASYCDHVVVLDG 212 (256)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998753 3 44566678888899999999999999
Q ss_pred CeEEEecChhhHH
Q 000556 401 GQIVYQGPRELVL 413 (1426)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1426)
|++++.|+.+++.
T Consensus 213 G~i~~~g~~~~~~ 225 (256)
T TIGR03873 213 GRVVAAGPPREVL 225 (256)
T ss_pred CCEEEecCHHHhh
Confidence 9999999987753
No 444
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-32 Score=313.65 Aligned_cols=216 Identities=21% Similarity=0.237 Sum_probs=175.4
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITIS 903 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~ 903 (1426)
..+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++
T Consensus 15 ~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~ 81 (265)
T PRK14252 15 QKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILH 81 (265)
T ss_pred ceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEc
Confidence 3589999998874 236999999999999999999999999999999999976421 258999999
Q ss_pred CccCC----c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccc
Q 000556 904 GYPKK----Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSL 972 (1426)
Q Consensus 904 g~~~~----~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~ 972 (1426)
|.+.. . ..+++.++|++|++.+++. |++||+.+...... .......++.++++++.+++.+ ..+..
T Consensus 82 g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 158 (265)
T PRK14252 82 PDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRG--VKRRSILEERVENALRNAALWDEVKDRLGDL 158 (265)
T ss_pred CccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcC--CChHHHHHHHHHHHHHHcCCchhhhHHHhCC
Confidence 87642 1 1345678999999988885 99999987643221 1111223456788888888753 22333
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEE
Q 000556 973 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELF 1052 (1426)
Q Consensus 973 vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ 1052 (1426)
...||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|+++
T Consensus 159 -----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~ 231 (265)
T PRK14252 159 -----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTA 231 (265)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999875 699999999986 5778999999
Q ss_pred EEecCcEEEEEcCC
Q 000556 1053 LMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1053 ll~~gg~~v~~G~~ 1066 (1426)
+|++ |+++..|+.
T Consensus 232 ~l~~-G~i~~~g~~ 244 (265)
T PRK14252 232 YMYM-GELIEFGAT 244 (265)
T ss_pred EEEC-CEEEEeCCH
Confidence 9985 789988875
No 445
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.1e-32 Score=305.94 Aligned_cols=199 Identities=21% Similarity=0.318 Sum_probs=164.9
Q ss_pred EeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-ccceEEEecCCCCCCCCCCHHH
Q 000556 167 ILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-PERTAAYISQHDNHIGEMTVRE 245 (1426)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 245 (1426)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 357999999999999999999999999999999999987 999999999875432 2457999999999999999999
Q ss_pred HHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccccCC
Q 000556 246 TLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGIS 325 (1426)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LS 325 (1426)
|+.+...... ... .+....++++++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~~-~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KLN---------------------------------AEQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhccC-Ccc---------------------------------HHHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 9987532100 000 001123567889999987666554 4799
Q ss_pred hhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEE
Q 000556 326 GGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1426)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~iv~ 405 (1426)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.+. .+++|+.++|+.+++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSE-RQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 99999999999999999999999999999999999999999988653 34555557888888889999999999999999
Q ss_pred ecC
Q 000556 406 QGP 408 (1426)
Q Consensus 406 ~G~ 408 (1426)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 875
No 446
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.2e-33 Score=364.15 Aligned_cols=212 Identities=26% Similarity=0.432 Sum_probs=179.5
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++|+||+|+|+. +++.+|+|+|++|+|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQP--TEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 46999999999852 124699999999999999999999999999999999998764 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 976 (1426)
+++ ..+++.++||+|++.+++ .|++||+.+.. + +.+ ++.++++++..++.+. .|+.+|..
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~----~-~~~----~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA----P-YAD----DEEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC----C-CCC----HHHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 764 356788999999999886 59999997641 1 222 2346778888877654 45666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.+|+|++|++
T Consensus 599 -G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~ 674 (694)
T TIGR03375 599 -GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN 674 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 46899999999999999999999999999999999999999999999886 4899999999985 5688999999985
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 675 -G~i~e~G~~ 683 (694)
T TIGR03375 675 -GRIVADGPK 683 (694)
T ss_pred -CEEEeeCCH
Confidence 799999974
No 447
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.6e-32 Score=312.10 Aligned_cols=219 Identities=26% Similarity=0.306 Sum_probs=170.7
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.++ .+.+|+|+|+.|++|++++|+|+||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 56788887763 23599999999999999999999999999999999997421135799999998764
Q ss_pred cc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHH-hc-C-C-CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000556 909 QE---T-FARISGYCEQNDIHSPFVTVYESLLYSAW-LR-L-P-PEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 979 (1426)
Q Consensus 909 ~~---~-~~~~~gyv~q~~~~~~~lTv~e~l~f~a~-lr-~-~-~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 979 (1426)
.. . .++.++|++|++.+++.+|+.+++.+... ++ . . ...+.....+++++.++.+++. +..+..+ .+
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 31 1 23468999999988888887776543211 11 0 0 0111223345678899999995 3444432 13
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhh-cceEEEEecCc
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDA-FDELFLMKRGG 1058 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~-fD~v~ll~~gg 1058 (1426)
.||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+... +|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999999877899999999986 34454 799999985 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 89998875
No 448
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.7e-33 Score=277.12 Aligned_cols=202 Identities=29% Similarity=0.389 Sum_probs=171.5
Q ss_pred CCcccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc-------cceEEEec
Q 000556 160 SRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYIS 232 (1426)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~ 232 (1426)
......+||++|++.|++||.++|+|||||||||||-+|+|+-.|+ +|+|.+-|+++..+.. .+.+|+|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 3345688999999999999999999999999999999999999998 9999999999876543 26799999
Q ss_pred CCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccc
Q 000556 233 QHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCA 312 (1426)
Q Consensus 233 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1426)
|.-.++|+||-.||+...+.++|...+ +....+...|+.+||.+..
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~----------------------------------~~~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSA----------------------------------DSRAGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCccc----------------------------------cHHHHHHHHHHHhCccccc
Confidence 999999999999999988877653211 0122355678999999766
Q ss_pred cccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhc
Q 000556 313 DTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLF 392 (1426)
Q Consensus 313 dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~f 392 (1426)
+- ++.+|||||+|||+||||+...|+|||-||||-+||..|..+|.+.|-.+.+. .++++|.++|+ +....-|
T Consensus 141 ~H-----yP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre-~G~TlVlVTHD-~~LA~Rc 213 (228)
T COG4181 141 TH-----YPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRE-RGTTLVLVTHD-PQLAARC 213 (228)
T ss_pred cc-----CccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhh-cCceEEEEeCC-HHHHHhh
Confidence 53 45589999999999999999999999999999999999999999999888764 56666667776 4567789
Q ss_pred CeEEEecCCeEEE
Q 000556 393 DDIILLSDGQIVY 405 (1426)
Q Consensus 393 D~vilL~~G~iv~ 405 (1426)
||++-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999874
No 449
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=5.5e-33 Score=308.62 Aligned_cols=195 Identities=22% Similarity=0.368 Sum_probs=161.6
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCC--C---ccceEEEecCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF--V---PERTAAYISQHDNHIG 239 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~~~~ 239 (1426)
..+|+|+|+.++||++++|+|||||||||||++|+|.++|+ +|+|.++|+++... . .++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 45999999999999999999999999999999999999987 99999999887421 1 1357999999998898
Q ss_pred CCCHHHHHHHhhh-hcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 240 EMTVRETLAFSAR-CQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 240 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
.+||+||+.++.. .++... .+....++.+++.+||++..++.+
T Consensus 90 ~~t~~e~l~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 133 (213)
T cd03262 90 HLTVLENITLAPIKVKGMSK----------------------------------AEAEERALELLEKVGLADKADAYP-- 133 (213)
T ss_pred CCcHHHHHHhHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhhCc--
Confidence 9999999988642 111000 011223567788999987666554
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
+.||||||||++||++++.+|++++|||||+|||+.+...+.+.|+++.+ .+ ++|+.++|+..++.+++|+|++|
T Consensus 134 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~sh~~~~~~~~~d~i~~l 208 (213)
T cd03262 134 ---AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EG-MTMVVVTHEMGFAREVADRVIFM 208 (213)
T ss_pred ---cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 47999999999999999999999999999999999999999999999864 34 44555788888999999999999
Q ss_pred cCCeE
Q 000556 399 SDGQI 403 (1426)
Q Consensus 399 ~~G~i 403 (1426)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 450
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-32 Score=306.26 Aligned_cols=192 Identities=27% Similarity=0.394 Sum_probs=160.0
Q ss_pred cceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-------ccceEEEecCCCCCCCCCC
Q 000556 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1426)
|+|+++++ |+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999987 999999998764211 1357999999998888999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
++||+.+..... .. . .....++.+++.+||++..++.+ +
T Consensus 92 ~~~~l~~~~~~~---~~--------~-------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (214)
T cd03297 92 VRENLAFGLKRK---RN--------R-------------------------EDRISVDELLDLLGLDHLLNRYP-----A 130 (214)
T ss_pred HHHHHHHHHhhC---CH--------H-------------------------HHHHHHHHHHHHcCCHhHhhcCc-----c
Confidence 999998764211 00 0 01123566789999987666544 4
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
.||||||||++||++++.+|++++|||||+|||+.+...+.+.|++++... +++|+.++|+.+++.+++|++++|++|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 131 QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNL-NIPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 799999999999999999999999999999999999999999999986533 4455557888888999999999999999
Q ss_pred EEEec
Q 000556 403 IVYQG 407 (1426)
Q Consensus 403 iv~~G 407 (1426)
++.+|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98876
No 451
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-32 Score=312.51 Aligned_cols=211 Identities=18% Similarity=0.301 Sum_probs=165.4
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCC-----CccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1426)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++ |....+|+|+++|+++... ..++.++|++|++.+
T Consensus 25 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 104 (259)
T PRK14274 25 HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNP 104 (259)
T ss_pred eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCcc
Confidence 358999999999999999999999999999999999986 3212389999999987431 113569999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++. ||+||+.|.....+.... .+....++.+++.+|+.+......
T Consensus 105 ~~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l- 149 (259)
T PRK14274 105 FPQ-SIFDNVAYGPRIHGTKNK---------------------------------KKLQEIVEKSLKDVALWDEVKDRL- 149 (259)
T ss_pred ccc-CHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhhh-
Confidence 875 999999886433211000 001123456778888753211111
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+..+++||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. +. +++.++|+.+++.+++|+|++
T Consensus 150 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~-tiiivtH~~~~~~~~~d~i~~ 226 (259)
T PRK14274 150 HTQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE--KY-TIVIVTHNMQQAARVSDQTAF 226 (259)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--CC-EEEEEEcCHHHHHHhCCEEEE
Confidence 234557999999999999999999999999999999999999999999998742 44 455577778889999999999
Q ss_pred ecCCeEEEecChhhHH
Q 000556 398 LSDGQIVYQGPRELVL 413 (1426)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1426)
|++|+++.+|+++++.
T Consensus 227 l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 227 FYMGELVECNDTNKMF 242 (259)
T ss_pred EECCEEEEECCHHHHh
Confidence 9999999999998764
No 452
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.7e-33 Score=362.65 Aligned_cols=211 Identities=26% Similarity=0.402 Sum_probs=175.7
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++|+||+|+|+.. +++.+|+|+|++|+|||++||+||||||||||+++|+|..++ .+|+|.+||.|
T Consensus 477 ~~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 544 (711)
T TIGR00958 477 GLIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQP--TGGQVLLDGVP 544 (711)
T ss_pred CeEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEE
Confidence 469999999998631 124699999999999999999999999999999999998764 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 976 (1426)
+++ ..+++.++||+|++.++. .|++||+.++. + +.+ ++.++++++..++.+. .|+.+|..
T Consensus 545 i~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~----~-~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~ 614 (711)
T TIGR00958 545 LVQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL----T-DTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGEK 614 (711)
T ss_pred HHhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC----C-CCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccCC
Confidence 754 346778999999998886 69999998742 1 222 3347788888887654 45666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
..+||||||||++|||||+++|+||+||||||+||+.++..+++ .. ..+++|+|+++|+++ ..+.+|+|++|++
T Consensus 615 -G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~~ 688 (711)
T TIGR00958 615 -GSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLKK 688 (711)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEEC
Confidence 46899999999999999999999999999999999999999998 22 235899999999985 5678999999985
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 689 -G~ive~Gt~ 697 (711)
T TIGR00958 689 -GSVVEMGTH 697 (711)
T ss_pred -CEEEEeeCH
Confidence 799999874
No 453
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.5e-33 Score=362.39 Aligned_cols=206 Identities=23% Similarity=0.318 Sum_probs=164.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
+++|+|+|++|+|||.++|+||||||||||+|+|+|.++|+ +|+|.+||.++.+... ++.++||+|++.+|. .
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLFE-G 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhhh-c
Confidence 45899999999999999999999999999999999999998 9999999999877654 578999999987665 6
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
|++|||.++.. +.+.+...+++...+ .++.+ -.+++..||.+|+.+
T Consensus 568 Ti~eNi~l~~~-------------------------~~~~~~i~~al~~~~------l~~~i--~~lp~gl~t~i~e~G- 613 (710)
T TIGR03796 568 TVRDNLTLWDP-------------------------TIPDADLVRACKDAA------IHDVI--TSRPGGYDAELAEGG- 613 (710)
T ss_pred cHHHHhhCCCC-------------------------CCCHHHHHHHHHHhC------CHHHH--HhCcCcccceeccCC-
Confidence 99999987521 001111111111000 11112 235667899999765
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
.+||||||||++||||++++|++++||||||+||+.+...|.+.|++ .++|+|+ ++|.. ++...+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHrl-~~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHRL-STIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecCH-HHHHhCCEEEEEeCC
Confidence 57999999999999999999999999999999999999999999975 2456665 55554 456679999999999
Q ss_pred eEEEecChhhHHH
Q 000556 402 QIVYQGPRELVLE 414 (1426)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1426)
+++++|+++++++
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 454
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-33 Score=315.88 Aligned_cols=209 Identities=25% Similarity=0.341 Sum_probs=163.3
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
+++|+++.++. .+..+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~ 68 (234)
T cd03251 2 EFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDV--DSGRILIDGHDVRD 68 (234)
T ss_pred EEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccC--CCCEEEECCEEhhh
Confidence 56777776631 113589999999999999999999999999999999998763 48999999976542
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHH-----HHHHHHHHHc--CCcccccccccCCCCC
Q 000556 910 ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRK-----MFIEEVMELV--ELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 910 ---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~vg~~~~~ 979 (1426)
...++.++|++|++.+++ .||+||+.+.... ....... ..+++.++.+ ++.+..+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~ 137 (234)
T cd03251 69 YTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GV 137 (234)
T ss_pred CCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CC
Confidence 234567899999988776 6999999764321 1111111 1233444444 444444433 46
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.||+|||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ |+|||+++|++. ++ ..+|++++|++ |+
T Consensus 138 ~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~-~~~d~v~~l~~-G~ 213 (234)
T cd03251 138 KLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLMK-NRTTFVIAHRLS-TI-ENADRIVVLED-GK 213 (234)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEecCHH-HH-hhCCEEEEecC-Ce
Confidence 8999999999999999999999999999999999999999999999864 899999999986 45 45999999986 68
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
++..|+.
T Consensus 214 i~~~~~~ 220 (234)
T cd03251 214 IVERGTH 220 (234)
T ss_pred EeeeCCH
Confidence 8887764
No 455
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.7e-33 Score=294.62 Aligned_cols=212 Identities=22% Similarity=0.345 Sum_probs=186.3
Q ss_pred CCcccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCC
Q 000556 160 SRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIG 239 (1426)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~ 239 (1426)
++-.++++++|+|+.++||+|++++|||||||||.+++|.|.++|+ +|+|+++|.+++... ...|||.|.+..+++
T Consensus 10 K~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~ 85 (300)
T COG4152 10 KSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEERGLYP 85 (300)
T ss_pred hccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhhccCc
Confidence 3445688999999999999999999999999999999999999998 999999999886543 346999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000556 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1426)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1426)
.+||.|.|.|-++++|+... +.....+..|+.+++.......
T Consensus 86 k~tv~dql~yla~LkGm~~~----------------------------------e~~~~~~~wLer~~i~~~~~~k---- 127 (300)
T COG4152 86 KMTVEDQLKYLAELKGMPKA----------------------------------EIQKKLQAWLERLEIVGKKTKK---- 127 (300)
T ss_pred cCcHHHHHHHHHHhcCCcHH----------------------------------HHHHHHHHHHHhccccccccch----
Confidence 99999999999999886421 2234567889999998776644
Q ss_pred ccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000556 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1426)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~ 399 (1426)
+..||-|.+|++-+-.+++++|++++||||+|||||.++..+-+.+.++.. .+++|+..+|.++.+.++||+|++|+
T Consensus 128 -Ik~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~--~GatIifSsH~Me~vEeLCD~llmL~ 204 (300)
T COG4152 128 -IKELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKE--EGATIIFSSHRMEHVEELCDRLLMLK 204 (300)
T ss_pred -HHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHh--cCCEEEEecchHHHHHHHhhhhheec
Confidence 457999999999999999999999999999999999999999999998864 45666667889999999999999999
Q ss_pred CCeEEEecChhhHHHHH
Q 000556 400 DGQIVYQGPRELVLEFF 416 (1426)
Q Consensus 400 ~G~iv~~G~~~~~~~~F 416 (1426)
+|+.|.+|+.+++..-|
T Consensus 205 kG~~V~~G~v~~ir~~~ 221 (300)
T COG4152 205 KGQTVLYGTVEDIRRSF 221 (300)
T ss_pred CCceEEeccHHHHHHhc
Confidence 99999999999998744
No 456
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=313.26 Aligned_cols=210 Identities=18% Similarity=0.275 Sum_probs=166.3
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcC---CCCCCCceeEEEEcCccCCCCC-----ccceEEEecCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGK---LDSSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDN 236 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~---~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~ 236 (1426)
+++|+|+|+.+++|++++|+||||||||||+++|+|. .++. ..+|+|.++|+++.... .++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 4589999999999999999999999999999999997 3331 13899999999875421 1356999999987
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1426)
.++ .||+||+.++.+..+.... ......++++++.+||.+...+..
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 140 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKDN---------------------------------AFIRQRVEETLKGAALWDEVKDKL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCcchhhhh
Confidence 776 6999999886543211000 001123567788899865322222
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
+..++.||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++. .+ ++|+.++|+..++.+++|+|+
T Consensus 141 -~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~v~ 216 (250)
T PRK14245 141 -KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--KD-YTIVIVTHNMQQAARVSDKTA 216 (250)
T ss_pred -hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhCCEEE
Confidence 23456799999999999999999999999999999999999999999999874 24 445557788888999999999
Q ss_pred EecCCeEEEecChhhHH
Q 000556 397 LLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1426)
+|++|++++.|+.+++.
T Consensus 217 ~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 217 FFYMGEMVEYDDTKKIF 233 (250)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999998874
No 457
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-32 Score=314.29 Aligned_cols=212 Identities=21% Similarity=0.333 Sum_probs=166.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCC-----CccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1426)
..+|+|+|++|++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++..
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (258)
T PRK14241 17 FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNP 96 (258)
T ss_pred EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEcccccc
Confidence 358999999999999999999999999999999999986410 1389999999876421 123579999999989
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++.+||+||+.++....+.... .+....++.+++.+||........
T Consensus 97 ~~~~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 142 (258)
T PRK14241 97 FPTMSIRDNVVAGLKLNGVRNK---------------------------------KDLDELVEKSLRGANLWNEVKDRL- 142 (258)
T ss_pred CCCCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-
Confidence 9999999999886543211000 001224566788888842111111
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+..+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +. +||.++|+..++.+++|+|++
T Consensus 143 ~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~-tviivsH~~~~~~~~~d~i~~ 219 (258)
T PRK14241 143 DKPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--DY-TIVIVTHNMQQAARVSDQTAF 219 (258)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CC-EEEEEecCHHHHHHhCCEEEE
Confidence 234557999999999999999999999999999999999999999999998853 34 555577888889999999999
Q ss_pred ec------CCeEEEecChhhHH
Q 000556 398 LS------DGQIVYQGPRELVL 413 (1426)
Q Consensus 398 L~------~G~iv~~G~~~~~~ 413 (1426)
|+ +|++++.|+.+++.
T Consensus 220 l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 220 FNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EecccCCCCceEEecCCHHHHH
Confidence 96 79999999988764
No 458
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.8e-33 Score=325.99 Aligned_cols=202 Identities=27% Similarity=0.403 Sum_probs=165.5
Q ss_pred cceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCC
Q 000556 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGE 240 (1426)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1426)
+.++|+|+|+++++||.+||+|++|||||||++.|+|-++|+ +|+|+.||.++..... ++.++.++|.. |+..
T Consensus 350 ~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~-hlF~ 425 (573)
T COG4987 350 QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRV-HLFS 425 (573)
T ss_pred ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccch-HHHH
Confidence 346999999999999999999999999999999999999998 9999999999877665 46789999975 6666
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhC-------Cccccc
Q 000556 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-------LEVCAD 313 (1426)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-------L~~~~d 313 (1426)
.|+|+||..+... ...++. -.+++..| .++..|
T Consensus 426 ~Tlr~NL~lA~~~-------------------------AsDEel---------------~~aL~qvgL~~l~~~~p~gl~ 465 (573)
T COG4987 426 GTLRDNLRLANPD-------------------------ASDEEL---------------WAALQQVGLEKLLESAPDGLN 465 (573)
T ss_pred HHHHHHHhhcCCC-------------------------CCHHHH---------------HHHHHHcCHHHHHHhChhhhh
Confidence 7999999986421 111111 11223333 345678
Q ss_pred ccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcC
Q 000556 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1426)
Q Consensus 314 t~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD 393 (1426)
|.+|+.+ +.||||||||++|||+|++++++++|||||.|||+.|..+++..|.+.+ .++|+++ ++|+... .+.||
T Consensus 466 t~lge~G-~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~--~~kTll~-vTHrL~~-le~~d 540 (573)
T COG4987 466 TWLGEGG-RRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA--EGKTLLM-VTHRLRG-LERMD 540 (573)
T ss_pred chhccCC-CcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh--cCCeEEE-Eeccccc-HhhcC
Confidence 8999765 5799999999999999999999999999999999999999999998754 3556555 5666544 46789
Q ss_pred eEEEecCCeEEEecChhhHHH
Q 000556 394 DIILLSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~~ 414 (1426)
+|++|++|+++++|.+.+++.
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEEECCeeeecCCHHhhhc
Confidence 999999999999999998864
No 459
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-32 Score=315.42 Aligned_cols=212 Identities=21% Similarity=0.319 Sum_probs=166.6
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCC-----CccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1426)
..+|+|+|+.|+||++++|+|||||||||||++|+|.++|. ...+|+|+++|+++... ..++.++|++|++..
T Consensus 32 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 111 (267)
T PRK14235 32 KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNP 111 (267)
T ss_pred EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCC
Confidence 35899999999999999999999999999999999998741 01289999999887532 123578999999877
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++. ||+||+.++...++.... + .+....++.+++.+||.+......
T Consensus 112 ~~~-tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 157 (267)
T PRK14235 112 FPK-SIYENVAYGPRIHGLARS--------K------------------------AELDEIVETSLRKAGLWEEVKDRL- 157 (267)
T ss_pred CCC-cHHHHHHHHHHhcccccc--------h------------------------HHHHHHHHHHHHHcCCchhhhHHh-
Confidence 774 999999987543221000 0 001123566788889864211111
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+..++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+ +. +|+.++|+.+++.+++|++++
T Consensus 158 ~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~~-tiiivtH~~~~~~~~~d~v~~ 234 (267)
T PRK14235 158 HEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--NY-TIVIVTHSMQQAARVSQRTAF 234 (267)
T ss_pred hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--CC-eEEEEEcCHHHHHhhCCEEEE
Confidence 234557999999999999999999999999999999999999999999998753 34 555577888888899999999
Q ss_pred ecCCeEEEecChhhHH
Q 000556 398 LSDGQIVYQGPRELVL 413 (1426)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1426)
|++|+++.+|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 235 FHLGNLVEVGDTEKMF 250 (267)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988763
No 460
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-32 Score=312.20 Aligned_cols=211 Identities=20% Similarity=0.315 Sum_probs=166.0
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCCC-----ccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFV-----PERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1426)
+.+|+|+|++|++||+++|+|||||||||||++|+|..+|. ...+|+|.++|.++.... .++.++|++|++..
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35899999999999999999999999999999999998641 113899999999875321 13569999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++ +|++||+.|.....+.... .+....++.+++.+||.+......
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 141 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDDL- 141 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-
Confidence 77 8999999986543221000 001123456778888742110111
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+..++.||||||||++||++++.+|++++|||||+|||+.++.++.+.|+++.. +. +|+.++|+..++.+++|+|++
T Consensus 142 ~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~-tiiivsH~~~~~~~~~d~v~~ 218 (251)
T PRK14270 142 KKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--EY-TIVIVTHNMQQASRVSDYTAF 218 (251)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CC-eEEEEEcCHHHHHHhcCEEEE
Confidence 234567999999999999999999999999999999999999999999998753 34 455567778889999999999
Q ss_pred ecCCeEEEecChhhHH
Q 000556 398 LSDGQIVYQGPRELVL 413 (1426)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1426)
|++|++++.|+.+++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 219 FLMGDLIEFNKTEKIF 234 (251)
T ss_pred EECCeEEEeCCHHHHh
Confidence 9999999999998764
No 461
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.8e-32 Score=313.44 Aligned_cols=207 Identities=24% Similarity=0.350 Sum_probs=167.6
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCcc-----CCCCCc-------cceEEEec
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHD-----MGEFVP-------ERTAAYIS 232 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~ 232 (1426)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~ 95 (258)
T PRK11701 19 RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVH 95 (258)
T ss_pred ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEe
Confidence 35899999999999999999999999999999999999987 9999999987 554322 23589999
Q ss_pred CCCC--CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcc
Q 000556 233 QHDN--HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV 310 (1426)
Q Consensus 233 Q~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 310 (1426)
|++. +.+.+|+.||+.+.....+... + .+....++++++.+|+.+
T Consensus 96 q~~~~~~~~~~~~~~~i~~~~~~~~~~~-~--------------------------------~~~~~~~~~~l~~~~l~~ 142 (258)
T PRK11701 96 QHPRDGLRMQVSAGGNIGERLMAVGARH-Y--------------------------------GDIRATAGDWLERVEIDA 142 (258)
T ss_pred eCcccccCccccHHHHHHHHHHHhccCc-H--------------------------------HHHHHHHHHHHHHcCCCh
Confidence 9873 5777899999976432110000 0 001223567889999974
Q ss_pred -cccccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHH
Q 000556 311 -CADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETY 389 (1426)
Q Consensus 311 -~~dt~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~ 389 (1426)
..++. +..|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++.+. .+.+|+.++|+..++.
T Consensus 143 ~~~~~~-----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~isH~~~~~~ 216 (258)
T PRK11701 143 ARIDDL-----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRE-LGLAVVIVTHDLAVAR 216 (258)
T ss_pred hHHhCC-----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHH
Confidence 44543 4579999999999999999999999999999999999999999999987653 2455666888888999
Q ss_pred hhcCeEEEecCCeEEEecChhhHH
Q 000556 390 DLFDDIILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 390 ~~fD~vilL~~G~iv~~G~~~~~~ 413 (1426)
+.+|+|++|++|++++.|+++++.
T Consensus 217 ~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 217 LLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999988764
No 462
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=6.1e-33 Score=309.82 Aligned_cols=209 Identities=25% Similarity=0.400 Sum_probs=168.4
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.+.. ..+.+|+|+|+++++|++++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKP--TSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCeEEECCEEhH
Confidence 677888876631 124599999999999999999999999999999999998653 4799999998753
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc------CCCCC
Q 000556 909 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVG------LPGVS 979 (1426)
Q Consensus 909 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg------~~~~~ 979 (1426)
. ...++.++|++|++..++ .|+.|++.+... ... .+.+.++++.+++.+..+..+. .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 223457899999988776 699999976321 111 2236678888899877766431 11245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|++. . .+.+|++++|++ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~-~~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS-L-LDLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH-H-HHhCCEEEEEeC-Ce
Confidence 89999999999999999999999999999999999999999999998764 89999999986 3 479999999986 67
Q ss_pred EEEEc
Q 000556 1060 EIYVG 1064 (1426)
Q Consensus 1060 ~v~~G 1064 (1426)
+++.|
T Consensus 216 i~~~~ 220 (220)
T cd03245 216 IVADG 220 (220)
T ss_pred EeecC
Confidence 77654
No 463
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3e-33 Score=316.13 Aligned_cols=210 Identities=29% Similarity=0.419 Sum_probs=162.4
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
+++|+++.++.. +++.+|+|+||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~~~----------~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 69 (238)
T cd03249 2 EFKNVSFRYPSR----------PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRD 69 (238)
T ss_pred eEEEEEEecCCC----------CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhh
Confidence 567777665310 12359999999999999999999999999999999999865 348999999987542
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc-------ccCCCCC
Q 000556 910 ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSL-------VGLPGVS 979 (1426)
Q Consensus 910 ---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~-------vg~~~~~ 979 (1426)
...++.++|++|++.+++ .||+|++.+....+ ..+ .+++.++..++.+..+.+ .. ..+.
T Consensus 70 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~ 138 (238)
T cd03249 70 LNLRWLRSQIGLVSQEPVLFD-GTIAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGS 138 (238)
T ss_pred cCHHHHHhhEEEECCchhhhh-hhHHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceeec-cCCc
Confidence 223456999999988776 69999997642211 111 123334444443322211 11 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|++. ++ +.+|++++|++ |+
T Consensus 139 ~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~ 214 (238)
T cd03249 139 QLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQ 214 (238)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999987 7999999999986 35 48999999986 78
Q ss_pred EEEEcCC
Q 000556 1060 EIYVGPL 1066 (1426)
Q Consensus 1060 ~v~~G~~ 1066 (1426)
+++.|+.
T Consensus 215 i~~~~~~ 221 (238)
T cd03249 215 VVEQGTH 221 (238)
T ss_pred EEEeCCH
Confidence 8888874
No 464
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=8.7e-33 Score=358.59 Aligned_cols=208 Identities=28% Similarity=0.469 Sum_probs=167.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
.++|+|+|++|+|||.++|+||||||||||+|+|+|.++|+ +|+|.+||.++.+... ++.++||+|++.+|. .
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-G 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-h
Confidence 35899999999999999999999999999999999999998 9999999999887654 478999999987665 6
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
|++|||.++.. +.+.++..+++...+ .++.++ .|++..||.+|+.+
T Consensus 554 TI~eNi~~~~~-------------------------~~~~~~i~~a~~~~~------l~~~i~--~lp~gl~T~i~e~G- 599 (694)
T TIGR03375 554 TLRDNIALGAP-------------------------YADDEEILRAAELAG------VTEFVR--RHPDGLDMQIGERG- 599 (694)
T ss_pred hHHHHHhCCCC-------------------------CCCHHHHHHHHHHcC------hHHHHH--hCcccccceecCCC-
Confidence 99999988532 011111111111100 111122 46778899999875
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
..||||||||++||||++++|++++||||||+||+.+...|.+.|+++. .++|+|+ ++|.. ++.+.+|+|++|++|
T Consensus 600 ~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~--~~~T~ii-ItHrl-~~~~~~D~iivl~~G 675 (694)
T TIGR03375 600 RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL--AGKTLVL-VTHRT-SLLDLVDRIIVMDNG 675 (694)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCCEEEE-EecCH-HHHHhCCEEEEEeCC
Confidence 4799999999999999999999999999999999999999999998864 3456666 45544 456889999999999
Q ss_pred eEEEecChhhHHH
Q 000556 402 QIVYQGPRELVLE 414 (1426)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1426)
+++++|+++++++
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999999865
No 465
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-32 Score=309.80 Aligned_cols=219 Identities=20% Similarity=0.266 Sum_probs=174.9
Q ss_pred ceeEEeceeeEEecch----hhhhc--cc-ccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEE
Q 000556 827 HSLTFDEVVYSVDMPQ----EMKLQ--GV-LEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGN 899 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~----~~~~~--~~-~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~ 899 (1426)
+.+..+|++..++... .++.. +. ....+.+|+|+|++++|||++||+||||||||||+++|+|..++ .+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p--~~G~ 80 (264)
T PRK13546 3 VSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSP--TVGK 80 (264)
T ss_pred ceEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceE
Confidence 3567777764444311 11111 11 22456799999999999999999999999999999999998763 4799
Q ss_pred EEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000556 900 ITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 979 (1426)
Q Consensus 900 i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 979 (1426)
|.++|. .+++.|+....+.+|+.||+.+..... ....+...+.++++++.+++.+..+.. +.
T Consensus 81 I~~~g~----------~~~~~~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~ 142 (264)
T PRK13546 81 VDRNGE----------VSVIAISAGLSGQLTGIENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQP-----VK 142 (264)
T ss_pred EEECCE----------EeEEecccCCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----cc
Confidence 999984 356677776777899999998754432 123344445677889999998877765 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcE
Q 000556 980 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1059 (1426)
Q Consensus 980 ~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~ 1059 (1426)
.||+|||||++||++|+.+|+||+|||||+|||+.+...+.+.|+++.+.|+|||+++|++. ++.+.+|++++|++ |+
T Consensus 143 ~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~ 220 (264)
T PRK13546 143 KYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GK 220 (264)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999777999999999986 57788999999985 78
Q ss_pred EEEEcCCC
Q 000556 1060 EIYVGPLG 1067 (1426)
Q Consensus 1060 ~v~~G~~~ 1067 (1426)
++..|+.+
T Consensus 221 i~~~g~~~ 228 (264)
T PRK13546 221 LKDYGELD 228 (264)
T ss_pred EEEeCCHH
Confidence 98888753
No 466
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-33 Score=302.12 Aligned_cols=196 Identities=27% Similarity=0.391 Sum_probs=170.4
Q ss_pred cceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC-------ccceEEEecCCCCCCCCCC
Q 000556 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1426)
++++..+.-.+|||-|+||||||||+|+|+|+..|+ +|.|.+||+.+.+.. .+|.+|||+|+..+||.+|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 577887775799999999999999999999999999 999999998764321 2588999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
|+-||.|+.... ....-|.+.+.||++|..+.+ +.
T Consensus 93 VrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~-----P~ 127 (352)
T COG4148 93 VRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRY-----PG 127 (352)
T ss_pred Eecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhC-----CC
Confidence 999999986421 001246788999999988754 55
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
.|||||||||+|||||++.|++|+||||.+.||-....+|+-.|.++.+. -+.=|+.++|...|+.+++|+|++|++|+
T Consensus 128 ~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e-~~IPIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 128 TLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDE-INIPILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred ccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHh-cCCCEEEEecCHHHHHhhhheEEEecCCe
Confidence 79999999999999999999999999999999999999999999998764 45667778999999999999999999999
Q ss_pred EEEecChhhHHH
Q 000556 403 IVYQGPRELVLE 414 (1426)
Q Consensus 403 iv~~G~~~~~~~ 414 (1426)
+...|+.+++..
T Consensus 207 V~A~g~~e~v~~ 218 (352)
T COG4148 207 VKASGPLEEVWG 218 (352)
T ss_pred EEecCcHHHHhc
Confidence 999999998753
No 467
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-33 Score=314.05 Aligned_cols=211 Identities=25% Similarity=0.379 Sum_probs=167.3
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.++++|+++.++. .+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYDE------------KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDP--QKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecCC------------CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEeH
Confidence 4778888887631 23589999999999999999999999999999999998753 479999999865
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc-c-----CCCC
Q 000556 908 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLV-G-----LPGV 978 (1426)
Q Consensus 908 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~v-g-----~~~~ 978 (1426)
.. ..+++.++|++|++.+++. |++|++.+... ... ...+++.++.+++.+..+.+. | ...+
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NAT----DEEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCC----HHHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 42 2345678999999887775 99999976421 111 123455566666655443321 1 1124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCc
Q 000556 979 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1058 (1426)
Q Consensus 979 ~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg 1058 (1426)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|++. ++ +.+|++++|++ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-C
Confidence 6899999999999999999999999999999999999999999999986 5899999999986 34 56999999985 7
Q ss_pred EEEEEcCC
Q 000556 1059 QEIYVGPL 1066 (1426)
Q Consensus 1059 ~~v~~G~~ 1066 (1426)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 88887764
No 468
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.7e-33 Score=324.29 Aligned_cols=232 Identities=27% Similarity=0.412 Sum_probs=192.9
Q ss_pred CCccccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEE
Q 000556 818 RGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYIT 897 (1426)
Q Consensus 818 ~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~ 897 (1426)
..|.+|.....+..+++++.. +. .++++|+||||.+.+||.+||+||||||||||.++|.|.-. +..
T Consensus 324 ~~m~LP~P~g~L~Ve~l~~~P---Pg--------~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~--p~~ 390 (580)
T COG4618 324 ERMPLPAPQGALSVERLTAAP---PG--------QKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWP--PTS 390 (580)
T ss_pred CCCCCCCCCceeeEeeeeecC---CC--------CCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccc--cCC
Confidence 457788888899999999843 21 34689999999999999999999999999999999999765 358
Q ss_pred EEEEEcCccCCcc---cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHH-----HHHHHHHHHHHcCCcccc
Q 000556 898 GNITISGYPKKQE---TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSET-----RKMFIEEVMELVELKPLI 969 (1426)
Q Consensus 898 G~i~i~g~~~~~~---~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~-----~~~~v~~~l~~l~L~~~~ 969 (1426)
|.|++||.+.++. .+-+.+||.||+-.+++ -||.||+. |...+.+.+. +...|+|++ +.+.+-.
T Consensus 391 G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa-----Rf~~~~d~~kIieAA~lAgvHelI--l~lP~GY 462 (580)
T COG4618 391 GSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA-----RFGEEADPEKVIEAARLAGVHELI--LRLPQGY 462 (580)
T ss_pred CcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH-----hccccCCHHHHHHHHHHcChHHHH--HhCcCCc
Confidence 9999999988763 46678999999999887 59999994 2333333332 222234443 5677788
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcc
Q 000556 970 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFD 1049 (1426)
Q Consensus 970 ~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD 1049 (1426)
||.+|..| ..||||||||+.+||||-.+|.+++||||-|+||......+.+.|..+.++|+|+|+++|+|+ +...+|
T Consensus 463 dT~iG~~G-~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs--~L~~~D 539 (580)
T COG4618 463 DTRIGEGG-ATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPS--ALASVD 539 (580)
T ss_pred cCccCCCC-CCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHH--HHhhcc
Confidence 99999754 689999999999999999999999999999999999999999999999999999999999996 678999
Q ss_pred eEEEEecCcEEEEEcCCCcchhHHHHHHH
Q 000556 1050 ELFLMKRGGQEIYVGPLGRHSCQLISYFE 1078 (1426)
Q Consensus 1050 ~v~ll~~gg~~v~~G~~~~~~~~~~~yf~ 1078 (1426)
+|++|+ +|++--|||. ++++.-..
T Consensus 540 kilvl~-~G~~~~FG~r----~eVLa~~~ 563 (580)
T COG4618 540 KILVLQ-DGRIAAFGPR----EEVLAKVL 563 (580)
T ss_pred eeeeec-CChHHhcCCH----HHHHHHhc
Confidence 999998 5899999997 35555443
No 469
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-33 Score=317.32 Aligned_cols=253 Identities=23% Similarity=0.389 Sum_probs=195.8
Q ss_pred HhhhcccccHHHHHHHHHHHHhhc------CCCCCccEEEEeceEEEEEEecCCCCCCChhHHHHHHHHHHHhhhccCCC
Q 000556 87 KLVKVTEVDNEKFLLKLKSRIDRV------GIDLPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPS 160 (1426)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~p~v~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~ 160 (1426)
|.++..=-|.|+.++-+++.-+-+ ....++=.+.|+|++..-+
T Consensus 500 R~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~~~G~i~fsnvtF~Y~------------------------------- 548 (790)
T KOG0056|consen 500 RSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKVTQGKIEFSNVTFAYD------------------------------- 548 (790)
T ss_pred HHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccccCCeEEEEEeEEecC-------------------------------
Confidence 334444457777777776544422 2223444688888876532
Q ss_pred CcccceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCC---ccceEEEecCCCCC
Q 000556 161 RKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV---PERTAAYISQHDNH 237 (1426)
Q Consensus 161 ~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~ 237 (1426)
..+++|+||||++.||+.+|++||||+||||+|++|-...+.+ +|.|+++|+++.... .++.||.||||..+
T Consensus 549 --p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvL 623 (790)
T KOG0056|consen 549 --PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVL 623 (790)
T ss_pred --CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCccee
Confidence 2357999999999999999999999999999999999999987 999999999986543 35789999998777
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
|. .|+..||.|+..-. .+.+.+ +++...+ +. =+++++++.++|+||
T Consensus 624 FN-dTI~yNIryak~~A------------------------sneevy--aAAkAA~----IH---drIl~fPegY~t~VG 669 (790)
T KOG0056|consen 624 FN-DTILYNIRYAKPSA------------------------SNEEVY--AAAKAAQ----IH---DRILQFPEGYNTRVG 669 (790)
T ss_pred ec-ceeeeheeecCCCC------------------------ChHHHH--HHHHHhh----HH---HHHhcCchhhhhhhh
Confidence 65 59999998863211 111111 1111111 11 257899999999999
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+++.+ |||||||||+|||+++..|.+++|||.||+||..+.++|..+|.+++. ++|+|+..|. . .+.-.+|.|++
T Consensus 670 ERGLk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvAHR-L-STivnAD~ILv 744 (790)
T KOG0056|consen 670 ERGLK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVAHR-L-STIVNADLILV 744 (790)
T ss_pred hcccc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEeee-e-hheecccEEEE
Confidence 99996 999999999999999999999999999999999999999999999874 5677764443 3 34556899999
Q ss_pred ecCCeEEEecChhhHHH
Q 000556 398 LSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 398 L~~G~iv~~G~~~~~~~ 414 (1426)
+++|+|++.|.++|++.
T Consensus 745 i~~G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 745 ISNGRIVERGRHEELLK 761 (790)
T ss_pred EeCCeEeecCcHHHHHh
Confidence 99999999999999875
No 470
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.2e-33 Score=298.47 Aligned_cols=170 Identities=28% Similarity=0.412 Sum_probs=149.1
Q ss_pred EEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000556 830 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 909 (1426)
Q Consensus 830 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 909 (1426)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (178)
T cd03229 2 ELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTD 66 (178)
T ss_pred EEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5677776653 2469999999999999999999999999999999999865 348999999987543
Q ss_pred -----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000556 910 -----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 984 (1426)
Q Consensus 910 -----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 984 (1426)
...++.++|++|++..++..|++|++.+. ||+|
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G 104 (178)
T cd03229 67 LEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSGG 104 (178)
T ss_pred cchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCHH
Confidence 23456799999999888889999987531 8999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 985 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 985 qrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++|
T Consensus 105 ~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 105 QQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 999999999999999999999999999999999999999999887 899999999986 566789999999864
No 471
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=8.4e-33 Score=350.34 Aligned_cols=200 Identities=29% Similarity=0.453 Sum_probs=164.5
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1426)
++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++.+... ++.++||+|++.+|+ .|
T Consensus 354 ~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~t 429 (574)
T PRK11160 354 PVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-AT 429 (574)
T ss_pred cceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-cc
Confidence 5899999999999999999999999999999999999998 9999999999887654 467999999987665 69
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCC------cccccccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL------EVCADTMV 316 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~dt~v 316 (1426)
++||+.++..- ...+. +...++..|+ ++..||.+
T Consensus 430 i~~Ni~~~~~~----~~~~~------------------------------------i~~al~~~~l~~~i~~p~GldT~v 469 (574)
T PRK11160 430 LRDNLLLAAPN----ASDEA------------------------------------LIEVLQQVGLEKLLEDDKGLNAWL 469 (574)
T ss_pred HHHHhhcCCCc----cCHHH------------------------------------HHHHHHHcCCHHHHcCccccCchh
Confidence 99999886320 00001 1122222222 56789999
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
|+.+ +.||||||||++||||++++|++++|||||++||+.++..|.+.|++.. .++|+|+. .|..+. ...+|+|+
T Consensus 470 ge~g-~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~~~tviii-tHr~~~-~~~~d~i~ 544 (574)
T PRK11160 470 GEGG-RQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--QNKTVLMI-THRLTG-LEQFDRIC 544 (574)
T ss_pred cCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--CCCEEEEE-ecChhH-HHhCCEEE
Confidence 9864 4799999999999999999999999999999999999999999999864 35666664 444444 46699999
Q ss_pred EecCCeEEEecChhhHHH
Q 000556 397 LLSDGQIVYQGPRELVLE 414 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1426)
+|++|++++.|+++++++
T Consensus 545 ~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 545 VMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEeCCeEEEeCCHHHHHh
Confidence 999999999999998864
No 472
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-34 Score=322.72 Aligned_cols=217 Identities=25% Similarity=0.388 Sum_probs=180.1
Q ss_pred ccCCCceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEE
Q 000556 822 LPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNIT 901 (1426)
Q Consensus 822 ~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~ 901 (1426)
+......+.|+||++.|+ +++++|+||||++.||+.+||+|||||||||+|++|.+..+ ..+|.|+
T Consensus 531 l~~~~G~i~fsnvtF~Y~------------p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffd--v~sGsI~ 596 (790)
T KOG0056|consen 531 LKVTQGKIEFSNVTFAYD------------PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFD--VNSGSIT 596 (790)
T ss_pred ccccCCeEEEEEeEEecC------------CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhh--ccCceEE
Confidence 344567899999999996 34689999999999999999999999999999999997654 4589999
Q ss_pred EcCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHH-----HHHHHHHHHcCCcccccccc
Q 000556 902 ISGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRK-----MFIEEVMELVELKPLIQSLV 973 (1426)
Q Consensus 902 i~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~-----~~v~~~l~~l~L~~~~~~~v 973 (1426)
|||++++. .+.|+.+|.||||..++. -|+..|+.|+. | +..+++.. ..+.+ +.++..+-.++.|
T Consensus 597 iDgqdIrnvt~~SLRs~IGVVPQDtvLFN-dTI~yNIryak----~-~AsneevyaAAkAA~IHd--rIl~fPegY~t~V 668 (790)
T KOG0056|consen 597 IDGQDIRNVTQSSLRSSIGVVPQDTVLFN-DTILYNIRYAK----P-SASNEEVYAAAKAAQIHD--RILQFPEGYNTRV 668 (790)
T ss_pred EcCchHHHHHHHHHHHhcCcccCcceeec-ceeeeheeecC----C-CCChHHHHHHHHHhhHHH--HHhcCchhhhhhh
Confidence 99999764 457888999999998875 58889998752 1 12222211 11211 2367778889999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEE
Q 000556 974 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFL 1053 (1426)
Q Consensus 974 g~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~l 1053 (1426)
|..|. .|||||||||+|||+++++|.|++|||+||+||..+.+.|+..|.+++. +||-|++.|+.|. .-.+|.|++
T Consensus 669 GERGL-kLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca-~RTtIVvAHRLST--ivnAD~ILv 744 (790)
T KOG0056|consen 669 GERGL-KLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA-NRTTIVVAHRLST--IVNADLILV 744 (790)
T ss_pred hhccc-ccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc-CCceEEEeeeehh--eecccEEEE
Confidence 98765 5999999999999999999999999999999999999999999999975 7999999999874 445799999
Q ss_pred EecCcEEEEEcC
Q 000556 1054 MKRGGQEIYVGP 1065 (1426)
Q Consensus 1054 l~~gg~~v~~G~ 1065 (1426)
+++ |+++..|.
T Consensus 745 i~~-G~IvErG~ 755 (790)
T KOG0056|consen 745 ISN-GRIVERGR 755 (790)
T ss_pred EeC-CeEeecCc
Confidence 986 79998886
No 473
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-32 Score=311.50 Aligned_cols=211 Identities=21% Similarity=0.329 Sum_probs=165.2
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCC-----CccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1426)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ |+...+|+|.++|+++... ..++.++|++|++..
T Consensus 18 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 97 (252)
T PRK14239 18 KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNP 97 (252)
T ss_pred eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCcc
Confidence 358999999999999999999999999999999999853 4212389999999887431 124579999999877
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++ +||+||+.++....+.... ......++.+++.+|+.....+..
T Consensus 98 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 142 (252)
T PRK14239 98 FP-MSIYENVVYGLRLKGIKDK---------------------------------QVLDEAVEKSLKGASIWDEVKDRL- 142 (252)
T ss_pred Cc-CcHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhHHHHH-
Confidence 76 8999999886533221000 001123456677777743211111
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+..++.|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.+ + .+|+.++|+.+++.+.+|+|++
T Consensus 143 ~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~ 219 (252)
T PRK14239 143 HDSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGF 219 (252)
T ss_pred hcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEE
Confidence 234567999999999999999999999999999999999999999999998753 3 4555577888889999999999
Q ss_pred ecCCeEEEecChhhHH
Q 000556 398 LSDGQIVYQGPRELVL 413 (1426)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1426)
|++|++++.|+.+++.
T Consensus 220 l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 220 FLDGDLIEYNDTKQMF 235 (252)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999998764
No 474
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-32 Score=311.28 Aligned_cols=212 Identities=21% Similarity=0.294 Sum_probs=167.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCC-----CccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1426)
..+|+|+|++|++||+++|+||||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|++..
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 459999999999999999999999999999999999985 3111389999999887532 124579999999989
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++.+||+||+.++.+..+.... .+....++.+++.+|+........
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 142 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVNR---------------------------------SEADEIVESSLKRVALWDEVKDRL- 142 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-
Confidence 9999999999876432210000 001123566788888864211111
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+..+..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.+ + ++|+.++|..+++.+++|++++
T Consensus 143 ~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~ 219 (252)
T PRK14256 143 KSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAF 219 (252)
T ss_pred hCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEE
Confidence 134557999999999999999999999999999999999999999999999853 3 4555577888889999999999
Q ss_pred ecCCeEEEecChhhHH
Q 000556 398 LSDGQIVYQGPRELVL 413 (1426)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1426)
|++|+++..|+.+++.
T Consensus 220 l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 220 FYMGDLVECGETKKIF 235 (252)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988763
No 475
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-32 Score=313.83 Aligned_cols=210 Identities=21% Similarity=0.319 Sum_probs=163.1
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCC--C---ccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHDMGEF--V---PERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~~ 237 (1426)
..+|+|+|++|++||+++|+|||||||||||++|+|.+++.. ..+|+|.++|.++... . .++.++|++|++.+
T Consensus 26 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 105 (269)
T PRK14259 26 FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNP 105 (269)
T ss_pred EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCcc
Confidence 358999999999999999999999999999999999986310 1389999999876421 1 13569999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++ .||+||+.++....+... + ....++.+++.+++....+...
T Consensus 106 ~~-~tv~enl~~~~~~~~~~~------~-----------------------------~~~~~~~~l~~~~l~~~l~~~~- 148 (269)
T PRK14259 106 FP-KSIYENIAFGARINGYTG------D-----------------------------MDELVERSLRKAAVWDECKDKL- 148 (269)
T ss_pred ch-hhHHHHHhhhhhhcCCcH------H-----------------------------HHHHHHHHHHHhCCcchhhhhh-
Confidence 87 599999998754322100 0 0112344566666642111111
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+..++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++.+++|++++
T Consensus 149 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~i~~ 225 (269)
T PRK14259 149 NESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK--N-FTIVIVTHNMQQAVRVSDMTAF 225 (269)
T ss_pred CCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCEEEE
Confidence 234567999999999999999999999999999999999999999999998742 3 4556678888899999999999
Q ss_pred ecC-----------CeEEEecChhhHHH
Q 000556 398 LSD-----------GQIVYQGPRELVLE 414 (1426)
Q Consensus 398 L~~-----------G~iv~~G~~~~~~~ 414 (1426)
|++ |++++.|+.+++.+
T Consensus 226 l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 226 FNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred EeccccccccccccceEEEeCCHHHHHh
Confidence 996 67899999988753
No 476
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.8e-32 Score=306.79 Aligned_cols=210 Identities=23% Similarity=0.277 Sum_probs=166.9
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEc--Cc-
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITIS--GY- 905 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~--g~- 905 (1426)
+.++|+++.++.... ...++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++ |.
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLP--DSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEEecCCCc
Confidence 567888877742100 00124699999999999999999999999999999999998653 47999998 42
Q ss_pred -cCCc---cc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCC
Q 000556 906 -PKKQ---ET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLP 976 (1426)
Q Consensus 906 -~~~~---~~----~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~ 976 (1426)
+... .. .++.++|++|++.+++.+||.|++.+..... ....+...+.+.++++.+++.+. .+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 146 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP---- 146 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC----
Confidence 3221 11 1346899999998899999999998754332 12233344568889999999763 3444
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEe
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1055 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~ 1055 (1426)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+.+|+++.+.
T Consensus 147 -~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 147 -PATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 4579999999999999999999999999999999999999999999999877999999999964 3557899998764
No 477
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=8.7e-33 Score=357.89 Aligned_cols=206 Identities=23% Similarity=0.392 Sum_probs=161.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|. .
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~-g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFS-G 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCccccc-c
Confidence 46899999999999999999999999999999999999998 9999999999877654 468999999987665 6
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
|+||||.++.... + .+.+. +++...+ .++.++ .+++..||.+|+.+
T Consensus 570 TIreNI~~g~~~~---~-~e~i~---------------------~al~~a~------l~~~i~--~lp~GldT~ige~G- 615 (711)
T TIGR00958 570 SVRENIAYGLTDT---P-DEEIM---------------------AAAKAAN------AHDFIM--EFPNGYDTEVGEKG- 615 (711)
T ss_pred CHHHHHhcCCCCC---C-HHHHH---------------------HHHHHcC------CHHHHH--hCCCccCCcccCCC-
Confidence 9999999864210 0 01111 1111000 111222 35667899999765
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
..||||||||++||||++++|+|++||||||+||+.+...+.+ ... ..++|+|+ ++|.. ++.+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~~~~TvIi-ItHrl-~~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---RASRTVLL-IAHRL-STVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---cCCCeEEE-EeccH-HHHHhCCEEEEEECC
Confidence 4799999999999999999999999999999999999988888 221 23455555 55554 456779999999999
Q ss_pred eEEEecChhhHHH
Q 000556 402 QIVYQGPRELVLE 414 (1426)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1426)
+|+++|+++++.+
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999864
No 478
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-32 Score=309.99 Aligned_cols=212 Identities=19% Similarity=0.274 Sum_probs=167.1
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1426)
+.+|+|+|+++++||+++|+||||||||||+++|+|.+++....+|+|+++|+++.+... ++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 458999999999999999999999999999999999975311238999999998765422 356999999988776 6
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000556 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1426)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1426)
||+||+.++...++.... . ......++.+++.+||........ ++..
T Consensus 94 tv~eni~~~~~~~~~~~~-------------------~-------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~ 140 (246)
T PRK14269 94 SIYENISYAPKLHGMIKN-------------------K-------------DEEEALVVDCLQKVGLFEEVKDKL-KQNA 140 (246)
T ss_pred cHHHHhhhHHhhcCcccC-------------------h-------------HHHHHHHHHHHHHcCCChhhhHHh-cCCc
Confidence 999999886433211000 0 001223566788889853211111 2345
Q ss_pred ccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000556 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1426)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G 401 (1426)
+.|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++. .+ ++++.++|+.+++.+.+|+|++|++|
T Consensus 141 ~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~l~~G 217 (246)
T PRK14269 141 LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS--HN-LSMIMVTHNMQQGKRVADYTAFFHLG 217 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--CC-CEEEEEecCHHHHHhhCcEEEEEECC
Confidence 6799999999999999999999999999999999999999999999874 24 45555788888899999999999999
Q ss_pred eEEEecChhhHH
Q 000556 402 QIVYQGPRELVL 413 (1426)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1426)
++++.|+.+++.
T Consensus 218 ~i~~~g~~~~~~ 229 (246)
T PRK14269 218 ELIEFGESKEFF 229 (246)
T ss_pred EEEEECCHHHHH
Confidence 999999988764
No 479
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-32 Score=316.89 Aligned_cols=221 Identities=23% Similarity=0.293 Sum_probs=175.3
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCC---ceEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 904 (1426)
.+.++|+++.+. .+.+|+|+|++|++||+++|+|+|||||||||++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 588999998773 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC---------CCC-HHHHHHHHHHHHHHcCCcccc
Q 000556 905 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP---------EVD-SETRKMFIEEVMELVELKPLI 969 (1426)
Q Consensus 905 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~---------~~~-~~~~~~~v~~~l~~l~L~~~~ 969 (1426)
.++.. ...++.++|++|++.+++ .||+||+.+....+... ... .+..++.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87642 123567999999988777 59999998864321100 011 122345688899999885422
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcc
Q 000556 970 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFD 1049 (1426)
Q Consensus 970 ~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD 1049 (1426)
+..... .+..||||||||++||++|+.+|+||||||||+|||+.++..+++.|+++++ +.|||+++|+++ .+.+.+|
T Consensus 191 ~~~~~~-~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLDD-NALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhcC-ccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 222211 2468999999999999999999999999999999999999999999999976 589999999986 4778899
Q ss_pred eEE-EEecCcEEEEEcCC
Q 000556 1050 ELF-LMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1050 ~v~-ll~~gg~~v~~G~~ 1066 (1426)
+++ +|++ |+++..|+.
T Consensus 268 ~i~~~l~~-G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLTG-GELVEYDDT 284 (305)
T ss_pred EEEEEecC-CEEEEeCCH
Confidence 974 6674 799999875
No 480
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.2e-34 Score=290.22 Aligned_cols=206 Identities=25% Similarity=0.384 Sum_probs=178.1
Q ss_pred CceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCc---ccccceEEEeccCCCCCCC
Q 000556 852 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPF 928 (1426)
Q Consensus 852 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~ 928 (1426)
+++.+|+|+|..|++|.+++|+|||||||||||.++++... ..+|+|+++|.++.. ...++..+..-|+......
T Consensus 12 ~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~r 89 (252)
T COG4604 12 GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHINSR 89 (252)
T ss_pred CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhhhe
Confidence 46789999999999999999999999999999999998665 458999999998654 3456667888898888889
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCC
Q 000556 929 VTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1008 (1426)
Q Consensus 929 lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPT 1008 (1426)
+||+|-+.|+..-.....+ .++.+..++++++.++|.+..|+.. ..||||||||.-||+.|+.+.+.++||||.
T Consensus 90 lTV~dLv~FGRfPYSqGRl-t~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDEPL 163 (252)
T COG4604 90 LTVRDLVGFGRFPYSQGRL-TKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLDEPL 163 (252)
T ss_pred eEHHHHhhcCCCcccCCCC-chHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEecCcc
Confidence 9999999987432222223 3445567999999999999999874 689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCC
Q 000556 1009 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1426)
Q Consensus 1009 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~ 1067 (1426)
++||...+..+|+.||+++++ |+|||++.||.+. ..-+.|+|+-|++ |+++..|+.+
T Consensus 164 NNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~ 221 (252)
T COG4604 164 NNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPD 221 (252)
T ss_pred cccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHH
Confidence 999999999999999999987 9999999999875 4567799999986 8999999975
No 481
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=3.5e-32 Score=297.06 Aligned_cols=170 Identities=41% Similarity=0.670 Sum_probs=147.6
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCceeEEEEcCccCCCCCccceEEEecCCCCCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKL--DSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1426)
+.+|+|+|+++++|++++|+||||||||||+++|+|.+ +|. +|+|.++|+++.....++.++|++|++..++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 45899999999999999999999999999999999999 877 9999999998764333567999999998899999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
++||+.+..++ .
T Consensus 99 ~~~~i~~~~~~--------------------------------------------------------------------~ 110 (194)
T cd03213 99 VRETLMFAAKL--------------------------------------------------------------------R 110 (194)
T ss_pred HHHHHHHHHHh--------------------------------------------------------------------c
Confidence 99999763210 0
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCc-hhHHhhcCeEEEecCC
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPA-PETYDLFDDIILLSDG 401 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~-~~~~~~fD~vilL~~G 401 (1426)
.||||||||++||+||+.+|++++|||||+|||..+...+.+.|+++.. .+.|+|+ ++|+. .++.+.+|++++|++|
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii-~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLAD-TGRTIIC-SIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEE-EecCchHHHHHhcCEEEEEeCC
Confidence 4999999999999999999999999999999999999999999998754 3555555 55555 4788899999999999
Q ss_pred eEEEec
Q 000556 402 QIVYQG 407 (1426)
Q Consensus 402 ~iv~~G 407 (1426)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998765
No 482
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-32 Score=310.14 Aligned_cols=211 Identities=21% Similarity=0.346 Sum_probs=166.0
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCceeEEEEcCccCCCC-----CccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDS--SLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1426)
..+|+|+|+++++||+++|+|||||||||||++|+|.+++ ....+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 3589999999999999999999999999999999999874 111389999999887532 123579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++ +||+||+.++....+.... ...+..+++.++.+|+....+.. .
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~ 140 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKSK---------------------------------HKLDRIVEESLKKAALWDEVKSE-L 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCchhHHH-H
Confidence 77 8999999886532211000 00112345667777875321111 2
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+..++.||||||||++||+||+.+|++++|||||+|||..+...+.+.|+++.. + ++|+.++|+..++.+++|+|++
T Consensus 141 ~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tili~sH~~~~~~~~~d~i~~ 217 (250)
T PRK14262 141 NKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--N-YTIVIVTHNIGQAIRIADYIAF 217 (250)
T ss_pred hCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--C-cEEEEEeCCHHHHHHhCCEEEE
Confidence 344568999999999999999999999999999999999999999999998753 4 4555577887888999999999
Q ss_pred ecCCeEEEecChhhHH
Q 000556 398 LSDGQIVYQGPRELVL 413 (1426)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1426)
|++|+++..|+.+++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 218 MYRGELIEYGPTREIV 233 (250)
T ss_pred EECCEEEEecCHHHHH
Confidence 9999999999988764
No 483
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2.4e-32 Score=309.89 Aligned_cols=198 Identities=24% Similarity=0.329 Sum_probs=166.8
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
-+.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~~~-- 66 (251)
T PRK09544 4 LVSLENVSVSFG-------------QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVA--PDEGVIKRNGK-- 66 (251)
T ss_pred EEEEeceEEEEC-------------CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCc--
Confidence 378899988773 2359999999999999999999999999999999999865 34799999872
Q ss_pred CcccccceEEEeccCCCCCCC--CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000556 908 KQETFARISGYCEQNDIHSPF--VTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 985 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~--lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 985 (1426)
..++|++|++.+++. .|+.+++.+. + ... ++.+.++++.+++.+..++.+ ..|||||
T Consensus 67 ------~~i~~v~q~~~~~~~l~~~~~~~~~~~-----~-~~~----~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq 125 (251)
T PRK09544 67 ------LRIGYVPQKLYLDTTLPLTVNRFLRLR-----P-GTK----KEDILPALKRVQAGHLIDAPM-----QKLSGGE 125 (251)
T ss_pred ------cCEEEeccccccccccChhHHHHHhcc-----c-ccc----HHHHHHHHHHcCChHHHhCCh-----hhCCHHH
Confidence 358999999877765 4777776431 1 111 234788999999998877763 5799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEc
Q 000556 986 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1064 (1426)
Q Consensus 986 rqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G 1064 (1426)
|||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|+ + +++..|
T Consensus 126 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~i~~l~-~-~i~~~g 202 (251)
T PRK09544 126 TQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDEVLCLN-H-HICCSG 202 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEC-C-ceEeeC
Confidence 99999999999999999999999999999999999999998765 899999999986 5778899999995 4 578888
Q ss_pred CC
Q 000556 1065 PL 1066 (1426)
Q Consensus 1065 ~~ 1066 (1426)
+.
T Consensus 203 ~~ 204 (251)
T PRK09544 203 TP 204 (251)
T ss_pred CH
Confidence 75
No 484
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-32 Score=309.62 Aligned_cols=208 Identities=18% Similarity=0.279 Sum_probs=162.6
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCceeEEEEcCccCCCCC-----ccceEEEecCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD-----SSLKVSGRVTYNGHDMGEFV-----PERTAAYISQH 234 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~ 234 (1426)
..+|+|+|+.+++||+++|+|||||||||||++|+|..+ |+ +|+|.++|+++.... .++.++|++|+
T Consensus 34 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~ 110 (268)
T PRK14248 34 KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQK 110 (268)
T ss_pred ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecC
Confidence 358999999999999999999999999999999999864 44 899999998875321 13569999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccc
Q 000556 235 DNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1426)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1426)
+..++. ||+||+.++....+.... ...+..+...++.+++.+....
T Consensus 111 ~~~~~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~ 156 (268)
T PRK14248 111 PNPFPK-SIYNNITHALKYAGERRK---------------------------------SVLDEIVEESLTKAALWDEVKD 156 (268)
T ss_pred CccCcc-cHHHHHHHHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCCcchHH
Confidence 887875 999999876432110000 0001123455677777421111
Q ss_pred cccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCe
Q 000556 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1426)
Q Consensus 315 ~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~ 394 (1426)
.. +..+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+++|+
T Consensus 157 ~~-~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~ 232 (268)
T PRK14248 157 RL-HSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALRVSDR 232 (268)
T ss_pred HH-hcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHHhCCE
Confidence 11 234557999999999999999999999999999999999999999999999753 3 4555577888889999999
Q ss_pred EEEecCCeEEEecChhhHH
Q 000556 395 IILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1426)
|++|++|++++.|+.+++.
T Consensus 233 v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 233 TAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 485
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.7e-32 Score=342.56 Aligned_cols=215 Identities=23% Similarity=0.279 Sum_probs=175.1
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcC----
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG---- 904 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g---- 904 (1426)
++.+|+++.+. ++.+|+|+|+++++||++||+|||||||||||++|+|.....+.+|+|.++|
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~ 67 (520)
T TIGR03269 1 IEVKNLTKKFD-------------GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCE 67 (520)
T ss_pred CEEEEEEEEEC-------------CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccc
Confidence 35678887763 2469999999999999999999999999999999999741013479999872
Q ss_pred -------------------ccCC----------c---ccccceEEEeccC-CCCCCCCCHHHHHHHHHHhcCCCCCCHHH
Q 000556 905 -------------------YPKK----------Q---ETFARISGYCEQN-DIHSPFVTVYESLLYSAWLRLPPEVDSET 951 (1426)
Q Consensus 905 -------------------~~~~----------~---~~~~~~~gyv~q~-~~~~~~lTv~e~l~f~a~lr~~~~~~~~~ 951 (1426)
.++. . ...++.++|++|+ +.+++.+||+|++.+..... ..+.++
T Consensus 68 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~ 144 (520)
T TIGR03269 68 KCGYVERPSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEI---GYEGKE 144 (520)
T ss_pred cccccccccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHc---CCCHHH
Confidence 1110 0 1134568999997 67788899999998865432 123344
Q ss_pred HHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CC
Q 000556 952 RKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TG 1030 (1426)
Q Consensus 952 ~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g 1030 (1426)
.++++.++++.+||.+..+..+ ..|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++++ .|
T Consensus 145 ~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g 219 (520)
T TIGR03269 145 AVGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASG 219 (520)
T ss_pred HHHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcC
Confidence 4567899999999988777663 57999999999999999999999999999999999999999999999965 49
Q ss_pred CEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCC
Q 000556 1031 RTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1031 ~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~ 1066 (1426)
+|||+++|++. .+.+.+|++++|++ |++++.|+.
T Consensus 220 ~tviivtHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 253 (520)
T TIGR03269 220 ISMVLTSHWPE-VIEDLSDKAIWLEN-GEIKEEGTP 253 (520)
T ss_pred cEEEEEeCCHH-HHHHhcCEEEEEeC-CEEeeecCH
Confidence 99999999986 46788999999986 788888765
No 486
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-32 Score=312.22 Aligned_cols=211 Identities=24% Similarity=0.327 Sum_probs=167.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCCC----ccceEEEecCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFV----PERTAAYISQHDNHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~~~ 238 (1426)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|. ...+|+|.++|.++.+.. .++.++|++|++.++
T Consensus 34 ~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~ 113 (276)
T PRK14271 34 KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPF 113 (276)
T ss_pred EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccC
Confidence 46899999999999999999999999999999999998751 013899999998875432 245789999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+ +||+||+.++......... .+....++.+++.+||.+..++.. +
T Consensus 114 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~ 158 (276)
T PRK14271 114 P-MSIMDNVLAGVRAHKLVPR---------------------------------KEFRGVAQARLTEVGLWDAVKDRL-S 158 (276)
T ss_pred C-ccHHHHHHHHHHhccCCCH---------------------------------HHHHHHHHHHHHHcCCCchhhhHh-h
Confidence 7 8999999876432110000 001123456678888875332222 2
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
..++.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.+ + ++|+.++|+.+++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l 235 (276)
T PRK14271 159 DSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALF 235 (276)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 45555788888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000556 399 SDGQIVYQGPRELVL 413 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1426)
++|++++.|+.+++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 236 FDGRLVEEGPTEQLF 250 (276)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999998774
No 487
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-32 Score=312.39 Aligned_cols=213 Identities=29% Similarity=0.393 Sum_probs=168.8
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-----CCceeEEEEcCccCCCCCc---cceEEEecCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS-----LKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN 236 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~-----~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~ 236 (1426)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|.++..... ++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 45999999999999999999999999999999999999874 1137999999988754332 345899999987
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1426)
.++.+||+||+.++...... .. ...+ .+....++.+++.+||++..++.
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~--~~-------------~~~~---------------~~~~~~~~~~l~~~~l~~~~~~~- 142 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHAR--RA-------------GALT---------------HRDGEIAWQALALAGATALVGRD- 142 (272)
T ss_pred CCCCCcHHHHHhhccccccc--cc-------------ccCC---------------HHHHHHHHHHHHHcCcHhhhcCC-
Confidence 66779999999875321000 00 0000 01123456788999998665544
Q ss_pred cCcccccCChhHhhHHHHHHHHh---------cCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchh
Q 000556 317 GDEMIRGISGGERKRVTTGEMMV---------GPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPE 387 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~---------~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~ 387 (1426)
+..|||||||||+||++|+ .+|++|+|||||+|||+.+...+.+.|+++.+..+ ++|+.++|+..+
T Consensus 143 ----~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tviiisH~~~~ 217 (272)
T PRK13547 143 ----VTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWN-LGVLAIVHDPNL 217 (272)
T ss_pred ----cccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHH
Confidence 4579999999999999999 59999999999999999999999999999865324 445557788888
Q ss_pred HHhhcCeEEEecCCeEEEecChhhHH
Q 000556 388 TYDLFDDIILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 388 ~~~~fD~vilL~~G~iv~~G~~~~~~ 413 (1426)
+.+++|++++|++|++++.|+.+++.
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHHc
Confidence 88999999999999999999987763
No 488
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-32 Score=310.38 Aligned_cols=212 Identities=20% Similarity=0.306 Sum_probs=166.4
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCceeEEEEcCccCCCCC-----ccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1426)
+.+|+|+|+.|++|++++|+||||||||||+++|+|..+ |....+|+|+++|.++.... .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 468999999999999999999999999999999999975 21113899999998764321 24579999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCccccccccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1426)
++. ||+||+.+.....+..... .+....++.+++.+||.+...+.+
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 143 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKNK--------------------------------KKLDEIVEKSLTSVGLWEELGDRL- 143 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHh-
Confidence 875 9999998864322110000 001123566788899865322222
Q ss_pred CcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEE
Q 000556 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1426)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vil 397 (1426)
+..++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++. .+ .+|+.++|...++.+++|+|++
T Consensus 144 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~~~d~i~~ 220 (251)
T PRK14244 144 KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--KN-FTIIVVTHSMKQAKKVSDRVAF 220 (251)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhcCEEEE
Confidence 23456799999999999999999999999999999999999999999999874 24 4555577888888999999999
Q ss_pred ecCCeEEEecChhhHH
Q 000556 398 LSDGQIVYQGPRELVL 413 (1426)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1426)
|++|++++.|+.+++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988764
No 489
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-32 Score=311.60 Aligned_cols=210 Identities=20% Similarity=0.271 Sum_probs=167.6
Q ss_pred cceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCCC-----CccceEEEecCCCC
Q 000556 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEF-----VPERTAAYISQHDN 236 (1426)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 236 (1426)
+..+|+|+|+.++|||+++|+||||||||||+++|+|.++|. ...+|+|+++|+++... ..++.++|++|++.
T Consensus 20 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 99 (261)
T PRK14263 20 NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPN 99 (261)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCc
Confidence 457999999999999999999999999999999999999761 01389999999987432 12356999999987
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccc
Q 000556 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1426)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1426)
.+ .+|++||+.++....+.. . +....++.+++.+||.+..+...
T Consensus 100 ~~-~~tv~enl~~~~~~~~~~------~-----------------------------~~~~~~~~~l~~~~l~~~i~~~~ 143 (261)
T PRK14263 100 PF-SMSIFDNVAFGLRLNRYK------G-----------------------------DLGDRVKHALQGAALWDEVKDKL 143 (261)
T ss_pred cc-cccHHHHHHHHHhhcCch------H-----------------------------HHHHHHHHHHHHcCCchhhhhhh
Confidence 76 599999999875432110 0 01123456778888754332222
Q ss_pred cCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 317 G~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
+ ...+.||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++. .+ ++++.++|+..++.+++|+|+
T Consensus 144 ~-~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~--~~-~tii~isH~~~~i~~~~d~v~ 219 (261)
T PRK14263 144 K-VSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK--KD-YTIALVTHNMQQAIRVADTTA 219 (261)
T ss_pred h-CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCEEE
Confidence 2 3456899999999999999999999999999999999999999999999874 23 456667888888999999999
Q ss_pred Eec--------CCeEEEecChhhHH
Q 000556 397 LLS--------DGQIVYQGPRELVL 413 (1426)
Q Consensus 397 lL~--------~G~iv~~G~~~~~~ 413 (1426)
+|+ +|++++.|+.+++.
T Consensus 220 ~l~~~~~~~~~~G~i~~~g~~~~~~ 244 (261)
T PRK14263 220 FFSVDISQGTRTGYLVEMGPTAQIF 244 (261)
T ss_pred EEecccccccCCceEEEeCCHHHHH
Confidence 996 89999999988764
No 490
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-32 Score=325.63 Aligned_cols=208 Identities=19% Similarity=0.281 Sum_probs=171.1
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
.+.++|+++.++.. ..+.+|+||||++++|+++||+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 21 mL~lknL~~~~~~~----------~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P--~sGeI~I~G~~~ 88 (549)
T PRK13545 21 FDKLKDLFFRSKDG----------EYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMP--NKGTVDIKGSAA 88 (549)
T ss_pred eeEEEEEEEecCCC----------ccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CceEEEECCEee
Confidence 47788887766421 124699999999999999999999999999999999998763 489999999641
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000556 908 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 987 (1426)
Q Consensus 908 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 987 (1426)
++.+...+.+.+|++|++.+..... ..+.++..+.++++++.+++.+..+..+ +.|||||||
T Consensus 89 ----------~i~~~~~l~~~lTV~EnL~l~~~~~---~~~~~e~~e~i~elLe~lgL~~~ld~~~-----~~LSGGQrQ 150 (549)
T PRK13545 89 ----------LIAISSGLNGQLTGIENIELKGLMM---GLTKEKIKEIIPEIIEFADIGKFIYQPV-----KTYSSGMKS 150 (549)
T ss_pred ----------eEEeccccCCCCcHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCc-----ccCCHHHHH
Confidence 1222334566789999998754332 1233444556788999999988877764 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEEEcCCC
Q 000556 988 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1067 (1426)
Q Consensus 988 Rl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~~G~~~ 1067 (1426)
|++|||||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.||++++|++ |++++.|+..
T Consensus 151 RVaLArAL~~~P~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~~-GkIv~~G~~~ 228 (549)
T PRK13545 151 RLGFAISVHINPDILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLHY-GQVKEYGDIK 228 (549)
T ss_pred HHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999999999999999999999877999999999986 57788999999985 7899998753
No 491
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.4e-32 Score=300.12 Aligned_cols=193 Identities=24% Similarity=0.334 Sum_probs=162.1
Q ss_pred eEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000556 829 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 908 (1426)
Q Consensus 829 l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 908 (1426)
+.++|+++.+. ++.+|+|+|+++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~ 66 (200)
T PRK13540 2 LDVIELDFDYH-------------DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLN--PEKGEILFERQSIK 66 (200)
T ss_pred EEEEEEEEEeC-------------CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeeEEECCCccc
Confidence 56788887763 2469999999999999999999999999999999999876 35899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000556 909 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 986 (1426)
Q Consensus 909 ~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 986 (1426)
. ..+++.++|++|+..+++..||+|++.+.... .. . ...++++++.+++.+..+..+ ..||+|||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~~~~~~~~--~~----~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 133 (200)
T PRK13540 67 KDLCTYQKQLCFVGHRSGINPYLTLRENCLYDIHF--SP----G--AVGITELCRLFSLEHLIDYPC-----GLLSSGQK 133 (200)
T ss_pred cCHHHHHhheEEeccccccCcCCCHHHHHHHHHhc--Cc----c--hHHHHHHHHHcCCchhhhCCh-----hhcCHHHH
Confidence 3 23456799999998888899999999876421 11 1 235789999999987666653 47999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceE
Q 000556 987 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDEL 1051 (1426)
Q Consensus 987 qRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v 1051 (1426)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ..+.+|..
T Consensus 134 ~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~ 196 (200)
T PRK13540 134 RQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDL--PLNKADYE 196 (200)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCch--hccccchh
Confidence 9999999999999999999999999999999999999998777999999999975 34556654
No 492
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=8.3e-33 Score=359.54 Aligned_cols=207 Identities=26% Similarity=0.355 Sum_probs=165.6
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1426)
++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|++||.++.+... ++.++||+|++.+|+ .|
T Consensus 488 ~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-gT 563 (708)
T TIGR01193 488 NILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFS-GS 563 (708)
T ss_pred cceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceehh-HH
Confidence 5899999999999999999999999999999999999998 9999999999877654 468999999987765 59
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000556 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1426)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1426)
++|||.++.+.. .+.++..+++...+ .++.+ ..++...||.||+.+ .
T Consensus 564 I~eNi~l~~~~~------------------------~~~~~i~~a~~~a~------l~~~i--~~lp~gldt~i~e~G-~ 610 (708)
T TIGR01193 564 ILENLLLGAKEN------------------------VSQDEIWAACEIAE------IKDDI--ENMPLGYQTELSEEG-S 610 (708)
T ss_pred HHHHHhccCCCC------------------------CCHHHHHHHHHHhC------CHHHH--HhcccccCcEecCCC-C
Confidence 999999863110 01111111111000 11112 246677899999865 4
Q ss_pred cCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000556 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1426)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL~~G~ 402 (1426)
+||||||||++||||++++|++|+||||||+||+.+...+.+.|+++ .++|+|+ ++|.. ++.+.+|+|++|++|+
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~Ii-itHr~-~~~~~~D~i~~l~~G~ 685 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIF-VAHRL-SVAKQSDKIIVLDHGK 685 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEE-Eecch-HHHHcCCEEEEEECCE
Confidence 79999999999999999999999999999999999999999999874 2456555 55554 4668899999999999
Q ss_pred EEEecChhhHHH
Q 000556 403 IVYQGPRELVLE 414 (1426)
Q Consensus 403 iv~~G~~~~~~~ 414 (1426)
+++.|+++++++
T Consensus 686 i~~~G~~~~L~~ 697 (708)
T TIGR01193 686 IIEQGSHDELLD 697 (708)
T ss_pred EEEECCHHHHHh
Confidence 999999998864
No 493
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.2e-32 Score=323.15 Aligned_cols=227 Identities=25% Similarity=0.362 Sum_probs=192.0
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 907 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 907 (1426)
-++.+|++-++ +..++|+||||++++||++||||.||||||||+|+|+|-.. +.+|+|.+||.+.
T Consensus 8 ll~~~~i~K~F-------------ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~ 72 (500)
T COG1129 8 LLELRGISKSF-------------GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPV 72 (500)
T ss_pred eeeeecceEEc-------------CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEc
Confidence 46788887665 34579999999999999999999999999999999999776 4589999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000556 908 KQE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRL-PPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 982 (1426)
Q Consensus 908 ~~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 982 (1426)
... ....-++.|.|+..+.|++||.||+.++...+. ..-++...-.+...++|+.+++....+++++ .||
T Consensus 73 ~~~sp~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~-----~Ls 147 (500)
T COG1129 73 AFSSPRDALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVG-----DLS 147 (500)
T ss_pred cCCCHHHHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhh-----hCC
Confidence 532 234568999999999999999999987765443 2335666777788999999999644777754 799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecCcEEEE
Q 000556 983 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1062 (1426)
Q Consensus 983 gGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~gg~~v~ 1062 (1426)
.||||.|.|||||..+++||+||||||.|+......+.+.++++.++|.+||++||... |+++.|||+.||.+ |+.+-
T Consensus 148 iaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~ 225 (500)
T COG1129 148 IAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVG 225 (500)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEee
Confidence 99999999999999999999999999999999999999999999999999999999997 89999999999986 78888
Q ss_pred EcCC-Cc-chhHHHHH
Q 000556 1063 VGPL-GR-HSCQLISY 1076 (1426)
Q Consensus 1063 ~G~~-~~-~~~~~~~y 1076 (1426)
.++. ++ ...+++..
T Consensus 226 ~~~~~~~~~~~~lv~~ 241 (500)
T COG1129 226 TRPTAAETSEDELVRL 241 (500)
T ss_pred ecccccCCCHHHHHHH
Confidence 8873 33 22344444
No 494
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=2.1e-32 Score=295.94 Aligned_cols=159 Identities=25% Similarity=0.440 Sum_probs=141.4
Q ss_pred EeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCC
Q 000556 856 LLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPF 928 (1426)
Q Consensus 856 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~ 928 (1426)
+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|+. .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPP--ASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 79999999999999999999999999999999998763 479999999876432 2356799999984 57788
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCC
Q 000556 929 VTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1008 (1426)
Q Consensus 929 lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPT 1008 (1426)
+|++||+.+... ||+|||||++||++|+.+|++|+|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999976321 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEecC
Q 000556 1009 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1057 (1426)
Q Consensus 1009 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~g 1057 (1426)
+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++|
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~G 180 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYEG 180 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecCC
Confidence 999999999999999999777999999999986 678889999999864
No 495
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-32 Score=308.82 Aligned_cols=210 Identities=22% Similarity=0.352 Sum_probs=163.9
Q ss_pred eEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCceeEEEEcCccCCCC-----CccceEEEecCCCCCC
Q 000556 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDS--SLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNHI 238 (1426)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1426)
.+|+|+|++|++||+++|+|||||||||||++|+|..++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 589999999999999999999999999999999998753 112389999999987531 1245689999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+ +||+||+.++....+.... .+....++.+++.+++.+...... +
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~-~ 141 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK---------------------------------KKLDEIVEKSLKGAALWDEVKDRL-K 141 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhHHHH-h
Confidence 7 8999999986543221000 001123455667777642111111 2
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
..+..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++. .+. +|+.++|+..++.+.+|+|++|
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~~-tiii~sH~~~~~~~~~d~v~~l 218 (250)
T PRK14240 142 KSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK--KDY-TIVIVTHNMQQASRISDKTAFF 218 (250)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cCC-eEEEEEeCHHHHHhhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999874 244 4555777888899999999999
Q ss_pred cCCeEEEecChhhHH
Q 000556 399 SDGQIVYQGPRELVL 413 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1426)
++|++++.|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 219 LNGEIVEFGDTVDLF 233 (250)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 496
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=8.9e-33 Score=352.16 Aligned_cols=211 Identities=25% Similarity=0.363 Sum_probs=176.8
Q ss_pred ceeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000556 827 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 906 (1426)
Q Consensus 827 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 906 (1426)
..++++|++|.++. ++.+|+|+|++++|||++||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 333 ~~I~~~~vsf~y~~------------~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p--~~G~I~i~g~~ 398 (588)
T PRK13657 333 GAVEFDDVSFSYDN------------SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDP--QSGRILIDGTD 398 (588)
T ss_pred CeEEEEEEEEEeCC------------CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEE
Confidence 36999999999852 13589999999999999999999999999999999998764 48999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000556 907 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 976 (1426)
Q Consensus 907 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 976 (1426)
+.+ ..+++.++||+|++.+++ .|++||+.++. + +.+ ++.++++++.+++.+. .|+.+|..
T Consensus 399 i~~~~~~~~r~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~-~~~----d~~i~~al~~~~l~~~i~~lp~gldt~i~~~ 468 (588)
T PRK13657 399 IRTVTRASLRRNIAVVFQDAGLFN-RSIEDNIRVGR----P-DAT----DEEMRAAAERAQAHDFIERKPDGYDTVVGER 468 (588)
T ss_pred hhhCCHHHHHhheEEEecCccccc-ccHHHHHhcCC----C-CCC----HHHHHHHHHHhCHHHHHHhCcccccchhcCC
Confidence 654 346778999999998886 59999997641 1 222 2336777787776653 35566653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHhhcceEEEEec
Q 000556 977 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1056 (1426)
Q Consensus 977 ~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq~~~~i~~~fD~v~ll~~ 1056 (1426)
...||||||||++|||+|+++|+||+||||||+||+.++..+++.|+++. +++|||++||+++ ..+.+|++++|++
T Consensus 469 -g~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~-~~~tvIiitHr~~--~~~~~D~ii~l~~ 544 (588)
T PRK13657 469 -GRQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELM-KGRTTFIIAHRLS--TVRNADRILVFDN 544 (588)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-cCCEEEEEEecHH--HHHhCCEEEEEEC
Confidence 46799999999999999999999999999999999999999999999875 4799999999985 5788999999985
Q ss_pred CcEEEEEcCC
Q 000556 1057 GGQEIYVGPL 1066 (1426)
Q Consensus 1057 gg~~v~~G~~ 1066 (1426)
|+++..|+.
T Consensus 545 -G~i~~~g~~ 553 (588)
T PRK13657 545 -GRVVESGSF 553 (588)
T ss_pred -CEEEEeCCH
Confidence 788888873
No 497
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-32 Score=308.56 Aligned_cols=208 Identities=23% Similarity=0.347 Sum_probs=164.5
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CceeEEEEcCccCCCC-----CccceEEEecCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1426)
+.+|+|+|+.|++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 469999999999999999999999999999999999987631 1379999999887531 123569999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCc----cccc
Q 000556 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE----VCAD 313 (1426)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1426)
++.+|++||+.++....+...+ + +....++..++.+++. +..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRDR-D--------------------------------HLMEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCCH-H--------------------------------HHHHHHHHHHHHcCcchhhhhhhc
Confidence 9999999999876432211000 0 0011233445555543 2233
Q ss_pred ccccCcccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcC
Q 000556 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1426)
Q Consensus 314 t~vG~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD 393 (1426)
+ .++.||||||||++||++|+.+|++++|||||+|||..+...+.+.|+++++ + ++++.++|+..++.+.+|
T Consensus 144 ~-----~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d 215 (252)
T PRK14272 144 T-----PATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--V-TTIIIVTHNMHQAARVSD 215 (252)
T ss_pred C-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCC
Confidence 3 3457999999999999999999999999999999999999999999998752 4 455557788888999999
Q ss_pred eEEEecCCeEEEecChhhHH
Q 000556 394 DIILLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1426)
+|++|++|++++.|+.+++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 498
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4.3e-32 Score=341.16 Aligned_cols=221 Identities=20% Similarity=0.264 Sum_probs=179.5
Q ss_pred eeEEeceeeEEecchhhhhcccccCceEEeeeeEEEEeCCcEEEEeccCCCchhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000556 828 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 904 (1426)
Q Consensus 828 ~l~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 904 (1426)
-++++|+++.++... ..+.+|+||||++++||++||+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~---------~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 75 (529)
T PRK15134 5 LLAIENLSVAFRQQQ---------TVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHG 75 (529)
T ss_pred eEEEeceEEEecCCC---------CceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECC
Confidence 378899988874210 1246999999999999999999999999999999999976531 2589999999
Q ss_pred ccCCcc------cc-cceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc---cccc
Q 000556 905 YPKKQE------TF-ARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL---IQSL 972 (1426)
Q Consensus 905 ~~~~~~------~~-~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~ 972 (1426)
.++... .. ++.+||++|++. +.+.+|+.|++.+...... ..+..+.+++++++++.+||.+. .++.
T Consensus 76 ~~i~~~~~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~ 153 (529)
T PRK15134 76 ESLLHASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHR--GMRREAARGEILNCLDRVGIRQAAKRLTDY 153 (529)
T ss_pred EecccCCHHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhhC
Confidence 876431 11 246899999974 5677899999876432211 22344456678999999999763 3555
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhhcceE
Q 000556 973 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDEL 1051 (1426)
Q Consensus 973 vg~~~~~~LSgGqrqRl~iA~~L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hq~~~~i~~~fD~v 1051 (1426)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++ |.|||+++|++. ++.+.+|++
T Consensus 154 -----~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~dri 227 (529)
T PRK15134 154 -----PHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLS-IVRKLADRV 227 (529)
T ss_pred -----CcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999999765 899999999986 577889999
Q ss_pred EEEecCcEEEEEcCC
Q 000556 1052 FLMKRGGQEIYVGPL 1066 (1426)
Q Consensus 1052 ~ll~~gg~~v~~G~~ 1066 (1426)
++|++ |++++.|+.
T Consensus 228 ~~l~~-G~i~~~g~~ 241 (529)
T PRK15134 228 AVMQN-GRCVEQNRA 241 (529)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 788888875
No 499
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-32 Score=309.62 Aligned_cols=210 Identities=21% Similarity=0.329 Sum_probs=163.9
Q ss_pred ceEeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCceeEEEEcCccCCC-C---CccceEEEecCCCCCC
Q 000556 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGE-F---VPERTAAYISQHDNHI 238 (1426)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~-~---~~~~~~~yv~Q~d~~~ 238 (1426)
+.+|+|+|+.|++||+++|+||||||||||+++|+|..++. ...+|+|.++|.++.. . ..++.++|++|++.++
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 95 (249)
T PRK14253 16 NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNPF 95 (249)
T ss_pred eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCcC
Confidence 45899999999999999999999999999999999998752 0138999999987642 1 1235699999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000556 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1426)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1426)
+ .||+||+.++....+...+ ......++..++.+|+.+...... +
T Consensus 96 ~-~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~l~~~~~~~~-~ 140 (249)
T PRK14253 96 P-MSIYENVAYGLRAQGIKDK---------------------------------KVLDEVVERSLRGAALWDEVKDRL-K 140 (249)
T ss_pred c-ccHHHHHHhHHHhcCCCch---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 7 8999999886432211000 001122445566677653221111 2
Q ss_pred cccccCChhHhhHHHHHHHHhcCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000556 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1426)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vilL 398 (1426)
..+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++++ + ++|+.++|+..++.+.+|++++|
T Consensus 141 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d~i~~l 217 (249)
T PRK14253 141 SHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISDRTAFF 217 (249)
T ss_pred cCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999999753 3 45555777788899999999999
Q ss_pred cCCeEEEecChhhH
Q 000556 399 SDGQIVYQGPRELV 412 (1426)
Q Consensus 399 ~~G~iv~~G~~~~~ 412 (1426)
++|++++.|+.+++
T Consensus 218 ~~G~i~~~g~~~~~ 231 (249)
T PRK14253 218 LMGELVEHDDTQVI 231 (249)
T ss_pred ECCEEEEeCCHHHH
Confidence 99999999998765
No 500
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=3.7e-32 Score=308.48 Aligned_cols=201 Identities=26% Similarity=0.387 Sum_probs=166.4
Q ss_pred EeecceEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCceeEEEEcCccCCCCCc---cceEEEecCCCCCCCCCCH
Q 000556 167 ILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMTV 243 (1426)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV 243 (1426)
+|+|+|+++++|++++|+||||||||||+++|+|.++ . +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 7999999999999999999999999999999999974 3 8999999998765432 2458999999888888999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCChHHHHHHHhhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000556 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1426)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1426)
+||+.+..... . .. .+....++.+++.+||.+..++.+ +.
T Consensus 87 ~~nl~~~~~~~-~-~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (248)
T PRK03695 87 FQYLTLHQPDK-T-RT---------------------------------EAVASALNEVAEALGLDDKLGRSV-----NQ 126 (248)
T ss_pred HHHHHhcCccC-C-Cc---------------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----cc
Confidence 99998753210 0 00 001224567889999987666544 46
Q ss_pred CChhHhhHHHHHHHHhc-------CCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhhcCCeEEEEEecCchhHHhhcCeEE
Q 000556 324 ISGGERKRVTTGEMMVG-------PALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1426)
Q Consensus 324 LSGGqrqRvsia~al~~-------~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~~~q~~~~~~~~fD~vi 396 (1426)
||||||||++||+||+. +|++++|||||+|||+.+...+.+.|+++.. . +++|+.++|+..++.+++|+|+
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQ-Q-GIAVVMSSHDLNHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 99999999999999997 6799999999999999999999999998864 3 4456667888888999999999
Q ss_pred EecCCeEEEecChhhHH
Q 000556 397 LLSDGQIVYQGPRELVL 413 (1426)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1426)
+|++|++++.|+.+++.
T Consensus 205 ~l~~G~i~~~g~~~~~~ 221 (248)
T PRK03695 205 LLKQGKLLASGRRDEVL 221 (248)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999987653
Done!