BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000558
(1423 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana
GN=SNL2 PE=1 SV=2
Length = 1367
Score = 1606 bits (4158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 845/1454 (58%), Positives = 1057/1454 (72%), Gaps = 119/1454 (8%)
Query: 1 MKRIRDDVYG-GSQFKRPLTTAPPRGESYGLSPQLPGTGAGGGGGAGGGGGAGAGGGSGV 59
MKRIRDD+Y GSQFKRPL ++ RGESY SP G
Sbjct: 1 MKRIRDDIYATGSQFKRPLGSS--RGESYEQSPITGGGSI-------------------- 38
Query: 60 GGGGGGMTAGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGV 119
G +QKLTT DALTYLKEVK+MFQDQR+KYDMFLEVMKDFKAQ+TDT+GV
Sbjct: 39 -------GEGGINTQKLTTDDALTYLKEVKEMFQDQRDKYDMFLEVMKDFKAQKTDTSGV 91
Query: 120 IARVKDLFKGHNNLIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHND 179
I+RVK+LFKGHNNLIFGFNTFLPKG+EITLD+ EAP KKTVEFEEAI+FVNKIK RF ++
Sbjct: 92 ISRVKELFKGHNNLIFGFNTFLPKGFEITLDDVEAPSKKTVEFEEAISFVNKIKTRFQHN 151
Query: 180 EHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPF 239
E VYKSFLEILNMYRK++KDI EVY+EV++LFEDH+DLLEEFTRFLPD+ A +
Sbjct: 152 ELVYKSFLEILNMYRKDNKDITEVYNEVSTLFEDHSDLLEEFTRFLPDSLAPHTEAQL-- 209
Query: 240 VRNSTQRGNERSAGIPPLRQMQMDKHRRRDRIATSHADRDLSVDRPEMDDEKLMIKMQKE 299
+R+ QR ++R +G P +R+M M+K RRR+R S DRD SVDR +++D+K M+KM ++
Sbjct: 210 LRSQAQRYDDRGSGPPLVRRMFMEKDRRRERTVASRGDRDHSVDRSDLNDDKSMVKMHRD 269
Query: 300 QRRRAEKENRDRRNRDQDDREIEHDNNRDFNLQRFPDKKKSIKKVEGFGANSSLASYDDK 359
QR+R +K+NR+RR+RD +D E E DN LQ F +K+KS +++EGF A S AS+ +K
Sbjct: 270 QRKRVDKDNRERRSRDLEDGEAEQDN-----LQHFSEKRKSSRRMEGFEAYSGPASHSEK 324
Query: 360 DALKITVAGIYNQGFIFCDKVKEKLCS-DDYQAFLKCLHIYSNGIIKRNDLQNLVTDLLG 418
+ LK +YNQ F+FC+KVKE+LCS DDYQAFLKCL+++SNGII+R DLQNLV+D+LG
Sbjct: 325 NNLK----SMYNQAFLFCEKVKERLCSQDDYQAFLKCLNMFSNGIIQRKDLQNLVSDVLG 380
Query: 419 KYMDLMDEFNHFFERCENIDGF--LAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVT 476
K+ DLMDEFN FFERCE+IDGF LAGVMSKKSL ++ ++SRSVK E+KDREHKR++E
Sbjct: 381 KFPDLMDEFNQFFERCESIDGFQHLAGVMSKKSLGSEENLSRSVKGEEKDREHKRDVEAA 440
Query: 477 KEKDRYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSV 536
KEK+R K+KY KSIQELDLS+C+RCTPSYRLLP DYPIPS R + GA VLNDHWVSV
Sbjct: 441 KEKERSKDKYMGKSIQELDLSDCERCTPSYRLLPPDYPIPSVRHRQKSGAAVLNDHWVSV 500
Query: 537 TSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLE 596
TSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESV S AK AEELLN I + KI+ E
Sbjct: 501 TSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVGSAAKSAEELLNIIIDKKISFE 560
Query: 597 TPFHLKDHFSALNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSD 656
F ++DHF+ALNLRCIERLYGDHGLDV D++RKNPA ALPV+LTRLKQKQ+EWTKCR
Sbjct: 561 GSFRIEDHFTALNLRCIERLYGDHGLDVTDLIRKNPAAALPVILTRLKQKQDEWTKCREG 620
Query: 657 FNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAA 716
FN VWA++YAKNHYKSLDHRSFYFKQQDSKNLS K+LV+E+K KE Q EDDV+ I+A
Sbjct: 621 FNVVWADVYAKNHYKSLDHRSFYFKQQDSKNLSAKALVSEVKDLKEKSQKEDDVVLSISA 680
Query: 717 GHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPS 776
G+RQP+IPHLEY Y D IHEDL+KLVQ+SCEE+CSTK+Q K +KLW FLE ML V
Sbjct: 681 GYRQPIIPHLEYDYLDRAIHEDLFKLVQFSCEEICSTKEQTGKVLKLWANFLELMLDVAP 740
Query: 777 RPSDVEGAEDAGKARH-----SGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTS 831
R + ED + +H SG+ N +S + ++ SRQ + NGD + S
Sbjct: 741 RAKGSDSVEDVVETQHQRAFTSGEANESSDAI----------SLVSRQLKFATNGDVHAS 790
Query: 832 TELNNLCRTALSNGDTITKENVLDSDRVYRDDLSCSALQLEKEQKNVDISD---KRSGII 888
+ ++ T L N D+ KEN+ D D +D +C+ EK QK+ +I + KRSG
Sbjct: 791 SGVSKHGETGLLNRDSSGKENLKDGDLANKDVATCA----EKPQKDQEIGNGAAKRSG-- 844
Query: 889 IQVAVGERVANSDASPAIGAENSHGRTGSEMMSASL----RPCDAAKDDLKHEANVNPVP 944
V ERVA S +S G EN++G+ GS S S +P +A ++ V
Sbjct: 845 ---DVDERVATSSSSFPSGVENNNGKVGSRDSSGSRGILSKPSEA----------IDKVD 891
Query: 945 PSEVTQGCDLAKPTLLENGALRDGAKGINYHEKSVGPTKIEKEEGELSPNGDFEEDNFGV 1004
+ TQG D+ + +L NG D +K + +++S GP+KIEKEEGELSP GD EDNF V
Sbjct: 892 SIQHTQGVDIGRIIVLGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGD-SEDNFVV 950
Query: 1005 YGDAAVKTLPKAKHGVESRQYQSKNEKGLQHQVVGGENDADADDEDSGNASVAGDDASGS 1064
Y D +K K +H VE+ ++ +AS AG+DASG+
Sbjct: 951 YEDRELKATAKTEHSVEAEGENDEDADDEDGD----------------DASEAGEDASGT 994
Query: 1065 ESAGDEYSREEHEEEEDVERDDVDGKAESEGEADGMADQHFVGGDCMSLPMSERFLLSVK 1124
ES GDE S++++ EE+ E D++DGKAESEGEA+GM + H + + P SER LLSVK
Sbjct: 995 ESIGDECSQDDNGVEEEGEHDEIDGKAESEGEAEGM-ESHLIEDKGL-FPSSERVLLSVK 1052
Query: 1125 PLAKFVPATSV--EERKDCRVFYGNDDFYVLFRLHQT------------LYERIQWAKMN 1170
PL+K + A ++ E++KD RVFYGNDDFYVLFRLH+ LYERI AK
Sbjct: 1053 PLSKHIAAAALVDEKKKDSRVFYGNDDFYVLFRLHRVSAIDSYDLLSHILYERILSAKTY 1112
Query: 1171 TTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDK 1230
+G+EMK R +K+ D YARFM AL++LL+GS +N+KFEDECRAIIGNQSYVLFTL+K
Sbjct: 1113 CSGSEMKLRNTKDTCSPDPYARFMNALFSLLNGSAENSKFEDECRAIIGNQSYVLFTLEK 1172
Query: 1231 LLYRLCKQLQTVAADEMDNKLIQLYEYEESRKPGKQIDSVYYENARVLLHEENIYRIQLS 1290
L+Y+L KQLQ V AD+MDNKL+QLYEYE SR+PG+ DSVYYENAR+LLHEENIYR++ S
Sbjct: 1173 LIYKLVKQLQAVVADDMDNKLLQLYEYENSRRPGRVFDSVYYENARILLHEENIYRLECS 1232
Query: 1291 SSPSRLSIQLMDNVIEKPEAFAVTMDPNFAAYLLNDFLSAFLGKKEPHAVVLRRNKRRFE 1350
SSPSRLSIQLMDN+IEKP+A+AV+M+P F +YL N+FLS GKKE +VL+RN R +
Sbjct: 1233 SSPSRLSIQLMDNIIEKPDAYAVSMEPTFTSYLQNEFLSNSSGKKELQDIVLQRNMRGYN 1292
Query: 1351 GLDELSAACMAMEGVQLVNGLECRIACNSYKITYVLDTEDVFYRRKRRRTYRARS-SHYN 1409
GLD+L+ AC AMEGVQ++NGLEC+++C+SYKI+YVLDTED F+R+K+++ S + +
Sbjct: 1293 GLDDLAVACKAMEGVQVINGLECKMSCSSYKISYVLDTEDFFHRKKKQKKSNNLSLAKLS 1352
Query: 1410 QARVLRFHRFLSAS 1423
Q R+ RFH+FLSAS
Sbjct: 1353 QNRIARFHKFLSAS 1366
>sp|Q9SRH9|SNL1_ARATH Paired amphipathic helix protein Sin3-like 1 OS=Arabidopsis thaliana
GN=SNL1 PE=1 SV=2
Length = 1372
Score = 1568 bits (4060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 846/1438 (58%), Positives = 1041/1438 (72%), Gaps = 82/1438 (5%)
Query: 1 MKRIRDDVYG-GSQFKRPLTTAPPRGESYGLSPQLPGTGAGGGGGAGGGGGAGAGGGSGV 59
MKRIRDDVY GSQF+RPL ++ RG+ G SP G+G GG V
Sbjct: 1 MKRIRDDVYASGSQFRRPLGSS--RGQLCGQSPV---------HGSGDTEEEEEGGSRRV 49
Query: 60 GGGGGGMTAGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGV 119
SQKLTT+DAL+YL+EVK+MFQDQREKYD FLEVMKDFKAQRTDT GV
Sbjct: 50 -------------SQKLTTNDALSYLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGV 96
Query: 120 IARVKDLFKGHNNLIFGFNTFLPKGYEITL-DEDEAPPKKTVEFEEAITFVNKIKKRFHN 178
IARVK+LFKGHNNLI+GFNTFLPKGYEITL +ED+A PKKTVEFE+AI FVNKIK RF +
Sbjct: 97 IARVKELFKGHNNLIYGFNTFLPKGYEITLIEEDDALPKKTVEFEQAINFVNKIKMRFKH 156
Query: 179 DEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDT--SATSLSHN 236
DEHVYKSFLEILNMYRKE+K+I EVY+EV+ LF+ H DLLE+FTRFLP + S ++ H+
Sbjct: 157 DEHVYKSFLEILNMYRKENKEIKEVYNEVSILFQGHLDLLEQFTRFLPASLPSHSAAQHS 216
Query: 237 IPFVRNSTQRGNERSAGIPPLRQMQMDKHRRRDRIATSHADRDLSVDRPEMDDEKLMIKM 296
R+ Q+ ++R + P L QMQ++K RRR+R D SV+R +++D+K M+K+
Sbjct: 217 ----RSQAQQYSDRGSDPPLLHQMQVEKERRRERAVALRGD--YSVERYDLNDDKTMVKI 270
Query: 297 QKEQRRRAEKENRDRRNRDQDDREIEHDNNRDFNLQRFPDKKKSIKKVEGFGANSSLASY 356
Q+EQR+R +KENR RR RD DDRE DN L FP+K+KS ++ E A S AS+
Sbjct: 271 QREQRKRLDKENRARRGRDLDDREAGQDN-----LHHFPEKRKSSRRAEALEAYSGSASH 325
Query: 357 DDKDALKITVAGIYNQGFIFCDKVKEKLCS-DDYQAFLKCLHIYSNGIIKRNDLQNLVTD 415
+KD LK +Y Q F+FC+KVK++LCS DDYQ FLKCL+I+SNGII+R DLQNLV+D
Sbjct: 326 SEKDNLK----SMYKQAFVFCEKVKDRLCSQDDYQTFLKCLNIFSNGIIQRKDLQNLVSD 381
Query: 416 LLGKYMDLMDEFNHFFERCENI-DGF--LAGVMSKKSLCNDGHVSRSVKIEDKDREHKRE 472
LLGK+ DLMDEFN FFERCE+I DGF LAGVMSKK ++ +SR +K+E+K+ EHK E
Sbjct: 382 LLGKFPDLMDEFNQFFERCESITDGFQRLAGVMSKKLFSSEEQLSRPMKVEEKESEHKPE 441
Query: 473 MEVTKEKDRYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDH 532
+E KE ++ K++Y KSIQELDLS+C+ CTPSYRLLP DYPIP ASQRSELGA+VLNDH
Sbjct: 442 LEAVKETEQCKKEYMGKSIQELDLSDCECCTPSYRLLPADYPIPIASQRSELGAEVLNDH 501
Query: 533 WVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENK 592
WVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSS A+ AE LLN I E K
Sbjct: 502 WVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSAARSAESLLNIITEKK 561
Query: 593 ITLETPFHLKDHFSALNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTK 652
I+ F ++DHF+ALNLRCIERLYGDHGLDV+DIL KNPA ALPV+LTRLKQKQ EW K
Sbjct: 562 ISFSGSFRIEDHFTALNLRCIERLYGDHGLDVIDILNKNPATALPVILTRLKQKQGEWKK 621
Query: 653 CRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLF 712
CR DF+KVWA +YAKNHYKSLDHRSFYFKQQDSKNLS KSL+AEIK+ KE Q +DDVL
Sbjct: 622 CRDDFDKVWANVYAKNHYKSLDHRSFYFKQQDSKNLSAKSLLAEIKELKEKSQNDDDVLL 681
Query: 713 VIAAGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPML 772
I+AG+RQP+ P+LEY Y + IHED++K+VQ+SCEE+CSTK+QL+K ++LW FLE +L
Sbjct: 682 SISAGYRQPINPNLEYEYLNRAIHEDMFKVVQFSCEELCSTKEQLSKVLRLWENFLEAVL 741
Query: 773 SVPSRPSDVEGAEDAG-KARHSGKNNSASSMVESDGSPGPD-GTVNSRQPISSGNGDENT 830
VP R + ED + N+S S E+ S G D + SR+ S+ NGDEN+
Sbjct: 742 GVPPRAKGTDLVEDVVINPKTLDVNHSTSPNGEAAVSSGGDTARLASRKLKSAANGDENS 801
Query: 831 STELNNLCRTALSNGDTITKENVLDSDRVYRDDLSCSALQLEKEQKNVDISDKRSGIIIQ 890
S+ L N D+ KEN+ D + RD ++CSA++ +KEQ+ + ++KR G I
Sbjct: 802 SSGTFKHG-IGLLNKDSTGKENLEDVEIANRDGVACSAVKPQKEQETGNEAEKRFGKPIP 860
Query: 891 VAVGERVANSDASPAIGAENSHGRTGSEMMSAS----LRPCDAAKDDLKHEANVNPVPPS 946
+ + ER A S S GAEN+H G E++ + +P D D+ H +V+ +
Sbjct: 861 MDISERAAISSISIPSGAENNHCVVGKEVLPGAHEIQAKPSDTLT-DIHH--DVDSIETV 917
Query: 947 EVTQGCDLAKPTLLENGALRDGAKGINYHEKSVGPTKIEKEEGELSPNGDFEEDNFGVYG 1006
TQG D+ +L NG D +KG + GP++ EKEEGELSPNGDF EDNFGVY
Sbjct: 918 HSTQGGDVGNSIVLANGLRSDSSKGTRNSDDPEGPSRNEKEEGELSPNGDF-EDNFGVYK 976
Query: 1007 DAAVKTLPKAKHGVESRQYQSKNEKGLQHQVVGGENDADADDEDSGNASVAGDDASGSES 1066
D HGV+S + + EN+ DADD DS NAS +ASG+ES
Sbjct: 977 D----------HGVKSTSKPENSAEAEVEADAEVENEDDADDVDSENAS----EASGTES 1022
Query: 1067 AGDEYSREEHEEEEDVERDDVDGKAESEGEADGMADQHFVGGDCMSLPMSERFLLSVKPL 1126
GD S++E EEE+ E D++DGKAESEGEA+GM D H + G+ LP SER LLSV+PL
Sbjct: 1023 GGDVCSQDEDREEENGEHDEIDGKAESEGEAEGM-DPHLLEGESELLPQSERVLLSVRPL 1081
Query: 1127 AKFVPATSVEER-KDCRVFYGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKEAS 1185
+K V A +ER KD +VFYGNDDFYVLFRLHQ LYERI +AK N +G E+K + K+ +
Sbjct: 1082 SKHVAAVLCDERTKDLQVFYGNDDFYVLFRLHQILYERILYAKRNCSGGELKSKNLKDTN 1141
Query: 1186 CSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAAD 1245
D YARFM LY LLDGS +N KFEDECRAIIGNQSYVLFTLDKL+YRL KQLQ + AD
Sbjct: 1142 AGDPYARFMRVLYGLLDGSAENTKFEDECRAIIGNQSYVLFTLDKLIYRLVKQLQAIVAD 1201
Query: 1246 EMDNKLIQLYEYEESRKPGKQIDSVYYENARVLLHEENIYRIQLSSSPSRLSIQLMDNVI 1305
EMDNKL+QLYEYE+SRKPG+ IDSVYYEN RVL+HEENIYR++ SS PSRLSIQLMDN+I
Sbjct: 1202 EMDNKLLQLYEYEKSRKPGRVIDSVYYENVRVLVHEENIYRLECSSLPSRLSIQLMDNII 1261
Query: 1306 EKPEAFAVTMDPNFAAYLLNDFLSAFLGKKEP-HAVVLRRNKRRFEGLDELSAACMAMEG 1364
EKPEA+AV+MDP FA+Y+ + LS GKKE H +VL+RN GL +L C AMEG
Sbjct: 1262 EKPEAYAVSMDPTFASYMQTELLSVSSGKKEEGHDIVLQRN---LTGLYDL---CKAMEG 1315
Query: 1365 VQLVNGLECRIACNSYKITYVLDTEDVFYRRKRRRTYRARSSHYNQARVLRFHRFLSA 1422
V++VNGLEC+++C+SYKI YVLDTED F+R+K+++ + N+ RV RFHRFLSA
Sbjct: 1316 VEVVNGLECKMSCSSYKIAYVLDTEDYFHRKKKKKKTE-QLWQRNKVRVERFHRFLSA 1372
>sp|O04539|SNL4_ARATH Paired amphipathic helix protein Sin3-like 4 OS=Arabidopsis thaliana
GN=SNL4 PE=3 SV=3
Length = 1326
Score = 1224 bits (3167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 695/1367 (50%), Positives = 899/1367 (65%), Gaps = 112/1367 (8%)
Query: 68 AGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLF 127
G ++QKLTT+DAL YLK VKD FQD+R+KYD FLEVMKDFKAQR DT GVI RVK+LF
Sbjct: 2 VGGSSAQKLTTNDALAYLKAVKDKFQDKRDKYDEFLEVMKDFKAQRVDTTGVILRVKELF 61
Query: 128 KGHNNLIFGFNTFLPKGYEITL---DEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYK 184
KG+ LI GFNTFLPKG+EITL D+ A PKK VEFEEAI+FVNKIK RF D+ VYK
Sbjct: 62 KGNRELILGFNTFLPKGFEITLRPEDDQPAAPKKPVEFEEAISFVNKIKTRFQGDDRVYK 121
Query: 185 SFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNST 244
SFL+ILNMYRKE+K I EVY EVA LF DH DLL EFT FLPDTSAT+ + N +
Sbjct: 122 SFLDILNMYRKENKSITEVYHEVAILFRDHHDLLGEFTHFLPDTSATAST-------NDS 174
Query: 245 QRGNERSAGI---PPLRQMQMDKHRRRDRIATSHADRDLSVDRPEMDDEKLMIKMQKEQR 301
+ R GI P +RQ+ +DK +DRI TSH +R L + ++D E+ ++K KE+
Sbjct: 175 VKVPVRDRGIKSLPTMRQIDLDK---KDRIITSHPNRALKTENMDVDHERSLLKDSKEEV 231
Query: 302 RRAEKENRDRRNRDQDD-REIEHDNNRDFNLQRFPDKKKSIKKVEGFGANSSLASYDDKD 360
RR +K+N +RD+ D R ++HD++++ F KKK I+K + S A DK
Sbjct: 232 RRIDKKNDFMDDRDRKDYRGLDHDSHKE---HFFNSKKKLIRKDDDSAEMSDQAREGDKF 288
Query: 361 ALKITVAGIYN-----QGFIFCDKVKEKLCSDDYQAFLKCLHIYSNGIIKRNDLQNLVTD 415
+ I + Y+ Q F D+VK KL + D Q FL+CL++YS II + +LQ+LV+D
Sbjct: 289 SGAIPSSSTYDEKGHSQELAFVDRVKAKLDTADNQEFLRCLNLYSKEIISQPELQSLVSD 348
Query: 416 LLGKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKRE-ME 474
L+G Y DLMD F F +C+ DG L+G++SKKSL ++G + K DKD + +RE +E
Sbjct: 349 LIGVYPDLMDAFKVFLAQCDKNDGLLSGIVSKKSLWSEGKCPQPTKSLDKDTDREREKIE 408
Query: 475 VTKEKDRYKEKY--------YAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGA 526
+E+DR KE+ +AK I ELDLSNC++CTPSYR LP +YPIP ASQ+ E+G+
Sbjct: 409 RYRERDREKERLEKVAASQKWAKPISELDLSNCEQCTPSYRRLPKNYPIPIASQKMEIGS 468
Query: 527 QVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLN 586
QVLNDHWVSVTSGSEDYSFKHMR+NQYEESLF+CEDDRFELDMLLESV S R EELL
Sbjct: 469 QVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFKCEDDRFELDMLLESVISATNRVEELLA 528
Query: 587 SINENKITLETPFHLKDHFSALNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQK 646
IN N++ +TP ++DH +ALNLRCIERLY DHGLDV+D+L+KN +ALPV+LTRLKQK
Sbjct: 529 KINSNELKTDTPICIEDHLTALNLRCIERLYSDHGLDVLDLLKKNAYLALPVILTRLKQK 588
Query: 647 QEEWTKCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQT 706
QEEW +CR++FNKVWA+IY KN+++SLDHRSFYFKQQDSKNLSTK+L+AEIK+ E K+
Sbjct: 589 QEEWARCRTEFNKVWADIYTKNYHRSLDHRSFYFKQQDSKNLSTKALLAEIKEISEKKRG 648
Query: 707 EDDVLFVIAAGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTT 766
EDD L +AAG+R+ + ++ + Y D ++HEDLY+L++YSC EMCST +QL+K MK+WT
Sbjct: 649 EDDALLALAAGNRRTISSNMSFDYPDPDLHEDLYQLIKYSCGEMCST-EQLDKVMKVWTE 707
Query: 767 FLEPMLSVPSRPSDVEGAEDAGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGNG 826
FLEP+ VPSRP E EDA K+ + + + ++ +G+ NS + S+G
Sbjct: 708 FLEPIFGVPSRPQGAEDREDAVKSTNHDREDQEDAVSPQNGA----SIANSMR--SNGPR 761
Query: 827 DENTSTELNNLCRTALSNGDTITKENVLDSDRVYRDDLSCSALQLEKEQKNVDISDKRSG 886
N S N R A +T D+ LSC Q +K KN+ D+R+
Sbjct: 762 KVNES----NQVRQASELDKDVTSSKTSDA------LLSCDNTQNDKMPKNLTTPDERAE 811
Query: 887 IIIQVAVGERVANSDASPAIGAENSHGRTGSEMMSASLRPCDAAKDDLKHEANVNPVPPS 946
V++ ER NS+A P G S + A L +N NP P
Sbjct: 812 TKQAVSI-ERAHNSNALPLDGLLPQRNGKISSLSVAGL-------------SNSNPKPA- 856
Query: 947 EVTQGCDLAKPTLLENGALRDGAKGI----NYHEKSVGPTKIEKEEGELSPNGDFEEDNF 1002
+T G + KP + + G + E G K+E+EEGELSP GDFEEDN+
Sbjct: 857 -LTSGTEELKPNYVNGPRVEIGDNPVIPNGTVAEWFAGEAKVEREEGELSPTGDFEEDNY 915
Query: 1003 GVYGDAAVKTLPKAKHGVESRQYQSKNEKGLQHQVVGGENDADADDEDSGNASVAGDDAS 1062
V+G+ ++ L K+K ENDA ADD + +S D S
Sbjct: 916 AVHGENDMEALSKSK-----------------------ENDATADDASAPRSS----DGS 948
Query: 1063 GSESAGDEYSREEHEEEEDVER-DDVD-GKAESEGEA-DGMADQH-FVGGDCMSLPMSER 1118
G+ S + S + + ED R DD+D K ESEGEA +GM+D H GD L +S +
Sbjct: 949 GNTSHNGDVSGTDSGDGEDCYREDDIDHNKVESEGEAEEGMSDGHDDTEGDMPVLSISVK 1008
Query: 1119 FLLSVKPLAKFVPATSVEE-----RKDCRVFYGNDDFYVLFRLHQTLYERIQWAKMNTTG 1173
LL VKPLAK+VP ++ RK+ +VFYGND FYVLFRLHQ LY+RI AK+N++
Sbjct: 1009 NLLHVKPLAKYVPPALYDKDNDDSRKNSQVFYGNDSFYVLFRLHQILYDRILSAKINSSS 1068
Query: 1174 AEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLY 1233
+ K +TS + +D YAR M ALYNLLDG+ DN+KFED+CRAIIG QSYVLFTLDKL+Y
Sbjct: 1069 PDRKWKTSNPTNPADSYARIMDALYNLLDGTSDNSKFEDDCRAIIGTQSYVLFTLDKLIY 1128
Query: 1234 RLCKQLQTVAADEMDNKLIQLYEYEESRKPGKQIDSVYYENARVLLHEENIYRIQL-SSS 1292
+L K LQ VAADEMDNKL QLY YE+SRKP K +D+VYYENA VLL +E+IYRI+ S+
Sbjct: 1129 KLIKHLQAVAADEMDNKLQQLYAYEKSRKPEKFLDAVYYENALVLLPDEDIYRIECEQST 1188
Query: 1293 PSRLSIQLMDNVIEKPEAFAVTMDPNFAAYLLNDFLSAFLGKKEPHAVVLRRNKRRFEGL 1352
PS+LSIQL+D +KP+ +++MDP FAAYL N FLS KE + L+RNKR+ G
Sbjct: 1189 PSKLSIQLLDYGHDKPDVTSISMDPTFAAYLHNVFLSYQPNAKENPRIYLKRNKRKNGGD 1248
Query: 1353 DELSAACMAMEGVQLVNGLECRIACNSYKITYVLDTEDVFYRRKRRR 1399
DEL C E V+++NGLEC+I C+S K++YVLDTEDV +R KRR+
Sbjct: 1249 DEL---CTTDE-VKIINGLECKITCSSSKVSYVLDTEDVLHRAKRRK 1291
>sp|O48686|SNL3_ARATH Paired amphipathic helix protein Sin3-like 3 OS=Arabidopsis thaliana
GN=SNL3 PE=1 SV=3
Length = 1330
Score = 1194 bits (3089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/1368 (50%), Positives = 890/1368 (65%), Gaps = 99/1368 (7%)
Query: 68 AGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLF 127
G G++QKLTT+DAL YLK VKD FQDQR KYD FLEVMK+FK+QR DTAGVI RVK+LF
Sbjct: 2 VGGGSAQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKELF 61
Query: 128 KGHNNLIFGFNTFLPKGYEITLD-EDEAPP-KKTVEFEEAITFVNKIKKRFHNDEHVYKS 185
KGH LI GFNTFLPKG+EITL ED PP KK VEFEEAI+FVNKIK RF D+ VYKS
Sbjct: 62 KGHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKIKTRFQGDDRVYKS 121
Query: 186 FLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQ 245
FL+ILNMYR++ K I EVY EVA LF DH+DLL EFT FLPDTSAT+ +IP V+ S +
Sbjct: 122 FLDILNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSATA---SIPSVKTSVR 178
Query: 246 RGNERSAGIPPLRQMQMDKHRRRDRIATSHADRDLSVDRPEMDDEKLMIKMQKEQRRRAE 305
ER + ++DRI T H D D + + D E+ + K KE R
Sbjct: 179 ---ERGVSLAD----------KKDRIITPHPDHDYGTEHIDQDRERPIKKENKEHMRGTN 225
Query: 306 KENRDRRNRD-QDDREIEHDNNRDFNLQRFPDKKKSIKKVEGF-GANSSLASYDDKDALK 363
KEN R RD + + E N+ L D I GA S ++YD+K A+K
Sbjct: 226 KENEHRDARDFEPHSKKEQFLNKKQKLHIRGDDPAEISNQSKLSGAVPSSSTYDEKGAMK 285
Query: 364 ITVAGIYNQGFIFCDKVKEKLCSDDYQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDL 423
Y+Q D+VKEKL + +YQ FL+CL+++S II R +LQ+LV +L+G Y DL
Sbjct: 286 S-----YSQDLAIVDRVKEKLNASEYQEFLRCLNLFSKEIISRPELQSLVGNLIGVYPDL 340
Query: 424 MDEFNHFFERCENIDGFLAGVMSKKS----LCNDGHVSRSVKIEDKDREHKREMEVTKEK 479
MD F F +CE +G L+G+++K L +G + D+D+EHKR+ + +++
Sbjct: 341 MDSFIEFLVQCEKNEGLLSGILTKSKSTYLLQGEGKYPQPSLDNDRDQEHKRD-DGLRDR 399
Query: 480 DRYKEKY--------YAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLND 531
D KE+ +AK I ELDLSNC++CTPSYRLLP +YPI ASQ++E+G VLND
Sbjct: 400 DHEKERLEKAAANLKWAKPISELDLSNCEQCTPSYRLLPKNYPISIASQKTEIGKLVLND 459
Query: 532 HWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINEN 591
HWVSVTSGSEDYSF HMR+NQYEESLF+CEDDRFELDMLLESV+ST K EELL IN N
Sbjct: 460 HWVSVTSGSEDYSFSHMRKNQYEESLFKCEDDRFELDMLLESVNSTTKHVEELLTKINSN 519
Query: 592 KITLETPFHLKDHFSALNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWT 651
++ +P ++DH +ALNLRCIERLYGDHGLDVMD+L+KN ++ALPV+LTRLKQKQEEW
Sbjct: 520 ELKTNSPIRVEDHLTALNLRCIERLYGDHGLDVMDVLKKNVSLALPVILTRLKQKQEEWA 579
Query: 652 KCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVL 711
+CRSDF+KVWAEIYAKN+YKSLDHRSFYFKQQDSK LS K+L+AEIK+ E K+ EDD L
Sbjct: 580 RCRSDFDKVWAEIYAKNYYKSLDHRSFYFKQQDSKKLSMKALLAEIKEITEKKR-EDDSL 638
Query: 712 FVIAAGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPM 771
AAG+R + P LE+ Y D ++HEDLY+L++YSC EMCST +QL+K MK+WTTF+E +
Sbjct: 639 LAFAAGNRLSISPDLEFDYPDHDLHEDLYQLIKYSCAEMCST-EQLDKVMKIWTTFVEQI 697
Query: 772 LSVPSRPSDVEGAEDAGKARHSGKNNSASSMVESDGSPGPDGTV-NSRQPISSGNGDENT 830
VPSRP E ED K+ + + +SS ES+GSP +V +SR+ SS +E++
Sbjct: 698 FGVPSRPQGAEDQEDVVKSMNQNVKSGSSSAGESEGSPHNYASVADSRRSKSSRKANEHS 757
Query: 831 STELNNLCRTALSNGDTITKENVLDSDRVYRDDLSCSALQLEKEQKNVDISDKRSGIIIQ 890
L +T+ S D D C Q EK KNV SD++
Sbjct: 758 -----QLGQTSNSERDGAAGRT---------SDALCETAQHEKMLKNVVTSDEKPESKQA 803
Query: 891 VAVGERVANSDASPAIG-AENSHGRTGSEMMSA----SLRPCDAAKDDLKHEANVNPVPP 945
V++ ER +S A G + S+G + M+ +L+P +L+ + N P
Sbjct: 804 VSI-ERAHDSTALAVDGLLDQSNGGSSIVHMTGHCNNNLKPVTCGT-ELELKMNDGNGPK 861
Query: 946 SEVTQGCDLAKPTLLENGALRDGAKGINYHEKSVGPTKIEKEEGELSPNGDFEEDNFGVY 1005
EV LL NG A I ++ G +K+E+EEGELSPNGDFEEDNF VY
Sbjct: 862 LEV------GNKKLLTNGI----AVEITSDQEMAGTSKVEREEGELSPNGDFEEDNFAVY 911
Query: 1006 GDAAVKTLPKAKHGVESRQYQSKNEKGLQHQV-VGGENDADADD------EDSGNASVAG 1058
+T KA + ++ +G + ENDA+ D+ EDS N G
Sbjct: 912 AKTDFETFSKANDSTGNNISGDRSREGEPSCLETRAENDAEGDENAARSSEDSRNEYENG 971
Query: 1059 DDASGSESAGDEYSREEHEEEEDVERDDVDGKAESEGEADGMADQHFVGGDCMSLPMSER 1118
D SG+ES G E + E+D+ D + K ESEGEA+ MAD H + +LP+S R
Sbjct: 972 -DVSGTESGGGE------DPEDDL---DNNNKGESEGEAECMADAHDAEENGSALPVSAR 1021
Query: 1119 FLLSVKPLAKFVP-ATSVEER-----KDCRVFYGNDDFYVLFRLHQTLYERIQWAKMNTT 1172
FLL VKPL K+VP A ++ ++ K+ +VFYGND FYVLFRLH+ LYERI AK+N++
Sbjct: 1022 FLLHVKPLVKYVPSAIALHDKDKDSLKNSQVFYGNDSFYVLFRLHRILYERILSAKVNSS 1081
Query: 1173 GAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLL 1232
E K RTS + +D YARFMTALYNLLDG+ DNAKFED+CRAIIG QSY+LFTLDKL+
Sbjct: 1082 SPEGKWRTSNTKNPTDSYARFMTALYNLLDGTSDNAKFEDDCRAIIGTQSYILFTLDKLI 1141
Query: 1233 YRLCKQLQTVAADEMDNKLIQLYEYEESRKPGKQIDSVYYENARVLLHEENIYRIQLS-S 1291
++ K LQ V ADEMDNKL+QLY YE+SR+P D+VYY+N RVLL +ENIYRI+ S
Sbjct: 1142 HKFIKHLQVVVADEMDNKLLQLYFYEKSRRPETIFDAVYYDNTRVLLPDENIYRIECRLS 1201
Query: 1292 SPSRLSIQLMDNVIEKPEAFAVTMDPNFAAYLLNDFLSAFLGKKEPHAVVLRRNKRRFEG 1351
+P++LSIQLM N ++KP+ +V++DP FAAYL NDFLS +E + L RNKR+
Sbjct: 1202 TPAKLSIQLMCNGLDKPDVTSVSIDPTFAAYLHNDFLSIQPNAREDRRIYLNRNKRKVCR 1261
Query: 1352 LDELSAACMAMEGVQLVNGLECRIACNSYKITYVLDTEDVFYRRKRRR 1399
DE + + V++ NGLEC+IAC S K++YVL+TED+ R K+RR
Sbjct: 1262 EDE---QLYSTDEVKIKNGLECKIACGSSKVSYVLETEDLLVRVKKRR 1306
>sp|Q9XIE1|SNL5_ARATH Paired amphipathic helix protein Sin3-like 5 OS=Arabidopsis
thaliana GN=SNL5 PE=2 SV=3
Length = 1162
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 270/648 (41%), Positives = 364/648 (56%), Gaps = 110/648 (16%)
Query: 376 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVT-------DLLGKYMDLM-- 424
F +++K + DD Y+ FL L++Y N++ VT DLLG+++ +
Sbjct: 133 FVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHEDLLGEFVHFLPD 192
Query: 425 ------------------------------------------DEFNHFFERCENIDGFLA 442
DE+ ++ E+ D L
Sbjct: 193 FRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTELSDQREDGDENLV 252
Query: 443 GVMSKKSLCNDGHVSRSVKIED--------KDREHKREMEVTKEKDRYKEKYYAKSIQEL 494
S +SL N G K+ED + H+R+ ++ +K+ + AK+I EL
Sbjct: 253 A-YSAESLANQGQWPGYPKVEDTEGIQIYESNGGHERDPDIGSQKNLLSTNHMAKAINEL 311
Query: 495 DLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYE 554
DL++C +CTPSYR LPDDYPI S R+ LG +VLNDHWVSVTSGSEDYSFKHMR+NQYE
Sbjct: 312 DLTDCAQCTPSYRRLPDDYPIQIPSYRNSLGEKVLNDHWVSVTSGSEDYSFKHMRKNQYE 371
Query: 555 ESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFSALNLRCIE 614
ESLFRCEDDRFELDMLLESVS+ KR E LL IN N I++ETP +++H S LNLRCIE
Sbjct: 372 ESLFRCEDDRFELDMLLESVSAAIKRVESLLEKINNNTISIETPICIREHLSELNLRCIE 431
Query: 615 RLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNHYKSLD 674
RLYGD+GLDVMD L+KN IALPV+LTRLKQKQEEW +CR+DF KVWAE+YAKNH+KSLD
Sbjct: 432 RLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQEEWARCRADFRKVWAEVYAKNHHKSLD 491
Query: 675 HRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVIPHLEYGYSDSN 734
HRSFYFKQQDSKNLSTK LVAEIK E K E D+L IA G + P +E+ Y+D+
Sbjct: 492 HRSFYFKQQDSKNLSTKGLVAEIKDISERKHKE-DLLRAIAVGTKPSFTPDVEFIYTDTK 550
Query: 735 IHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPSRPSDVEGAEDAGKARHSG 794
+H DLYKL++Y CEE+C+T +Q +K MKLW TFLEPM VPSR +E +D K +
Sbjct: 551 VHTDLYKLIKYYCEEICAT-EQSDKVMKLWVTFLEPMFGVPSRSETIETMKDVAKIEDNQ 609
Query: 795 KNNSASSMVESDGSPG----------PDGTVNSRQPISSGN----------GDENTSTEL 834
+++ AS V+ + G P N P+ G+ G+ +L
Sbjct: 610 EHHDASEAVKENTCDGSMASNLKPLTPPKMPNKENPMIQGSSFAQDLPVNTGESIQQDKL 669
Query: 835 NNLCRTALSNGDT-----------ITKENVLDSDRVYRDDLSCSALQLEK---------- 873
+++ A++N D+ + E V + RV D+S ++E+
Sbjct: 670 HDVA--AITNEDSQPSKLVSTRNDLIMEGVENRSRV--SDVSMGGHKVEREEGELSPTES 725
Query: 874 -EQKNVDISDKRSGIIIQVAVGERVANSDASPAIGAENSHGRTGSEMM 920
EQ+N ++ + +Q ++N+D P GA + T S +
Sbjct: 726 CEQENFEVYKENGLEPVQKLPDNEISNTDREPKEGACGTEAVTRSNAL 773
Score = 352 bits (902), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 202/434 (46%), Positives = 269/434 (61%), Gaps = 30/434 (6%)
Query: 978 SVGPTKIEKEEGELSPNGDFEEDNFGVYGDAAVKTLPKAKHGVESRQYQSKNEKGLQHQV 1037
S+G K+E+EEGELSP E++NF VY + ++ + K S + E +
Sbjct: 707 SMGGHKVEREEGELSPTESCEQENFEVYKENGLEPVQKLPDNEISNTDREPKEGACGTEA 766
Query: 1038 VGGENDADADDEDSGNASVA-GDD------ASGSESAGDEYSREEHEEEEDVERDDVDGK 1090
V N DD++ ++ GD+ S S+ G S EEH+
Sbjct: 767 VTRSNALPEDDDNKITQKLSEGDENASKFIVSASKFGGQVSSDEEHK------------G 814
Query: 1091 AESEGEADGMADQHFVGGDCMSLPMSERFLLSVKPLAKFVP----ATSVEERKDCRVFYG 1146
AESE EA GM + + G D SER+L VKPLAK VP A+ + R D RVFYG
Sbjct: 815 AESENEAGGMVNSN-EGEDGSFFTFSERYLQPVKPLAKHVPGTLQASECDTRNDSRVFYG 873
Query: 1147 NDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSID 1206
ND YVLFRLHQ LYERIQ AK+++ ++ + +++ +D Y RFM ALYNLLDGS D
Sbjct: 874 NDSLYVLFRLHQMLYERIQSAKIHSE----RKWKAPDSTSTDSYTRFMEALYNLLDGSSD 929
Query: 1207 NAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESRKPGKQ 1266
N KFEDECRAIIG QSYVLFTLDKL+ + K L VAADE D KL+QLY YE RKPG+
Sbjct: 930 NTKFEDECRAIIGAQSYVLFTLDKLVQKFVKHLHAVAADETDTKLLQLYAYENYRKPGRF 989
Query: 1267 IDSVYYENARVLLHEENIYRIQLSSSPSRLSIQLMDNVIEKPEAFAVTMDPNFAAYLLND 1326
D VY+ENAR LLH++NIYRI+ SS+ +RL IQLM++ ++PE AVT++P FA YL ND
Sbjct: 990 FDIVYHENARALLHDQNIYRIEYSSAQTRLGIQLMNSWNDQPEVTAVTVEPGFANYLQND 1049
Query: 1327 FLSAFLGKKEPHAVVLRRNKRRFEGLDELS-AACMAMEGVQLVNGLECRIACNSYKITYV 1385
FLS F+ +E + L+RNK + G E S A+EG+ ++N +EC+IAC+S+K+ Y
Sbjct: 1050 FLS-FVSDEEKPGLFLKRNKAKLSGPGEESLGMSRALEGLNIINEVECKIACSSFKVKYE 1108
Query: 1386 LDTEDVFYRRKRRR 1399
T D+ YRRK+++
Sbjct: 1109 PHTADLLYRRKQKK 1122
Score = 226 bits (577), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 136/271 (50%), Positives = 166/271 (61%), Gaps = 39/271 (14%)
Query: 1 MKRIRDDVYGGSQFKRPLTTAPPRGESYGLSPQLPGTGAGGGGGAGGGGGAGAGGGSGVG 60
MKR+R++VY Q + P T RGE+
Sbjct: 1 MKRVREEVYVEPQMRGP--TVSSRGET--------------------------------- 25
Query: 61 GGGGGMTAGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVI 120
G +G GT+ LTT DALTYLK VKDMFQD +EKY+ FL VMKDFKAQR DT GVI
Sbjct: 26 NGRPSTISGGGTTGGLTTVDALTYLKAVKDMFQDNKEKYETFLGVMKDFKAQRVDTNGVI 85
Query: 121 ARVKDLFKGHNNLIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDE 180
ARVKDLFKG+++L+ GFNTFLPKGY+ITL ++ PKK V+F+ AI FVN+IK RF D+
Sbjct: 86 ARVKDLFKGYDDLLLGFNTFLPKGYKITLQPEDEKPKKPVDFQVAIEFVNRIKARFGGDD 145
Query: 181 HVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIP-F 239
YK FL+ILNMYRKE K INEVY EV LF+DH DLL EF FLPD S+S N P F
Sbjct: 146 RAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHEDLLGEFVHFLPDFRG-SVSVNDPLF 204
Query: 240 VRNSTQRGNERSAGIPPLRQMQMDKHRRRDR 270
RN+ R +R++ P + +K +R R
Sbjct: 205 QRNTIPR--DRNSTFPGMHPKHFEKKIKRSR 233
>sp|Q9XIK6|SNL6_ARATH Paired amphipathic helix protein Sin3-like 6 OS=Arabidopsis
thaliana GN=SNL6 PE=3 SV=2
Length = 1173
Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/338 (59%), Positives = 241/338 (71%), Gaps = 7/338 (2%)
Query: 485 KYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYS 544
KY I ELDLS C +CTPSYRLLP DY + S R+ LG + LNDH VSVTSGSEDYS
Sbjct: 336 KYVGTPINELDLSECTQCTPSYRLLPKDYAVEIPSYRNTLGKKTLNDHLVSVTSGSEDYS 395
Query: 545 FKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDH 604
F HMR+NQYEESLFRCEDDR+E+DMLL SVSS K+ E LL +N N I++++ ++ H
Sbjct: 396 FSHMRKNQYEESLFRCEDDRYEMDMLLGSVSSAIKQVEILLEKMNNNTISVDSTICIEKH 455
Query: 605 FSALNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEI 664
SA+NLRCIERLYGD+GLDVMD+L+KN ALPV+LTRLKQKQEEW +C SDF KVWAE+
Sbjct: 456 LSAMNLRCIERLYGDNGLDVMDLLKKNMHSALPVILTRLKQKQEEWARCHSDFQKVWAEV 515
Query: 665 YAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVIP 724
YAKNH+KSLDHRSFYFKQQDSKNLSTK LVAE+K E K E D+L IA P
Sbjct: 516 YAKNHHKSLDHRSFYFKQQDSKNLSTKCLVAEVKDISEKKHQE-DLLQAIAVRVMPLFTP 574
Query: 725 HLEYGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPSRPSDVEGA 784
LE+ Y D+ IHEDLY L++Y CEE+C+T +Q +K MKLW TFLEP+ + SR D
Sbjct: 575 DLEFNYCDTQIHEDLYLLIKYYCEEICAT-EQSDKVMKLWITFLEPIFGILSRSQDNLAL 633
Query: 785 EDAGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPIS 822
ED K +++ + A V+ S N + PIS
Sbjct: 634 EDVSKLKNNRELQDACLAVKETASGS-----NRKHPIS 666
Score = 334 bits (856), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 213/516 (41%), Positives = 290/516 (56%), Gaps = 32/516 (6%)
Query: 912 HGRTGSEMMSASLRPCDAAKDDLKHEANVNPVPPSEVTQGCDLAKPTLLENGALRDGAKG 971
G + E +SA+++ A D L+ +A + +EV Q P + + D
Sbjct: 678 QGSSSREDVSANIKVKTAQPDKLQDDAAMT----NEVIQSSKFVSPK--NDQIMEDEG-- 729
Query: 972 INYHEKSVGPTKIEKEEGELSPNGDFEEDNFGVYGDAAVKTLPKAKHGVESRQYQSKNEK 1031
N+ + K E EEGELSP E+ NF V G A K L K V S + + +K
Sbjct: 730 -NHMVNAASVEKHELEEGELSPTASREQSNFEVNGQNAFKPLQKVTDNVRSNKDKQSCDK 788
Query: 1032 GLQHQVVGGENDADADDEDSGNA-SVAGDDASGSESAGDEYSREEHEEEEDVERDDVDGK 1090
G +N A+D+ N ++ ++ + SE HEE V + +G+
Sbjct: 789 K------GAKNKTRAEDDKQENCHKLSENNKTASEMLVSGTKVSCHEENNRVM--NCNGR 840
Query: 1091 AESEGEADGMADQHFVGGDCMSLPMSERFLLSVKPLAKFVP----ATSVEERKDCRVFYG 1146
GE MA+ + G+ S SERFL +VKP+AK + A+ + D +VFYG
Sbjct: 841 GSVAGE---MANGN--QGEDGSFAFSERFLQTVKPVAKHLSWPLQASETCSQNDSQVFYG 895
Query: 1147 NDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSID 1206
ND +YVLFRLHQ LYERIQ AK ++ K+ + + + D Y RFM ALYNLLDGSID
Sbjct: 896 NDSYYVLFRLHQMLYERIQTAKKHSE----KKWKAADNTTPDSYPRFMDALYNLLDGSID 951
Query: 1207 NAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESRKPGKQ 1266
N KFEDECRAI G QSYVLFTLDKL+ + K L +VA+DE D KL+QL+ YE RKPGK
Sbjct: 952 NTKFEDECRAIFGAQSYVLFTLDKLVQKFVKHLHSVASDETDTKLLQLHAYENYRKPGKF 1011
Query: 1267 IDSVYYENARVLLHEENIYRIQLSSSPSRLSIQLMDNVIEKPEAFAVTMDPNFAAYLLND 1326
D VY+ENA LLHE NIYRI+ SS +RLSIQLM++ + E V M+P FA YL N
Sbjct: 1012 FDLVYHENACALLHEANIYRIRYSSEGTRLSIQLMNSGNNQLEVMGVAMEPAFADYLQNK 1071
Query: 1327 FLSAFLGKKEPHAVVLRRNKRRFEGLDELSAACMAMEGVQLVNGLECRIACNSYKITYVL 1386
L + + +E H + L RNK++F LDE +AME + ++N +ECR+AC+S K+ YV
Sbjct: 1072 CLKS-VNDEENHGLFLNRNKKKFTSLDESRGMPVAMERLNIINEMECRMACSSSKVKYVA 1130
Query: 1387 DTEDVFYRRKRRRTYRARSSHYNQARVLRFHRFLSA 1422
+T D+ YR K+ + S Q R+ RFH L+
Sbjct: 1131 NTSDLLYRSKQGKPNSRVSEILKQRRISRFHIMLNC 1166
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 126/171 (73%), Gaps = 3/171 (1%)
Query: 71 GTSQKLT-TSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKG 129
G + KL T DALTYLK VKD+F D +EKY+ FLE+MK+FKAQ DT GVI R+K LFKG
Sbjct: 74 GETNKLPRTIDALTYLKAVKDIFHDNKEKYESFLELMKEFKAQTIDTNGVIERIKVLFKG 133
Query: 130 HNNLIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEI 189
+ +L+ GFNTFLPKGY+ITL +E PK V+F++AI FV KIK RF +DEH YK FL+I
Sbjct: 134 YRDLLLGFNTFLPKGYKITLLPEEEKPKIRVDFKDAIGFVTKIKTRFGDDEHAYKRFLDI 193
Query: 190 LNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDT--SATSLSHNIP 238
LN+YRKE K I+EVY EV LF+ H DLL EF FLP+ SA S + +P
Sbjct: 194 LNLYRKEKKSISEVYEEVTMLFKGHEDLLMEFVNFLPNCPESAPSTKNAVP 244
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 80 DALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNT 139
DA+ ++ ++K F D Y FL+++ ++ ++ + V V LFKGH +L+ F
Sbjct: 168 DAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLFKGHEDLLMEFVN 227
Query: 140 FLPKGYEITLDEDEAPPK 157
FLP E A P+
Sbjct: 228 FLPNCPESAPSTKNAVPR 245
>sp|Q96ST3|SIN3A_HUMAN Paired amphipathic helix protein Sin3a OS=Homo sapiens GN=SIN3A
PE=1 SV=2
Length = 1273
Score = 216 bits (551), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 202/377 (53%), Gaps = 55/377 (14%)
Query: 375 IFCDKVKEKL-CSDDYQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFER 433
+F DKV++ L ++ Y+ FL+CL I++ +I R +L LV+ LGK+ +L + F +F
Sbjct: 465 LFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL-- 522
Query: 434 CENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKEKYYAKSIQE 493
G+ SV +E T K+R E E
Sbjct: 523 -----GY----------------KESVHLE------------TYPKERATEGI----AME 545
Query: 494 LDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQY 553
+D ++C+R SYR LP Y P + R+ L +VLND WVS S SED +F ++ QY
Sbjct: 546 IDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQY 605
Query: 554 EESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFS----ALN 609
EE ++RCED+RFELD++LE+ +T + E + ++ + F L + ++
Sbjct: 606 EEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIH 665
Query: 610 LRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNH 669
+ ++R+Y D D++D LRKNP+IA+P++L RLK K+EEW + + FNKVW E K +
Sbjct: 666 RKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYY 725
Query: 670 YKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQ---TEDDVLFVIAAGHRQPVIPHL 726
KSLDH+ FKQ D+K L +KSL+ EI+ + +Q TE++ AG PV PHL
Sbjct: 726 LKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEEN------AG--VPVGPHL 777
Query: 727 EYGYSDSNIHEDLYKLV 743
Y D I ED L+
Sbjct: 778 SLAYEDKQILEDAAALI 794
Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 153/343 (44%), Gaps = 78/343 (22%)
Query: 1143 VFYGNDDFYVLFRLHQTLYER---------------------------IQWAKMNTTGAE 1175
+FY N+++Y+ RLHQ L R I+ K ++ +
Sbjct: 885 LFYVNNNWYIFMRLHQILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQ 944
Query: 1176 MKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRL 1235
++ + + D Y F+ + +LLDG+ID++++ED R + +Y+ FT+DKL+ +
Sbjct: 945 LRLKEPMDVDVEDYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSI 1004
Query: 1236 CKQLQTVAADEMDNKLIQLYEYEESR-KPGKQ---------IDSVYYENARVLLHEENIY 1285
+QLQ + +DE+ ++ LY E + G Q ++S Y A L+ +EN +
Sbjct: 1005 VRQLQHIVSDEICVQVTDLYLAENNNGATGGQLNTQNSRSLLESTYQRKAEQLMSDENCF 1064
Query: 1286 RIQL--SSSPSRLSIQLMDNVIEKPEAFAVTMDPNFAAYLLNDFLSAFLGK--------- 1334
++ S +L+I+L+D E + DP A +D++ ++
Sbjct: 1065 KLMFIQSQGQVQLTIELLDTEEENSD------DP-VEAERWSDYVERYMNSDTTSPELRE 1117
Query: 1335 ---KEPHAVVLRRNKRRF------------EGLDELSAACMAMEGVQLVNGLECRIACNS 1379
++P V L RN RR EG + S ME V ++ LECR NS
Sbjct: 1118 HLAQKP--VFLPRNLRRIRKCQRGREQQEKEGKEGNSKK--TMENVDSLDKLECRFKLNS 1173
Query: 1380 YKITYVLDTEDVFYRRKRRRTYRARSSHYNQARVLRFHRFLSA 1422
YK+ YV+ +ED YRR RA SH ++ R H+ A
Sbjct: 1174 YKMVYVIKSEDYMYRRT--ALLRAHQSHERVSK--RLHQRFQA 1212
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 88/198 (44%), Gaps = 45/198 (22%)
Query: 1 MKRIRDD----VYGGSQFKRP------------LTTAPP------------RGESYGLSP 32
MKR DD VY Q + P L APP G Y ++P
Sbjct: 1 MKRRLDDQESPVYAAQQRRIPGSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP 60
Query: 33 QLPGTGAGGGGGAGGGGGAGAGGG----SGVGGGGGGMTA-------------GMGTSQK 75
+ G+ G A + V GG + G Q+
Sbjct: 61 SYQVSAMPQSSGSHGPAIAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQR 120
Query: 76 LTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIF 135
L DAL+YL +VK F Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH +LI
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180
Query: 136 GFNTFLPKGYEITLDEDE 153
GFNTFLP GY+I + ++
Sbjct: 181 GFNTFLPPGYKIEVQTND 198
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 16/103 (15%)
Query: 147 ITLDEDEAPP---KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDI--- 200
+T+ AP + VEF AI +VNKIK RF +YK+FLEIL+ Y+KE ++
Sbjct: 286 VTISLGTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 345
Query: 201 ----------NEVYSEVASLFEDHADLLEEFTRFLPDTSATSL 233
EVY++VA LF++ DLL EF +FLPD +++ L
Sbjct: 346 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVL 388
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 154 APPKKTVE---------FEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVY 204
APP V+ E+A+++++++K +F + VY FL+I+ ++ + D V
Sbjct: 106 APPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVI 165
Query: 205 SEVASLFEDHADLLEEFTRFLP 226
S V+ LF+ H DL+ F FLP
Sbjct: 166 SRVSQLFKGHPDLIMGFNTFLP 187
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 65 GMTAGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDT--AG---- 118
G + +Q + + A+ Y+ ++K+ FQ Q + Y FLE++ ++ ++ + AG
Sbjct: 291 GTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYT 350
Query: 119 -------VIARVKDLFKGHNNLIFGFNTFLP 142
V A+V LFK +L+ F FLP
Sbjct: 351 PALTEQEVYAQVARLFKNQEDLLSEFGQFLP 381
>sp|Q60520|SIN3A_MOUSE Paired amphipathic helix protein Sin3a OS=Mus musculus GN=Sin3a
PE=1 SV=3
Length = 1274
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 200/377 (53%), Gaps = 55/377 (14%)
Query: 375 IFCDKVKEKL-CSDDYQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFER 433
+F DKV++ L ++ Y+ FL+CL I++ +I R +L LV+ LGK+ +L + F +F
Sbjct: 466 LFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL-- 523
Query: 434 CENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKEKYYAKSIQE 493
G+ SV +E +E E E
Sbjct: 524 -----GY----------------KESVHLESFPKERATE----------------GIAME 546
Query: 494 LDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQY 553
+D ++C+R SYR LP Y P + R+ L +VLND WVS S SED +F ++ QY
Sbjct: 547 IDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQY 606
Query: 554 EESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFS----ALN 609
EE ++RCED+RFELD++LE+ +T + E + ++ + F L + ++
Sbjct: 607 EEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIH 666
Query: 610 LRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNH 669
+ ++R+Y D D++D LRKNP+IA+P++L RLK K+EEW + + FNKVW E K +
Sbjct: 667 RKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYY 726
Query: 670 YKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQ---TEDDVLFVIAAGHRQPVIPHL 726
KSLDH+ FKQ D+K L +KSL+ EI+ + +Q TE++ AG PV PHL
Sbjct: 727 LKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEEN------AG--VPVGPHL 778
Query: 727 EYGYSDSNIHEDLYKLV 743
Y D I ED L+
Sbjct: 779 SLAYEDKQILEDAAALI 795
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 153/337 (45%), Gaps = 66/337 (19%)
Query: 1143 VFYGNDDFYVLFRLHQTLYER---------------------------IQWAKMNTTGAE 1175
+FY N+++Y+ RLHQ L R I+ K ++ +
Sbjct: 886 LFYVNNNWYIFMRLHQILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQ 945
Query: 1176 MKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRL 1235
++ + + D Y F+ + +LLDG+ID++++ED R + +Y+ FT+DKL+ +
Sbjct: 946 LRLKEPMDVDVEDYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSI 1005
Query: 1236 CKQLQTVAADEMDNKLIQLYEYE----------ESRKPGKQIDSVYYENARVLLHEENIY 1285
+QLQ + +DE+ ++ LY E S+ ++S Y A L+ +EN +
Sbjct: 1006 VRQLQHIVSDEVCVQVTDLYLAENNNGATGGQLNSQTSRSLLESAYQRKAEQLMSDENCF 1065
Query: 1286 RIQL--SSSPSRLSIQLMDNVIE------KPEAFAVTMDPNFAAYLLNDFLSAFLGKKEP 1337
++ S +L+++L+D E + E ++ ++ ++ + L L +K
Sbjct: 1066 KLMFIQSQGQVQLTVELLDTEEENSDDPVEAERWSDYVERYMSSDTTSPELREHLAQK-- 1123
Query: 1338 HAVVLRRNKRRF------------EGLDELSAACMAMEGVQLVNGLECRIACNSYKITYV 1385
V L RN RR EG + S ME V+ ++ LECR NSYK+ YV
Sbjct: 1124 -PVFLPRNLRRIRKCQRGREQQEKEGKEGNSKK--TMENVESLDKLECRFKLNSYKMVYV 1180
Query: 1386 LDTEDVFYRRKRRRTYRARSSHYNQARVLRFHRFLSA 1422
+ +ED YRR RA SH ++ R H+ A
Sbjct: 1181 IKSEDYMYRRT--ALLRAHQSHERVSK--RLHQRFQA 1213
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 83/181 (45%), Gaps = 29/181 (16%)
Query: 2 KRIRDDVYGGSQFKRPLTTAPP------------RGESYGLSPQLPGTGAGGGGGAGGGG 49
+RI S R L APP G Y ++P + G+ G
Sbjct: 18 RRIPGSTEAFSHQHRVLAPAPPVYEAVSETMQSATGIQYSVAPNYQVSAVPQSSGSHGPA 77
Query: 50 GAGAGGG----SGVGGGGGGMTA-------------GMGTSQKLTTSDALTYLKEVKDMF 92
A + V GG + G Q+L DAL+YL +VK F
Sbjct: 78 IAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQRLKVEDALSYLDQVKLQF 137
Query: 93 QDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTFLPKGYEITLDED 152
Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH +LI GFNTFLP GY+I + +
Sbjct: 138 GSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTN 197
Query: 153 E 153
+
Sbjct: 198 D 198
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 16/103 (15%)
Query: 147 ITLDEDEAPP---KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDI--- 200
+T+ AP + VEF AI +VNKIK RF +YK+FLEIL+ Y+KE ++
Sbjct: 286 VTISLGTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 345
Query: 201 ----------NEVYSEVASLFEDHADLLEEFTRFLPDTSATSL 233
EVY++VA LF++ DLL EF +FLPD +++ L
Sbjct: 346 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVL 388
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 154 APPKKTVE---------FEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVY 204
APP V+ E+A+++++++K +F + VY FL+I+ ++ + D V
Sbjct: 106 APPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVI 165
Query: 205 SEVASLFEDHADLLEEFTRFLP 226
S V+ LF+ H DL+ F FLP
Sbjct: 166 SRVSQLFKGHPDLIMGFNTFLP 187
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 65 GMTAGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDT--AG---- 118
G + +Q + + A+ Y+ ++K+ FQ Q + Y FLE++ ++ ++ + AG
Sbjct: 291 GTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYT 350
Query: 119 -------VIARVKDLFKGHNNLIFGFNTFLP 142
V A+V LFK +L+ F FLP
Sbjct: 351 PALTEQEVYAQVARLFKNQEDLLSEFGQFLP 381
>sp|Q62141|SIN3B_MOUSE Paired amphipathic helix protein Sin3b OS=Mus musculus GN=Sin3b
PE=1 SV=2
Length = 1098
Score = 207 bits (526), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 199/392 (50%), Gaps = 54/392 (13%)
Query: 362 LKITVAGIYN--QGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLG 418
L I G Y Q F F DKV+ L S + Y+ FL+C+ +++ ++ ++L LV+ LG
Sbjct: 285 LSIAAVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLG 344
Query: 419 KYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKE 478
K+ +L +F F E A MS +S DG +SR
Sbjct: 345 KFPELFAQFKSFLGVKELS---FAPPMSDRS--GDG-ISR-------------------- 378
Query: 479 KDRYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTS 538
E+D ++C+R SYR LP Y P S R+ + +VLND WVS S
Sbjct: 379 --------------EIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPS 424
Query: 539 GSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETP 598
SED +F ++ YEE L RCED+RFELD++LE+ +T + E + ++ +
Sbjct: 425 WSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEK 484
Query: 599 FHLKDHFS----ALNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCR 654
L D + R I R+YGD +V++ L++NPA A+PV+L RLK K+EEW + +
Sbjct: 485 LRLDDCLGGTSEVIQRRAIHRIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQ 544
Query: 655 SDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVI 714
FNK+W E Y K + KSLDH++ FKQ D+K L +KSL+ EI+ + Q +
Sbjct: 545 QGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQH------ 598
Query: 715 AAGHRQPVI-PHLEYGYSDSNIHEDLYKLVQY 745
+ G P PHL + Y D I ED L+ Y
Sbjct: 599 SEGRSAPSSEPHLIFVYEDRQILEDAAALISY 630
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 116/232 (50%), Gaps = 48/232 (20%)
Query: 68 AGMGTSQKLTT--SDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKD 125
+G G +KL DALTYL +VK F Y+ FLE+MK+FK+Q DT GVI RV
Sbjct: 22 SGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQ 81
Query: 126 LFKGHNNLIFGFNTFLPKGYEITL-----------------------------------D 150
LF H +LI GFN FLP GY I + D
Sbjct: 82 LFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQDNSHSHGDCGEDFKQMSYKED 141
Query: 151 EDEAPPKK-TVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDIN-------- 201
+ P + +VEF AI++VNKIK RF + +Y+SFLEIL+ Y+KE
Sbjct: 142 RGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMS 201
Query: 202 --EVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQRGNERS 251
EV++EVA+LF DLL EF +FLP+ + + N NS Q+ E+S
Sbjct: 202 EEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGSCEMNSGQKNEEKS 253
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 143/334 (42%), Gaps = 69/334 (20%)
Query: 1143 VFYGNDDFYVLFRLHQTLYERI---------------------------QWAKMNTTGAE 1175
+F+ N+++Y RLHQTL R+ + K E
Sbjct: 711 LFFANNNWYFFLRLHQTLCARLLKIYRQAQKQLLEHRREQEREQLLCEGRREKAADPAME 770
Query: 1176 MKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRL 1235
++ + E + Y F+ + +LL+GSID ++ED R + +Y+ FT+DKL+ +
Sbjct: 771 LRLKQPSEVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYIGFTMDKLVQNI 830
Query: 1236 CKQLQTVAADEMDNKLIQLYEYEESR-KPGKQIDS---------VYYENARVLLHEENIY 1285
+QL + +D++ K+++LY E+ R G + S Y A + +EN +
Sbjct: 831 ARQLHHLVSDDVCLKVVELYLNEQQRGAAGGNLSSRCVRAARETSYQWKAERCMADENCF 890
Query: 1286 RIQLSSSPSR--LSIQLMDNVIEKPEAFAVTMDPNFAAYLLNDFLSAFLGKKEPHA---- 1339
++ + ++I+L+D A T DP +L ++ ++G + +
Sbjct: 891 KVMFLQRRGQVIMTIELLDT------EEAQTEDPVEVQHLAR-YVEQYVGSEGASSSSTE 943
Query: 1340 ------VVLRRNKRRFEGLD---------ELSAACMAMEGVQLVNGLECRIACNSYKITY 1384
V L+RN ++F E ++ + GV+ ++CR ++K+ +
Sbjct: 944 GFLLKPVFLQRNLKKFRRWQCEQVRAMRGEAKSSWKRLMGVESACDVDCRFRLGTHKMVF 1003
Query: 1385 VLDTEDVFYRRKRRRTYRARSSHYNQARVLRFHR 1418
++++ED Y RR R+ +LR HR
Sbjct: 1004 IVNSEDYMY----RRGTLCRAKQVQPLVLLRHHR 1033
>sp|O75182|SIN3B_HUMAN Paired amphipathic helix protein Sin3b OS=Homo sapiens GN=SIN3B
PE=1 SV=2
Length = 1162
Score = 193 bits (490), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 199/424 (46%), Gaps = 86/424 (20%)
Query: 362 LKITVAGIYN--QGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLG 418
L I G Y Q F F DKV+ L S + Y+ FL+C+ +++ ++ ++L LV+ LG
Sbjct: 294 LSIAAVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLG 353
Query: 419 KYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKE 478
K+ +L +F F E A MS +S DG +SR
Sbjct: 354 KFPELFAQFKSFLGVKELS---FAPPMSDRS--GDG-ISR-------------------- 387
Query: 479 KDRYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSEL-------------- 524
E+D ++C+R SYR LP Y P S R+ +
Sbjct: 388 --------------EIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKELDHWTLLQGSW 433
Query: 525 ------------------GAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFE 566
A VLND WVS S SED +F ++ YEE L RCED+RFE
Sbjct: 434 TDDYCMSKFKNTCWIPGYSAGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFE 493
Query: 567 LDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFS----ALNLRCIERLYGDHGL 622
LD++LE+ +T + E + ++ + F L D + R I R+YGD
Sbjct: 494 LDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAP 553
Query: 623 DVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQ 682
++++ L+KNP A+PV+L RLK K+EEW + + FNK+W E Y K + KSLDH++ FKQ
Sbjct: 554 EIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQ 613
Query: 683 QDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVI-PHLEYGYSDSNIHEDLYK 741
D+K L +KSL+ EI+ + Q + + G P PHL + Y D I ED
Sbjct: 614 NDTKALRSKSLLNEIESVYDEHQEQH------SEGRSAPSSEPHLIFVYEDRQILEDAAA 667
Query: 742 LVQY 745
L+ Y
Sbjct: 668 LISY 671
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 118/236 (50%), Gaps = 48/236 (20%)
Query: 59 VGGGGGGMTAGMGTSQ-KLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTA 117
+ G G + G + + DALTYL +VK F Y+ FLE+MK+FK+Q DT
Sbjct: 21 LSGARWGRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTP 80
Query: 118 GVIARVKDLFKGHNNLIFGFNTFLPKGYEITLDED------------------------- 152
GVI RV LF H +LI GFN FLP GY I + ++
Sbjct: 81 GVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDF 140
Query: 153 --EAPPKK----------TVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDI 200
+ P K+ +VEF AI++VNKIK RF + +Y+SFLEIL+ Y+KE +
Sbjct: 141 KQQVPYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNT 200
Query: 201 N----------EVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQR 246
EV++EVA+LF DLL EF +FLP+ + + N P +S Q+
Sbjct: 201 RGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQK 256
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 140/312 (44%), Gaps = 66/312 (21%)
Query: 1143 VFYGNDDFYVLFRLHQTLYERI---------------------------QWAKMNTTGAE 1175
+F+ N+++Y RLHQTL R+ + K + E
Sbjct: 774 LFFANNNWYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKEREKLLCEGRREKGSDPAME 833
Query: 1176 MKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRL 1235
++ + E + Y F+ + +LL+GSID ++ED R + +YV FT+DKL+ +
Sbjct: 834 LRLKQPSEVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLVQNI 893
Query: 1236 CKQLQTVAADEMDNKLIQLYEYEESR-KPGKQIDS---------VYYENARVLLHEENIY 1285
+QL + +D++ K+++LY E+ R G + S Y A + +EN +
Sbjct: 894 ARQLHHLVSDDVCLKVVELYLNEKKRGAAGGNLSSRCVRAARETSYQWKAERCMADENCF 953
Query: 1286 RIQLSSSPSR--LSIQLMDNVIEKPEAFAVTMDPNFAAYLLNDFLSAFLGKKEPHA---- 1339
++ + ++I+L+D A T DP +L ++ ++G + +
Sbjct: 954 KVMFLQRKGQVIMTIELLDT------EEAQTEDPVEVQHLAR-YVEQYVGTEGASSSPTE 1006
Query: 1340 ------VVLRRN----KRRFEGLD------ELSAACMAMEGVQLVNGLECRIACNSYKIT 1383
V L+RN +RR++ E ++ + GV+ ++CR +++K+
Sbjct: 1007 GFLLKPVFLQRNLKKFRRRWQSEQARALRGEARSSWKRLVGVESACDVDCRFKLSTHKMV 1066
Query: 1384 YVLDTEDVFYRR 1395
+++++ED YRR
Sbjct: 1067 FIVNSEDYMYRR 1078
>sp|P22579|SIN3_YEAST Transcriptional regulatory protein SIN3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SIN3 PE=1 SV=2
Length = 1536
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 179/379 (47%), Gaps = 57/379 (15%)
Query: 371 NQGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNH 429
N+ F +K K + + Y FLK L++YS I+ +DL V LG +L F +
Sbjct: 663 NEEVTFFEKAKRYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDFYLGSNKELFTWFKN 722
Query: 430 FFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKEKYYAK 489
F G+ ++ IE+ + EK R
Sbjct: 723 FV----------------------GYQEKTKCIEN----------IVHEKHR-------- 742
Query: 490 SIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVS-VTSGSEDYSFKHM 548
LDL C+ PSY+ LP S R ++ +VLND WV SED F
Sbjct: 743 ----LDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGHPVWASEDSGFIAH 798
Query: 549 RRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSI---NEN-KITLETPFHLKDH 604
R+NQYEE+LF+ E++R E D +ES T + E ++N I EN K + P L
Sbjct: 799 RKNQYEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENEKANFKLPPGLGHT 858
Query: 605 FSALNLRCIERLY-GDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAE 663
+ + I ++Y + G +++D L ++PA+ PV+L RLKQK EEW + + ++NKVW E
Sbjct: 859 SMTIYKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEWRRAQREWNKVWRE 918
Query: 664 IYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVI 723
+ K +KSLDH FKQ D K L+TK L++EI K + QT + ++ Q
Sbjct: 919 LEQKVFFKSLDHLGLTFKQADKKLLTTKQLISEISSIKVD-QTNKKIHWLTPKPKSQ--- 974
Query: 724 PHLEYGYSDSNIHEDLYKL 742
L++ + D NI D+ L
Sbjct: 975 --LDFDFPDKNIFYDILCL 991
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 57/73 (78%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLE 219
VEF +AI++VNKIK RF + +YK FLEIL Y++E K INEVY++V LF++ DLLE
Sbjct: 406 VEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLE 465
Query: 220 EFTRFLPDTSATS 232
+F +FLPD+SA++
Sbjct: 466 DFKKFLPDSSASA 478
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%)
Query: 76 LTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIF 135
L DAL+YL++VK F + + Y++FL++MKDFK+Q DT GVI RV LF+G+ LI
Sbjct: 219 LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 278
Query: 136 GFNTFLPKGYEI 147
GFNTFLP+GY I
Sbjct: 279 GFNTFLPQGYRI 290
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 118/294 (40%), Gaps = 60/294 (20%)
Query: 1144 FYGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKEASC----------------- 1186
+ N + Y+ FR T+YER+ K +M R +KE +
Sbjct: 1138 LFANTNIYIFFRHWTTIYERLLEIK------QMNERVTKEINTRSTVTFAKDLDLLSSQL 1191
Query: 1187 ---------SDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCK 1237
D Y + + L++G +++ FE+ R N+++ L+T+DK+ L K
Sbjct: 1192 SEMGLDFVGEDAYKQVLRLSRRLINGDLEHQWFEESLRQAYNNKAFKLYTIDKVTQSLVK 1251
Query: 1238 QLQTVAADEMDNKLIQLYEYEESRKPGKQIDSVYYENARVLLH---EENIYRIQLSSSPS 1294
T+ D +++ L+ + + D + Y +V H EN++RI+
Sbjct: 1252 HAHTLMTDAKTAEIMALFVKDRNASTTSAKDQIIYR-LQVRSHMSNTENMFRIEFDKRTL 1310
Query: 1295 RLSIQLM---DNVIEKPEAFAVTMDPNFAAYLLNDFLSAFLGKKEPHAVVLRRNKRRFEG 1351
+SIQ + D +++P+A D + Y + + + PH K +
Sbjct: 1311 HVSIQYIALDDLTLKEPKA-----DEDKWKYYVTSYALPHPTEGIPH------EKLKIPF 1359
Query: 1352 LDELSAACMAMEGVQL----------VNGLECRIACNSYKITYVLDTEDVFYRR 1395
L+ L ++G ++ V+ L+ +I +Y++ + DVF R+
Sbjct: 1360 LERLIEFGQDIDGTEVDEEFSPEGISVSTLKIKIQPITYQLHIENGSYDVFTRK 1413
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 79 SDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFN 138
S A++Y+ ++K F DQ + Y FLE+++ ++ ++ V A+V LF+ +L+ F
Sbjct: 409 SQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDFK 468
Query: 139 TFLP 142
FLP
Sbjct: 469 KFLP 472
Score = 41.6 bits (96), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 141 LPKGYEITLDEDEAP--PKKT------VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNM 192
+P EI LD P P+ T + E +TF K KR+ ++H+Y FL+ILN+
Sbjct: 633 IPVRPEIDLDPSIVPVVPEPTEPIENNISLNEEVTFFEK-AKRYIGNKHLYTEFLKILNL 691
Query: 193 YRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNI 237
Y ++ D++++ +V + +L F F+ T NI
Sbjct: 692 YSQDILDLDDLVEKVDFYLGSNKELFTWFKNFVGYQEKTKCIENI 736
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 40/69 (57%)
Query: 158 KTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADL 217
+ + ++A++++ ++K +F + +Y FL+I+ ++ + D V V++LF + L
Sbjct: 217 RPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPIL 276
Query: 218 LEEFTRFLP 226
++ F FLP
Sbjct: 277 IQGFNTFLP 285
>sp|Q09750|PST1_SCHPO Paired amphipathic helix protein pst1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pst1 PE=1 SV=1
Length = 1522
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 142/255 (55%), Gaps = 13/255 (5%)
Query: 494 LDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSV-TSGSEDYSFKHMRRNQ 552
+DL+ C+ C PSYRLLP + S R +L +LND WVS T SED F R+NQ
Sbjct: 588 VDLTQCKSCGPSYRLLPKIELLLPCSGRDDLCWTILNDAWVSFPTLASEDSGFIAHRKNQ 647
Query: 553 YEESLFRCEDDRFELDMLLES----VSSTAKRAEELLNSINENKITLETPFHLKDHFSAL 608
+EE+L + E++R+E D + + + A+++L K P +L ++
Sbjct: 648 FEENLHKLEEERYEYDRHIGANMRFIELLQIHADKMLKMSEVEKANWTLPSNLGGKSVSI 707
Query: 609 NLRCIERLYG-DHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAK 667
+ I+++YG +H +++ L+KNP++ +P++L RLK+K EW ++ +N++W +I K
Sbjct: 708 YHKVIKKVYGKEHAQQIIENLQKNPSVTIPIVLERLKKKDREWRSLQNHWNELWHDIEEK 767
Query: 668 NHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVIPHLE 727
N Y+SLDH+ FK D K+ + K L++E++ + ++ E ++ G P L
Sbjct: 768 NFYRSLDHQGVSFKSVDKKSTTPKFLISELRNLAQQQKVE------LSEGKVTPSHQFL- 820
Query: 728 YGYSDSNIHEDLYKL 742
+ Y D NI D+ +L
Sbjct: 821 FSYKDPNIITDIARL 835
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 52/76 (68%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
++L +DAL+YL VK F + E Y+ FL++MK+FK+Q +T VI RV LF G+ NL
Sbjct: 178 RQLNVTDALSYLDLVKLQFHQEPEIYNEFLDIMKEFKSQAIETPEVITRVSKLFAGYPNL 237
Query: 134 IFGFNTFLPKGYEITL 149
I GFNTFLP GY I +
Sbjct: 238 IQGFNTFLPPGYSIEI 253
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 157 KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHAD 216
K+ + ++AI FVN +K RF + Y SFL+IL Y+ + + I VY +V+ LF + D
Sbjct: 344 KQAADLDQAINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLVYFQVSQLFAEAPD 403
Query: 217 LLEEFTRFLPDTSATS 232
LLEEF RFLPD S +
Sbjct: 404 LLEEFKRFLPDVSVNA 419
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 34/283 (12%)
Query: 1144 FYGNDDFYVLFRLHQTLYERIQW--------------AKMNTTGAEM-------KRRTSK 1182
+GN Y FRL TLY R++ K N E+ +R
Sbjct: 1004 LFGNMSLYCFFRLFHTLYSRLEEIKNLEQMAYSKQHDVKSNPVAVELGLVRHPSERLGFA 1063
Query: 1183 EASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTV 1242
+ +Y + + L++G ID FED R + G ++ L+T++KL+ + KQL +V
Sbjct: 1064 LPTADTVYEQAIQLCERLMEGEIDQNGFEDALRCLYGIHAFRLYTVEKLVTSIIKQLHSV 1123
Query: 1243 AADEMDNKLIQLYEYEESRKPGKQIDSVYY--ENARVLLHEENIYRIQLSSSPSRLSIQL 1300
+ ++ YE + ++ + Y + +EN+ I +S + +I+L
Sbjct: 1124 TTNRRLAQVFMYYEKDRVQRRTSPRQQIMYRIQTETAFGPDENLCCIDWNSQTRQSAIRL 1183
Query: 1301 MDNVIEKPEAFAVTMDPNFAAYLLNDFL--SAFLGKKEPHAVV--LRRNKRRFEGL--DE 1354
M E + D Y + ++ S G H + LR+ EG DE
Sbjct: 1184 MGR--EDLTMGTLKSDAEKWCYYIGSYIMSSPTEGILPEHVRIPFLRKCLPSDEGNEDDE 1241
Query: 1355 LSAACMAMEGVQ---LVNGLECRIACNSYKITYVLDTEDVFYR 1394
S+ + + L +GL I N+ KI Y TEDVF R
Sbjct: 1242 SSSVVKSANAIITSFLESGLALTIPINTVKIRYENGTEDVFAR 1284
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 44/75 (58%)
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTR 223
+A+++++ +K +FH + +Y FL+I+ ++ + + EV + V+ LF + +L++ F
Sbjct: 184 DALSYLDLVKLQFHQEPEIYNEFLDIMKEFKSQAIETPEVITRVSKLFAGYPNLIQGFNT 243
Query: 224 FLPDTSATSLSHNIP 238
FLP + +S P
Sbjct: 244 FLPPGYSIEISSADP 258
Score = 38.1 bits (87), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 81 ALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTF 140
A+ ++ VK+ F + E Y+ FL+++K ++ + V +V LF +L+ F F
Sbjct: 352 AINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLVYFQVSQLFAEAPDLLEEFKRF 411
Query: 141 LP 142
LP
Sbjct: 412 LP 413
>sp|O74755|PST3_SCHPO Paired amphipathic helix protein pst3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pst3 PE=3 SV=1
Length = 1154
Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 131/274 (47%), Gaps = 71/274 (25%)
Query: 47 GGGGAGAGGGSGVGGGGGGMTA----GMGTS--QKLTTSDALTYLKEVKDMFQDQREKYD 100
G + S + G G +++ G+ +S + L +DAL+YL+ VK F ++RE Y+
Sbjct: 78 GKTIVSSLALSSISGKDGSISSQNAEGLSSSSNRPLDVNDALSYLELVKYYFSERREIYN 137
Query: 101 MFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTFLP------------------ 142
FLE+M+DFK+Q DT GVI RV +LF G+ LI GFNTFLP
Sbjct: 138 RFLEIMRDFKSQALDTLGVINRVSELFNGYPQLIEGFNTFLPSGYKIEVQLDSSNTSVVR 197
Query: 143 ----------KGYEITL-----DEDE----------------AP--------PKKTVEFE 163
+G + TL +ED+ AP K V+F
Sbjct: 198 VGTPMHPLPQQGVQSTLPVAPSNEDQRTMESTSPTDSQPQPSAPNLVSSTENEKPRVDFN 257
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTR 223
AI ++NK+K R+ + Y FL +L Y+K K I EV + VA +F+D DLLEEF
Sbjct: 258 YAIAYMNKVKARYPPNSDTYMEFLGVLRTYQKAQKSIFEVRARVAEIFKDSPDLLEEFKL 317
Query: 224 FLPDTSATSLSHNIPFVRNSTQRGNERSAGIPPL 257
FLPD + S + P V+ S R +PP+
Sbjct: 318 FLPD-NVDSTEPSTPNVQKSPNR-------LPPV 343
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 7/196 (3%)
Query: 505 SYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDR 564
+YR LPD + S R +L VLND ++SV NQY ++L ED+R
Sbjct: 499 TYRKLPDSWKQDKCSGRDDLDNSVLNDDYISVAPKPSHVKNIMHHENQYLQALQLVEDER 558
Query: 565 FELDMLLESVSSTAKRAEELLNSINENKIT--LETPFHLKDHFSALNLRCIERLYG-DHG 621
++ D +L + S K +L + E I LET + + + +YG +H
Sbjct: 559 YDYDRVLNTTESAIK----ILANFCEPTIHEHLETALQELERSKRIIKNALIIVYGKEHA 614
Query: 622 LDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNHYKSLDHRSFYFK 681
+D L K A PV+L R+K K +EW + + +++K+W +I KN + D R +
Sbjct: 615 NLALDTLFKKLPTAAPVLLKRIKTKDQEWRRSKREWSKIWRQIEKKNAQAAFDDRYCRIE 674
Query: 682 QQDSKNLSTKSLVAEI 697
+D + LS ++ +I
Sbjct: 675 GRDRRGLSYSRILRDI 690
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 1144 FYGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDG 1203
F+GN YVLFRL Y R++ K+ + + AS + Y + L G
Sbjct: 846 FFGNATMYVLFRLICVCYSRLEHIKLFVESSTIY------ASSTGGYENILNICEKYLKG 899
Query: 1204 SIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESRKP 1263
S +F + Y++ ++++LL + ++ + D +L+ L+E + +
Sbjct: 900 SCSRLEFRKYLQKFNNETCYMICSIERLLKVIFYRIHEILLDPKLGQLLLLFESDGANSV 959
Query: 1264 GKQIDSVYYEN--ARVLLHEENIYRIQLSSSPSRLSIQ 1299
+ + Y N +L E I+ ++ RL IQ
Sbjct: 960 TTPREQMVYRNHVESILAPESKIFNMRWYPLEKRLCIQ 997
>sp|O13919|PST2_SCHPO Paired amphipathic helix protein pst2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pst2 PE=1 SV=1
Length = 1075
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 497 SNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVS-VTSGSEDYSFKHMRRNQYEE 555
S+ C PSYRLLP + S S R + +LND WVS T SE+ F R+ YEE
Sbjct: 332 SDFPECGPSYRLLPVEERNISCSGRDDFAWGILNDDWVSHPTWASEESGFIVQRKTPYEE 391
Query: 556 SLFRCEDDRFELDMLLESVSSTAKRAEELLNSINE------NKITLETPFHLKDHFSALN 609
++ + E++R+E D +E+ S T K +++ N INE TLE L ++
Sbjct: 392 AMTKLEEERYEFDRHIEATSWTIKSLKKIQNRINELPEEERETYTLEEGLGLPS--KSIY 449
Query: 610 LRCIERLY-GDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKN 668
+ I+ +Y +H ++ L + P + LP++++RL++K EEW + W I KN
Sbjct: 450 KKTIKLVYTSEHAEEMFKALERMPCLTLPLVISRLEEKNEEWKSVKRSLQPGWRSIEFKN 509
Query: 669 HYKSLDHRSFYFKQQDSKNLSTKSLVAE 696
+ KSLD + YFK +D KN+S+K L+AE
Sbjct: 510 YDKSLDSQCVYFKARDKKNVSSKFLLAE 537
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 114/275 (41%), Gaps = 27/275 (9%)
Query: 1145 YGNDDFYVLFRLHQTLYERI--------------QWAKMNTTGAEMKRRTSKEASCSDL- 1189
+G YV FRL LYER+ Q N + K + SD+
Sbjct: 744 FGYSSMYVFFRLFNLLYERLYELQRLEDQVSIIQQRIIPNPVSQKQKIWRDRWNDLSDVP 803
Query: 1190 -----YARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAA 1244
Y + L+ G +D + FED R GN++Y ++T+DKL++ KQ+ + +
Sbjct: 804 DEKTHYENTYVMILRLIYGIVDQSAFEDYLRFYYGNKAYKIYTIDKLVWSAAKQVHHIVS 863
Query: 1245 DEMDNKLIQLYEYEESRKPGKQIDSVYY--ENARVLLHEENIYRIQLSSSPSRLSIQLMD 1302
D + L E S P K D Y E ++L +E ++R + I++M
Sbjct: 864 DGKYKFVTSLVEQNSSASPKKNYDDFLYRLEIEKLLNPDEILFRFCWINKFKSFGIKIMK 923
Query: 1303 NVIEKPEAFAVTMDPNFAAYLLN---DFLSAFLGKKEPHAVVLRRNKRRFEGLDELSAAC 1359
+ T + Y+ N L+ + K L RN + +++L +
Sbjct: 924 RANLIVDQSLDTQRRVWKKYVQNYRIQKLTEEISYKNYRCPFLCRNIEKERTVEQLVSRL 983
Query: 1360 MA--MEGVQLVNGLECRIACNSYKITYVLDTEDVF 1392
+ +LV+GL+ ++ +S+K+ Y+ TED +
Sbjct: 984 QTKLLRSAELVSGLQAKLCLDSFKLLYLPRTEDSY 1018
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 99 YDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTFLPKGYEITLDEDEA---- 154
Y F++V+K + D G I R+ + + + +L+ N FLP Y+ L A
Sbjct: 57 YSAFMDVVKALHNEIVDFPGFIERISVILRDYPDLLEYLNIFLPSSYKYLLSNSGANFTL 116
Query: 155 ----------PPKKTV--------EFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKE 196
P V + AI FV+++++ ++ + + L ++
Sbjct: 117 QFTTPSGPVSTPSTYVATYNDLPCTYHRAIGFVSRVRRALLSNPEQFFKLQDSLRKFKNS 176
Query: 197 HKDINEVYSEVASLFEDHADLLEEFTRFLPDT 228
++E+ + V SL +H L EF FLP +
Sbjct: 177 ECSLSELQTIVTSLLAEHPSLAHEFHNFLPSS 208
Score = 38.5 bits (88), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 168 FVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPD 227
FV K+ +R + +VY +F++++ E D ++ + D+ DLLE FLP
Sbjct: 42 FVQKLGQRLCHRPYVYSAFMDVVKALHNEIVDFPGFIERISVILRDYPDLLEYLNIFLPS 101
Query: 228 TSATSLSHN 236
+ LS++
Sbjct: 102 SYKYLLSNS 110
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 67/94 (71%), Gaps = 8/94 (8%)
Query: 63 GGGMTAGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIAR 122
GGG G+ TT DAL YLK VKD F+D EKYD FLEV+ D K Q DT+GVIAR
Sbjct: 297 GGGNMGGV------TTGDALNYLKAVKDKFEDS-EKYDTFLEVLNDCKHQGVDTSGVIAR 349
Query: 123 VKDLFKGHNNLIFGFNTFLPKGYEIT-LDEDEAP 155
+KDLFKGH++L+ GFNT+L K Y+IT L ED+ P
Sbjct: 350 LKDLFKGHDDLLLGFNTYLSKEYQITILPEDDFP 383
Score = 40.8 bits (94), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTR 223
+A+ ++ +K +F + E Y +FLE+LN + + D + V + + LF+ H DLL F
Sbjct: 308 DALNYLKAVKDKFEDSEK-YDTFLEVLNDCKHQGVDTSGVIARLKDLFKGHDDLLLGFNT 366
Query: 224 FL 225
+L
Sbjct: 367 YL 368
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 554,274,214
Number of Sequences: 539616
Number of extensions: 26256388
Number of successful extensions: 236823
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 957
Number of HSP's that attempted gapping in prelim test: 136794
Number of HSP's gapped (non-prelim): 44632
length of query: 1423
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1293
effective length of database: 121,419,379
effective search space: 156995257047
effective search space used: 156995257047
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)