Your job contains 1 sequence.
>000561
MKRIRDDVYGGSQFKRPLTTAPPRGESYGLSPQLPGTGAGGGGGAGGGGGAGAGGGSGVG
GGGGGMTAGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVI
ARVKDLFKGHNNLIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDE
HVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFV
RNSTQRGNERSAGIPPLRQMQMDKHRRRDRIATSHADRDLSVDRPEMDDEKLMIKMQKEQ
RRRAEKENRDRRNRDQDDREIEHDNNRDFNLQRFPDKKKSIKKVEGFGANSSLASYDDKD
ALKSIYNQGFIFCDKVKEKLCSDDYQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLM
DEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKE
KYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYS
FKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDH
FSALNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEI
YAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVIP
HLEYGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPSRPSDVEGA
EDAGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTELNNLCRTALSN
GDTITKENVLDSDRVYRDDLSCSALQLEKEQKNVDISDKRSGIIIQVAVGERVANSDASP
AIGAENSHGRTGSEMMSASLRPCDAAKDDLKHEANVNPVPPSEVTQGCDLAKPTLLENGA
LRDGAKGINYHEKSVGPTKIEKEEGELSPNGDFEEDNFGVYGDAAVKTLPKAKHGVESRQ
YQSKNEKGLQHQVVGGENDADADDEDSGNASVAGDDASGSESAGDEYSREEHEEEEDVER
DDVDGKAESEGEADGMADQHFVGGDCMSLPMSERFLLSVKPLAKFVPATSVEERKDCRVF
YGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGS
IDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESRKPG
KQIDSVYYENARVLLHEENIYRIQLSSSPSRLSIQLMDNVIEKPEAFAVTMDPNFAAYLL
NDFLSAFLGKKEPHAVVLRRNKRRFEGLDELSAACMAMEGVQLVNGLECRIACNSYKITY
VLDTEDVFYRRKRRRTYRARSSHYNQARVLRFHRFLSAS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000561
(1419 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2100277 - symbol:SNL1 "AT3G01320" species:3702... 3638 0. 2
TAIR|locus:2147845 - symbol:SNL2 "AT5G15020" species:3702... 2673 2.2e-286 2
DICTYBASE|DDB_G0281045 - symbol:DDB_G0281045 "paired amph... 568 4.9e-109 7
RGD|1311598 - symbol:Sin3a "SIN3 transcription regulator ... 495 1.9e-101 7
UNIPROTKB|F1SJ69 - symbol:SIN3A "Uncharacterized protein"... 495 2.4e-98 6
UNIPROTKB|F1MTR3 - symbol:SIN3A "Uncharacterized protein"... 495 4.9e-98 6
UNIPROTKB|J9P8L1 - symbol:SIN3A "Uncharacterized protein"... 498 1.5e-97 6
ZFIN|ZDB-GENE-070620-3 - symbol:sin3aa "SIN3 homolog A, t... 481 3.7e-97 6
MGI|MGI:107157 - symbol:Sin3a "transcriptional regulator,... 495 8.6e-97 6
UNIPROTKB|Q96ST3 - symbol:SIN3A "Paired amphipathic helix... 495 1.4e-96 6
UNIPROTKB|E1BX21 - symbol:SIN3A "Uncharacterized protein"... 492 1.1e-94 6
UNIPROTKB|J9NXS4 - symbol:SIN3B "Uncharacterized protein"... 498 1.3e-94 7
ZFIN|ZDB-GENE-030131-2066 - symbol:sin3ab "SIN3 homolog A... 480 1.5e-93 6
UNIPROTKB|F1NMJ8 - symbol:SIN3B "Uncharacterized protein"... 487 2.5e-93 7
UNIPROTKB|E1BGW5 - symbol:LOC520505 "Uncharacterized prot... 484 5.9e-91 6
UNIPROTKB|F1PN34 - symbol:SIN3B "Uncharacterized protein"... 514 2.1e-89 6
ZFIN|ZDB-GENE-030131-8264 - symbol:sin3b "SIN3 homolog B,... 474 2.5e-89 6
MGI|MGI:107158 - symbol:Sin3b "transcriptional regulator,... 480 3.5e-89 6
FB|FBgn0022764 - symbol:Sin3A "Sin3A" species:7227 "Droso... 521 4.6e-89 6
UNIPROTKB|F1PH07 - symbol:SIN3A "Uncharacterized protein"... 498 4.0e-87 6
UNIPROTKB|O75182 - symbol:SIN3B "Paired amphipathic helix... 495 3.2e-86 6
UNIPROTKB|F1S9U7 - symbol:SIN3B "Uncharacterized protein"... 493 7.4e-79 6
SGD|S000005364 - symbol:SIN3 "Component of the Sin3p-Rpd3... 396 9.4e-79 6
POMBASE|SPBC12C2.10c - symbol:pst1 "Clr6 histone deacetyl... 376 2.2e-69 7
ASPGD|ASPL0000051511 - symbol:AN1546 species:162425 "Emer... 320 9.5e-61 5
POMBASE|SPBC1734.16c - symbol:pst3 "SIN3 family co-repres... 224 1.3e-50 5
POMBASE|SPAC23C11.15 - symbol:pst2 "Clr6 histone deacetyl... 316 2.6e-46 7
TAIR|locus:2032397 - symbol:AT1G24200 "AT1G24200" species... 447 6.7e-41 1
TAIR|locus:2020603 - symbol:AT1G70030 "AT1G70030" species... 436 1.0e-39 1
UNIPROTKB|O01319 - symbol:sin-3 "Protein SIN-3, isoform a... 237 1.3e-33 5
WB|WBGene00004117 - symbol:sin-3 species:6239 "Caenorhabd... 236 1.7e-33 5
UNIPROTKB|A5JYW9 - symbol:sin-3 "Protein SIN-3, isoform b... 236 1.7e-33 5
TAIR|locus:2032442 - symbol:AT1G24230 "AT1G24230" species... 307 5.8e-26 1
TAIR|locus:2165887 - symbol:AT5G35610 "AT5G35610" species... 285 1.3e-23 1
TAIR|locus:2015919 - symbol:AT1G27280 "AT1G27280" species... 249 8.9e-20 1
TAIR|locus:2012838 - symbol:AT1G10250 "AT1G10250" species... 239 1.0e-18 1
TAIR|locus:2015994 - symbol:AT1G27260 "AT1G27260" species... 218 7.0e-18 2
TAIR|locus:2032362 - symbol:AT1G24250 "AT1G24250" species... 172 7.3e-18 2
TAIR|locus:2032422 - symbol:AT1G24210 "AT1G24210" species... 144 3.6e-17 2
TAIR|locus:2147870 - symbol:AT5G15040 "AT5G15040" species... 212 7.8e-16 1
TAIR|locus:2118116 - symbol:WRKY19 species:3702 "Arabidop... 258 2.1e-15 2
TAIR|locus:2205754 - symbol:AT1G27220 species:3702 "Arabi... 185 5.8e-13 1
TAIR|locus:2016024 - symbol:AT1G27250 "AT1G27250" species... 177 4.2e-12 1
TAIR|locus:2034860 - symbol:AT1G23810 "AT1G23810" species... 175 2.0e-11 1
TAIR|locus:2087203 - symbol:AT3G24260 "AT3G24260" species... 176 2.8e-11 2
UNIPROTKB|H3BP90 - symbol:SIN3A "Paired amphipathic helix... 159 3.4e-10 1
TAIR|locus:2032427 - symbol:AT1G24220 "AT1G24220" species... 163 5.6e-09 2
TAIR|locus:2015899 - symbol:AT1G27270 "AT1G27270" species... 150 1.3e-08 2
TAIR|locus:2015949 - symbol:AT1G27240 "AT1G27240" species... 138 5.9e-08 1
TAIR|locus:2090744 - symbol:AT3G28870 "AT3G28870" species... 147 1.0e-06 1
ZFIN|ZDB-GENE-060503-728 - symbol:si:dkey-27c15.3 "si:dke... 129 0.00067 1
>TAIR|locus:2100277 [details] [associations]
symbol:SNL1 "AT3G01320" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0016926 "protein desumoylation" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045892 GO:GO:0006351
EMBL:AC010676 Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602
KO:K11644 InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
IPI:IPI00521144 RefSeq:NP_186781.4 UniGene:At.41297 HSSP:Q62141
ProteinModelPortal:Q9SRH9 SMR:Q9SRH9 IntAct:Q9SRH9 STRING:Q9SRH9
PaxDb:Q9SRH9 PRIDE:Q9SRH9 EnsemblPlants:AT3G01320.1 GeneID:821265
KEGG:ath:AT3G01320 TAIR:At3g01320 HOGENOM:HOG000030343 OMA:SKPENSA
ProtClustDB:CLSN2681550 Genevestigator:Q9SRH9 Uniprot:Q9SRH9
Length = 1372
Score = 3638 (1285.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 758/1303 (58%), Positives = 926/1303 (71%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNN 132
SQKLTT+DAL+YL+EVK+MFQDQREKYD FLEVMKDFKAQRTDT GVIARVK+LFKGHNN
Sbjct: 50 SQKLTTNDALSYLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVKELFKGHNN 109
Query: 133 LIFGFNTFLPKGYEITL-DEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILN 191
LI+GFNTFLPKGYEITL +ED+A PKKTVEFE+AI FVNKIK RF +DEHVYKSFLEILN
Sbjct: 110 LIYGFNTFLPKGYEITLIEEDDALPKKTVEFEQAINFVNKIKMRFKHDEHVYKSFLEILN 169
Query: 192 MYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIP-FVRNSTQRGNER 250
MYRKE+K+I EVY+EV+ LF+ H DLLE+FTRFLP A+ SH+ R+ Q+ ++R
Sbjct: 170 MYRKENKEIKEVYNEVSILFQGHLDLLEQFTRFLP---ASLPSHSAAQHSRSQAQQYSDR 226
Query: 251 SAGIPPLRQMQMDKHRRRDRIATSHADRDLSVDRPEMDDEKLMIKMQKEQXXXXXXXXXX 310
+ P L QMQ++K RRR+R D SV+R +++D+K M+K+Q+EQ
Sbjct: 227 GSDPPLLHQMQVEKERRRERAVALRGD--YSVERYDLNDDKTMVKIQREQRKRLDKENRA 284
Query: 311 XXXXXXXXXXXXHDNNRDFNLQRFPDKKKSIKKVEGFGANSSLASYDDKDALKSIYNQGF 370
DN L FP+K+KS ++ E A S AS+ +KD LKS+Y Q F
Sbjct: 285 RRGRDLDDREAGQDN-----LHHFPEKRKSSRRAEALEAYSGSASHSEKDNLKSMYKQAF 339
Query: 371 IFCDKVKEKLCS-DDYQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFER 429
+FC+KVK++LCS DDYQ FLKCL+I+SNGII+R DLQNLV+DLLGK+ DLMDEFN FFER
Sbjct: 340 VFCEKVKDRLCSQDDYQTFLKCLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEFNQFFER 399
Query: 430 CENI-DGF--LAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKEKYYAKS 486
CE+I DGF LAGVMSKK ++ +SR +K+E+K+ EHK E+E KE ++ K++Y KS
Sbjct: 400 CESITDGFQRLAGVMSKKLFSSEEQLSRPMKVEEKESEHKPELEAVKETEQCKKEYMGKS 459
Query: 487 IQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRR 546
IQELDLS+C+ CTPSYRLLP DYPIP ASQRSELGA+VLNDHWVSVTSGSEDYSFKHMRR
Sbjct: 460 IQELDLSDCECCTPSYRLLPADYPIPIASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRR 519
Query: 547 NQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFSALNL 606
NQYEESLFRCEDDRFELDMLLESVSS A+ AE LLN I E KI+ F ++DHF+ALNL
Sbjct: 520 NQYEESLFRCEDDRFELDMLLESVSSAARSAESLLNIITEKKISFSGSFRIEDHFTALNL 579
Query: 607 RCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNHY 666
RCIERLYGDHGLDV+DIL KNPA ALPV+LTRLKQKQ EW KCR DF+KVWA +YAKNHY
Sbjct: 580 RCIERLYGDHGLDVIDILNKNPATALPVILTRLKQKQGEWKKCRDDFDKVWANVYAKNHY 639
Query: 667 KSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVIPHLEYGY 726
KSLDHRSFYFKQQDSKNLS KSL+AEIK+ KE Q +DDVL I+AG+RQP+ P+LEY Y
Sbjct: 640 KSLDHRSFYFKQQDSKNLSAKSLLAEIKELKEKSQNDDDVLLSISAGYRQPINPNLEYEY 699
Query: 727 SDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPSRPSDVEGAEDAG-K 785
+ IHED++K+VQ+SCEE+CSTK+QL+K ++LW FLE +L VP R + ED
Sbjct: 700 LNRAIHEDMFKVVQFSCEELCSTKEQLSKVLRLWENFLEAVLGVPPRAKGTDLVEDVVIN 759
Query: 786 ARHSGKNNSASSMVESDGSPGPD-GTVNSRQPISSGNGDENTSTELNNLCRTALSNGDTI 844
+ N+S S E+ S G D + SR+ S+ NGDEN+S+ L N D+
Sbjct: 760 PKTLDVNHSTSPNGEAAVSSGGDTARLASRKLKSAANGDENSSSGTFKH-GIGLLNKDST 818
Query: 845 TKENVLDSDRVYRDDLSCSALQLEKEQKNVDISDKRSGIIIQVAVGERVANSDASPAIGA 904
KEN+ D + RD ++CSA++ +KEQ+ + ++KR G I + + ER A S S GA
Sbjct: 819 GKENLEDVEIANRDGVACSAVKPQKEQETGNEAEKRFGKPIPMDISERAAISSISIPSGA 878
Query: 905 ENSHGRTGSEMMSAS----LRPCDAAKDDLKHEANVNPVPPSEVTQGCDLAKPTLLENGA 960
EN+H G E++ + +P D D + H+ V+ + TQG D+ +L NG
Sbjct: 879 ENNHCVVGKEVLPGAHEIQAKPSDTLTD-IHHD--VDSIETVHSTQGGDVGNSIVLANGL 935
Query: 961 LRDGAKGINYHEKSVGPTKIEKEEGELSPNGDFEEDNFGVYGDAAVKTLPKAKHGVESRQ 1020
D +KG + GP++ EKEEGELSPNGDFE DNFGVY D HGV+S
Sbjct: 936 RSDSSKGTRNSDDPEGPSRNEKEEGELSPNGDFE-DNFGVYKD----------HGVKST- 983
Query: 1021 YQSKNEKGLQHQVVXXXXXXXXXXXXXXXXXVAGDDASGSESAGXXXXXXXXXXXXXXXX 1080
SK E + +V A + ASG+ES G
Sbjct: 984 --SKPENSAEAEVEADAEVENEDDADDVDSENASE-ASGTESGGDVCSQDEDREEENGEH 1040
Query: 1081 XXXXGKAESEGEADGMADQHFVGGDCMSLPMSERFLLSVKPLAKFVPATSVEER-KDCRV 1139
GKAESEGEA+GM D H + G+ LP SER LLSV+PL+K V A +ER KD +V
Sbjct: 1041 DEIDGKAESEGEAEGM-DPHLLEGESELLPQSERVLLSVRPLSKHVAAVLCDERTKDLQV 1099
Query: 1140 FYGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDG 1199
FYGNDDFYVLFRLHQ LYERI +AK N +G E+K + K+ + D YARFM LY LLDG
Sbjct: 1100 FYGNDDFYVLFRLHQILYERILYAKRNCSGGELKSKNLKDTNAGDPYARFMRVLYGLLDG 1159
Query: 1200 SIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESRKP 1259
S +N KFEDECRAIIGNQSYVLFTLDKL+YRL KQLQ + ADEMDNKL+QLYEYE+SRKP
Sbjct: 1160 SAENTKFEDECRAIIGNQSYVLFTLDKLIYRLVKQLQAIVADEMDNKLLQLYEYEKSRKP 1219
Query: 1260 GKQIDSVYYENARVLLHEENIYRIQLSSSPSRLSIQLMDNVIEKPEAFAVTMDPNFAAYL 1319
G+ IDSVYYEN RVL+HEENIYR++ SS PSRLSIQLMDN+IEKPEA+AV+MDP FA+Y+
Sbjct: 1220 GRVIDSVYYENVRVLVHEENIYRLECSSLPSRLSIQLMDNIIEKPEAYAVSMDPTFASYM 1279
Query: 1320 LNDFLSAFLGKKEP-HAVVLRRNKRRFEGLDELSAACMAMEGV 1361
+ LS GKKE H +VL+RN GL +L A +E V
Sbjct: 1280 QTELLSVSSGKKEEGHDIVLQRN---LTGLYDLCKAMEGVEVV 1319
Score = 1099 (391.9 bits), Expect = 1.1e-118, Sum P(2) = 1.1e-118
Identities = 245/456 (53%), Positives = 293/456 (64%)
Query: 965 AKGINYHEKSVGPTKIEKEEGELSPNGDFEEDNFGVYGDAAVKTLPKAKHGVESRQYQSK 1024
A G+ + S G + EG S N + EE GD HGV+S SK
Sbjct: 932 ANGLR-SDSSKGTRNSDDPEGP-SRN-EKEEGELSPNGDFEDNFGVYKDHGVKST---SK 985
Query: 1025 NEKGLQHQVVXXXXXXXXXXXXXXXXXVAGDDASGSESAGXXXXXXXXXXXXXXXXXXXX 1084
E + +V A + ASG+ES G
Sbjct: 986 PENSAEAEVEADAEVENEDDADDVDSENASE-ASGTESGGDVCSQDEDREEENGEHDEID 1044
Query: 1085 GKAESEGEADGMADQHFVGGDCMSLPMSERFLLSVKPLAKFVPATSVEER-KDCRVFYGN 1143
GKAESEGEA+GM D H + G+ LP SER LLSV+PL+K V A +ER KD +VFYGN
Sbjct: 1045 GKAESEGEAEGM-DPHLLEGESELLPQSERVLLSVRPLSKHVAAVLCDERTKDLQVFYGN 1103
Query: 1144 DDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDN 1203
DDFYVLFRLHQ LYERI +AK N +G E+K + K+ + D YARFM LY LLDGS +N
Sbjct: 1104 DDFYVLFRLHQILYERILYAKRNCSGGELKSKNLKDTNAGDPYARFMRVLYGLLDGSAEN 1163
Query: 1204 AKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESRKPGKQI 1263
KFEDECRAIIGNQSYVLFTLDKL+YRL KQLQ + ADEMDNKL+QLYEYE+SRKPG+ I
Sbjct: 1164 TKFEDECRAIIGNQSYVLFTLDKLIYRLVKQLQAIVADEMDNKLLQLYEYEKSRKPGRVI 1223
Query: 1264 DSVYYENARVLLHEENIYRIQLSSSPSRLSIQLMDNVIEKPEAFAVTMDPNFAAYLLNDF 1323
DSVYYEN RVL+HEENIYR++ SS PSRLSIQLMDN+IEKPEA+AV+MDP FA+Y+ +
Sbjct: 1224 DSVYYENVRVLVHEENIYRLECSSLPSRLSIQLMDNIIEKPEAYAVSMDPTFASYMQTEL 1283
Query: 1324 LSAFLGKKEP-HAVVLRRNKRRFEGLDELSAACMAMEGVQLVNGLECRIACNSYKITYVL 1382
LS GKKE H +VL+RN GL +L C AMEGV++VNGLEC+++C+SYKI YVL
Sbjct: 1284 LSVSSGKKEEGHDIVLQRN---LTGLYDL---CKAMEGVEVVNGLECKMSCSSYKIAYVL 1337
Query: 1383 DTEDVFYXXXXXXXXXXXSSHYNQARVLRFHRFLSA 1418
DTED F+ N+ RV RFHRFLSA
Sbjct: 1338 DTEDYFHRKKKKKKTEQLWQR-NKVRVERFHRFLSA 1372
Score = 90 (36.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 1 MKRIRDDVYG-GSQFKRPLTTAPPRGESYGLSP 32
MKRIRDDVY GSQF+RPL ++ RG+ G SP
Sbjct: 1 MKRIRDDVYASGSQFRRPLGSS--RGQLCGQSP 31
>TAIR|locus:2147845 [details] [associations]
symbol:SNL2 "AT5G15020" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0010048 "vernalization response"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AL391146
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 HSSP:Q62141
HOGENOM:HOG000030343 ProtClustDB:CLSN2681550 EMBL:AK118953
IPI:IPI00531017 PIR:T51447 RefSeq:NP_197006.2 UniGene:At.43354
ProteinModelPortal:Q9LFQ3 SMR:Q9LFQ3 STRING:Q9LFQ3 PaxDb:Q9LFQ3
PRIDE:Q9LFQ3 EnsemblPlants:AT5G15020.1 GeneID:831354
KEGG:ath:AT5G15020 TAIR:At5g15020 InParanoid:Q9LFQ3 OMA:LFRLHRV
PhylomeDB:Q9LFQ3 Genevestigator:Q9LFQ3 Uniprot:Q9LFQ3
Length = 1367
Score = 2673 (946.0 bits), Expect = 2.2e-286, Sum P(2) = 2.2e-286
Identities = 538/877 (61%), Positives = 657/877 (74%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNN 132
+QKLTT DALTYLKEVK+MFQDQR+KYDMFLEVMKDFKAQ+TDT+GVI+RVK+LFKGHNN
Sbjct: 45 TQKLTTDDALTYLKEVKEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGHNN 104
Query: 133 LIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNM 192
LIFGFNTFLPKG+EITLD+ EAP KKTVEFEEAI+FVNKIK RF ++E VYKSFLEILNM
Sbjct: 105 LIFGFNTFLPKGFEITLDDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEILNM 164
Query: 193 YRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQRGNERSA 252
YRK++KDI EVY+EV++LFEDH+DLLEEFTRFLPD+ A + +R+ QR ++R +
Sbjct: 165 YRKDNKDITEVYNEVSTLFEDHSDLLEEFTRFLPDSLAPHTEAQL--LRSQAQRYDDRGS 222
Query: 253 GIPPLRQMQMDKHRRRDRIATSHADRDLSVDRPEMDDEKLMIKMQKEQXXXXXXXXXXXX 312
G P +R+M M+K RRR+R S DRD SVDR +++D+K M+KM ++Q
Sbjct: 223 GPPLVRRMFMEKDRRRERTVASRGDRDHSVDRSDLNDDKSMVKMHRDQRKRVDKDNRERR 282
Query: 313 XXXXXXXXXXHDNNRDFNLQRFPDKKKSIKKVEGFGANSSLASYDDKDALKSIYNQGFIF 372
DN LQ F +K+KS +++EGF A S AS+ +K+ LKS+YNQ F+F
Sbjct: 283 SRDLEDGEAEQDN-----LQHFSEKRKSSRRMEGFEAYSGPASHSEKNNLKSMYNQAFLF 337
Query: 373 CDKVKEKLCS-DDYQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFERCE 431
C+KVKE+LCS DDYQAFLKCL+++SNGII+R DLQNLV+D+LGK+ DLMDEFN FFERCE
Sbjct: 338 CEKVKERLCSQDDYQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKFPDLMDEFNQFFERCE 397
Query: 432 NIDGF--LAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKEKYYAKSIQE 489
+IDGF LAGVMSKKSL ++ ++SRSVK E+KDREHKR++E KEK+R K+KY KSIQE
Sbjct: 398 SIDGFQHLAGVMSKKSLGSEENLSRSVKGEEKDREHKRDVEAAKEKERSKDKYMGKSIQE 457
Query: 490 LDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQY 549
LDLS+C+RCTPSYRLLP DYPIPS R + GA VLNDHWVSVTSGSEDYSFKHMRRNQY
Sbjct: 458 LDLSDCERCTPSYRLLPPDYPIPSVRHRQKSGAAVLNDHWVSVTSGSEDYSFKHMRRNQY 517
Query: 550 EESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFSALNLRCI 609
EESLFRCEDDRFELDMLLESV S AK AEELLN I + KI+ E F ++DHF+ALNLRCI
Sbjct: 518 EESLFRCEDDRFELDMLLESVGSAAKSAEELLNIIIDKKISFEGSFRIEDHFTALNLRCI 577
Query: 610 ERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNHYKSL 669
ERLYGDHGLDV D++RKNPA ALPV+LTRLKQKQ+EWTKCR FN VWA++YAKNHYKSL
Sbjct: 578 ERLYGDHGLDVTDLIRKNPAAALPVILTRLKQKQDEWTKCREGFNVVWADVYAKNHYKSL 637
Query: 670 DHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVIPHLEYGYSDS 729
DHRSFYFKQQDSKNLS K+LV+E+K KE Q EDDV+ I+AG+RQP+IPHLEY Y D
Sbjct: 638 DHRSFYFKQQDSKNLSAKALVSEVKDLKEKSQKEDDVVLSISAGYRQPIIPHLEYDYLDR 697
Query: 730 NIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPSRPSDVEGAEDAGKARHS 789
IHEDL+KLVQ+SCEE+CSTK+Q K +KLW FLE ML V R + ED + +H
Sbjct: 698 AIHEDLFKLVQFSCEEICSTKEQTGKVLKLWANFLELMLDVAPRAKGSDSVEDVVETQHQ 757
Query: 790 GKNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTELNNLCRTALSNGDTITKENV 849
S + SD ++ SRQ + NGD + S+ ++ T L N D+ KEN+
Sbjct: 758 RAFTSGEANESSDAI-----SLVSRQLKFATNGDVHASSGVSKHGETGLLNRDSSGKENL 812
Query: 850 LDSDRVYRDDLSCSALQLEKEQKNVDISD---KRSGIIIQVAVGERVANSDASPAIGAEN 906
D D +D +C+ EK QK+ +I + KRSG V ERVA S +S G EN
Sbjct: 813 KDGDLANKDVATCA----EKPQKDQEIGNGAAKRSG-----DVDERVATSSSSFPSGVEN 863
Query: 907 SHGRTGSEMMSASL----RPCDAAK--DDLKHEANVN 937
++G+ GS S S +P +A D ++H V+
Sbjct: 864 NNGKVGSRDSSGSRGILSKPSEAIDKVDSIQHTQGVD 900
Score = 1285 (457.4 bits), Expect = 3.1e-142, Sum P(3) = 3.1e-142
Identities = 307/653 (47%), Positives = 407/653 (62%)
Query: 803 GSPGPDGTVNSRQPISSGNGDENTSTELNNLCRTAL---SNGDT-----ITKEN---VLD 851
GS + V ++ + +G+ N S++ +L L +NGD ++K +L+
Sbjct: 744 GSDSVEDVVETQHQRAFTSGEANESSDAISLVSRQLKFATNGDVHASSGVSKHGETGLLN 803
Query: 852 SDRVYRDDLSCSALQ-------LEKEQKNVDISD---KRSGIIIQVAVGERVANSDASPA 901
D +++L L EK QK+ +I + KRSG V ERVA S +S
Sbjct: 804 RDSSGKENLKDGDLANKDVATCAEKPQKDQEIGNGAAKRSG-----DVDERVATSSSSFP 858
Query: 902 IGAENSHGRTGSEMMSASLRPCDAAKDDLKHEANVNPVPPSEVTQGCDLAKPTLLENGAL 961
G EN++G+ GS S S R +K EA ++ V + TQG D+ + +L NG
Sbjct: 859 SGVENNNGKVGSRDSSGS-RGI-LSKPS---EA-IDKVDSIQHTQGVDIGRIIVLGNGLQ 912
Query: 962 RDGAKGINYHEKSVGPTKIEKEEGELSPNGDFEEDNFGVYGDAAVKTLPKAKHGVESRQY 1021
D +K + +++S GP+KIEKEEGELSP GD EDNF VY D +K K +H VE+
Sbjct: 913 SDTSKANSNYDESGGPSKIEKEEGELSPVGD-SEDNFVVYEDRELKATAKTEHSVEA--- 968
Query: 1022 QSKNEKGLQHQVVXXXXXXXXXXXXXXXXXVAGDDASGSESAGXXXXXXXXXXXXXXXXX 1081
+ +N++ + AG+DASG+ES G
Sbjct: 969 EGENDEDADDE-------------DGDDASEAGEDASGTESIGDECSQDDNGVEEEGEHD 1015
Query: 1082 XXXGKAESEGEADGMADQHFVGGDCMSLPMSERFLLSVKPLAKFVPATSV--EERKDCRV 1139
GKAESEGEA+GM + H + D P SER LLSVKPL+K + A ++ E++KD RV
Sbjct: 1016 EIDGKAESEGEAEGM-ESHLIE-DKGLFPSSERVLLSVKPLSKHIAAAALVDEKKKDSRV 1073
Query: 1140 FYGNDDFYVLFRLHQT------------LYERIQWAKMNTTGAEMKRRTSKEASCSDLYA 1187
FYGNDDFYVLFRLH+ LYERI AK +G+EMK R +K+ D YA
Sbjct: 1074 FYGNDDFYVLFRLHRVSAIDSYDLLSHILYERILSAKTYCSGSEMKLRNTKDTCSPDPYA 1133
Query: 1188 RFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDNKL 1247
RFM AL++LL+GS +N+KFEDECRAIIGNQSYVLFTL+KL+Y+L KQLQ V AD+MDNKL
Sbjct: 1134 RFMNALFSLLNGSAENSKFEDECRAIIGNQSYVLFTLEKLIYKLVKQLQAVVADDMDNKL 1193
Query: 1248 IQLYEYEESRKPGKQIDSVYYENARVLLHEENIYRIQLSSSPSRLSIQLMDNVIEKPEAF 1307
+QLYEYE SR+PG+ DSVYYENAR+LLHEENIYR++ SSSPSRLSIQLMDN+IEKP+A+
Sbjct: 1194 LQLYEYENSRRPGRVFDSVYYENARILLHEENIYRLECSSSPSRLSIQLMDNIIEKPDAY 1253
Query: 1308 AVTMDPNFAAYLLNDFLSAFLGKKEPHAVVLRRNKRRFEGLDELSAACMAMEGVQLVNGL 1367
AV+M+P F +YL N+FLS GKKE +VL+RN R + GLD+L+ AC AMEGVQ++NGL
Sbjct: 1254 AVSMEPTFTSYLQNEFLSNSSGKKELQDIVLQRNMRGYNGLDDLAVACKAMEGVQVINGL 1313
Query: 1368 ECRIACNSYKITYVLDTEDVFYXXXXXXXXXXXS-SHYNQARVLRFHRFLSAS 1419
EC+++C+SYKI+YVLDTED F+ S + +Q R+ RFH+FLSAS
Sbjct: 1314 ECKMSCSSYKISYVLDTEDFFHRKKKQKKSNNLSLAKLSQNRIARFHKFLSAS 1366
Score = 102 (41.0 bits), Expect = 2.2e-286, Sum P(2) = 2.2e-286
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 1 MKRIRDDVYG-GSQFKRPLTTAPPRGESYGLSP 32
MKRIRDD+Y GSQFKRPL ++ RGESY SP
Sbjct: 1 MKRIRDDIYATGSQFKRPLGSS--RGESYEQSP 31
Score = 40 (19.1 bits), Expect = 3.1e-142, Sum P(3) = 3.1e-142
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 190 LNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSA 230
+N + D EV +F+D D + F + D A
Sbjct: 43 INTQKLTTDDALTYLKEVKEMFQDQRDKYDMFLEVMKDFKA 83
>DICTYBASE|DDB_G0281045 [details] [associations]
symbol:DDB_G0281045 "paired amphipathic helix (PAH)
containing protein" species:44689 "Dictyostelium discoideum"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 dictyBase:DDB_G0281045 GO:GO:0005634 GO:GO:0006355
EMBL:AAFI02000040 InterPro:IPR011050 SUPFAM:SSF51126
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 RefSeq:XP_640783.1
ProteinModelPortal:Q54UJ3 SMR:Q54UJ3 EnsemblProtists:DDB0216409
GeneID:8622836 KEGG:ddi:DDB_G0281045 InParanoid:Q54UJ3
Uniprot:Q54UJ3
Length = 1934
Score = 568 (205.0 bits), Expect = 4.9e-109, Sum P(7) = 4.9e-109
Identities = 124/339 (36%), Positives = 195/339 (57%)
Query: 489 ELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQ 548
E+D + C+R PSYR LP +YP P + RSEL VLND WVS +GSED+ FK R+NQ
Sbjct: 1180 EIDFTTCKRLGPSYRALPKNYPQPRCTGRSELAESVLNDVWVSFPTGSEDFGFKSQRKNQ 1239
Query: 549 YEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFSALNLRC 608
+EE+LF+CED+RFELD+++E +ST + + +LNS+ + F + + L+ R
Sbjct: 1240 FEENLFKCEDERFELDLIIELNASTIRVLDPILNSLIDMHDHERLNFRMPN-LDVLHHRS 1298
Query: 609 IERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNHYKS 668
IERLY + G++++ L NP ++LPV+L RLKQK +EW K + ++NKVW + KN+Y+S
Sbjct: 1299 IERLYNNKGMEIITALYNNPLVSLPVILKRLKQKDQEWRKAKREWNKVWKDTTEKNYYRS 1358
Query: 669 LDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVI--P--HLEY 724
LD++S FKQ D K L+ K L+AEI+Q K E D L + +Q +I P HL Y
Sbjct: 1359 LDYQSTSFKQSDKKTLTPKVLLAEIRQKYSEKIRERDDLLQRRSRIKQTIIKPPPYHLLY 1418
Query: 725 GYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPSRPSDVEGAEDAG 784
D + ++ L+ ++ E++ +D L K FL + + D+ E +
Sbjct: 1419 FMPDYKVCSNISSLILFAAEKIVQKQD-LEKIENFLNFFLLTFFYIDNDKKDLIIDEKSP 1477
Query: 785 KARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGD 823
++ NN+ ++ ++ +P T + ++ N D
Sbjct: 1478 NNNNNTNNNTNNN--NNNNTPTNTTTTTTPSTLNKSNED 1514
Score = 207 (77.9 bits), Expect = 4.9e-109, Sum P(7) = 4.9e-109
Identities = 49/150 (32%), Positives = 77/150 (51%)
Query: 151 EDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASL 210
+++ P KK E + A +V KIK RF N VY+ FLEIL+ Y E + I +VY +VA L
Sbjct: 614 QNQPPQKKQTELDHARNYVKKIKNRFINQPDVYRHFLEILHNYHNEPQTIKDVYDQVADL 673
Query: 211 FEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQRGNERSAGIPPLRQMQMDKHRRRDR 270
F H DLL EFT+FLPD A + S N V Q+ + + +Q Q + ++ +
Sbjct: 674 FRAHPDLLSEFTQFLPD--AVNASQNPNAVLEQQQQQMLQQQQLQQQQQQQQQQMLQQQQ 731
Query: 271 IATSHADRDLSVDRPEMDDEKLMIKMQKEQ 300
+ L + + ++ + Q++Q
Sbjct: 732 --QQQQQQQLQQQQQQQQQQQQQQQQQQQQ 759
Score = 194 (73.4 bits), Expect = 4.9e-109, Sum P(7) = 4.9e-109
Identities = 42/85 (49%), Positives = 53/85 (62%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
Q+ +A +L++VK F Q Y+ FL++MKD KA DT VIARV +LFKGH +L
Sbjct: 411 QQQQFDNAFYFLEQVKMQFSKQPRIYNQFLDIMKDLKAHNIDTPVVIARVIELFKGHKHL 470
Query: 134 IFGFNTFLPKGYEI---TLDEDEAP 155
I GFNTFLP Y I T D+D P
Sbjct: 471 ISGFNTFLPADYRIDVSTFDDDGKP 495
Score = 194 (73.4 bits), Expect = 4.9e-109, Sum P(7) = 4.9e-109
Identities = 45/132 (34%), Positives = 74/132 (56%)
Query: 1176 TSKEASCSDL--YARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCK 1233
T +E+ SD+ Y RF+++L +DG + K+ED CR+ +G SY+LFTLDKL+ +L +
Sbjct: 1662 TIEESELSDVERYDRFISSLQEFMDGDSNQEKYEDSCRSYLGISSYILFTLDKLINQLAR 1721
Query: 1234 QLQTVAADEMDNKLIQLYEYEESRKPGKQIDSVYYENARVLLHEENIY--RIQLSSSP-S 1290
QLQ + E +L+ L+ E G D +Y+ +L +E ++ + +S P
Sbjct: 1722 QLQALLQGENCLRLLYLFTLEVKSYTGWS-DELYHSKVLEVLKDERVFLFEFEATSQPMG 1780
Query: 1291 RLSIQLMDNVIE 1302
+I+LMD E
Sbjct: 1781 TFTIELMDPTSE 1792
Score = 112 (44.5 bits), Expect = 1.3e-83, Sum P(6) = 1.3e-83
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 153 EAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFE 212
++P ++ +F+ A F+ ++K +F +Y FL+I+ + + D V + V LF+
Sbjct: 406 QSPIRQQQQFDNAFYFLEQVKMQFSKQPRIYNQFLDIMKDLKAHNIDTPVVIARVIELFK 465
Query: 213 DHADLLEEFTRFLP 226
H L+ F FLP
Sbjct: 466 GHKHLISGFNTFLP 479
Score = 106 (42.4 bits), Expect = 6.8e-83, Sum P(6) = 6.8e-83
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 74 QKLTTSD-ALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNN 132
+K T D A Y+K++K+ F +Q + Y FLE++ ++ + V +V DLF+ H +
Sbjct: 620 KKQTELDHARNYVKKIKNRFINQPDVYRHFLEILHNYHNEPQTIKDVYDQVADLFRAHPD 679
Query: 133 LIFGFNTFLP 142
L+ F FLP
Sbjct: 680 LLSEFTQFLP 689
Score = 100 (40.3 bits), Expect = 4.9e-109, Sum P(7) = 4.9e-109
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 1135 KDCRVFYGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSK 1178
K R+FYGN+ FY+ RL+Q LYER+ AK A TSK
Sbjct: 1541 KTKRIFYGNNTFYIFLRLYQILYERLHKAKELAESAMKSHWTSK 1584
Score = 79 (32.9 bits), Expect = 4.1e-92, Sum P(6) = 4.1e-92
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 372 FCDKVKEKLCS--DDYQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFER 429
+ K+K + + D Y+ FL+ LH Y N D+ + V DL + DL+ EF F
Sbjct: 631 YVKKIKNRFINQPDVYRHFLEILHNYHNEPQTIKDVYDQVADLFRAHPDLLSEFTQFLPD 690
Query: 430 CEN 432
N
Sbjct: 691 AVN 693
Score = 78 (32.5 bits), Expect = 4.9e-109, Sum P(7) = 4.9e-109
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 1366 GLECRIACNSYKITYVLDTEDVFY 1389
GLECRI +Y++ YV DT D FY
Sbjct: 1878 GLECRICTQTYRLFYVEDTTDYFY 1901
Score = 78 (32.5 bits), Expect = 4.9e-109, Sum P(7) = 4.9e-109
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 372 FCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTD-LLGKYMDLMDEFNHF 426
F KV+ + ++ Y FLKCL+++S II R +L LV D LL + L + F F
Sbjct: 1096 FFHKVRTGVPNNKLYNEFLKCLNLFSQEIISRTELVLLVKDILLPRLPALFEWFKSF 1152
Score = 65 (27.9 bits), Expect = 4.1e-75, Sum P(5) = 4.1e-75
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 460 DKDREHKREMEVTKEKDRYKEKYYAKSIQELD 491
+KDRE RE E +EK+R +E+ SI L+
Sbjct: 207 EKDRERDREREREREKERERERERESSISPLN 238
Score = 60 (26.2 bits), Expect = 1.3e-74, Sum P(5) = 1.3e-74
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 450 GHVSRSVKIEDKDREHKREMEVTKEKDRYKE 480
G +S K ++DRE +RE E +E++R +E
Sbjct: 201 GILSEREKDRERDREREREREKERERERERE 231
Score = 56 (24.8 bits), Expect = 9.9e-48, Sum P(6) = 9.9e-48
Identities = 36/147 (24%), Positives = 66/147 (44%)
Query: 724 YGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKL-WTTFLEPMLS-VPSRPSDVEGAE 781
YG + I LY+++ Y E + K+ AMK WT+ +P ++ S S+ +
Sbjct: 1547 YGNNTFYIFLRLYQIL-Y--ERLHKAKELAESAMKSHWTS--KPNVTRFFSANSNTDSNN 1601
Query: 782 DAGKARHSG--KNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTELNNLCRTALS 839
D+ + +G +N+ ++ ++ + T + SS + + N S NN T +
Sbjct: 1602 DSMDEKLNGISHSNNNNNNNNTNNTTATTTTTTTTTTNSSESSNNNNSENSNN---TTTT 1658
Query: 840 NGDTITKENVLDSDRVYRDDLSCSALQ 866
TI + + D +R Y D S+LQ
Sbjct: 1659 TPITIEESELSDVER-Y--DRFISSLQ 1682
Score = 52 (23.4 bits), Expect = 2.6e-89, Sum P(6) = 2.6e-89
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKE 196
E + F +K++ N++ +Y FL+ LN++ +E
Sbjct: 1092 EELDFFHKVRTGVPNNK-LYNEFLKCLNLFSQE 1123
Score = 52 (23.4 bits), Expect = 1.5e-49, Sum P(6) = 1.5e-49
Identities = 16/82 (19%), Positives = 36/82 (43%)
Query: 784 GKARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTELN-----NLCRTAL 838
G + NN +SM+ S+ + + N+ ++ N + N + N N+ +
Sbjct: 1014 GVQMYPTNNNLINSMMNSNANNNNNNNNNNNNNNNNNNNNNNIMNQQNMNQQQNM-NNMI 1072
Query: 839 SNGDTITKENVLDSDRVYRDDL 860
SN + I N++ ++ ++L
Sbjct: 1073 SNNNNINNNNIIVGEQGTYEEL 1094
Score = 52 (23.4 bits), Expect = 1.4e-29, Sum P(5) = 1.4e-29
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 1213 IIGNQSYVLFTLDKLLYRLCKQLQTVAAD-EMDNKLIQLYEYEESRKPGKQ 1262
II VL D LL RL + + +D++ I+L E E PGKQ
Sbjct: 1124 IISRTELVLLVKDILLPRLPALFEWFKSFIGVDDQSIELLERMEQSSPGKQ 1174
Score = 45 (20.9 bits), Expect = 2.9e-52, Sum P(7) = 2.9e-52
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 808 DGTVNSRQPISSGNGDENTSTELNNLCRTALSNGDTITKENVLDSDRVYRDDLSCSALQ 866
D ++ + P ++ N + NT+ NN T + T + N + D +D S L+
Sbjct: 1469 DLIIDEKSPNNNNNTNNNTNNNNNNNTPTNTTTTTTPSTLNKSNEDVEMKDGNSDGGLK 1527
Score = 44 (20.5 bits), Expect = 2.5e-17, Sum P(4) = 2.5e-17
Identities = 26/100 (26%), Positives = 36/100 (36%)
Query: 762 TFLEPMLSVPSRPSDVEGAEDAGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGN 821
T L P+ S PS +GA + G N+ S P T +S ISS
Sbjct: 16 TTLPPLSPTLSPPSPQQGANISKLTSPPGGPNTLPSF----SFPPSSNTTSS---ISSPT 68
Query: 822 GDENTSTELNNLCRTALSNGDTITKENVLDSDRVYRDDLS 861
TE+N+ +N + N DR+ LS
Sbjct: 69 SPIERVTEINSSSNNNNNNNNN-NNNNRSSHDRISPTALS 107
Score = 42 (19.8 bits), Expect = 4.8e-28, Sum P(4) = 4.8e-28
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 473 KEKDRYKEKYYAKSIQELDLSNCQRCTPSYRL 504
+++ + ++ +I E L C+ CT +YRL
Sbjct: 1860 QQQQKLMDEALKDTINETGLE-CRICTQTYRL 1890
Score = 41 (19.5 bits), Expect = 6.0e-28, Sum P(4) = 6.0e-28
Identities = 11/68 (16%), Positives = 34/68 (50%)
Query: 1229 YRLCKQLQTVAADEMDNKLI-QLYEYEESRKPGKQIDSVYYENARVLLHEENIYRIQLSS 1287
Y+ +QLQ + +L+ Q + ++ ++ Q ++ + LH++ +++ QL+
Sbjct: 841 YQQQQQLQQQQQQQQQQQLLAQQQQQQQQQQQALQQQQLHQQQ----LHQQQLHQQQLAQ 896
Query: 1288 SPSRLSIQ 1295
++++
Sbjct: 897 QHQPMNLE 904
Score = 39 (18.8 bits), Expect = 5.7e-88, Sum P(6) = 5.7e-88
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 406 QNLVTDLLGKYMDLMDEFNHFFERCEN 432
+N V + ++++ D + HF E N
Sbjct: 629 RNYVKKIKNRFINQPDVYRHFLEILHN 655
Score = 37 (18.1 bits), Expect = 7.3e-76, Sum P(6) = 7.3e-76
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 245 QRGNERSAGIPPL----RQMQMDKHRRRDRIATSHA 276
+R ER + I PL +Q Q +++ + SH+
Sbjct: 225 ERERERESSISPLNSHQQQSQQQSQQQQQQQQQSHS 260
>RGD|1311598 [details] [associations]
symbol:Sin3a "SIN3 transcription regulator homolog A (yeast)"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000776 "kinetochore" evidence=IEA;ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=IEA;ISO] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA;ISO] [GO:0001701 "in utero
embryonic development" evidence=IEA;ISO] [GO:0002218 "activation of
innate immune response" evidence=ISO] [GO:0002230 "positive
regulation of defense response to virus by host" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007568 "aging" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0010243 "response to organic nitrogen"
evidence=IDA] [GO:0016580 "Sin3 complex" evidence=IEA;ISO]
[GO:0017053 "transcriptional repressor complex" evidence=IEA;ISO]
[GO:0031937 "positive regulation of chromatin silencing"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034613 "cellular protein localization" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IDA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051329 "interphase of
mitotic cell cycle" evidence=IEA;ISO] [GO:0051595 "response to
methylglyoxal" evidence=IEA;ISO] [GO:0071333 "cellular response to
glucose stimulus" evidence=IEA;ISO] [GO:1900181 "negative
regulation of protein localization to nucleus" evidence=ISO]
[GO:1901675 "negative regulation of histone H3-K27 acetylation"
evidence=ISO] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=ISO] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 RGD:1311598 GO:GO:0017053
GO:GO:0043066 GO:GO:0043234 GO:GO:0000776 GO:GO:0034613
GO:GO:0032403 GO:GO:0071333 GO:GO:0003677 GO:GO:0006260
GO:GO:0007568 GO:GO:0001701 GO:GO:0000785 GO:GO:0003700
GO:GO:0003682 GO:GO:0005667 GO:GO:0010243 GO:GO:0051595
GO:GO:0001106 GO:GO:0043619 GO:GO:0016580 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0051329 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 OrthoDB:EOG48KR9G IPI:IPI00190130
Ensembl:ENSRNOT00000041686 UCSC:RGD:1311598 ArrayExpress:D3ZIN2
Uniprot:D3ZIN2
Length = 1282
Score = 495 (179.3 bits), Expect = 1.9e-101, Sum P(7) = 1.9e-101
Identities = 115/313 (36%), Positives = 173/313 (55%)
Query: 479 KEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSED 538
KE+ E+D ++C+R SYR LP Y P + R+ L +VLND WVS S SED
Sbjct: 536 KERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSED 595
Query: 539 YSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLK 598
+F ++ QYEE ++RCED+RFELD++LE+ +T + E + ++ + F L
Sbjct: 596 STFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLD 655
Query: 599 DHFSA----LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFN 654
+ ++ + ++R+Y D D++D LRKNP+IA+P++L RLK K+EEW + + FN
Sbjct: 656 NTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFN 715
Query: 655 KVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQ---TEDDVLFVIA 711
KVW E K + KSLDH+ FKQ D+K L +KSL+ EI+ + +Q TE++
Sbjct: 716 KVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEEN------ 769
Query: 712 AGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSV 770
AG PV PHL Y D I ED L+ + + K+ K ++ F+ +L
Sbjct: 770 AG--VPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFA 827
Query: 771 PSRP-SDVEGAED 782
SDVE E+
Sbjct: 828 QRGDLSDVEEEEE 840
Score = 225 (84.3 bits), Expect = 1.9e-101, Sum P(7) = 1.9e-101
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
Q+L DAL+YL +VK F Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH +L
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178
Query: 134 IFGFNTFLPKGYEITLDEDE 153
I GFNTFLP GY+I + ++
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198
Score = 176 (67.0 bits), Expect = 1.9e-101, Sum P(7) = 1.9e-101
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 147 ITLDEDEAPP---KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINE- 202
+T+ AP + VEF AI +VNKIK RF +YK+FLEIL+ Y+KE ++ E
Sbjct: 286 VTISLGTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 345
Query: 203 ------------VYSEVASLFEDHADLLEEFTRFLPDTSATSL 233
VY++VA LF++ DLL EF +FLPD +++ L
Sbjct: 346 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVL 388
Score = 175 (66.7 bits), Expect = 1.9e-101, Sum P(7) = 1.9e-101
Identities = 41/154 (26%), Positives = 81/154 (52%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K ++ +++ + + D Y F+ + +LLDG+ID++++ED R + +Y+ FT
Sbjct: 938 KSDSPAIQLRLKEPMDVDVEDYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFT 997
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESR-KPGKQI---------DSVYYENARV 1273
+DKL+ + +QLQ + +DE+ ++ LY E + G Q+ +S Y A
Sbjct: 998 MDKLIQSIVRQLQHIVSDEVCVQVTDLYLAENNNGATGGQLSSQTSRSLLESTYQRKAEQ 1057
Query: 1274 LLHEENIYRIQLSSSPSR--LSIQLMDNVIEKPE 1305
L+ +EN +++ S + L+I+L+D E +
Sbjct: 1058 LMSDENCFKLMFIQSQGQVQLTIELLDTEEENSD 1091
Score = 122 (48.0 bits), Expect = 9.2e-77, Sum P(6) = 9.2e-77
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLE 219
++ E+A+++++++K +F + VY FL+I+ ++ + D V S V+ LF+ H DL+
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180
Query: 220 EFTRFLP 226
F FLP
Sbjct: 181 GFNTFLP 187
Score = 114 (45.2 bits), Expect = 1.9e-101, Sum P(7) = 1.9e-101
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 352 SLASYDDKDALKSIYNQGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVT 410
SL DA K +F DKV++ L S + Y+ FL+CL I++ +I R +L LV+
Sbjct: 447 SLKESSMADASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVS 506
Query: 411 DLLGKYMDLMDEFNHFFERCENI 433
LGK+ +L + F +F E++
Sbjct: 507 PFLGKFPELFNWFKNFLGYKESV 529
Score = 89 (36.4 bits), Expect = 1.9e-101, Sum P(7) = 1.9e-101
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 1340 RNKRRFEGLDELSAACMAMEGVQLVNGLECRIACNSYKITYVLDTEDVFY 1389
R ++ EG + S ME V+ ++ LECR NSYK+ YV+ +ED Y
Sbjct: 1149 REQQEKEGKEGNSKK--TMENVESLDKLECRFKLNSYKMVYVIKSEDYMY 1196
Score = 88 (36.0 bits), Expect = 3.0e-73, Sum P(6) = 3.0e-73
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDF-KAQRT--DTAG----------V 119
+Q + + A+ Y+ ++K+ FQ Q + Y FLE++ + K QR + G V
Sbjct: 299 NQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEV 358
Query: 120 IARVKDLFKGHNNLIFGFNTFLP 142
A+V LFK +L+ F FLP
Sbjct: 359 YAQVARLFKNQEDLLSEFGQFLP 381
Score = 58 (25.5 bits), Expect = 1.9e-101, Sum P(7) = 1.9e-101
Identities = 22/70 (31%), Positives = 33/70 (47%)
Query: 1092 EADGMADQHF-VGGDCMSLPMSERFLLSVKPLAKFVPATSVEERKDCRVFYGNDDFYVLF 1150
EA G +H VGG P + L S K ++E + +FY N+++Y+
Sbjct: 847 EATGAPKKHNGVGGS----PPKSKLLFSNTAAQKL---RGMDEVYN--LFYVNNNWYIFM 897
Query: 1151 RLHQTLYERI 1160
RLHQ L R+
Sbjct: 898 RLHQILCLRL 907
Score = 53 (23.7 bits), Expect = 4.2e-81, Sum P(6) = 4.2e-81
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIY 395
+N + +K+K + D Y+AFL+ LH Y
Sbjct: 304 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTY 335
Score = 52 (23.4 bits), Expect = 5.3e-81, Sum P(6) = 5.3e-81
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 168 FVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFL 225
F +K++K + E Y++FL L ++ +E E+ V+ +L F FL
Sbjct: 467 FFDKVRKALRSAE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 523
Score = 43 (20.2 bits), Expect = 5.7e-86, Sum P(6) = 5.7e-86
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 904 AENSHGRTGSEMMSASLR 921
AEN++G TG ++ S + R
Sbjct: 1027 AENNNGATGGQLSSQTSR 1044
Score = 39 (18.8 bits), Expect = 1.3e-60, Sum P(5) = 1.3e-60
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+ D+VK + S Y FL + + + I + + V+ L + DL+ FN F
Sbjct: 129 YLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTF 185
Score = 38 (18.4 bits), Expect = 4.2e-50, Sum P(6) = 4.2e-50
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 446 LCNDGHVSRSVKIEDKDREHKRE-MEVTKEK 475
+C+ R ++ E+++RE +RE + + ++K
Sbjct: 910 ICSQAE--RQIEEENREREWEREVLGIKRDK 938
Score = 38 (18.4 bits), Expect = 2.0e-44, Sum P(6) = 2.0e-44
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 331 LQRFPDKKKSIKKVEGFGANSSLASYDDKDALKSIYNQGFIF 372
L+R K++ ++ + G N ++K LKS+ +QG F
Sbjct: 697 LKRLKMKEEEWREAQR-GFNKVWREQNEKYYLKSLDHQGINF 737
>UNIPROTKB|F1SJ69 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071333 "cellular response to glucose stimulus"
evidence=IEA] [GO:0051595 "response to methylglyoxal" evidence=IEA]
[GO:0051329 "interphase of mitotic cell cycle" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 GO:GO:0017053 GO:GO:0043066 GO:GO:0000776
GO:GO:0034613 GO:GO:0071333 GO:GO:0003677 GO:GO:0006260
GO:GO:0001701 GO:GO:0003700 GO:GO:0003682 GO:GO:0005667
GO:GO:0051595 GO:GO:0001106 GO:GO:0016580 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0051329 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 OMA:PNQNGCQ GeneTree:ENSGT00390000007239
EMBL:CU467588 Ensembl:ENSSSCT00000002105 Uniprot:F1SJ69
Length = 1227
Score = 495 (179.3 bits), Expect = 2.4e-98, Sum P(6) = 2.4e-98
Identities = 115/313 (36%), Positives = 173/313 (55%)
Query: 479 KEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSED 538
KE+ E+D ++C+R SYR LP Y P + R+ L +VLND WVS S SED
Sbjct: 489 KERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSED 548
Query: 539 YSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLK 598
+F ++ QYEE ++RCED+RFELD++LE+ +T + E + ++ + F L
Sbjct: 549 STFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLD 608
Query: 599 DHFSA----LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFN 654
+ ++ + ++R+Y D D++D LRKNP+IA+P++L RLK K+EEW + + FN
Sbjct: 609 NTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFN 668
Query: 655 KVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQ---TEDDVLFVIA 711
KVW E K + KSLDH+ FKQ D+K L +KSL+ EI+ + +Q TE++
Sbjct: 669 KVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEEN------ 722
Query: 712 AGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSV 770
AG PV PHL Y D I ED L+ + + K+ K ++ F+ +L
Sbjct: 723 AG--VPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFA 780
Query: 771 PSRP-SDVEGAED 782
SDVE E+
Sbjct: 781 QRGDLSDVEEEEE 793
Score = 225 (84.3 bits), Expect = 2.4e-98, Sum P(6) = 2.4e-98
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
Q+L DAL+YL +VK F Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH +L
Sbjct: 72 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 131
Query: 134 IFGFNTFLPKGYEITLDEDE 153
I GFNTFLP GY+I + ++
Sbjct: 132 IMGFNTFLPPGYKIEVQTND 151
Score = 184 (69.8 bits), Expect = 2.4e-98, Sum P(6) = 2.4e-98
Identities = 43/103 (41%), Positives = 61/103 (59%)
Query: 147 ITLDEDEAPP---KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINE- 202
+T+ APP + VEF AI +VNKIK RF +YK+FLEIL+ Y+KE ++ E
Sbjct: 239 VTISLGTAPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 298
Query: 203 ------------VYSEVASLFEDHADLLEEFTRFLPDTSATSL 233
VY++VA LF++ DLL EF +FLPD +++ L
Sbjct: 299 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVL 341
Score = 177 (67.4 bits), Expect = 2.4e-98, Sum P(6) = 2.4e-98
Identities = 52/196 (26%), Positives = 95/196 (48%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K ++ +++ + + D Y F+ + +LLDG+ID++++ED R + +Y+ FT
Sbjct: 891 KSDSPAIQLRLKEPMDVDVEDYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFT 950
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESR-KPGKQI---------DSVYYENARV 1273
+DKL+ + +QLQ + +DE+ ++ LY E + G Q+ +S Y A
Sbjct: 951 MDKLIQSIVRQLQHIVSDEICVQVTDLYLAENNNGATGGQLNTQTSRSLLESTYQRKAEQ 1010
Query: 1274 LLHEENIYRIQLSSSPSR--LSIQLMDNVIEKPE--AFAVTMDPNFAAYLLNDFLSAFLG 1329
L+ +EN +++ S + L+I+L+D E + A Y+ +D S L
Sbjct: 1011 LMSDENCFKLMFIQSQGQVQLTIELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELR 1070
Query: 1330 KKEPHA-VVLRRNKRR 1344
+ V L RN RR
Sbjct: 1071 EHLARKPVFLPRNLRR 1086
Score = 122 (48.0 bits), Expect = 6.6e-73, Sum P(5) = 6.6e-73
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLE 219
++ E+A+++++++K +F + VY FL+I+ ++ + D V S V+ LF+ H DL+
Sbjct: 74 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 133
Query: 220 EFTRFLP 226
F FLP
Sbjct: 134 GFNTFLP 140
Score = 115 (45.5 bits), Expect = 2.4e-98, Sum P(6) = 2.4e-98
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 352 SLASYDDKDALKSIYNQGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVT 410
SL DA K +F DKV++ L S + Y+ FL+CL I++ +I R +L LV+
Sbjct: 400 SLKDSSMADASKHGVGTESLFFDKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQLVS 459
Query: 411 DLLGKYMDLMDEFNHFFERCENI 433
LGK+ +L + F +F E++
Sbjct: 460 PFLGKFPELFNWFKNFLGYKESV 482
Score = 108 (43.1 bits), Expect = 3.4e-91, Sum P(6) = 3.4e-91
Identities = 40/144 (27%), Positives = 65/144 (45%)
Query: 1263 IDSVYYENARVLLHEENIYRIQLSSSPSR--LSIQLMDNVIEKPE--AFAVTMDPNFAAY 1318
++S Y A L+ +EN +++ S + L+I+L+D E + A Y
Sbjct: 1000 LESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTIELLDTEEENSDDPVEAERWSDYVERY 1059
Query: 1319 LLNDFLSAFLGK---KEPHAVVLRRNKRRFE----GLDELSA------ACMAMEGVQLVN 1365
+ +D S L + ++P V L RN RR G ++ + ME ++
Sbjct: 1060 MNSDTTSPELREHLARKP--VFLPRNLRRIRKCQRGREQQEKEGKEGNSKKTMENADSLD 1117
Query: 1366 GLECRIACNSYKITYVLDTEDVFY 1389
LECR NSYK+ YV+ +ED Y
Sbjct: 1118 KLECRFKLNSYKMVYVIKSEDYMY 1141
Score = 88 (36.0 bits), Expect = 2.3e-69, Sum P(5) = 2.3e-69
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDF-KAQRT--DTAG----------V 119
+Q + + A+ Y+ ++K+ FQ Q + Y FLE++ + K QR + G V
Sbjct: 252 NQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEV 311
Query: 120 IARVKDLFKGHNNLIFGFNTFLP 142
A+V LFK +L+ F FLP
Sbjct: 312 YAQVARLFKNQEDLLSEFGQFLP 334
Score = 63 (27.2 bits), Expect = 2.4e-98, Sum P(6) = 2.4e-98
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 1092 EADGMADQHF-VGGDCMSLPMSERFLLSVKPLAKFVPATSVEERKDCRVFYGNDDFYVLF 1150
EA G A +H VGG P + L S K ++E + +FY N+++Y+
Sbjct: 800 EATGAAKKHNGVGGS----PPKSKLLFSNTAAQKL---RGMDEVYN--LFYVNNNWYIFM 850
Query: 1151 RLHQTLYERI 1160
RLHQ L R+
Sbjct: 851 RLHQILCLRL 860
Score = 53 (23.7 bits), Expect = 3.7e-77, Sum P(5) = 3.7e-77
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIY 395
+N + +K+K + D Y+AFL+ LH Y
Sbjct: 257 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTY 288
Score = 53 (23.7 bits), Expect = 3.7e-77, Sum P(5) = 3.7e-77
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 168 FVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFL 225
F +K++K + E Y++FL L ++ +E E+ V+ +L F FL
Sbjct: 420 FFDKVRKALRSTE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 476
Score = 39 (18.8 bits), Expect = 1.1e-88, Sum P(6) = 1.1e-88
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 904 AENSHGRTGSEMMSASLR 921
AEN++G TG ++ + + R
Sbjct: 980 AENNNGATGGQLNTQTSR 997
Score = 39 (18.8 bits), Expect = 8.0e-57, Sum P(4) = 8.0e-57
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+ D+VK + S Y FL + + + I + + V+ L + DL+ FN F
Sbjct: 82 YLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTF 138
Score = 38 (18.4 bits), Expect = 9.4e-47, Sum P(5) = 9.4e-47
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 446 LCNDGHVSRSVKIEDKDREHKRE-MEVTKEK 475
+C+ R ++ E+++RE +RE + + ++K
Sbjct: 863 ICSQAE--RQIEEENREREWEREVLGIKRDK 891
Score = 38 (18.4 bits), Expect = 2.0e-41, Sum P(5) = 2.0e-41
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 331 LQRFPDKKKSIKKVEGFGANSSLASYDDKDALKSIYNQGFIF 372
L+R K++ ++ + G N ++K LKS+ +QG F
Sbjct: 650 LKRLKMKEEEWREAQR-GFNKVWREQNEKYYLKSLDHQGINF 690
Score = 37 (18.1 bits), Expect = 3.6e-33, Sum P(4) = 3.6e-33
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 448 NDGHVSRSVKIEDKDREHKRE-MEVTKEKDRYKEKY 482
+ G V ++++ D + E+ + +E + D Y E+Y
Sbjct: 1025 SQGQVQLTIELLDTEEENSDDPVEAERWSD-YVERY 1059
>UNIPROTKB|F1MTR3 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071333 "cellular response to glucose stimulus"
evidence=IEA] [GO:0051595 "response to methylglyoxal" evidence=IEA]
[GO:0051329 "interphase of mitotic cell cycle" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 GO:GO:0017053 GO:GO:0043066 GO:GO:0000776
GO:GO:0034613 GO:GO:0071333 GO:GO:0003677 GO:GO:0006260
GO:GO:0001701 GO:GO:0003700 GO:GO:0003682 GO:GO:0005667
GO:GO:0051595 GO:GO:0001106 GO:GO:0016580 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0051329 KO:K11644 InterPro:IPR013194
Pfam:PF08295 SMART:SM00761 CTD:25942 OMA:PNQNGCQ
GeneTree:ENSGT00390000007239 EMBL:DAAA02052491 IPI:IPI01028188
RefSeq:XP_002696677.1 RefSeq:XP_003583795.1 RefSeq:XP_003587608.1
RefSeq:XP_880544.4 Ensembl:ENSBTAT00000013167 GeneID:518504
KEGG:bta:518504 NextBio:20872670 Uniprot:F1MTR3
Length = 1274
Score = 495 (179.3 bits), Expect = 4.9e-98, Sum P(6) = 4.9e-98
Identities = 115/313 (36%), Positives = 173/313 (55%)
Query: 479 KEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSED 538
KE+ E+D ++C+R SYR LP Y P + R+ L +VLND WVS S SED
Sbjct: 536 KERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSED 595
Query: 539 YSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLK 598
+F ++ QYEE ++RCED+RFELD++LE+ +T + E + ++ + F L
Sbjct: 596 STFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLD 655
Query: 599 DHFSA----LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFN 654
+ ++ + ++R+Y D D++D LRKNP+IA+P++L RLK K+EEW + + FN
Sbjct: 656 NTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFN 715
Query: 655 KVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQ---TEDDVLFVIA 711
KVW E K + KSLDH+ FKQ D+K L +KSL+ EI+ + +Q TE++
Sbjct: 716 KVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEEN------ 769
Query: 712 AGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSV 770
AG PV PHL Y D I ED L+ + + K+ K ++ F+ +L
Sbjct: 770 AG--VPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFA 827
Query: 771 PSRP-SDVEGAED 782
SDVE E+
Sbjct: 828 QRGDLSDVEEEEE 840
Score = 225 (84.3 bits), Expect = 4.9e-98, Sum P(6) = 4.9e-98
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
Q+L DAL+YL +VK F Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH +L
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178
Query: 134 IFGFNTFLPKGYEITLDEDE 153
I GFNTFLP GY+I + ++
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198
Score = 184 (69.8 bits), Expect = 4.9e-98, Sum P(6) = 4.9e-98
Identities = 43/103 (41%), Positives = 61/103 (59%)
Query: 147 ITLDEDEAPP---KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINE- 202
+T+ APP + VEF AI +VNKIK RF +YK+FLEIL+ Y+KE ++ E
Sbjct: 286 VTISLGTAPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 345
Query: 203 ------------VYSEVASLFEDHADLLEEFTRFLPDTSATSL 233
VY++VA LF++ DLL EF +FLPD +++ L
Sbjct: 346 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVL 388
Score = 177 (67.4 bits), Expect = 4.9e-98, Sum P(6) = 4.9e-98
Identities = 52/196 (26%), Positives = 95/196 (48%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K ++ +++ + + D Y F+ + +LLDG+ID++++ED R + +Y+ FT
Sbjct: 938 KSDSPAIQLRLKEPMDVDVEDYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFT 997
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESR-KPGKQI---------DSVYYENARV 1273
+DKL+ + +QLQ + +DE+ ++ LY E + G Q+ +S Y A
Sbjct: 998 MDKLIQSIVRQLQHIVSDEICVQVTDLYLAENNNGATGGQLNTQTSRSLLESTYQRKAEQ 1057
Query: 1274 LLHEENIYRIQLSSSPSR--LSIQLMDNVIEKPE--AFAVTMDPNFAAYLLNDFLSAFLG 1329
L+ +EN +++ S + L+I+L+D E + A Y+ +D S L
Sbjct: 1058 LMSDENCFKLMFIQSQGQVQLTIELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELR 1117
Query: 1330 KKEPHA-VVLRRNKRR 1344
+ V L RN RR
Sbjct: 1118 EHLARKPVFLPRNLRR 1133
Score = 122 (48.0 bits), Expect = 1.2e-72, Sum P(5) = 1.2e-72
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLE 219
++ E+A+++++++K +F + VY FL+I+ ++ + D V S V+ LF+ H DL+
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180
Query: 220 EFTRFLP 226
F FLP
Sbjct: 181 GFNTFLP 187
Score = 114 (45.2 bits), Expect = 4.9e-98, Sum P(6) = 4.9e-98
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 352 SLASYDDKDALKSIYNQGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVT 410
SL DA K +F DKV++ L S + Y+ FL+CL I++ +I R +L LV+
Sbjct: 447 SLKDSSMADASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVS 506
Query: 411 DLLGKYMDLMDEFNHFFERCENI 433
LGK+ +L + F +F E++
Sbjct: 507 PFLGKFPELFNWFKNFLGYKESV 529
Score = 108 (43.1 bits), Expect = 7.1e-91, Sum P(6) = 7.1e-91
Identities = 40/144 (27%), Positives = 65/144 (45%)
Query: 1263 IDSVYYENARVLLHEENIYRIQLSSSPSR--LSIQLMDNVIEKPE--AFAVTMDPNFAAY 1318
++S Y A L+ +EN +++ S + L+I+L+D E + A Y
Sbjct: 1047 LESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTIELLDTEEENSDDPVEAERWSDYVERY 1106
Query: 1319 LLNDFLSAFLGK---KEPHAVVLRRNKRRFE----GLDELSA------ACMAMEGVQLVN 1365
+ +D S L + ++P V L RN RR G ++ + ME ++
Sbjct: 1107 MNSDTTSPELREHLARKP--VFLPRNLRRIRKCQRGREQQEKEGKEGNSKKTMENADSLD 1164
Query: 1366 GLECRIACNSYKITYVLDTEDVFY 1389
LECR NSYK+ YV+ +ED Y
Sbjct: 1165 KLECRFKLNSYKMVYVIKSEDYMY 1188
Score = 88 (36.0 bits), Expect = 4.7e-69, Sum P(5) = 4.7e-69
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDF-KAQRT--DTAG----------V 119
+Q + + A+ Y+ ++K+ FQ Q + Y FLE++ + K QR + G V
Sbjct: 299 NQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEV 358
Query: 120 IARVKDLFKGHNNLIFGFNTFLP 142
A+V LFK +L+ F FLP
Sbjct: 359 YAQVARLFKNQEDLLSEFGQFLP 381
Score = 63 (27.2 bits), Expect = 4.9e-98, Sum P(6) = 4.9e-98
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 1092 EADGMADQHF-VGGDCMSLPMSERFLLSVKPLAKFVPATSVEERKDCRVFYGNDDFYVLF 1150
EA G A +H VGG P + L S K ++E + +FY N+++Y+
Sbjct: 847 EATGAAKKHNGVGGS----PPKSKLLFSNTAAQKL---RGMDEVYN--LFYVNNNWYIFM 897
Query: 1151 RLHQTLYERI 1160
RLHQ L R+
Sbjct: 898 RLHQILCLRL 907
Score = 53 (23.7 bits), Expect = 5.5e-77, Sum P(5) = 5.5e-77
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIY 395
+N + +K+K + D Y+AFL+ LH Y
Sbjct: 304 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTY 335
Score = 52 (23.4 bits), Expect = 6.9e-77, Sum P(5) = 6.9e-77
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 168 FVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFL 225
F +K++K + E Y++FL L ++ +E E+ V+ +L F FL
Sbjct: 467 FFDKVRKALRSAE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 523
Score = 39 (18.8 bits), Expect = 2.2e-88, Sum P(6) = 2.2e-88
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 904 AENSHGRTGSEMMSASLR 921
AEN++G TG ++ + + R
Sbjct: 1027 AENNNGATGGQLNTQTSR 1044
Score = 39 (18.8 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+ D+VK + S Y FL + + + I + + V+ L + DL+ FN F
Sbjct: 129 YLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTF 185
Score = 38 (18.4 bits), Expect = 1.5e-46, Sum P(5) = 1.5e-46
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 446 LCNDGHVSRSVKIEDKDREHKRE-MEVTKEK 475
+C+ R ++ E+++RE +RE + + ++K
Sbjct: 910 ICSQAE--RQIEEENREREWEREVLGIKRDK 938
Score = 38 (18.4 bits), Expect = 2.5e-41, Sum P(5) = 2.5e-41
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 331 LQRFPDKKKSIKKVEGFGANSSLASYDDKDALKSIYNQGFIF 372
L+R K++ ++ + G N ++K LKS+ +QG F
Sbjct: 697 LKRLKMKEEEWREAQR-GFNKVWREQNEKYYLKSLDHQGINF 737
Score = 37 (18.1 bits), Expect = 5.5e-33, Sum P(4) = 5.5e-33
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 448 NDGHVSRSVKIEDKDREHKRE-MEVTKEKDRYKEKY 482
+ G V ++++ D + E+ + +E + D Y E+Y
Sbjct: 1072 SQGQVQLTIELLDTEEENSDDPVEAERWSD-YVERY 1106
>UNIPROTKB|J9P8L1 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 CTD:25942 OMA:PNQNGCQ
GeneTree:ENSGT00390000007239 EMBL:AAEX03016328 EMBL:AAEX03016329
RefSeq:XP_535546.4 Ensembl:ENSCAFT00000045591 GeneID:478372
KEGG:cfa:478372 Uniprot:J9P8L1
Length = 1274
Score = 498 (180.4 bits), Expect = 1.5e-97, Sum P(6) = 1.5e-97
Identities = 115/313 (36%), Positives = 173/313 (55%)
Query: 479 KEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSED 538
KE+ E+D ++C+R SYR LP Y P + R+ L +VLND WVS S SED
Sbjct: 536 KERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSED 595
Query: 539 YSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLK 598
+F ++ QYEE ++RCED+RFELD++LE+ +T + E + ++ + F L
Sbjct: 596 STFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLD 655
Query: 599 DHFSA----LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFN 654
+ ++ + ++R+Y D D++D LRKNP+IA+P++L RLK K+EEW + + FN
Sbjct: 656 NTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFN 715
Query: 655 KVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQ---TEDDVLFVIA 711
KVW E K + KSLDH+ FKQ D+K L +KSL+ EI+ + +Q TED+
Sbjct: 716 KVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEDN------ 769
Query: 712 AGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSV 770
AG P+ PHL Y D I ED L+ + + K+ K ++ F+ +L
Sbjct: 770 AG--VPIGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFA 827
Query: 771 PSRP-SDVEGAED 782
SDVE E+
Sbjct: 828 QRGDLSDVEEEEE 840
Score = 225 (84.3 bits), Expect = 1.5e-97, Sum P(6) = 1.5e-97
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
Q+L DAL+YL +VK F Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH +L
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178
Query: 134 IFGFNTFLPKGYEITLDEDE 153
I GFNTFLP GY+I + ++
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198
Score = 177 (67.4 bits), Expect = 1.5e-97, Sum P(6) = 1.5e-97
Identities = 52/196 (26%), Positives = 95/196 (48%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K ++ +++ + + D Y F+ + +LLDG+ID++++ED R + +Y+ FT
Sbjct: 938 KSDSPAIQLRLKEPMDVDVEDYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFT 997
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESR-KPGKQI---------DSVYYENARV 1273
+DKL+ + +QLQ + +DE+ ++ LY E + G Q+ +S Y A
Sbjct: 998 MDKLIQSIVRQLQHIVSDEICVQVTDLYLAENNNGATGGQLNTQTSRSLLESTYQRKAEQ 1057
Query: 1274 LLHEENIYRIQLSSSPSR--LSIQLMDNVIEKPE--AFAVTMDPNFAAYLLNDFLSAFLG 1329
L+ +EN +++ S + L+I+L+D E + A Y+ +D S L
Sbjct: 1058 LMSDENCFKLMFIQSQGQVQLTIELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELR 1117
Query: 1330 KKEPHA-VVLRRNKRR 1344
+ V L RN RR
Sbjct: 1118 EHLARKPVFLPRNLRR 1133
Score = 176 (67.0 bits), Expect = 1.5e-97, Sum P(6) = 1.5e-97
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 147 ITLDEDEAPP---KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINE- 202
+T+ AP + VEF AI +VNKIK RF +YK+FLEIL+ Y+KE ++ E
Sbjct: 286 VTISLGTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 345
Query: 203 ------------VYSEVASLFEDHADLLEEFTRFLPDTSATSL 233
VY++VA LF++ DLL EF +FLPD +++ L
Sbjct: 346 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVL 388
Score = 122 (48.0 bits), Expect = 5.6e-73, Sum P(5) = 5.6e-73
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLE 219
++ E+A+++++++K +F + VY FL+I+ ++ + D V S V+ LF+ H DL+
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180
Query: 220 EFTRFLP 226
F FLP
Sbjct: 181 GFNTFLP 187
Score = 114 (45.2 bits), Expect = 1.5e-97, Sum P(6) = 1.5e-97
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 352 SLASYDDKDALKSIYNQGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVT 410
SL DA K +F DKV++ L S + Y+ FL+CL I++ +I R +L LV+
Sbjct: 447 SLKDSSMADASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVS 506
Query: 411 DLLGKYMDLMDEFNHFFERCENI 433
LGK+ +L + F +F E++
Sbjct: 507 PFLGKFPELFNWFKNFLGYKESV 529
Score = 112 (44.5 bits), Expect = 8.1e-91, Sum P(6) = 8.1e-91
Identities = 41/144 (28%), Positives = 66/144 (45%)
Query: 1263 IDSVYYENARVLLHEENIYRIQLSSSPSR--LSIQLMDNVIEKPE--AFAVTMDPNFAAY 1318
++S Y A L+ +EN +++ S + L+I+L+D E + A Y
Sbjct: 1047 LESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTIELLDTEEENSDDPVEAERWSDYVERY 1106
Query: 1319 LLNDFLSAFLGK---KEPHAVVLRRNKRRFE----GLDELSA------ACMAMEGVQLVN 1365
+ +D S L + ++P V L RN RR G ++ + ME V ++
Sbjct: 1107 MNSDTTSPELREHLARKP--VFLPRNLRRIRKCQRGREQQEKEGKEGNSKKTMENVDSLD 1164
Query: 1366 GLECRIACNSYKITYVLDTEDVFY 1389
LECR NSYK+ YV+ +ED Y
Sbjct: 1165 KLECRFKLNSYKMVYVIKSEDYMY 1188
Score = 88 (36.0 bits), Expect = 2.0e-69, Sum P(5) = 2.0e-69
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDF-KAQRT--DTAG----------V 119
+Q + + A+ Y+ ++K+ FQ Q + Y FLE++ + K QR + G V
Sbjct: 299 NQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEV 358
Query: 120 IARVKDLFKGHNNLIFGFNTFLP 142
A+V LFK +L+ F FLP
Sbjct: 359 YAQVARLFKNQEDLLSEFGQFLP 381
Score = 63 (27.2 bits), Expect = 1.5e-97, Sum P(6) = 1.5e-97
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 1092 EADGMADQHF-VGGDCMSLPMSERFLLSVKPLAKFVPATSVEERKDCRVFYGNDDFYVLF 1150
EA G A +H VGG P + L S K ++E + +FY N+++Y+
Sbjct: 847 EATGAAKKHNGVGGS----PPKSKLLFSNTAAQKL---RGMDEVYN--LFYVNNNWYIFM 897
Query: 1151 RLHQTLYERI 1160
RLHQ L R+
Sbjct: 898 RLHQILCLRL 907
Score = 53 (23.7 bits), Expect = 2.5e-77, Sum P(5) = 2.5e-77
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIY 395
+N + +K+K + D Y+AFL+ LH Y
Sbjct: 304 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTY 335
Score = 52 (23.4 bits), Expect = 3.1e-77, Sum P(5) = 3.1e-77
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 168 FVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFL 225
F +K++K + E Y++FL L ++ +E E+ V+ +L F FL
Sbjct: 467 FFDKVRKALRSAE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 523
Score = 39 (18.8 bits), Expect = 2.5e-88, Sum P(6) = 2.5e-88
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 904 AENSHGRTGSEMMSASLR 921
AEN++G TG ++ + + R
Sbjct: 1027 AENNNGATGGQLNTQTSR 1044
Score = 39 (18.8 bits), Expect = 5.0e-57, Sum P(4) = 5.0e-57
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+ D+VK + S Y FL + + + I + + V+ L + DL+ FN F
Sbjct: 129 YLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTF 185
Score = 38 (18.4 bits), Expect = 1.0e-45, Sum P(5) = 1.0e-45
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 446 LCNDGHVSRSVKIEDKDREHKRE-MEVTKEK 475
+C+ R ++ E+++RE +RE + + ++K
Sbjct: 910 ICSQAE--RQIEEENREREWEREVLGIKRDK 938
Score = 38 (18.4 bits), Expect = 1.7e-40, Sum P(5) = 1.7e-40
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 331 LQRFPDKKKSIKKVEGFGANSSLASYDDKDALKSIYNQGFIF 372
L+R K++ ++ + G N ++K LKS+ +QG F
Sbjct: 697 LKRLKMKEEEWREAQR-GFNKVWREQNEKYYLKSLDHQGINF 737
Score = 37 (18.1 bits), Expect = 3.6e-32, Sum P(4) = 3.6e-32
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 448 NDGHVSRSVKIEDKDREHKRE-MEVTKEKDRYKEKY 482
+ G V ++++ D + E+ + +E + D Y E+Y
Sbjct: 1072 SQGQVQLTIELLDTEEENSDDPVEAERWSD-YVERY 1106
>ZFIN|ZDB-GENE-070620-3 [details] [associations]
symbol:sin3aa "SIN3 homolog A, transcription
regulator (yeast) a" species:7955 "Danio rerio" [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
ZFIN:ZDB-GENE-070620-3 GO:GO:0005634 GO:GO:0006355
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 HOVERGEN:HBG060425
OMA:PNQNGCQ OrthoDB:EOG48KR9G GeneTree:ENSGT00390000007239
HOGENOM:HOG000230688 EMBL:CU207224 EMBL:BC139856 IPI:IPI00484779
RefSeq:NP_001091650.1 UniGene:Dr.79679 SMR:A5D6S0 STRING:A5D6S0
Ensembl:ENSDART00000083539 GeneID:563090 KEGG:dre:563090 CTD:563090
NextBio:20884735 Uniprot:A5D6S0
Length = 1276
Score = 481 (174.4 bits), Expect = 3.7e-97, Sum P(6) = 3.7e-97
Identities = 119/335 (35%), Positives = 182/335 (54%)
Query: 479 KEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSED 538
KE+ E+D ++C+R SYR LP Y +P + R+ + +VLND WVS S SED
Sbjct: 538 KERATEGIAMEIDYASCKRLGSSYRALPKSYQLPKCTGRTAICKEVLNDTWVSFPSWSED 597
Query: 539 YSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLK 598
+F ++ QYEE ++RCED+RFELD++LE+ +T + E ++ + F L
Sbjct: 598 STFVSSKKTQYEEHMYRCEDERFELDVVLETNLATIRVLETTQKKLSRMSAEEQAKFRLD 657
Query: 599 DH---FSAL-NLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFN 654
+ FS + + + I+R+YGD D++D L+KNPA ++P++L RLK K+EEW + + FN
Sbjct: 658 NTLGGFSEIIHRKAIQRIYGDKAPDIIDGLKKNPAASVPIVLKRLKLKEEEWREAQRGFN 717
Query: 655 KVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQ-FKENK-QTEDDVLFVIAA 712
K+W E K + KSLDH+ FKQ D+K L +K+L+ EI+ F E + Q +D A+
Sbjct: 718 KIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIESIFDERQEQVSEDNSSTTAS 777
Query: 713 GHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCS-TKDQLNKAMKLWTTFLEPMLSVP 771
PHL Y D I ED L+ + + S K+ K ++ F+ ML
Sbjct: 778 S------PHLTLTYEDHQILEDAAALIIHHVKRQSSINKEDKYKIKQIVYHFIPDMLFAQ 831
Query: 772 SRP-SDVEGAE-------DAGKAR-HSGKNNSASS 797
SDVE + D G ++ H+G AS+
Sbjct: 832 RGVLSDVEEEDEEEDMELDEGASKKHNGLAGGASA 866
Score = 226 (84.6 bits), Expect = 3.7e-97, Sum P(6) = 3.7e-97
Identities = 43/80 (53%), Positives = 59/80 (73%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
Q+L DAL+YL +VK F +Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH +L
Sbjct: 119 QRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178
Query: 134 IFGFNTFLPKGYEITLDEDE 153
I GFNTFLP GY+I + ++
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198
Score = 193 (73.0 bits), Expect = 3.7e-97, Sum P(6) = 3.7e-97
Identities = 45/96 (46%), Positives = 59/96 (61%)
Query: 154 APP---KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINE-------- 202
APP + VEF AI +VNKIK RF ++YKSFLEIL+ Y+KE ++ E
Sbjct: 296 APPLQNNQPVEFNHAINYVNKIKNRFQGQPNIYKSFLEILHKYQKEQRNAKEAGGSYTPV 355
Query: 203 -----VYSEVASLFEDHADLLEEFTRFLPDTSATSL 233
VY+EVA LF++ DLL EF +FLPD ++T L
Sbjct: 356 LTEQEVYAEVAQLFKNQEDLLSEFGQFLPDANSTML 391
Score = 182 (69.1 bits), Expect = 3.7e-97, Sum P(6) = 3.7e-97
Identities = 54/211 (25%), Positives = 99/211 (46%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K T +++ + + D Y+ F+ + NLLDG+++ +++ED R + +Y+ FT
Sbjct: 944 KNENTAVQLRLKEPMDVEVEDYYSAFLEMVRNLLDGNMEASQYEDSLREMFTIHAYIAFT 1003
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEE--SRKPGK--------QIDSVYYENARV 1273
+DKL+ + +QLQ + ++E+ ++ +LY E S G Q ++ Y A
Sbjct: 1004 MDKLIQNIARQLQHIVSEEICVQVTELYLVESGHSSTGGSLLTQSSRAQAEASYQRKAEQ 1063
Query: 1274 LLHEENIYRIQLSSSPS--RLSIQLMDNVIEKPEA-FAVTMDPNFAA-YLLNDFLSAFLG 1329
L+ +EN +++ S +L+++L+D E + + ++ YL DF S L
Sbjct: 1064 LMSDENCFKLMFLKSRGNVQLTVELLDTEEENSDGPMEIERWSDYVMRYLSADFTSPDLK 1123
Query: 1330 KK-EPHAVVLRRNKRRFEGLDELSAACMAME 1359
V L RN RR + C A E
Sbjct: 1124 DHLSQKPVFLPRNLRRIR---KCQRGCEAQE 1151
Score = 127 (49.8 bits), Expect = 2.9e-71, Sum P(5) = 2.9e-71
Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLE 219
++ E+A+++++++K +F N VY FL+I+ ++ + D V S V+ LF+ H DL+
Sbjct: 121 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180
Query: 220 EFTRFLP 226
F FLP
Sbjct: 181 GFNTFLP 187
Score = 103 (41.3 bits), Expect = 5.8e-89, Sum P(6) = 5.8e-89
Identities = 42/166 (25%), Positives = 64/166 (38%)
Query: 1262 QIDSVYYENARVLLHEENIYRIQLSSSPS--RLSIQLMDNVIEKPEA-FAVTMDPNFAA- 1317
Q ++ Y A L+ +EN +++ S +L+++L+D E + + ++
Sbjct: 1052 QAEASYQRKAEQLMSDENCFKLMFLKSRGNVQLTVELLDTEEENSDGPMEIERWSDYVMR 1111
Query: 1318 YLLNDFLSAFLGKK-EPHAVVLRRNKRRFEGLDELSAACMAME-----GVQLVNG----L 1367
YL DF S L V L RN RR + C A E G + N +
Sbjct: 1112 YLSADFTSPDLKDHLSQKPVFLPRNLRRIR---KCQRGCEAQEKELKDGERKENADSMKM 1168
Query: 1368 ECRIACNSYKITYVLDTEDVFYXXXXXXXXXXXSSHYNQARVLRFH 1413
EC NSYK+ YV +ED Y + RFH
Sbjct: 1169 ECMFKLNSYKMVYVFKSEDYMYRRTALLRAHQSHERVSTRLHQRFH 1214
Score = 100 (40.3 bits), Expect = 3.7e-97, Sum P(6) = 3.7e-97
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 371 IFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+F +KV++ L S + Y FL+CL I++ II R +L LV LGK+ +L F +F
Sbjct: 468 LFFEKVRKVLRSAEAYDNFLRCLVIFNEEIISRAELVQLVVPFLGKFPELFTWFKNF 524
Score = 87 (35.7 bits), Expect = 4.8e-67, Sum P(5) = 4.8e-67
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDF-KAQRT--DTAG----------V 119
+Q + + A+ Y+ ++K+ FQ Q Y FLE++ + K QR + G V
Sbjct: 302 NQPVEFNHAINYVNKIKNRFQGQPNIYKSFLEILHKYQKEQRNAKEAGGSYTPVLTEQEV 361
Query: 120 IARVKDLFKGHNNLIFGFNTFLP 142
A V LFK +L+ F FLP
Sbjct: 362 YAEVAQLFKNQEDLLSEFGQFLP 384
Score = 69 (29.3 bits), Expect = 3.7e-97, Sum P(6) = 3.7e-97
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 1088 ESEGEAD-GMADQHF-VGGDCMSLPMSERFLLSVKPLAKFVPATSVEERKDCRVFYGNDD 1145
E + E D G + +H + G + P + L S + S E+ + +FY N++
Sbjct: 844 EEDMELDEGASKKHNGLAGGASASPTKSKLLFSASTAQRL---RSCEDAYN--LFYVNNN 898
Query: 1146 FYVLFRLHQTLYERI 1160
+Y+ RLHQ L R+
Sbjct: 899 WYIFLRLHQILCSRL 913
Score = 57 (25.1 bits), Expect = 4.6e-77, Sum P(5) = 4.6e-77
Identities = 27/126 (21%), Positives = 52/126 (41%)
Query: 366 YNQGFIFCDKVKEKLCSDD--YQAFLKCLHIY---------SNG----IIKRNDLQNLVT 410
+N + +K+K + Y++FL+ LH Y + G ++ ++ V
Sbjct: 307 FNHAINYVNKIKNRFQGQPNIYKSFLEILHKYQKEQRNAKEAGGSYTPVLTEQEVYAEVA 366
Query: 411 DLLGKYMDLMDEFNHFFERCENIDGFLAGVMSKK--SLCND-GHVSRSVKIEDKDREHKR 467
L DL+ EF F N L ++K S+ ND G + ++ +K R ++
Sbjct: 367 QLFKNQEDLLSEFGQFLPDA-NSTMLLGKTTAEKAESVRNDHGGTVKKPQLNNKQRPNQN 425
Query: 468 EMEVTK 473
++ K
Sbjct: 426 GCQIRK 431
Score = 47 (21.6 bits), Expect = 6.7e-63, Sum P(5) = 6.7e-63
Identities = 16/71 (22%), Positives = 30/71 (42%)
Query: 120 IARVKDLFKGHNNLIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHND 179
+ ++K+ F+G N+ F L K + + EA T E + ++ + F N
Sbjct: 314 VNKIKNRFQGQPNIYKSFLEILHKYQKEQRNAKEAGGSYTPVLTEQEVYA-EVAQLFKNQ 372
Query: 180 EHVYKSFLEIL 190
E + F + L
Sbjct: 373 EDLLSEFGQFL 383
Score = 46 (21.3 bits), Expect = 3.9e-28, Sum P(3) = 3.9e-28
Identities = 25/104 (24%), Positives = 44/104 (42%)
Query: 1255 ESRKPGKQIDSVYYENARVLLHEENIYRIQLSSSPSRLSIQLMDNVIEKPEAFAVTMDPN 1314
E+ K G +S+++E R +L Y L R + + +I + E + + P
Sbjct: 457 EAGKHGGGTESLFFEKVRKVLRSAEAYDNFL-----RCLVIFNEEIISRAELVQLVV-PF 510
Query: 1315 FAAYL-LNDFLSAFLGKKEPHAVVLRRNKRRFEGLD-ELS-AAC 1355
+ L + FLG KE + +R EG+ E+ A+C
Sbjct: 511 LGKFPELFTWFKNFLGYKEMSHLETYPKERATEGIAMEIDYASC 554
Score = 44 (20.5 bits), Expect = 8.6e-57, Sum P(4) = 8.6e-57
Identities = 18/75 (24%), Positives = 31/75 (41%)
Query: 84 YLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTFLPK 143
+ ++V+ + + E YD FL + F + A ++ V L F FL
Sbjct: 469 FFEKVRKVLRSA-EAYDNFLRCLVIFNEEIISRAELVQLVVPFLGKFPELFTWFKNFL-- 525
Query: 144 GYEITLDEDEAPPKK 158
GY+ + E PK+
Sbjct: 526 GYK-EMSHLETYPKE 539
Score = 43 (20.2 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 26/103 (25%), Positives = 42/103 (40%)
Query: 786 ARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTELNNLCRTALSNGDTIT 845
A HSG ++ + ++ P G + P +S G + L ALS D +
Sbjct: 78 AVHSGPHHHGPAAAQAHAPPPVQGHAHPPTPSASTQGQQQFQ-RLK--VEDALSYLDQV- 133
Query: 846 KENVLDSDRVYRDDLSCSALQLEKEQKNVDISDKRSGIIIQVA 888
K + +VY D L + KE K+ I G+I +V+
Sbjct: 134 KLQFGNQPQVYND-----FLDIMKEFKSQSIDTP--GVISRVS 169
Score = 39 (18.8 bits), Expect = 3.8e-18, Sum P(3) = 3.8e-18
Identities = 11/56 (19%), Positives = 24/56 (42%)
Query: 180 EHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSH 235
E Y +FLE++ + + ++ + +F HA + + + + A L H
Sbjct: 963 EDYYSAFLEMVRNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKLIQNI-ARQLQH 1017
Score = 37 (18.1 bits), Expect = 2.3e-43, Sum P(5) = 2.3e-43
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 331 LQRFPDKKKSIKKVEGFGANSSLASYDDKDALKSIYNQGFIF 372
L+R K++ ++ + G N ++K LKS+ +QG F
Sbjct: 699 LKRLKLKEEEWREAQR-GFNKIWREQNEKYYLKSLDHQGINF 739
>MGI|MGI:107157 [details] [associations]
symbol:Sin3a "transcriptional regulator, SIN3A (yeast)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IGI]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0000785 "chromatin"
evidence=ISO] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IGI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0002218 "activation of innate immune
response" evidence=ISO] [GO:0002230 "positive regulation of defense
response to virus by host" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0006260 "DNA replication"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007568 "aging" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0010243 "response
to organic nitrogen" evidence=ISO] [GO:0010971 "positive regulation
of G2/M transition of mitotic cell cycle" evidence=IMP] [GO:0016580
"Sin3 complex" evidence=ISO] [GO:0017053 "transcriptional repressor
complex" evidence=IDA;IPI] [GO:0031937 "positive regulation of
chromatin silencing" evidence=ISO] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051595 "response to
methylglyoxal" evidence=IDA] [GO:0071333 "cellular response to
glucose stimulus" evidence=IDA] [GO:1900181 "negative regulation of
protein localization to nucleus" evidence=ISO] [GO:1901675
"negative regulation of histone H3-K27 acetylation" evidence=ISO]
[GO:2000678 "negative regulation of transcription regulatory region
DNA binding" evidence=ISO] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 MGI:MGI:107157 GO:GO:0017053 GO:GO:0043066
GO:GO:0005730 GO:GO:0000776 GO:GO:0034613 GO:GO:0071333
GO:GO:0003677 GO:GO:0006260 GO:GO:0007568 GO:GO:0001701
GO:GO:0003700 GO:GO:0003682 GO:GO:0005667 GO:GO:0010243
GO:GO:0051595 GO:GO:0001106 GO:GO:0043619 GO:GO:0016580
Gene3D:1.20.1160.11 SUPFAM:SSF47762 PDB:1S5R PDBsum:1S5R
GO:GO:0051329 PDB:1G1E PDB:1S5Q PDBsum:1G1E PDBsum:1S5Q PDB:2L9S
PDBsum:2L9S eggNOG:COG5602 KO:K11644 InterPro:IPR013194
Pfam:PF08295 SMART:SM00761 PDB:2RMS PDBsum:2RMS PDB:2LD7
PDBsum:2LD7 CTD:25942 HOVERGEN:HBG060425 OMA:PNQNGCQ
OrthoDB:EOG48KR9G EMBL:L36831 EMBL:U22394 EMBL:AK220292
EMBL:BC052716 EMBL:BC053385 EMBL:L38620 EMBL:L38621 IPI:IPI00276051
IPI:IPI00985713 PIR:A56068 PIR:I61713 RefSeq:NP_001103820.1
RefSeq:NP_001103821.1 RefSeq:NP_035508.2 UniGene:Mm.15755 PDB:2RMR
PDBsum:2RMR ProteinModelPortal:Q60520 SMR:Q60520 DIP:DIP-469N
IntAct:Q60520 MINT:MINT-1510506 STRING:Q60520 PhosphoSite:Q60520
PaxDb:Q60520 PRIDE:Q60520 Ensembl:ENSMUST00000049169
Ensembl:ENSMUST00000167715 Ensembl:ENSMUST00000168177
Ensembl:ENSMUST00000168502 Ensembl:ENSMUST00000168678 GeneID:20466
KEGG:mmu:20466 UCSC:uc009ptx.2 UCSC:uc012gtw.1
GeneTree:ENSGT00390000007239 InParanoid:Q570Z7
EvolutionaryTrace:Q60520 NextBio:298567 Bgee:Q60520
CleanEx:MM_SIN3A Genevestigator:Q60520
GermOnline:ENSMUSG00000042557 Uniprot:Q60520
Length = 1274
Score = 495 (179.3 bits), Expect = 8.6e-97, Sum P(6) = 8.6e-97
Identities = 115/313 (36%), Positives = 173/313 (55%)
Query: 479 KEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSED 538
KE+ E+D ++C+R SYR LP Y P + R+ L +VLND WVS S SED
Sbjct: 536 KERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSED 595
Query: 539 YSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLK 598
+F ++ QYEE ++RCED+RFELD++LE+ +T + E + ++ + F L
Sbjct: 596 STFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLD 655
Query: 599 DHFSA----LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFN 654
+ ++ + ++R+Y D D++D LRKNP+IA+P++L RLK K+EEW + + FN
Sbjct: 656 NTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFN 715
Query: 655 KVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQ---TEDDVLFVIA 711
KVW E K + KSLDH+ FKQ D+K L +KSL+ EI+ + +Q TE++
Sbjct: 716 KVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEEN------ 769
Query: 712 AGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSV 770
AG PV PHL Y D I ED L+ + + K+ K ++ F+ +L
Sbjct: 770 AG--VPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFA 827
Query: 771 PSRP-SDVEGAED 782
SDVE E+
Sbjct: 828 QRGDLSDVEEEEE 840
Score = 225 (84.3 bits), Expect = 8.6e-97, Sum P(6) = 8.6e-97
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
Q+L DAL+YL +VK F Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH +L
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178
Query: 134 IFGFNTFLPKGYEITLDEDE 153
I GFNTFLP GY+I + ++
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198
Score = 178 (67.7 bits), Expect = 8.6e-97, Sum P(6) = 8.6e-97
Identities = 51/196 (26%), Positives = 95/196 (48%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K ++ +++ + + D Y F+ + +LLDG+ID++++ED R + +Y+ FT
Sbjct: 938 KSDSPAIQLRLKEPMDVDVEDYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFT 997
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESR-KPGKQI---------DSVYYENARV 1273
+DKL+ + +QLQ + +DE+ ++ LY E + G Q+ +S Y A
Sbjct: 998 MDKLIQSIVRQLQHIVSDEVCVQVTDLYLAENNNGATGGQLNSQTSRSLLESAYQRKAEQ 1057
Query: 1274 LLHEENIYRIQLSSSPSR--LSIQLMDNVIEKPE--AFAVTMDPNFAAYLLNDFLSAFLG 1329
L+ +EN +++ S + L+++L+D E + A Y+ +D S L
Sbjct: 1058 LMSDENCFKLMFIQSQGQVQLTVELLDTEEENSDDPVEAERWSDYVERYMSSDTTSPELR 1117
Query: 1330 KK-EPHAVVLRRNKRR 1344
+ V L RN RR
Sbjct: 1118 EHLAQKPVFLPRNLRR 1133
Score = 176 (67.0 bits), Expect = 8.6e-97, Sum P(6) = 8.6e-97
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 147 ITLDEDEAPP---KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINE- 202
+T+ AP + VEF AI +VNKIK RF +YK+FLEIL+ Y+KE ++ E
Sbjct: 286 VTISLGTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 345
Query: 203 ------------VYSEVASLFEDHADLLEEFTRFLPDTSATSL 233
VY++VA LF++ DLL EF +FLPD +++ L
Sbjct: 346 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVL 388
Score = 122 (48.0 bits), Expect = 3.2e-72, Sum P(5) = 3.2e-72
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLE 219
++ E+A+++++++K +F + VY FL+I+ ++ + D V S V+ LF+ H DL+
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180
Query: 220 EFTRFLP 226
F FLP
Sbjct: 181 GFNTFLP 187
Score = 114 (45.2 bits), Expect = 8.6e-97, Sum P(6) = 8.6e-97
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 352 SLASYDDKDALKSIYNQGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVT 410
SL DA K +F DKV++ L S + Y+ FL+CL I++ +I R +L LV+
Sbjct: 447 SLKESSMADASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVS 506
Query: 411 DLLGKYMDLMDEFNHFFERCENI 433
LGK+ +L + F +F E++
Sbjct: 507 PFLGKFPELFNWFKNFLGYKESV 529
Score = 114 (45.2 bits), Expect = 3.8e-90, Sum P(6) = 3.8e-90
Identities = 39/142 (27%), Positives = 64/142 (45%)
Query: 1263 IDSVYYENARVLLHEENIYRIQLSSSPSR--LSIQLMDNVIEKPE--AFAVTMDPNFAAY 1318
++S Y A L+ +EN +++ S + L+++L+D E + A Y
Sbjct: 1047 LESAYQRKAEQLMSDENCFKLMFIQSQGQVQLTVELLDTEEENSDDPVEAERWSDYVERY 1106
Query: 1319 LLNDFLSAFLGKK-EPHAVVLRRNKRRFE----GLDELSA------ACMAMEGVQLVNGL 1367
+ +D S L + V L RN RR G ++ + ME V+ ++ L
Sbjct: 1107 MSSDTTSPELREHLAQKPVFLPRNLRRIRKCQRGREQQEKEGKEGNSKKTMENVESLDKL 1166
Query: 1368 ECRIACNSYKITYVLDTEDVFY 1389
ECR NSYK+ YV+ +ED Y
Sbjct: 1167 ECRFKLNSYKMVYVIKSEDYMY 1188
Score = 88 (36.0 bits), Expect = 1.2e-68, Sum P(5) = 1.2e-68
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDF-KAQRT--DTAG----------V 119
+Q + + A+ Y+ ++K+ FQ Q + Y FLE++ + K QR + G V
Sbjct: 299 NQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEV 358
Query: 120 IARVKDLFKGHNNLIFGFNTFLP 142
A+V LFK +L+ F FLP
Sbjct: 359 YAQVARLFKNQEDLLSEFGQFLP 381
Score = 58 (25.5 bits), Expect = 8.6e-97, Sum P(6) = 8.6e-97
Identities = 22/70 (31%), Positives = 33/70 (47%)
Query: 1092 EADGMADQHF-VGGDCMSLPMSERFLLSVKPLAKFVPATSVEERKDCRVFYGNDDFYVLF 1150
EA G +H VGG P + L S K ++E + +FY N+++Y+
Sbjct: 847 EATGAPKKHNGVGGS----PPKSKLLFSNTAAQKL---RGMDEVYN--LFYVNNNWYIFM 897
Query: 1151 RLHQTLYERI 1160
RLHQ L R+
Sbjct: 898 RLHQILCLRL 907
Score = 53 (23.7 bits), Expect = 1.4e-76, Sum P(5) = 1.4e-76
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIY 395
+N + +K+K + D Y+AFL+ LH Y
Sbjct: 304 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTY 335
Score = 52 (23.4 bits), Expect = 1.8e-76, Sum P(5) = 1.8e-76
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 168 FVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFL 225
F +K++K + E Y++FL L ++ +E E+ V+ +L F FL
Sbjct: 467 FFDKVRKALRSAE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 523
Score = 42 (19.8 bits), Expect = 1.7e-88, Sum P(6) = 1.7e-88
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 904 AENSHGRTGSEMMSASLR 921
AEN++G TG ++ S + R
Sbjct: 1027 AENNNGATGGQLNSQTSR 1044
Score = 39 (18.8 bits), Expect = 2.9e-56, Sum P(4) = 2.9e-56
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+ D+VK + S Y FL + + + I + + V+ L + DL+ FN F
Sbjct: 129 YLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTF 185
Score = 39 (18.8 bits), Expect = 2.3e-32, Sum P(4) = 2.3e-32
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 448 NDGHVSRSVKIEDKDREHKRE-MEVTKEKDRYKEKYYAKSIQELDL 492
+ G V +V++ D + E+ + +E + D Y E+Y + +L
Sbjct: 1072 SQGQVQLTVELLDTEEENSDDPVEAERWSD-YVERYMSSDTTSPEL 1116
Score = 38 (18.4 bits), Expect = 7.9e-46, Sum P(5) = 7.9e-46
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 446 LCNDGHVSRSVKIEDKDREHKRE-MEVTKEK 475
+C+ R ++ E+++RE +RE + + ++K
Sbjct: 910 ICSQAE--RQIEEENREREWEREVLGIKRDK 938
Score = 38 (18.4 bits), Expect = 4.2e-40, Sum P(5) = 4.2e-40
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 331 LQRFPDKKKSIKKVEGFGANSSLASYDDKDALKSIYNQGFIF 372
L+R K++ ++ + G N ++K LKS+ +QG F
Sbjct: 697 LKRLKMKEEEWREAQR-GFNKVWREQNEKYYLKSLDHQGINF 737
>UNIPROTKB|Q96ST3 [details] [associations]
symbol:SIN3A "Paired amphipathic helix protein Sin3a"
species:9606 "Homo sapiens" [GO:0007568 "aging" evidence=IEA]
[GO:0010243 "response to organic nitrogen" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0034613
"cellular protein localization" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0051329 "interphase
of mitotic cell cycle" evidence=IEA] [GO:0051595 "response to
methylglyoxal" evidence=IEA] [GO:0071333 "cellular response to
glucose stimulus" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=RCA] [GO:0016580
"Sin3 complex" evidence=NAS;IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0044255 "cellular lipid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0001102 "RNA polymerase
II activating transcription factor binding" evidence=IPI]
[GO:0033558 "protein deacetylase activity" evidence=IMP]
[GO:0006476 "protein deacetylation" evidence=IMP] [GO:1900181
"negative regulation of protein localization to nucleus"
evidence=IMP] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=IMP] [GO:1901675 "negative
regulation of histone H3-K27 acetylation" evidence=IMP] [GO:0031937
"positive regulation of chromatin silencing" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0002230 "positive
regulation of defense response to virus by host" evidence=IMP]
[GO:0002218 "activation of innate immune response" evidence=IMP]
Reactome:REACT_604 Reactome:REACT_111217 InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 GO:GO:0017053
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0005730 GO:GO:0000776 GO:GO:0034613 GO:GO:0044281
GO:GO:0071333 GO:GO:0003677 GO:GO:0007596 GO:GO:0006260
GO:GO:0007568 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0044255 GO:GO:0003682 GO:GO:0002230 GO:GO:0005667
GO:GO:0000122 GO:GO:0010243 GO:GO:0002218
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0051595
GO:GO:0001106 GO:GO:0043619 GO:GO:0016580 GO:GO:0031937
GO:GO:2000678 Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0033558
PDB:1PO4 PDBsum:1PO4 GO:GO:0051329 eggNOG:COG5602 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 EMBL:AF418569
EMBL:BC018973 EMBL:BC137098 EMBL:BC137099 EMBL:AK027559
EMBL:AK074903 EMBL:AK096477 EMBL:AY044430 EMBL:AL117513
IPI:IPI00170596 PIR:T17282 RefSeq:NP_001138829.1
RefSeq:NP_001138830.1 RefSeq:NP_056292.1 UniGene:Hs.513039
ProteinModelPortal:Q96ST3 SMR:Q96ST3 IntAct:Q96ST3
MINT:MINT-2815493 STRING:Q96ST3 PhosphoSite:Q96ST3 DMDM:37999759
PaxDb:Q96ST3 PeptideAtlas:Q96ST3 PRIDE:Q96ST3
Ensembl:ENST00000360439 Ensembl:ENST00000394947
Ensembl:ENST00000394949 GeneID:25942 KEGG:hsa:25942 UCSC:uc002bai.3
CTD:25942 GeneCards:GC15M075661 H-InvDB:HIX0012443
H-InvDB:HIX0019634 H-InvDB:HIX0172841 HGNC:HGNC:19353 HPA:CAB004506
MIM:607776 neXtProt:NX_Q96ST3 PharmGKB:PA134993567
HOVERGEN:HBG060425 InParanoid:Q96ST3 OMA:PNQNGCQ OrthoDB:EOG48KR9G
PhylomeDB:Q96ST3 ChiTaRS:SIN3A GenomeRNAi:25942 NextBio:47516
Bgee:Q96ST3 CleanEx:HS_SIN3A Genevestigator:Q96ST3
GermOnline:ENSG00000169375 GO:GO:1901675 GO:GO:1900181
Uniprot:Q96ST3
Length = 1273
Score = 495 (179.3 bits), Expect = 1.4e-96, Sum P(6) = 1.4e-96
Identities = 115/313 (36%), Positives = 173/313 (55%)
Query: 479 KEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSED 538
KE+ E+D ++C+R SYR LP Y P + R+ L +VLND WVS S SED
Sbjct: 535 KERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSED 594
Query: 539 YSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLK 598
+F ++ QYEE ++RCED+RFELD++LE+ +T + E + ++ + F L
Sbjct: 595 STFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLD 654
Query: 599 DHFSA----LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFN 654
+ ++ + ++R+Y D D++D LRKNP+IA+P++L RLK K+EEW + + FN
Sbjct: 655 NTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFN 714
Query: 655 KVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQ---TEDDVLFVIA 711
KVW E K + KSLDH+ FKQ D+K L +KSL+ EI+ + +Q TE++
Sbjct: 715 KVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEEN------ 768
Query: 712 AGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSV 770
AG PV PHL Y D I ED L+ + + K+ K ++ F+ +L
Sbjct: 769 AG--VPVGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFA 826
Query: 771 PSRP-SDVEGAED 782
SDVE E+
Sbjct: 827 QRGDLSDVEEEEE 839
Score = 225 (84.3 bits), Expect = 1.4e-96, Sum P(6) = 1.4e-96
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
Q+L DAL+YL +VK F Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH +L
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178
Query: 134 IFGFNTFLPKGYEITLDEDE 153
I GFNTFLP GY+I + ++
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198
Score = 178 (67.7 bits), Expect = 1.4e-96, Sum P(6) = 1.4e-96
Identities = 52/196 (26%), Positives = 95/196 (48%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K ++ +++ + + D Y F+ + +LLDG+ID++++ED R + +Y+ FT
Sbjct: 937 KSDSPAIQLRLKEPMDVDVEDYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFT 996
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESR-KPGKQI---------DSVYYENARV 1273
+DKL+ + +QLQ + +DE+ ++ LY E + G Q+ +S Y A
Sbjct: 997 MDKLIQSIVRQLQHIVSDEICVQVTDLYLAENNNGATGGQLNTQNSRSLLESTYQRKAEQ 1056
Query: 1274 LLHEENIYRIQLSSSPSR--LSIQLMDNVIEKPE--AFAVTMDPNFAAYLLNDFLSAFLG 1329
L+ +EN +++ S + L+I+L+D E + A Y+ +D S L
Sbjct: 1057 LMSDENCFKLMFIQSQGQVQLTIELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELR 1116
Query: 1330 KK-EPHAVVLRRNKRR 1344
+ V L RN RR
Sbjct: 1117 EHLAQKPVFLPRNLRR 1132
Score = 176 (67.0 bits), Expect = 1.4e-96, Sum P(6) = 1.4e-96
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 147 ITLDEDEAPP---KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINE- 202
+T+ AP + VEF AI +VNKIK RF +YK+FLEIL+ Y+KE ++ E
Sbjct: 286 VTISLGTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 345
Query: 203 ------------VYSEVASLFEDHADLLEEFTRFLPDTSATSL 233
VY++VA LF++ DLL EF +FLPD +++ L
Sbjct: 346 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVL 388
Score = 122 (48.0 bits), Expect = 5.2e-72, Sum P(5) = 5.2e-72
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLE 219
++ E+A+++++++K +F + VY FL+I+ ++ + D V S V+ LF+ H DL+
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180
Query: 220 EFTRFLP 226
F FLP
Sbjct: 181 GFNTFLP 187
Score = 112 (44.5 bits), Expect = 9.7e-90, Sum P(6) = 9.7e-90
Identities = 40/142 (28%), Positives = 63/142 (44%)
Query: 1263 IDSVYYENARVLLHEENIYRIQLSSSPSR--LSIQLMDNVIEKPE--AFAVTMDPNFAAY 1318
++S Y A L+ +EN +++ S + L+I+L+D E + A Y
Sbjct: 1046 LESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTIELLDTEEENSDDPVEAERWSDYVERY 1105
Query: 1319 LLNDFLSAFLGKK-EPHAVVLRRNKRRFE----GLDELSA------ACMAMEGVQLVNGL 1367
+ +D S L + V L RN RR G ++ + ME V ++ L
Sbjct: 1106 MNSDTTSPELREHLAQKPVFLPRNLRRIRKCQRGREQQEKEGKEGNSKKTMENVDSLDKL 1165
Query: 1368 ECRIACNSYKITYVLDTEDVFY 1389
ECR NSYK+ YV+ +ED Y
Sbjct: 1166 ECRFKLNSYKMVYVIKSEDYMY 1187
Score = 111 (44.1 bits), Expect = 1.4e-96, Sum P(6) = 1.4e-96
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 371 IFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFER 429
+F DKV++ L S + Y+ FL+CL I++ +I R +L LV+ LGK+ +L + F +F
Sbjct: 465 LFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGY 524
Query: 430 CENI 433
E++
Sbjct: 525 KESV 528
Score = 88 (36.0 bits), Expect = 2.0e-68, Sum P(5) = 2.0e-68
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDF-KAQRT--DTAG----------V 119
+Q + + A+ Y+ ++K+ FQ Q + Y FLE++ + K QR + G V
Sbjct: 299 NQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEV 358
Query: 120 IARVKDLFKGHNNLIFGFNTFLP 142
A+V LFK +L+ F FLP
Sbjct: 359 YAQVARLFKNQEDLLSEFGQFLP 381
Score = 59 (25.8 bits), Expect = 1.4e-96, Sum P(6) = 1.4e-96
Identities = 22/70 (31%), Positives = 33/70 (47%)
Query: 1092 EADGMADQHF-VGGDCMSLPMSERFLLSVKPLAKFVPATSVEERKDCRVFYGNDDFYVLF 1150
EA G +H VGG P + L S K ++E + +FY N+++Y+
Sbjct: 846 EATGAVKKHNGVGGS----PPKSKLLFSNTAAQKL---RGMDEVYN--LFYVNNNWYIFM 896
Query: 1151 RLHQTLYERI 1160
RLHQ L R+
Sbjct: 897 RLHQILCLRL 906
Score = 53 (23.7 bits), Expect = 1.1e-76, Sum P(5) = 1.1e-76
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIY 395
+N + +K+K + D Y+AFL+ LH Y
Sbjct: 304 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTY 335
Score = 52 (23.4 bits), Expect = 1.4e-76, Sum P(5) = 1.4e-76
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 168 FVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFL 225
F +K++K + E Y++FL L ++ +E E+ V+ +L F FL
Sbjct: 466 FFDKVRKALRSAE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 522
Score = 39 (18.8 bits), Expect = 1.1e-87, Sum P(6) = 1.1e-87
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 904 AENSHGRTGSEMMSASLR 921
AEN++G TG ++ + + R
Sbjct: 1026 AENNNGATGGQLNTQNSR 1043
Score = 39 (18.8 bits), Expect = 2.2e-56, Sum P(4) = 2.2e-56
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+ D+VK + S Y FL + + + I + + V+ L + DL+ FN F
Sbjct: 129 YLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTF 185
Score = 38 (18.4 bits), Expect = 1.6e-45, Sum P(5) = 1.6e-45
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 446 LCNDGHVSRSVKIEDKDREHKRE-MEVTKEK 475
+C+ R ++ E+++RE +RE + + ++K
Sbjct: 909 ICSQAE--RQIEEENREREWEREVLGIKRDK 937
Score = 38 (18.4 bits), Expect = 3.3e-40, Sum P(5) = 3.3e-40
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 331 LQRFPDKKKSIKKVEGFGANSSLASYDDKDALKSIYNQGFIF 372
L+R K++ ++ + G N ++K LKS+ +QG F
Sbjct: 696 LKRLKMKEEEWREAQR-GFNKVWREQNEKYYLKSLDHQGINF 736
Score = 37 (18.1 bits), Expect = 7.4e-32, Sum P(4) = 7.4e-32
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 448 NDGHVSRSVKIEDKDREHKRE-MEVTKEKDRYKEKY 482
+ G V ++++ D + E+ + +E + D Y E+Y
Sbjct: 1071 SQGQVQLTIELLDTEEENSDDPVEAERWSD-YVERY 1105
>UNIPROTKB|E1BX21 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001106 "RNA polymerase II transcription corepressor
activity" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0034613
"cellular protein localization" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0051329
"interphase of mitotic cell cycle" evidence=IEA] [GO:0051595
"response to methylglyoxal" evidence=IEA] [GO:0071333 "cellular
response to glucose stimulus" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0017053
GO:GO:0043066 GO:GO:0000776 GO:GO:0034613 GO:GO:0071333
GO:GO:0003677 GO:GO:0006260 GO:GO:0003700 GO:GO:0003682
GO:GO:0005667 GO:GO:0051595 GO:GO:0001106 GO:GO:0016580
Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0051329
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 OMA:PNQNGCQ
GeneTree:ENSGT00390000007239 EMBL:AADN02074787 EMBL:AADN02074788
EMBL:AADN02074789 IPI:IPI00598520 Ensembl:ENSGALT00000002511
Uniprot:E1BX21
Length = 1269
Score = 492 (178.3 bits), Expect = 1.1e-94, Sum P(6) = 1.1e-94
Identities = 113/313 (36%), Positives = 172/313 (54%)
Query: 479 KEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSED 538
KE+ E+D ++C+R SYR LP Y P + R+ L +VLND WVS S SED
Sbjct: 531 KERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSED 590
Query: 539 YSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLK 598
+F ++ QYEE ++RCED+RFELD++LE+ +T + E + ++ + F L
Sbjct: 591 STFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLD 650
Query: 599 DHFSA----LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFN 654
+ ++ + ++R+Y D D++D LRKNP++A+P++L RLK K+EEW + + FN
Sbjct: 651 NTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFN 710
Query: 655 KVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQ---TEDDVLFVIA 711
KVW E K + KSLDH+ FKQ D+K L +KSL+ EI+ + +Q +ED+
Sbjct: 711 KVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDN------ 764
Query: 712 AGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSV 770
AG P PHL Y D I ED L+ + + K+ K ++ F+ +L
Sbjct: 765 AG--VPTGPHLSLAYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFA 822
Query: 771 P-SRPSDVEGAED 782
SDVE E+
Sbjct: 823 QRGELSDVEEEEE 835
Score = 218 (81.8 bits), Expect = 1.1e-94, Sum P(6) = 1.1e-94
Identities = 42/78 (53%), Positives = 56/78 (71%)
Query: 76 LTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIF 135
L DAL+YL +VK F Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH +LI
Sbjct: 116 LQVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 175
Query: 136 GFNTFLPKGYEITLDEDE 153
GFNTFLP GY+I + ++
Sbjct: 176 GFNTFLPPGYKIEVQTND 193
Score = 176 (67.0 bits), Expect = 1.1e-94, Sum P(6) = 1.1e-94
Identities = 51/196 (26%), Positives = 94/196 (47%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K ++ +++ + + D Y F+ + NLLDG++D++++ED R + +Y+ FT
Sbjct: 933 KSDSPAIQLRLKEPMDIDVEDYYPAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFT 992
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEE----------SRKPGKQIDSVYYENARV 1273
+DKL+ + +QLQ + +DE+ ++ LY E S+ +++ Y A
Sbjct: 993 MDKLIQSIVRQLQHIVSDEICVQVTDLYLSENNNGATGGLLASQSSRNLLEATYQRKAEQ 1052
Query: 1274 LLHEENIYRIQLSSSPSR--LSIQLMDNVIEKPE--AFAVTMDPNFAAYLLNDFLSAFLG 1329
L+ EEN +++ S + L+I+L+D E + A Y+ +D S L
Sbjct: 1053 LMSEENCFKLMFIQSRGQVQLTIELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELR 1112
Query: 1330 KK-EPHAVVLRRNKRR 1344
+ V L RN RR
Sbjct: 1113 EHLAQKPVFLPRNLRR 1128
Score = 174 (66.3 bits), Expect = 1.1e-94, Sum P(6) = 1.1e-94
Identities = 39/87 (44%), Positives = 54/87 (62%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINE-------------VYSE 206
VEF AI +VNKIK RF +YK+FLEIL+ Y+KE ++ E VY++
Sbjct: 297 VEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQ 356
Query: 207 VASLFEDHADLLEEFTRFLPDTSATSL 233
VA LF++ DLL EF +FLPD +++ L
Sbjct: 357 VARLFKNQEDLLSEFGQFLPDANSSVL 383
Score = 123 (48.4 bits), Expect = 3.6e-71, Sum P(5) = 3.6e-71
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLE 219
++ E+A+++++++K +F + VY FL+I+ ++ + D V S V+ LF+ H DL+
Sbjct: 116 LQVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 175
Query: 220 EFTRFLP 226
F FLP
Sbjct: 176 GFNTFLP 182
Score = 112 (44.5 bits), Expect = 4.6e-88, Sum P(6) = 4.6e-88
Identities = 46/175 (26%), Positives = 77/175 (44%)
Query: 1231 LCKQLQTVAADEMDNKLIQ-LYEYEESRKPGKQIDSVYYENARVLLHEENIYRIQLSSSP 1289
+C Q+ + E +N L + SR +++ Y A L+ EEN +++ S
Sbjct: 1012 ICVQVTDLYLSENNNGATGGLLASQSSRN---LLEATYQRKAEQLMSEENCFKLMFIQSR 1068
Query: 1290 SR--LSIQLMDNVIEKPE--AFAVTMDPNFAAYLLNDFLSAFLGKK-EPHAVVLRRNKRR 1344
+ L+I+L+D E + A Y+ +D S L + V L RN RR
Sbjct: 1069 GQVQLTIELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRR 1128
Query: 1345 FE----GLDELSA------ACMAMEGVQLVNGLECRIACNSYKITYVLDTEDVFY 1389
G ++ + +ME V+ ++ LEC+ NSYK+ YV+ +ED Y
Sbjct: 1129 IRKCQRGREQQEKEGKEGNSKKSMENVESLDKLECKFKLNSYKMVYVIKSEDYMY 1183
Score = 106 (42.4 bits), Expect = 1.1e-94, Sum P(6) = 1.1e-94
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 371 IFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFER 429
+F +KV++ L S + Y+ FL+CL I++ +I R +L LV+ LGK+ +L F +F
Sbjct: 461 LFFEKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGY 520
Query: 430 CENI 433
E++
Sbjct: 521 KESV 524
Score = 88 (36.0 bits), Expect = 1.8e-67, Sum P(5) = 1.8e-67
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDF-KAQRT--DTAG----------V 119
+Q + + A+ Y+ ++K+ FQ Q + Y FLE++ + K QR + G V
Sbjct: 294 NQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEV 353
Query: 120 IARVKDLFKGHNNLIFGFNTFLP 142
A+V LFK +L+ F FLP
Sbjct: 354 YAQVARLFKNQEDLLSEFGQFLP 376
Score = 60 (26.2 bits), Expect = 1.1e-94, Sum P(6) = 1.1e-94
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 1092 EADGMADQHF-VGGDCMSLPMSERFLLSVKPLAKFVPATSVEERKDCRVFYGNDDFYVLF 1150
EA G A +H VGG P + + + K S++E + +FY N ++Y+
Sbjct: 842 EATGAAKKHNGVGGS----PPKTKLMFNNTTAQKL---RSMDEVYN--LFYVNSNWYIFM 892
Query: 1151 RLHQTLYERI 1160
RLHQ L R+
Sbjct: 893 RLHQILCLRL 902
Score = 53 (23.7 bits), Expect = 1.6e-75, Sum P(5) = 1.6e-75
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIY 395
+N + +K+K + D Y+AFL+ LH Y
Sbjct: 299 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTY 330
Score = 51 (23.0 bits), Expect = 2.6e-75, Sum P(5) = 2.6e-75
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 168 FVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFL 225
F K++K + E Y++FL L ++ +E E+ V+ +L F FL
Sbjct: 462 FFEKVRKALRSTE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFL 518
Score = 46 (21.3 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 15/65 (23%), Positives = 26/65 (40%)
Query: 97 EKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTFLPKGYEITLDEDEAPP 156
E Y+ FL + F + A ++ V L F FL GY+ ++ + P
Sbjct: 474 EAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFL--GYKESVHMETYPK 531
Query: 157 KKTVE 161
++ E
Sbjct: 532 ERATE 536
Score = 46 (21.3 bits), Expect = 2.5e-25, Sum P(3) = 2.5e-25
Identities = 24/84 (28%), Positives = 37/84 (44%)
Query: 1246 KLIQLYEYE--ESRKPGKQIDSVYYENARVLLHE----ENIYRIQLSSSPSRLS----IQ 1295
KL+ L + E+ K G +S+++E R L EN R + + +S +Q
Sbjct: 439 KLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQ 498
Query: 1296 LMDNVIEK-PEAFAVTMDPNFAAY 1318
L+ + K PE F T NF Y
Sbjct: 499 LVSPFLGKFPELF--TWFKNFLGY 520
Score = 39 (18.8 bits), Expect = 6.0e-56, Sum P(4) = 6.0e-56
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+ D+VK + S Y FL + + + I + + V+ L + DL+ FN F
Sbjct: 124 YLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTF 180
Score = 38 (18.4 bits), Expect = 1.5e-78, Sum P(5) = 1.5e-78
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 904 AENSHGRTGSEMMSASLR 921
+EN++G TG + S S R
Sbjct: 1022 SENNNGATGGLLASQSSR 1039
Score = 38 (18.4 bits), Expect = 3.6e-39, Sum P(5) = 3.6e-39
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 331 LQRFPDKKKSIKKVEGFGANSSLASYDDKDALKSIYNQGFIF 372
L+R K++ ++ + G N ++K LKS+ +QG F
Sbjct: 692 LKRLKMKEEEWREAQR-GFNKVWREQNEKYYLKSLDHQGINF 732
Score = 37 (18.1 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 171 KIKKRFHND-EHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHA 215
++K+ D E Y +FL+++ + D ++ + +F HA
Sbjct: 942 RLKEPMDIDVEDYYPAFLDMVRNLLDGNMDSSQYEDSLREMFTIHA 987
>UNIPROTKB|J9NXS4 [details] [associations]
symbol:SIN3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 EMBL:AAEX03012305
Ensembl:ENSCAFT00000049746 Uniprot:J9NXS4
Length = 1127
Score = 498 (180.4 bits), Expect = 1.3e-94, Sum P(7) = 1.3e-94
Identities = 125/349 (35%), Positives = 184/349 (52%)
Query: 488 QELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRN 547
+E+D ++C+R SYR LP Y P S R+ + +VLND WVS S SED +F ++
Sbjct: 389 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 448
Query: 548 QYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFSA---- 603
YEE L RCED+RFELD++LE+ +T + E + ++ + F L D
Sbjct: 449 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSEV 508
Query: 604 LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAK 663
+ R I R+YGD ++++ L+KNP A+PV+L RLK K+EEW + + FNK+W E Y K
Sbjct: 509 IQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 568
Query: 664 NHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVI-PHL 722
+ KSLDH++ FKQ D+K L +KSL+ EI+ + Q + + G P PHL
Sbjct: 569 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQH------SEGRSAPSSEPHL 622
Query: 723 EYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSVPSRPSDVEGAE 781
+ Y D I ED L+ Y + + K+ +L F+ P L S+ D+ +E
Sbjct: 623 IFVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLVHQFV-PSLFF-SQQLDLGASE 680
Query: 782 D-AGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTE 829
D A ++R S + SA +PGP S P G E +TE
Sbjct: 681 DSADESRGSPQGQSADPGDRKKPAPGPQ----SSPPEEKGPVGEAPATE 725
Score = 191 (72.3 bits), Expect = 1.3e-94, Sum P(7) = 1.3e-94
Identities = 39/73 (53%), Positives = 48/73 (65%)
Query: 80 DALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNT 139
DALTYL +VK F Y+ FLE+MK+FK+Q DT GVI RV LF H +LI GFN
Sbjct: 45 DALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNA 104
Query: 140 FLPKGYEITLDED 152
FLP GY I + ++
Sbjct: 105 FLPLGYRIDIPKN 117
Score = 185 (70.2 bits), Expect = 1.3e-94, Sum P(7) = 1.3e-94
Identities = 44/108 (40%), Positives = 63/108 (58%)
Query: 150 DEDEAPPKK-TVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDIN------- 201
D+ + P + +VEF AI++VNKIK RF + +Y+SFLEIL+ Y+KE
Sbjct: 151 DKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGM 210
Query: 202 ---EVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQR 246
EV++EVA+LF DLL EF +FLP+ + + N P NS Q+
Sbjct: 211 SEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSVQK 258
Score = 152 (58.6 bits), Expect = 1.3e-94, Sum P(7) = 1.3e-94
Identities = 39/147 (26%), Positives = 74/147 (50%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K N E++ + E + Y F+ + +LL+GSID ++ED R + +YV FT
Sbjct: 792 KANDPAMELRLKQPSEVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFT 851
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESR-KPGKQIDS---------VYYENARV 1273
+DKL+ + +QL + +D++ K+++LY E+ R G + S Y A
Sbjct: 852 MDKLVQSIARQLHHLVSDDVCLKVVELYLNEKKRGAAGGNLSSRCVRAARETSYQWKAER 911
Query: 1274 LLHEENIYRIQLSSSPSR--LSIQLMD 1298
+ +EN +++ + ++I+L+D
Sbjct: 912 CMADENCFKVMFLQRKGQVIMTIELLD 938
Score = 133 (51.9 bits), Expect = 1.6e-73, Sum P(6) = 1.6e-73
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 157 KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHAD 216
K V E+A+T+++++K RF +D Y FLEI+ ++ + D V V+ LF +H D
Sbjct: 38 KLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPD 97
Query: 217 LLEEFTRFLP 226
L+ F FLP
Sbjct: 98 LIVGFNAFLP 107
Score = 106 (42.4 bits), Expect = 1.3e-94, Sum P(7) = 1.3e-94
Identities = 31/90 (34%), Positives = 50/90 (55%)
Query: 368 QGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
Q F F DKV+ L S + Y+ FL+C+ +++ ++ ++L LV+ LGK+ +L +F F
Sbjct: 308 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 367
Query: 427 FERCENIDGFLAGVMSKKSLCNDGHVSRSV 456
E F A MS +S DG +SR +
Sbjct: 368 LGVKEL--SF-APPMSDRS--GDG-ISREI 391
Score = 98 (39.6 bits), Expect = 7.9e-70, Sum P(6) = 7.9e-70
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAG----------VIAR 122
S + ++A++Y+ ++K F D E Y FLE++ ++ ++ T G V
Sbjct: 159 SDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTE 218
Query: 123 VKDLFKGHNNLIFGFNTFLPK 143
V +LF+G +L+ F FLP+
Sbjct: 219 VANLFRGQEDLLSEFGQFLPE 239
Score = 66 (28.3 bits), Expect = 1.3e-94, Sum P(7) = 1.3e-94
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 1139 VFYGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKE 1179
+F+ N+++Y RLHQTL R+ ++ RT KE
Sbjct: 740 LFFANNNWYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKE 780
Score = 60 (26.2 bits), Expect = 9.1e-75, Sum P(6) = 9.1e-75
Identities = 14/62 (22%), Positives = 32/62 (51%)
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTR 223
+ +F +K+++ + E VY++FL + ++ +E +E+ V+ +L +F
Sbjct: 308 QEFSFFDKVRRVLKSQE-VYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKS 366
Query: 224 FL 225
FL
Sbjct: 367 FL 368
Score = 59 (25.8 bits), Expect = 1.3e-94, Sum P(7) = 1.3e-94
Identities = 9/40 (22%), Positives = 24/40 (60%)
Query: 1350 ELSAACMAMEGVQLVNGLECRIACNSYKITYVLDTEDVFY 1389
E ++ + GV+ ++CR +++K+ +++++ED Y
Sbjct: 1002 EAKSSWKRLVGVESACNVDCRFKLSTHKMMFIVNSEDYMY 1041
Score = 59 (25.8 bits), Expect = 5.2e-59, Sum P(5) = 5.2e-59
Identities = 27/111 (24%), Positives = 45/111 (40%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFER 429
+ D+VK + SD Y FL+ + + + I + V+ L ++ DL+ FN F
Sbjct: 49 YLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPL 108
Query: 430 CENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKE 480
ID + K N + + +D H E K++ YKE
Sbjct: 109 GYRID------IPKNGKLN---IQSPLSSQDSSHNHSDCAENFKQQMLYKE 150
Score = 51 (23.0 bits), Expect = 7.8e-74, Sum P(6) = 7.8e-74
Identities = 25/124 (20%), Positives = 49/124 (39%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIYSNGII--KRNDLQNL--------VTDLL 413
+N + +K+K + + Y++FL+ LH Y + K + + V +L
Sbjct: 164 FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLF 223
Query: 414 GKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTK 473
DL+ EF F + + + C V +S EH++ +E +K
Sbjct: 224 RGQEDLLSEFGQFLPEAKR------SLFTGNGPCEMNSVQKS--------EHEKNLEHSK 269
Query: 474 EKDR 477
++ R
Sbjct: 270 KRSR 273
Score = 43 (20.2 bits), Expect = 1.4e-23, Sum P(5) = 1.4e-23
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 808 DGTVNSRQPISSGNGDENTSTELNNLCRTALSNGDTITKENV-LDSDRV 855
+G +N + P+SS + N S N + L D K V L+SD V
Sbjct: 117 NGKLNIQSPLSSQDSSHNHSDCAENFKQQMLYKED---KPQVPLESDSV 162
Score = 42 (19.8 bits), Expect = 1.7e-23, Sum P(5) = 1.7e-23
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 820 GNGDENTSTELNNLCRTALSNGDTITK--ENVLDSDR-VYRDDLSC--SALQLEKEQKNV 874
G +E TE+ NL R D +++ + + ++ R ++ + C +++Q + +KN+
Sbjct: 209 GMSEEEVFTEVANLFR---GQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSVQKSEHEKNL 265
Query: 875 DISDKRS 881
+ S KRS
Sbjct: 266 EHSKKRS 272
Score = 38 (18.4 bits), Expect = 1.7e-37, Sum P(6) = 1.7e-37
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 849 VLDSDRVYRDDLSCSAL 865
VL S VY + L C AL
Sbjct: 319 VLKSQEVYENFLRCIAL 335
>ZFIN|ZDB-GENE-030131-2066 [details] [associations]
symbol:sin3ab "SIN3 homolog A, transcription
regulator (yeast) b" species:7955 "Danio rerio" [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 ZFIN:ZDB-GENE-030131-2066 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 EMBL:BX663612 IPI:IPI00802882
Ensembl:ENSDART00000083555 Uniprot:E7F0R9
Length = 1264
Score = 480 (174.0 bits), Expect = 1.5e-93, Sum P(6) = 1.5e-93
Identities = 123/370 (33%), Positives = 194/370 (52%)
Query: 479 KEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSED 538
KE+ E+D ++C+R SYR LP + P + R+ L +VLND WVS S SED
Sbjct: 531 KERATEGIAMEIDYASCKRLGSSYRALPKSFQQPRCTGRTPLCKEVLNDTWVSFPSWSED 590
Query: 539 YSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLK 598
+F ++ QYEE ++RCED+RFELD++LE+ +T + E + I+ + F L
Sbjct: 591 STFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAVQKRISRMSAEEQAKFRLD 650
Query: 599 DHFSA----LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFN 654
+ ++ + I+R+YGD D++D L+ NPA+++P++L RLK K+EEW + + FN
Sbjct: 651 NTIGGSSEVIHRKAIQRIYGDKAPDIIDGLKTNPAVSVPIVLKRLKIKEEEWREAQRGFN 710
Query: 655 KVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQ---TEDDVLFVIA 711
K+W E K + KSLDH+ FKQ D+K +K+L+ EI+ + +Q +ED+ +
Sbjct: 711 KIWREQNEKYYLKSLDHQGINFKQNDTKVFRSKTLLNEIETLYDERQEQASEDNA--AVP 768
Query: 712 AGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSV 770
+G PH+ Y DS I ED L+ + + KD K ++ F+ ML
Sbjct: 769 SG------PHMTLMYEDSQILEDAAALIIHHVKRQSGIHKDDKYKIKQIIYHFIPDMLFA 822
Query: 771 P-SRPSDVEGAEDA-------GKARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGNG 822
SDVE ++ G +H+G +S S ++ S T S+Q +SS +
Sbjct: 823 RRGELSDVEEEDEEETEPDEDGTKKHNGTTSSKSKLLFSH-------TAASQQKLSSCDD 875
Query: 823 DENTSTELNN 832
N NN
Sbjct: 876 AYNLFFVNNN 885
Score = 226 (84.6 bits), Expect = 1.5e-93, Sum P(6) = 1.5e-93
Identities = 43/80 (53%), Positives = 59/80 (73%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
Q+L DAL+YL +VK F +Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH +L
Sbjct: 113 QRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 172
Query: 134 IFGFNTFLPKGYEITLDEDE 153
I GFNTFLP GY+I + ++
Sbjct: 173 IMGFNTFLPPGYKIEVQTND 192
Score = 180 (68.4 bits), Expect = 1.5e-93, Sum P(6) = 1.5e-93
Identities = 41/87 (47%), Positives = 54/87 (62%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINE-------------VYSE 206
VEF AI +VNKIK RF VYKSFLEIL+ Y+KE ++ E VY++
Sbjct: 299 VEFNHAINYVNKIKNRFQGQPEVYKSFLEILHTYQKEQRNAKEAGGNYTPTLTEQQVYAQ 358
Query: 207 VASLFEDHADLLEEFTRFLPDTSATSL 233
VA LF++ DLL EF +FLPD +++ L
Sbjct: 359 VAQLFKNQEDLLSEFGQFLPDANSSVL 385
Score = 165 (63.1 bits), Expect = 1.5e-93, Sum P(6) = 1.5e-93
Identities = 49/197 (24%), Positives = 98/197 (49%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K ++ +++ + + D Y+ F+ + NLLDG+++ +++ED+ R + +Y+ FT
Sbjct: 931 KNDSPAIQLRLKEPMDIEVEDYYSAFLEMVRNLLDGNMETSQYEDQLREMFTIHAYIAFT 990
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESRKP-GKQI---------DSVYYENARV 1273
+DKL+ + +QLQ + +D++ ++ LY E + K G + ++ Y +
Sbjct: 991 MDKLIQSIVRQLQHIVSDDICVQVTDLYLSECANKATGGSLSTQSSRSNAETSYQRKSEQ 1050
Query: 1274 LLHEENIYRI--QLSSSPSRLSIQLMDNVIEKPEAFAVTMD-PNFAA-YLLNDFLSAFLG 1329
L+ +EN +++ Q S +L+++L+D E + T P++ YL S L
Sbjct: 1051 LMSDENCFKLLFQKSKGTVQLAVELLDTEEENSDGPVDTERWPDYVERYLNTSSASPELR 1110
Query: 1330 KKEPHAVVL--RRNKRR 1344
+ V RRN RR
Sbjct: 1111 EHLSQKPVFLPRRNLRR 1127
Score = 127 (49.8 bits), Expect = 6.0e-69, Sum P(5) = 6.0e-69
Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLE 219
++ E+A+++++++K +F N VY FL+I+ ++ + D V S V+ LF+ H DL+
Sbjct: 115 LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 174
Query: 220 EFTRFLP 226
F FLP
Sbjct: 175 GFNTFLP 181
Score = 114 (45.2 bits), Expect = 1.5e-93, Sum P(6) = 1.5e-93
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 371 IFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF--F 427
+F +KV++ L S + Y FL+CL I++ +I R +L LV LGK+ +L F +F +
Sbjct: 461 LFFEKVRKALRSSEAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFTWFKNFLGY 520
Query: 428 ERCENIDGF 436
C +I+ F
Sbjct: 521 RECAHIESF 529
Score = 96 (38.9 bits), Expect = 1.0e-65, Sum P(5) = 1.0e-65
Identities = 31/109 (28%), Positives = 50/109 (45%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDF-KAQRT--DTAG----------V 119
+Q + + A+ Y+ ++K+ FQ Q E Y FLE++ + K QR + G V
Sbjct: 296 NQPVEFNHAINYVNKIKNRFQGQPEVYKSFLEILHTYQKEQRNAKEAGGNYTPTLTEQQV 355
Query: 120 IARVKDLFKGHNNLIFGFNTFLPKGYE-ITLDEDEAPPKKTVEFEEAIT 167
A+V LFK +L+ F FLP + L + A + V + T
Sbjct: 356 YAQVAQLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAEAVRIDHGGT 404
Score = 84 (34.6 bits), Expect = 3.7e-85, Sum P(6) = 3.7e-85
Identities = 44/176 (25%), Positives = 73/176 (41%)
Query: 1231 LCKQLQTVAADEMDNKLIQLYEYEESRKPGKQIDSVYYENARVLLHEENIYRI--QLSSS 1288
+C Q+ + E NK +S + ++ Y + L+ +EN +++ Q S
Sbjct: 1010 ICVQVTDLYLSECANKATGGSLSTQSSR--SNAETSYQRKSEQLMSDENCFKLLFQKSKG 1067
Query: 1289 PSRLSIQLMDNVIEKPEAFAVTMD-PNFAAYLLNDF-----LSAFLGKKEPHAVVLRRNK 1342
+L+++L+D E + T P++ LN L L +K P + RRN
Sbjct: 1068 TVQLAVELLDTEEENSDGPVDTERWPDYVERYLNTSSASPELREHLSQK-P-VFLPRRNL 1125
Query: 1343 RRFEGLD---ELS------AACMAMEGVQLVNGLECRIACNSYKITYVLDTEDVFY 1389
RR E+ A + EG + +EC NSYK+ YV +ED Y
Sbjct: 1126 RRIRKCQRGQEMQMREAKETAKKSSEGGD-DSKMECMFKLNSYKMVYVFKSEDYMY 1180
Score = 51 (23.0 bits), Expect = 1.5e-93, Sum P(6) = 1.5e-93
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 1128 ATSVEERKDC----RVFYGNDDFYVLFRLHQTLYERI 1160
A S ++ C +F+ N+++Y+ RLH L R+
Sbjct: 864 AASQQKLSSCDDAYNLFFVNNNWYIFLRLHYILCSRL 900
Score = 46 (21.3 bits), Expect = 3.2e-72, Sum P(5) = 3.2e-72
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 366 YNQGFIFCDKVKEKLCSDD--YQAFLKCLHIY 395
+N + +K+K + Y++FL+ LH Y
Sbjct: 301 FNHAINYVNKIKNRFQGQPEVYKSFLEILHTY 332
Score = 45 (20.9 bits), Expect = 3.5e-53, Sum P(4) = 3.5e-53
Identities = 19/89 (21%), Positives = 32/89 (35%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNN 132
+ KL + ++V+ + E YD FL + F + A ++ V
Sbjct: 451 ASKLGIGAESLFFEKVRKALRSS-EAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPE 509
Query: 133 LIFGFNTFLPKGYEITLDEDEAPPKKTVE 161
L F FL GY + P ++ E
Sbjct: 510 LFTWFKNFL--GYRECAHIESFPKERATE 536
Score = 39 (18.8 bits), Expect = 6.6e-33, Sum P(4) = 6.6e-33
Identities = 14/56 (25%), Positives = 22/56 (39%)
Query: 533 TSGS-EDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINEN 587
T GS S + Y+ + D +L + T + A ELL++ EN
Sbjct: 1027 TGGSLSTQSSRSNAETSYQRKSEQLMSDENCFKLLFQKSKGTVQLAVELLDTEEEN 1082
Score = 39 (18.8 bits), Expect = 4.4e-26, Sum P(3) = 4.4e-26
Identities = 25/104 (24%), Positives = 42/104 (40%)
Query: 1255 ESRKPGKQIDSVYYENARVLLHEENIYRIQLSSSPSRLSIQLMDNVIEKPEAFAVTMDPN 1314
E+ K G +S+++E R L Y L R + VI + E + + P
Sbjct: 450 EASKLGIGAESLFFEKVRKALRSSEAYDNFL-----RCLVIFNQEVISRAELVQLVL-PF 503
Query: 1315 FAAYL-LNDFLSAFLGKKEPHAVVLRRNKRRFEGLD-ELS-AAC 1355
+ L + FLG +E + +R EG+ E+ A+C
Sbjct: 504 LGKFPELFTWFKNFLGYRECAHIESFPKERATEGIAMEIDYASC 547
Score = 39 (18.8 bits), Expect = 3.2e-16, Sum P(3) = 3.2e-16
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 180 EHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHA 215
E Y +FLE++ + + ++ ++ +F HA
Sbjct: 950 EDYYSAFLEMVRNLLDGNMETSQYEDQLREMFTIHA 985
Score = 38 (18.4 bits), Expect = 1.3e-38, Sum P(5) = 1.3e-38
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 331 LQRFPDKKKSIKKVEGFGANSSLASYDDKDALKSIYNQGFIF 372
L+R K++ ++ + G N ++K LKS+ +QG F
Sbjct: 692 LKRLKIKEEEWREAQR-GFNKIWREQNEKYYLKSLDHQGINF 732
>UNIPROTKB|F1NMJ8 [details] [associations]
symbol:SIN3B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000805 "X chromosome" evidence=IEA] [GO:0000806 "Y
chromosome" evidence=IEA] [GO:0001741 "XY body" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0030849 "autosome" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0048738 "cardiac muscle tissue development" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0003682
GO:GO:0001741 GO:GO:0000805 GO:GO:0000806 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0030849 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 GeneTree:ENSGT00390000007239 OMA:DVYSLFF
EMBL:AADN02061989 EMBL:AADN02061988 EMBL:AADN02061985
EMBL:AADN02061986 EMBL:AADN02061983 EMBL:AADN02061984
EMBL:AADN02061987 EMBL:AADN02061990 EMBL:AADN02061991
IPI:IPI00600088 Ensembl:ENSGALT00000005982 Uniprot:F1NMJ8
Length = 1078
Score = 487 (176.5 bits), Expect = 2.5e-93, Sum P(7) = 2.5e-93
Identities = 115/327 (35%), Positives = 172/327 (52%)
Query: 488 QELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRN 547
+E+D ++C+R SYR LP Y P S R+ + +VLND WVS S SED +F ++
Sbjct: 343 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 402
Query: 548 QYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFSA---- 603
YEE L RCED+RFELD++LE+ +T + E + ++ + F L D
Sbjct: 403 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRLTQEDQEKFRLDDCLGGTSEV 462
Query: 604 LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAK 663
+ R I R+YGD ++++ L+KNP A+PV+L RLK K+EEW + + FNK+W E Y K
Sbjct: 463 IQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 522
Query: 664 NHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVI-PHL 722
+ KSLDH++ FKQ D+K L +KSL+ EI+ + Q + + G PHL
Sbjct: 523 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQH------SEGRSSSTNEPHL 576
Query: 723 EYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFL-EPMLSVPSRPSDVEGA 780
+ Y D I ED L+ Y + + K+ ++ F+ E S P S E +
Sbjct: 577 IFIYEDKQILEDAASLISYYVKRQPTIQKEDQATIRQIMHHFIPELFFSQPPEHSISEES 636
Query: 781 EDAGKARHSGKNNSASSMVESDGSPGP 807
D + H G+N + + PGP
Sbjct: 637 TDEDRENHQGQNLDTPELRKKH-VPGP 662
Score = 184 (69.8 bits), Expect = 2.5e-93, Sum P(7) = 2.5e-93
Identities = 44/108 (40%), Positives = 64/108 (59%)
Query: 150 DEDEAPPKK-TVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDIN------- 201
D+ + P + +VEF AI++VNKIK RF + +Y+SFLEIL+ Y+KE +
Sbjct: 105 DKSQIPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFRGM 164
Query: 202 ---EVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQR 246
EV++EVA+LF DLL EF +FLP+ + + N P NS Q+
Sbjct: 165 SEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEVNSVQK 212
Score = 177 (67.4 bits), Expect = 2.5e-93, Sum P(7) = 2.5e-93
Identities = 36/71 (50%), Positives = 46/71 (64%)
Query: 82 LTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTFL 141
L+YL +VK F Y+ FLE+MK+FK+Q DT GVI RV LF H +LI GFN FL
Sbjct: 1 LSYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFL 60
Query: 142 PKGYEITLDED 152
P GY I + ++
Sbjct: 61 PLGYRIEIPKN 71
Score = 157 (60.3 bits), Expect = 2.5e-93, Sum P(7) = 2.5e-93
Identities = 45/178 (25%), Positives = 87/178 (48%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K N E++ + E + Y F+ + +LLDG+ID ++ED R + +Y+ FT
Sbjct: 743 KTNDPAMELRLKQPSEVELEEYYPAFLDMVRSLLDGNIDPTQYEDTLREMFTIHAYIGFT 802
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESR-KPGKQIDS---------VYYENARV 1273
+DKL+ + +QL + +D++ K+++LY E R G + S Y A
Sbjct: 803 MDKLVQNIVRQLHHLVSDDICLKVVELYLNERKRGAAGGNLSSRCVRAAKETSYQWKAER 862
Query: 1274 LLHEENIYRIQLSSSPSR--LSIQLMDNVIEKPEAFAVTMDPNFAAYLLNDFLSAFLG 1329
+ +EN +++ + ++I+L+D E+ + T DP +L N ++ ++G
Sbjct: 863 CMADENCFKVMFLQRKGQVIMTIELLDT--EETQ----TEDPVEVQHLAN-YMEQYVG 913
Score = 113 (44.8 bits), Expect = 1.2e-71, Sum P(6) = 1.2e-71
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 166 ITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFL 225
+++++++K RF +D Y FLEI+ ++ + D V V+ LF +H DL+ F FL
Sbjct: 1 LSYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFL 60
Query: 226 P 226
P
Sbjct: 61 P 61
Score = 109 (43.4 bits), Expect = 2.5e-93, Sum P(7) = 2.5e-93
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 368 QGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
Q F F DKV+ L S + Y+ FL+C+ +++ ++ ++L LVT LGK+ +L +F F
Sbjct: 262 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKSF 321
Score = 99 (39.9 bits), Expect = 3.6e-70, Sum P(6) = 3.6e-70
Identities = 23/81 (28%), Positives = 43/81 (53%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAG----------VIAR 122
S + ++A++Y+ ++K F D E Y FLE++ ++ ++ +T G V
Sbjct: 113 SDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFRGMSEEEVFTE 172
Query: 123 VKDLFKGHNNLIFGFNTFLPK 143
V +LF+G +L+ F FLP+
Sbjct: 173 VANLFRGQEDLLSEFGQFLPE 193
Score = 66 (28.3 bits), Expect = 2.5e-93, Sum P(7) = 2.5e-93
Identities = 10/40 (25%), Positives = 25/40 (62%)
Query: 1350 ELSAACMAMEGVQLVNGLECRIACNSYKITYVLDTEDVFY 1389
E+ ++ + GV+ ++CR N++K+ +++++ED Y
Sbjct: 953 EVKSSWKRLIGVESACNVDCRFKLNTHKMMFIMNSEDYMY 992
Score = 63 (27.2 bits), Expect = 2.5e-93, Sum P(7) = 2.5e-93
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 1139 VFYGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKE 1179
+F+ N+++Y RLHQTL R+ ++ RT KE
Sbjct: 691 LFFVNNNWYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKE 731
Score = 59 (25.8 bits), Expect = 3.8e-73, Sum P(6) = 3.8e-73
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTR 223
+ +F +K+++ + E VY++FL + ++ +E +E+ V +L +F
Sbjct: 262 QEFSFFDKVRRVLKSQE-VYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFAQFKS 320
Query: 224 FL 225
FL
Sbjct: 321 FL 322
Score = 52 (23.4 bits), Expect = 3.4e-58, Sum P(5) = 3.4e-58
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+ D+VK + SD Y FL+ + + + I + V+ L ++ DL+ FN F
Sbjct: 3 YLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAF 59
Score = 51 (23.0 bits), Expect = 2.5e-72, Sum P(6) = 2.5e-72
Identities = 24/116 (20%), Positives = 52/116 (44%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIYSNGII--KRNDLQNLVTDLLGKYMDLMD 421
+N + +K+K + + Y++FL+ LH Y + K + + + + + ++ +
Sbjct: 118 FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTKGRPFRGMSEEEV--FTEVAN 175
Query: 422 EFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDR 477
F + FL +K+SL G+ V K EH++ +E +K++ R
Sbjct: 176 LFRGQEDLLSEFGQFLPE--AKRSLFT-GNGPCEVNSVQKT-EHEKNLEHSKKRSR 227
Score = 42 (19.8 bits), Expect = 2.7e-64, Sum P(6) = 2.7e-64
Identities = 21/85 (24%), Positives = 34/85 (40%)
Query: 169 VNKIKKRFHNDEHVYKSFLEILNM-YRKEHKDINE--VYSEVASL--FEDHADLLEEFTR 223
+ ++ + FH + F L + YR E + + S + S +H+D EEF
Sbjct: 39 IRRVSQLFHEHPDLIVGFNAFLPLGYRIEIPKNGKLSIQSPLTSQENSHNHSDCSEEFRH 98
Query: 224 FLPDTSATSLSHNIPFVRNSTQRGN 248
LP S IP +S + N
Sbjct: 99 QLPYKEDKS---QIPLESDSVEFNN 120
Score = 41 (19.5 bits), Expect = 6.3e-23, Sum P(5) = 6.3e-23
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 820 GNGDENTSTELNNLCRTALSNGDTITK--ENVLDSDR-VYRDDLSC--SALQLEKEQKNV 874
G +E TE+ NL R D +++ + + ++ R ++ + C +++Q + +KN+
Sbjct: 163 GMSEEEVFTEVANLFR---GQEDLLSEFGQFLPEAKRSLFTGNGPCEVNSVQKTEHEKNL 219
Query: 875 DISDKRS 881
+ S KRS
Sbjct: 220 EHSKKRS 226
Score = 38 (18.4 bits), Expect = 5.6e-37, Sum P(6) = 5.6e-37
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 849 VLDSDRVYRDDLSCSAL 865
VL S VY + L C AL
Sbjct: 273 VLKSQEVYENFLRCIAL 289
Score = 38 (18.4 bits), Expect = 7.9e-28, Sum P(4) = 7.9e-28
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 525 LNDHWVSVTSGSEDYSFKH---MRRNQYEESLFRCEDDRFE 562
LN H + SEDY ++ R Q + + +FE
Sbjct: 976 LNTHKMMFIMNSEDYMYRRGALCRAKQVQPMVLLKHHQQFE 1016
>UNIPROTKB|E1BGW5 [details] [associations]
symbol:LOC520505 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0048738 "cardiac muscle tissue development"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030849 "autosome" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001741 "XY body" evidence=IEA] [GO:0000806 "Y chromosome"
evidence=IEA] [GO:0000805 "X chromosome" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0003682
GO:GO:0048738 GO:GO:0001741 GO:GO:0007519 GO:GO:0000805
GO:GO:0000806 Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0030849
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 OMA:DVYSLFF EMBL:DAAA02019084
IPI:IPI00690642 Ensembl:ENSBTAT00000036414 Uniprot:E1BGW5
Length = 1144
Score = 484 (175.4 bits), Expect = 5.9e-91, Sum P(6) = 5.9e-91
Identities = 118/331 (35%), Positives = 178/331 (53%)
Query: 488 QELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRN 547
+E+D ++C+R SYR LP Y P S R+ + +VLND WVS S SED +F ++
Sbjct: 405 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 464
Query: 548 QYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFSA---- 603
YEE L RCED+RFELD++LE+ +T + E + ++ + F L D
Sbjct: 465 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSEV 524
Query: 604 LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAK 663
+ R I R+YGD ++++ L+KNP A+PV+L RLK K+EEW + + FNK+W E Y K
Sbjct: 525 IQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 584
Query: 664 NHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVI-PHL 722
+ KSLDH++ FKQ D+K L +KSL+ EI+ + Q + + G P PHL
Sbjct: 585 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQH------SEGRSAPSSEPHL 638
Query: 723 EYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSVPSRPSDVEGAE 781
+ Y D I ED L+ Y + + K+ +L F+ P L S+ D+ +E
Sbjct: 639 IFVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLVHQFV-PSLFF-SQQLDLGASE 696
Query: 782 D-AGKARHSGKNNSASSMVE-SDGSPGPDGT 810
D A + R S + +A + +PGP +
Sbjct: 697 DSADEGRASPQGQAADPGGDRKKPAPGPQSS 727
Score = 191 (72.3 bits), Expect = 5.9e-91, Sum P(6) = 5.9e-91
Identities = 39/73 (53%), Positives = 48/73 (65%)
Query: 80 DALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNT 139
DALTYL +VK F Y+ FLE+MK+FK+Q DT GVI RV LF H +LI GFN
Sbjct: 39 DALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNA 98
Query: 140 FLPKGYEITLDED 152
FLP GY I + ++
Sbjct: 99 FLPLGYRIDIPKN 111
Score = 185 (70.2 bits), Expect = 5.9e-91, Sum P(6) = 5.9e-91
Identities = 44/108 (40%), Positives = 63/108 (58%)
Query: 150 DEDEAPPKK-TVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDIN------- 201
D+ + P + +VEF AI++VNKIK RF + +Y+SFLEIL+ Y+KE
Sbjct: 167 DKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGM 226
Query: 202 ---EVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQR 246
EV++EVA+LF DLL EF +FLP+ + + N P NS Q+
Sbjct: 227 SEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSVQK 274
Score = 150 (57.9 bits), Expect = 5.9e-91, Sum P(6) = 5.9e-91
Identities = 39/147 (26%), Positives = 74/147 (50%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K N E++ + E + Y F+ + +LL+GSID ++ED R + +YV FT
Sbjct: 809 KGNDPAMELRLKQPSEVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFT 868
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESR-KPGKQIDS---------VYYENARV 1273
+DKL+ + +QL + +D++ K+++LY E+ R G + S Y A
Sbjct: 869 MDKLVQSIARQLHHLVSDDVCLKVVELYLNEKKRGAAGGNLSSRCVRAARETSYQWKAER 928
Query: 1274 LLHEENIYRIQLSSSPSR--LSIQLMD 1298
+ +EN +++ + ++I+L+D
Sbjct: 929 CMADENCFKVMFLQRKGQVIMTIELLD 955
Score = 133 (51.9 bits), Expect = 5.0e-70, Sum P(5) = 5.0e-70
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 157 KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHAD 216
K V E+A+T+++++K RF +D Y FLEI+ ++ + D V V+ LF +H D
Sbjct: 32 KLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPD 91
Query: 217 LLEEFTRFLP 226
L+ F FLP
Sbjct: 92 LIVGFNAFLP 101
Score = 102 (41.0 bits), Expect = 5.9e-91, Sum P(6) = 5.9e-91
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 368 QGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
Q F F DKV+ L S + Y+ FL+C+ +++ ++ ++L LV LGK+ +L +F F
Sbjct: 324 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVGPFLGKFPELFAQFKSF 383
Score = 98 (39.6 bits), Expect = 2.5e-66, Sum P(5) = 2.5e-66
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAG----------VIAR 122
S + ++A++Y+ ++K F D E Y FLE++ ++ ++ T G V
Sbjct: 175 SDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTE 234
Query: 123 VKDLFKGHNNLIFGFNTFLPK 143
V +LF+G +L+ F FLP+
Sbjct: 235 VANLFRGQEDLLSEFGQFLPE 255
Score = 73 (30.8 bits), Expect = 5.9e-91, Sum P(6) = 5.9e-91
Identities = 25/96 (26%), Positives = 39/96 (40%)
Query: 1085 GKAESEGEA-DGMADQHFVGGDCMSLPMSERFLLSVKPLAKFVPATSVEERKDCRVFYGN 1143
G+A +G+A D D+ S P E+ P + P +F+ N
Sbjct: 702 GRASPQGQAADPGGDRKKPAPGPQSSPPEEKGAAGEAPAPEPQPPQHKPLDDVYSLFFAN 761
Query: 1144 DDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKE 1179
+++Y RLHQTL R+ ++ RT KE
Sbjct: 762 NNWYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKE 797
Score = 61 (26.5 bits), Expect = 9.8e-82, Sum P(6) = 9.8e-82
Identities = 26/143 (18%), Positives = 62/143 (43%)
Query: 1264 DSVYYENARVLLHEENIYRIQLSSSPSR--LSIQLMDNVIEKPEAFAVTMDPNFAAYLLN 1321
++ Y A + +EN +++ + ++I+L+D E+ + + A Y+
Sbjct: 919 ETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELLDT--EEAQTEDPVEVQHLARYV-E 975
Query: 1322 DFLSAFLGKKEP------HAVVLRRNKRRFEGLD---------ELSAACMAMEGVQLVNG 1366
++ A P V L+RN ++F E ++ + GV+
Sbjct: 976 QYVGAEGASSSPTEGFLLKPVFLQRNLKKFRRWQCEQVRALRGEAKSSWRRLVGVESACN 1035
Query: 1367 LECRIACNSYKITYVLDTEDVFY 1389
++CR +++K+ +++++ED Y
Sbjct: 1036 VDCRFKLSTHKMLFIVNSEDYMY 1058
Score = 59 (25.8 bits), Expect = 1.4e-71, Sum P(5) = 1.4e-71
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTR 223
+ +F +K+++ + E VY++FL + ++ +E +E+ V +L +F
Sbjct: 324 QEFSFFDKVRRVLKSQE-VYENFLRCIALFNQELVSGSELLQLVGPFLGKFPELFAQFKS 382
Query: 224 FL 225
FL
Sbjct: 383 FL 384
Score = 54 (24.1 bits), Expect = 1.2e-55, Sum P(4) = 1.2e-55
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFER 429
+ D+VK + SD Y FL+ + + + I + V+ L ++ DL+ FN F
Sbjct: 43 YLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPL 102
Query: 430 CENID 434
ID
Sbjct: 103 GYRID 107
Score = 51 (23.0 bits), Expect = 9.3e-71, Sum P(5) = 9.3e-71
Identities = 25/124 (20%), Positives = 49/124 (39%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIYSNGII--KRNDLQNL--------VTDLL 413
+N + +K+K + + Y++FL+ LH Y + K + + V +L
Sbjct: 180 FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLF 239
Query: 414 GKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTK 473
DL+ EF F + + + C V +S EH++ +E +K
Sbjct: 240 RGQEDLLSEFGQFLPEAKR------SLFTGNGPCEMNSVQKS--------EHEKNLEHSK 285
Query: 474 EKDR 477
++ R
Sbjct: 286 KRSR 289
Score = 42 (19.8 bits), Expect = 2.0e-22, Sum P(4) = 2.0e-22
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 820 GNGDENTSTELNNLCRTALSNGDTITK--ENVLDSDR-VYRDDLSC--SALQLEKEQKNV 874
G +E TE+ NL R D +++ + + ++ R ++ + C +++Q + +KN+
Sbjct: 225 GMSEEEVFTEVANLFR---GQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSVQKSEHEKNL 281
Query: 875 DISDKRS 881
+ S KRS
Sbjct: 282 EHSKKRS 288
Score = 39 (18.8 bits), Expect = 4.6e-07, Sum P(4) = 4.6e-07
Identities = 15/56 (26%), Positives = 22/56 (39%)
Query: 724 YGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPSRPSDVEG 779
+G S S HE L V+ + + K + + FLE M S+ D G
Sbjct: 22 WGRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPG 77
Score = 38 (18.4 bits), Expect = 2.5e-36, Sum P(5) = 2.5e-36
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 849 VLDSDRVYRDDLSCSAL 865
VL S VY + L C AL
Sbjct: 335 VLKSQEVYENFLRCIAL 351
>UNIPROTKB|F1PN34 [details] [associations]
symbol:SIN3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 OMA:DVYSLFF EMBL:AAEX03012305
Ensembl:ENSCAFT00000024754 Uniprot:F1PN34
Length = 1156
Score = 514 (186.0 bits), Expect = 2.1e-89, Sum P(6) = 2.1e-89
Identities = 153/470 (32%), Positives = 229/470 (48%)
Query: 368 QGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
Q F F DKV+ L S + Y+ FL+C+ +++ ++ ++L LV+ LGK+ +L +F F
Sbjct: 306 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 365
Query: 427 FERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKEKYYAKS 486
E F A MS +S DG +SR + R + K + K
Sbjct: 366 LGVKEL--SF-APPMSDRS--GDG-ISREIDYASCKRIGSSYRALPKTYQQPKCSGRTAI 419
Query: 487 IQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRR 546
+E+ L + L P+ S S QVLND WVS S SED +F ++
Sbjct: 420 CKEVVLPGGSLSRQAVTLFPE---FSSTCWISGYIVQVLNDTWVSFPSWSEDSTFVSSKK 476
Query: 547 NQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFSA--- 603
YEE L RCED+RFELD++LE+ +T + E + ++ + F L D
Sbjct: 477 TPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSE 536
Query: 604 -LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYA 662
+ R I R+YGD ++++ L+KNP A+PV+L RLK K+EEW + + FNK+W E Y
Sbjct: 537 VIQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYE 596
Query: 663 KNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVI-PH 721
K + KSLDH++ FKQ D+K L +KSL+ EI+ + Q + + G P PH
Sbjct: 597 KAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQH------SEGRSAPSSEPH 650
Query: 722 LEYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSVPSRPSDVEGA 780
L + Y D I ED L+ Y + + K+ +L F+ P L S+ D+ +
Sbjct: 651 LIFVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLVHQFV-PSLFF-SQQLDLGAS 708
Query: 781 ED-AGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTE 829
ED A ++R S + SA +PGP S P G E +TE
Sbjct: 709 EDSADESRGSPQGQSADPGDRKKPAPGPQ----SSPPEEKGPVGEAPATE 754
Score = 191 (72.3 bits), Expect = 2.1e-89, Sum P(6) = 2.1e-89
Identities = 39/73 (53%), Positives = 48/73 (65%)
Query: 80 DALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNT 139
DALTYL +VK F Y+ FLE+MK+FK+Q DT GVI RV LF H +LI GFN
Sbjct: 43 DALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNA 102
Query: 140 FLPKGYEITLDED 152
FLP GY I + ++
Sbjct: 103 FLPLGYRIDIPKN 115
Score = 185 (70.2 bits), Expect = 2.1e-89, Sum P(6) = 2.1e-89
Identities = 44/108 (40%), Positives = 63/108 (58%)
Query: 150 DEDEAPPKK-TVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDIN------- 201
D+ + P + +VEF AI++VNKIK RF + +Y+SFLEIL+ Y+KE
Sbjct: 149 DKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGM 208
Query: 202 ---EVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQR 246
EV++EVA+LF DLL EF +FLP+ + + N P NS Q+
Sbjct: 209 SEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSVQK 256
Score = 152 (58.6 bits), Expect = 2.1e-89, Sum P(6) = 2.1e-89
Identities = 39/147 (26%), Positives = 74/147 (50%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K N E++ + E + Y F+ + +LL+GSID ++ED R + +YV FT
Sbjct: 821 KANDPAMELRLKQPSEVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFT 880
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESR-KPGKQIDS---------VYYENARV 1273
+DKL+ + +QL + +D++ K+++LY E+ R G + S Y A
Sbjct: 881 MDKLVQSIARQLHHLVSDDVCLKVVELYLNEKKRGAAGGNLSSRCVRAARETSYQWKAER 940
Query: 1274 LLHEENIYRIQLSSSPSR--LSIQLMD 1298
+ +EN +++ + ++I+L+D
Sbjct: 941 CMADENCFKVMFLQRKGQVIMTIELLD 967
Score = 133 (51.9 bits), Expect = 2.3e-68, Sum P(5) = 2.3e-68
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 157 KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHAD 216
K V E+A+T+++++K RF +D Y FLEI+ ++ + D V V+ LF +H D
Sbjct: 36 KLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPD 95
Query: 217 LLEEFTRFLP 226
L+ F FLP
Sbjct: 96 LIVGFNAFLP 105
Score = 98 (39.6 bits), Expect = 9.9e-65, Sum P(5) = 9.9e-65
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAG----------VIAR 122
S + ++A++Y+ ++K F D E Y FLE++ ++ ++ T G V
Sbjct: 157 SDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTE 216
Query: 123 VKDLFKGHNNLIFGFNTFLPK 143
V +LF+G +L+ F FLP+
Sbjct: 217 VANLFRGQEDLLSEFGQFLPE 237
Score = 66 (28.3 bits), Expect = 2.1e-89, Sum P(6) = 2.1e-89
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 1139 VFYGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKE 1179
+F+ N+++Y RLHQTL R+ ++ RT KE
Sbjct: 769 LFFANNNWYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKE 809
Score = 60 (26.2 bits), Expect = 3.1e-25, Sum P(5) = 3.1e-25
Identities = 14/62 (22%), Positives = 32/62 (51%)
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTR 223
+ +F +K+++ + E VY++FL + ++ +E +E+ V+ +L +F
Sbjct: 306 QEFSFFDKVRRVLKSQE-VYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKS 364
Query: 224 FL 225
FL
Sbjct: 365 FL 366
Score = 59 (25.8 bits), Expect = 2.1e-89, Sum P(6) = 2.1e-89
Identities = 9/40 (22%), Positives = 24/40 (60%)
Query: 1350 ELSAACMAMEGVQLVNGLECRIACNSYKITYVLDTEDVFY 1389
E ++ + GV+ ++CR +++K+ +++++ED Y
Sbjct: 1031 EAKSSWKRLVGVESACNVDCRFKLSTHKMMFIVNSEDYMY 1070
Score = 59 (25.8 bits), Expect = 4.2e-10, Sum P(5) = 4.2e-10
Identities = 27/111 (24%), Positives = 45/111 (40%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFER 429
+ D+VK + SD Y FL+ + + + I + V+ L ++ DL+ FN F
Sbjct: 47 YLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPL 106
Query: 430 CENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKE 480
ID + K N + + +D H E K++ YKE
Sbjct: 107 GYRID------IPKNGKLN---IQSPLSSQDSSHNHSDCAENFKQQMLYKE 148
Score = 51 (23.0 bits), Expect = 6.1e-24, Sum P(6) = 6.1e-24
Identities = 25/124 (20%), Positives = 49/124 (39%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIYSNGII--KRNDLQNL--------VTDLL 413
+N + +K+K + + Y++FL+ LH Y + K + + V +L
Sbjct: 162 FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLF 221
Query: 414 GKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTK 473
DL+ EF F + + + C V +S EH++ +E +K
Sbjct: 222 RGQEDLLSEFGQFLPEAKR------SLFTGNGPCEMNSVQKS--------EHEKNLEHSK 267
Query: 474 EKDR 477
++ R
Sbjct: 268 KRSR 271
Score = 44 (20.5 bits), Expect = 2.4e-08, Sum P(5) = 2.4e-08
Identities = 34/139 (24%), Positives = 52/139 (37%)
Query: 724 YGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPSRPSDVEGA-ED 782
+G S S HE L V+ + + K + + FLE M S+ D G
Sbjct: 26 WGRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRR 85
Query: 783 AGKARHSGKN-----NSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTELNNLCRTA 837
+ H + N+ + P +G +N + P+SS + N S N +
Sbjct: 86 VSQLFHEHPDLIVGFNAFLPLGYRIDIP-KNGKLNIQSPLSSQDSSHNHSDCAENFKQQM 144
Query: 838 LSNGDTITKENV-LDSDRV 855
L D K V L+SD V
Sbjct: 145 LYKED---KPQVPLESDSV 160
Score = 42 (19.8 bits), Expect = 2.0e-23, Sum P(5) = 2.0e-23
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 820 GNGDENTSTELNNLCRTALSNGDTITK--ENVLDSDR-VYRDDLSC--SALQLEKEQKNV 874
G +E TE+ NL R D +++ + + ++ R ++ + C +++Q + +KN+
Sbjct: 207 GMSEEEVFTEVANLFR---GQEDLLSEFGQFLPEAKRSLFTGNGPCEMNSVQKSEHEKNL 263
Query: 875 DISDKRS 881
+ S KRS
Sbjct: 264 EHSKKRS 270
Score = 38 (18.4 bits), Expect = 2.1e-37, Sum P(6) = 2.1e-37
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 849 VLDSDRVYRDDLSCSAL 865
VL S VY + L C AL
Sbjct: 317 VLKSQEVYENFLRCIAL 333
>ZFIN|ZDB-GENE-030131-8264 [details] [associations]
symbol:sin3b "SIN3 homolog B, transcription
regulator (yeast)" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 ZFIN:ZDB-GENE-030131-8264 GO:GO:0005634
GO:GO:0006355 EMBL:BX004884 Gene3D:1.20.1160.11 SUPFAM:SSF47762
eggNOG:COG5602 InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
HOVERGEN:HBG060425 GeneTree:ENSGT00390000007239 CTD:23309
HOGENOM:HOG000230688 OMA:DVYSLFF OrthoDB:EOG4ZGPBH EMBL:BC171496
EMBL:BC171498 IPI:IPI00501556 RefSeq:NP_001038410.1
UniGene:Dr.74013 SMR:Q1LYM8 STRING:Q1LYM8
Ensembl:ENSDART00000090371 GeneID:560837 KEGG:dre:560837
InParanoid:Q1LYM8 NextBio:20883638 Uniprot:Q1LYM8
Length = 1196
Score = 474 (171.9 bits), Expect = 2.5e-89, Sum P(6) = 2.5e-89
Identities = 121/389 (31%), Positives = 194/389 (49%)
Query: 480 EKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDY 539
++Y +E+D ++C+R SYR LP Y P S R+ + +VLND WVS S SED
Sbjct: 423 DRYMEGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDS 482
Query: 540 SFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKD 599
+F ++ YEE L RCED+RFELD++LE+ +T + E + ++ + + F L D
Sbjct: 483 TFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRLSLEDQERFRLDD 542
Query: 600 HFSA----LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNK 655
+ R + R+YGD ++++ L+++PA A+PV+L RLK K+EEW + + FNK
Sbjct: 543 CLGGTSEVIQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLKRLKAKEEEWREAQQGFNK 602
Query: 656 VWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHR 715
+W E Y K + KSLDH+ FKQ D K L +KSL+ EI+ + +Q + + R
Sbjct: 603 IWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESIYDERQEQSTEEGSVGQQGR 662
Query: 716 QPVI------PHLEYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPML 768
PH+ + Y D I ED L+ Y + + KD + ++ F +
Sbjct: 663 DGTSTASTSEPHMIFNYEDKQILEDAASLIIYHVKRQPTIHKDDKDHIKRIIQHFAPDLF 722
Query: 769 SVPSRPSDVEGAEDAGKARHSGKNNSASSM-VESDGSPGPDGTVNSRQPISSGNGDENTS 827
+R ++ E+ G++ +A+ V S G +G R+ S + D +T
Sbjct: 723 F--ARRGELSETEEFTDEEGEGEDGAAAGGGVSSTGQQQLNGESRRRRCTSPQSMDTSTV 780
Query: 828 TELNNLCRTALSNGDTITKENVLDSDRVY 856
N A+ D E+ + D VY
Sbjct: 781 AHSINPEGEAVDLRDP-EAEHQKEMDGVY 808
Score = 205 (77.2 bits), Expect = 2.5e-89, Sum P(6) = 2.5e-89
Identities = 40/79 (50%), Positives = 53/79 (67%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
QKL DAL+YL +VK F + Y+ FL++MK+FK+Q DT GVI RV LF GH +L
Sbjct: 34 QKLKVEDALSYLDQVKIRFGNDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDL 93
Query: 134 IFGFNTFLPKGYEITLDED 152
+ GFN FLP GY I + ++
Sbjct: 94 VLGFNAFLPPGYRIEIPKN 112
Score = 170 (64.9 bits), Expect = 2.5e-89, Sum P(6) = 2.5e-89
Identities = 41/110 (37%), Positives = 66/110 (60%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDI-------------NEVYSE 206
VEF+ AI++VNKIK RF ++ Y++FLEIL+ Y+KE ++ +EV+S+
Sbjct: 204 VEFDSAISYVNKIKNRFLDNPETYRAFLEILHTYQKEQLEVKESRGRSTGGMTEDEVFSK 263
Query: 207 VASLFEDHADLLEEFTRFLPDTSATSLSH-NIPFVRNSTQRGNERSAGIP 255
VASLF+ DLL EF +FLPD + + ++P + + N+++ P
Sbjct: 264 VASLFKGQEDLLAEFGQFLPDAKRSLFTGGSLPLKKVEEEELNKQTKKRP 313
Score = 161 (61.7 bits), Expect = 2.5e-89, Sum P(6) = 2.5e-89
Identities = 50/198 (25%), Positives = 93/198 (46%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K N E++ + E + Y F+ + +LLDG++++ ++ED R + +Y+ FT
Sbjct: 863 KANDLAMELRLKQPSEVELEEYYPAFLDMVRSLLDGNLESTQYEDTLREMFTIHAYIGFT 922
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESR-KPGKQIDSV---------YYENARV 1273
+DKL+ + +QLQ + +DE+ ++ +LY E R G + S Y A
Sbjct: 923 IDKLIQNIVRQLQHLVSDEVCLQVTELYLAERKRGAAGGNLSSQCVRAAWEASYQWKAER 982
Query: 1274 LLHEENIYRIQLSSSPSR--LSIQLMDNV-IEKPEAFAVTMDPNFAA-YLLNDFLSAFLG 1329
++ EEN +++ + + L+I+L+D + + V N+ Y+ + L +
Sbjct: 983 VMAEENCFKVMFIQNKGQVTLTIELLDTEEAQGDDPLDVQSLSNYMEQYIGTETLCSQAE 1042
Query: 1330 KKEPHAVVLRRNKRRFEG 1347
V L RN R F G
Sbjct: 1043 GYYFKPVFLPRNVRHFRG 1060
Score = 135 (52.6 bits), Expect = 1.0e-68, Sum P(5) = 1.0e-68
Identities = 36/131 (27%), Positives = 67/131 (51%)
Query: 128 KGHNNLIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFL 187
+ H++ N K Y + + +K ++ E+A+++++++K RF ND +Y FL
Sbjct: 5 QAHSSTAKQINQIQDKAYVVQKQVQQQHFQK-LKVEDALSYLDQVKIRFGNDPGIYNKFL 63
Query: 188 EILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHN-IPFVRN--ST 244
+I+ ++ + D V + V+ LF H DL+ F FLP + N + F+++ S+
Sbjct: 64 DIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGMAFLQSPFSS 123
Query: 245 Q--RGNERSAG 253
Q G RS G
Sbjct: 124 QVSPGAGRSTG 134
Score = 105 (42.0 bits), Expect = 2.5e-89, Sum P(6) = 2.5e-89
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 370 FIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
F F DKV+ L S + Y+ FL+C+ +++ ++ +L LVT LGK+ +L +F F
Sbjct: 351 FTFFDKVRRLLKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSF 408
Score = 104 (41.7 bits), Expect = 1.7e-65, Sum P(5) = 1.7e-65
Identities = 35/109 (32%), Positives = 53/109 (48%)
Query: 81 ALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTD--------TAG-----VIARVKDLF 127
A++Y+ ++K+ F D E Y FLE++ ++ ++ + T G V ++V LF
Sbjct: 209 AISYVNKIKNRFLDNPETYRAFLEILHTYQKEQLEVKESRGRSTGGMTEDEVFSKVASLF 268
Query: 128 KGHNNLIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNK-IKKR 175
KG +L+ F FLP P KK VE EE +NK KKR
Sbjct: 269 KGQEDLLAEFGQFLPDAKRSLFTGGSLPLKK-VEEEE----LNKQTKKR 312
Score = 94 (38.1 bits), Expect = 2.2e-82, Sum P(6) = 2.2e-82
Identities = 36/163 (22%), Positives = 70/163 (42%)
Query: 1264 DSVYYENARVLLHEENIYRIQLSSSPSR--LSIQLMDNV-IEKPEAFAVTMDPNFAA-YL 1319
++ Y A ++ EEN +++ + + L+I+L+D + + V N+ Y+
Sbjct: 973 EASYQWKAERVMAEENCFKVMFIQNKGQVTLTIELLDTEEAQGDDPLDVQSLSNYMEQYI 1032
Query: 1320 LNDFLSAFLGKKEPHAVVLRRNKRRFEG--LDELSAACMAME-----GVQLVNGLECRIA 1372
+ L + V L RN R F G + ++ A E GV+ L+CR
Sbjct: 1033 GTETLCSQAEGYYFKPVFLPRNVRHFRGWQIKQVEAMRCRREWHRKMGVETAGNLDCRFK 1092
Query: 1373 CNSYKITYVLDTEDVFYXXXXXXXXXXXSSHYNQARVLRFHRF 1415
N++K+ +V+++ED Y +A+ RF ++
Sbjct: 1093 LNTHKMVFVMNSEDYMYRRGALVKARRSQHRVARAQHERFEQW 1135
Score = 69 (29.3 bits), Expect = 2.6e-72, Sum P(5) = 2.6e-72
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 167 TFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLP 226
TF +K+++ + E VY++FL + ++ +E E+ V +L +F FL
Sbjct: 352 TFFDKVRRLLKSQE-VYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSFLG 410
Query: 227 DTSATSLSHNIPFVRNSTQRGNER 250
D LSH I + + G R
Sbjct: 411 DKE---LSHVISGLSDRYMEGGGR 431
Score = 62 (26.9 bits), Expect = 1.1e-30, Sum P(5) = 1.1e-30
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 525 LNDHWVSVTSGSEDYSFKH---MRRNQYEESLFRCEDDRFEL---DMLLESVSSTAKRAE 578
LN H + SEDY ++ ++ + + + R + +RFE L E VS A+R+
Sbjct: 1093 LNTHKMVFVMNSEDYMYRRGALVKARRSQHRVARAQHERFEQWHRGWLSEHVSPAAERSV 1152
Query: 579 E--LLNSINENKITLET 593
+ L+ +E+ I +T
Sbjct: 1153 QDWLMGEEDEDMIPCKT 1169
Score = 58 (25.5 bits), Expect = 2.5e-89, Sum P(6) = 2.5e-89
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 1139 VFYGNDDFYVLFRLHQTLYERI 1160
+F+ N+++Y RLHQTL R+
Sbjct: 810 LFFVNNNWYFFLRLHQTLCSRL 831
Score = 56 (24.8 bits), Expect = 7.7e-25, Sum P(4) = 7.7e-25
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 774 PSDVEGAEDAGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTELN 831
P + + AG++ S +++SS V P + V S + I+S +G S++L+
Sbjct: 120 PFSSQVSPGAGRSTGSSVVSASSSAVVEAAGPAQNEAVTSPESIASSSGPPEQSSKLS 177
Score = 51 (23.0 bits), Expect = 1.9e-70, Sum P(5) = 1.9e-70
Identities = 25/128 (19%), Positives = 51/128 (39%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIY-------------SNGIIKRNDLQNLVT 410
++ + +K+K + + Y+AFL+ LH Y S G + +++ + V
Sbjct: 206 FDSAISYVNKIKNRFLDNPETYRAFLEILHTYQKEQLEVKESRGRSTGGMTEDEVFSKVA 265
Query: 411 DLLGKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREME 470
L DL+ EF F + F G + K + + +++ K +
Sbjct: 266 SLFKGQEDLLAEFGQFLPDAKR-SLFTGGSLPLKKV-EEEELNKQTKKRPRPMLLPHMTP 323
Query: 471 VTKEKDRY 478
+ K+K +Y
Sbjct: 324 LLKKKMKY 331
Score = 48 (22.0 bits), Expect = 2.5e-53, Sum P(4) = 2.5e-53
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+ D+VK + +D Y FL + + + I + N V+ L + DL+ FN F
Sbjct: 44 YLDQVKIRFGNDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAF 100
Score = 46 (21.3 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 18/94 (19%), Positives = 44/94 (46%)
Query: 1275 LHEENIYRIQLSSSPSRLSIQLMDNVIEKPEAFAVTMDPNFAAYLLNDFLSAFLGKKEPH 1334
+ EE + + Q P + + M +++K ++ + DP+FA+ + L F +
Sbjct: 300 VEEEELNK-QTKKRPRPMLLPHMTPLLKKKMKYSCSKDPSFASVGKHGVLREFTFFDKVR 358
Query: 1335 AVVLRRNKRRFEGLDELSAACMAMEGVQLVNGLE 1368
++ +++ +E C+A+ ++V+G E
Sbjct: 359 RLL--KSQEVYENF----LRCIALFNQEVVSGAE 386
Score = 40 (19.1 bits), Expect = 2.9e-42, Sum P(6) = 2.9e-42
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 455 SVKIEDKDREHKREME 470
+V + D + EH++EM+
Sbjct: 790 AVDLRDPEAEHQKEMD 805
Score = 40 (19.1 bits), Expect = 3.3e-23, Sum P(4) = 3.3e-23
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 895 NSDASPAIGAENSHGRTGSEMMSASLRPCDAAKDDLKHEANVNP 938
+S SP GA S TGS ++SAS A ++EA +P
Sbjct: 122 SSQVSP--GAGRS---TGSSVVSASSSAVVEAAGPAQNEAVTSP 160
Score = 40 (19.1 bits), Expect = 4.4e-22, Sum P(3) = 4.4e-22
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 142 PKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDIN 201
P+G + L + EA +K ++ + FVN F S +L +YR+ + +
Sbjct: 786 PEGEAVDLRDPEAEHQKEMDGVYNLFFVNNNWYFFLRLHQTLCS--RLLKIYRQAERQLL 843
Query: 202 EVYSE 206
E +E
Sbjct: 844 EHRAE 848
Score = 39 (18.8 bits), Expect = 6.6e-23, Sum P(3) = 6.6e-23
Identities = 23/92 (25%), Positives = 35/92 (38%)
Query: 1258 KPGKQIDSVYYENARVLLHEENIYRIQLSSSPSRLSIQLMDNVIEKPEAFAVTMDPNFAA 1317
K G + +++ R LL + +Y L R V+ E + + P
Sbjct: 344 KHGVLREFTFFDKVRRLLKSQEVYENFL-----RCIALFNQEVVSGAELLQL-VTPFLGK 397
Query: 1318 Y--LLNDFLSAFLGKKEPHAVVLRRNKRRFEG 1347
+ L F S FLG KE V+ + R EG
Sbjct: 398 FPELYTQFKS-FLGDKELSHVISGLSDRYMEG 428
>MGI|MGI:107158 [details] [associations]
symbol:Sin3b "transcriptional regulator, SIN3B (yeast)"
species:10090 "Mus musculus" [GO:0000805 "X chromosome"
evidence=IDA] [GO:0000806 "Y chromosome" evidence=IDA] [GO:0001741
"XY body" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003714 "transcription corepressor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IDA] [GO:0030849 "autosome" evidence=IDA]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048738 "cardiac muscle tissue development"
evidence=IDA] InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
MGI:MGI:107158 GO:GO:0005634 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0006351 GO:GO:0003682 GO:GO:0048738
GO:GO:0045786 GO:GO:0001741 GO:GO:0007519 GO:GO:0000805
GO:GO:0000806 Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0030849
PDB:1E91 PDB:1PD7 PDBsum:1E91 PDBsum:1PD7 eggNOG:COG5602
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 PDB:2CZY PDBsum:2CZY
HOVERGEN:HBG060425 GeneTree:ENSGT00390000007239 CTD:23309
HOGENOM:HOG000230688 OMA:DVYSLFF OrthoDB:EOG4ZGPBH EMBL:L38622
EMBL:AF038848 EMBL:AK173005 EMBL:BC020049 EMBL:BC021160
IPI:IPI00121971 IPI:IPI00124066 IPI:IPI00338793 IPI:IPI00608092
PIR:I61714 RefSeq:NP_001106719.1 RefSeq:NP_033214.2 UniGene:Mm.2137
PDB:2CR7 PDB:2F05 PDBsum:2CR7 PDBsum:2F05 ProteinModelPortal:Q62141
SMR:Q62141 DIP:DIP-470N IntAct:Q62141 STRING:Q62141
PhosphoSite:Q62141 PaxDb:Q62141 PRIDE:Q62141
Ensembl:ENSMUST00000004494 Ensembl:ENSMUST00000109950 GeneID:20467
KEGG:mmu:20467 UCSC:uc009mgp.2 UCSC:uc009mgq.3 InParanoid:Q62141
EvolutionaryTrace:Q62141 NextBio:298571 Bgee:Q62141
CleanEx:MM_SIN3B Genevestigator:Q62141
GermOnline:ENSMUSG00000031622 Uniprot:Q62141
Length = 1098
Score = 480 (174.0 bits), Expect = 3.5e-89, Sum P(6) = 3.5e-89
Identities = 128/388 (32%), Positives = 195/388 (50%)
Query: 488 QELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRN 547
+E+D ++C+R SYR LP Y P S R+ + +VLND WVS S SED +F ++
Sbjct: 378 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 437
Query: 548 QYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSIN----ENKITLETPFHLKDHFSA 603
YEE L RCED+RFELD++LE+ +T + E + ++ E++ L L
Sbjct: 438 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSEV 497
Query: 604 LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAK 663
+ R I R+YGD +V++ L++NPA A+PV+L RLK K+EEW + + FNK+W E Y K
Sbjct: 498 IQRRAIHRIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 557
Query: 664 NHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVI-PHL 722
+ KSLDH++ FKQ D+K L +KSL+ EI+ + Q + + G P PHL
Sbjct: 558 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQH------SEGRSAPSSEPHL 611
Query: 723 EYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSVPSRP--SDVEG 779
+ Y D I ED L+ Y + + K+ +L FL + P SD +
Sbjct: 612 IFVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIRQLLHRFLPSLFFSQQCPGTSD-DS 670
Query: 780 AEDAGKARHSG---KNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTELNN-LCR 835
A++ + R S + +D SP P ++ + N + L+ LC
Sbjct: 671 ADERDRDRDSAEPERRRPTDEKPPADASPEPPKVLDDVYSLFFANNNWYFFLRLHQTLCA 730
Query: 836 TALSNGDTITKENVLDSDRVY-RDDLSC 862
L K+ +L+ R R+ L C
Sbjct: 731 RLLKIYRQAQKQ-LLEHRREQEREQLLC 757
Score = 191 (72.3 bits), Expect = 3.5e-89, Sum P(6) = 3.5e-89
Identities = 39/73 (53%), Positives = 48/73 (65%)
Query: 80 DALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNT 139
DALTYL +VK F Y+ FLE+MK+FK+Q DT GVI RV LF H +LI GFN
Sbjct: 36 DALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNA 95
Query: 140 FLPKGYEITLDED 152
FLP GY I + ++
Sbjct: 96 FLPLGYRIDIPKN 108
Score = 185 (70.2 bits), Expect = 3.5e-89, Sum P(6) = 3.5e-89
Identities = 46/113 (40%), Positives = 65/113 (57%)
Query: 150 DEDEAPPKK-TVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKE--HK-------- 198
D + P + +VEF AI++VNKIK RF + +Y+SFLEIL+ Y+KE H
Sbjct: 141 DRGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGM 200
Query: 199 DINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQRGNERS 251
EV++EVA+LF DLL EF +FLP+ + + N NS Q+ E+S
Sbjct: 201 SEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGSCEMNSGQKNEEKS 253
Score = 146 (56.5 bits), Expect = 3.5e-89, Sum P(6) = 3.5e-89
Identities = 43/173 (24%), Positives = 86/173 (49%)
Query: 1171 EMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYR 1230
E++ + E + Y F+ + +LL+GSID ++ED R + +Y+ FT+DKL+
Sbjct: 770 ELRLKQPSEVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYIGFTMDKLVQN 829
Query: 1231 LCKQLQTVAADEMDNKLIQLYEYEESR-KPGKQIDS---------VYYENARVLLHEENI 1280
+ +QL + +D++ K+++LY E+ R G + S Y A + +EN
Sbjct: 830 IARQLHHLVSDDVCLKVVELYLNEQQRGAAGGNLSSRCVRAARETSYQWKAERCMADENC 889
Query: 1281 YRIQLSSSPSR--LSIQLMDNVIEKPEAFAVTMDPNFAAYLLNDFLSAFLGKK 1331
+++ + ++I+L+D E+ A T DP +L ++ ++G +
Sbjct: 890 FKVMFLQRRGQVIMTIELLDT--EE----AQTEDPVEVQHLAR-YVEQYVGSE 935
Score = 133 (51.9 bits), Expect = 3.7e-68, Sum P(5) = 3.7e-68
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 157 KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHAD 216
K V E+A+T+++++K RF +D Y FLEI+ ++ + D V V+ LF +H D
Sbjct: 29 KLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPD 88
Query: 217 LLEEFTRFLP 226
L+ F FLP
Sbjct: 89 LIVGFNAFLP 98
Score = 106 (42.4 bits), Expect = 3.5e-89, Sum P(6) = 3.5e-89
Identities = 31/90 (34%), Positives = 50/90 (55%)
Query: 368 QGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
Q F F DKV+ L S + Y+ FL+C+ +++ ++ ++L LV+ LGK+ +L +F F
Sbjct: 297 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 356
Query: 427 FERCENIDGFLAGVMSKKSLCNDGHVSRSV 456
E F A MS +S DG +SR +
Sbjct: 357 LGVKEL--SF-APPMSDRS--GDG-ISREI 380
Score = 97 (39.2 bits), Expect = 2.0e-64, Sum P(5) = 2.0e-64
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAG----------VIAR 122
S + ++A++Y+ ++K F D E Y FLE++ ++ ++ T G V
Sbjct: 149 SDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTE 208
Query: 123 VKDLFKGHNNLIFGFNTFLPK 143
V +LF+G +L+ F FLP+
Sbjct: 209 VANLFRGQEDLLSEFGQFLPE 229
Score = 60 (26.2 bits), Expect = 1.9e-69, Sum P(5) = 1.9e-69
Identities = 14/62 (22%), Positives = 32/62 (51%)
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTR 223
+ +F +K+++ + E VY++FL + ++ +E +E+ V+ +L +F
Sbjct: 297 QEFSFFDKVRRVLKSQE-VYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKS 355
Query: 224 FL 225
FL
Sbjct: 356 FL 357
Score = 60 (26.2 bits), Expect = 3.7e-43, Sum P(6) = 3.7e-43
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 1139 VFYGNDDFYVLFRLHQTLYERI 1160
+F+ N+++Y RLHQTL R+
Sbjct: 711 LFFANNNWYFFLRLHQTLCARL 732
Score = 58 (25.5 bits), Expect = 3.5e-89, Sum P(6) = 3.5e-89
Identities = 9/40 (22%), Positives = 23/40 (57%)
Query: 1350 ELSAACMAMEGVQLVNGLECRIACNSYKITYVLDTEDVFY 1389
E ++ + GV+ ++CR ++K+ +++++ED Y
Sbjct: 973 EAKSSWKRLMGVESACDVDCRFRLGTHKMVFIVNSEDYMY 1012
Score = 55 (24.4 bits), Expect = 1.7e-53, Sum P(4) = 1.7e-53
Identities = 28/112 (25%), Positives = 47/112 (41%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFER 429
+ D+VK + SD Y FL+ + + + I + V+ L ++ DL+ FN F
Sbjct: 40 YLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPL 99
Query: 430 CENID----GFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREM-EVTKEKD 476
ID G L + S S ++ H + K +K + +V E D
Sbjct: 100 GYRIDIPKNGKL-NIQSPLSSQDNSHSHGDCGEDFKQMSYKEDRGQVPLESD 150
Score = 49 (22.3 bits), Expect = 2.9e-68, Sum P(5) = 2.9e-68
Identities = 23/115 (20%), Positives = 45/115 (39%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIYSNGII--KRNDLQNL--------VTDLL 413
+N + +K+K + + Y++FL+ LH Y + K + + V +L
Sbjct: 154 FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLF 213
Query: 414 GKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKRE 468
DL+ EF F + + + C ++ K E+K EH ++
Sbjct: 214 RGQEDLLSEFGQFLPEAKR------SLFTGNGSCE---MNSGQKNEEKSLEHNKK 259
Score = 39 (18.8 bits), Expect = 1.0e-06, Sum P(5) = 1.0e-06
Identities = 15/56 (26%), Positives = 22/56 (39%)
Query: 724 YGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPSRPSDVEG 779
+G S S HE L V+ + + K + + FLE M S+ D G
Sbjct: 19 WGRSGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPG 74
Score = 38 (18.4 bits), Expect = 3.0e-36, Sum P(6) = 3.0e-36
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 849 VLDSDRVYRDDLSCSAL 865
VL S VY + L C AL
Sbjct: 308 VLKSQEVYENFLRCIAL 324
Score = 38 (18.4 bits), Expect = 7.4e-22, Sum P(5) = 7.4e-22
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 998 FGVYGDAAVKTLPKAKHGVESRQYQSKNEKGLQH 1031
FG + A ++L E Q EK L+H
Sbjct: 223 FGQFLPEAKRSLFTGNGSCEMNSGQKNEEKSLEH 256
>FB|FBgn0022764 [details] [associations]
symbol:Sin3A "Sin3A" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS;IDA;NAS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEP;IMP;TAS] [GO:0007422 "peripheral
nervous system development" evidence=TAS] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0003712 "transcription cofactor activity"
evidence=NAS] [GO:0016580 "Sin3 complex" evidence=NAS] [GO:0000791
"euchromatin" evidence=TAS] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0048666 "neuron development" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0017053 "transcriptional
repressor complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0035206 "regulation of hemocyte proliferation"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
EMBL:AE013599 GO:GO:0007346 GO:GO:0017053 GO:GO:0045892
GO:GO:0007422 GO:GO:0048813 GO:GO:0007517 GO:GO:0005700
GO:GO:0035206 GO:GO:0016580 GO:GO:0000791 Gene3D:1.20.1160.11
SUPFAM:SSF47762 KO:K11644 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 CTD:25942 ChiTaRS:SIN3A GeneTree:ENSGT00390000007239
UniGene:Dm.4374 GeneID:36382 KEGG:dme:Dmel_CG8815
FlyBase:FBgn0022764 GenomeRNAi:36382 NextBio:798235 EMBL:BT016112
RefSeq:NP_001188912.1 RefSeq:NP_725187.1 RefSeq:NP_725188.1
SMR:Q5U0Y0 IntAct:Q5U0Y0 STRING:Q5U0Y0 EnsemblMetazoa:FBtr0087887
EnsemblMetazoa:FBtr0087890 EnsemblMetazoa:FBtr0303565
UCSC:CG8815-RB InParanoid:Q5U0Y0 Uniprot:Q5U0Y0
Length = 2062
Score = 521 (188.5 bits), Expect = 4.6e-89, Sum P(6) = 4.6e-89
Identities = 137/422 (32%), Positives = 213/422 (50%)
Query: 372 FCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFF--E 428
F DKV++ L S + Y FL+CL +++ I+ + +L LV+ L K+ DL+ F F
Sbjct: 924 FFDKVRKALRSPEVYDNFLRCLTLFNQEIVSKTELLGLVSPFLMKFPDLLRWFTDFLGPP 983
Query: 429 RCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKEKYYAKSIQ 488
+ G + G+ + G S S D+ H+ E Y +Q
Sbjct: 984 SGQPAGGLIDGMPLAATQRQGGGSSNSS--HDRGTSHQSAAE-----------Y----VQ 1026
Query: 489 ELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSV-TSGSEDYSFKHMRRN 547
++DLS+C+R SY LP S R+ L +VLND WVS T SED +F R+
Sbjct: 1027 DVDLSSCKRLGASYCALPQSTVPKKCSGRTALCREVLNDKWVSFPTWASEDSTFVTSRKT 1086
Query: 548 QYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFSA---- 603
Q+EE+++R ED+RFELD+++E S+T + E L ++ + FHL DH
Sbjct: 1087 QFEETIYRTEDERFELDLVIEVNSATIRVLENLQKKMSRMSTEELSKFHLDDHLGGTSQT 1146
Query: 604 LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAK 663
++ R I R+YGD +++ ++KNP +A+P++L RLK K+EEW + + FNK W E K
Sbjct: 1147 IHQRAIHRIYGDKSGEIITGMKKNPFVAVPIVLKRLKVKEEEWREAQKTFNKQWREQNEK 1206
Query: 664 NHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQ-FKENKQTEDDVLFVIAAGHRQPVIPHL 722
+ KSLDH++ FK D K L +KSL EI+ + E EDD + +P PHL
Sbjct: 1207 YYLKSLDHQAINFKPNDMKALRSKSLFNEIETLYDERHDQEDDAM--------EPFGPHL 1258
Query: 723 EYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSVPSRPSDVEGAE 781
Y D I +D L+ + + K + K ++ F+ + P +P + +
Sbjct: 1259 VLPYKDKTILDDAANLLIHHVKRQTGIQKQEKQKIKQIIRQFVPDLFFAPRQPLSDDERD 1318
Query: 782 DA 783
DA
Sbjct: 1319 DA 1320
Score = 217 (81.4 bits), Expect = 4.6e-89, Sum P(6) = 4.6e-89
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 75 KLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLI 134
+L DAL+YL +VK + DQ + Y+ FL++MK+FK+ DT GVI RV LFKGH LI
Sbjct: 269 RLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKGHTELI 328
Query: 135 FGFNTFLPKGYEITLDED 152
+GFN FLP GY+I + D
Sbjct: 329 YGFNMFLPPGYKIEIHSD 346
Score = 183 (69.5 bits), Expect = 4.6e-89, Sum P(6) = 4.6e-89
Identities = 51/189 (26%), Positives = 91/189 (48%)
Query: 1144 DDFYVLF---RLHQTLYERIQWAKMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGS 1200
D +V++ RL ER + + +T ++ + E D Y F+ L N+LDG+
Sbjct: 1516 DRLHVMYERARLLAIEEERCRVNRRESTATALRLKPKPEIQVEDYYPTFLDMLKNVLDGN 1575
Query: 1201 IDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESRK-P 1259
+D+ FED R + G +Y+ FTLDK++ +QLQ + ++L+ E+ R
Sbjct: 1576 MDSNTFEDTMREMFGIYAYISFTLDKVVSNAVRQLQYCVTERAALDCVELFATEQRRGCT 1635
Query: 1260 G-------KQIDSV--YYENARVLLHEENIYRIQLSSSPSRLSIQLMDNVIEKPEAFAVT 1310
G K D Y A +L+EEN +++ + R++I+L+D+ E+ + A
Sbjct: 1636 GGFCRDAHKTFDREMSYQRKAESILNEENCFKVYIYKIDCRVTIELLDSEPEEVDKPAAL 1695
Query: 1311 MDPNFAAYL 1319
F+ Y+
Sbjct: 1696 KAQKFSKYV 1704
Score = 169 (64.5 bits), Expect = 4.6e-89, Sum P(6) = 4.6e-89
Identities = 41/83 (49%), Positives = 50/83 (60%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHK-----DIN--------EVYSE 206
VEF AIT+VNKIK RF N YK FLEIL+ Y++E K +N EVY++
Sbjct: 567 VEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVYTQ 626
Query: 207 VASLFEDHADLLEEFTRFLPDTS 229
VA LF DLL EF +FLPD +
Sbjct: 627 VAKLFGQDEDLLREFGQFLPDAT 649
Score = 115 (45.5 bits), Expect = 1.4e-65, Sum P(5) = 1.4e-65
Identities = 27/105 (25%), Positives = 56/105 (53%)
Query: 154 APPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFED 213
A P+ VE +A+++++++K ++ + +Y +FL+I+ ++ D V V++LF+
Sbjct: 266 ATPRLKVE--DALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCIDTPGVIERVSTLFKG 323
Query: 214 HADLLEEFTRFLP-----DTSATSLSHNIPFVRNSTQRGNERSAG 253
H +L+ F FLP + + +L ++P V + G S G
Sbjct: 324 HTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPTSTG 368
Score = 90 (36.7 bits), Expect = 3.5e-30, Sum P(5) = 3.5e-30
Identities = 33/114 (28%), Positives = 49/114 (42%)
Query: 142 PKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDIN 201
PK Y + EA K T+ +A F +K++K + E VY +FL L ++ +E
Sbjct: 901 PKPYCRDVSFSEASSKCTIS--DA-AFFDKVRKALRSPE-VYDNFLRCLTLFNQEIVSKT 956
Query: 202 EVYSEVASLFEDHADLLEEFTRFLPDTS---ATSLSHNIPFVRNSTQRGNERSA 252
E+ V+ DLL FT FL S A L +P Q G ++
Sbjct: 957 ELLGLVSPFLMKFPDLLRWFTDFLGPPSGQPAGGLIDGMPLAATQRQGGGSSNS 1010
Score = 87 (35.7 bits), Expect = 1.1e-62, Sum P(5) = 1.1e-62
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDF-KAQRTDTAG------------V 119
+Q + + A+TY+ ++K+ FQ+Q KY FLE++ D+ + Q+ G V
Sbjct: 564 NQPVEFNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEV 623
Query: 120 IARVKDLFKGHNNLIFGFNTFLP 142
+V LF +L+ F FLP
Sbjct: 624 YTQVAKLFGQDEDLLREFGQFLP 646
Score = 60 (26.2 bits), Expect = 1.2e-26, Sum P(6) = 1.2e-26
Identities = 25/104 (24%), Positives = 43/104 (41%)
Query: 366 YNQGFIFCDKVKEKLCSDD--YQAFLKCLHIYSNG--IIKRNDLQN--LVTD-------- 411
+N + +K+K + + Y+ FL+ LH Y ++K L ++T+
Sbjct: 569 FNHAITYVNKIKNRFQNQPAKYKKFLEILHDYQREQKVMKEGSLNQGKMLTEQEVYTQVA 628
Query: 412 -LLGKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSR 454
L G+ DL+ EF F N MSK + ++ H R
Sbjct: 629 KLFGQDEDLLREFGQFLPDATNHQS--GQYMSKSASVHNDHGKR 670
Score = 59 (25.8 bits), Expect = 4.6e-89, Sum P(6) = 4.6e-89
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 1124 KFVPATSVEERKD--CRVFYGNDDFYVLFRLHQTLYERI 1160
K +P + +R+D +F+ N+++Y+ RLH L +R+
Sbjct: 1480 KLLPPHAHGQREDESYTLFFANNNWYLFLRLHAILCDRL 1518
Score = 53 (23.7 bits), Expect = 3.3e-09, Sum P(4) = 3.3e-09
Identities = 20/74 (27%), Positives = 30/74 (40%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNN 132
S K T SDA + +V+ + E YD FL + F + ++ V +
Sbjct: 914 SSKCTISDA-AFFDKVRKALRSP-EVYDNFLRCLTLFNQEIVSKTELLGLVSPFLMKFPD 971
Query: 133 LIFGFNTFL--PKG 144
L+ F FL P G
Sbjct: 972 LLRWFTDFLGPPSG 985
Score = 51 (23.0 bits), Expect = 6.2e-74, Sum P(5) = 6.2e-74
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 787 RHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGN--------GDENTSTELNNLCRTAL 838
R+ ++ S + S +P PDG+V + SG+ G S+ +++C +++
Sbjct: 1962 RYRVVQSAVSGGLMSATAPTPDGSVPAVNSAPSGSVSTVNNVQGSAAVSSTSHSMCNSSI 2021
Query: 839 SNGDTITKEN 848
+ D+ T N
Sbjct: 2022 LSADSTTNTN 2031
Score = 48 (22.0 bits), Expect = 1.3e-73, Sum P(5) = 1.3e-73
Identities = 23/81 (28%), Positives = 38/81 (46%)
Query: 855 VYRDDLSCSALQLEKEQKNVDISDKRSGIIIQVAVGERVANSDASPAIGAENSHGRTGSE 914
+Y+ D + L+ E + VD V ER+AN PA+G + GR+ S
Sbjct: 1670 IYKIDCRVTIELLDSEPEEVDKPAALKAQKFSKYV-ERLAN----PALGGGGNTGRSDSA 1724
Query: 915 MMSASLRPCDAAKDDLKHEAN 935
+ + S+ D + D+K EA+
Sbjct: 1725 LGNDSV--VDGS--DIKTEAD 1741
Score = 41 (19.5 bits), Expect = 4.6e-89, Sum P(6) = 4.6e-89
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 20 TAPPRGESYGLSPQL 34
T PP+G+S +P+L
Sbjct: 256 TTPPQGQSGNATPRL 270
Score = 41 (19.5 bits), Expect = 5.2e-23, Sum P(5) = 5.2e-23
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 541 FKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINEN 587
F+H RRN+ E+ + +D + S S+T N+ N N
Sbjct: 1781 FEH-RRNRIEQHGTAASLEPISVDSAISSNSTTGGGGSGTNNNNNNN 1826
Score = 40 (19.1 bits), Expect = 1.3e-37, Sum P(6) = 1.3e-37
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 683 NLSTKSLVAEIKQFKENKQTEDDVL 707
NLS + IK + N+Q ++ V+
Sbjct: 716 NLSAVNTSVSIKTYNNNQQQQNHVI 740
Score = 39 (18.8 bits), Expect = 1.6e-37, Sum P(6) = 1.6e-37
Identities = 17/85 (20%), Positives = 31/85 (36%)
Query: 789 SGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTELNNLCRTALSNGDTITKEN 848
SG+ S S+ V +D P T++ I+ + S +L T L D
Sbjct: 653 SGQYMSKSASVHNDHGKRPTATLSGGAHITMSSASPAPSGSPLHLGATTLPQIDKSAHAA 712
Query: 849 VLDSDRVYRDDLSCSALQLEKEQKN 873
+ + +S ++Q+N
Sbjct: 713 AIGNLSAVNTSVSIKTYNNNQQQQN 737
Score = 38 (18.4 bits), Expect = 1.4e-72, Sum P(5) = 1.4e-72
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 779 GAEDAGKARHSGKNNSASSMVE 800
G AGKAR +N S ++E
Sbjct: 1753 GIGGAGKARFLVRNKRRSKLLE 1774
>UNIPROTKB|F1PH07 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 EMBL:AAEX03016328 EMBL:AAEX03016329
Ensembl:ENSCAFT00000028626 Uniprot:F1PH07
Length = 959
Score = 498 (180.4 bits), Expect = 4.0e-87, Sum P(6) = 4.0e-87
Identities = 115/313 (36%), Positives = 173/313 (55%)
Query: 479 KEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSED 538
KE+ E+D ++C+R SYR LP Y P + R+ L +VLND WVS S SED
Sbjct: 485 KERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSED 544
Query: 539 YSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLK 598
+F ++ QYEE ++RCED+RFELD++LE+ +T + E + ++ + F L
Sbjct: 545 STFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLD 604
Query: 599 DHFSA----LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFN 654
+ ++ + ++R+Y D D++D LRKNP+IA+P++L RLK K+EEW + + FN
Sbjct: 605 NTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFN 664
Query: 655 KVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQ---TEDDVLFVIA 711
KVW E K + KSLDH+ FKQ D+K L +KSL+ EI+ + +Q TED+
Sbjct: 665 KVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEDN------ 718
Query: 712 AGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSV 770
AG P+ PHL Y D I ED L+ + + K+ K ++ F+ +L
Sbjct: 719 AG--VPIGPHLSLAYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFA 776
Query: 771 PSRP-SDVEGAED 782
SDVE E+
Sbjct: 777 QRGDLSDVEEEEE 789
Score = 225 (84.3 bits), Expect = 4.0e-87, Sum P(6) = 4.0e-87
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
Q+L DAL+YL +VK F Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH +L
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL 178
Query: 134 IFGFNTFLPKGYEITLDEDE 153
I GFNTFLP GY+I + ++
Sbjct: 179 IMGFNTFLPPGYKIEVQTND 198
Score = 122 (48.0 bits), Expect = 1.7e-68, Sum P(5) = 1.7e-68
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 160 VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLE 219
++ E+A+++++++K +F + VY FL+I+ ++ + D V S V+ LF+ H DL+
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180
Query: 220 EFTRFLP 226
F FLP
Sbjct: 181 GFNTFLP 187
Score = 119 (46.9 bits), Expect = 4.0e-87, Sum P(6) = 4.0e-87
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K ++ +++ + + D Y F+ + +LLDG+ID++++ED R + +Y+ FT
Sbjct: 887 KSDSPAIQLRLKEPMDVDVEDYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFT 946
Query: 1224 LDKLLYRLCKQLQ 1236
+DKL+ + +Q++
Sbjct: 947 MDKLIQSIVRQVR 959
Score = 115 (45.5 bits), Expect = 4.0e-87, Sum P(6) = 4.0e-87
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 147 ITLDEDEAPP---KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEV 203
+T+ AP + VEF AI +VNKIK RF +YK+FLEIL+ Y+ K E
Sbjct: 286 VTISLGTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQLLSKTTAE- 344
Query: 204 YSEVASLFEDHADLLEE 220
+V S+ DH +++
Sbjct: 345 --KVDSVRNDHGGTVKK 359
Score = 114 (45.2 bits), Expect = 4.0e-87, Sum P(6) = 4.0e-87
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 352 SLASYDDKDALKSIYNQGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVT 410
SL DA K +F DKV++ L S + Y+ FL+CL I++ +I R +L LV+
Sbjct: 396 SLKDSSMADASKHGVGTESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVS 455
Query: 411 DLLGKYMDLMDEFNHFFERCENI 433
LGK+ +L + F +F E++
Sbjct: 456 PFLGKFPELFNWFKNFLGYKESV 478
Score = 71 (30.1 bits), Expect = 3.4e-63, Sum P(5) = 3.4e-63
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKD 125
+Q + + A+ Y+ ++K+ FQ Q + Y FLE++ ++ TA + V++
Sbjct: 299 NQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQLLSKTTAEKVDSVRN 351
Score = 63 (27.2 bits), Expect = 4.0e-87, Sum P(6) = 4.0e-87
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 1092 EADGMADQHF-VGGDCMSLPMSERFLLSVKPLAKFVPATSVEERKDCRVFYGNDDFYVLF 1150
EA G A +H VGG P + L S K ++E + +FY N+++Y+
Sbjct: 796 EATGAAKKHNGVGGS----PPKSKLLFSNTAAQKL---RGMDEVYN--LFYVNNNWYIFM 846
Query: 1151 RLHQTLYERI 1160
RLHQ L R+
Sbjct: 847 RLHQILCLRL 856
Score = 53 (23.7 bits), Expect = 6.6e-73, Sum P(5) = 6.6e-73
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIY 395
+N + +K+K + D Y+AFL+ LH Y
Sbjct: 304 FNHAINYVNKIKNRFQGQPDIYKAFLEILHTY 335
Score = 52 (23.4 bits), Expect = 8.4e-73, Sum P(5) = 8.4e-73
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 168 FVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFL 225
F +K++K + E Y++FL L ++ +E E+ V+ +L F FL
Sbjct: 416 FFDKVRKALRSAE-AYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 472
Score = 39 (18.8 bits), Expect = 2.8e-52, Sum P(4) = 2.8e-52
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+ D+VK + S Y FL + + + I + + V+ L + DL+ FN F
Sbjct: 129 YLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTF 185
Score = 38 (18.4 bits), Expect = 2.1e-34, Sum P(5) = 2.1e-34
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 446 LCNDGHVSRSVKIEDKDREHKRE-MEVTKEK 475
+C+ R ++ E+++RE +RE + + ++K
Sbjct: 859 ICSQAE--RQIEEENREREWEREVLGIKRDK 887
Score = 38 (18.4 bits), Expect = 3.2e-29, Sum P(5) = 3.2e-29
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 331 LQRFPDKKKSIKKVEGFGANSSLASYDDKDALKSIYNQGFIF 372
L+R K++ ++ + G N ++K LKS+ +QG F
Sbjct: 646 LKRLKMKEEEWREAQR-GFNKVWREQNEKYYLKSLDHQGINF 686
>UNIPROTKB|O75182 [details] [associations]
symbol:SIN3B "Paired amphipathic helix protein Sin3b"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000805 "X chromosome"
evidence=IEA] [GO:0000806 "Y chromosome" evidence=IEA] [GO:0001741
"XY body" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007519
"skeletal muscle tissue development" evidence=IEA] [GO:0030849
"autosome" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048738 "cardiac
muscle tissue development" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005737
GO:GO:0003714 GO:GO:0045892
Pathway_Interaction_DB:telomerasepathway GO:GO:0005654
GO:GO:0044281 GO:GO:0044255 GO:GO:0006351 GO:GO:0003682
GO:GO:0048738 EMBL:CH471106
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001741
GO:GO:0007519 GO:GO:0000805 GO:GO:0000806 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0030849 eggNOG:COG5602 InterPro:IPR013194
Pfam:PF08295 SMART:SM00761 HOVERGEN:HBG060425 EMBL:AY706204
EMBL:AB014600 EMBL:BC005113 EMBL:BC025026 EMBL:BC063531
EMBL:BC110821 IPI:IPI00464980 IPI:IPI00607589 IPI:IPI00607724
RefSeq:NP_056075.1 UniGene:Hs.13999 ProteinModelPortal:O75182
SMR:O75182 IntAct:O75182 STRING:O75182 PhosphoSite:O75182
PaxDb:O75182 PRIDE:O75182 DNASU:23309 Ensembl:ENST00000248054
Ensembl:ENST00000379803 GeneID:23309 KEGG:hsa:23309 UCSC:uc002new.3
UCSC:uc002ney.2 UCSC:uc002nez.2 CTD:23309 GeneCards:GC19P016940
HGNC:HGNC:19354 HPA:HPA050329 MIM:607777 neXtProt:NX_O75182
PharmGKB:PA134909030 HOGENOM:HOG000230688 InParanoid:O75182
OMA:DVYSLFF OrthoDB:EOG4ZGPBH GenomeRNAi:23309 NextBio:45174
Bgee:O75182 CleanEx:HS_SIN3B Genevestigator:O75182
GermOnline:ENSG00000127511 Uniprot:O75182
Length = 1162
Score = 495 (179.3 bits), Expect = 3.2e-86, Sum P(6) = 3.2e-86
Identities = 150/473 (31%), Positives = 228/473 (48%)
Query: 368 QGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
Q F F DKV+ L S + Y+ FL+C+ +++ ++ ++L LV+ LGK+ +L +F F
Sbjct: 306 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 365
Query: 427 FERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKEKYYAKS 486
E F A MS +S DG +SR + R + K + K
Sbjct: 366 LGVKEL--SF-APPMSDRS--GDG-ISREIDYASCKRIGSSYRALPKTYQQPKCSGRTAI 419
Query: 487 IQELDLSNCQRCTPSYRLLPDDYPIPSASQRSEL---GAQVLNDHWVSVTSGSEDYSFKH 543
+ELD T DDY + + A VLND WVS S SED +F
Sbjct: 420 CKELD-----HWTLLQGSWTDDYCMSKFKNTCWIPGYSAGVLNDTWVSFPSWSEDSTFVS 474
Query: 544 MRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFSA 603
++ YEE L RCED+RFELD++LE+ +T + E + ++ + F L D
Sbjct: 475 SKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDSLGG 534
Query: 604 ----LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAE 659
+ R I R+YGD ++++ L+KNP A+PV+L RLK K+EEW + + FNK+W E
Sbjct: 535 TSEVIQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWRE 594
Query: 660 IYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVI 719
Y K + KSLDH++ FKQ D+K L +KSL+ EI+ + Q + + G P
Sbjct: 595 QYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQH------SEGRSAPSS 648
Query: 720 -PHLEYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSVPSRPSDV 777
PHL + Y D I ED L+ Y + + K+ +L F+ P L S+ D+
Sbjct: 649 EPHLIFVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLLHQFV-PSLFF-SQQLDL 706
Query: 778 EGAED-AGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTE 829
+E+ A + R S + + +PGP +S P G + +TE
Sbjct: 707 GASEESADEDRDSPQGQTTDPSERKKPAPGP----HSSPPEEKGAFGDAPATE 755
Score = 191 (72.3 bits), Expect = 3.2e-86, Sum P(6) = 3.2e-86
Identities = 39/73 (53%), Positives = 48/73 (65%)
Query: 80 DALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNT 139
DALTYL +VK F Y+ FLE+MK+FK+Q DT GVI RV LF H +LI GFN
Sbjct: 43 DALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNA 102
Query: 140 FLPKGYEITLDED 152
FLP GY I + ++
Sbjct: 103 FLPLGYRIDIPKN 115
Score = 183 (69.5 bits), Expect = 3.2e-86, Sum P(6) = 3.2e-86
Identities = 45/111 (40%), Positives = 66/111 (59%)
Query: 150 DEDEAPPKK-TVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDIN------- 201
D+ + P + +VEF AI++VNKIK RF + +Y+SFLEIL+ Y+KE +
Sbjct: 149 DKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGM 208
Query: 202 ---EVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQRGNE 249
EV++EVA+LF DLL EF +FLP+ + + N P +S Q+ NE
Sbjct: 209 SEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQK-NE 258
Score = 146 (56.5 bits), Expect = 3.2e-86, Sum P(6) = 3.2e-86
Identities = 37/140 (26%), Positives = 72/140 (51%)
Query: 1171 EMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYR 1230
E++ + E + Y F+ + +LL+GSID ++ED R + +YV FT+DKL+
Sbjct: 833 ELRLKQPSEVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLVQN 892
Query: 1231 LCKQLQTVAADEMDNKLIQLYEYEESR-KPGKQIDS---------VYYENARVLLHEENI 1280
+ +QL + +D++ K+++LY E+ R G + S Y A + +EN
Sbjct: 893 IARQLHHLVSDDVCLKVVELYLNEKKRGAAGGNLSSRCVRAARETSYQWKAERCMADENC 952
Query: 1281 YRIQLSSSPSR--LSIQLMD 1298
+++ + ++I+L+D
Sbjct: 953 FKVMFLQRKGQVIMTIELLD 972
Score = 133 (51.9 bits), Expect = 2.0e-65, Sum P(5) = 2.0e-65
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 157 KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHAD 216
K V E+A+T+++++K RF +D Y FLEI+ ++ + D V V+ LF +H D
Sbjct: 36 KLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPD 95
Query: 217 LLEEFTRFLP 226
L+ F FLP
Sbjct: 96 LIVGFNAFLP 105
Score = 99 (39.9 bits), Expect = 6.5e-62, Sum P(5) = 6.5e-62
Identities = 23/81 (28%), Positives = 43/81 (53%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAG----------VIAR 122
S + ++A++Y+ ++K F D E Y FLE++ ++ ++ +T G V
Sbjct: 157 SDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTE 216
Query: 123 VKDLFKGHNNLIFGFNTFLPK 143
V +LF+G +L+ F FLP+
Sbjct: 217 VANLFRGQEDLLSEFGQFLPE 237
Score = 66 (28.3 bits), Expect = 3.2e-86, Sum P(6) = 3.2e-86
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 1139 VFYGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKE 1179
+F+ N+++Y RLHQTL R+ ++ RT KE
Sbjct: 774 LFFANNNWYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKE 814
Score = 60 (26.2 bits), Expect = 1.6e-24, Sum P(5) = 1.6e-24
Identities = 14/62 (22%), Positives = 32/62 (51%)
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTR 223
+ +F +K+++ + E VY++FL + ++ +E +E+ V+ +L +F
Sbjct: 306 QEFSFFDKVRRVLKSQE-VYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKS 364
Query: 224 FL 225
FL
Sbjct: 365 FL 366
Score = 58 (25.5 bits), Expect = 3.2e-86, Sum P(6) = 3.2e-86
Identities = 9/40 (22%), Positives = 24/40 (60%)
Query: 1350 ELSAACMAMEGVQLVNGLECRIACNSYKITYVLDTEDVFY 1389
E ++ + GV+ ++CR +++K+ +++++ED Y
Sbjct: 1037 EARSSWKRLVGVESACDVDCRFKLSTHKMVFIVNSEDYMY 1076
Score = 54 (24.1 bits), Expect = 1.4e-08, Sum P(5) = 1.4e-08
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFER 429
+ D+VK + SD Y FL+ + + + I + V+ L ++ DL+ FN F
Sbjct: 47 YLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPL 106
Query: 430 CENID 434
ID
Sbjct: 107 GYRID 111
Score = 49 (22.3 bits), Expect = 5.0e-23, Sum P(6) = 5.0e-23
Identities = 24/115 (20%), Positives = 45/115 (39%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIY------SNGI----IKRNDLQNLVTDLL 413
+N + +K+K + + Y++FL+ LH Y + G + ++ V +L
Sbjct: 162 FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVANLF 221
Query: 414 GKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKRE 468
DL+ EF F + + + C V ++ DK EH R+
Sbjct: 222 RGQEDLLSEFGQFLPEAKR------SLFTGNGPCEMHSVQKNE--HDKTPEHSRK 268
Score = 38 (18.4 bits), Expect = 1.8e-36, Sum P(6) = 1.8e-36
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 849 VLDSDRVYRDDLSCSAL 865
VL S VY + L C AL
Sbjct: 317 VLKSQEVYENFLRCIAL 333
Score = 37 (18.1 bits), Expect = 5.9e-07, Sum P(5) = 5.9e-07
Identities = 15/56 (26%), Positives = 22/56 (39%)
Query: 724 YGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPSRPSDVEG 779
+G S S HE L V+ + + K + + FLE M S+ D G
Sbjct: 26 WGRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPG 81
>UNIPROTKB|F1S9U7 [details] [associations]
symbol:SIN3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] [GO:0000806 "Y chromosome" evidence=IEA] [GO:0000805
"X chromosome" evidence=IEA] [GO:0048738 "cardiac muscle tissue
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0030849 "autosome"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0003682
GO:GO:0048738 GO:GO:0001741 GO:GO:0007519 GO:GO:0000805
GO:GO:0000806 Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0030849
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 OMA:DVYSLFF EMBL:CU915550
Ensembl:ENSSSCT00000015147 Uniprot:F1S9U7
Length = 1141
Score = 493 (178.6 bits), Expect = 7.4e-79, Sum P(6) = 7.4e-79
Identities = 123/349 (35%), Positives = 182/349 (52%)
Query: 488 QELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRN 547
+E+D ++C+R SYR LP Y P S R+ + +VLND WVS S SED +F ++
Sbjct: 403 REIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKT 462
Query: 548 QYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFSA---- 603
YEE L RCED+RFELD++LE+ +T + E + ++ + F L D
Sbjct: 463 PYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSEV 522
Query: 604 LNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAK 663
+ R I R+YGD ++++ L+KNP A+PV+L RLK K+EEW + + FNK+W E Y K
Sbjct: 523 IQRRAIHRIYGDKAPEIIESLKKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEK 582
Query: 664 NHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVI-PHL 722
+ KSLDH++ FKQ D+K L +KSL+ EI+ + Q + + G P PHL
Sbjct: 583 AYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQH------SEGRSAPSSEPHL 636
Query: 723 EYGYSDSNIHEDLYKLVQYSCEEMCST-KDQLNKAMKLWTTFLEPMLSVPSRPSDVEGAE 781
+ Y D I ED L+ Y + + K+ +L F+ P L S+ D+ +E
Sbjct: 637 IFVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLVHQFV-PSLFF-SQQLDLGASE 694
Query: 782 D-AGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTE 829
D A + R S + S +PGP S P G E ++ E
Sbjct: 695 DSADEGRGSPQGQSTDPGDRKKPAPGPQ----SSPPEEKGAAGEASAAE 739
Score = 191 (72.3 bits), Expect = 7.4e-79, Sum P(6) = 7.4e-79
Identities = 39/73 (53%), Positives = 48/73 (65%)
Query: 80 DALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNT 139
DALTYL +VK F Y+ FLE+MK+FK+Q DT GVI RV LF H +LI GFN
Sbjct: 39 DALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNA 98
Query: 140 FLPKGYEITLDED 152
FLP GY I + ++
Sbjct: 99 FLPLGYRIDIPKN 111
Score = 183 (69.5 bits), Expect = 4.9e-78, Sum P(6) = 4.9e-78
Identities = 51/140 (36%), Positives = 76/140 (54%)
Query: 118 GVIARVKDLFKGHNNLIFGFNTFLPKGYEITLDEDEAPPKK-TVEFEEAITFVNKIKKRF 176
GV A K+ H++ F +P Y+ D+ + P + +VEF AI++VNKIK RF
Sbjct: 138 GVFAG-KENSHNHSDCAENFKQQMP--YKE--DKPQVPLESDSVEFNNAISYVNKIKTRF 192
Query: 177 HNDEHVYKSFLEILNMYRKEHKDIN----------EVYSEVASLFEDHADLLEEFTRFLP 226
+ +Y+SFLEIL+ Y+KE EV++EVA+LF DLL EF +FLP
Sbjct: 193 LDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLP 252
Query: 227 DTSATSLSHNIPFVRNSTQR 246
+ + + N P +S Q+
Sbjct: 253 EAKRSLFTGNGPCEMSSVQK 272
Score = 150 (57.9 bits), Expect = 7.4e-79, Sum P(6) = 7.4e-79
Identities = 39/147 (26%), Positives = 74/147 (50%)
Query: 1164 KMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFT 1223
K N E++ + E + Y F+ + +LL+GSID ++ED R + +YV FT
Sbjct: 806 KGNDPAMELRLKQPSEVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFT 865
Query: 1224 LDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESR-KPGKQIDS---------VYYENARV 1273
+DKL+ + +QL + +D++ K+++LY E+ R G + S Y A
Sbjct: 866 MDKLVQSIARQLHHLVSDDVCLKVVELYLNEKKRGAAGGNLSSRCVRAARETSYQWKAER 925
Query: 1274 LLHEENIYRIQLSSSPSR--LSIQLMD 1298
+ +EN +++ + ++I+L+D
Sbjct: 926 CMADENCFKVMFLQRKGQVIMTIELLD 952
Score = 133 (51.9 bits), Expect = 7.3e-73, Sum P(6) = 7.3e-73
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 157 KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHAD 216
K V E+A+T+++++K RF +D Y FLEI+ ++ + D V V+ LF +H D
Sbjct: 32 KLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPD 91
Query: 217 LLEEFTRFLP 226
L+ F FLP
Sbjct: 92 LIVGFNAFLP 101
Score = 106 (42.4 bits), Expect = 7.4e-79, Sum P(6) = 7.4e-79
Identities = 31/90 (34%), Positives = 50/90 (55%)
Query: 368 QGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
Q F F DKV+ L S + Y+ FL+C+ +++ ++ ++L LV+ LGK+ +L +F F
Sbjct: 322 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 381
Query: 427 FERCENIDGFLAGVMSKKSLCNDGHVSRSV 456
E F A MS +S DG +SR +
Sbjct: 382 LGVKEL--SF-APPMSDRS--GDG-ISREI 405
Score = 98 (39.6 bits), Expect = 3.6e-69, Sum P(6) = 3.6e-69
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAG----------VIAR 122
S + ++A++Y+ ++K F D E Y FLE++ ++ ++ T G V
Sbjct: 173 SDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTE 232
Query: 123 VKDLFKGHNNLIFGFNTFLPK 143
V +LF+G +L+ F FLP+
Sbjct: 233 VANLFRGQEDLLSEFGQFLPE 253
Score = 68 (29.0 bits), Expect = 7.4e-79, Sum P(6) = 7.4e-79
Identities = 22/95 (23%), Positives = 37/95 (38%)
Query: 1085 GKAESEGEADGMADQHFVGGDCMSLPMSERFLLSVKPLAKFVPATSVEERKDCRVFYGND 1144
G+ +G++ D+ S P E+ A+ P +F+ N+
Sbjct: 700 GRGSPQGQSTDPGDRKKPAPGPQSSPPEEKGAAGEASAAEQQPPQHKPLDDVYSLFFANN 759
Query: 1145 DFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKE 1179
++Y RLHQTL R+ ++ RT KE
Sbjct: 760 NWYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKE 794
Score = 60 (26.2 bits), Expect = 4.2e-74, Sum P(6) = 4.2e-74
Identities = 14/62 (22%), Positives = 32/62 (51%)
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTR 223
+ +F +K+++ + E VY++FL + ++ +E +E+ V+ +L +F
Sbjct: 322 QEFSFFDKVRRVLKSQE-VYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKS 380
Query: 224 FL 225
FL
Sbjct: 381 FL 382
Score = 59 (25.8 bits), Expect = 7.4e-79, Sum P(6) = 7.4e-79
Identities = 9/40 (22%), Positives = 24/40 (60%)
Query: 1350 ELSAACMAMEGVQLVNGLECRIACNSYKITYVLDTEDVFY 1389
E ++ + GV+ ++CR +++K+ +++++ED Y
Sbjct: 1016 EAKSSWKRLVGVESACNVDCRFKLSTHKMMFIVNSEDYMY 1055
Score = 54 (24.1 bits), Expect = 7.4e-58, Sum P(5) = 7.4e-58
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 372 FCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFER 429
+ D+VK + SD Y FL+ + + + I + V+ L ++ DL+ FN F
Sbjct: 43 YLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPL 102
Query: 430 CENID 434
ID
Sbjct: 103 GYRID 107
Score = 51 (23.0 bits), Expect = 3.6e-73, Sum P(6) = 3.6e-73
Identities = 25/124 (20%), Positives = 49/124 (39%)
Query: 366 YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIYSNGII--KRNDLQNL--------VTDLL 413
+N + +K+K + + Y++FL+ LH Y + K + + V +L
Sbjct: 178 FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLF 237
Query: 414 GKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTK 473
DL+ EF F + + + C V +S EH++ +E +K
Sbjct: 238 RGQEDLLSEFGQFLPEAKR------SLFTGNGPCEMSSVQKS--------EHEKNLEHSK 283
Query: 474 EKDR 477
++ R
Sbjct: 284 KRSR 287
Score = 45 (20.9 bits), Expect = 9.2e-24, Sum P(5) = 9.2e-24
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 820 GNGDENTSTELNNLCRTALSNGDTITK--ENVLDSDR-VYRDDLSC--SALQLEKEQKNV 874
G +E TE+ NL R D +++ + + ++ R ++ + C S++Q + +KN+
Sbjct: 223 GMSEEEVFTEVANLFR---GQEDLLSEFGQFLPEAKRSLFTGNGPCEMSSVQKSEHEKNL 279
Query: 875 DISDKRS 881
+ S KRS
Sbjct: 280 EHSKKRS 286
Score = 40 (19.1 bits), Expect = 2.9e-23, Sum P(5) = 2.9e-23
Identities = 24/95 (25%), Positives = 36/95 (37%)
Query: 771 PSRPSDVEGAEDAGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTEL 830
P S V+ +E HS K S S++ +P + + G D + +T
Sbjct: 264 PCEMSSVQKSEHEKNLEHS-KKRSRPSLLRPVSAPA-----KKKMKLR-GTKDLSIATVG 316
Query: 831 NNLCRTALSNGDTITKENVLDSDRVYRDDLSCSAL 865
S D + + VL S VY + L C AL
Sbjct: 317 KYGTLQEFSFFDKVRR--VLKSQEVYENFLRCIAL 349
Score = 37 (18.1 bits), Expect = 2.3e-08, Sum P(5) = 2.3e-08
Identities = 15/56 (26%), Positives = 22/56 (39%)
Query: 724 YGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPSRPSDVEG 779
+G S S HE L V+ + + K + + FLE M S+ D G
Sbjct: 22 WGRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPG 77
>SGD|S000005364 [details] [associations]
symbol:SIN3 "Component of the Sin3p-Rpd3p histone deacetylase
complex" species:4932 "Saccharomyces cerevisiae" [GO:0070210
"Rpd3L-Expanded complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032221 "Rpd3S complex"
evidence=IDA] [GO:0061186 "negative regulation of chromatin
silencing at silent mating-type cassette" evidence=IMP] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IMP]
[GO:0031939 "negative regulation of chromatin silencing at
telomere" evidence=IMP] [GO:0016479 "negative regulation of
transcription from RNA polymerase I promoter" evidence=IMP]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IGI] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0051301 "cell division"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0070822 "Sin3-type complex"
evidence=IDA] [GO:0003714 "transcription corepressor activity"
evidence=IMP;IPI] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0003713 "transcription coactivator activity"
evidence=IMP] [GO:0061408 "positive regulation of transcription
from RNA polymerase II promoter in response to heat stress"
evidence=IMP] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IMP] [GO:0051038 "negative
regulation of transcription during meiosis" evidence=IMP]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 SGD:S000005364
GO:GO:0003714 EMBL:BK006948 GO:GO:0051301 GO:GO:0006351
GO:GO:0000122 GO:GO:0003713 GO:GO:0061408 GO:GO:0033698
GO:GO:0070210 GO:GO:0006303 GO:GO:0000117 GO:GO:0016575
GO:GO:0051038 GO:GO:0030174 GO:GO:0032221 GO:GO:0061188
GO:GO:0061186 GO:GO:0031939 Gene3D:1.20.1160.11 SUPFAM:SSF47762
GO:GO:0016479 eggNOG:COG5602 KO:K11644 OMA:NDEWASH
OrthoDB:EOG4X3M8D InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 EMBL:M36822 EMBL:Z74746 PIR:S66686
RefSeq:NP_014639.1 ProteinModelPortal:P22579 SMR:P22579
DIP:DIP-597N IntAct:P22579 MINT:MINT-422975 STRING:P22579
PaxDb:P22579 PeptideAtlas:P22579 EnsemblFungi:YOL004W GeneID:854158
KEGG:sce:YOL004W CYGD:YOL004w HOGENOM:HOG000248545 NextBio:975926
Genevestigator:P22579 GermOnline:YOL004W Uniprot:P22579
Length = 1536
Score = 396 (144.5 bits), Expect = 9.4e-79, Sum P(6) = 9.4e-79
Identities = 107/322 (33%), Positives = 161/322 (50%)
Query: 490 LDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVS-VTSGSEDYSFKHMRRNQ 548
LDL C+ PSY+ LP S R ++ +VLND WV SED F R+NQ
Sbjct: 743 LDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGHPVWASEDSGFIAHRKNQ 802
Query: 549 YEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSIN---EN-KITLETPFHLKDHFSAL 604
YEE+LF+ E++R E D +ES T + E ++N I EN K + P L +
Sbjct: 803 YEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENEKANFKLPPGLGHTSMTI 862
Query: 605 NLRCIERLYG-DHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAK 663
+ I ++Y + G +++D L ++PA+ PV+L RLKQK EEW + + ++NKVW E+ K
Sbjct: 863 YKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEWRRAQREWNKVWRELEQK 922
Query: 664 NHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVIPHLE 723
+KSLDH FKQ D K L+TK L++EI K + QT + ++ Q L+
Sbjct: 923 VFFKSLDHLGLTFKQADKKLLTTKQLISEISSIKVD-QTNKKIHWLTPKPKSQ-----LD 976
Query: 724 YGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMK-LWTTFLEPMLSVPSRPSDVEGAED 782
+ + D NI D+ L + + + +K L F+ S+ E E+
Sbjct: 977 FDFPDKNIFYDILCLADTFITHTTAYSNPDKERLKDLLKYFISLFFSI-----SFEKIEE 1031
Query: 783 AGKARHSGKNNSASSMVESDGS 804
+ +S K N + S DGS
Sbjct: 1032 S---LYSHKQNVSESSGSDDGS 1050
Score = 232 (86.7 bits), Expect = 9.4e-79, Sum P(6) = 9.4e-79
Identities = 48/109 (44%), Positives = 70/109 (64%)
Query: 141 LPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDI 200
+P+ + ED A VEF +AI++VNKIK RF + +YK FLEIL Y++E K I
Sbjct: 388 IPQSQSLVPQED-AKKNVDVEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPI 446
Query: 201 NEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQRGNE 249
NEVY++V LF++ DLLE+F +FLPD+SA S + + + Q+ +E
Sbjct: 447 NEVYAQVTHLFQNAPDLLEDFKKFLPDSSA-SANQQVQHAQQHAQQQHE 494
Score = 210 (79.0 bits), Expect = 9.4e-79, Sum P(6) = 9.4e-79
Identities = 41/81 (50%), Positives = 55/81 (67%)
Query: 76 LTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIF 135
L DAL+YL++VK F + + Y++FL++MKDFK+Q DT GVI RV LF+G+ LI
Sbjct: 219 LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 278
Query: 136 GFNTFLPKGYEITLDEDEAPP 156
GFNTFLP+GY I + P
Sbjct: 279 GFNTFLPQGYRIECSSNPDDP 299
Score = 124 (48.7 bits), Expect = 9.4e-79, Sum P(6) = 9.4e-79
Identities = 32/129 (24%), Positives = 63/129 (48%)
Query: 1184 DLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEM 1243
D Y + + L++G +++ FE+ R N+++ L+T+DK+ L K T+ D
Sbjct: 1202 DAYKQVLRLSRRLINGDLEHQWFEESLRQAYNNKAFKLYTIDKVTQSLVKHAHTLMTDAK 1261
Query: 1244 DNKLIQLYEYEESRKPGKQIDSVYYENARVLLH---EENIYRIQLSSSPSRLSIQ---LM 1297
+++ L+ + + D + Y +V H EN++RI+ +SIQ L
Sbjct: 1262 TAEIMALFVKDRNASTTSAKDQIIYR-LQVRSHMSNTENMFRIEFDKRTLHVSIQYIALD 1320
Query: 1298 DNVIEKPEA 1306
D +++P+A
Sbjct: 1321 DLTLKEPKA 1329
Score = 108 (43.1 bits), Expect = 8.5e-63, Sum P(5) = 8.5e-63
Identities = 24/87 (27%), Positives = 43/87 (49%)
Query: 151 EDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASL 210
E P + + E +TF K K R+ ++H+Y FL+ILN+Y ++ D++++ +V
Sbjct: 651 EPTEPIENNISLNEEVTFFEKAK-RYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDFY 709
Query: 211 FEDHADLLEEFTRFLPDTSATSLSHNI 237
+ +L F F+ T NI
Sbjct: 710 LGSNKELFTWFKNFVGYQEKTKCIENI 736
Score = 104 (41.7 bits), Expect = 7.4e-52, Sum P(5) = 7.4e-52
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 79 SDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFN 138
S A++Y+ ++K F DQ + Y FLE+++ ++ ++ V A+V LF+ +L+ F
Sbjct: 409 SQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDFK 468
Query: 139 TFLP 142
FLP
Sbjct: 469 KFLP 472
Score = 101 (40.6 bits), Expect = 3.7e-48, Sum P(6) = 3.7e-48
Identities = 21/85 (24%), Positives = 44/85 (51%)
Query: 152 DEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLF 211
DE + + ++A++++ ++K +F + +Y FL+I+ ++ + D V V++LF
Sbjct: 211 DEDADYRPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLF 270
Query: 212 EDHADLLEEFTRFLPDTSATSLSHN 236
+ L++ F FLP S N
Sbjct: 271 RGYPILIQGFNTFLPQGYRIECSSN 295
Score = 74 (31.1 bits), Expect = 9.4e-79, Sum P(6) = 9.4e-79
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 367 NQGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNH 425
N+ F +K K + + Y FLK L++YS I+ +DL V LG +L F +
Sbjct: 663 NEEVTFFEKAKRYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDFYLGSNKELFTWFKN 722
Query: 426 F 426
F
Sbjct: 723 F 723
Score = 72 (30.4 bits), Expect = 4.4e-59, Sum P(6) = 4.4e-59
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 359 KDALKSI---YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIYSNGIIKRNDLQNLVTDLL 413
+DA K++ ++Q + +K+K + D Y+ FL+ L Y N++ VT L
Sbjct: 398 EDAKKNVDVEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLF 457
Query: 414 GKYMDLMDEFNHF 426
DL+++F F
Sbjct: 458 QNAPDLLEDFKKF 470
Score = 62 (26.9 bits), Expect = 6.4e-40, Sum P(6) = 6.4e-40
Identities = 36/159 (22%), Positives = 70/159 (44%)
Query: 342 KKVEGFGANSSLASYDDKDALKSIYNQGFIFCDKVKEKLCSDDYQAFLKCLHIYSNGII- 400
+K + + N L Y + + ++Y+Q + D + EK+ D Y K L + +
Sbjct: 670 EKAKRYIGNKHL--YTEFLKILNLYSQDILDLDDLVEKV--DFYLGSNKELFTWFKNFVG 725
Query: 401 ---KRNDLQNLVTDLLGKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLC----NDGHVS 453
K ++N+V + +DL + F ++R D F+ + +C ND V
Sbjct: 726 YQEKTKCIENIVHEKHRLDLDLCEAFGPSYKRLPKSDTFMP-CSGRDDMCWEVLNDEWVG 784
Query: 454 RSV-KIEDKD----REHKREMEVTK-EKDRYKEKYYAKS 486
V ED R+++ E + K E++R++ +Y +S
Sbjct: 785 HPVWASEDSGFIAHRKNQYEETLFKIEEERHEYDFYIES 823
Score = 53 (23.7 bits), Expect = 9.4e-79, Sum P(6) = 9.4e-79
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1141 YGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKE 1179
+ N + Y+ FR T+YER+ K +M R +KE
Sbjct: 1139 FANTNIYIFFRHWTTIYERLLEIK------QMNERVTKE 1171
Score = 44 (20.5 bits), Expect = 2.7e-59, Sum P(6) = 2.7e-59
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 251 SAGIPPLRQMQMDKHRR 267
S+G+P ++Q +M HR+
Sbjct: 371 SSGLPSIQQPEMPAHRQ 387
Score = 41 (19.5 bits), Expect = 3.9e-41, Sum P(6) = 3.9e-41
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 530 VSVTSGSEDYSFKHMRRNQYEESL 553
VS +SGS+D S R+ Y++ +
Sbjct: 1040 VSESSGSDDGSSIASRKRPYQQEM 1063
Score = 40 (19.1 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 182 VYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLL 218
+Y+ LEI M + K+IN S V F DLL
Sbjct: 1154 IYERLLEIKQMNERVTKEIN-TRSTVT--FAKDLDLL 1187
Score = 37 (18.1 bits), Expect = 1.2e-18, Sum P(4) = 1.2e-18
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 991 GDF-EEDNFGVYGDAAVKTLPKAKHGVESRQYQSKN 1025
G F E D GV + V +P + + E Q Q ++
Sbjct: 329 GSFPESDGNGVQQPSNVPMVPSSVYQSEQNQDQQQS 364
>POMBASE|SPBC12C2.10c [details] [associations]
symbol:pst1 "Clr6 histone deacetylase complex subunit
Pst1" species:4896 "Schizosaccharomyces pombe" [GO:0003714
"transcription corepressor activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005721 "centromeric heterochromatin" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0016575 "histone
deacetylation" evidence=IGI] [GO:0030261 "chromosome condensation"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698
"Rpd3L complex" evidence=IDA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 PomBase:SPBC12C2.10c GO:GO:0003714 GO:GO:0051301
EMBL:CU329671 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0005721 GO:GO:0030261
GO:GO:0033698 GO:GO:0016575 GO:GO:0032221 Gene3D:1.20.1160.11
SUPFAM:SSF47762 EMBL:AF280407 PIR:T39371 RefSeq:NP_596012.2
ProteinModelPortal:Q09750 SMR:Q09750 DIP:DIP-29340N IntAct:Q09750
STRING:Q09750 EnsemblFungi:SPBC12C2.10c.1 GeneID:2540018
KEGG:spo:SPBC12C2.10c eggNOG:COG5602 KO:K11644 OMA:NDEWASH
OrthoDB:EOG4X3M8D NextBio:20801161 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 Uniprot:Q09750
Length = 1522
Score = 376 (137.4 bits), Expect = 2.2e-69, Sum P(7) = 2.2e-69
Identities = 109/397 (27%), Positives = 189/397 (47%)
Query: 490 LDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSV-TSGSEDYSFKHMRRNQ 548
+DL+ C+ C PSYRLLP + S R +L +LND WVS T SED F R+NQ
Sbjct: 588 VDLTQCKSCGPSYRLLPKIELLLPCSGRDDLCWTILNDAWVSFPTLASEDSGFIAHRKNQ 647
Query: 549 YEESLFRCEDDRFELDMLLES----VSSTAKRAEELLNSINENKITLETPFHLKDHFSAL 604
+EE+L + E++R+E D + + + A+++L K P +L ++
Sbjct: 648 FEENLHKLEEERYEYDRHIGANMRFIELLQIHADKMLKMSEVEKANWTLPSNLGGKSVSI 707
Query: 605 NLRCIERLYG-DHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAK 663
+ I+++YG +H +++ L+KNP++ +P++L RLK+K EW ++ +N++W +I K
Sbjct: 708 YHKVIKKVYGKEHAQQIIENLQKNPSVTIPIVLERLKKKDREWRSLQNHWNELWHDIEEK 767
Query: 664 NHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVIPHLE 723
N Y+SLDH+ FK D K+ + K L++E++ + ++ E ++ G P L
Sbjct: 768 NFYRSLDHQGVSFKSVDKKSTTPKFLISELRNLAQQQKVE------LSEGKVTPSHQFL- 820
Query: 724 YGYSDSNIHEDLYKLVQ-YSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPSRPSDVEGAED 782
+ Y D NI D+ +L + + + K +FL VP S +
Sbjct: 821 FSYKDPNIITDIARLFGVFLIHGSTHSAEDNEKMSNFLRSFLSLFFDVPY-DSFIPYLPT 879
Query: 783 AGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPI--SSGNGDENTSTELNNLCRTALSN 840
S ++ +SS++E + S PI ++ NG L R A N
Sbjct: 880 HFNEEESDIDSLSSSLIEKPRA--------SSSPIHHANNNGLRLLKDVLKKTYRGAREN 931
Query: 841 GDTITKENVLDSDRVYRDDLSCSALQLEKEQKNVDIS 877
++ KE+ + D S + + ++N D S
Sbjct: 932 RSSV-KEDYVSESTERTPDASEIDEHISEHEENDDES 967
Score = 193 (73.0 bits), Expect = 2.2e-69, Sum P(7) = 2.2e-69
Identities = 39/76 (51%), Positives = 52/76 (68%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
++L +DAL+YL VK F + E Y+ FL++MK+FK+Q +T VI RV LF G+ NL
Sbjct: 178 RQLNVTDALSYLDLVKLQFHQEPEIYNEFLDIMKEFKSQAIETPEVITRVSKLFAGYPNL 237
Query: 134 IFGFNTFLPKGYEITL 149
I GFNTFLP GY I +
Sbjct: 238 IQGFNTFLPPGYSIEI 253
Score = 183 (69.5 bits), Expect = 2.2e-69, Sum P(7) = 2.2e-69
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 153 EAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFE 212
+A K+ + ++AI FVN +K RF + Y SFL+IL Y+ + + I VY +V+ LF
Sbjct: 340 DASVKQAADLDQAINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLVYFQVSQLFA 399
Query: 213 DHADLLEEFTRFLPDTSATS 232
+ DLLEEF RFLPD S +
Sbjct: 400 EAPDLLEEFKRFLPDVSVNA 419
Score = 140 (54.3 bits), Expect = 2.2e-69, Sum P(7) = 2.2e-69
Identities = 62/255 (24%), Positives = 105/255 (41%)
Query: 1152 LHQTLYERIQWAKMNTTGAEMK--RRTSKEA-----SCSDLYARFMTALYNLLDGSIDNA 1204
L Q Y + K N E+ R S+ + +Y + + L++G ID
Sbjct: 1030 LEQMAYSKQHDVKSNPVAVELGLVRHPSERLGFALPTADTVYEQAIQLCERLMEGEIDQN 1089
Query: 1205 KFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESRKPGKQID 1264
FED R + G ++ L+T++KL+ + KQL +V + ++ YE + ++
Sbjct: 1090 GFEDALRCLYGIHAFRLYTVEKLVTSIIKQLHSVTTNRRLAQVFMYYEKDRVQRRTSPRQ 1149
Query: 1265 SVYY--ENARVLLHEENIYRIQLSSSPSRLSIQLMDNVIEKPEAFAVTMDPNFAAYLLND 1322
+ Y + +EN+ I +S + +I+LM E + D Y +
Sbjct: 1150 QIMYRIQTETAFGPDENLCCIDWNSQTRQSAIRLMGR--EDLTMGTLKSDAEKWCYYIGS 1207
Query: 1323 FL--SAFLGKKEPHAVV--LRRNKRRFEGL--DELSAACMAMEGVQ---LVNGLECRIAC 1373
++ S G H + LR+ EG DE S+ + + L +GL I
Sbjct: 1208 YIMSSPTEGILPEHVRIPFLRKCLPSDEGNEDDESSSVVKSANAIITSFLESGLALTIPI 1267
Query: 1374 NSYKITYVLDTEDVF 1388
N+ KI Y TEDVF
Sbjct: 1268 NTVKIRYENGTEDVF 1282
Score = 119 (46.9 bits), Expect = 5.9e-48, Sum P(5) = 5.9e-48
Identities = 22/86 (25%), Positives = 49/86 (56%)
Query: 155 PPK--KTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFE 212
PP+ + + +A+++++ +K +FH + +Y FL+I+ ++ + + EV + V+ LF
Sbjct: 173 PPQEYRQLNVTDALSYLDLVKLQFHQEPEIYNEFLDIMKEFKSQAIETPEVITRVSKLFA 232
Query: 213 DHADLLEEFTRFLPDTSATSLSHNIP 238
+ +L++ F FLP + +S P
Sbjct: 233 GYPNLIQGFNTFLPPGYSIEISSADP 258
Score = 93 (37.8 bits), Expect = 8.4e-45, Sum P(6) = 8.4e-45
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
Q A+ ++ VK+ F + E Y+ FL+++K ++ + V +V LF +L
Sbjct: 345 QAADLDQAINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLVYFQVSQLFAEAPDL 404
Query: 134 IFGFNTFLPKGYEITLDED-EAPPKKTVEFEEAITFVNK 171
+ F FLP +++++ E K TV +E+ T K
Sbjct: 405 LEEFKRFLP---DVSVNAPAETQDKSTVVPQESATATPK 440
Score = 61 (26.5 bits), Expect = 2.2e-69, Sum P(7) = 2.2e-69
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1129 TSVEERKDCRVFYGNDDFYVLFRLHQTLYERIQWAK 1164
T + +R +F GN Y FRL TLY R++ K
Sbjct: 994 TKLSDRSVYNLF-GNMSLYCFFRLFHTLYSRLEEIK 1028
Score = 52 (23.4 bits), Expect = 2.2e-69, Sum P(7) = 2.2e-69
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 372 FCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMD 421
F + ++ L ++ Y F+K L +YS + +N L G LM+
Sbjct: 517 FLEHARQYLANESKYNEFIKLLELYSQEVFDKNALVERCYVFFGSNEHLMN 567
Score = 52 (23.4 bits), Expect = 1.5e-23, Sum P(5) = 1.5e-23
Identities = 18/82 (21%), Positives = 31/82 (37%)
Query: 767 MLSVPSRPSDVEGAEDAGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGD-EN 825
M V SDVE D K+ S+ S P S + + + D E+
Sbjct: 1435 MSPVAKHASDVEDDHDVAKSTAPDFETSSHRPERSSEKKSPSPVFTSVKQTAENDADNED 1494
Query: 826 TSTELNNLCRTALSNGDTITKE 847
T++++ L +T+ +E
Sbjct: 1495 DKTDMDDQTEETLDADNTMEEE 1516
Score = 50 (22.7 bits), Expect = 2.3e-55, Sum P(5) = 2.3e-55
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 355 SYDDKDA-LKSI--YNQGFIFCDKVKEKLCS--DDYQAFLKCLHIYSNGIIKRNDLQNLV 409
SY DA +K +Q F + VK + + Y +FL L Y + + V
Sbjct: 335 SYPPVDASVKQAADLDQAINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLVYFQV 394
Query: 410 TDLLGKYMDLMDEFNHF 426
+ L + DL++EF F
Sbjct: 395 SQLFAEAPDLLEEFKRF 411
Score = 50 (22.7 bits), Expect = 2.5e-23, Sum P(5) = 2.5e-23
Identities = 22/82 (26%), Positives = 34/82 (41%)
Query: 773 RPSDVEGAEDAGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTELNN 832
R S+ G E GK + N S + G P P VN + ++ GN T L
Sbjct: 1348 RFSENAGVESIGKKGKNLLNESGNGKKLDKGLP-PK--VNGKSSVTRGN-----KTNLK- 1398
Query: 833 LCRTALSNGDTITKENVLDSDR 854
R +N D+ K N+ + ++
Sbjct: 1399 -ARNGRNNDDSSNKINLSEKEK 1419
Score = 43 (20.2 bits), Expect = 1.1e-32, Sum P(7) = 1.1e-32
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 602 SALNLRCIERLYG--DHGLD-VMDILRKNPAIALPVMLTRLKQKQEEWTKCRS 651
+AL RC +G +H ++ + D+++ NPA +PV R+ + T+C+S
Sbjct: 549 NALVERCYV-FFGSNEHLMNWLKDLVKYNPANPIPVPRPRV-----DLTQCKS 595
Score = 40 (19.1 bits), Expect = 3.6e-39, Sum P(4) = 3.6e-39
Identities = 9/53 (16%), Positives = 27/53 (50%)
Query: 82 LTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLI 134
L +L+ + ++ KY+ F+++++ + + D ++ R F + +L+
Sbjct: 515 LEFLEHARQYLANE-SKYNEFIKLLELYSQEVFDKNALVERCYVFFGSNEHLM 566
Score = 40 (19.1 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 250 RSAGIPPLRQMQMDKHRRRDRIATSHADRDLSVDRPEMDDEK 291
R + P+ + D D ++ D + S RPE EK
Sbjct: 1431 REGSMSPVAKHASDVEDDHDVAKSTAPDFETSSHRPERSSEK 1472
Score = 40 (19.1 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 11/50 (22%), Positives = 20/50 (40%)
Query: 207 VASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQRGNERSAGIPP 256
+ SLF + + RF + S+ + N + G + G+PP
Sbjct: 1332 IESLFNESTLRSGKAERFSENAGVESIGKKGKNLLNESGNGKKLDKGLPP 1381
Score = 39 (18.8 bits), Expect = 2.6e-39, Sum P(6) = 2.6e-39
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 142 PKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFL 187
P+ Y LD + + +E E IT V+K+ + N + +FL
Sbjct: 200 PEIYNEFLDIMKEFKSQAIETPEVITRVSKLFAGYPNLIQGFNTFL 245
Score = 38 (18.4 bits), Expect = 2.2e-69, Sum P(7) = 2.2e-69
Identities = 13/52 (25%), Positives = 20/52 (38%)
Query: 226 PDTSATSLSHNIPFVRNSTQRGNERSAGIPPLRQMQMDKHRRRDRIATSHAD 277
P ++ + P Q E+ G P + Q H +R R ATS +
Sbjct: 447 PTSALPPIGKFAPPTTAKAQPAPEKRRGEPAV---QTRNHSKRTRTATSSVE 495
Score = 38 (18.4 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 33/156 (21%), Positives = 61/156 (39%)
Query: 136 GFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRK 195
G N G LD+ PPK V + ++T NK + N + S +I N+ K
Sbjct: 1362 GKNLLNESGNGKKLDKG-LPPK--VNGKSSVTRGNKTNLKARNGRNNDDSSNKI-NLSEK 1417
Query: 196 EHKDINEVYSEVASLFEDHADLLEEFTRFLPDTS-ATSLSHNIPFVRNSTQRGNERSAGI 254
E K+ + E + + + + + D A S + + + +R +E+ +
Sbjct: 1418 E-KEKESIEDEEKNREGSMSPVAKHASDVEDDHDVAKSTAPDFETSSHRPERSSEKKSPS 1476
Query: 255 PPLRQMQMDKHRRRDRIATSHADRDLSVDRPEMDDE 290
P ++ T+ D D D+ +MDD+
Sbjct: 1477 PVFTSVKQ----------TAENDADNEDDKTDMDDQ 1502
Score = 37 (18.1 bits), Expect = 1.4e-33, Sum P(7) = 1.4e-33
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 979 KIEKEEGELSPNGDF 993
K+E EG+++P+ F
Sbjct: 805 KVELSEGKVTPSHQF 819
>ASPGD|ASPL0000051511 [details] [associations]
symbol:AN1546 species:162425 "Emericella nidulans"
[GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0033698 "Rpd3L complex"
evidence=IEA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0061188 "negative regulation of
chromatin silencing at rDNA" evidence=IEA] [GO:0031939 "negative
regulation of chromatin silencing at telomere" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0051038 "negative regulation of transcription
during meiosis" evidence=IEA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 GO:GO:0005634 GO:GO:0006355 EMBL:BN001307
EMBL:AACD01000025 Gene3D:1.20.1160.11 SUPFAM:SSF47762
eggNOG:COG5602 KO:K11644 OMA:NDEWASH OrthoDB:EOG4X3M8D
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 RefSeq:XP_659150.1
ProteinModelPortal:Q5BD34 SMR:Q5BD34 STRING:Q5BD34
EnsemblFungi:CADANIAT00008174 GeneID:2874883 KEGG:ani:AN1546.2
HOGENOM:HOG000158405 Uniprot:Q5BD34
Length = 1605
Score = 320 (117.7 bits), Expect = 9.5e-61, Sum P(5) = 9.5e-61
Identities = 90/299 (30%), Positives = 149/299 (49%)
Query: 411 DLLGKYMDLMDEFNHFFERCE--NIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKRE 468
D + KY+ F+ F + C + D V+ K++ G++ + ++ KR
Sbjct: 748 DRVKKYIGNKQTFSEFLKLCNLYSTDLIDRHVLVKRAA---GYIGSNPELM---AWFKRF 801
Query: 469 MEVTKEKDRYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDH 528
M V + +D+ E + ++LS+C+ PSYRLLP S R EL VLND
Sbjct: 802 MHVEEPEDKIVEVKPKQEPGIVNLSHCRSLGPSYRLLPKRERQKPCSGRDELCRSVLNDE 861
Query: 529 WVS-VTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSI--- 584
W S T SED F R+NQYE++L R E+DR + D +E+ + T + E ++
Sbjct: 862 WASHPTWASEDSGFVAHRKNQYEDALHRIEEDRHDYDHHIEACNRTIQLIEPIVQQFLVM 921
Query: 585 -NENKITLETPFHLKDHFSALNLRCIERLYG-DHGLDVMDILRKNPAIALPVMLTRLKQK 642
+ + P L A+ R I+++Y G ++ + + P LP++L RLKQK
Sbjct: 922 TEAERAAFQLPRGLGGQSEAIYQRVIKKIYDRQRGERIIKEMFERPCHVLPIVLFRLKQK 981
Query: 643 QEEWTKCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIK-QFKENK 700
EEW + +++K+W E K +++SLDH++ K D K K + EI+ + +E+K
Sbjct: 982 CEEWKASQREWDKIWREQMQKAYWRSLDHQAIASKGVDKKLFVAKHIQTEIQAKHEESK 1040
Score = 217 (81.4 bits), Expect = 9.5e-61, Sum P(5) = 9.5e-61
Identities = 43/76 (56%), Positives = 53/76 (69%)
Query: 80 DALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNT 139
DAL+YL +VK F DQ + Y+ FL++MKDFK+Q DT GVI RV +LF GH LI GFNT
Sbjct: 277 DALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSNLFNGHPALIQGFNT 336
Query: 140 FLPKGYEITLDEDEAP 155
FLP GY I ++ P
Sbjct: 337 FLPPGYRIECGTEDNP 352
Score = 198 (74.8 bits), Expect = 9.5e-61, Sum P(5) = 9.5e-61
Identities = 40/83 (48%), Positives = 56/83 (67%)
Query: 149 LDEDEAPPKK-TVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEV 207
L +A K+ VEF AI++VNKIK RF + +YK FLEIL Y++E K I +VY++V
Sbjct: 516 LQGSQADLKRGPVEFNHAISYVNKIKNRFSSRPEIYKQFLEILQTYQRESKPIGDVYTQV 575
Query: 208 ASLFEDHADLLEEFTRFLPDTSA 230
LF DLLE+F +FLP+++A
Sbjct: 576 TQLFNSAPDLLEDFKQFLPESAA 598
Score = 109 (43.4 bits), Expect = 2.4e-37, Sum P(5) = 2.4e-37
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 163 EEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFT 222
++A+++++++K RF + VY FL+I+ ++ + D V V++LF H L++ F
Sbjct: 276 QDALSYLDQVKVRFVDQPDVYNRFLDIMKDFKSQAIDTPGVIQRVSNLFNGHPALIQGFN 335
Query: 223 RFLP 226
FLP
Sbjct: 336 TFLP 339
Score = 96 (38.9 bits), Expect = 1.1e-32, Sum P(4) = 1.1e-32
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 81 ALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTF 140
A++Y+ ++K+ F + E Y FLE+++ ++ + V +V LF +L+ F F
Sbjct: 533 AISYVNKIKNRFSSRPEIYKQFLEILQTYQRESKPIGDVYTQVTQLFNSAPDLLEDFKQF 592
Query: 141 LPK 143
LP+
Sbjct: 593 LPE 595
Score = 90 (36.7 bits), Expect = 9.5e-61, Sum P(5) = 9.5e-61
Identities = 45/216 (20%), Positives = 87/216 (40%)
Query: 1183 SDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVA-AD 1241
++LY + + ++ G ++++ E+ R Y L+ L+K+ + K + D
Sbjct: 1297 ANLYQQVVRMCEEVIKGDLESSHLEETLRRYYLRSGYQLYNLEKMFTGIAKFAGAIFNGD 1356
Query: 1242 EMDNK--LIQLYEYEESRKPGKQIDSVYY-ENARVLLHEENIYRIQLSSSPSRLSIQLM- 1297
D +I L+ E + + Y + L+ + I+RI + ++QL+
Sbjct: 1357 SKDRSSDIINLFFKERDKDETTHNQEIQYRKQVERLVKDSEIFRITYYPDNQKTTVQLLT 1416
Query: 1298 --DNVIEKPEAFAVTMDPNF-AAYLLNDFLSAFLGKKEPHAVVLRRN-KRRFEGLDELSA 1353
D +E E + +AY + D + + L+RN + E +E +
Sbjct: 1417 PEDATLENEELSQEARWSYYVSAYTMRDPTEG-VPFSQMRMPFLKRNLPGKLEQEEEYNR 1475
Query: 1354 ACMAMEGVQLVNGLECRIACNSYKITYVLDTEDVFY 1389
+ V +GL RI NSY I Y + D +Y
Sbjct: 1476 FYRPL--VHQ-DGLIIRICANSYHILYEPGSYDWWY 1508
Score = 78 (32.5 bits), Expect = 2.2e-48, Sum P(5) = 2.2e-48
Identities = 22/94 (23%), Positives = 38/94 (40%)
Query: 335 PDKKKSIKKVEGFGANSSLASYDDKDALKSIYNQGFIFCDKVKEKLCS--DDYQAFLKCL 392
P + + + G G+ S D +N + +K+K + S + Y+ FL+ L
Sbjct: 499 PSMTQPMNNLAGVGSGVLQGSQADLKRGPVEFNHAISYVNKIKNRFSSRPEIYKQFLEIL 558
Query: 393 HIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
Y D+ VT L DL+++F F
Sbjct: 559 QTYQRESKPIGDVYTQVTQLFNSAPDLLEDFKQF 592
Score = 73 (30.8 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 149 LDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVA 208
L E P +E F +++KK N + + FL++ N+Y + D + + A
Sbjct: 727 LPEPVQPTFSLTPTQEEFAFFDRVKKYIGNKQ-TFSEFLKLCNLYSTDLIDRHVLVKRAA 785
Query: 209 SLFEDHADLLEEFTRFL 225
+ +L+ F RF+
Sbjct: 786 GYIGSNPELMAWFKRFM 802
Score = 71 (30.1 bits), Expect = 1.1e-34, Sum P(5) = 1.1e-34
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 370 FIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
F F D+VK+ + + + FLK ++YS +I R+ L +G +LM F F
Sbjct: 744 FAFFDRVKKYIGNKQTFSEFLKLCNLYSTDLIDRHVLVKRAAGYIGSNPELMAWFKRF 801
Score = 52 (23.4 bits), Expect = 9.5e-61, Sum P(5) = 9.5e-61
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 1135 KDCRVFYGNDDFYVLFRLHQTLYERIQWAKMNTTGA-EMKRR 1175
K Y N + Y FR + LY R+ K++ A E+ RR
Sbjct: 1228 KKAHHLYANLNIYCFFRTFEILYSRLLRIKLHEKEAHEVVRR 1269
Score = 44 (20.5 bits), Expect = 1.5e-55, Sum P(4) = 1.5e-55
Identities = 12/60 (20%), Positives = 31/60 (51%)
Query: 749 TKDQLNKAMKLWTTFLEPMLSVPSRPSDVEGAEDAGKARHSGKNNSASSMVESDGSPGPD 808
+KDQ++++ + + ++++ S + E + AG A +N M +++ + GP+
Sbjct: 1550 SKDQVDESNQRFRSWIKG-----SEAENAETSAPAGSATDKPENKDDVEMPDAEKASGPE 1604
Score = 43 (20.2 bits), Expect = 8.1e-32, Sum P(5) = 8.1e-32
Identities = 35/138 (25%), Positives = 61/138 (44%)
Query: 628 PAIALPVMLT-RLKQKQEEWT---KCRSDF-NKVWAEIYAK--NHYKS-LDHRSFYFKQQ 679
PA+ PV T L QEE+ + + NK + K N Y + L R K+
Sbjct: 725 PALPEPVQPTFSLTPTQEEFAFFDRVKKYIGNKQTFSEFLKLCNLYSTDLIDRHVLVKRA 784
Query: 680 DSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVIPHLEYGYSDSNIHEDLYKLV 739
S L+A K+F ++ ED ++ V ++P I +L + S + L K
Sbjct: 785 AGYIGSNPELMAWFKRFMHVEEPEDKIVEV--KPKQEPGIVNLSHCRSLGPSYRLLPKRE 842
Query: 740 QYSCEEMCSTKDQLNKAM 757
+ ++ CS +D+L +++
Sbjct: 843 R---QKPCSGRDELCRSV 857
Score = 40 (19.1 bits), Expect = 4.0e-55, Sum P(4) = 4.0e-55
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 1236 QTVAADEMDNKLIQLYEYEESRKPGKQIDSVYYENARVLLHEENIYRIQLS-SSPSRL-- 1292
Q +A+ +D KL + ++ ++ K +S +N R + ++ + S + P+ L
Sbjct: 1011 QAIASKGVDKKLF-VAKHIQTEIQAKHEES---KNLRKSGFQVPKHQFEFSFTDPTVLID 1066
Query: 1293 SIQLMDNVIEKPEAFAVTMDPNFAAYLLNDFLSAFLGKKEP--HAVV--LRRNKRRF-EG 1347
+ L+ I++ A DP + DF+ F G H + L EG
Sbjct: 1067 ATHLLLTFIDRNSA-GFGADPQKVMMFIKDFIPVFFGMDRDTFHVYMNELSNGTSPIDEG 1125
Query: 1348 LDELSAA 1354
DE SAA
Sbjct: 1126 DDESSAA 1132
Score = 40 (19.1 bits), Expect = 2.5e-30, Sum P(5) = 2.5e-30
Identities = 11/60 (18%), Positives = 28/60 (46%)
Query: 232 SLSHNIPFVRNSTQRGNERSAGIPPLRQMQMDKHRRRDRIATSHADRDLSVDRPEMDDEK 291
++ H P N + + R I ++ + HR R+R +R+ ++R +++ ++
Sbjct: 108 AMQHPSPQSMNQDRERDSRDREIIERQRQEEMVHRERER------ERERDIERQQLERQR 161
>POMBASE|SPBC1734.16c [details] [associations]
symbol:pst3 "SIN3 family co-repressor Pst3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=NAS] [GO:0006342 "chromatin silencing"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IC] [GO:0016575 "histone deacetylation"
evidence=IC] [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IDA] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 PomBase:SPBC1734.16c GO:GO:0005829
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0006342
GO:GO:0070210 GO:GO:0006303 GO:GO:0016575 GO:GO:0032221
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 PIR:T39663
RefSeq:NP_595433.1 ProteinModelPortal:O74755 SMR:O74755
STRING:O74755 EnsemblFungi:SPBC1734.16c.1 GeneID:2539793
KEGG:spo:SPBC1734.16c OMA:NILNICE OrthoDB:EOG4NGKXP
NextBio:20800942 Uniprot:O74755
Length = 1154
Score = 224 (83.9 bits), Expect = 1.3e-50, Sum P(5) = 1.3e-50
Identities = 59/208 (28%), Positives = 101/208 (48%)
Query: 501 SYRLLPDDYPIPSASQRSELGAQVLNDHWVSVT-SGSEDYSFKHMRRNQYEESLFRCEDD 559
+YR LPD + S R +L VLND ++SV S + H NQY ++L ED+
Sbjct: 499 TYRKLPDSWKQDKCSGRDDLDNSVLNDDYISVAPKPSHVKNIMH-HENQYLQALQLVEDE 557
Query: 560 RFELDMLLESVSSTAKRAEELLN-SINENKITLETPFHLKDHFSALNLRCIERLYG-DHG 617
R++ D +L + S K +I+E+ LET + + + +YG +H
Sbjct: 558 RYDYDRVLNTTESAIKILANFCEPTIHEH---LETALQELERSKRIIKNALIIVYGKEHA 614
Query: 618 LDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNHYKSLDHRSFYFK 677
+D L K A PV+L R+K K +EW + + +++K+W +I KN + D R +
Sbjct: 615 NLALDTLFKKLPTAAPVLLKRIKTKDQEWRRSKREWSKIWRQIEKKNAQAAFDDRYCRIE 674
Query: 678 QQDSKNLSTKSLVAEIKQFKENKQTEDD 705
+D + LS ++ +I + ++ D
Sbjct: 675 GRDRRGLSYSRILRDIDDIYQRQKHRID 702
Score = 220 (82.5 bits), Expect = 1.3e-50, Sum P(5) = 1.3e-50
Identities = 43/83 (51%), Positives = 60/83 (72%)
Query: 72 TSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHN 131
+++ L +DAL+YL+ VK F ++RE Y+ FLE+M+DFK+Q DT GVI RV +LF G+
Sbjct: 109 SNRPLDVNDALSYLELVKYYFSERREIYNRFLEIMRDFKSQALDTLGVINRVSELFNGYP 168
Query: 132 NLIFGFNTFLPKGYEITLDEDEA 154
LI GFNTFLP GY+I + D +
Sbjct: 169 QLIEGFNTFLPSGYKIEVQLDSS 191
Score = 175 (66.7 bits), Expect = 1.3e-50, Sum P(5) = 1.3e-50
Identities = 45/124 (36%), Positives = 67/124 (54%)
Query: 147 ITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSE 206
++ E+E P V+F AI ++NK+K R+ + Y FL +L Y+K K I EV +
Sbjct: 244 VSSTENEKP---RVDFNYAIAYMNKVKARYPPNSDTYMEFLGVLRTYQKAQKSIFEVRAR 300
Query: 207 VASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQR----GNERSAGIPPLRQMQM 262
VA +F+D DLLEEF FLPD + S + P V+ S R GN +PP ++
Sbjct: 301 VAEIFKDSPDLLEEFKLFLPD-NVDSTEPSTPNVQKSPNRLPPVGN---FSLPPSAPVRE 356
Query: 263 DKHR 266
++R
Sbjct: 357 KRNR 360
Score = 107 (42.7 bits), Expect = 1.3e-50, Sum P(5) = 1.3e-50
Identities = 35/158 (22%), Positives = 66/158 (41%)
Query: 1140 FYGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDG 1199
F+GN YVLFRL Y R++ K+ + + AS + Y + L G
Sbjct: 846 FFGNATMYVLFRLICVCYSRLEHIKLFVESSTIY------ASSTGGYENILNICEKYLKG 899
Query: 1200 SIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESRKP 1259
S +F + Y++ ++++LL + ++ + D +L+ L+E + +
Sbjct: 900 SCSRLEFRKYLQKFNNETCYMICSIERLLKVIFYRIHEILLDPKLGQLLLLFESDGANSV 959
Query: 1260 GKQIDSVYYEN--ARVLLHEENIYRIQLSSSPSRLSIQ 1295
+ + Y N +L E I+ ++ RL IQ
Sbjct: 960 TTPREQMVYRNHVESILAPESKIFNMRWYPLEKRLCIQ 997
Score = 104 (41.7 bits), Expect = 2.9e-27, Sum P(4) = 2.9e-27
Identities = 30/133 (22%), Positives = 54/133 (40%)
Query: 158 KTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADL 217
+ ++ +A++++ +K F +Y FLEI+ ++ + D V + V+ LF + L
Sbjct: 111 RPLDVNDALSYLELVKYYFSERREIYNRFLEIMRDFKSQALDTLGVINRVSELFNGYPQL 170
Query: 218 LEEFTRFLPDTSATSL---SHNIPFVRNSTQRGNERSAGIPPLRQMQMDKHRRRDRIATS 274
+E F FLP + S N VR T G+ + +R +TS
Sbjct: 171 IEGFNTFLPSGYKIEVQLDSSNTSVVRVGTPMHPLPQQGVQSTLPVAPSNEDQRTMESTS 230
Query: 275 HADRDLSVDRPEM 287
D P +
Sbjct: 231 PTDSQPQPSAPNL 243
Score = 88 (36.0 bits), Expect = 6.5e-25, Sum P(4) = 6.5e-25
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 81 ALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTF 140
A+ Y+ +VK + + Y FL V++ ++ + V ARV ++FK +L+ F F
Sbjct: 259 AIAYMNKVKARYPPNSDTYMEFLGVLRTYQKAQKSIFEVRARVAEIFKDSPDLLEEFKLF 318
Query: 141 LPKGYEIT 148
LP + T
Sbjct: 319 LPDNVDST 326
Score = 67 (28.6 bits), Expect = 3.5e-39, Sum P(4) = 3.5e-39
Identities = 21/85 (24%), Positives = 38/85 (44%)
Query: 352 SLASYDDKDALKSIYNQGFIFCDKVKEKLC--SDDYQAFLKCLHIYSNGIIKRNDLQNLV 409
+L S + + + +N + +KVK + SD Y FL L Y +++ V
Sbjct: 242 NLVSSTENEKPRVDFNYAIAYMNKVKARYPPNSDTYMEFLGVLRTYQKAQKSIFEVRARV 301
Query: 410 TDLLGKYMDLMDEFNHFFERCENID 434
++ DL++EF F +N+D
Sbjct: 302 AEIFKDSPDLLEEFKLFLP--DNVD 324
Score = 60 (26.2 bits), Expect = 1.9e-38, Sum P(4) = 1.9e-38
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 163 EEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFE-DHADL-LEE 220
EE + F I++ D + FLE+L++YR++ D E+ + + L D+ L E
Sbjct: 410 EELLAFTT-IRQHLP-DTLAFHKFLELLHLYREKLLDKTELLNSFSKLVRNDNLTLWFSE 467
Query: 221 FTRF 224
F R+
Sbjct: 468 FIRW 471
Score = 57 (25.1 bits), Expect = 2.3e-20, Sum P(3) = 2.3e-20
Identities = 21/91 (23%), Positives = 40/91 (43%)
Query: 336 DKKKSIKKVEGFGANSSLASYDDKDALKSIYNQGFIFCDKVKEKLCSDDYQAFLKCLHIY 395
D S + EG ++S+ D DAL + + F ++ + Y FL+ + +
Sbjct: 94 DGSISSQNAEGLSSSSN-RPLDVNDALSYLELVKYYFSER------REIYNRFLEIMRDF 146
Query: 396 SNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+ + + N V++L Y L++ FN F
Sbjct: 147 KSQALDTLGVINRVSELFNGYPQLIEGFNTF 177
Score = 49 (22.3 bits), Expect = 1.3e-50, Sum P(5) = 1.3e-50
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 385 YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFERCEN 432
+ FL+ LH+Y ++ + +L N + L+ + +L F+ F +N
Sbjct: 428 FHKFLELLHLYREKLLDKTELLNSFSKLV-RNDNLTLWFSEFIRWSDN 474
Score = 40 (19.1 bits), Expect = 3.4e-18, Sum P(3) = 3.4e-18
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 792 NNSASSMVESDGSPGPDGTVNSRQPISSGNGDENT 826
+N++ V + P P V S P++ N D+ T
Sbjct: 191 SNTSVVRVGTPMHPLPQQGVQSTLPVAPSNEDQRT 225
Score = 40 (19.1 bits), Expect = 3.4e-18, Sum P(3) = 3.4e-18
Identities = 15/78 (19%), Positives = 31/78 (39%)
Query: 168 FVNKIKKRFH--NDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFL 225
+++ K H N H +L+ L + E D + V + S + A+ E
Sbjct: 527 YISVAPKPSHVKNIMHHENQYLQALQLVEDERYDYDRVLNTTESAIKILANFCEPTIHEH 586
Query: 226 PDTSATSLSHNIPFVRNS 243
+T+ L + ++N+
Sbjct: 587 LETALQELERSKRIIKNA 604
Score = 39 (18.8 bits), Expect = 2.7e-25, Sum P(4) = 2.7e-25
Identities = 15/73 (20%), Positives = 33/73 (45%)
Query: 1233 KQLQTVAADEMDNKLIQLYEYEESRKPGKQIDSVYYENA---RVLLHEENIYRIQLSSSP 1289
KQ + D++DN ++ + KP + +++EN + L E+ Y +
Sbjct: 508 KQDKCSGRDDLDNSVLNDDYISVAPKPSHVKNIMHHENQYLQALQLVEDERYDYDRVLNT 567
Query: 1290 SRLSIQLMDNVIE 1302
+ +I+++ N E
Sbjct: 568 TESAIKILANFCE 580
Score = 38 (18.4 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 394 IYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFERCENIDGFL 437
IY+ + D ++ D LG + + FN + + E + FL
Sbjct: 135 IYNRFLEIMRDFKSQALDTLGVINRVSELFNGYPQLIEGFNTFL 178
>POMBASE|SPAC23C11.15 [details] [associations]
symbol:pst2 "Clr6 histone deacetylase complex subunit
Pst2" species:4896 "Schizosaccharomyces pombe" [GO:0003714
"transcription corepressor activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IC] [GO:0006342
"chromatin silencing" evidence=ISO] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IMP] [GO:0032221 "Rpd3S complex" evidence=IDA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
PomBase:SPAC23C11.15 GO:GO:0003714 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006351 GO:GO:0006338 GO:GO:0006342
GO:GO:0030261 GO:GO:0016575 GO:GO:0032221 Gene3D:1.20.1160.11
SUPFAM:SSF47762 eggNOG:COG5602 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 PIR:T38253 RefSeq:NP_593646.1
ProteinModelPortal:O13919 DIP:DIP-29341N IntAct:O13919
STRING:O13919 EnsemblFungi:SPAC23C11.15.1 GeneID:2541624
KEGG:spo:SPAC23C11.15 OMA:WITTANT OrthoDB:EOG454D8N
NextBio:20802717 Uniprot:O13919
Length = 1075
Score = 316 (116.3 bits), Expect = 2.6e-46, Sum P(7) = 2.6e-46
Identities = 75/215 (34%), Positives = 116/215 (53%)
Query: 486 SIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVS-VTSGSEDYSFKHM 544
S+ S+ C PSYRLLP + S S R + +LND WVS T SE+ F
Sbjct: 325 SVYNSACSDFPECGPSYRLLPVEERNISCSGRDDFAWGILNDDWVSHPTWASEESGFIVQ 384
Query: 545 RRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINE------NKITLETPFHLK 598
R+ YEE++ + E++R+E D +E+ S T K +++ N INE TLE L
Sbjct: 385 RKTPYEEAMTKLEEERYEFDRHIEATSWTIKSLKKIQNRINELPEEERETYTLEEGLGLP 444
Query: 599 DHFSALNLRCIERLY-GDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVW 657
++ + I+ +Y +H ++ L + P + LP++++RL++K EEW + W
Sbjct: 445 S--KSIYKKTIKLVYTSEHAEEMFKALERMPCLTLPLVISRLEEKNEEWKSVKRSLQPGW 502
Query: 658 AEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAE 692
I KN+ KSLD + YFK +D KN+S+K L+AE
Sbjct: 503 RSIEFKNYDKSLDSQCVYFKARDKKNVSSKFLLAE 537
Score = 167 (63.8 bits), Expect = 2.6e-46, Sum P(7) = 2.6e-46
Identities = 50/210 (23%), Positives = 94/210 (44%)
Query: 1186 YARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDN 1245
Y + L+ G +D + FED R GN++Y ++T+DKL++ KQ+ + +D
Sbjct: 809 YENTYVMILRLIYGIVDQSAFEDYLRFYYGNKAYKIYTIDKLVWSAAKQVHHIVSDGKYK 868
Query: 1246 KLIQLYEYEESRKPGKQIDSVYY--ENARVLLHEENIYRIQLSSSPSRLSIQLMDNVIEK 1303
+ L E S P K D Y E ++L +E ++R + I++M
Sbjct: 869 FVTSLVEQNSSASPKKNYDDFLYRLEIEKLLNPDEILFRFCWINKFKSFGIKIMKRANLI 928
Query: 1304 PEAFAVTMDPNFAAYLLN---DFLSAFLGKKEPHAVVLRRNKRRFEGLDELSAACMA--M 1358
+ T + Y+ N L+ + K L RN + +++L + +
Sbjct: 929 VDQSLDTQRRVWKKYVQNYRIQKLTEEISYKNYRCPFLCRNIEKERTVEQLVSRLQTKLL 988
Query: 1359 EGVQLVNGLECRIACNSYKITYVLDTEDVF 1388
+LV+GL+ ++ +S+K+ Y+ TED +
Sbjct: 989 RSAELVSGLQAKLCLDSFKLLYLPRTEDSY 1018
Score = 88 (36.0 bits), Expect = 1.5e-44, Sum P(6) = 1.5e-44
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 168 FVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPD 227
FV K+ +R + +VY +F++++ E D ++ + D+ DLLE FLP
Sbjct: 42 FVQKLGQRLCHRPYVYSAFMDVVKALHNEIVDFPGFIERISVILRDYPDLLEYLNIFLPS 101
Query: 228 TSATSLSHN 236
+ LS++
Sbjct: 102 SYKYLLSNS 110
Score = 85 (35.0 bits), Expect = 2.6e-46, Sum P(7) = 2.6e-46
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 162 FEEAITFVNKIKKRF-HNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEE 220
+ AI FV+++++ N E +K + L ++ ++E+ + V SL +H L E
Sbjct: 142 YHRAIGFVSRVRRALLSNPEQFFK-LQDSLRKFKNSECSLSELQTIVTSLLAEHPSLAHE 200
Query: 221 FTRFLPDT 228
F FLP +
Sbjct: 201 FHNFLPSS 208
Score = 82 (33.9 bits), Expect = 1.5e-44, Sum P(6) = 1.5e-44
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 353 LASYDDKDALKSIYNQGFIFCDKVKEKLCSDDYQAF-LK-CLHIYSNGIIKRNDLQNLVT 410
+A+Y+D L Y++ F +V+ L S+ Q F L+ L + N ++LQ +VT
Sbjct: 132 VATYND---LPCTYHRAIGFVSRVRRALLSNPEQFFKLQDSLRKFKNSECSLSELQTIVT 188
Query: 411 DLLGKYMDLMDEFNHF 426
LL ++ L EF++F
Sbjct: 189 SLLAEHPSLAHEFHNF 204
Score = 74 (31.1 bits), Expect = 2.6e-46, Sum P(7) = 2.6e-46
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 99 YDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTFLPKGYEITLDEDEA 154
Y F++V+K + D G I R+ + + + +L+ N FLP Y+ L A
Sbjct: 57 YSAFMDVVKALHNEIVDFPGFIERISVILRDYPDLLEYLNIFLPSSYKYLLSNSGA 112
Score = 68 (29.0 bits), Expect = 2.6e-46, Sum P(7) = 2.6e-46
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 357 DDKDALKSIYNQGFIFCDKVKEKLCS-DDYQAFLKCLHIYSNGIIKRNDL 405
D+ + N+ F VK L + Y FLK L++Y GII RN L
Sbjct: 245 DNLSPFSHLSNESSDFFKNVKNVLTDVETYHEFLKLLNLYVQGIIDRNIL 294
Score = 54 (24.1 bits), Expect = 2.6e-46, Sum P(7) = 2.6e-46
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 1141 YGNDDFYVLFRLHQTLYERI 1160
+G YV FRL LYER+
Sbjct: 744 FGYSSMYVFFRLFNLLYERL 763
Score = 54 (24.1 bits), Expect = 5.9e-37, Sum P(5) = 5.9e-37
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 372 FCDKVKEKLCSDDY--QAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
F K+ ++LC Y AF+ + N I+ ++ +L Y DL++ N F
Sbjct: 42 FVQKLGQRLCHRPYVYSAFMDVVKALHNEIVDFPGFIERISVILRDYPDLLEYLNIF 98
Score = 51 (23.0 bits), Expect = 5.5e-40, Sum P(6) = 5.5e-40
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEF 221
E+ F +K D Y FL++LN+Y + D N + S + ++ L F
Sbjct: 256 ESSDFFKNVKNVL-TDVETYHEFLKLLNLYVQGIIDRNILVSRGFGFLKSNSGLWRSF 312
Score = 49 (22.3 bits), Expect = 3.6e-39, Sum P(6) = 3.6e-39
Identities = 13/62 (20%), Positives = 26/62 (41%)
Query: 81 ALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTF 140
A+ ++ V+ E++ + ++ FK + + V L H +L F+ F
Sbjct: 145 AIGFVSRVRRALLSNPEQFFKLQDSLRKFKNSECSLSELQTIVTSLLAEHPSLAHEFHNF 204
Query: 141 LP 142
LP
Sbjct: 205 LP 206
Score = 48 (22.0 bits), Expect = 1.1e-32, Sum P(5) = 1.1e-32
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 1199 GSIDNAKFEDECRAIIGNQS-YVLFTLDKLLYRLCKQLQ 1236
G +N +D + G S YV F L LLY +LQ
Sbjct: 729 GDTENEMHDDVDKEQFGYSSMYVFFRLFNLLYERLYELQ 767
Score = 42 (19.8 bits), Expect = 2.6e-46, Sum P(7) = 2.6e-46
Identities = 20/106 (18%), Positives = 43/106 (40%)
Query: 761 TTFL-EPMLSVPSRPSDVEGAEDAGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPISS 819
T F+ +P ++ A ++ + ++NS +S+ + G+ P QP ++
Sbjct: 648 TEFVKQPKINGQRESRSAAAARKKEESGNKSQSNSQNSLSDESGNVTPVSKKQLSQPAAA 707
Query: 820 GNGDENTSTELNNLCRTALSNGDTITKENVLDSDRVYRDDLSCSAL 865
+ ++L GDT EN + D V ++ S++
Sbjct: 708 IKASLKYPSHPDSLLEHQDHAGDT---ENEMHDD-VDKEQFGYSSM 749
Score = 37 (18.1 bits), Expect = 2.3e-44, Sum P(6) = 2.3e-44
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 723 EYGYSDSNIHEDLYKLVQYSCEEMCSTKDQLN 754
++GYS + L+ L+ E+ +DQ++
Sbjct: 743 QFGYSSMYVFFRLFNLLYERLYELQRLEDQVS 774
>TAIR|locus:2032397 [details] [associations]
symbol:AT1G24200 "AT1G24200" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00528109
RefSeq:NP_173830.1 UniGene:At.51748 ProteinModelPortal:F4I964
SMR:F4I964 EnsemblPlants:AT1G24200.1 GeneID:839034
KEGG:ath:AT1G24200 OMA:VIIRMKE Uniprot:F4I964
Length = 196
Score = 447 (162.4 bits), Expect = 6.7e-41, P = 6.7e-41
Identities = 92/156 (58%), Positives = 109/156 (69%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNN 132
+ K TT+DAL YL+ VK FQ QREKYD FL++M D+K QR D +GVI R+K+L K
Sbjct: 7 AHKPTTNDALKYLRAVKAKFQGQREKYDEFLQIMIDYKTQRIDISGVIIRMKELLKEQQG 66
Query: 133 LIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNM 192
L+ GFN FLP GY IT E + KK VE EAI+F+NKIK RF D+ VYKS L+ILNM
Sbjct: 67 LLLGFNAFLPNGYMITHHEQPSQ-KKPVELGEAISFINKIKTRFQGDDRVYKSVLDILNM 125
Query: 193 YRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDT 228
YRK+ K I VY EVA LF DH +LL EFT FLP T
Sbjct: 126 YRKDRKPITAVYREVAILFLDHNNLLVEFTHFLPAT 161
>TAIR|locus:2020603 [details] [associations]
symbol:AT1G70030 "AT1G70030" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762 HSSP:Q62141
EMBL:BT006143 EMBL:BT008545 EMBL:AK229700 IPI:IPI00521746
RefSeq:NP_177161.2 UniGene:At.35350 ProteinModelPortal:Q84R24
SMR:Q84R24 EnsemblPlants:AT1G70030.1 GeneID:843340
KEGG:ath:AT1G70030 TAIR:At1g70030 InParanoid:Q84R24 OMA:EVAILFQ
PhylomeDB:Q84R24 ProtClustDB:CLSN2682381 ArrayExpress:Q84R24
Genevestigator:Q84R24 Uniprot:Q84R24
Length = 160
Score = 436 (158.5 bits), Expect = 1.0e-39, P = 1.0e-39
Identities = 86/155 (55%), Positives = 111/155 (71%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNN 132
++KLTT+DAL +L VK +QD RE YD FL +MKDF+ QR T VI++VK+LFKG
Sbjct: 4 NKKLTTTDALDFLHLVKTKYQDNREIYDSFLTIMKDFRGQRAKTCDVISKVKELFKGQPE 63
Query: 133 LIFGFNTFLPKGYEITLDEDEAPPK-KTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILN 191
L+ GFNTFLP G+EITL +DE K F+EA FVNK+K RF N++ V+ SFLE+L
Sbjct: 64 LLLGFNTFLPTGFEITLSDDELTSNSKFAHFDEAYEFVNKVKTRFQNND-VFNSFLEVLK 122
Query: 192 MYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLP 226
++KE+K + E+Y EVA LF+ H DLLEEF FLP
Sbjct: 123 THKKENKSVAELYQEVAILFQGHRDLLEEFHLFLP 157
Score = 106 (42.4 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 158 KTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADL 217
K + +A+ F++ +K ++ ++ +Y SFL I+ +R + +V S+V LF+ +L
Sbjct: 5 KKLTTTDALDFLHLVKTKYQDNREIYDSFLTIMKDFRGQRAKTCDVISKVKELFKGQPEL 64
Query: 218 LEEFTRFLPDTSATSLS 234
L F FLP +LS
Sbjct: 65 LLGFNTFLPTGFEITLS 81
Score = 62 (26.9 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 366 YNQGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFN 424
+++ + F +KVK + ++D + +FL+ L + +L V L + DL++EF
Sbjct: 94 FDEAYEFVNKVKTRFQNNDVFNSFLEVLKTHKKENKSVAELYQEVAILFQGHRDLLEEF- 152
Query: 425 HFF 427
H F
Sbjct: 153 HLF 155
>UNIPROTKB|O01319 [details] [associations]
symbol:sin-3 "Protein SIN-3, isoform a" species:6239
"Caenorhabditis elegans" [GO:0016575 "histone deacetylation"
evidence=IDA] InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
GO:GO:0005634 GO:GO:0001708 GO:GO:0016246 GO:GO:0006355
GO:GO:0040011 GO:GO:0006974 GO:GO:0045138 GO:GO:0040025
GO:GO:0040027 GO:GO:0016575 Gene3D:1.20.1160.11 SUPFAM:SSF47762
EMBL:Z81494 KO:K11644 InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 UniGene:Cel.18986 GeneID:172628
KEGG:cel:CELE_F02E9.4 UCSC:F02E9.4b CTD:172628 NextBio:876327
PIR:T20513 RefSeq:NP_492284.2 ProteinModelPortal:O01319 SMR:O01319
STRING:O01319 EnsemblMetazoa:F02E9.4a WormBase:F02E9.4a
ArrayExpress:O01319 Uniprot:O01319
Length = 1505
Score = 237 (88.5 bits), Expect = 1.3e-33, Sum P(5) = 1.3e-33
Identities = 71/316 (22%), Positives = 145/316 (45%)
Query: 460 DKDREHKREMEVTKEKDRYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSE 519
D D ++++ + K +++ + ++ ++ + PSYR + D S R E
Sbjct: 763 DMDAVMRKDLPAIQPKRGLRDQKMLQQVKNVEAATVCTLGPSYRFMKDT-KATDCSGRVE 821
Query: 520 LGAQ---VLNDHWVSVTS-GSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAK 575
L VLND W S+ S SED + ++++ EE F+ ED+R+ELD++++S + +
Sbjct: 822 LDDDLKGVLNDTWTSIPSWSSEDTGSQAIKKSNLEEFHFKTEDERYELDIIVDSNRTVIE 881
Query: 576 RAEELLNSI----NENKITLETPFHLKDHFSALNLRCIERLYGDHGLDVMDILRKNPAIA 631
+ + L +E+K + + L + +R + +++ + D +D +KNP +
Sbjct: 882 QLSKTLRDYEAMSDEDKKSFKLDKWLNASSRSTTIRVLAKVFTNSAQDFIDAAQKNPLVG 941
Query: 632 LPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVA 691
L +L LK+K W++ + D N+ W + K + + K D K +K LV
Sbjct: 942 LRRILESLKEKDLLWSRFQQDTNRTWRDALDKQMSAATTILNNQHKNYDQKAFKSKPLVN 1001
Query: 692 EIKQFKENKQTEDDVLFVIAAGHRQPVIPHLEYGYS-DSNIHEDLYKLVQYSCEEMCSTK 750
+I+Q E ++ + PHL Y+ + ++ D+ + + ++ TK
Sbjct: 1002 QIEQICEERRKNNST----------DTSPHLILEYTPERKVYRDVNDVTGHFFHDLSGTK 1051
Query: 751 -DQLNKAMKLWTTFLE 765
D+ + L+ +E
Sbjct: 1052 CDRDRTKIVLFRILME 1067
Score = 180 (68.4 bits), Expect = 1.3e-33, Sum P(5) = 1.3e-33
Identities = 36/73 (49%), Positives = 45/73 (61%)
Query: 80 DALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNT 139
+AL YL+ +K F Y FLE+MKDF+AQR +T VI +V +L L+ GFNT
Sbjct: 288 EALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSPELVLGFNT 347
Query: 140 FLPKGYEITLDED 152
FLP GY ITL D
Sbjct: 348 FLPTGYRITLTPD 360
Score = 120 (47.3 bits), Expect = 1.6e-27, Sum P(5) = 1.6e-27
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 153 EAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFE 212
E PP+ +EA+ ++ IK F +D VY FLEI+ +R + + +V +VA L
Sbjct: 281 EGPPR----VDEALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLY 336
Query: 213 DHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQ 245
D +L+ F FLP +L+ + +V +S Q
Sbjct: 337 DSPELVLGFNTFLPTGYRITLTPDRKYVFSSPQ 369
Score = 80 (33.2 bits), Expect = 1.3e-33, Sum P(5) = 1.3e-33
Identities = 33/134 (24%), Positives = 61/134 (45%)
Query: 1181 SC-SDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQ-TV 1238
SC S Y + L L + +D FE+ + + + +DKL L K +
Sbjct: 1221 SCPSSSYETTLRELKQLGNAQMDIVAFEEAVKNLFPGDIVLFNNIDKLFSSLAKNIHHAT 1280
Query: 1239 AADEMDNKLIQLY-EYEE---SRKPGKQIDSV---YYENARVLLHEENIYRIQLSSSPSR 1291
A+E +N I+LY +Y + + + + ++SV Y + A +L +N YR + ++
Sbjct: 1281 CAEERENP-IKLYLKYRQRIMNAERDEDMESVIQEYGQTAEEVLRGKNTYRFEFVEEQNK 1339
Query: 1292 LSIQLMDNVIEKPE 1305
I++ VI + E
Sbjct: 1340 PFIKIW--VIPREE 1351
Score = 71 (30.1 bits), Expect = 1.3e-33, Sum P(5) = 1.3e-33
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 1130 SVEERKDCRVFYGNDDFYVLFRLHQTLYERIQWAKMNTTGA 1170
++ +++ R FYG+D Y++ R H + ER +AK+ +T A
Sbjct: 1134 NLHQKRTRRTFYGDDSVYMIIRYHHMIQER--FAKILSTQA 1172
Score = 52 (23.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 30/128 (23%), Positives = 52/128 (40%)
Query: 711 AAGHRQPVIPHLEYGYSDSNIH--EDLYKLVQ-Y--SCEEMCSTK--------DQLNKA- 756
A P+ +L+Y N ED+ ++Q Y + EE+ K ++ NK
Sbjct: 1282 AEERENPIKLYLKYRQRIMNAERDEDMESVIQEYGQTAEEVLRGKNTYRFEFVEEQNKPF 1341
Query: 757 MKLWTTFLEPMLSVPSRPSDVEGAEDAGKARHSGKNNSASSMVESDGSPGPDGTVNSRQP 816
+K+W P D E + GK + K+ + +G GPD + + P
Sbjct: 1342 IKIWVI---PREEKDDDDDDDEEGNEGGKDEDNVKDEDDGG--DGEGRDGPD---DDQPP 1393
Query: 817 ISSGNGDE 824
S+ +GD+
Sbjct: 1394 PSNDDGDD 1401
Score = 47 (21.6 bits), Expect = 1.3e-33, Sum P(5) = 1.3e-33
Identities = 40/219 (18%), Positives = 74/219 (33%)
Query: 277 DRDLSVDRPEMDDEKLMIKMQKEQXXXXXXXXXXXXXXXXXXXXXXHDNNRDFNLQRFPD 336
DR P+M L+ ++ D +R + D
Sbjct: 360 DRKYVFSSPQMQPRVLLSPDERRARAIEAGAQAVGAIELGSQEGISKDEDRTIEDEDM-D 418
Query: 337 KKKSIKKVEGFGANSSLAS-YDDKDALKSIYNQGF----IFCDKVKEKLCSDDYQAFLKC 391
K K V+G S +DK+ + + I CD K+ C D Q
Sbjct: 419 KSKEKDDVDGIDDEDDEESGIEDKNNEEMMEEDNHLIEEIICDDRKKDDCEDSQQEIEMS 478
Query: 392 LHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGH 451
+ ++ + N ++ L L + L+D F F + + + + + D
Sbjct: 479 SELAAHTL---NIIELLKKSFLARPTKLVD-FMTFIDFFMSDQQYKKDMEKLRKDDEDDE 534
Query: 452 VSRSVKIE--DKDREHKREMEVTKEKDRYKEKYYAKSIQ 488
+ + KIE D E+ K+ D ++K +K++Q
Sbjct: 535 IEENEKIEVDDVPGPSNAPQEI-KKPDDIEKKDSSKNLQ 572
Score = 46 (21.3 bits), Expect = 7.5e-14, Sum P(4) = 7.5e-14
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 462 DREHKREMEVTKEKDRYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELG 521
D+++K++ME ++ D E + I+ D+ P PDD +S+ ++
Sbjct: 516 DQQYKKDMEKLRKDDEDDEIEENEKIEVDDVPGPSNA-PQEIKKPDDIEKKDSSKNLQI- 573
Query: 522 AQVLNDHWVSV 532
+ +D+ VS+
Sbjct: 574 EESCSDYLVSM 584
Score = 39 (18.8 bits), Expect = 3.8e-13, Sum P(4) = 3.8e-13
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 556 CEDDRFELDMLLESVSSTAKRAEELLNS 583
CED + E++M E + T E L S
Sbjct: 468 CEDSQQEIEMSSELAAHTLNIIELLKKS 495
Score = 38 (18.4 bits), Expect = 5.2e-19, Sum P(4) = 5.2e-19
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 376 VKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+K SD Y FL+ + + I+ D+ V +LL +L+ FN F
Sbjct: 296 IKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSPELVLGFNTF 348
>WB|WBGene00004117 [details] [associations]
symbol:sin-3 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IGI;IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040025 "vulval development" evidence=IMP]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 GO:GO:0005634 GO:GO:0001708 GO:GO:0016246
GO:GO:0006355 GO:GO:0040011 GO:GO:0006974 GO:GO:0045138
GO:GO:0040025 GO:GO:0040027 GO:GO:0016575 Gene3D:1.20.1160.11
SUPFAM:SSF47762 EMBL:Z81494 eggNOG:COG5602 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 RefSeq:NP_001122442.1
UniGene:Cel.18986 ProteinModelPortal:A5JYW9 SMR:A5JYW9
IntAct:A5JYW9 STRING:A5JYW9 PaxDb:A5JYW9 EnsemblMetazoa:F02E9.4b
GeneID:172628 KEGG:cel:CELE_F02E9.4 UCSC:F02E9.4b CTD:172628
WormBase:F02E9.4b InParanoid:A5JYW9 OMA:ILMEWLC NextBio:876327
ArrayExpress:A5JYW9 Uniprot:A5JYW9
Length = 1507
Score = 236 (88.1 bits), Expect = 1.7e-33, Sum P(5) = 1.7e-33
Identities = 68/300 (22%), Positives = 138/300 (46%)
Query: 460 DKDREHKREMEVTKEKDRYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSE 519
D D ++++ + K +++ + ++ ++ + PSYR + D S R E
Sbjct: 763 DMDAVMRKDLPAIQPKRGLRDQKMLQQVKNVEAATVCTLGPSYRFMKDT-KATDCSGRVE 821
Query: 520 LGAQ---VLNDHWVSVTS-GSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAK 575
L VLND W S+ S SED + ++++ EE F+ ED+R+ELD++++S + +
Sbjct: 822 LDDDLKGVLNDTWTSIPSWSSEDTGSQAIKKSNLEEFHFKTEDERYELDIIVDSNRTVIE 881
Query: 576 RAEELLNSI----NENKITLETPFHLKDHFSALNLRCIERLYGDHGLDVMDILRKNPAIA 631
+ + L +E+K + + L + +R + +++ + D +D +KNP +
Sbjct: 882 QLSKTLRDYEAMSDEDKKSFKLDKWLNASSRSTTIRVLAKVFTNSAQDFIDAAQKNPLVG 941
Query: 632 LPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVA 691
L +L LK+K W++ + D N+ W + K + + K D K +K LV
Sbjct: 942 LRRILESLKEKDLLWSRFQQDTNRTWRDALDKQMSAATTILNNQHKNYDQKAFKSKPLVN 1001
Query: 692 EIKQFKENKQTEDDVLFVIAAGHRQPVIPHLEYGYS-DSNIHEDLYKLVQYSCEEMCSTK 750
+I+Q E ++ + PHL Y+ + ++ D+ + + ++ TK
Sbjct: 1002 QIEQICEERRKNNST----------DTSPHLILEYTPERKVYRDVNDVTGHFFHDLSGTK 1051
Score = 180 (68.4 bits), Expect = 1.7e-33, Sum P(5) = 1.7e-33
Identities = 36/73 (49%), Positives = 45/73 (61%)
Query: 80 DALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNT 139
+AL YL+ +K F Y FLE+MKDF+AQR +T VI +V +L L+ GFNT
Sbjct: 288 EALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSPELVLGFNT 347
Query: 140 FLPKGYEITLDED 152
FLP GY ITL D
Sbjct: 348 FLPTGYRITLTPD 360
Score = 120 (47.3 bits), Expect = 2.1e-27, Sum P(5) = 2.1e-27
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 153 EAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFE 212
E PP+ +EA+ ++ IK F +D VY FLEI+ +R + + +V +VA L
Sbjct: 281 EGPPR----VDEALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLY 336
Query: 213 DHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQ 245
D +L+ F FLP +L+ + +V +S Q
Sbjct: 337 DSPELVLGFNTFLPTGYRITLTPDRKYVFSSPQ 369
Score = 80 (33.2 bits), Expect = 1.7e-33, Sum P(5) = 1.7e-33
Identities = 33/134 (24%), Positives = 61/134 (45%)
Query: 1181 SC-SDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQ-TV 1238
SC S Y + L L + +D FE+ + + + +DKL L K +
Sbjct: 1223 SCPSSSYETTLRELKQLGNAQMDIVAFEEAVKNLFPGDIVLFNNIDKLFSSLAKNIHHAT 1282
Query: 1239 AADEMDNKLIQLY-EYEE---SRKPGKQIDSV---YYENARVLLHEENIYRIQLSSSPSR 1291
A+E +N I+LY +Y + + + + ++SV Y + A +L +N YR + ++
Sbjct: 1283 CAEERENP-IKLYLKYRQRIMNAERDEDMESVIQEYGQTAEEVLRGKNTYRFEFVEEQNK 1341
Query: 1292 LSIQLMDNVIEKPE 1305
I++ VI + E
Sbjct: 1342 PFIKIW--VIPREE 1353
Score = 71 (30.1 bits), Expect = 1.7e-33, Sum P(5) = 1.7e-33
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 1130 SVEERKDCRVFYGNDDFYVLFRLHQTLYERIQWAKMNTTGA 1170
++ +++ R FYG+D Y++ R H + ER +AK+ +T A
Sbjct: 1136 NLHQKRTRRTFYGDDSVYMIIRYHHMIQER--FAKILSTQA 1174
Score = 52 (23.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 30/128 (23%), Positives = 52/128 (40%)
Query: 711 AAGHRQPVIPHLEYGYSDSNIH--EDLYKLVQ-Y--SCEEMCSTK--------DQLNKA- 756
A P+ +L+Y N ED+ ++Q Y + EE+ K ++ NK
Sbjct: 1284 AEERENPIKLYLKYRQRIMNAERDEDMESVIQEYGQTAEEVLRGKNTYRFEFVEEQNKPF 1343
Query: 757 MKLWTTFLEPMLSVPSRPSDVEGAEDAGKARHSGKNNSASSMVESDGSPGPDGTVNSRQP 816
+K+W P D E + GK + K+ + +G GPD + + P
Sbjct: 1344 IKIWVI---PREEKDDDDDDDEEGNEGGKDEDNVKDEDDGG--DGEGRDGPD---DDQPP 1395
Query: 817 ISSGNGDE 824
S+ +GD+
Sbjct: 1396 PSNDDGDD 1403
Score = 47 (21.6 bits), Expect = 1.7e-33, Sum P(5) = 1.7e-33
Identities = 40/219 (18%), Positives = 74/219 (33%)
Query: 277 DRDLSVDRPEMDDEKLMIKMQKEQXXXXXXXXXXXXXXXXXXXXXXHDNNRDFNLQRFPD 336
DR P+M L+ ++ D +R + D
Sbjct: 360 DRKYVFSSPQMQPRVLLSPDERRARAIEAGAQAVGAIELGSQEGISKDEDRTIEDEDM-D 418
Query: 337 KKKSIKKVEGFGANSSLAS-YDDKDALKSIYNQGF----IFCDKVKEKLCSDDYQAFLKC 391
K K V+G S +DK+ + + I CD K+ C D Q
Sbjct: 419 KSKEKDDVDGIDDEDDEESGIEDKNNEEMMEEDNHLIEEIICDDRKKDDCEDSQQEIEMS 478
Query: 392 LHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGH 451
+ ++ + N ++ L L + L+D F F + + + + + D
Sbjct: 479 SELAAHTL---NIIELLKKSFLARPTKLVD-FMTFIDFFMSDQQYKKDMEKLRKDDEDDE 534
Query: 452 VSRSVKIE--DKDREHKREMEVTKEKDRYKEKYYAKSIQ 488
+ + KIE D E+ K+ D ++K +K++Q
Sbjct: 535 IEENEKIEVDDVPGPSNAPQEI-KKPDDIEKKDSSKNLQ 572
Score = 46 (21.3 bits), Expect = 7.6e-14, Sum P(4) = 7.6e-14
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 462 DREHKREMEVTKEKDRYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELG 521
D+++K++ME ++ D E + I+ D+ P PDD +S+ ++
Sbjct: 516 DQQYKKDMEKLRKDDEDDEIEENEKIEVDDVPGPSNA-PQEIKKPDDIEKKDSSKNLQI- 573
Query: 522 AQVLNDHWVSV 532
+ +D+ VS+
Sbjct: 574 EESCSDYLVSM 584
Score = 39 (18.8 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 1220 VLFTLDKLLYRLCKQLQTVAADEMDN 1245
VLF+ L+ LC++ Q V D +DN
Sbjct: 1060 VLFSYRILMEWLCQEGQQVQID-LDN 1084
Score = 39 (18.8 bits), Expect = 3.8e-13, Sum P(4) = 3.8e-13
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 556 CEDDRFELDMLLESVSSTAKRAEELLNS 583
CED + E++M E + T E L S
Sbjct: 468 CEDSQQEIEMSSELAAHTLNIIELLKKS 495
Score = 38 (18.4 bits), Expect = 6.7e-19, Sum P(4) = 6.7e-19
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 376 VKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+K SD Y FL+ + + I+ D+ V +LL +L+ FN F
Sbjct: 296 IKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSPELVLGFNTF 348
>UNIPROTKB|A5JYW9 [details] [associations]
symbol:sin-3 "Protein SIN-3, isoform b" species:6239
"Caenorhabditis elegans" [GO:0016575 "histone deacetylation"
evidence=IDA] InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
GO:GO:0005634 GO:GO:0001708 GO:GO:0016246 GO:GO:0006355
GO:GO:0040011 GO:GO:0006974 GO:GO:0045138 GO:GO:0040025
GO:GO:0040027 GO:GO:0016575 Gene3D:1.20.1160.11 SUPFAM:SSF47762
EMBL:Z81494 eggNOG:COG5602 KO:K11644 InterPro:IPR013194
Pfam:PF08295 SMART:SM00761 GeneTree:ENSGT00390000007239
RefSeq:NP_001122442.1 UniGene:Cel.18986 ProteinModelPortal:A5JYW9
SMR:A5JYW9 IntAct:A5JYW9 STRING:A5JYW9 PaxDb:A5JYW9
EnsemblMetazoa:F02E9.4b GeneID:172628 KEGG:cel:CELE_F02E9.4
UCSC:F02E9.4b CTD:172628 WormBase:F02E9.4b InParanoid:A5JYW9
OMA:ILMEWLC NextBio:876327 ArrayExpress:A5JYW9 Uniprot:A5JYW9
Length = 1507
Score = 236 (88.1 bits), Expect = 1.7e-33, Sum P(5) = 1.7e-33
Identities = 68/300 (22%), Positives = 138/300 (46%)
Query: 460 DKDREHKREMEVTKEKDRYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSE 519
D D ++++ + K +++ + ++ ++ + PSYR + D S R E
Sbjct: 763 DMDAVMRKDLPAIQPKRGLRDQKMLQQVKNVEAATVCTLGPSYRFMKDT-KATDCSGRVE 821
Query: 520 LGAQ---VLNDHWVSVTS-GSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAK 575
L VLND W S+ S SED + ++++ EE F+ ED+R+ELD++++S + +
Sbjct: 822 LDDDLKGVLNDTWTSIPSWSSEDTGSQAIKKSNLEEFHFKTEDERYELDIIVDSNRTVIE 881
Query: 576 RAEELLNSI----NENKITLETPFHLKDHFSALNLRCIERLYGDHGLDVMDILRKNPAIA 631
+ + L +E+K + + L + +R + +++ + D +D +KNP +
Sbjct: 882 QLSKTLRDYEAMSDEDKKSFKLDKWLNASSRSTTIRVLAKVFTNSAQDFIDAAQKNPLVG 941
Query: 632 LPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVA 691
L +L LK+K W++ + D N+ W + K + + K D K +K LV
Sbjct: 942 LRRILESLKEKDLLWSRFQQDTNRTWRDALDKQMSAATTILNNQHKNYDQKAFKSKPLVN 1001
Query: 692 EIKQFKENKQTEDDVLFVIAAGHRQPVIPHLEYGYS-DSNIHEDLYKLVQYSCEEMCSTK 750
+I+Q E ++ + PHL Y+ + ++ D+ + + ++ TK
Sbjct: 1002 QIEQICEERRKNNST----------DTSPHLILEYTPERKVYRDVNDVTGHFFHDLSGTK 1051
Score = 180 (68.4 bits), Expect = 1.7e-33, Sum P(5) = 1.7e-33
Identities = 36/73 (49%), Positives = 45/73 (61%)
Query: 80 DALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNT 139
+AL YL+ +K F Y FLE+MKDF+AQR +T VI +V +L L+ GFNT
Sbjct: 288 EALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSPELVLGFNT 347
Query: 140 FLPKGYEITLDED 152
FLP GY ITL D
Sbjct: 348 FLPTGYRITLTPD 360
Score = 120 (47.3 bits), Expect = 2.1e-27, Sum P(5) = 2.1e-27
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 153 EAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFE 212
E PP+ +EA+ ++ IK F +D VY FLEI+ +R + + +V +VA L
Sbjct: 281 EGPPR----VDEALAYLRVIKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLY 336
Query: 213 DHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQ 245
D +L+ F FLP +L+ + +V +S Q
Sbjct: 337 DSPELVLGFNTFLPTGYRITLTPDRKYVFSSPQ 369
Score = 80 (33.2 bits), Expect = 1.7e-33, Sum P(5) = 1.7e-33
Identities = 33/134 (24%), Positives = 61/134 (45%)
Query: 1181 SC-SDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQ-TV 1238
SC S Y + L L + +D FE+ + + + +DKL L K +
Sbjct: 1223 SCPSSSYETTLRELKQLGNAQMDIVAFEEAVKNLFPGDIVLFNNIDKLFSSLAKNIHHAT 1282
Query: 1239 AADEMDNKLIQLY-EYEE---SRKPGKQIDSV---YYENARVLLHEENIYRIQLSSSPSR 1291
A+E +N I+LY +Y + + + + ++SV Y + A +L +N YR + ++
Sbjct: 1283 CAEERENP-IKLYLKYRQRIMNAERDEDMESVIQEYGQTAEEVLRGKNTYRFEFVEEQNK 1341
Query: 1292 LSIQLMDNVIEKPE 1305
I++ VI + E
Sbjct: 1342 PFIKIW--VIPREE 1353
Score = 71 (30.1 bits), Expect = 1.7e-33, Sum P(5) = 1.7e-33
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 1130 SVEERKDCRVFYGNDDFYVLFRLHQTLYERIQWAKMNTTGA 1170
++ +++ R FYG+D Y++ R H + ER +AK+ +T A
Sbjct: 1136 NLHQKRTRRTFYGDDSVYMIIRYHHMIQER--FAKILSTQA 1174
Score = 52 (23.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 30/128 (23%), Positives = 52/128 (40%)
Query: 711 AAGHRQPVIPHLEYGYSDSNIH--EDLYKLVQ-Y--SCEEMCSTK--------DQLNKA- 756
A P+ +L+Y N ED+ ++Q Y + EE+ K ++ NK
Sbjct: 1284 AEERENPIKLYLKYRQRIMNAERDEDMESVIQEYGQTAEEVLRGKNTYRFEFVEEQNKPF 1343
Query: 757 MKLWTTFLEPMLSVPSRPSDVEGAEDAGKARHSGKNNSASSMVESDGSPGPDGTVNSRQP 816
+K+W P D E + GK + K+ + +G GPD + + P
Sbjct: 1344 IKIWVI---PREEKDDDDDDDEEGNEGGKDEDNVKDEDDGG--DGEGRDGPD---DDQPP 1395
Query: 817 ISSGNGDE 824
S+ +GD+
Sbjct: 1396 PSNDDGDD 1403
Score = 47 (21.6 bits), Expect = 1.7e-33, Sum P(5) = 1.7e-33
Identities = 40/219 (18%), Positives = 74/219 (33%)
Query: 277 DRDLSVDRPEMDDEKLMIKMQKEQXXXXXXXXXXXXXXXXXXXXXXHDNNRDFNLQRFPD 336
DR P+M L+ ++ D +R + D
Sbjct: 360 DRKYVFSSPQMQPRVLLSPDERRARAIEAGAQAVGAIELGSQEGISKDEDRTIEDEDM-D 418
Query: 337 KKKSIKKVEGFGANSSLAS-YDDKDALKSIYNQGF----IFCDKVKEKLCSDDYQAFLKC 391
K K V+G S +DK+ + + I CD K+ C D Q
Sbjct: 419 KSKEKDDVDGIDDEDDEESGIEDKNNEEMMEEDNHLIEEIICDDRKKDDCEDSQQEIEMS 478
Query: 392 LHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGH 451
+ ++ + N ++ L L + L+D F F + + + + + D
Sbjct: 479 SELAAHTL---NIIELLKKSFLARPTKLVD-FMTFIDFFMSDQQYKKDMEKLRKDDEDDE 534
Query: 452 VSRSVKIE--DKDREHKREMEVTKEKDRYKEKYYAKSIQ 488
+ + KIE D E+ K+ D ++K +K++Q
Sbjct: 535 IEENEKIEVDDVPGPSNAPQEI-KKPDDIEKKDSSKNLQ 572
Score = 46 (21.3 bits), Expect = 7.6e-14, Sum P(4) = 7.6e-14
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 462 DREHKREMEVTKEKDRYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELG 521
D+++K++ME ++ D E + I+ D+ P PDD +S+ ++
Sbjct: 516 DQQYKKDMEKLRKDDEDDEIEENEKIEVDDVPGPSNA-PQEIKKPDDIEKKDSSKNLQI- 573
Query: 522 AQVLNDHWVSV 532
+ +D+ VS+
Sbjct: 574 EESCSDYLVSM 584
Score = 39 (18.8 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 1220 VLFTLDKLLYRLCKQLQTVAADEMDN 1245
VLF+ L+ LC++ Q V D +DN
Sbjct: 1060 VLFSYRILMEWLCQEGQQVQID-LDN 1084
Score = 39 (18.8 bits), Expect = 3.8e-13, Sum P(4) = 3.8e-13
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 556 CEDDRFELDMLLESVSSTAKRAEELLNS 583
CED + E++M E + T E L S
Sbjct: 468 CEDSQQEIEMSSELAAHTLNIIELLKKS 495
Score = 38 (18.4 bits), Expect = 6.7e-19, Sum P(4) = 6.7e-19
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 376 VKEKLCSDD--YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
+K SD Y FL+ + + I+ D+ V +LL +L+ FN F
Sbjct: 296 IKSTFSSDVPVYHRFLEIMKDFRAQRIETPDVIEQVAELLYDSPELVLGFNTF 348
>TAIR|locus:2032442 [details] [associations]
symbol:AT1G24230 "AT1G24230" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602
EMBL:BT031359 IPI:IPI00548571 RefSeq:NP_173833.1 UniGene:At.49912
ProteinModelPortal:B2GVM8 SMR:B2GVM8 DNASU:839037
EnsemblPlants:AT1G24230.1 GeneID:839037 KEGG:ath:AT1G24230
TAIR:At1g24230 PhylomeDB:B2GVM8 Genevestigator:B2GVM8
Uniprot:B2GVM8
Length = 245
Score = 307 (113.1 bits), Expect = 5.8e-26, P = 5.8e-26
Identities = 63/159 (39%), Positives = 93/159 (58%)
Query: 75 KLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLI 134
K T D +Y+ +K+ F+D+ KY FLE++ D+ A+R D +AR+ +L K H NL+
Sbjct: 81 KETFHDVRSYIYSLKESFRDEPAKYAQFLEILNDYSARRVDAPSAVARMTELMKDHRNLV 140
Query: 135 FGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFH-NDEHVYKSFLEILNMY 193
GF+ L G T EA P A F++K+K RF ND HVY+SFLEIL MY
Sbjct: 141 LGFSVLLSTGDTKTTPL-EAEPDNNKRIRVA-NFISKLKARFQGNDGHVYESFLEILTMY 198
Query: 194 RKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATS 232
++ +K +N++Y EV +L + H DL+ EF+ T+ S
Sbjct: 199 QQGNKSVNDLYQEVVALLQGHEDLVMEFSNVFKRTTGPS 237
Score = 219 (82.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 56/164 (34%), Positives = 83/164 (50%)
Query: 73 SQKLTTSDALTYLKEVKDMF-QDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHN 131
S T +A +Y+ VK+ F DQ KY FL++M D +A R D A V+ R+++L K H
Sbjct: 7 SPAFTIDEATSYINAVKEAFGADQPAKYREFLDIMLDLRANRVDLATVVPRMRELLKDHV 66
Query: 132 NLIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILN 191
NL+ FN FLP A K+T F + +++ +K+ F ++ Y FLEILN
Sbjct: 67 NLLLRFNAFLP-----------AEAKET--FHDVRSYIYSLKESFRDEPAKYAQFLEILN 113
Query: 192 MYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLP--DTSATSL 233
Y D + + L +DH +L+ F+ L DT T L
Sbjct: 114 DYSARRVDAPSAVARMTELMKDHRNLVLGFSVLLSTGDTKTTPL 157
Score = 86 (35.3 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 372 FCDKVKEKLCSDD---YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFE 428
F K+K + +D Y++FL+ L +Y G NDL V LL + DL+ EF++ F+
Sbjct: 172 FISKLKARFQGNDGHVYESFLEILTMYQQGNKSVNDLYQEVVALLQGHEDLVMEFSNVFK 231
Query: 429 RCENIDG 435
R G
Sbjct: 232 RTTGPSG 238
>TAIR|locus:2165887 [details] [associations]
symbol:AT5G35610 "AT5G35610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 EMBL:AB013393
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602 IPI:IPI00519565
RefSeq:NP_198411.1 UniGene:At.55139 ProteinModelPortal:Q9FJS7
SMR:Q9FJS7 EnsemblPlants:AT5G35610.1 GeneID:833533
KEGG:ath:AT5G35610 TAIR:At5g35610 HOGENOM:HOG000147073
InParanoid:Q9FJS7 OMA:DIEYSEA PhylomeDB:Q9FJS7
Genevestigator:Q9FJS7 Uniprot:Q9FJS7
Length = 155
Score = 285 (105.4 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 66/149 (44%), Positives = 96/149 (64%)
Query: 72 TSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHN 131
++ K+T S+ YLK VK+ Q++RE Y FL+VM + AQR D +GV + VK+LFK
Sbjct: 2 SASKITKSNPRKYLKIVKNKLQNKREIYVRFLQVMTAYSAQRIDPSGVKSVVKELFKEDQ 61
Query: 132 NLIFGFNTFLPKGYEIT-----------LDEDEAPPKKTV--EFEEAITFVNKIKKRFHN 178
I GFNTFLPKG+EI L+ ++ PPKK V E+ EA+ FV K+K +
Sbjct: 62 EPISGFNTFLPKGFEIKPECDQNGFKIKLECEQTPPKKYVDIEYSEALDFVRKVK----D 117
Query: 179 DEHVYKSFLEILNMYRKEHKDINEVYSEV 207
D+ +YKSF+ I++MY+K++K ++EV EV
Sbjct: 118 DDRIYKSFVTIMDMYKKKNKSLDEVCREV 146
>TAIR|locus:2015919 [details] [associations]
symbol:AT1G27280 "AT1G27280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00521050
RefSeq:NP_174047.1 UniGene:At.51788 ProteinModelPortal:F4HR64
SMR:F4HR64 EnsemblPlants:AT1G27280.1 GeneID:839616
KEGG:ath:AT1G27280 Uniprot:F4HR64
Length = 225
Score = 249 (92.7 bits), Expect = 8.9e-20, P = 8.9e-20
Identities = 51/137 (37%), Positives = 81/137 (59%)
Query: 77 TTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFG 136
T DA++Y+ VK+ F D+ KY F ++ D + + D AG I RV++L K H NL+
Sbjct: 78 TIDDAVSYINTVKEAFHDEPAKYYEFFQLFYDIRYRLIDVAGGITRVEELLKAHKNLLVR 137
Query: 137 FNTFLPKGYE--ITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDE-HVYKSFLEILNMY 193
N FLP + + L ++ + + +F+ K+K+RF D+ HVY+SFLEIL MY
Sbjct: 138 LNAFLPPEAQRILHLKIEQRAASDINKRKRVASFIGKLKERFQGDDRHVYESFLEILTMY 197
Query: 194 RKEHKDINEVYSEVASL 210
++ +K +N++Y EV L
Sbjct: 198 QEGNKSVNDLYQEVGFL 214
Score = 156 (60.0 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 37/145 (25%), Positives = 75/145 (51%)
Query: 88 VKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTFLP----K 143
+++++ D+ EK++ L +++D+ R D A + A + +L + H NL+ F F P +
Sbjct: 1 MEEVYHDEPEKFNHILHLIRDYFNHRDDRARITACMGELMRDHLNLLVRFFDFFPAEASE 60
Query: 144 GY-EI-TLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDIN 201
G ++ T+ P T++ +A++++N +K+ FH++ Y F ++ R D+
Sbjct: 61 GLAQLQTIAATSVSPDSTID--DAVSYINTVKEAFHDEPAKYYEFFQLFYDIRYRLIDVA 118
Query: 202 EVYSEVASLFEDHADLLEEFTRFLP 226
+ V L + H +LL FLP
Sbjct: 119 GGITRVEELLKAHKNLLVRLNAFLP 143
Score = 67 (28.6 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 372 FCDKVKEKLCSDD---YQAFLKCLHIYSNGIIKRNDLQNLVTDLLG 414
F K+KE+ DD Y++FL+ L +Y G NDL V L+G
Sbjct: 171 FIGKLKERFQGDDRHVYESFLEILTMYQEGNKSVNDLYQEVGFLVG 216
>TAIR|locus:2012838 [details] [associations]
symbol:AT1G10250 "AT1G10250" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC005489
IPI:IPI00520869 PIR:H86236 RefSeq:NP_172496.1 UniGene:At.51549
STRING:Q9SY67 EnsemblPlants:AT1G10250.1 GeneID:837564
KEGG:ath:AT1G10250 TAIR:At1g10250 InParanoid:Q9SY67
PhylomeDB:Q9SY67 ProtClustDB:CLSN2912708 Genevestigator:Q9SY67
Uniprot:Q9SY67
Length = 77
Score = 239 (89.2 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 49/70 (70%), Positives = 54/70 (77%)
Query: 1190 MTALYNLLDGSID-NAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDNKLI 1248
M ALYNLLDGSID N KFEDECRAI G QSYVLFTLDKL+ + K L VA+DE D KL+
Sbjct: 1 MDALYNLLDGSIDDNTKFEDECRAIFGAQSYVLFTLDKLVQKFVKHLHAVASDETDTKLL 60
Query: 1249 QLYEYEESRK 1258
QL+ YE RK
Sbjct: 61 QLHAYENYRK 70
>TAIR|locus:2015994 [details] [associations]
symbol:AT1G27260 "AT1G27260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00548787
RefSeq:NP_174045.1 UniGene:At.51786 ProteinModelPortal:F4HR62
SMR:F4HR62 EnsemblPlants:AT1G27260.1 GeneID:839614
KEGG:ath:AT1G27260 OMA:IEDATSY Uniprot:F4HR62
Length = 222
Score = 218 (81.8 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 48/153 (31%), Positives = 80/153 (52%)
Query: 81 ALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTF 140
A Y+ V+D F+D+ KY FL +++D +A+R D A + +L K H +L+ GFN
Sbjct: 4 AFAYIIAVRDRFRDEPAKYRQFLSLLRDRRARRIDKATFFVGLVELIKDHLDLLLGFNAL 63
Query: 141 LPKGYEITLDED--------EAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNM 192
LP ++I + PP+ T+E +A +++N +K+ FH++ Y+ L++LN
Sbjct: 64 LPARFQIPITPAGFQNVVGRSVPPETTIE--DATSYLNSVKRAFHDEPAKYEELLKLLND 121
Query: 193 YRKEHKDINEVYSEVASLFEDHADLLEEFTRFL 225
D + V L +DH LL F+ FL
Sbjct: 122 IEARRVDAASFIASVEELMKDHQTLLNGFSVFL 154
Score = 144 (55.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 77 TTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFG 136
T DA +YL VK F D+ KY+ L+++ D +A+R D A IA V++L K H L+ G
Sbjct: 90 TIEDATSYLNSVKRAFHDEPAKYEELLKLLNDIEARRVDAASFIASVEELMKDHQTLLNG 149
Query: 137 FNTFL 141
F+ FL
Sbjct: 150 FSVFL 154
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 27/88 (30%), Positives = 44/88 (50%)
Query: 139 TFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHND-EHVYKSFLEILNMYRKEH 197
+F+ E+ D +V + F+ K+K +F D HV S L+IL MY + +
Sbjct: 131 SFIASVEELMKDHQTLLNGFSVFLSAEMKFIRKLKAKFQGDGSHVADSVLQILRMYSEGN 190
Query: 198 KDINEVYSEVASLFEDHADLLEEFTRFL 225
K +E + EV L +DH DL+ E + +
Sbjct: 191 KSKSEAFQEVVPLVQDHEDLVMELIKII 218
Score = 41 (19.5 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 372 FCDKVKEKLCSDDYQ---AFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDE 422
F K+K K D + L+ L +YS G +++ V L+ + DL+ E
Sbjct: 160 FIRKLKAKFQGDGSHVADSVLQILRMYSEGNKSKSEAFQEVVPLVQDHEDLVME 213
>TAIR|locus:2032362 [details] [associations]
symbol:AT1G24250 "AT1G24250" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 EMBL:AC002396
Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00521169 PIR:T00655
RefSeq:NP_173835.1 UniGene:At.51750 ProteinModelPortal:O48692
SMR:O48692 PRIDE:O48692 EnsemblPlants:AT1G24250.1 GeneID:839039
KEGG:ath:AT1G24250 TAIR:At1g24250 eggNOG:KOG4204
HOGENOM:HOG000057296 InParanoid:O48692 PhylomeDB:O48692
ProtClustDB:CLSN2682122 Genevestigator:O48692 Uniprot:O48692
Length = 252
Score = 172 (65.6 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 35/65 (53%), Positives = 45/65 (69%)
Query: 77 TTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFG 136
T DA +YL VK+ F D+ KY L+++KDFKA+R D A VIARV++L K H NL+FG
Sbjct: 117 TIDDATSYLIAVKEAFHDEPAKYGEMLKLLKDFKARRVDAACVIARVEELMKDHLNLLFG 176
Query: 137 FNTFL 141
F FL
Sbjct: 177 FCVFL 181
Score = 115 (45.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 80 DALTYLKEVKDMFQDQRE-KYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFN 138
D Y+ V+ Q+ ++ MF+ + + F A R AR++DL K H +L G N
Sbjct: 14 DVKAYVNAVEVALQEMEPARFGMFVRLFRGFTAPRIGMPTFSARMQDLLKDHPSLCLGLN 73
Query: 139 TFLPKGYEITLDEDEAPPKKTVEFEEAI 166
LP Y++T+ PP+ + EF + +
Sbjct: 74 VLLPPEYQLTI-----PPEASEEFHKVV 96
Score = 111 (44.1 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 162 FEEAIT-FVNKIKKRFHND-EHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLE 219
F A T F K+K RF D V S L+I+ MY + +K ++ Y EV +L + H DL+
Sbjct: 180 FLSATTSFTTKLKARFQGDGSQVVDSVLQIMRMYGEGNKSKHDAYQEVVALVQGHDDLVM 239
Query: 220 EFTRFLPD 227
E ++ L D
Sbjct: 240 ELSQILTD 247
Score = 92 (37.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 23/90 (25%), Positives = 46/90 (51%)
Query: 156 PKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHA 215
P+ T++ +A +++ +K+ FH++ Y L++L ++ D V + V L +DH
Sbjct: 114 PEPTID--DATSYLIAVKEAFHDEPAKYGEMLKLLKDFKARRVDAACVIARVEELMKDHL 171
Query: 216 DLLEEFTRFLPDTSATSLSHNIPFVRNSTQ 245
+LL F FL T++ + F + +Q
Sbjct: 172 NLLFGFCVFLSATTSFTTKLKARFQGDGSQ 201
Score = 42 (19.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 372 FCDKVKEKLCSDDYQ---AFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFN 424
F K+K + D Q + L+ + +Y G ++D V L+ + DL+ E +
Sbjct: 187 FTTKLKARFQGDGSQVVDSVLQIMRMYGEGNKSKHDAYQEVVALVQGHDDLVMELS 242
>TAIR|locus:2032422 [details] [associations]
symbol:AT1G24210 "AT1G24210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762
ProtClustDB:CLSN2682877 EMBL:AY086413 EMBL:BT024693 IPI:IPI00540858
RefSeq:NP_564212.1 UniGene:At.41463 ProteinModelPortal:Q8LCT6
SMR:Q8LCT6 EnsemblPlants:AT1G24210.1 GeneID:839035
KEGG:ath:AT1G24210 TAIR:At1g24210 InParanoid:Q8LCT6 OMA:VKETFHD
PhylomeDB:Q8LCT6 Genevestigator:Q8LCT6 Uniprot:Q8LCT6
Length = 155
Score = 144 (55.7 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNN 132
S LT DA +Y+ VK+ F D+ KY F++++ R D VIARV++L K H +
Sbjct: 7 SPALTKDDAHSYIIAVKETFHDEPTKYQEFIKLLNGVCDHRVDKYSVIARVEELMKDHQD 66
Query: 133 LIFGFNTFLP 142
L+ GF+ FLP
Sbjct: 67 LLLGFSVFLP 76
Score = 109 (43.4 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 168 FVNKIKKRFHN-DEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLP 226
F+NK+K RF + D HV + ++ M+++ + EV EV + H DL+E+F RF
Sbjct: 83 FINKLKTRFQSLDTHVVGAIRGLMKMFKEGKMSVKEVQEEVIDVLFYHEDLIEDFLRFFT 142
Query: 227 DTSATSLS 234
++ S
Sbjct: 143 KNPVSTAS 150
Score = 106 (42.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 163 EEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFT 222
++A +++ +K+ FH++ Y+ F+++LN D V + V L +DH DLL F+
Sbjct: 13 DDAHSYIIAVKETFHDEPTKYQEFIKLLNGVCDHRVDKYSVIARVEELMKDHQDLLLGFS 72
Query: 223 RFLPDTS 229
FLP S
Sbjct: 73 VFLPPVS 79
Score = 56 (24.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 372 FCDKVKEKLCSDDYQ---AFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFE 428
F +K+K + S D A + ++ G + ++Q V D+L + DL+++F FF
Sbjct: 83 FINKLKTRFQSLDTHVVGAIRGLMKMFKEGKMSVKEVQEEVIDVLFYHEDLIEDFLRFFT 142
Query: 429 R 429
+
Sbjct: 143 K 143
>TAIR|locus:2147870 [details] [associations]
symbol:AT5G15040 "AT5G15040" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 EMBL:AL391146
Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00528888 PIR:T51449
RefSeq:NP_197008.1 UniGene:At.54851 ProteinModelPortal:Q9LFQ1
SMR:Q9LFQ1 EnsemblPlants:AT5G15040.1 GeneID:831356
KEGG:ath:AT5G15040 TAIR:At5g15040 eggNOG:NOG238905
HOGENOM:HOG000153015 InParanoid:Q9LFQ1 OMA:MAECRAY PhylomeDB:Q9LFQ1
ProtClustDB:CLSN2916836 Genevestigator:Q9LFQ1 Uniprot:Q9LFQ1
Length = 87
Score = 212 (79.7 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 40/74 (54%), Positives = 50/74 (67%)
Query: 79 SDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFN 138
++ Y EVKD F DQ EKYDMF ++ D KA+R A++K+LFK HN LI GFN
Sbjct: 2 AECRAYFMEVKDTFHDQIEKYDMFKNILLDLKARRIGRHTAFAQLKELFKEHNELIIGFN 61
Query: 139 TFLPKGYEITLDED 152
TFLP GY+I LD+D
Sbjct: 62 TFLPTGYKIALDDD 75
>TAIR|locus:2118116 [details] [associations]
symbol:WRKY19 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0006952 "defense response"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0043531 "ADP
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009556 "microsporogenesis"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR000742 InterPro:IPR000767
InterPro:IPR002182 InterPro:IPR002290 InterPro:IPR003593
InterPro:IPR003657 InterPro:IPR003822 InterPro:IPR011009
Pfam:PF00069 Pfam:PF00931 Pfam:PF02671 Pfam:PF03106 PRINTS:PR00364
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS50811
PROSITE:PS51477 SMART:SM00181 SMART:SM00220 SMART:SM00382
SMART:SM00774 GO:GO:0005524 GO:GO:0005634 GO:GO:0007165
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0043565
GO:GO:0009941 GO:GO:0003700 GO:GO:0043531 GO:GO:0006351
GO:GO:0017111 EMBL:AL049638 EMBL:AL161533 InterPro:IPR011713
Pfam:PF07725 Gene3D:1.20.1160.11 SUPFAM:SSF47762 SUPFAM:SSF52200
Gene3D:2.20.25.80 SUPFAM:SSF118290 IPI:IPI00519247 PIR:T06609
RefSeq:NP_001118968.1 UniGene:At.3076 ProteinModelPortal:Q9SZ67
SMR:Q9SZ67 IntAct:Q9SZ67 PaxDb:Q9SZ67 PRIDE:Q9SZ67
EnsemblPlants:AT4G12020.2 GeneID:826810 KEGG:ath:AT4G12020
GeneFarm:1664 TAIR:At4g12020 InParanoid:Q9SZ67
ProtClustDB:CLSN2690875 ArrayExpress:Q9SZ67 Genevestigator:Q9SZ67
Uniprot:Q9SZ67
Length = 1895
Score = 258 (95.9 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 52/81 (64%), Positives = 63/81 (77%)
Query: 76 LTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIF 135
+TT DAL YLK VKD F+D EKYD FLEV+ D K Q DT+GVIAR+KDLFKGH++L+
Sbjct: 304 VTTGDALNYLKAVKDKFEDS-EKYDTFLEVLNDCKHQGVDTSGVIARLKDLFKGHDDLLL 362
Query: 136 GFNTFLPKGYEIT-LDEDEAP 155
GFNT+L K Y+IT L ED+ P
Sbjct: 363 GFNTYLSKEYQITILPEDDFP 383
Score = 40 (19.1 bits), Expect = 2.2e-13, Sum P(4) = 2.2e-13
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 356 YDDKDALKSIYNQGFIFCDKVKEKLCSDDYQAFLKCLHI 394
Y D + ++YN G K+ + L D L CL +
Sbjct: 1822 YSDLEIGTALYNIGTGKLPKIPDILSLDARDFILTCLKV 1860
Score = 39 (18.8 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 747 CSTKDQLNKAMKLWTTFLEPMLSVP 771
C+T L K K+ ++ + + +P
Sbjct: 1251 CTTNSSLEKLKKMRLSYSDQLTKIP 1275
Score = 38 (18.4 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 8/43 (18%), Positives = 19/43 (44%)
Query: 150 DEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNM 192
DEDE PK+ + + + + ++++ E+ N+
Sbjct: 598 DEDEPEPKRRITEVQVSELADASDRTVREPRVIFQTTSEVDNL 640
Score = 38 (18.4 bits), Expect = 2.2e-13, Sum P(4) = 2.2e-13
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 330 NLQRFPDKKKSIK 342
+L+RFPD + +K
Sbjct: 1408 SLERFPDSSRRMK 1420
Score = 37 (18.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 972 EKSVGPTKI-EKEEGELSPNGDFEEDNFGVYGDAAVKTL 1009
E S G T EK+E E P E DA+ +T+
Sbjct: 586 EDSNGETSEGEKDEDEPEPKRRITEVQVSELADASDRTV 624
Score = 37 (18.1 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 826 TSTELNNLCRTALSNGDTITKENVLDS-DRVYRDDLS-CSAL 865
T++ L L + LS D +TK L S + DL C++L
Sbjct: 1253 TNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSL 1294
>TAIR|locus:2205754 [details] [associations]
symbol:AT1G27220 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
InterPro:IPR012337 Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684
GO:GO:0005634 GO:GO:0006355 GO:GO:0003676 SUPFAM:SSF53098
Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00534786
RefSeq:NP_174042.1 UniGene:At.51783 ProteinModelPortal:F4HR59
SMR:F4HR59 EnsemblPlants:AT1G27220.1 GeneID:839611
KEGG:ath:AT1G27220 ArrayExpress:F4HR59 Uniprot:F4HR59
Length = 184
Score = 185 (70.2 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 36/73 (49%), Positives = 47/73 (64%)
Query: 75 KLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLI 134
K T DA Y++ VK F + +KYD F+ +MK+FKA++ D I VK+L KGH +LI
Sbjct: 9 KATVDDAYAYIRTVKSTFHNDPDKYDDFMAIMKNFKARKIDRNTCIEEVKELLKGHRDLI 68
Query: 135 FGFNTFLPKGYEI 147
GFN FLPK EI
Sbjct: 69 SGFNAFLPKCLEI 81
Score = 125 (49.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 156 PKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHA 215
PK TV+ +A ++ +K FHND Y F+ I+ ++ D N EV L + H
Sbjct: 8 PKATVD--DAYAYIRTVKSTFHNDPDKYDDFMAIMKNFKARKIDRNTCIEEVKELLKGHR 65
Query: 216 DLLEEFTRFLPDTSATSLSHNIPFVRNSTQ 245
DL+ F FLP + +NI + Q
Sbjct: 66 DLISGFNAFLPKCLEIADWYNIEVLEAELQ 95
>TAIR|locus:2016024 [details] [associations]
symbol:AT1G27250 "AT1G27250" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 EMBL:AC000348
Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00544484
RefSeq:NP_174044.1 UniGene:At.51785 ProteinModelPortal:O04572
SMR:O04572 PaxDb:O04572 PRIDE:O04572 EnsemblPlants:AT1G27250.1
GeneID:839613 KEGG:ath:AT1G27250 TAIR:At1g27250 eggNOG:NOG320258
HOGENOM:HOG000113937 InParanoid:O04572 OMA:GCIKEVE PhylomeDB:O04572
ProtClustDB:CLSN2682873 Genevestigator:O04572 Uniprot:O04572
Length = 137
Score = 177 (67.4 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 36/73 (49%), Positives = 46/73 (63%)
Query: 75 KLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLI 134
+ T DA YL+ V+ F + +KYD F+ VM +FKA+R D G I V+ L KGH +LI
Sbjct: 16 RATKDDAYAYLRAVRAKFHNDSKKYDDFVAVMTNFKARRIDRDGCIKEVEQLLKGHRDLI 75
Query: 135 FGFNTFLPKGYEI 147
GFN FLPK EI
Sbjct: 76 SGFNAFLPKCLEI 88
Score = 106 (42.4 bits), Expect = 0.00015, P = 0.00015
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 163 EEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFT 222
++A ++ ++ +FHND Y F+ ++ ++ D + EV L + H DL+ F
Sbjct: 20 DDAYAYLRAVRAKFHNDSKKYDDFVAVMTNFKARRIDRDGCIKEVEQLLKGHRDLISGFN 79
Query: 223 RFLP 226
FLP
Sbjct: 80 AFLP 83
>TAIR|locus:2034860 [details] [associations]
symbol:AT1G23810 "AT1G23810" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 EMBL:AC005990
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:KOG4204
HOGENOM:HOG000057296 ProtClustDB:CLSN2682122 IPI:IPI00530955
PIR:D86372 RefSeq:NP_173793.1 UniGene:At.51744
ProteinModelPortal:Q9ZUB5 SMR:Q9ZUB5 PRIDE:Q9ZUB5
EnsemblPlants:AT1G23810.1 GeneID:838992 KEGG:ath:AT1G23810
TAIR:At1g23810 InParanoid:Q9ZUB5 PhylomeDB:Q9ZUB5
Genevestigator:Q9ZUB5 Uniprot:Q9ZUB5
Length = 241
Score = 175 (66.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 44/138 (31%), Positives = 76/138 (55%)
Query: 77 TTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFG 136
T DA +YL VK+ F D+ KY+ L+++ DFKA+R + A VIARV++L K H+NL+FG
Sbjct: 106 TIDDATSYLIAVKEAFHDEPAKYEEMLKLLNDFKARRVNAASVIARVEELMKDHSNLLFG 165
Query: 137 FNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRF-HNDEHVYKSFLEILNMYRK 195
F FL T + K + + + V +I + + ++ + ++ EI+ + +
Sbjct: 166 FCVFLSATTSFTT---KLKAKFQGDGSQVVDSVLQIMRMYGEGNKSKHDAYQEIVALVQG 222
Query: 196 EHKDINEVYSEVASLFED 213
H D+ E++ +F D
Sbjct: 223 -HDDL---VMELSQIFTD 236
Score = 164 (62.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 44/177 (24%), Positives = 83/177 (46%)
Query: 80 DALTYLKEVKDMFQD-QREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFN 138
D Y+ VK ++ + KY FL + + A+R A AR++DL K H +L G N
Sbjct: 14 DGKAYVNAVKVALEEAEPAKYQEFLRLFHEVIARRMGMATFSARMQDLLKDHPSLCLGLN 73
Query: 139 TFLPKGYEITLDEDEAP----------PKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLE 188
L Y+ + + + P+ ++A +++ +K+ FH++ Y+ L+
Sbjct: 74 VMLAPEYQRAIPPEASEEFHKVVGRSVPRPEPTIDDATSYLIAVKEAFHDEPAKYEEMLK 133
Query: 189 ILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQ 245
+LN ++ + V + V L +DH++LL F FL T++ + F + +Q
Sbjct: 134 LLNDFKARRVNAASVIARVEELMKDHSNLLFGFCVFLSATTSFTTKLKAKFQGDGSQ 190
Score = 50 (22.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 372 FCDKVKEKLCSDDYQ---AFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFF 427
F K+K K D Q + L+ + +Y G ++D + L+ + DL+ E + F
Sbjct: 176 FTTKLKAKFQGDGSQVVDSVLQIMRMYGEGNKSKHDAYQEIVALVQGHDDLVMELSQIF 234
>TAIR|locus:2087203 [details] [associations]
symbol:AT3G24260 "AT3G24260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP000382
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 IPI:IPI00533121
RefSeq:NP_189069.1 UniGene:At.65146 PRIDE:Q9LK19
EnsemblPlants:AT3G24260.1 GeneID:822014 KEGG:ath:AT3G24260
TAIR:At3g24260 eggNOG:NOG324637 HOGENOM:HOG000153034
InParanoid:Q9LK19 OMA:TELLMAT PhylomeDB:Q9LK19
ProtClustDB:CLSN2914811 Genevestigator:Q9LK19 Uniprot:Q9LK19
Length = 374
Score = 176 (67.0 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 56/169 (33%), Positives = 82/169 (48%)
Query: 496 QRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRR-NQYEESLF 554
+R TP+Y+L+P + P +S VLN+ WV V S Y + + E+ ++
Sbjct: 212 ERATPNYKLIPKEEQTPVSST-------VLNNTWV-VNS----YDIQAQKNLTDIEKDMY 259
Query: 555 RCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFSALNLRCIERLYG 614
ED FELDML+ ++S AK AEE++N + LKD RC E LYG
Sbjct: 260 NWEDQMFELDMLVGFLTSAAKNAEEVINGERD----------LKD-LGGKFYRCAENLYG 308
Query: 615 DHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAK 663
D+++I+++N LP +L RL QK E T R V + K
Sbjct: 309 R---DMLEIVKENHQRVLPAILNRLNQKLREVTLVRERLKPVLKQTIEK 354
Score = 60 (26.2 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 75 KLTTSDALT-YLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
+L LT LK +++ R + ++ + KDFK+ R D + + ++ L + NL
Sbjct: 91 RLEAKQKLTELLKAIEERLT--RSELRVYTCLCKDFKSHRIDYSQFVKSLQRLIDKYKNL 148
Query: 134 IFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIK 173
+ F+ Y EDEA + V+ T +KIK
Sbjct: 149 ---YQRFVDIAYGH--GEDEAGTRVKVDDNPQDTESDKIK 183
>UNIPROTKB|H3BP90 [details] [associations]
symbol:SIN3A "Paired amphipathic helix protein Sin3a"
species:9606 "Homo sapiens" [GO:0000776 "kinetochore" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0001103 "RNA polymerase
II repressing transcription factor binding" evidence=IEA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0007568 "aging"
evidence=IEA] [GO:0010243 "response to organic nitrogen"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IEA] [GO:0051329 "interphase of mitotic cell cycle"
evidence=IEA] [GO:0051595 "response to methylglyoxal" evidence=IEA]
[GO:0071333 "cellular response to glucose stimulus" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0017053
GO:GO:0043066 GO:GO:0000776 GO:GO:0034613 GO:GO:0071333
GO:GO:0003677 GO:GO:0006260 GO:GO:0007568 GO:GO:0001701
GO:GO:0000785 GO:GO:0003700 GO:GO:0003682 GO:GO:0005667
GO:GO:0010243 GO:GO:0051595 GO:GO:0001106 GO:GO:0043619
EMBL:AC068338 Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0051329
HGNC:HGNC:19353 ChiTaRS:SIN3A EMBL:AC105137 Ensembl:ENST00000564778
Bgee:H3BP90 Uniprot:H3BP90
Length = 176
Score = 159 (61.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 31/57 (54%), Positives = 41/57 (71%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGH 130
Q+L DAL+YL +VK F Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH
Sbjct: 119 QRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGH 175
>TAIR|locus:2032427 [details] [associations]
symbol:AT1G24220 "AT1G24220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 EMBL:AC002396
Gene3D:1.20.1160.11 SUPFAM:SSF47762 IPI:IPI00536064 PIR:T00652
RefSeq:NP_173832.1 UniGene:At.51749 ProteinModelPortal:O48689
SMR:O48689 EnsemblPlants:AT1G24220.1 GeneID:839036
KEGG:ath:AT1G24220 TAIR:At1g24220 eggNOG:NOG127728
HOGENOM:HOG000114710 InParanoid:O48689 OMA:RRTIPSE PhylomeDB:O48689
ProtClustDB:CLSN2914177 Genevestigator:O48689 Uniprot:O48689
Length = 744
Score = 163 (62.4 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 37/97 (38%), Positives = 54/97 (55%)
Query: 77 TTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFG 136
T DA +Y+ VK+ F D+ KY FL+++ D+KA+R D VIARV +L K H NL+ G
Sbjct: 173 TLDDARSYIDSVKEAFHDEPAKYAEFLKLLNDYKARRLDADSVIARVDELTKDHRNLLLG 232
Query: 137 FNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIK 173
L + T+ +A K+T E + T K+K
Sbjct: 233 LRAILLPAAKSTIPH-KAKGKRTARPEASRTIPVKLK 268
Score = 135 (52.6 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 73 SQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNN 132
SQ+ T +DA++Y++ VK+ F D+ K+D F + + + R + + AR+ +L G+
Sbjct: 7 SQEPTMADAVSYIESVKEEFHDEPAKFDEFRMRLNEVRDDRVEKDRITARINELISGNPK 66
Query: 133 LIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILN- 191
L G F P+ EIT+ PPK E V+ KKR + + H K L+ L+
Sbjct: 67 LHLGSKVFFPEA-EITI-----PPKVEQRHES----VDAKKKRANRENHRKKK-LKCLDS 115
Query: 192 -MYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLP 226
++ K I+E V + + +L + R +P
Sbjct: 116 LVFPPMTKKIDEGKKSVKKVHKKFL-VLSKVDRTIP 150
Score = 133 (51.9 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 34/91 (37%), Positives = 44/91 (48%)
Query: 137 FNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHN-DEHVYKSFLEILNMYRK 195
F LP T+ + P T E + F+NK+K RF D HV SF I+ MY++
Sbjct: 349 FMNKLPTKARRTIPSEAEKPTHTDE----LNFMNKLKTRFQRIDTHVVGSFHSIMTMYKE 404
Query: 196 EHKDINEVYSEVASLFEDHADLLEEFTRFLP 226
K EV+ EV L H DL +FTR P
Sbjct: 405 GKKSRKEVHEEVCDLLYYHEDLRADFTRIFP 435
Score = 120 (47.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 31/106 (29%), Positives = 52/106 (49%)
Query: 77 TTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFG 136
T + +TY+ +VK+ F D+ K+ FL +M D + + A AR+ ++ KGH L+
Sbjct: 499 TIRETVTYIADVKEAFLDEPAKFHEFLRLMNDVCDHKIEEANGSARMAEIIKGHPRLLLV 558
Query: 137 FNTFLPKG--YE-----ITLDEDEA-PPKKTVEFEEAITFVNKIKK 174
+ F PK YE I+ + PPK T+ + + T K +
Sbjct: 559 LSVFFPKSKQYEEAARSISSEASRTIPPKATIPPKSSRTISPKANR 604
Score = 62 (26.9 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 389 LKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFERCENIDGFL 437
L+ L +YS G +++ V LL ++DL+ EF +F + FL
Sbjct: 691 LQILKMYSEGNKSKDEAYQEVVSLLQNHVDLVMEFGDYFSGISAYNRFL 739
Score = 40 (19.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 926 AKDDLKHEANVNPVPPSE 943
AK + EAN N + PSE
Sbjct: 618 AKRTIPREANRNRIMPSE 635
>TAIR|locus:2015899 [details] [associations]
symbol:AT1G27270 "AT1G27270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 EMBL:AC004557
Gene3D:1.20.1160.11 SUPFAM:SSF47762 HOGENOM:HOG000057296
ProtClustDB:CLSN2682122 IPI:IPI00525539 RefSeq:NP_174046.1
UniGene:At.51787 ProteinModelPortal:Q9FZK9 SMR:Q9FZK9
EnsemblPlants:AT1G27270.1 GeneID:839615 KEGG:ath:AT1G27270
TAIR:At1g27270 eggNOG:NOG309267 InParanoid:Q9FZK9 OMA:MDDATSY
PhylomeDB:Q9FZK9 Genevestigator:Q9FZK9 Uniprot:Q9FZK9
Length = 241
Score = 150 (57.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 43/171 (25%), Positives = 75/171 (43%)
Query: 73 SQKLTTSDALTYLKEVKDMFQD-QREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHN 131
S + D + Y VK QD + EKY F+ + D+ A R + A +++L + H
Sbjct: 7 SPEFNFEDGMAYFDAVKVALQDTEPEKYQEFVRIFIDYTANRFGFETLSASLQELLRDHA 66
Query: 132 NLIFGFNTFLPKGYEITLDEDEA-------------PPKKTVE-FEEAITFVNKIKKRFH 177
NL G N LP + + + + PP V ++A +++N +K+ FH
Sbjct: 67 NLCHGSNVLLPFRLQTAIPPEASAEFHINKVVGRSVPPAVAVPTMDDATSYLNAVKEAFH 126
Query: 178 NDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDT 228
++ Y ++L + + V + + L +DH +LL F FL T
Sbjct: 127 DEPAKYMEITKLLTDLKARRINAASVIARMEELLKDHLNLLLGFCVFLSPT 177
Score = 50 (22.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 372 FCDKVKEKLCSDDYQ---AFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFF 427
F K+K + D Q + L+ L ++S G +++ V L+ + DL+ E + F
Sbjct: 180 FITKLKARFLGDGSQVVDSVLQILRMHSEGNKSKDEASQEVRALIQGHEDLLMELSEIF 238
>TAIR|locus:2015949 [details] [associations]
symbol:AT1G27240 "AT1G27240" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 EMBL:AC004557
EMBL:AC000348 Gene3D:1.20.1160.11 SUPFAM:SSF47762 HSSP:Q62141
IPI:IPI00544967 RefSeq:NP_174043.1 UniGene:At.51784
ProteinModelPortal:O04571 SMR:O04571 EnsemblPlants:AT1G27240.1
GeneID:839612 KEGG:ath:AT1G27240 TAIR:At1g27240 eggNOG:NOG292628
HOGENOM:HOG000113936 InParanoid:O04571 OMA:THVVESF PhylomeDB:O04571
ProtClustDB:CLSN2682877 Genevestigator:O04571 Uniprot:O04571
Length = 186
Score = 138 (53.6 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 36/142 (25%), Positives = 69/142 (48%)
Query: 77 TTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFG 136
T SDA +Y+ VK+ F D+ KY+ F+++M D + D A IA++ +L KGH L+ G
Sbjct: 11 TLSDAHSYITAVKEAFHDEPTKYEEFIKLMNDIRDHGVDKASGIAKLTELIKGHPRLLRG 70
Query: 137 FNTFLPK-GYEITLDEDEA---PPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNM 192
+ F P+ +I + K T+ E A + E +++F+ +L
Sbjct: 71 LSFFFPQVNRDIHHEAKRTIILKDKATIPPEAAYRGAKSTYTKIKQIEPDWENFMNMLKT 130
Query: 193 -YRKEHKDINEVYSEVASLFED 213
+R + E + ++ ++++
Sbjct: 131 RFRSLDTHVVESFLKIMIMYDE 152
Score = 113 (44.8 bits), Expect = 0.00087, P = 0.00087
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 168 FVNKIKKRFHN-DEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTR 223
F+N +K RF + D HV +SFL+I+ MY + K EV EV L H DL+++F R
Sbjct: 124 FMNMLKTRFRSLDTHVVESFLKIMIMYDEGKKSEKEVQEEVVDLLYYHEDLIDKFFR 180
>TAIR|locus:2090744 [details] [associations]
symbol:AT3G28870 "AT3G28870" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 InterPro:IPR004179 SMART:SM00973
InterPro:IPR013194 Pfam:PF08295 IPI:IPI00541068 RefSeq:NP_189529.1
UniGene:At.53548 ProteinModelPortal:F4J0F5 SMR:F4J0F5
EnsemblPlants:AT3G28870.1 GeneID:822521 KEGG:ath:AT3G28870
ArrayExpress:F4J0F5 Uniprot:F4J0F5
Length = 355
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 543 HMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFS 602
H EE +++ ED+ FE+DML+ ++S + A+E++ E LKD
Sbjct: 142 HKNLTDIEEDMYKWEDEMFEVDMLMRVLTSAVESAKEVIKGEME----------LKD-LG 190
Query: 603 ALNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYA 662
A RC+E LYG+ D+ + + ++ ALP++L+RLKQK T R +W +
Sbjct: 191 AKFYRCVEMLYGE---DMFETVTEDHQRALPMILSRLKQKLRHVTTARERLKPLWKQTIE 247
Query: 663 K 663
K
Sbjct: 248 K 248
>ZFIN|ZDB-GENE-060503-728 [details] [associations]
symbol:si:dkey-27c15.3 "si:dkey-27c15.3"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR003822
InterPro:IPR009057 Pfam:PF02671 PROSITE:PS51477
ZFIN:ZDB-GENE-060503-728 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG83563 SUPFAM:SSF47762
EMBL:BX465837 IPI:IPI01006164 UniGene:Dr.157826 UniGene:Dr.99641
InParanoid:Q1LXD0 OrthoDB:EOG4TF0KZ Uniprot:Q1LXD0
Length = 1422
Score = 129 (50.5 bits), Expect = 0.00067, P = 0.00067
Identities = 49/184 (26%), Positives = 82/184 (44%)
Query: 98 KYDMFLEVMKDF-KAQRTDTA-GVIARVKDLFKGHNNLIFGFNTFL-P-KGYEI-TLDED 152
K D FL ++ DF K + T+ ++ R+K + + L+ F FL P + E L E
Sbjct: 1150 KVDEFLCILSDFVKNPESHTSLQLLMRLKPILEDWPELLQDFAAFLHPDQARECGLLAEQ 1209
Query: 153 EAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEH-KDINEVYSEVASLF 211
+A FE + F+ +++ F ++Y+ + IL + + D+ E+ +E+A L
Sbjct: 1210 QA-------FERSRGFLRQLESTFGEQSYLYRKVVHILQGDQSQGLADLKEIKAEMALLL 1262
Query: 212 EDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQRGNERSAGIPPLRQMQMDKHRRRDRI 271
DH DLLEEF + + N+ T + E P R M DK D+
Sbjct: 1263 RDHTDLLEEFWEYFKQIYP-QVQENV-----ETNQVLEEKQPSQPSRNMLADKKLETDKT 1316
Query: 272 ATSH 275
+ H
Sbjct: 1317 SIKH 1320
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1419 1313 0.00084 124 3 11 22 0.43 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 51
No. of states in DFA: 627 (67 KB)
Total size of DFA: 566 KB (2255 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 142.03u 0.11s 142.14t Elapsed: 00:00:07
Total cpu time: 142.06u 0.11s 142.17t Elapsed: 00:00:07
Start: Tue May 21 18:32:31 2013 End: Tue May 21 18:32:38 2013