Query 000562
Match_columns 1419
No_of_seqs 850 out of 5897
Neff 7.8
Searched_HMMs 46136
Date Mon Apr 1 19:23:45 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000562.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000562hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 3E-255 6E-260 2347.3 95.9 1343 19-1419 12-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 2E-237 5E-242 2352.8 142.8 1415 5-1419 23-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 7E-186 2E-190 1866.7 132.4 1286 77-1414 3-1389(1394)
4 PLN03211 ABC transporter G-25; 100.0 1.2E-94 2.5E-99 914.0 62.2 585 813-1416 36-659 (659)
5 KOG0061 Transporter, ABC super 100.0 5.2E-95 1.1E-99 907.3 56.9 580 813-1418 22-611 (613)
6 TIGR00955 3a01204 The Eye Pigm 100.0 2.6E-94 5.6E-99 913.3 61.7 569 840-1419 36-617 (617)
7 TIGR00956 3a01205 Pleiotropic 100.0 7.3E-92 1.6E-96 951.2 64.2 566 840-1416 72-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 6E-91 1.3E-95 936.6 60.9 595 811-1415 126-789 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 8.3E-86 1.8E-90 825.0 40.7 568 840-1417 126-732 (1391)
10 KOG0061 Transporter, ABC super 100.0 3.3E-79 7.2E-84 765.0 58.3 582 97-758 21-608 (613)
11 TIGR00955 3a01204 The Eye Pigm 100.0 3.4E-78 7.4E-83 766.1 58.9 569 145-757 35-612 (617)
12 PLN03211 ABC transporter G-25; 100.0 2.8E-77 6E-82 755.8 62.2 608 96-758 34-658 (659)
13 KOG0055 Multidrug/pheromone ex 100.0 3.4E-72 7.5E-77 705.6 53.8 777 142-1054 360-1208(1228)
14 KOG0054 Multidrug resistance-a 100.0 6.8E-72 1.5E-76 720.6 53.4 745 148-1055 534-1358(1381)
15 TIGR01257 rim_protein retinal- 100.0 5.2E-69 1.1E-73 722.1 69.0 209 842-1066 1952-2162(2272)
16 PLN03130 ABC transporter C fam 100.0 1.5E-66 3.3E-71 711.1 63.6 210 816-1054 1237-1456(1622)
17 PLN03232 ABC transporter C fam 100.0 1.4E-65 3E-70 702.8 62.2 210 816-1054 1234-1453(1495)
18 COG1123 ATPase components of v 100.0 4.2E-65 9E-70 604.4 49.8 474 148-1054 22-514 (539)
19 TIGR00957 MRP_assoc_pro multi 100.0 4.2E-64 9.2E-69 689.1 59.8 210 816-1054 1284-1503(1522)
20 PTZ00265 multidrug resistance 100.0 8.5E-64 1.8E-68 677.9 58.4 216 816-1054 1165-1447(1466)
21 PRK13549 xylose transporter AT 100.0 2.6E-63 5.7E-68 619.7 48.4 460 148-1056 18-491 (506)
22 PRK10762 D-ribose transporter 100.0 6.2E-63 1.3E-67 615.6 48.7 450 148-1056 17-481 (501)
23 PRK09700 D-allose transporter 100.0 4.6E-63 1E-67 618.6 46.9 458 148-1054 18-493 (510)
24 PRK10261 glutathione transport 100.0 1E-62 2.2E-67 625.4 50.1 488 148-1055 29-549 (623)
25 PTZ00243 ABC transporter; Prov 100.0 7.2E-62 1.6E-66 664.6 60.2 210 816-1054 1308-1528(1560)
26 PRK15134 microcin C ABC transp 100.0 4E-62 8.6E-67 612.3 51.0 464 148-1054 22-510 (529)
27 PRK15439 autoinducer 2 ABC tra 100.0 3.1E-62 6.8E-67 609.5 48.4 452 149-1055 25-488 (510)
28 TIGR01271 CFTR_protein cystic 100.0 7.8E-61 1.7E-65 654.7 63.9 209 816-1054 1217-1435(1490)
29 TIGR02633 xylG D-xylose ABC tr 100.0 8.3E-62 1.8E-66 606.3 48.8 460 148-1055 14-488 (500)
30 PRK11288 araG L-arabinose tran 100.0 8.5E-62 1.8E-66 605.4 47.5 450 149-1056 18-482 (501)
31 TIGR03269 met_CoM_red_A2 methy 100.0 1.2E-61 2.6E-66 607.3 48.9 445 148-1054 13-512 (520)
32 PRK10982 galactose/methyl gala 100.0 1.5E-60 3.2E-65 593.3 48.5 450 148-1055 11-476 (491)
33 COG4172 ABC-type uncharacteriz 100.0 7.4E-59 1.6E-63 515.2 43.1 471 146-1054 21-511 (534)
34 PRK10938 putative molybdenum t 100.0 2E-59 4.2E-64 583.5 42.5 447 149-1052 17-485 (490)
35 PRK11819 putative ABC transpor 100.0 2.5E-57 5.4E-62 570.7 49.4 189 841-1053 336-527 (556)
36 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.4E-56 3.1E-61 563.9 49.9 189 841-1053 334-525 (552)
37 PRK15064 ABC transporter ATP-b 100.0 1.3E-56 2.8E-61 562.7 49.3 186 841-1054 331-520 (530)
38 PRK13409 putative ATPase RIL; 100.0 4.9E-55 1.1E-59 546.7 41.1 199 844-1071 354-556 (590)
39 PRK10636 putative ABC transpor 100.0 7.5E-54 1.6E-58 544.4 52.0 185 841-1054 324-512 (638)
40 COG1129 MglA ABC-type sugar tr 100.0 4.4E-54 9.5E-59 507.6 44.6 452 147-1055 20-486 (500)
41 PRK11147 ABC transporter ATPas 100.0 4.2E-54 9.2E-59 548.4 48.0 190 841-1054 331-523 (635)
42 PLN03073 ABC transporter F fam 100.0 5.2E-52 1.1E-56 527.7 43.3 186 842-1054 522-709 (718)
43 COG0488 Uup ATPase components 100.0 5.8E-51 1.3E-55 495.7 40.8 218 148-395 16-238 (530)
44 COG3845 ABC-type uncharacteriz 100.0 8.7E-50 1.9E-54 459.5 38.8 458 147-1056 16-489 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 1.6E-44 3.6E-49 375.1 20.6 211 833-1054 6-220 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 5E-43 1.1E-47 364.1 20.9 221 147-418 14-238 (240)
47 KOG0927 Predicted transporter 100.0 3.6E-42 7.8E-47 396.6 28.3 186 843-1054 404-591 (614)
48 COG1131 CcmA ABC-type multidru 100.0 1.8E-41 3.9E-46 390.5 23.4 216 836-1067 11-230 (293)
49 COG1127 Ttg2A ABC-type transpo 100.0 1.6E-41 3.5E-46 358.3 19.7 226 833-1069 12-249 (263)
50 COG1135 AbcC ABC-type metal io 100.0 3.1E-41 6.7E-46 368.0 22.1 224 146-420 17-246 (339)
51 COG1120 FepC ABC-type cobalami 100.0 2.1E-41 4.6E-46 372.2 19.9 212 836-1056 9-225 (258)
52 COG1125 OpuBA ABC-type proline 100.0 6E-41 1.3E-45 354.4 20.2 210 147-397 13-225 (309)
53 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 9.2E-41 2E-45 364.9 22.4 203 843-1056 18-224 (254)
54 COG1135 AbcC ABC-type metal io 100.0 6E-41 1.3E-45 365.7 18.3 203 841-1055 18-227 (339)
55 COG1116 TauB ABC-type nitrate/ 100.0 1.4E-40 3E-45 357.8 19.8 194 839-1045 13-207 (248)
56 COG1125 OpuBA ABC-type proline 100.0 1E-40 2.2E-45 352.6 18.1 210 834-1055 6-221 (309)
57 COG3839 MalK ABC-type sugar tr 100.0 1.8E-40 3.9E-45 378.5 21.1 217 150-417 18-235 (338)
58 COG3638 ABC-type phosphate/pho 100.0 9.8E-41 2.1E-45 351.5 16.8 208 840-1056 15-234 (258)
59 COG1118 CysA ABC-type sulfate/ 100.0 3.3E-40 7.2E-45 358.7 19.6 223 147-418 14-240 (345)
60 COG3842 PotA ABC-type spermidi 100.0 3E-40 6.4E-45 378.7 19.7 223 147-419 17-240 (352)
61 COG4555 NatA ABC-type Na+ tran 100.0 1.4E-40 3E-45 340.1 15.0 201 843-1055 16-218 (245)
62 COG1118 CysA ABC-type sulfate/ 100.0 2.6E-40 5.6E-45 359.5 17.9 209 837-1055 10-223 (345)
63 COG1120 FepC ABC-type cobalami 100.0 3.7E-40 7.9E-45 362.4 18.8 210 148-396 15-227 (258)
64 TIGR01257 rim_protein retinal- 100.0 1.9E-35 4.2E-40 399.0 68.4 208 841-1065 942-1151(2272)
65 COG1131 CcmA ABC-type multidru 100.0 1.3E-39 2.7E-44 375.2 23.7 212 147-401 17-230 (293)
66 COG1136 SalX ABC-type antimicr 100.0 1.2E-39 2.7E-44 351.4 20.9 192 842-1045 18-218 (226)
67 COG1127 Ttg2A ABC-type transpo 100.0 2.7E-39 5.8E-44 341.5 22.0 210 147-397 20-235 (263)
68 COG3839 MalK ABC-type sugar tr 100.0 1.3E-39 2.8E-44 371.4 19.8 208 836-1055 10-219 (338)
69 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 6.2E-39 1.3E-43 350.6 24.0 206 149-396 18-226 (254)
70 COG1116 TauB ABC-type nitrate/ 100.0 3.1E-39 6.6E-44 347.5 20.6 192 148-384 16-207 (248)
71 COG1117 PstB ABC-type phosphat 100.0 1.6E-39 3.4E-44 335.8 17.0 221 148-416 20-248 (253)
72 COG4555 NatA ABC-type Na+ tran 100.0 1.9E-39 4.2E-44 331.7 16.7 206 148-397 15-222 (245)
73 COG3842 PotA ABC-type spermidi 100.0 2.4E-39 5.1E-44 371.2 19.1 211 834-1055 10-222 (352)
74 COG3638 ABC-type phosphate/pho 100.0 1.6E-38 3.5E-43 334.7 21.1 215 148-397 17-237 (258)
75 COG1117 PstB ABC-type phosphat 100.0 6.5E-39 1.4E-43 331.2 16.0 206 840-1054 18-232 (253)
76 COG1136 SalX ABC-type antimicr 100.0 4.9E-38 1.1E-42 339.1 22.5 196 147-386 17-220 (226)
77 PRK13537 nodulation ABC transp 100.0 4.3E-38 9.4E-43 366.1 23.7 203 840-1054 18-222 (306)
78 COG2884 FtsE Predicted ATPase 100.0 4.5E-38 9.7E-43 319.4 19.3 201 841-1054 14-221 (223)
79 KOG0058 Peptide exporter, ABC 100.0 2.2E-38 4.8E-43 380.4 19.9 214 142-397 475-691 (716)
80 TIGR02314 ABC_MetN D-methionin 100.0 2.1E-37 4.5E-42 362.8 27.1 206 148-396 18-229 (343)
81 COG1137 YhbG ABC-type (unclass 100.0 7.5E-39 1.6E-43 327.0 12.7 213 833-1055 8-224 (243)
82 COG2274 SunT ABC-type bacterio 100.0 1.3E-37 2.9E-42 390.6 24.0 256 61-397 436-696 (709)
83 cd03261 ABC_Org_Solvent_Resist 100.0 2.5E-37 5.3E-42 348.3 23.3 203 841-1054 12-221 (235)
84 PRK11650 ugpC glycerol-3-phosp 100.0 2E-37 4.3E-42 366.2 23.2 203 841-1055 16-220 (356)
85 TIGR03265 PhnT2 putative 2-ami 100.0 2.3E-37 4.9E-42 365.3 23.4 204 840-1055 15-220 (353)
86 PRK11650 ugpC glycerol-3-phosp 100.0 2.9E-37 6.4E-42 364.8 24.3 206 148-396 17-223 (356)
87 COG1124 DppF ABC-type dipeptid 100.0 2.9E-37 6.3E-42 328.4 21.7 205 149-397 21-231 (252)
88 TIGR02314 ABC_MetN D-methionin 100.0 3.2E-37 6.9E-42 361.3 23.6 201 842-1054 18-225 (343)
89 PRK11432 fbpC ferric transport 100.0 3.5E-37 7.6E-42 363.0 23.6 203 841-1055 18-222 (351)
90 PRK11432 fbpC ferric transport 100.0 4.3E-37 9.4E-42 362.2 24.4 206 148-396 19-225 (351)
91 PRK13536 nodulation factor exp 100.0 4.1E-37 9E-42 361.3 24.0 204 839-1054 51-256 (340)
92 TIGR01188 drrA daunorubicin re 100.0 3.9E-37 8.3E-42 358.7 23.3 203 840-1054 4-208 (302)
93 TIGR03258 PhnT 2-aminoethylpho 100.0 5.2E-37 1.1E-41 362.6 24.3 206 149-396 19-227 (362)
94 TIGR03265 PhnT2 putative 2-ami 100.0 5.3E-37 1.1E-41 362.2 24.3 206 148-396 17-223 (353)
95 COG3840 ThiQ ABC-type thiamine 100.0 2.8E-37 6.1E-42 310.5 18.3 201 153-396 17-218 (231)
96 TIGR03258 PhnT 2-aminoethylpho 100.0 4.7E-37 1E-41 362.9 23.4 203 841-1055 17-224 (362)
97 PRK13537 nodulation ABC transp 100.0 1.1E-36 2.4E-41 354.3 25.4 206 148-397 20-227 (306)
98 TIGR01186 proV glycine betaine 100.0 9.2E-37 2E-41 359.1 25.0 206 148-396 6-218 (363)
99 COG0411 LivG ABC-type branched 100.0 3E-37 6.5E-42 328.7 18.1 214 833-1055 8-235 (250)
100 cd03259 ABC_Carb_Solutes_like 100.0 8.3E-37 1.8E-41 338.8 22.4 200 841-1052 12-213 (213)
101 COG1122 CbiO ABC-type cobalt t 100.0 9.2E-37 2E-41 336.5 22.3 207 148-397 17-228 (235)
102 PRK09452 potA putrescine/sperm 100.0 1.1E-36 2.3E-41 361.1 24.4 218 148-416 27-245 (375)
103 PRK10851 sulfate/thiosulfate t 100.0 8.6E-37 1.9E-41 360.4 23.5 206 840-1054 13-221 (353)
104 TIGR01186 proV glycine betaine 100.0 1.3E-36 2.7E-41 357.9 24.1 204 840-1055 4-215 (363)
105 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.9E-36 4.2E-41 337.5 23.7 200 842-1054 17-218 (220)
106 COG2884 FtsE Predicted ATPase 100.0 1.4E-36 3E-41 308.6 20.1 199 148-390 15-219 (223)
107 TIGR01288 nodI ATP-binding ABC 100.0 1.5E-36 3.2E-41 354.0 23.5 203 840-1054 15-219 (303)
108 PRK09452 potA putrescine/sperm 100.0 1.4E-36 3E-41 360.1 23.6 202 841-1054 26-229 (375)
109 cd03269 ABC_putative_ATPase Th 100.0 1.7E-36 3.6E-41 335.7 22.4 199 841-1052 12-210 (210)
110 COG1124 DppF ABC-type dipeptid 100.0 6E-37 1.3E-41 326.0 17.9 199 843-1055 21-227 (252)
111 COG1122 CbiO ABC-type cobalt t 100.0 9.1E-37 2E-41 336.6 20.0 201 842-1054 17-223 (235)
112 COG3840 ThiQ ABC-type thiamine 100.0 4.9E-37 1.1E-41 308.8 16.1 196 847-1054 17-214 (231)
113 cd03265 ABC_DrrA DrrA is the A 100.0 2E-36 4.3E-41 337.4 22.9 202 841-1054 12-216 (220)
114 TIGR00960 3a0501s02 Type II (G 100.0 1.5E-36 3.2E-41 337.6 21.0 194 842-1047 16-215 (216)
115 cd03219 ABC_Mj1267_LivG_branch 100.0 2.8E-36 6.1E-41 340.1 23.3 205 841-1054 12-227 (236)
116 PRK11607 potG putrescine trans 100.0 2.5E-36 5.4E-41 358.7 23.8 203 841-1055 31-235 (377)
117 KOG0057 Mitochondrial Fe/S clu 100.0 1.4E-36 3E-41 352.5 20.9 229 93-397 343-574 (591)
118 cd03301 ABC_MalK_N The N-termi 100.0 2.9E-36 6.2E-41 334.6 22.7 200 841-1052 12-213 (213)
119 PRK10851 sulfate/thiosulfate t 100.0 3.6E-36 7.7E-41 355.1 24.5 210 148-396 15-225 (353)
120 TIGR03522 GldA_ABC_ATP gliding 100.0 2.8E-36 6E-41 351.0 23.2 202 840-1054 13-216 (301)
121 PRK11000 maltose/maltodextrin 100.0 2.8E-36 6E-41 359.0 23.6 202 841-1054 15-218 (369)
122 cd03218 ABC_YhbG The ABC trans 100.0 3.2E-36 6.9E-41 338.8 22.8 203 840-1054 11-217 (232)
123 cd03260 ABC_PstB_phosphate_tra 100.0 2.8E-36 6.2E-41 337.9 21.9 203 841-1054 12-224 (227)
124 cd03296 ABC_CysA_sulfate_impor 100.0 4.2E-36 9E-41 339.1 23.4 205 841-1054 14-221 (239)
125 cd03266 ABC_NatA_sodium_export 100.0 2.9E-36 6.4E-41 335.7 21.8 198 843-1052 19-218 (218)
126 PRK11607 potG putrescine trans 100.0 4.4E-36 9.6E-41 356.5 24.5 206 148-396 32-238 (377)
127 COG0410 LivF ABC-type branched 100.0 1.6E-36 3.4E-41 320.8 18.3 210 833-1055 7-222 (237)
128 cd03261 ABC_Org_Solvent_Resist 100.0 6.1E-36 1.3E-40 337.0 24.3 206 148-395 13-224 (235)
129 PRK11153 metN DL-methionine tr 100.0 4E-36 8.8E-41 354.8 23.7 201 842-1054 18-225 (343)
130 PRK11153 metN DL-methionine tr 100.0 9.5E-36 2.1E-40 351.7 26.7 206 148-396 18-229 (343)
131 PRK09536 btuD corrinoid ABC tr 100.0 2.8E-36 6E-41 359.2 22.3 207 840-1055 14-224 (402)
132 cd03226 ABC_cobalt_CbiO_domain 100.0 2.3E-36 5.1E-41 333.1 20.1 192 842-1049 13-205 (205)
133 cd03268 ABC_BcrA_bacitracin_re 100.0 3.2E-36 6.9E-41 332.9 21.2 196 841-1052 12-208 (208)
134 TIGR01188 drrA daunorubicin re 100.0 4.2E-36 9.1E-41 349.9 23.3 206 148-397 6-213 (302)
135 COG4559 ABC-type hemin transpo 100.0 2.3E-36 4.9E-41 311.6 18.2 207 840-1056 12-227 (259)
136 PRK11000 maltose/maltodextrin 100.0 7.7E-36 1.7E-40 355.2 24.7 206 148-396 16-222 (369)
137 COG2274 SunT ABC-type bacterio 100.0 1.1E-34 2.5E-39 364.2 36.5 214 813-1054 468-691 (709)
138 COG0410 LivF ABC-type branched 100.0 6.7E-36 1.4E-40 316.0 21.3 205 148-396 16-225 (237)
139 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.4E-36 9.4E-41 334.4 21.1 193 842-1047 17-217 (218)
140 COG0411 LivG ABC-type branched 100.0 1.9E-36 4.2E-41 322.5 17.1 221 146-397 15-239 (250)
141 cd03256 ABC_PhnC_transporter A 100.0 5.3E-36 1.2E-40 339.0 21.8 204 842-1054 14-229 (241)
142 cd03258 ABC_MetN_methionine_tr 100.0 7.3E-36 1.6E-40 336.0 22.4 200 843-1054 19-225 (233)
143 cd03294 ABC_Pro_Gly_Bertaine T 100.0 8.8E-36 1.9E-40 341.7 23.2 209 834-1054 29-245 (269)
144 PRK13536 nodulation factor exp 100.0 1.3E-35 2.8E-40 348.6 24.8 206 148-397 54-261 (340)
145 cd03263 ABC_subfamily_A The AB 100.0 8.3E-36 1.8E-40 332.6 22.0 200 842-1054 15-216 (220)
146 PRK09493 glnQ glutamine ABC tr 100.0 1.1E-35 2.3E-40 336.1 23.0 203 841-1054 13-220 (240)
147 cd03234 ABCG_White The White s 100.0 1.6E-35 3.5E-40 331.4 24.1 205 842-1052 20-226 (226)
148 PRK13637 cbiO cobalt transport 100.0 3.6E-35 7.7E-40 339.4 27.7 218 148-408 20-248 (287)
149 PRK11629 lolD lipoprotein tran 100.0 1.9E-35 4.2E-40 332.4 24.4 200 842-1054 22-229 (233)
150 PRK13637 cbiO cobalt transport 100.0 1.2E-35 2.5E-40 343.4 23.1 201 842-1054 20-229 (287)
151 PRK11264 putative amino-acid A 100.0 1.2E-35 2.7E-40 337.8 23.0 203 841-1054 15-228 (250)
152 cd03224 ABC_TM1139_LivF_branch 100.0 1E-35 2.2E-40 332.4 21.5 200 841-1054 12-216 (222)
153 PRK11248 tauB taurine transpor 100.0 1.6E-35 3.5E-40 336.6 23.5 201 841-1054 13-215 (255)
154 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.3E-35 2.9E-40 335.7 22.7 201 842-1054 14-220 (242)
155 TIGR02673 FtsE cell division A 100.0 1.1E-35 2.5E-40 330.0 21.3 193 842-1045 15-213 (214)
156 KOG0062 ATPase component of AB 100.0 1.4E-35 3.1E-40 340.4 22.5 186 843-1053 378-563 (582)
157 TIGR02315 ABC_phnC phosphonate 100.0 8.6E-36 1.9E-40 337.7 20.4 206 841-1055 14-231 (243)
158 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.2E-35 9.1E-40 326.8 25.4 200 148-392 17-218 (220)
159 cd03258 ABC_MetN_methionine_tr 100.0 3.9E-35 8.4E-40 330.1 25.3 204 149-395 19-228 (233)
160 cd03259 ABC_Carb_Solutes_like 100.0 2.1E-35 4.5E-40 327.6 22.7 200 148-390 13-213 (213)
161 COG1137 YhbG ABC-type (unclass 100.0 2.8E-36 6.1E-41 308.2 14.3 209 147-397 16-228 (243)
162 PRK11831 putative ABC transpor 100.0 2.3E-35 5.1E-40 338.4 23.6 203 841-1054 19-228 (269)
163 cd03235 ABC_Metallic_Cations A 100.0 1.2E-35 2.5E-40 329.6 20.2 200 841-1052 11-213 (213)
164 cd03292 ABC_FtsE_transporter F 100.0 1.7E-35 3.7E-40 328.7 21.3 194 842-1047 14-213 (214)
165 PRK13634 cbiO cobalt transport 100.0 4.1E-35 8.9E-40 339.4 25.3 206 148-396 20-234 (290)
166 COG4988 CydD ABC-type transpor 100.0 1.9E-35 4.2E-40 349.6 22.8 205 149-396 335-542 (559)
167 cd03294 ABC_Pro_Gly_Bertaine T 100.0 4.6E-35 1E-39 335.8 25.4 206 148-396 37-249 (269)
168 PRK13643 cbiO cobalt transport 100.0 6.2E-35 1.4E-39 337.6 26.6 222 149-414 20-253 (288)
169 cd03264 ABC_drug_resistance_li 100.0 1.8E-35 3.9E-40 327.6 21.2 198 841-1052 12-211 (211)
170 PRK10895 lipopolysaccharide AB 100.0 2.1E-35 4.5E-40 334.0 22.1 203 841-1054 15-221 (241)
171 TIGR00960 3a0501s02 Type II (G 100.0 2.8E-35 6.1E-40 327.3 22.6 195 148-386 16-216 (216)
172 cd03265 ABC_DrrA DrrA is the A 100.0 3.2E-35 7E-40 327.7 23.2 205 148-395 13-219 (220)
173 COG4559 ABC-type hemin transpo 100.0 2E-35 4.4E-40 304.6 19.6 206 149-396 15-229 (259)
174 COG4152 ABC-type uncharacteriz 100.0 9.1E-36 2E-40 313.0 17.2 210 833-1055 6-215 (300)
175 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.7E-35 8E-40 330.7 23.5 201 841-1054 13-216 (236)
176 cd03225 ABC_cobalt_CbiO_domain 100.0 1.8E-35 4E-40 327.6 20.6 193 842-1045 14-210 (211)
177 TIGR03740 galliderm_ABC gallid 100.0 4.1E-35 8.9E-40 327.6 23.5 199 841-1056 12-210 (223)
178 cd03262 ABC_HisP_GlnQ_permease 100.0 1.8E-35 3.9E-40 328.2 20.4 196 841-1047 12-212 (213)
179 PRK13634 cbiO cobalt transport 100.0 2.3E-35 5E-40 341.5 22.1 201 842-1054 20-230 (290)
180 PRK13647 cbiO cobalt transport 100.0 2.7E-35 5.9E-40 338.3 22.5 201 842-1054 18-222 (274)
181 TIGR01288 nodI ATP-binding ABC 100.0 3.8E-35 8.2E-40 342.1 24.0 206 148-397 17-224 (303)
182 PRK13650 cbiO cobalt transport 100.0 7.3E-35 1.6E-39 335.7 26.0 204 149-396 21-228 (279)
183 cd03257 ABC_NikE_OppD_transpor 100.0 3.1E-35 6.6E-40 330.0 22.2 200 843-1052 19-228 (228)
184 KOG0058 Peptide exporter, ABC 100.0 3.2E-36 7E-41 361.9 15.0 216 814-1054 463-686 (716)
185 PRK10619 histidine/lysine/argi 100.0 4.4E-35 9.5E-40 334.3 23.7 202 841-1054 17-236 (257)
186 PRK10908 cell division protein 100.0 3.5E-35 7.5E-40 327.9 22.3 196 842-1049 15-216 (222)
187 cd03219 ABC_Mj1267_LivG_branch 100.0 5.1E-35 1.1E-39 329.9 23.8 214 148-395 13-230 (236)
188 cd03296 ABC_CysA_sulfate_impor 100.0 7.6E-35 1.6E-39 328.8 24.9 209 148-395 15-224 (239)
189 PRK13651 cobalt transporter AT 100.0 3.2E-35 6.9E-40 341.3 22.1 201 842-1054 20-249 (305)
190 TIGR00972 3a0107s01c2 phosphat 100.0 4.8E-35 1E-39 332.1 23.0 203 841-1054 13-227 (247)
191 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.8E-35 1E-39 326.0 22.5 195 148-386 17-218 (218)
192 KOG0055 Multidrug/pheromone ex 100.0 1.9E-35 4.1E-40 374.1 21.4 215 141-397 996-1213(1228)
193 PRK15079 oligopeptide ABC tran 100.0 9.7E-35 2.1E-39 340.4 25.9 208 148-396 34-250 (331)
194 PRK11247 ssuB aliphatic sulfon 100.0 3.8E-35 8.3E-40 332.9 21.6 193 842-1054 25-218 (257)
195 PRK11300 livG leucine/isoleuci 100.0 4.5E-35 9.8E-40 334.2 22.3 206 841-1055 17-239 (255)
196 PRK11629 lolD lipoprotein tran 100.0 1.5E-34 3.3E-39 325.1 26.2 201 148-392 22-229 (233)
197 cd03218 ABC_YhbG The ABC trans 100.0 7.8E-35 1.7E-39 327.5 23.7 204 148-395 13-220 (232)
198 PRK13641 cbiO cobalt transport 100.0 5E-35 1.1E-39 338.4 22.7 201 842-1054 20-229 (287)
199 PRK11174 cysteine/glutathione 100.0 4.4E-35 9.6E-40 373.7 24.3 206 149-397 364-572 (588)
200 TIGR02211 LolD_lipo_ex lipopro 100.0 6.5E-35 1.4E-39 325.6 22.6 195 842-1049 18-220 (221)
201 cd03301 ABC_MalK_N The N-termi 100.0 8.3E-35 1.8E-39 322.9 23.2 199 149-390 14-213 (213)
202 TIGR03522 GldA_ABC_ATP gliding 100.0 6.9E-35 1.5E-39 339.3 23.5 205 148-397 15-221 (301)
203 cd03266 ABC_NatA_sodium_export 100.0 8.5E-35 1.8E-39 324.0 23.1 198 149-390 19-218 (218)
204 PRK13636 cbiO cobalt transport 100.0 5.5E-35 1.2E-39 337.4 22.3 201 842-1054 19-226 (283)
205 PRK10070 glycine betaine trans 100.0 6E-35 1.3E-39 347.5 23.2 203 840-1054 39-249 (400)
206 PRK15079 oligopeptide ABC tran 100.0 1.2E-34 2.6E-39 339.6 25.4 204 841-1054 33-246 (331)
207 PRK11614 livF leucine/isoleuci 100.0 4.9E-35 1.1E-39 330.1 21.3 201 841-1055 17-222 (237)
208 PRK09473 oppD oligopeptide tra 100.0 1.6E-34 3.6E-39 338.7 26.4 213 148-396 29-250 (330)
209 PRK13646 cbiO cobalt transport 100.0 5.5E-35 1.2E-39 337.9 21.9 200 842-1054 20-230 (286)
210 PRK13643 cbiO cobalt transport 100.0 6.7E-35 1.5E-39 337.3 22.6 200 843-1054 20-228 (288)
211 PRK13631 cbiO cobalt transport 100.0 6.2E-35 1.3E-39 340.8 22.5 218 816-1054 21-260 (320)
212 PRK10070 glycine betaine trans 100.0 1.1E-34 2.3E-39 345.4 24.8 206 148-396 41-253 (400)
213 TIGR01978 sufC FeS assembly AT 100.0 9.4E-35 2E-39 329.3 23.2 208 841-1054 12-229 (243)
214 cd03263 ABC_subfamily_A The AB 100.0 7E-35 1.5E-39 325.1 21.8 203 148-395 15-219 (220)
215 PRK13631 cbiO cobalt transport 100.0 1.7E-34 3.7E-39 337.1 26.0 216 148-408 39-279 (320)
216 TIGR03005 ectoine_ehuA ectoine 100.0 9.1E-35 2E-39 330.9 23.0 203 841-1054 12-231 (252)
217 COG1245 Predicted ATPase, RNas 100.0 9.8E-34 2.1E-38 319.7 30.9 193 849-1071 361-558 (591)
218 PRK11124 artP arginine transpo 100.0 8.1E-35 1.7E-39 329.4 22.5 202 841-1054 14-225 (242)
219 COG4988 CydD ABC-type transpor 100.0 2.3E-33 5E-38 332.0 35.6 213 813-1054 317-538 (559)
220 PRK13651 cobalt transporter AT 100.0 1.2E-34 2.7E-39 336.3 24.5 205 148-396 20-253 (305)
221 PRK13644 cbiO cobalt transport 100.0 6.6E-35 1.4E-39 335.2 21.8 200 842-1054 15-219 (274)
222 PRK14247 phosphate ABC transpo 100.0 1.2E-34 2.5E-39 329.7 23.5 205 841-1054 15-229 (250)
223 TIGR03411 urea_trans_UrtD urea 100.0 1E-34 2.2E-39 328.6 22.9 204 841-1054 14-226 (242)
224 cd03260 ABC_PstB_phosphate_tra 100.0 7.6E-35 1.6E-39 326.4 21.7 203 149-394 14-226 (227)
225 PRK13548 hmuV hemin importer A 100.0 8.1E-35 1.8E-39 331.8 22.2 202 841-1054 14-225 (258)
226 cd03269 ABC_putative_ATPase Th 100.0 8.8E-35 1.9E-39 321.9 21.9 198 148-390 13-210 (210)
227 cd03233 ABC_PDR_domain1 The pl 100.0 1.6E-34 3.5E-39 317.1 23.7 183 146-390 18-202 (202)
228 cd03224 ABC_TM1139_LivF_branch 100.0 1.2E-34 2.6E-39 323.8 23.0 202 148-395 13-219 (222)
229 PRK13650 cbiO cobalt transport 100.0 6.6E-35 1.4E-39 336.0 21.6 200 842-1054 20-224 (279)
230 TIGR03415 ABC_choXWV_ATP choli 100.0 1E-34 2.3E-39 343.0 23.7 205 839-1055 34-250 (382)
231 PRK13646 cbiO cobalt transport 100.0 1.9E-34 4.1E-39 333.5 25.2 206 148-396 20-234 (286)
232 cd03298 ABC_ThiQ_thiamine_tran 100.0 7.6E-35 1.6E-39 322.6 21.0 194 847-1052 16-211 (211)
233 cd03256 ABC_PhnC_transporter A 100.0 1.4E-34 3E-39 327.4 23.6 213 148-395 14-232 (241)
234 TIGR03415 ABC_choXWV_ATP choli 100.0 1.5E-34 3.2E-39 341.8 24.5 207 147-396 36-253 (382)
235 COG4175 ProV ABC-type proline/ 100.0 3.7E-35 7.9E-40 319.0 17.6 222 148-420 41-269 (386)
236 PRK14267 phosphate ABC transpo 100.0 1.3E-34 2.9E-39 329.9 23.1 209 841-1054 16-232 (253)
237 TIGR01184 ntrCD nitrate transp 100.0 1.1E-34 2.4E-39 325.2 21.7 198 845-1054 1-199 (230)
238 TIGR03410 urea_trans_UrtE urea 100.0 1.1E-34 2.3E-39 325.9 21.5 200 841-1055 12-217 (230)
239 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.9E-34 4.1E-39 326.2 23.6 206 148-396 14-224 (242)
240 PRK13647 cbiO cobalt transport 100.0 2E-34 4.4E-39 331.1 24.2 203 149-395 19-225 (274)
241 PRK14268 phosphate ABC transpo 100.0 1.6E-34 3.5E-39 329.8 23.1 202 841-1054 24-237 (258)
242 PRK11022 dppD dipeptide transp 100.0 4.2E-34 9.2E-39 335.0 27.1 213 148-396 20-242 (326)
243 cd03268 ABC_BcrA_bacitracin_re 100.0 1.5E-34 3.2E-39 319.5 22.0 195 148-390 13-208 (208)
244 PRK11231 fecE iron-dicitrate t 100.0 1E-34 2.3E-39 330.9 21.4 206 841-1055 14-223 (255)
245 PRK13638 cbiO cobalt transport 100.0 1.2E-34 2.7E-39 333.0 22.1 202 841-1054 13-220 (271)
246 PRK13635 cbiO cobalt transport 100.0 1.3E-34 2.9E-39 333.3 22.3 200 842-1054 20-224 (279)
247 PRK09536 btuD corrinoid ABC tr 100.0 1.7E-34 3.7E-39 343.9 23.9 209 148-396 16-227 (402)
248 cd03226 ABC_cobalt_CbiO_domain 100.0 1.2E-34 2.6E-39 319.5 20.9 192 148-387 13-205 (205)
249 COG0444 DppD ABC-type dipeptid 100.0 3.2E-34 6.8E-39 319.1 24.3 215 147-396 17-242 (316)
250 PRK10575 iron-hydroxamate tran 100.0 1.1E-34 2.4E-39 332.2 21.5 206 841-1055 23-233 (265)
251 cd03267 ABC_NatA_like Similar 100.0 2.2E-34 4.8E-39 324.0 23.4 202 839-1052 31-236 (236)
252 PRK13652 cbiO cobalt transport 100.0 1.7E-34 3.7E-39 332.5 22.9 201 842-1054 17-222 (277)
253 PRK13635 cbiO cobalt transport 100.0 4.5E-34 9.7E-39 328.9 26.2 204 149-396 21-228 (279)
254 PRK11831 putative ABC transpor 100.0 2.9E-34 6.3E-39 329.4 24.4 207 148-396 20-232 (269)
255 TIGR02315 ABC_phnC phosphonate 100.0 1.6E-34 3.6E-39 327.2 22.1 213 148-395 15-233 (243)
256 PRK09984 phosphonate/organopho 100.0 1.6E-34 3.4E-39 330.7 22.1 208 841-1055 16-238 (262)
257 PRK14273 phosphate ABC transpo 100.0 1.9E-34 4E-39 328.7 22.5 202 842-1054 20-233 (254)
258 cd03234 ABCG_White The White s 100.0 1.9E-34 4.1E-39 322.8 22.1 206 147-390 19-226 (226)
259 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.7E-34 3.6E-39 374.0 24.8 205 148-397 466-673 (686)
260 PRK14241 phosphate transporter 100.0 2.6E-34 5.6E-39 328.2 23.5 205 841-1054 16-237 (258)
261 TIGR03873 F420-0_ABC_ATP propo 100.0 1.5E-34 3.3E-39 329.7 21.4 206 841-1055 13-222 (256)
262 PRK10253 iron-enterobactin tra 100.0 1.4E-34 3E-39 331.4 21.1 206 841-1055 19-229 (265)
263 cd03233 ABC_PDR_domain1 The pl 100.0 3.2E-34 7E-39 314.7 23.1 196 816-1052 3-202 (202)
264 PRK09493 glnQ glutamine ABC tr 100.0 3E-34 6.5E-39 324.3 23.5 205 148-396 14-224 (240)
265 TIGR03608 L_ocin_972_ABC putat 100.0 1.9E-34 4.2E-39 318.3 21.3 190 841-1042 10-206 (206)
266 cd03257 ABC_NikE_OppD_transpor 100.0 5.7E-34 1.2E-38 319.7 25.4 201 149-390 19-228 (228)
267 PRK13649 cbiO cobalt transport 100.0 2.4E-34 5.1E-39 332.4 22.8 200 842-1054 20-229 (280)
268 cd03232 ABC_PDR_domain2 The pl 100.0 2E-34 4.3E-39 313.9 20.9 173 842-1052 20-192 (192)
269 PRK00349 uvrA excinuclease ABC 100.0 5.7E-33 1.2E-37 357.5 37.9 123 916-1054 791-922 (943)
270 PRK10584 putative ABC transpor 100.0 3.8E-34 8.2E-39 321.0 23.7 195 843-1050 24-226 (228)
271 PRK14245 phosphate ABC transpo 100.0 3.2E-34 6.9E-39 326.0 23.4 207 841-1054 15-229 (250)
272 PRK11308 dppF dipeptide transp 100.0 6.6E-34 1.4E-38 333.2 26.7 207 148-396 28-243 (327)
273 KOG0066 eIF2-interacting prote 100.0 1.4E-33 3.1E-38 313.8 27.6 196 840-1063 598-795 (807)
274 cd03300 ABC_PotA_N PotA is an 100.0 3.6E-34 7.7E-39 321.7 23.2 202 841-1054 12-215 (232)
275 TIGR02211 LolD_lipo_ex lipopro 100.0 5.2E-34 1.1E-38 318.4 24.3 196 148-387 18-220 (221)
276 COG1132 MdlB ABC-type multidru 100.0 1.3E-34 2.8E-39 367.3 21.9 208 148-397 342-552 (567)
277 PRK11264 putative amino-acid A 100.0 4.9E-34 1.1E-38 324.7 24.5 205 149-396 17-232 (250)
278 TIGR02769 nickel_nikE nickel i 100.0 3.1E-34 6.7E-39 328.5 22.9 203 841-1054 23-235 (265)
279 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.1E-34 1.1E-38 321.5 24.3 205 148-396 14-220 (236)
280 TIGR02142 modC_ABC molybdenum 100.0 2.6E-34 5.6E-39 341.3 23.0 194 847-1054 15-216 (354)
281 COG4525 TauB ABC-type taurine 100.0 2.6E-34 5.7E-39 291.8 19.5 206 148-398 18-225 (259)
282 PRK13549 xylose transporter AT 100.0 2.4E-34 5.2E-39 359.4 23.5 209 841-1056 17-229 (506)
283 PRK13639 cbiO cobalt transport 100.0 3.2E-34 7E-39 329.8 22.6 201 842-1054 15-221 (275)
284 cd03264 ABC_drug_resistance_li 100.0 2.8E-34 6E-39 318.1 21.2 196 149-390 14-211 (211)
285 TIGR00968 3a0106s01 sulfate AB 100.0 4E-34 8.7E-39 322.3 22.9 202 841-1054 12-215 (237)
286 PRK13632 cbiO cobalt transport 100.0 7E-34 1.5E-38 326.5 25.2 205 148-396 22-230 (271)
287 COG4181 Predicted ABC-type tra 100.0 1.5E-34 3.3E-39 287.6 16.8 200 838-1050 19-226 (228)
288 cd03297 ABC_ModC_molybdenum_tr 100.0 3.6E-34 7.8E-39 317.9 21.9 197 839-1052 10-214 (214)
289 cd03267 ABC_NatA_like Similar 100.0 6.7E-34 1.4E-38 320.1 24.3 202 146-390 32-236 (236)
290 PRK13547 hmuV hemin importer A 100.0 2.7E-34 5.8E-39 328.7 21.4 209 840-1055 12-240 (272)
291 PRK11308 dppF dipeptide transp 100.0 4.1E-34 8.8E-39 335.0 23.3 203 842-1055 28-240 (327)
292 COG4987 CydC ABC-type transpor 100.0 8.7E-35 1.9E-39 337.5 17.3 202 147-397 350-561 (573)
293 PRK14257 phosphate ABC transpo 100.0 9E-34 1.9E-38 332.0 26.1 211 148-396 95-312 (329)
294 PRK00635 excinuclease ABC subu 100.0 1.2E-32 2.7E-37 366.4 40.2 135 913-1055 759-902 (1809)
295 PRK14269 phosphate ABC transpo 100.0 4.5E-34 9.7E-39 323.9 22.7 208 841-1054 14-225 (246)
296 PRK11144 modC molybdate transp 100.0 3.2E-34 7E-39 339.9 22.4 190 847-1054 16-213 (352)
297 PRK10744 pstB phosphate transp 100.0 6.8E-34 1.5E-38 325.0 24.3 216 815-1054 12-239 (260)
298 PRK14256 phosphate ABC transpo 100.0 8.9E-34 1.9E-38 322.8 25.1 208 841-1054 16-231 (252)
299 PRK13649 cbiO cobalt transport 100.0 1.5E-33 3.3E-38 325.7 27.3 205 148-396 20-233 (280)
300 PRK11022 dppD dipeptide transp 100.0 6.2E-34 1.3E-38 333.6 24.3 207 842-1054 20-238 (326)
301 TIGR01277 thiQ thiamine ABC tr 100.0 4.8E-34 1E-38 316.5 22.1 198 844-1053 13-212 (213)
302 PRK14242 phosphate transporter 100.0 5.5E-34 1.2E-38 324.8 23.2 206 842-1054 19-232 (253)
303 PRK11144 modC molybdate transp 100.0 4.5E-34 9.8E-39 338.6 23.2 195 153-396 16-217 (352)
304 KOG0057 Mitochondrial Fe/S clu 100.0 8.3E-35 1.8E-39 337.7 16.4 211 814-1054 349-569 (591)
305 COG4525 TauB ABC-type taurine 100.0 3E-34 6.6E-39 291.3 18.4 201 842-1055 18-220 (259)
306 PRK13632 cbiO cobalt transport 100.0 3.9E-34 8.5E-39 328.6 21.9 200 842-1054 22-226 (271)
307 cd03299 ABC_ModC_like Archeal 100.0 6.2E-34 1.3E-38 320.3 23.0 199 844-1054 14-214 (235)
308 PRK10895 lipopolysaccharide AB 100.0 6.8E-34 1.5E-38 321.6 23.3 206 148-396 16-225 (241)
309 PRK13645 cbiO cobalt transport 100.0 4.3E-34 9.3E-39 331.4 22.1 200 843-1054 25-235 (289)
310 PRK14235 phosphate transporter 100.0 6.2E-34 1.3E-38 326.2 23.2 220 816-1054 19-246 (267)
311 PRK10771 thiQ thiamine transpo 100.0 3.3E-34 7.2E-39 322.1 20.5 196 847-1054 17-214 (232)
312 PRK09473 oppD oligopeptide tra 100.0 9.3E-34 2E-38 332.3 25.1 208 841-1054 28-246 (330)
313 PRK11176 lipid transporter ATP 100.0 4.6E-34 9.9E-39 364.1 24.4 209 148-397 356-567 (582)
314 PRK13633 cobalt transporter AT 100.0 4.5E-34 9.8E-39 329.5 21.9 200 842-1054 23-228 (280)
315 PRK13633 cobalt transporter AT 100.0 1.5E-33 3.3E-38 325.1 26.1 205 148-396 23-232 (280)
316 cd03292 ABC_FtsE_transporter F 100.0 4.7E-34 1E-38 317.2 21.1 195 148-386 14-214 (214)
317 PRK14273 phosphate ABC transpo 100.0 1.8E-33 3.9E-38 320.7 26.3 206 149-396 21-237 (254)
318 PRK14250 phosphate ABC transpo 100.0 4E-34 8.6E-39 323.1 20.8 197 841-1054 15-216 (241)
319 TIGR02673 FtsE cell division A 100.0 5.4E-34 1.2E-38 316.6 21.5 193 149-385 16-214 (214)
320 PRK13641 cbiO cobalt transport 100.0 5.6E-34 1.2E-38 329.7 22.4 205 148-396 20-233 (287)
321 TIGR03410 urea_trans_UrtE urea 100.0 7.7E-34 1.7E-38 318.9 22.8 202 148-395 13-219 (230)
322 PRK15112 antimicrobial peptide 100.0 5.5E-34 1.2E-38 326.7 21.9 202 842-1054 26-234 (267)
323 TIGR00972 3a0107s01c2 phosphat 100.0 1.1E-33 2.4E-38 321.0 24.2 206 149-396 15-231 (247)
324 COG4618 ArpD ABC-type protease 100.0 4.7E-34 1E-38 327.9 21.1 236 91-399 324-562 (580)
325 PRK13648 cbiO cobalt transport 100.0 6.5E-34 1.4E-38 326.6 22.3 201 842-1055 22-227 (269)
326 PRK10584 putative ABC transpor 100.0 1.8E-33 4E-38 315.4 25.5 197 149-389 24-227 (228)
327 TIGR02770 nickel_nikD nickel i 100.0 6.9E-34 1.5E-38 319.0 22.0 201 844-1054 1-210 (230)
328 PRK11248 tauB taurine transpor 100.0 1.1E-33 2.3E-38 321.6 23.8 200 148-392 14-215 (255)
329 COG4604 CeuD ABC-type enteroch 100.0 5.1E-35 1.1E-39 297.7 11.4 214 833-1056 5-222 (252)
330 PRK14237 phosphate transporter 100.0 1.7E-33 3.6E-38 322.7 25.4 220 815-1054 19-246 (267)
331 PRK14244 phosphate ABC transpo 100.0 8.8E-34 1.9E-38 322.6 22.9 208 841-1054 17-232 (251)
332 PRK13648 cbiO cobalt transport 100.0 2E-33 4.2E-38 322.7 25.9 204 149-396 23-230 (269)
333 PRK10790 putative multidrug tr 100.0 1.1E-33 2.4E-38 360.8 26.4 206 149-397 355-563 (592)
334 PRK11247 ssuB aliphatic sulfon 100.0 8.7E-34 1.9E-38 321.8 22.6 194 149-393 26-219 (257)
335 COG4175 ProV ABC-type proline/ 100.0 2.1E-34 4.5E-39 313.1 16.5 202 842-1055 41-250 (386)
336 PRK13636 cbiO cobalt transport 100.0 8.4E-34 1.8E-38 327.6 22.7 206 149-397 20-231 (283)
337 KOG0056 Heavy metal exporter H 100.0 6.2E-35 1.3E-39 329.2 12.9 209 147-397 550-761 (790)
338 cd03213 ABCG_EPDR ABCG transpo 100.0 6.9E-34 1.5E-38 310.0 20.8 171 842-1052 22-194 (194)
339 PRK15093 antimicrobial peptide 100.0 2.4E-33 5.1E-38 329.9 26.8 217 148-396 20-247 (330)
340 PRK14259 phosphate ABC transpo 100.0 7.4E-34 1.6E-38 325.8 21.9 214 816-1054 13-248 (269)
341 PRK11614 livF leucine/isoleuci 100.0 9.5E-34 2.1E-38 319.6 22.3 202 149-396 19-225 (237)
342 PRK13644 cbiO cobalt transport 100.0 9.1E-34 2E-38 325.7 22.5 203 149-396 16-223 (274)
343 PRK15093 antimicrobial peptide 100.0 1.1E-33 2.3E-38 332.9 23.6 210 841-1054 19-243 (330)
344 PRK10762 D-ribose transporter 100.0 7.2E-34 1.6E-38 354.6 23.2 207 841-1056 16-227 (501)
345 TIGR02770 nickel_nikD nickel i 100.0 1.2E-33 2.5E-38 317.1 22.6 207 150-396 1-214 (230)
346 TIGR01184 ntrCD nitrate transp 100.0 1.2E-33 2.6E-38 316.8 22.5 201 151-394 1-201 (230)
347 TIGR03411 urea_trans_UrtD urea 100.0 1.7E-33 3.8E-38 318.6 24.1 211 148-395 15-229 (242)
348 PRK13640 cbiO cobalt transport 100.0 2.4E-33 5.3E-38 323.5 25.6 207 149-396 21-231 (282)
349 PRK14274 phosphate ABC transpo 100.0 1.2E-33 2.7E-38 322.8 22.9 206 842-1054 25-238 (259)
350 PRK13640 cbiO cobalt transport 100.0 9.2E-34 2E-38 327.0 22.1 202 842-1054 20-227 (282)
351 PRK14270 phosphate ABC transpo 100.0 1.2E-33 2.6E-38 321.5 22.7 203 841-1054 16-230 (251)
352 PRK11160 cysteine/glutathione 100.0 1.2E-33 2.6E-38 357.7 25.1 200 149-397 354-562 (574)
353 TIGR02769 nickel_nikE nickel i 100.0 1.7E-33 3.6E-38 322.5 23.9 207 148-396 24-239 (265)
354 TIGR03740 galliderm_ABC gallid 100.0 1.9E-33 4.1E-38 314.1 23.8 197 148-393 13-209 (223)
355 PRK13645 cbiO cobalt transport 100.0 1.7E-33 3.7E-38 326.4 24.3 205 149-396 25-239 (289)
356 TIGR02142 modC_ABC molybdenum 100.0 1.5E-33 3.3E-38 334.7 24.4 199 153-396 15-220 (354)
357 PRK10908 cell division protein 100.0 1.2E-33 2.6E-38 315.5 22.1 195 149-387 16-216 (222)
358 PRK13548 hmuV hemin importer A 100.0 1.8E-33 3.9E-38 320.8 23.9 206 148-396 15-229 (258)
359 PRK14239 phosphate transporter 100.0 1.4E-33 3E-38 321.4 22.9 206 842-1054 18-231 (252)
360 TIGR00958 3a01208 Conjugate Tr 100.0 6.9E-34 1.5E-38 367.9 23.1 206 148-397 494-702 (711)
361 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.2E-34 9E-39 372.0 21.0 206 148-397 492-700 (710)
362 TIGR03005 ectoine_ehuA ectoine 100.0 1.7E-33 3.7E-38 320.4 23.4 205 149-396 14-235 (252)
363 PRK14247 phosphate ABC transpo 100.0 2.5E-33 5.3E-38 318.8 24.6 212 149-396 17-233 (250)
364 PRK14237 phosphate transporter 100.0 6.5E-33 1.4E-37 317.9 28.1 211 148-396 33-250 (267)
365 cd03225 ABC_cobalt_CbiO_domain 100.0 1.2E-33 2.5E-38 313.2 21.2 194 148-385 14-211 (211)
366 PRK10619 histidine/lysine/argi 100.0 1.7E-33 3.6E-38 321.3 22.9 205 148-396 18-240 (257)
367 TIGR01978 sufC FeS assembly AT 100.0 2.8E-33 6E-38 317.2 24.6 213 148-396 13-233 (243)
368 PRK14240 phosphate transporter 100.0 1.8E-33 3.9E-38 319.9 23.1 206 842-1054 16-229 (250)
369 PRK09700 D-allose transporter 100.0 9.4E-34 2E-38 354.6 22.7 207 841-1056 17-231 (510)
370 PRK11300 livG leucine/isoleuci 100.0 2.7E-33 5.8E-38 319.6 24.5 221 148-396 18-242 (255)
371 PRK14253 phosphate ABC transpo 100.0 1.7E-33 3.8E-38 319.9 22.7 207 841-1054 15-228 (249)
372 PRK13652 cbiO cobalt transport 100.0 2E-33 4.3E-38 323.6 23.4 205 149-396 18-226 (277)
373 PRK14260 phosphate ABC transpo 100.0 1.8E-33 4E-38 321.2 22.9 203 842-1054 20-238 (259)
374 PRK14262 phosphate ABC transpo 100.0 1.9E-33 4.1E-38 319.8 22.9 207 841-1054 15-229 (250)
375 PRK13639 cbiO cobalt transport 100.0 3.2E-33 6.9E-38 321.6 24.9 204 149-396 16-225 (275)
376 PRK13642 cbiO cobalt transport 100.0 2.4E-33 5.1E-38 323.0 23.8 200 842-1054 20-224 (277)
377 TIGR02982 heterocyst_DevA ABC 100.0 1.9E-33 4.1E-38 313.3 22.3 195 842-1048 18-219 (220)
378 cd03235 ABC_Metallic_Cations A 100.0 9E-34 2E-38 314.5 19.6 200 148-390 12-213 (213)
379 TIGR03375 type_I_sec_LssB type 100.0 9.4E-34 2E-38 367.4 22.9 208 148-397 478-688 (694)
380 PRK14268 phosphate ABC transpo 100.0 2.5E-33 5.3E-38 320.0 23.6 204 149-395 26-240 (258)
381 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2.2E-33 4.8E-38 313.2 22.7 199 833-1052 26-224 (224)
382 cd03298 ABC_ThiQ_thiamine_tran 100.0 2E-33 4.3E-38 311.3 22.2 195 153-390 16-211 (211)
383 PRK14263 phosphate ABC transpo 100.0 2.2E-33 4.8E-38 320.2 23.0 207 840-1054 19-240 (261)
384 PRK13642 cbiO cobalt transport 100.0 5.2E-33 1.1E-37 320.2 26.2 205 148-396 20-228 (277)
385 PRK14257 phosphate ABC transpo 100.0 3.2E-33 6.9E-38 327.3 24.8 220 816-1054 80-308 (329)
386 PRK13638 cbiO cobalt transport 100.0 2.9E-33 6.4E-38 321.6 24.0 204 149-396 15-224 (271)
387 PRK10744 pstB phosphate transp 100.0 5.7E-33 1.2E-37 317.3 26.3 210 149-396 27-243 (260)
388 PRK09984 phosphonate/organopho 100.0 1.7E-33 3.8E-38 322.1 21.9 216 148-395 17-240 (262)
389 PRK14250 phosphate ABC transpo 100.0 2.5E-33 5.4E-38 316.7 22.8 200 149-396 17-220 (241)
390 PRK11124 artP arginine transpo 100.0 1.7E-33 3.7E-38 318.6 21.4 203 149-395 16-228 (242)
391 PRK14258 phosphate ABC transpo 100.0 2.9E-33 6.3E-38 319.8 23.6 208 842-1054 20-240 (261)
392 COG4598 HisP ABC-type histidin 100.0 3.7E-34 8E-39 286.4 14.0 213 832-1055 9-237 (256)
393 PRK14272 phosphate ABC transpo 100.0 3E-33 6.6E-38 318.6 23.5 204 841-1054 16-231 (252)
394 cd03300 ABC_PotA_N PotA is an 100.0 4.3E-33 9.4E-38 313.0 24.4 205 149-396 14-219 (232)
395 PRK11701 phnK phosphonate C-P 100.0 2.6E-33 5.6E-38 320.0 22.9 202 842-1054 19-236 (258)
396 PRK14271 phosphate ABC transpo 100.0 5E-33 1.1E-37 319.7 25.5 207 841-1054 33-246 (276)
397 PRK14267 phosphate ABC transpo 100.0 3.4E-33 7.3E-38 318.3 23.9 212 149-396 18-236 (253)
398 TIGR01193 bacteriocin_ABC ABC- 100.0 1.3E-33 2.7E-38 367.1 23.1 207 149-397 488-697 (708)
399 PRK13543 cytochrome c biogenes 100.0 1.8E-33 3.9E-38 312.0 20.9 188 842-1043 24-211 (214)
400 PRK14242 phosphate transporter 100.0 4.8E-33 1E-37 317.0 25.1 210 149-396 20-236 (253)
401 COG0444 DppD ABC-type dipeptid 100.0 3.5E-33 7.6E-38 310.8 22.9 210 841-1055 17-239 (316)
402 cd03231 ABC_CcmA_heme_exporter 100.0 1.3E-33 2.8E-38 309.9 19.4 185 841-1042 12-198 (201)
403 PRK13538 cytochrome c biogenes 100.0 1.4E-33 3.1E-38 310.4 19.6 188 841-1042 13-202 (204)
404 PRK14249 phosphate ABC transpo 100.0 3.2E-33 7E-38 318.0 23.0 207 841-1054 16-230 (251)
405 cd03299 ABC_ModC_like Archeal 100.0 4.7E-33 1E-37 313.2 24.0 204 150-396 14-218 (235)
406 PRK10575 iron-hydroxamate tran 100.0 2.7E-33 5.8E-38 320.8 22.4 208 149-395 25-235 (265)
407 PRK14275 phosphate ABC transpo 100.0 3.2E-33 7E-38 323.0 23.1 203 841-1054 51-265 (286)
408 PRK10418 nikD nickel transport 100.0 3.4E-33 7.4E-38 318.1 22.9 201 842-1054 16-225 (254)
409 PRK11231 fecE iron-dicitrate t 100.0 3.1E-33 6.7E-38 318.8 22.3 208 148-395 15-225 (255)
410 PRK10771 thiQ thiamine transpo 100.0 4.6E-33 1E-37 312.9 23.4 201 153-396 17-218 (232)
411 PRK14236 phosphate transporter 100.0 6.6E-33 1.4E-37 318.7 25.1 206 842-1054 38-251 (272)
412 PRK10253 iron-enterobactin tra 100.0 3.5E-33 7.6E-38 319.8 22.8 210 148-396 20-232 (265)
413 COG4148 ModC ABC-type molybdat 100.0 5.7E-34 1.2E-38 304.5 15.0 195 153-396 16-217 (352)
414 PRK14248 phosphate ABC transpo 100.0 2.9E-33 6.4E-38 321.2 22.1 202 842-1054 34-247 (268)
415 TIGR00630 uvra excinuclease AB 100.0 9E-32 2E-36 345.9 38.0 123 916-1054 789-920 (924)
416 PRK14256 phosphate ABC transpo 100.0 6.8E-33 1.5E-37 315.5 24.7 211 149-396 18-235 (252)
417 PRK15439 autoinducer 2 ABC tra 100.0 2.2E-33 4.7E-38 350.5 22.6 200 841-1056 23-226 (510)
418 PRK14269 phosphate ABC transpo 100.0 6.2E-33 1.3E-37 314.6 24.2 212 148-396 15-229 (246)
419 TIGR02633 xylG D-xylose ABC tr 100.0 3E-33 6.6E-38 349.5 23.8 210 840-1056 12-227 (500)
420 PRK10418 nikD nickel transport 100.0 1.3E-32 2.7E-37 313.4 26.8 206 149-396 17-229 (254)
421 TIGR01277 thiQ thiamine ABC tr 100.0 5.7E-33 1.2E-37 307.9 23.3 199 150-391 13-212 (213)
422 PRK15112 antimicrobial peptide 100.0 4.8E-33 1E-37 318.9 23.4 207 148-396 26-238 (267)
423 PRK10982 galactose/methyl gala 100.0 2.6E-33 5.5E-38 349.1 22.9 208 840-1056 9-220 (491)
424 PRK14261 phosphate ABC transpo 100.0 4.4E-33 9.6E-38 317.2 22.9 207 841-1054 18-232 (253)
425 PRK03695 vitamin B12-transport 100.0 4.1E-33 9E-38 315.9 22.4 197 844-1054 11-217 (248)
426 TIGR03873 F420-0_ABC_ATP propo 100.0 4.9E-33 1.1E-37 317.3 23.0 208 148-395 14-224 (256)
427 TIGR01166 cbiO cobalt transpor 100.0 2.5E-33 5.5E-38 305.1 19.7 179 841-1029 4-188 (190)
428 TIGR00968 3a0106s01 sulfate AB 100.0 7.2E-33 1.6E-37 312.1 24.0 205 149-396 14-219 (237)
429 cd03262 ABC_HisP_GlnQ_permease 100.0 2.3E-33 5.1E-38 311.3 19.8 195 148-386 13-213 (213)
430 PRK10419 nikE nickel transport 100.0 4.4E-33 9.6E-38 319.2 22.6 204 842-1056 25-238 (268)
431 PRK14251 phosphate ABC transpo 100.0 5.3E-33 1.1E-37 316.3 22.9 203 841-1054 16-230 (251)
432 PRK14239 phosphate transporter 100.0 9.8E-33 2.1E-37 314.4 25.1 210 149-396 19-235 (252)
433 PRK11174 cysteine/glutathione 100.0 1.3E-33 2.9E-38 360.1 19.9 209 816-1054 349-567 (588)
434 cd03230 ABC_DR_subfamily_A Thi 100.0 2.5E-33 5.5E-38 300.1 18.9 157 842-1045 13-171 (173)
435 PRK14245 phosphate ABC transpo 100.0 6.8E-33 1.5E-37 315.1 23.4 211 148-396 16-233 (250)
436 PRK14255 phosphate ABC transpo 100.0 6.9E-33 1.5E-37 315.6 23.4 207 841-1054 17-231 (252)
437 PRK14254 phosphate ABC transpo 100.0 5.8E-33 1.3E-37 320.4 23.1 201 841-1054 51-264 (285)
438 PRK14241 phosphate transporter 100.0 7.7E-33 1.7E-37 316.1 23.8 207 149-396 18-241 (258)
439 CHL00131 ycf16 sulfate ABC tra 100.0 7.3E-33 1.6E-37 315.4 23.6 207 842-1054 20-236 (252)
440 PRK14235 phosphate transporter 100.0 7.8E-33 1.7E-37 317.2 23.9 211 149-396 33-250 (267)
441 PRK11288 araG L-arabinose tran 100.0 3.8E-33 8.3E-38 348.2 23.0 204 841-1053 16-223 (501)
442 COG1129 MglA ABC-type sugar tr 100.0 4.9E-33 1.1E-37 329.3 22.6 226 832-1066 11-243 (500)
443 TIGR01193 bacteriocin_ABC ABC- 100.0 1.3E-31 2.8E-36 348.3 38.2 210 816-1054 473-692 (708)
444 PRK14274 phosphate ABC transpo 100.0 7.9E-33 1.7E-37 316.1 23.6 210 149-396 26-242 (259)
445 PRK14244 phosphate ABC transpo 100.0 8.5E-33 1.9E-37 314.5 23.7 212 148-396 18-236 (251)
446 PRK15056 manganese/iron transp 100.0 4E-33 8.7E-38 320.4 21.2 204 842-1055 20-226 (272)
447 PRK14248 phosphate ABC transpo 100.0 2.9E-32 6.3E-37 312.9 28.0 210 149-396 35-251 (268)
448 PRK14238 phosphate transporter 100.0 5.7E-33 1.2E-37 318.8 22.1 205 842-1054 37-250 (271)
449 cd03252 ABCC_Hemolysin The ABC 100.0 8.6E-33 1.9E-37 311.9 23.2 205 148-396 15-224 (237)
450 PRK14270 phosphate ABC transpo 100.0 1.1E-32 2.4E-37 313.5 24.2 210 149-396 18-234 (251)
451 PRK10247 putative ABC transpor 100.0 3.9E-33 8.3E-38 311.8 19.5 197 841-1052 19-220 (225)
452 TIGR01842 type_I_sec_PrtD type 100.0 1.3E-32 2.8E-37 347.0 26.7 208 148-396 331-541 (544)
453 PRK14246 phosphate ABC transpo 100.0 1E-32 2.2E-37 314.1 23.2 205 840-1054 21-236 (257)
454 TIGR02323 CP_lyasePhnK phospho 100.0 7.7E-33 1.7E-37 315.4 22.0 203 841-1054 15-233 (253)
455 PRK14259 phosphate ABC transpo 100.0 1.5E-32 3.3E-37 315.0 24.4 208 149-396 27-252 (269)
456 cd03289 ABCC_CFTR2 The CFTR su 100.0 1E-32 2.2E-37 315.0 22.7 198 149-397 18-225 (275)
457 cd03252 ABCC_Hemolysin The ABC 100.0 2.5E-33 5.4E-38 316.3 17.5 196 842-1054 15-220 (237)
458 PRK13539 cytochrome c biogenes 100.0 3.9E-33 8.5E-38 307.6 18.6 186 841-1043 14-199 (207)
459 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.8E-33 6.2E-38 362.5 20.4 208 816-1054 451-668 (686)
460 COG4181 Predicted ABC-type tra 100.0 1.1E-32 2.3E-37 274.4 19.5 202 143-388 18-226 (228)
461 cd03251 ABCC_MsbA MsbA is an e 100.0 2.1E-33 4.5E-38 316.4 16.3 195 843-1054 16-220 (234)
462 PTZ00265 multidrug resistance 100.0 3.9E-33 8.5E-38 379.4 22.2 213 147-396 1180-1451(1466)
463 PRK14240 phosphate transporter 100.0 1.7E-32 3.6E-37 312.0 23.9 210 149-396 17-233 (250)
464 PRK14265 phosphate ABC transpo 100.0 1.1E-32 2.4E-37 316.8 22.5 218 816-1054 20-253 (274)
465 PRK14271 phosphate ABC transpo 100.0 2.4E-32 5.1E-37 314.1 25.1 211 148-396 34-250 (276)
466 cd03245 ABCC_bacteriocin_expor 100.0 3.7E-33 7.9E-38 311.3 17.8 195 842-1052 17-220 (220)
467 PRK14243 phosphate transporter 100.0 1E-32 2.2E-37 315.7 21.9 205 842-1054 23-243 (264)
468 PRK11701 phnK phosphonate C-P 100.0 1.9E-32 4.2E-37 312.7 24.0 206 149-396 20-240 (258)
469 COG1132 MdlB ABC-type multidru 100.0 2.5E-33 5.5E-38 355.5 18.6 211 815-1054 327-547 (567)
470 PRK09580 sufC cysteine desulfu 100.0 1.4E-32 3E-37 312.5 22.7 208 841-1054 13-230 (248)
471 TIGR01189 ccmA heme ABC export 100.0 6.6E-33 1.4E-37 303.8 19.4 185 840-1041 11-197 (198)
472 cd03297 ABC_ModC_molybdenum_tr 100.0 1.5E-32 3.3E-37 304.8 22.5 192 153-390 16-214 (214)
473 PRK13546 teichoic acids export 100.0 2.8E-32 6.1E-37 310.4 25.0 194 840-1055 35-228 (264)
474 PRK14262 phosphate ABC transpo 100.0 2E-32 4.4E-37 311.4 23.7 210 149-396 17-233 (250)
475 PRK14272 phosphate ABC transpo 100.0 2.4E-32 5.2E-37 311.2 24.3 208 148-396 17-235 (252)
476 PRK14255 phosphate ABC transpo 100.0 5.2E-32 1.1E-36 308.3 26.9 210 148-395 18-234 (252)
477 PRK14266 phosphate ABC transpo 100.0 1.4E-32 3.1E-37 312.6 22.2 207 841-1054 15-229 (250)
478 PRK03695 vitamin B12-transport 100.0 1.8E-32 3.9E-37 310.7 22.9 200 150-395 11-220 (248)
479 PRK14261 phosphate ABC transpo 100.0 2.4E-32 5.3E-37 311.1 24.1 210 149-396 20-236 (253)
480 PRK13547 hmuV hemin importer A 100.0 2E-32 4.2E-37 313.4 23.1 212 148-395 14-242 (272)
481 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.5E-32 3.2E-37 310.2 21.9 206 148-397 16-226 (238)
482 PRK14263 phosphate ABC transpo 100.0 2.1E-32 4.6E-37 312.1 23.3 209 148-396 21-244 (261)
483 TIGR02203 MsbA_lipidA lipid A 100.0 1E-32 2.2E-37 351.4 23.0 208 148-396 345-555 (571)
484 cd03229 ABC_Class3 This class 100.0 5.7E-33 1.2E-37 298.8 17.3 160 841-1045 12-177 (178)
485 cd03289 ABCC_CFTR2 The CFTR su 100.0 7.2E-33 1.6E-37 316.2 19.1 196 842-1055 17-221 (275)
486 PRK13545 tagH teichoic acids e 100.0 2.2E-32 4.8E-37 327.0 23.9 192 842-1055 37-228 (549)
487 cd03213 ABCG_EPDR ABCG transpo 100.0 3.9E-32 8.5E-37 296.2 23.8 170 148-390 22-194 (194)
488 PRK14251 phosphate ABC transpo 100.0 2.9E-32 6.2E-37 310.3 23.6 210 149-396 18-234 (251)
489 PRK14249 phosphate ABC transpo 100.0 4.1E-32 8.8E-37 308.9 24.7 210 149-396 18-234 (251)
490 TIGR03771 anch_rpt_ABC anchore 100.0 1.6E-32 3.5E-37 306.2 20.8 194 850-1055 1-197 (223)
491 PRK14264 phosphate ABC transpo 100.0 2.3E-32 4.9E-37 318.6 22.9 208 842-1054 58-284 (305)
492 PRK14260 phosphate ABC transpo 100.0 2.8E-32 6E-37 311.5 23.1 206 149-396 21-242 (259)
493 TIGR01846 type_I_sec_HlyB type 100.0 1.2E-32 2.5E-37 357.0 22.5 207 149-397 471-680 (694)
494 PRK14253 phosphate ABC transpo 100.0 2.8E-32 6E-37 310.0 22.8 210 148-395 16-231 (249)
495 PRK14265 phosphate ABC transpo 100.0 4.5E-32 9.7E-37 311.7 24.7 208 149-396 34-257 (274)
496 TIGR02982 heterocyst_DevA ABC 100.0 5E-32 1.1E-36 302.0 24.3 196 148-386 18-219 (220)
497 COG1123 ATPase components of v 100.0 2.1E-32 4.6E-37 325.8 22.6 210 146-396 302-518 (539)
498 cd03245 ABCC_bacteriocin_expor 100.0 2.4E-32 5.2E-37 304.8 21.7 194 148-390 17-220 (220)
499 PRK10419 nikE nickel transport 100.0 3.6E-32 7.8E-37 311.7 23.7 207 148-396 25-240 (268)
500 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 5.4E-33 1.2E-37 313.7 16.6 196 842-1054 16-221 (238)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.9e-255 Score=2347.25 Aligned_cols=1343 Identities=50% Similarity=0.860 Sum_probs=1260.6
Q ss_pred cchhHhhhHHHhhcCCChhhhhhcccccc-CCCceeeeccccChHhhHHHHHHHhhcccCChHHHHHHHHHHHHhcCCCC
Q 000562 19 VEDEEALRWAALERLPTYARARRGIFKNV-VGDVKEVDVSELAVQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLEL 97 (1419)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (1419)
|||||+|+|||+|||||++| ++..+. ++ ++|+.++++.+++...++..+..++|+|+++.++|+|++++ ++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~ 83 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFES---EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--EL 83 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhccC---cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cC
Confidence 45999999999999999999 555432 22 79999999999999999999999999999999999999988 89
Q ss_pred CCcEEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcceeeeecceEeEeCCeEEEEEcCCCCcHHHH
Q 000562 98 PKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTL 177 (1419)
Q Consensus 98 ~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTL 177 (1419)
|.++++++++.+++++..| ||+.|...+..+.+++..+.. ++.+.+||+|+||.++||||++++||||||||||
T Consensus 84 p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttl 157 (1391)
T KOG0065|consen 84 PTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTL 157 (1391)
T ss_pred CceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHH
Confidence 9999999999999999876 999999999998877665543 5566789999999999999999999999999999
Q ss_pred HHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhC
Q 000562 178 LLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAG 257 (1419)
Q Consensus 178 L~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~ 257 (1419)
|++|+|.++......|+|+|||++.+++.+++.++|++|+|+|+|+|||||||+|+++|++++.+++ +..|+|++.
T Consensus 158 lkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~- 233 (1391)
T KOG0065|consen 158 LKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA- 233 (1391)
T ss_pred HHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH-
Confidence 9999999988777789999999999999999999999999999999999999999999999999988 556666542
Q ss_pred CCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCC
Q 000562 258 IKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGL 337 (1419)
Q Consensus 258 ~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgL 337 (1419)
..+|++++++||++|+||+|||+++||+||||||||+||+++++++++++|||+|+||
T Consensus 234 ----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GL 291 (1391)
T KOG0065|consen 234 ----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGL 291 (1391)
T ss_pred ----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeecccccc
Confidence 2689999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHH
Q 000562 338 DSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQ 417 (1419)
Q Consensus 338 Ds~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~ 417 (1419)
|++|+.+++++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||++
T Consensus 292 DSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt 371 (1391)
T KOG0065|consen 292 DSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLT 371 (1391)
T ss_pred cHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhcCccccccCCcccccCCCCCCchHHHHHHHHHHHHH
Q 000562 418 EVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLL 497 (1419)
Q Consensus 418 ~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~ 497 (1419)
+++++++++++|..+..|+.+.++++|.+.|.+++.++++..+++.++++.+.|+.++..++|.++.|+|++.|..|+++
T Consensus 372 ~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~ 451 (1391)
T KOG0065|consen 372 EVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFL 451 (1391)
T ss_pred HhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccc
Q 000562 498 LMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHF 577 (1419)
Q Consensus 498 ~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~ 577 (1419)
+++||.+++++++++.+++|+++|++|+++.+ .+..++..+.|++||++++.++++++++.++++++||++|||+..|
T Consensus 452 l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~f 529 (1391)
T KOG0065|consen 452 LMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSF 529 (1391)
T ss_pred HHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhcccc
Confidence 99999999999999999999999999999985 5566778899999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Q 000562 578 YPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFA 657 (1419)
Q Consensus 578 y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~ 657 (1419)
||+|+++++++++++|+.+++.++|.+|+||++|+.+++++||++++++++.+++++++||+++++++++.+|+++|++.
T Consensus 530 Y~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~ 609 (1391)
T KOG0065|consen 530 YPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGIL 609 (1391)
T ss_pred cChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCcccccC------------CC---CCccchHHHhhh
Q 000562 658 MLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKA------------GN---SNFSLGEAILRQ 722 (1419)
Q Consensus 658 ~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~nef~~~~~~~~~------------~~---~~~~~g~~~l~~ 722 (1419)
++++.+++||+|++.+||+||+|++|++|++|+++++++|||++.+|.|.+ .. ...+.|..+++.
T Consensus 610 ~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g 689 (1391)
T KOG0065|consen 610 LLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSG 689 (1391)
T ss_pred HHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEec
Confidence 999999999999999999999999999999999999999999999999972 11 135778899998
Q ss_pred cCCC-----CCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHHhhh-cCchhhHHHHHhhhccc
Q 000562 723 RSLF-----PESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRR-KGENVVIELREYLQRSS 796 (1419)
Q Consensus 723 ~~~~-----~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 796 (1419)
+++. +..+|+|+++|+++||+++|++++.+++.|+++.++.+..+..++..++.... .......+. ..
T Consensus 690 ~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------~~ 763 (1391)
T KOG0065|consen 690 RDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAGSSSEIEK------LD 763 (1391)
T ss_pred ccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhccccccccc------cc
Confidence 8887 78899999999999999999999999999999998888877765544332111 000000000 00
Q ss_pred cccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHh
Q 000562 797 SLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLA 876 (1419)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~ 876 (1419)
+... .+.++++.|+.+..++++|+.|.++++.+++..| +++++|+||||.++||.++||||+||||||||||+||
T Consensus 764 ~s~~--~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA 838 (1391)
T KOG0065|consen 764 DSSH--QEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLA 838 (1391)
T ss_pred cccc--cccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHh
Confidence 0000 1345778899999999999999999999988766 6789999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccc
Q 000562 877 GRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL 956 (1419)
Q Consensus 877 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~ 956 (1419)
||+++|.++|+|.|||+|.+++.++|.+|||+|+|+|.+.+||||+|.|+|+||+|.+++.+++.++||+|++.+||.++
T Consensus 839 ~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~ 918 (1391)
T KOG0065|consen 839 GRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY 918 (1391)
T ss_pred cCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh
Confidence 99999999999999999999899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCHHHHHHHHHHHHHhhCC-CcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHh
Q 000562 957 SGALIGLPGINGLSTEQRKRLTIAVELVANP-SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES 1035 (1419)
Q Consensus 957 ~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p-~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~ 1035 (1419)
+|.+||.|| +|||++|||||+||+||++|| .||||||||||||++++..|++++|+++++|+|||||+||||.++++.
T Consensus 919 ~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~ 997 (1391)
T KOG0065|consen 919 ADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEA 997 (1391)
T ss_pred hhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHH
Confidence 999999999 899999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred cCeEEEEecCCEEEEeCCCCCchhHHHHHHHhcCCCCCCCCCCCCccccccccChhhhhcccchHHHHHHhcHHHHHHHH
Q 000562 1036 FDELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSPVEESRLGVDFAEIYRRSNLFQRNRE 1115 (1419)
Q Consensus 1036 ~D~v~~l~~gG~~~~~G~~~~~~~~~~~~f~~~~g~~~~~~~~npA~~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 1115 (1419)
||++++|++||++||+||+|++++.+++||++++|++ ||+..|||||||||++.+.+.+.+.||++.|++|++++++++
T Consensus 998 FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~e 1076 (1391)
T KOG0065|consen 998 FDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNKE 1076 (1391)
T ss_pred HhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHHHhccHHHHHHHH
Confidence 9999999999999999999999999999999998885 666669999999999999988889999999999999999999
Q ss_pred HHHhhCCCCCC-CcCCCCCCccCchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHH
Q 000562 1116 LVESLSKPSPS-SKKLNFSTKYSQSFANQFLACLRKQNLSYWRNPQYTAVRFFYTVVISLMLGSICWKFGAKRENQQDLF 1194 (1419)
Q Consensus 1116 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~al~~G~~f~~~~~~~~~~~~~~ 1194 (1419)
++++++.|+++ +.+..++++|++|+|.|++.|+|||+++|||+|+|+.+|++++++.||++|++||++|+ ++||++
T Consensus 1077 ~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~lq 1153 (1391)
T KOG0065|consen 1077 LVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGLQ 1153 (1391)
T ss_pred HHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHHH
Confidence 99999999998 88888999999999999999999999999999999999999999999999999999995 789999
Q ss_pred HHHhHHHHHHHHHHHHHhhhhhhhhhhhhhhHhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHH
Q 000562 1195 NAMGSMYVAVLFIGITNASAVQPVVSVERYVSYRERAAGMYSALPFAFAQVVIEFPYVFGQALIYCSIFYSMASFEWTAV 1274 (1419)
Q Consensus 1195 ~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~ 1274 (1419)
|.+|++|+++++.+.+++...+|.+..||.++|||+++||||+.||++||+++|+||.++++++|.+|+|+|+||++++.
T Consensus 1154 n~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a~ 1233 (1391)
T KOG0065|consen 1154 NAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTAS 1233 (1391)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhHH
Confidence 99999999999999999888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccccCCCCccchhhhhhhhCHHHHHHHHHHHH
Q 000562 1275 KFISYIFFMYFTMLYFTFYGMMTTAITPNHNVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTS 1354 (1419)
Q Consensus 1275 ~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~ 1354 (1419)
+|+||++++++..+|++++|||+.+++||.++|+++++++++++++||||++|++.||+||+||||+||++|.++|++..
T Consensus 1234 ~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~~ 1313 (1391)
T KOG0065|consen 1234 KFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLISS 1313 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCcccccccC-----CCCCcCHHHHHHHhhC----CCccchhHHHHHHHHHHHHHHHHHHHHHHhccccCC
Q 000562 1355 QFGDDDKLVKLSD-----GTGSVPVKHLLKDVFG----FRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 1419 (1419)
Q Consensus 1355 ~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~g----~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1419 (1419)
++||.+..|...+ ++++.||++|++++|| |.++.......+.++|.+++.+++.+++|+.|+|||
T Consensus 1314 ~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1314 QLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVADAFLAAFNIKYLNFWRN 1387 (1391)
T ss_pred HhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehHHHHHHHHHHHHHHHHHh
Confidence 9999987774333 3357899999999999 999999988889999999999999999999999987
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.5e-237 Score=2352.85 Aligned_cols=1415 Identities=59% Similarity=1.016 Sum_probs=1276.6
Q ss_pred cccccccCCCC-C---CCcchhHhhhHHHhhcCCChhhhhhcccccc-----CCC---ceeeeccccChHhhHHHHHHHh
Q 000562 5 AENVFSRTSSF-R---DEVEDEEALRWAALERLPTYARARRGIFKNV-----VGD---VKEVDVSELAVQEQRLVLDRLV 72 (1419)
Q Consensus 5 ~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~ 72 (1419)
.+++|++.+.+ + ..|||||+|+|||+||||||+|+|++++.+. .|+ .+|+|+++|+.++++.++++|+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (1470)
T PLN03140 23 MEDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQKFIDMVF 102 (1470)
T ss_pred hhhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHHHHHhhh
Confidence 45788764323 2 3678999999999999999999999999653 122 2369999999999999999999
Q ss_pred hcccCChHHHHHHHHHHHHhcCCCCCCcEEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcceeeee
Q 000562 73 NAVEDDPERFFDRMRKRCEAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILD 152 (1419)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~ 152 (1419)
+++++|+++|++++++|.|++|+++|++||||+||+|++++.++++.+||++|.+.+.++.+...++....++.+++||+
T Consensus 103 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~ 182 (1470)
T PLN03140 103 KVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILK 182 (1470)
T ss_pred cccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceecc
Confidence 99999999999999999999999999999999999999999999999999999999988876654443234445688999
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHHHHHHH
Q 000562 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDF 232 (1419)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f 232 (1419)
|||+.++|||+++|+||||||||||||+|+|+++++..++|+|+|||+++++..+++.++||+|+|.|++++||+|||.|
T Consensus 183 ~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f 262 (1470)
T PLN03140 183 DASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDF 262 (1470)
T ss_pred CCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHH
Confidence 99999999999999999999999999999999988767899999999999877777889999999999999999999999
Q ss_pred hhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCChHHh
Q 000562 233 AGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQK 312 (1419)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqk 312 (1419)
+++|++++.+++...+..++|++.++.|+.++|.+||+...++.+.+..++++|+.+||++|+||.||++++++||||||
T Consensus 263 ~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGer 342 (1470)
T PLN03140 263 SARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQK 342 (1470)
T ss_pred HHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccc
Confidence 99998877666665566677888788888899999999988888888889999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcCh
Q 000562 313 KRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPR 392 (1419)
Q Consensus 313 kRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~ 392 (1419)
|||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|+++|+||+
T Consensus 343 kRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~ 422 (1470)
T PLN03140 343 KRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPR 422 (1470)
T ss_pred eeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCH
Confidence 99999999999999999999999999999999999999998866788899999999999999999999999999999999
Q ss_pred hhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhcCccccccCCc
Q 000562 393 VSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHP 472 (1419)
Q Consensus 393 ~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 472 (1419)
+++.+||+++||+||+++|+|||+++++++++++++|.....|++++++++++++|++++.++.+.+++..+.++...++
T Consensus 423 ~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 502 (1470)
T PLN03140 423 DHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHK 502 (1470)
T ss_pred HHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhccc
Confidence 99999999999999999999999999999988878887766788888999999999999998888888777766665666
Q ss_pred ccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccccchhhHHHHHHHHHHH
Q 000562 473 AALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIIL 552 (1419)
Q Consensus 473 ~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~ 552 (1419)
.....++|..++++|++.|++|++++++||+..+++++++.+++|+++|++||+++++.....++..+.|++||++++.+
T Consensus 503 ~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~ 582 (1470)
T PLN03140 503 AALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINM 582 (1470)
T ss_pred ccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 66666789999999999999999999999999999999999999999999999998766555667788999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchHHHHHHHHHHHHHHHH
Q 000562 553 FNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQM 632 (1419)
Q Consensus 553 ~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~~~l~~~~~~~~ 632 (1419)
++++.++..++.+||||+|||+.+||++|+|++++++.++|+.++++++|++|+|||+|+.+++++||.+++++++.+++
T Consensus 583 ~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~ 662 (1470)
T PLN03140 583 FNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQM 662 (1470)
T ss_pred HHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCcccccC-CCC
Q 000562 633 SIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKA-GNS 711 (1419)
Q Consensus 633 ~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~nef~~~~~~~~~-~~~ 711 (1419)
+.++|++++++++++.+|+++++++++++++++||++++++||+||+|++|+||+.|+++++++|||.+.+|.+.. .+.
T Consensus 663 ~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~ 742 (1470)
T PLN03140 663 AAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDN 742 (1470)
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998886532 233
Q ss_pred CccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHHhhhcC-------ch-
Q 000562 712 NFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKG-------EN- 783 (1419)
Q Consensus 712 ~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~- 783 (1419)
....|..+|+.+++...+.|+|+++|++++|+++|+++++++++|.++.........++..+........ ++
T Consensus 743 ~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (1470)
T PLN03140 743 STRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLSSADG 822 (1470)
T ss_pred CcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhccccccccccccccc
Confidence 4678999999999999889999999999999999999999999999876655544332211110000000 00
Q ss_pred hh---HHH--HHhhhc-----cccc--cccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeE
Q 000562 784 VV---IEL--REYLQR-----SSSL--NGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGA 851 (1419)
Q Consensus 784 ~~---~~~--~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~ 851 (1419)
.. ... +..... .... .....+.+++.+|+.|.+++|+|++|.++.+.+.++.+...+++.+|+|||++
T Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~ 902 (1470)
T PLN03140 823 NNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGA 902 (1470)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEE
Confidence 00 000 000000 0000 00012334567788999999999999999887776666666777899999999
Q ss_pred EeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHHHHHHHhhhcC
Q 000562 852 FRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRL 931 (1419)
Q Consensus 852 i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~ 931 (1419)
++|||++||||||||||||||++|+|+.++|..+|+|.+||.+..+..+++.+|||+|+|.+++.+||+|+|.|++.+|.
T Consensus 903 i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~ 982 (1470)
T PLN03140 903 FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRL 982 (1470)
T ss_pred EECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCC
Confidence 99999999999999999999999999987667899999999987655567789999999999999999999999998888
Q ss_pred CCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHH
Q 000562 932 PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTV 1011 (1419)
Q Consensus 932 ~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l 1011 (1419)
+...+.+++.+.++++++.++|.+++|+.+|.+++++|||||||||+||++|+.+|+||||||||||||+.++..+++.|
T Consensus 983 ~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L 1062 (1470)
T PLN03140 983 PKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV 1062 (1470)
T ss_pred CCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHH
Confidence 76666666778899999999999999999998888899999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCCchhHHHHHHHhcCCCCCCCCCCCCccccccccChh
Q 000562 1012 RNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSPV 1091 (1419)
Q Consensus 1012 ~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~~f~~~~g~~~~~~~~npA~~~l~v~~~~ 1091 (1419)
++++++|+|||||+|||+.++++.||++++|++||+++|+||.+++++++++||++++|+++||+++||||||+|+++.+
T Consensus 1063 ~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~ 1142 (1470)
T PLN03140 1063 RNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLA 1142 (1470)
T ss_pred HHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhccc
Confidence 99998899999999999977899999999999889999999999999999999999988888999999999999999877
Q ss_pred hhhcccchHHHHHHhcHHHHHHHHHHHhhCCCCCCCcCCCCCCccCchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHH
Q 000562 1092 EESRLGVDFAEIYRRSNLFQRNRELVESLSKPSPSSKKLNFSTKYSQSFANQFLACLRKQNLSYWRNPQYTAVRFFYTVV 1171 (1419)
Q Consensus 1092 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~ 1171 (1419)
.+.+.+.||++.|++|++++++++++++++.++++.++..++++|++++|+|+++|+||+++++||||.|+++|++++++
T Consensus 1143 ~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~ 1222 (1470)
T PLN03140 1143 AEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLA 1222 (1470)
T ss_pred ccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHH
Confidence 66666679999999999999998888888777666666666788999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCCCHHhHHHHHhHHHHHHHHHHHHHhhhhhhhhhhhhhhHhhhccCCCCChHHHHHHHHHHHHHH
Q 000562 1172 ISLMLGSICWKFGAKRENQQDLFNAMGSMYVAVLFIGITNASAVQPVVSVERYVSYRERAAGMYSALPFAFAQVVIEFPY 1251 (1419)
Q Consensus 1172 ~al~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~l~e~P~ 1251 (1419)
+|+++|++||+++++..+++++++++|++|++++|+++.++++++|.+..||+||+|||++|+|++++|++|++++|+||
T Consensus 1223 ~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~ 1302 (1470)
T PLN03140 1223 AALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPY 1302 (1470)
T ss_pred HHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHH
Confidence 99999999999998877889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccccCCCCc
Q 000562 1252 VFGQALIYCSIFYSMASFEWTAVKFISYIFFMYFTMLYFTFYGMMTTAITPNHNVAAIIAAPCYMLWNLFSGFMIAHKRI 1331 (1419)
Q Consensus 1252 ~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~i 1331 (1419)
.++++++|++|+|||+||++++.+||||+++++++.++++++|+++++++||.++|+++++++++++++||||++|+++|
T Consensus 1303 ~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~i 1382 (1470)
T PLN03140 1303 VLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKI 1382 (1470)
T ss_pred HHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccChHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhhCHHHHHHHHHHHHhhCCCcccccccCCCCCcCHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 000562 1332 PIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAI 1411 (1419)
Q Consensus 1332 p~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l 1411 (1419)
|+||+|+||+||++|+++|+++|||+|.+..+.+|+..+..++++|++++|||+++++|++++++++|+++|++++++++
T Consensus 1383 P~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~~ 1462 (1470)
T PLN03140 1383 PKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVFFAFIFAFCI 1462 (1470)
T ss_pred chHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877777643346899999999999999999999999999999999999999
Q ss_pred HhccccCC
Q 000562 1412 KAFKFQKR 1419 (1419)
Q Consensus 1412 ~~~~~~~r 1419 (1419)
|++|||||
T Consensus 1463 ~~~~~q~r 1470 (1470)
T PLN03140 1463 RTLNFQTR 1470 (1470)
T ss_pred HHhhcccC
Confidence 99999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=7.1e-186 Score=1866.74 Aligned_cols=1286 Identities=30% Similarity=0.500 Sum_probs=1062.3
Q ss_pred CChHHHHHHHHHHHHhcCCCCC--CcEEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcceeeeecc
Q 000562 77 DDPERFFDRMRKRCEAVDLELP--KIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDL 154 (1419)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 154 (1419)
.|++++++.++++.++.+...| +++|+|+||+|++ ...+...+||++|.+.+........+. ..+++.+++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 5677888776666666666555 9999999999999 444666789999998887664433321 12334567899999
Q ss_pred eEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC-CCeeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCCHHHHHH
Q 000562 155 SGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMTVRETLD 231 (1419)
Q Consensus 155 s~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1419)
|+.++|||+++|+||||||||||||+|+|+..+. .+.+|+|.+||+++++.. .++.++||+|+|.|++++||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 9999999999999999999999999999997432 246999999999875432 3456999999999999999999999
Q ss_pred HhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCChHH
Q 000562 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1419)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1419)
|+++++.+....+.. .+.++ .+..++.+++.+||++++||.||++.+++|||||
T Consensus 161 f~~~~~~~~~~~~~~---~~~~~-----------------------~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPDGV---SREEY-----------------------AKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCCCC---CHHHH-----------------------HHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 998876432211000 00000 1123567899999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcC
Q 000562 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGP 391 (1419)
Q Consensus 312 kkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~ 391 (1419)
||||+||++|+.+|++++|||||||||+.++.++++.|+++++..+.|+|+++|||+++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999876677888888999999999999999999999999999
Q ss_pred hhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhcCccccc---
Q 000562 392 RVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRR--- 468 (1419)
Q Consensus 392 ~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--- 468 (1419)
++++.+||+++||.||++.|+|||+++++++.++ +++.. .+.....++++++++|+++..++.+.++++.+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~-~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPG-YEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hcccc-ccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999987543 22211 111223578899999999887776665544321110
Q ss_pred ------------cCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccc
Q 000562 469 ------------FNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDD 536 (1419)
Q Consensus 469 ------------~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~ 536 (1419)
...+.....++|..+++.|++.|.+|+++..+||+..+..++++.+++|+++|++|++.+.+.. +
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~~---~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNTS---D 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCch---h
Confidence 0011122345688899999999999999999999999999999999999999999999876443 4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccch
Q 000562 537 GGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNV 616 (1419)
Q Consensus 537 ~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~ 616 (1419)
.+.+.|++|+++++.++.++.++..++.+|++|+|||..++|++++|++++++.++|+.++.+++|++|+|||+|+.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 46679999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHH
Q 000562 617 VRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASV 696 (1419)
Q Consensus 617 ~rf~~~~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~ 696 (1419)
.+||.+++++++...++.+++++++++++++.+|+.+++++++++++++||+++.++||+||+|++|+||+.|+++++++
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCcccccC--C----------------------CCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 000562 697 NEFLGHSWDKKA--G----------------------NSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTF 752 (1419)
Q Consensus 697 nef~~~~~~~~~--~----------------------~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~ 752 (1419)
|||.+..+.|.. | +.....|+++|+. .+.....|+|.++|++++++++|.++.++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999998887741 1 0123478888885 34445568999999999999999999999
Q ss_pred HHHhcCCCCCcccccchhhhhh---HHhhhcCchhhHHHHHhhhcccccccccccc-CCcc-cc--cccceeEeccceee
Q 000562 753 FLSYLNPLGKQQAVVSKKELQE---RDRRRKGENVVIELREYLQRSSSLNGKYFKQ-KGMV-LP--FQPLSMAFGNINYF 825 (1419)
Q Consensus 753 ~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~--~~~~~~~~~~~~~~ 825 (1419)
+++|.++..........++... .......+......+...+..........+. ...+ .+ .....+.|+|++|.
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nl~~~ 768 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFHWRNLTYE 768 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccccccccccccccCCCceEEEEeeEEE
Confidence 9999885544322211111000 0000000000000000000000000000000 0000 00 11234678888877
Q ss_pred eecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc-eEEEEEEECCccCCcccccceE
Q 000562 826 VDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQETFARIS 904 (1419)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~ 904 (1419)
++.. .+++.+|+|||++++|||++||||||||||||||++|+|+.+.+ +.+|+|.+||++... .+++.+
T Consensus 769 ~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i 838 (1394)
T TIGR00956 769 VKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSI 838 (1394)
T ss_pred ecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcce
Confidence 6321 23467999999999999999999999999999999999997644 457999999998753 467889
Q ss_pred EEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHh
Q 000562 905 GYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV 984 (1419)
Q Consensus 905 gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~ 984 (1419)
|||+|+|.+++.+||+|+|.|++.+|.|...+.+++.++++++++.++|.+++|+.+|.++. +|||||||||+||+||+
T Consensus 839 ~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl~Ia~aL~ 917 (1394)
T TIGR00956 839 GYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRLTIGVELV 917 (1394)
T ss_pred eeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHHHHHHHHH
Confidence 99999999999999999999999998876666667778899999999999999999987654 89999999999999999
Q ss_pred hCCC-cceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCCchhHHHH
Q 000562 985 ANPS-IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIK 1063 (1419)
Q Consensus 985 ~~p~-illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~ 1063 (1419)
.+|+ ||||||||||||+.++..|++.|++++++|+|||+|+|||+..+++.||++++|++||+++|+|+.+++++++++
T Consensus 918 ~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~~ 997 (1394)
T TIGR00956 918 AKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTIIN 997 (1394)
T ss_pred cCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHHH
Confidence 9997 999999999999999999999999999889999999999997678899999999988899999999988899999
Q ss_pred HHHhcCCCCCCCCCCCCccccccccChhhhhcccchHHHHHHhcHHHHHHHHHHHhhCCCCCCCc---CCCCCCccCchh
Q 000562 1064 YFEAVEGVPKIRPGYNPAAWMLEVTSPVEESRLGVDFAEIYRRSNLFQRNRELVESLSKPSPSSK---KLNFSTKYSQSF 1140 (1419)
Q Consensus 1064 ~f~~~~g~~~~~~~~npA~~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 1140 (1419)
||+++ |+++||+++|||||++|+++.+.+.....||.+.|++|+++++..+.+++...+..... +....++|+.|+
T Consensus 998 yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 1076 (1394)
T TIGR00956 998 YFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALSKYAASL 1076 (1394)
T ss_pred HHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccccccCCCH
Confidence 99998 76689999999999999998755444456899999999998877666655443221111 111224689999
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHhHHHHHHHHHHHHHhhhhhhhhh
Q 000562 1141 ANQFLACLRKQNLSYWRNPQYTAVRFFYTVVISLMLGSICWKFGAKRENQQDLFNAMGSMYVAVLFIGITNASAVQPVVS 1220 (1419)
Q Consensus 1141 ~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~al~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~ 1220 (1419)
|+|+++|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+++++.++.+ .+++|.+.
T Consensus 1077 ~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~~-~~~~~~f~ 1152 (1394)
T TIGR00956 1077 WYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPLI-QQYLPPFV 1152 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHHH-HHhhhhHH
Confidence 999999999999999999999999999999999999999999986 57899999999999888877763 45667788
Q ss_pred hhhhhH-hhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHH-------HHHHHHHHHHHHHHHHH
Q 000562 1221 VERYVS-YRERAAGMYSALPFAFAQVVIEFPYVFGQALIYCSIFYSMASFEWTAVK-------FISYIFFMYFTMLYFTF 1292 (1419)
Q Consensus 1221 ~er~v~-~rE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~-------f~~~~~~~~~~~~~~~~ 1292 (1419)
.||.+| +|||++|+|++.+|++|++++|+|+.++.+++|++|+|||+||++++.+ |++|+++++++.+++++
T Consensus 1153 ~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~~~~~~~s 1232 (1394)
T TIGR00956 1153 AQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTMFFLYFST 1232 (1394)
T ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHHHHHHHHH
Confidence 888886 8999999999999999999999999999999999999999999988866 99999999999999999
Q ss_pred HHHHHHhccCCHHHHHHHHHHHHHHHHHhhccccCCCCccchhhhhhhhCHHHHHHHHHHHHhhCCCcccccc-------
Q 000562 1293 YGMMTTAITPNHNVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKL------- 1365 (1419)
Q Consensus 1293 ~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~~------- 1365 (1419)
+|+++++++||.++|+.+++++++++++||||++|+++||+||+|+||+||++|+++|++.|||+|.+..|..
T Consensus 1233 ~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~~e~~~f~ 1312 (1394)
T TIGR00956 1233 LGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKVKELLTFN 1312 (1394)
T ss_pred HHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCccccceec
Confidence 9999999999999999999999999999999999999999999999999999999999999999998644311
Q ss_pred -c-----------------------CCC--C----CcCHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 000562 1366 -S-----------------------DGT--G----SVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAF 1414 (1419)
Q Consensus 1366 -~-----------------------~~~--~----~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~ 1414 (1419)
| +.. | ..++.+|++ .+|+++++.|++++++++|++++ +++++++.+.
T Consensus 1313 pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~-~~~~~~~~~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1313 PPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLE-PISSKYSGRWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred CCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHH-HcCCcccccccchhhhhHHHHHH-HHHHHhhheE
Confidence 1 100 1 125567766 57999999999999999999988 7777777765
No 4
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.2e-94 Score=913.99 Aligned_cols=585 Identities=25% Similarity=0.412 Sum_probs=487.2
Q ss_pred ccceeEeccceeeeeccc----------------ccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHh
Q 000562 813 QPLSMAFGNINYFVDVPV----------------ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLA 876 (1419)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~ 876 (1419)
.++.+.|.++.|.++... ..++..+.++++.+|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 367889999999876432 1122233455678999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccc
Q 000562 877 GRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL 956 (1419)
Q Consensus 877 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~ 956 (1419)
|+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+.....++++++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876434689999999876433 345689999999999999999999999888776555556667789999999999999
Q ss_pred cCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhc
Q 000562 957 SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESF 1036 (1419)
Q Consensus 957 ~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~ 1036 (1419)
+|+.+|+...++||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999987788999999999999999999999999999999999999999999999999889999999999997788999
Q ss_pred CeEEEEecCCEEEEeCCCCCchhHHHHHHHhcCCCCCCCCCCCCccccccccChhhhh------c---ccchHHHHHHhc
Q 000562 1037 DELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSPVEES------R---LGVDFAEIYRRS 1107 (1419)
Q Consensus 1037 D~v~~l~~gG~~~~~G~~~~~~~~~~~~f~~~~g~~~~~~~~npA~~~l~v~~~~~~~------~---~~~~~~~~~~~s 1107 (1419)
|++++|++ |+++|.|+. +++++||+++ |. +||+++|||||++|+++...+. . ......+.|+++
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~-G~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESV-GF-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHC-CC-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 799999996 5899999999 55 6999999999999998753210 0 001233445422
Q ss_pred HHHHHHHHHHHhh--CC-CCC-----CCcCCC-CCCccCchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHH
Q 000562 1108 NLFQRNRELVESL--SK-PSP-----SSKKLN-FSTKYSQSFANQFLACLRKQNLSYWRNPQYTAVRFFYTVVISLMLGS 1178 (1419)
Q Consensus 1108 ~~~~~~~~~~~~~--~~-~~~-----~~~~~~-~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~al~~G~ 1178 (1419)
. .++..+..+.. .. +.+ ..+... ....+..+||+|+.+|++|++++ |||+.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111110 00 000 000000 11235678999999999999998 99999999999999999999999
Q ss_pred HhccCCCCCCCHHhHHHHHhHHHHHHHHHHHHHhhhhhhhhhhhhhhHhhhccCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 000562 1179 ICWKFGAKRENQQDLFNAMGSMYVAVLFIGITNASAVQPVVSVERYVSYRERAAGMYSALPFAFAQVVIEFPYVFGQALI 1258 (1419)
Q Consensus 1179 ~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~ 1258 (1419)
+||+++ ..+++++.|++||++++.++.+++++++.++.||+||+|||++|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999874 467899999999999999988888888999999999999999999999999999999999999999999
Q ss_pred HhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccccCCCCccchhhhh
Q 000562 1259 YCSIFYSMASFEWTAVKFISYIFFMYFTMLYFTFYGMMTTAITPNHNVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWY 1338 (1419)
Q Consensus 1259 ~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~ 1338 (1419)
|++|+|||+||++++.+||+|+++++++.++++++|+++++++||.++|+.+++++++++++|+||+++ +||+||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999999
Q ss_pred hhhCHHHHHHHHHHHHhhCCCccc---ccccCCCC--CcCHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 000562 1339 YWANPIAWSLYGLQTSQFGDDDKL---VKLSDGTG--SVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKA 1413 (1419)
Q Consensus 1339 ~~isp~~y~~~~l~~~~~~~~~~~---~~~~~~~~--~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~ 1413 (1419)
+|+||++|+++|++.|||++.+.. ..|++..+ ...| .++. ..++++...|.++++|++|+++|++++++++++
T Consensus 579 ~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c-~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~ 656 (659)
T PLN03211 579 KYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASC-KFVE-EDVAGQISPATSVSVLIFMFVGYRLLAYLALRR 656 (659)
T ss_pred HHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCC-ccch-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999875431 22322110 0111 1222 233445568999999999999999999999999
Q ss_pred ccc
Q 000562 1414 FKF 1416 (1419)
Q Consensus 1414 ~~~ 1416 (1419)
+||
T Consensus 657 ~~~ 659 (659)
T PLN03211 657 IKH 659 (659)
T ss_pred ccC
Confidence 886
No 5
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.2e-95 Score=907.31 Aligned_cols=580 Identities=32% Similarity=0.561 Sum_probs=505.9
Q ss_pred ccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc-eEEEEEEEC
Q 000562 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYIS 891 (1419)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~ 891 (1419)
.++.+.|+|+++..+.+.. ..+++|+||||+++|||++||||||||||||||++|+|+..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 4567889998887654321 3578999999999999999999999999999999999998764 789999999
Q ss_pred CccCCcccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCH
Q 000562 892 GYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLST 971 (1419)
Q Consensus 892 g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSg 971 (1419)
|++...+.+++.+|||+|+|.++|++||+|+|.|+|.+|+|.+.+.++++++|+++++.+||.+++|+++|.++.+|+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999988899999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEe
Q 000562 972 EQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA 1051 (1419)
Q Consensus 972 Gqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~ 1051 (1419)
||||||+||.+|+.||+||||||||||||+.++.+++++|+++|++|+|||||+|||+.++++.||++++|.+ |+++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996 699999
Q ss_pred CCCCCchhHHHHHHHhcCCCCCCCCCCCCccccccccChh-hhhcccchHHHHHHh------cHHHHHHH-HHHHhhCCC
Q 000562 1052 GPLGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSPV-EESRLGVDFAEIYRR------SNLFQRNR-ELVESLSKP 1123 (1419)
Q Consensus 1052 G~~~~~~~~~~~~f~~~~g~~~~~~~~npA~~~l~v~~~~-~~~~~~~~~~~~~~~------s~~~~~~~-~~~~~~~~~ 1123 (1419)
|+. +++.+||+++ |. +||+++|||||++|+++.. ..+. -.+..+.++. .+...+.. +..+.+...
T Consensus 253 G~~----~~~~~ff~~~-G~-~~P~~~Npadf~l~l~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GF-PCPELENPADFLLDLLSVDSGTRE-LEEAVRIAKLINKFSQTDNLKKTLEALEKSLSTS 325 (613)
T ss_pred cCH----HHHHHHHHhC-CC-CCCCcCChHHHHHHHHccCCCchh-HHhHHHHHHHhhhccccchhhhhHHHHhhhcccc
Confidence 997 5899999999 65 5999999999999998842 1100 0111111111 11111111 011111111
Q ss_pred CCCCcCCCCCCccCchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHhHHHHH
Q 000562 1124 SPSSKKLNFSTKYSQSFANQFLACLRKQNLSYWRNPQYTAVRFFYTVVISLMLGSICWKFGAKRENQQDLFNAMGSMYVA 1203 (1419)
Q Consensus 1124 ~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~al~~G~~f~~~~~~~~~~~~~~~~~g~~f~~ 1203 (1419)
. + .+.....+||.|+..+++|.+++.+|||.+...|+++.+++|+++|++||++++ +..+++++.|.+|+.
T Consensus 326 ~----~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~ 396 (613)
T KOG0061|consen 326 K----K--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFI 396 (613)
T ss_pred c----c--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHH
Confidence 1 1 111127899999999999999999999999999999999999999999999976 456677999999999
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhHhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHH
Q 000562 1204 VLFIGITNASAVQPVVSVERYVSYRERAAGMYSALPFAFAQVVIEFPYVFGQALIYCSIFYSMASFEWTAVKFISYIFFM 1283 (1419)
Q Consensus 1204 ~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~ 1283 (1419)
+.++.+..+...++.++.||++|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++..+|++|++++
T Consensus 397 ~~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~ 476 (613)
T KOG0061|consen 397 LSFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLII 476 (613)
T ss_pred HHHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHH
Confidence 99998888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccccCCCCccchhhhhhhhCHHHHHHHHHHHHhhCCCcccc
Q 000562 1284 YFTMLYFTFYGMMTTAITPNHNVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLV 1363 (1419)
Q Consensus 1284 ~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~ 1363 (1419)
++..+.++++|++++++.||..+|..+++++.+.+++|+||+++.++||+||+|++|+|+++|++||++.|||++....+
T Consensus 477 ~~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~ 556 (613)
T KOG0061|consen 477 LLSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRC 556 (613)
T ss_pred HHHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999732333
Q ss_pred cccC-CCCCcCHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 000562 1364 KLSD-GTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQK 1418 (1419)
Q Consensus 1364 ~~~~-~~~~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~ 1418 (1419)
...+ ..+..++.++++ .++++.++.|.++.++++|.++|++++++++++--..+
T Consensus 557 ~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~ 611 (613)
T KOG0061|consen 557 FLSGNLCCESTGEDVLK-QLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRK 611 (613)
T ss_pred ccCcCCcccccHHHHHH-hcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 2111 223455666666 58999999999999999999999999999999755443
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=2.6e-94 Score=913.34 Aligned_cols=569 Identities=29% Similarity=0.499 Sum_probs=501.3
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc-eEEEEEEECCccCCcccccceEEEEccCCCCCCCcc
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
+++.+|+|+|++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999987643 358999999998766667788999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCC-CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPG-INGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~-~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
|+|||.|++.++.+.....++++++++++++.+||.+++|+.+|.++ .++||||||||++||+||+++|+++||||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999999988777777778889999999999999999999754 57899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCCchhHHHHHHHhcCCCCCCCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPG 1077 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~~f~~~~g~~~~~~~ 1077 (1419)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|.||. +++.+||+++ |. +||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~-g~-~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDL-GH-PCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHc-CC-CCCCC
Confidence 9999999999999999998899999999999888999999999998 5899999997 5799999999 55 69999
Q ss_pred CCCccccccccChhhhhc-----ccchHHHHHHhcHHHHHHHHHHHhhCCCCC---CCcCCCCCCccCchhHHHHHHHHH
Q 000562 1078 YNPAAWMLEVTSPVEESR-----LGVDFAEIYRRSNLFQRNRELVESLSKPSP---SSKKLNFSTKYSQSFANQFLACLR 1149 (1419)
Q Consensus 1078 ~npA~~~l~v~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Q~~~l~~ 1149 (1419)
.|||||++|+++...+.+ ...++.+.|++|+.+++..+.......+.+ ........++|..+|+.|+..|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 999999999987543221 123566778887776655444332211111 111111234678999999999999
Q ss_pred HHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHhHHHHHHHHHHHHHhhhhhhhhhhhhhhHhhh
Q 000562 1150 KQNLSYWRNPQYTAVRFFYTVVISLMLGSICWKFGAKRENQQDLFNAMGSMYVAVLFIGITNASAVQPVVSVERYVSYRE 1229 (1419)
Q Consensus 1150 R~~~~~~R~~~~~~~r~~~~~~~al~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE 1229 (1419)
|+++++||||.+..+|+++++++|+++|++||++++ ++++++++.|++|++++++++.++..+.+.++.||++|+||
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE 425 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRE 425 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999986 56789999999999999999988888889999999999999
Q ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHH
Q 000562 1230 RAAGMYSALPFAFAQVVIEFPYVFGQALIYCSIFYSMASFEWTAVKFISYIFFMYFTMLYFTFYGMMTTAITPNHNVAAI 1309 (1419)
Q Consensus 1230 ~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~ 1309 (1419)
+.+|+|++++|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|+++++++.++++++|+++++++|+..+|+.
T Consensus 426 ~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~ 505 (617)
T TIGR00955 426 TRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALT 505 (617)
T ss_pred hcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCccchhhhhhhhCHHHHHHHHHHHHhhCCCcc-cccccC--CCCCcCHHHHHHHhhCCCc
Q 000562 1310 IAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDK-LVKLSD--GTGSVPVKHLLKDVFGFRH 1386 (1419)
Q Consensus 1310 ~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~-~~~~~~--~~~~~~~~~~l~~~~g~~~ 1386 (1419)
++++++.++++|+||++|.++||+||+|++|+||++|+++|++.|||++... +|...+ ..|..++ +++.+.||++.
T Consensus 506 ~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g-~~~l~~~g~~~ 584 (617)
T TIGR00955 506 VGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSG-EVILETLSFRN 584 (617)
T ss_pred HHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcCh-HHHHHhcCCCc
Confidence 9999999999999999999999999999999999999999999999988764 332111 1133445 66666899999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhccccCC
Q 000562 1387 DFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 1419 (1419)
Q Consensus 1387 ~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1419 (1419)
+++|.+++++++|.++|++++++++|+-...+|
T Consensus 585 ~~~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 585 ADLYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999999999999998766655
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=7.3e-92 Score=951.24 Aligned_cols=566 Identities=24% Similarity=0.397 Sum_probs=496.7
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC--ceEEEEEEECCccCCc--ccccceEEEEccCCCCCC
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSP 915 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~ 915 (1419)
.++.+|+|||+.++|||+++|+||||||||||||+|+|+..+ .+.+|+|.+||.+..+ ..+++.++|++|+|.+++
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 457799999999999999999999999999999999998532 2478999999987643 234567999999999999
Q ss_pred CccHHHHHHHHhhhcCCC----CCcHHHHHH-HHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 000562 916 GLTVLESLLFSAWLRLPS----EIELETQRA-FVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~----~~~~~~~~~-~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~il 990 (1419)
.+||+|+|.|++.+|.|. ....+++.+ .++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+|+
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 999999999999887653 223333333 357789999999999999999888999999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCCchhHHHHHHHhcC
Q 000562 991 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEAVE 1069 (1419)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~~f~~~~ 1069 (1419)
||||||+|||+.++..+++.|++++++ |+|||+++|||+.++++.||++++|++ |+++|+||. +++++||+++
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~l- 305 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKM- 305 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHc-
Confidence 999999999999999999999999874 999999999998889999999999985 799999996 5899999999
Q ss_pred CCCCCCCCCCCccccccccChhhh-------h---cccchHHHHHHhcHHHHHHHHHHHhhCCCC---------------
Q 000562 1070 GVPKIRPGYNPAAWMLEVTSPVEE-------S---RLGVDFAEIYRRSNLFQRNRELVESLSKPS--------------- 1124 (1419)
Q Consensus 1070 g~~~~~~~~npA~~~l~v~~~~~~-------~---~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--------------- 1124 (1419)
|. +||+++|||||++|+++++.. . ....+|++.|++|+.+++..+.+++.....
T Consensus 306 G~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 306 GF-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred CC-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 55 699999999999999986431 1 123579999999998887666554321110
Q ss_pred CCCcCCCCCCccCchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHhHHHHHH
Q 000562 1125 PSSKKLNFSTKYSQSFANQFLACLRKQNLSYWRNPQYTAVRFFYTVVISLMLGSICWKFGAKRENQQDLFNAMGSMYVAV 1204 (1419)
Q Consensus 1125 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~al~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~ 1204 (1419)
..++.....+.|..|+|+|+++|++|+++++||||.++.+|+++++++|+++|++||++++ +++++++++|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHH
Confidence 0011122234688999999999999999999999999999999999999999999999986 5578999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhhhhHhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHH
Q 000562 1205 LFIGITNASAVQPVVSVERYVSYRERAAGMYSALPFAFAQVVIEFPYVFGQALIYCSIFYSMASFEWTAVKFISYIFFMY 1284 (1419)
Q Consensus 1205 ~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1284 (1419)
++.++.++..+ +.+..||+||+|||.+++|++++|++|++++|+|+.++.+++|++|+|||+||++++.+||+|+++++
T Consensus 462 ~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 99999887665 44567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccccCCCCccchhhhhhhhCHHHHHHHHHHHHhhCCCccccc
Q 000562 1285 FTMLYFTFYGMMTTAITPNHNVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVK 1364 (1419)
Q Consensus 1285 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~ 1364 (1419)
++.++++++++++++++||..+|+.+++++++++++|+||++|+++||+||+|++|+||++|+++|++.|||++...+|.
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~ 620 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECS 620 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998776552
Q ss_pred --ccC-----------CC----------CCcCHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000562 1365 --LSD-----------GT----------GSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKF 1416 (1419)
Q Consensus 1365 --~~~-----------~~----------~~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1416 (1419)
+|. .. +.+++.+|++..||++++|+|++++++++|+++|+++++++++++++
T Consensus 621 ~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 621 QYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred ccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 110 00 13467899998999999999999999999999999999999999873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=6e-91 Score=936.61 Aligned_cols=595 Identities=21% Similarity=0.363 Sum_probs=501.4
Q ss_pred ccccceeEeccceeeeeccccc-----------------cc-cc---ccccceeeeeceeeEEeCCeEEEEEcCCCCChh
Q 000562 811 PFQPLSMAFGNINYFVDVPVEL-----------------KQ-EG---VLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKT 869 (1419)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~-----------------~~-~~---~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKT 869 (1419)
+.+.+.+.|+|+++..+....- .+ .+ .+..++.+|+|||+.++|||+++|+||||||||
T Consensus 126 ~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKS 205 (1470)
T PLN03140 126 KLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKT 205 (1470)
T ss_pred CCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHH
Confidence 3456788899988776521110 00 01 112357899999999999999999999999999
Q ss_pred HHHHhHhCCCCC-ceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCC-------CcHHHH-
Q 000562 870 TLMDVLAGRKTG-GIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSE-------IELETQ- 940 (1419)
Q Consensus 870 TLl~~L~g~~~~-~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~-------~~~~~~- 940 (1419)
|||++|+|+.++ ...+|+|.+||++..+...++.++||+|+|.|++.+||+|+|.|++.++.+.. ...+++
T Consensus 206 TLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~ 285 (1470)
T PLN03140 206 TLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKD 285 (1470)
T ss_pred HHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHh
Confidence 999999998653 23589999999987544446789999999999999999999999988764311 111111
Q ss_pred -----------------------HHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 941 -----------------------RAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 941 -----------------------~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
+..++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+++||||||+
T Consensus 286 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTs 365 (1470)
T PLN03140 286 AGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEIST 365 (1470)
T ss_pred ccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCc
Confidence 123578999999999999999998899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCCchhHHHHHHHhcCCCCCCCC
Q 000562 998 GLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRP 1076 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~~f~~~~g~~~~~~ 1076 (1419)
|||+.++..+++.|+++++ .|+|||+++|||+.++++.||++++|++ |+++|+||. +++++||+++ |+ +||+
T Consensus 366 GLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G~ivy~G~~----~~~~~yF~~l-Gf-~cP~ 438 (1470)
T PLN03140 366 GLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-GQIVYQGPR----DHILEFFESC-GF-KCPE 438 (1470)
T ss_pred CccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-ceEEEeCCH----HHHHHHHHHc-CC-CCCC
Confidence 9999999999999999986 4899999999998889999999999985 899999996 6899999999 65 6999
Q ss_pred CCCCccccccccChhhhh------------cccchHHHHHHhcHHHHHHHHHHHhhCCCCCCCcCCCCCCccCchhHHHH
Q 000562 1077 GYNPAAWMLEVTSPVEES------------RLGVDFAEIYRRSNLFQRNRELVESLSKPSPSSKKLNFSTKYSQSFANQF 1144 (1419)
Q Consensus 1077 ~~npA~~~l~v~~~~~~~------------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~ 1144 (1419)
++|||||++|+++..... ....+|++.|++|+.+++..+.++.........+.....++|..+++.|+
T Consensus 439 ~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~ 518 (1470)
T PLN03140 439 RKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELL 518 (1470)
T ss_pred CCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHH
Confidence 999999999999864321 12347899999998887665544321111111111112346889999999
Q ss_pred HHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHhHHHHHHHHHHHHHhhhhhhhhhhhhh
Q 000562 1145 LACLRKQNLSYWRNPQYTAVRFFYTVVISLMLGSICWKFGAKRENQQDLFNAMGSMYVAVLFIGITNASAVQPVVSVERY 1224 (1419)
Q Consensus 1145 ~~l~~R~~~~~~R~~~~~~~r~~~~~~~al~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~ 1224 (1419)
+.|++|+++.+||||.++..|+++.+++|+++|++||+++.+..+..+.+.++|++||+++++.+.++.+ ++.+..||+
T Consensus 519 ~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~-l~~~~~~r~ 597 (1470)
T PLN03140 519 KACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAE-LALMIQRLP 597 (1470)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccc
Confidence 9999999999999999999999999999999999999998765555566778899999998888776544 577889999
Q ss_pred hHhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Q 000562 1225 VSYRERAAGMYSALPFAFAQVVIEFPYVFGQALIYCSIFYSMASFEWTAVKFISYIFFMYFTMLYFTFYGMMTTAITPNH 1304 (1419)
Q Consensus 1225 v~~rE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~ 1304 (1419)
||+|||.+++|++++|++|++++|+|+.++.+++|++|+|||+||++++++||.|+++++++.++++++++++++++|+.
T Consensus 598 vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~ 677 (1470)
T PLN03140 598 VFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTM 677 (1470)
T ss_pred hhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCccchhhhhhhhCHHHHHHHHHHHHhhCCCcccc-cccCCCCCcCHHHHHHHhhC
Q 000562 1305 NVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLV-KLSDGTGSVPVKHLLKDVFG 1383 (1419)
Q Consensus 1305 ~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~g 1383 (1419)
.+|+.++++++.++++|+||+||+++||+||+|++|+||++|+++|+++|||.+..... .+.+. +..++.++| +.||
T Consensus 678 ~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~-~~~~G~~~L-~~~g 755 (1470)
T PLN03140 678 IIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDN-STRLGTAVL-NIFD 755 (1470)
T ss_pred HHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCC-CcccHHHHH-HhcC
Confidence 99999999999999999999999999999999999999999999999999997755321 11121 234455666 6899
Q ss_pred CCcc--chhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000562 1384 FRHD--FLVIAGAMVVAFATIFAMIFAYAIKAFK 1415 (1419)
Q Consensus 1384 ~~~~--~~~~~~~il~~~~~~f~~~~~~~l~~~~ 1415 (1419)
+..+ |.|+++++|++|+++|.+++++++++++
T Consensus 756 ~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~ 789 (1470)
T PLN03140 756 VFTDKNWYWIGVGALLGFTILFNVLFTLALTYLN 789 (1470)
T ss_pred cCccccchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9754 6799999999999999999999999987
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.3e-86 Score=825.03 Aligned_cols=568 Identities=24% Similarity=0.432 Sum_probs=504.5
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc-eEEEEEEECCccCCcccccceEEEEccCCCCCCCcc
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
...++|+|+||.++||+++.++||+||||||||++|+|..... ...|+|.+||++.+...-++.++|+.|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3468999999999999999999999999999999999975532 235799999998766444788999999999999999
Q ss_pred HHHHHHHHhhhcCCCC----CcHHHHH-HHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 919 VLESLLFSAWLRLPSE----IELETQR-AFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~----~~~~~~~-~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
|+|+|.|+++++.|.. ..+.++. +.++.+++.+||.+|+|+++|+...||+||||||||+||.+++.+++++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999998732 2222222 2678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCCchhHHHHHHHhcCCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVP 1072 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~~f~~~~g~~ 1072 (1419)
|+|+|||+.++.++.+.||++++. +.|+++++|||+.++++.||+|++|.+ |+++|+||. +++++||+++ |.
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~-Gf- 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDM-GF- 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhc-Cc-
Confidence 999999999999999999999865 899999999999999999999999996 799999997 5899999999 55
Q ss_pred CCCCCCCCccccccccChhhhhc-----------c-cchHHHHHHhcHHHHHHHHHHHhhCCCCCCCcCCCCCCccCchh
Q 000562 1073 KIRPGYNPAAWMLEVTSPVEESR-----------L-GVDFAEIYRRSNLFQRNRELVESLSKPSPSSKKLNFSTKYSQSF 1140 (1419)
Q Consensus 1073 ~~~~~~npA~~~l~v~~~~~~~~-----------~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1140 (1419)
+||+..++|||+.||++...+.+ . ..+|++.|++|+.+++.+..++........++.....++|..|+
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 69999999999999999322211 1 15899999999999876655433222222333344457899999
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHhHHHHHhHHHHHHHHHHHHHhhhhhhhhh
Q 000562 1141 ANQFLACLRKQNLSYWRNPQYTAVRFFYTVVISLMLGSICWKFGAKRENQQDLFNAMGSMYVAVLFIGITNASAVQPVVS 1220 (1419)
Q Consensus 1141 ~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~al~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~ 1220 (1419)
|.|+++|+.|.++.+.||..|...++++.+++|+++|++|++... .+..+.+.+.|++||++++..++.+.++ +...
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHH
Confidence 999999999999999999999999999999999999999999983 5677899999999999999888887766 4456
Q ss_pred hhhhhHhhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000562 1221 VERYVSYRERAAGMYSALPFAFAQVVIEFPYVFGQALIYCSIFYSMASFEWTAVKFISYIFFMYFTMLYFTFYGMMTTAI 1300 (1419)
Q Consensus 1221 ~er~v~~rE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1300 (1419)
+.|+||+|||...+|+++||.++.+++++|+.++.+++|.+|+||++||.+++++||.|+++++++..+++++.++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhhccccCCCCccchhhhhhhhCHHHHHHHHHHHHhhCCCccccc--ccCC----------
Q 000562 1301 TPNHNVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVK--LSDG---------- 1368 (1419)
Q Consensus 1301 ~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~--~~~~---------- 1368 (1419)
+++..+|+.++++.+.+..+++||+||.++||+||+|++|+||+.|++++++.|||++.+.+|. .|+.
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c 675 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVC 675 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999887764 1211
Q ss_pred --------CCCcCHHHHHHHhhCCCccchhHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000562 1369 --------TGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQ 1417 (1419)
Q Consensus 1369 --------~~~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~ 1417 (1419)
...+.+.+|++..|.|++.|.|++++|++||.++|.+++.+++.++|.-
T Consensus 676 ~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 676 AATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred hhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 0124567899999999999999999999999999999999999999853
No 10
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.3e-79 Score=764.99 Aligned_cols=582 Identities=30% Similarity=0.496 Sum_probs=491.5
Q ss_pred CCCcEEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcceeeeecceEeEeCCeEEEEEcCCCCcHHH
Q 000562 97 LPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTT 176 (1419)
Q Consensus 97 ~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 176 (1419)
...++++|+|+++++... .+..+++|+||||+++|||++||+||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK-----------------------------SKKTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC-----------------------------CCccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 346889999999987532 113468999999999999999999999999999
Q ss_pred HHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHh
Q 000562 177 LLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIA 256 (1419)
Q Consensus 177 LL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 256 (1419)
||++|+|+..+...++|+|++||++.+....++.+|||.|+|.+++++||+|||.|+|+++.+... .+
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~-------~~----- 139 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSL-------SK----- 139 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCC-------CH-----
Confidence 999999999876678999999998887777789999999999999999999999999998865421 11
Q ss_pred CCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCC
Q 000562 257 GIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNG 336 (1419)
Q Consensus 257 ~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsg 336 (1419)
++.+.+++++++.|||.+|+||+||+...|||||||||||+||..|+.+|+||||||||||
T Consensus 140 -------------------~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 140 -------------------EEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred -------------------HHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 1234579999999999999999999988899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHH
Q 000562 337 LDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFL 416 (1419)
Q Consensus 337 LDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl 416 (1419)
||+.++.++++.|+++|+. |+|+|+++|||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcc--cccccccCCCCCCCCCCHhHHHHHHH-hchhhhchHHhhcCccccccCCcccccCCCCCCchHHHHHHHHH
Q 000562 417 QEVTSKK--DQEQYWSNPYLPYRYISPGKFAEAFH-SYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFN 493 (1419)
Q Consensus 417 ~~v~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 493 (1419)
.++.+.. .+..... .........++ .....+... ...... .+.. ........++|.|+..+.+
T Consensus 280 l~l~s~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~-~~~~~~~~s~~~q~~~L~~ 345 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA--------VRIAKLINKFSQTDNLKKTLE-ALEKSL----STSK-KVEIGTSPSWWTQFKILLK 345 (613)
T ss_pred HHHHccCCCchhHHhH--------HHHHHHhhhccccchhhhhHH-HHhhhc----cccc-ccccccCCcHHHHHHHHHH
Confidence 9988743 1110000 00000000000 000000000 000000 0000 0001116789999999999
Q ss_pred HHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccccchhhHHHHHHHHHHHHHHHH-HHHHHHhhhhhHHHh
Q 000562 494 WQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFT-EVSMLVAKLPVLYKH 572 (1419)
Q Consensus 494 r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~-~~~~~~~~~~v~~k~ 572 (1419)
|.+....|++.+...|.++.+++++++|++|++.+.+.... ....|++|+.+.+..+..+. .+..+..++++|.||
T Consensus 346 R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE 422 (613)
T KOG0061|consen 346 RSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKGI---QNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRE 422 (613)
T ss_pred HHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHH---HHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999986554433 25678888888877666655 578888999999999
Q ss_pred hcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHH
Q 000562 573 RDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANT 652 (1419)
Q Consensus 573 r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~ 652 (1419)
+..++|+.++|++++.+.++|+.++.+++|.+++|||+|+.++..+|+.++++.++...++.+++.+++++.++...|.+
T Consensus 423 ~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~ 502 (613)
T KOG0061|consen 423 TSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATS 502 (613)
T ss_pred HhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCcccccCC--CCCccchHHHhhhcCCCCCCc
Q 000562 653 FGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKAG--NSNFSLGEAILRQRSLFPESY 730 (1419)
Q Consensus 653 ~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~nef~~~~~~~~~~--~~~~~~g~~~l~~~~~~~~~~ 730 (1419)
+++++.+.+++++||+++.+.||.||.|+.|+|+..|+++++..|||.+....|... ......+.++++..++...+
T Consensus 503 ~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~- 581 (613)
T KOG0061|consen 503 LGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDSS- 581 (613)
T ss_pred hHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCcccc-
Confidence 999999999999999999999999999999999999999999999999733333222 34466788899988876654
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000562 731 WYWIGVGAMLGYTLLFNALFTFFLSYLN 758 (1419)
Q Consensus 731 ~~w~~~g~ll~~~~~f~~l~~~~l~~~~ 758 (1419)
.|.++.++++++++|.++.++++++..
T Consensus 582 -~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 582 -FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 588999999999999999999998764
No 11
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=3.4e-78 Score=766.10 Aligned_cols=569 Identities=25% Similarity=0.400 Sum_probs=479.6
Q ss_pred CcceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCC
Q 000562 145 RSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 145 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 224 (1419)
+.++++|+|+|+.++|||+++|+|||||||||||++|+|+.++....+|+|.+||++++....++.++||+|+|++++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 34578999999999999999999999999999999999998765456899999999876544567899999999999999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc-
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM- 303 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~- 303 (1419)
||+|||.|+++++.+....+ . +.+.+++++++.+||++++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~~~~-------~------------------------~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRVTK-------K------------------------EKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCCCH-------H------------------------HHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 99999999988764321110 0 112357889999999999999999864
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
.++|||||||||+||++|+.+|++++|||||+|||+.++.++++.|+++++. ++|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~~-g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQK-GKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHhC-CCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 7899999999999999999999999999999999999999999999999864 788889999999999999999999999
Q ss_pred CeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhcC
Q 000562 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1419)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 463 (1419)
|+++|+|+++++.+||+++|++||++.||+||+.++.+..+.... . .....+++.+.++.+...++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999999875432110 0 011234455556555444443332221
Q ss_pred cccccc---CCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccccchh
Q 000562 464 PFDRRF---NHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLY 540 (1419)
Q Consensus 464 ~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~ 540 (1419)
...+.. .........++..+++.|+..+.+|.++..+||+..+..++++.+++++++|++|++.+.+.. +....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~~---~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQK---GVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCHH---HHHHH
Confidence 111000 000111224567789999999999999999999999999999999999999999999875432 33456
Q ss_pred hHHHHHHHHHHHHHHH-HHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchHHH
Q 000562 541 LGALYFSMVIILFNGF-TEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRF 619 (1419)
Q Consensus 541 ~g~lf~~l~~~~~~~~-~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf 619 (1419)
.|++|+.++..++..+ ..+..+..++++++||+..++|++++|++++.+.++|+.++.+++|.+++|||+|+.+++.+|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 7889998888777765 445667789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhh
Q 000562 620 SRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEF 699 (1419)
Q Consensus 620 ~~~~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~nef 699 (1419)
+.+++++++...++.+++.++++++++..+|..++++..+++++++||+++.++||.||+|++|+||+.|+++++++|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-cccCCCC---CccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000562 700 LGHSW-DKKAGNS---NFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYL 757 (1419)
Q Consensus 700 ~~~~~-~~~~~~~---~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~ 757 (1419)
.+..+ .|...+. +...|..+++.+++... ++|.+++++++++++|.++.+++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88765 4432111 22358999999888664 459999999999999999999999874
No 12
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.8e-77 Score=755.79 Aligned_cols=608 Identities=22% Similarity=0.322 Sum_probs=468.7
Q ss_pred CCCCcEEEEeeeEEEEEEecCCCCCCChhHHHHHHHHH--HHHHHHHhcCCCcceeeeecceEeEeCCeEEEEEcCCCCc
Q 000562 96 ELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEA--LLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSG 173 (1419)
Q Consensus 96 ~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsG 173 (1419)
..++++++|+|+++.+.......+... +...... -.+++.. +..++++|+|||++++|||+++|+||||||
T Consensus 34 ~~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~---~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaG 106 (659)
T PLN03211 34 SCYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKPKISDETR---QIQERTILNGVTGMASPGEILAVLGPSGSG 106 (659)
T ss_pred CCCceEEEEEeEEEEEccCCCcccccc----cccccccccccccccc---cCCCCeeeeCCEEEEECCEEEEEECCCCCC
Confidence 345799999999999754310111110 0111000 0111111 112457999999999999999999999999
Q ss_pred HHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHH
Q 000562 174 KTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARRE 253 (1419)
Q Consensus 174 KSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e 253 (1419)
|||||++|+|++++. ..+|+|.+||+++... .++.++||+|+|.+++.+||+||+.|++.++.+... .+.
T Consensus 107 KSTLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~-------~~~- 176 (659)
T PLN03211 107 KSTLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSL-------TKQ- 176 (659)
T ss_pred HHHHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCC-------CHH-
Confidence 999999999998763 3589999999987542 245689999999999999999999998765422110 000
Q ss_pred HHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecC
Q 000562 254 KIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEI 333 (1419)
Q Consensus 254 ~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEp 333 (1419)
+...+++++++.+||++++||.||++..++|||||||||+||++|+.+|++++||||
T Consensus 177 -----------------------~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEP 233 (659)
T PLN03211 177 -----------------------EKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEP 233 (659)
T ss_pred -----------------------HHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCC
Confidence 112347889999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChhhHHHHHHhCCCCCCCCCChH
Q 000562 334 SNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVA 413 (1419)
Q Consensus 334 tsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~a 413 (1419)
|+|||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+.+++.+||+++|++||++.|||
T Consensus 234 tsgLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpA 312 (659)
T PLN03211 234 TSGLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPA 312 (659)
T ss_pred CCCcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHH
Confidence 999999999999999999986 4778888888888789999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhcC---cccccc-----CCcc-cccCCCCCCch
Q 000562 414 DFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV---PFDRRF-----NHPA-ALSTSKYGEKR 484 (1419)
Q Consensus 414 dfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~-----~~~~-~~~~~~~~~s~ 484 (1419)
||+.++.+...+.........+ ...++..+.|++.. .+........ +..... ..+. ......+..++
T Consensus 313 Df~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 388 (659)
T PLN03211 313 DFLLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTW 388 (659)
T ss_pred HHHHHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCH
Confidence 9999998764321100000011 11122333333211 1111111000 000000 0000 00112244678
Q ss_pred HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccccchhhHHHHHHHHHHHH-HHHHHHHHHH
Q 000562 485 SELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILF-NGFTEVSMLV 563 (1419)
Q Consensus 485 ~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~-~~~~~~~~~~ 563 (1419)
+.|+..+++|+++. +|+......|+++.+++|+++|++||+.+ ..+.+...|++||++++.++ ..+..+..+.
T Consensus 389 ~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~ 462 (659)
T PLN03211 389 FNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFP 462 (659)
T ss_pred HHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999887 78887788999999999999999999874 12345678999998777554 4567778888
Q ss_pred hhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000562 564 AKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSL 643 (1419)
Q Consensus 564 ~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~~ 643 (1419)
.++++++|||..++|++++|++++++.++|+.++.+++|.+++|||+|+.+++.+|+.+++++++...++.+++.+++++
T Consensus 463 ~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~ 542 (659)
T PLN03211 463 QERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAA 542 (659)
T ss_pred HhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCcc-----cccCCCCCccchHH
Q 000562 644 GRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSW-----DKKAGNSNFSLGEA 718 (1419)
Q Consensus 644 ~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~nef~~~~~-----~~~~~~~~~~~g~~ 718 (1419)
++++.+|+++++++.+++++++||+++ +||+||+|++|+||+.|+++++++|||.+.+. .|..+......+..
T Consensus 543 ~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~ 620 (659)
T PLN03211 543 IMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCK 620 (659)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCc
Confidence 999999999999999999999999997 79999999999999999999999999976432 34221110011111
Q ss_pred HhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000562 719 ILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLN 758 (1419)
Q Consensus 719 ~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~ 758 (1419)
++....+. ....|.+++++++++++|+++.+++|++.+
T Consensus 621 ~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 621 FVEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred cchhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222222 234788999999999999999999997654
No 13
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.4e-72 Score=705.60 Aligned_cols=777 Identities=21% Similarity=0.271 Sum_probs=413.2
Q ss_pred cCCCcceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCC
Q 000562 142 RGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQD 218 (1419)
Q Consensus 142 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d 218 (1419)
++.+++..||+|+|+.|++|+.++|+|||||||||+++.|.+.++|. +|+|.++|+++.++.. +.++|.|+|+|
T Consensus 360 YPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QeP 436 (1228)
T KOG0055|consen 360 YPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEP 436 (1228)
T ss_pred CCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeech
Confidence 44556778999999999999999999999999999999999999987 9999999999988765 47899999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccc
Q 000562 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1419)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1419)
.+| ..||+|||.|+.. ....+...++++.. ...+. +..|++.+||.
T Consensus 437 vlF-~~tI~eNI~~G~~----dat~~~i~~a~k~a--------------------------na~~f---i~~lp~g~~T~ 482 (1228)
T KOG0055|consen 437 VLF-ATTIRENIRYGKP----DATREEIEEAAKAA--------------------------NAHDF---ILKLPDGYDTL 482 (1228)
T ss_pred hhh-cccHHHHHhcCCC----cccHHHHHHHHHHc--------------------------cHHHH---HHhhHHhhccc
Confidence 755 6799999998632 11112222222111 01122 34588899999
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
||+++. .|||||||||+|||||+.+|+||+||||||+||+.+...+.+.|++..+ |+|||+ +.|..+.+-+ +|+|
T Consensus 483 vge~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~--grTTiv-VaHRLStIrn-aD~I 557 (1228)
T KOG0055|consen 483 VGERGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASK--GRTTIV-VAHRLSTIRN-ADKI 557 (1228)
T ss_pred ccCCCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhc--CCeEEE-Eeeehhhhhc-cCEE
Confidence 998776 4999999999999999999999999999999999999999999998754 667776 6777788777 9999
Q ss_pred EEEcCCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHH--HHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhc
Q 000562 379 ILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFL--QEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKN 456 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl--~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (1419)
++|++|+|++.|+++|++.. -| --++.. |+....++. ..+... . ..+.....+.+.
T Consensus 558 ~v~~~G~IvE~G~h~ELi~~---~G-------~Y~~lv~~Q~~~~~~~~-~~~~~~-~------~~~~~~s~~~s~---- 615 (1228)
T KOG0055|consen 558 AVMEEGKIVEQGTHDELIAL---GG-------IYSSLVRLQELEKAAED-EEEEES-L------KEERSRSLKSSS---- 615 (1228)
T ss_pred EEEECCEEEEecCHHHHHhc---cc-------hHHHHHHHHhhhhhhhc-cccccc-h------hhhhhhcccccc----
Confidence 99999999999999999852 01 112221 121111110 000000 0 000000000000
Q ss_pred hHHhhcCccccccC---CcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHH-------HHHHHHhh--
Q 000562 457 LSEELAVPFDRRFN---HPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIV-------ALITMTVF-- 524 (1419)
Q Consensus 457 l~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~-------ali~g~vf-- 524 (1419)
.............. .+.. ....... ..+..+..+.|-+...+.++.+.+...+..++. +++++.++
T Consensus 616 ~~~~~~~~~~~~~~~~~~~~~-e~~~~~~-~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~ 693 (1228)
T KOG0055|consen 616 SSPSLSRGSNRSNLLSVKPEG-EDPEEPV-SEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEA 693 (1228)
T ss_pred ccccccCCccccccccccccc-ccccccc-ccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 00000000000000 0000 0000000 000012223333334444444333333322222 22222222
Q ss_pred -cccCCCCccccccchhhHHHHHHHHHHHH--HHHHHHHHHH--------hhhhhHHH--hhcccccchhhHHHHHHHHH
Q 000562 525 -FRTTMHHKTIDDGGLYLGALYFSMVIILF--NGFTEVSMLV--------AKLPVLYK--HRDLHFYPSWVYTIPSWALS 591 (1419)
Q Consensus 525 -~~~~~~~~~~~~~~~~~g~lf~~l~~~~~--~~~~~~~~~~--------~~~~v~~k--~r~~~~y~~~ay~l~~~~~~ 591 (1419)
+..+.+ ...........+|.++....+ +.+....... .|...|.+ ..+..||.---.. +.....
T Consensus 694 f~~~~~~--~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~R 770 (1228)
T KOG0055|consen 694 FYPPDDD--ELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSR 770 (1228)
T ss_pred HhCCChH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHH
Confidence 211111 111111112222222221111 0000111111 11111111 0111122111000 000000
Q ss_pred hhHHHHHHHHHHhhhhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH------HHHHHh
Q 000562 592 IPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAML------VVMALG 665 (1419)
Q Consensus 592 iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l------~~~l~~ 665 (1419)
+- .=.++.....-+-+ ..+...++++.-.+.+|...++-+.+ +++.++
T Consensus 771 La-----------------~Da~~vr~~v~~rl---------~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~ 824 (1228)
T KOG0055|consen 771 LA-----------------TDASNVRAAVGDRL---------SLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILS 824 (1228)
T ss_pred Hh-----------------cchHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000000000000 01111111111222233333322222 222222
Q ss_pred hccccCCCcchhHHHHHhhcH---HHHHHHHHHHhhhcCCcccccCCCCCccchHHHhhhcCC---CC----CCcchHHH
Q 000562 666 GFIISRDSIPKWWIWGFWVSP---LMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSL---FP----ESYWYWIG 735 (1419)
Q Consensus 666 Gf~i~~~~ip~~~~w~~~isp---~~ya~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~---~~----~~~~~w~~ 735 (1419)
++.-.+ ++.-.+. -.|......++|-..+--+. ...+..+.+.+.+.- .+ .....|.+
T Consensus 825 ~~~~~~--------~~~~~~~~~~~~~~ea~~iA~eai~NIrTV----~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~g 892 (1228)
T KOG0055|consen 825 GYLQKK--------FLKGFSKDDKKAYEEASKIAIEAVSNIRTV----AALCAEEKFMELYKEELEKPRKSSFKRGLISG 892 (1228)
T ss_pred HHHHHH--------HHhhhhHHHHHHHHHHHHHHHHHHHhHHHH----HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 221000 0000000 00111111122211110000 001111111111000 00 00112444
Q ss_pred HHHHHHHHHHH---HHHHHHHHHhcCCCCCc-cccc-chhhhh--hH---HhhhcCchh------hHHHHHhhhcccccc
Q 000562 736 VGAMLGYTLLF---NALFTFFLSYLNPLGKQ-QAVV-SKKELQ--ER---DRRRKGENV------VIELREYLQRSSSLN 799 (1419)
Q Consensus 736 ~g~ll~~~~~f---~~l~~~~l~~~~~~~~~-~~~~-~~~~~~--~~---~~~~~~~~~------~~~~~~~~~~~~~~~ 799 (1419)
++.-+...++| .+.++++......-... ..+. ...... .. ....-.++. ...+-....+.+..+
T Consensus 893 l~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~ 972 (1228)
T KOG0055|consen 893 LGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKPTID 972 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCC
Confidence 44333332222 22222222222110000 0000 000000 00 000000000 000000001111111
Q ss_pred ccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCC
Q 000562 800 GKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK 879 (1419)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~ 879 (1419)
. ....+...+...-.+.++|+++.++.. ...++|+|+|+++++|+.+||+|||||||||.+.+|-+..
T Consensus 973 ~--~~~~~~~~~~~~G~I~~~~V~F~YPsR----------P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfY 1040 (1228)
T KOG0055|consen 973 P--DSTSGGKLPNVKGDIEFRNVSFAYPTR----------PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFY 1040 (1228)
T ss_pred C--CCCCCCccccceeEEEEeeeEeeCCCC----------CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhc
Confidence 1 011222233344568899998887642 4568999999999999999999999999999999998765
Q ss_pred CCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHH------
Q 000562 880 TGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMEL------ 950 (1419)
Q Consensus 880 ~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~------ 950 (1419)
. +..|.|.|||++++. +..|+.+|.|.|+|.++. -|++||+.|+. . +.+.++ +.++.+.
T Consensus 1041 d--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~-~----~vs~~e----Ii~Aak~ANaH~F 1108 (1228)
T KOG0055|consen 1041 D--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS-E----EVSEEE----IIEAAKLANAHNF 1108 (1228)
T ss_pred C--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC-C----CCCHHH----HHHHHHHhhhHHH
Confidence 5 679999999998754 567889999999999985 59999999981 1 133222 2233332
Q ss_pred -cCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCC
Q 000562 951 -VELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPS 1029 (1419)
Q Consensus 951 -l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~ 1029 (1419)
.+|.+-.|+.+|..|. +||||||||++|||||++||+||+|||+||.||+++.+.|+++|.+. ..|+|.|+++|++|
T Consensus 1109 I~sLP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a-~~gRT~IvIAHRLS 1186 (1228)
T KOG0055|consen 1109 ISSLPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRA-MEGRTTIVIAHRLS 1186 (1228)
T ss_pred HhcCcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHh-hcCCcEEEEecchh
Confidence 2455667888887665 69999999999999999999999999999999999999999999995 46999999999986
Q ss_pred HHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1030 IDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1030 ~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
....+|.|.|+++ |+++..|.-
T Consensus 1187 --TIqnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1187 --TIQNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred --hhhcCCEEEEEEC-CEEEecccH
Confidence 6788999999985 899999984
No 14
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.8e-72 Score=720.63 Aligned_cols=745 Identities=21% Similarity=0.275 Sum_probs=409.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1419)
.+.|+|||+.|++|++++|+||.|||||+||.+|.|+++. .+|+|.++| .+|||||++|++ +.|||
T Consensus 534 ~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~---~sG~v~v~g----------siaYv~Q~pWI~-ngTvr 599 (1381)
T KOG0054|consen 534 EPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPK---LSGSVAVNG----------SVAYVPQQPWIQ-NGTVR 599 (1381)
T ss_pred cccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCccc---ccceEEEcC----------eEEEeccccHhh-CCcHH
Confidence 3489999999999999999999999999999999999975 499999999 589999999954 67999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000562 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1419)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1419)
|||.|+..+. .++|+.+.++|.+++|..+.|++|. |.||++++ +|
T Consensus 600 eNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD~--------------------------------TeIGErGi-nL 644 (1381)
T KOG0054|consen 600 ENILFGSPYD--EERYDKVIKACALKKDLEILPFGDL--------------------------------TEIGERGI-NL 644 (1381)
T ss_pred HhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCCc--------------------------------ceecCCcc-CC
Confidence 9999998764 6789999999999999988888874 99998776 79
Q ss_pred ChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 000562 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1419)
Q Consensus 308 SGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv 387 (1419)
||||||||++|||+++++||++||+|.|++|+++..+|++.+-. ..++++|+|.++| .-+....+|.|++|++|+|.
T Consensus 645 SGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~--~~L~~KT~ILVTH-ql~~L~~ad~Iivl~~G~I~ 721 (1381)
T KOG0054|consen 645 SGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIR--GLLRGKTVILVTH-QLQFLPHADQIIVLKDGKIV 721 (1381)
T ss_pred cHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHH--hhhcCCEEEEEeC-chhhhhhCCEEEEecCCeEe
Confidence 99999999999999999999999999999999999999986663 2345566666766 66778899999999999999
Q ss_pred EEcChhhHHH---HHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhcCc
Q 000562 388 YQGPRVSVLD---FFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVP 464 (1419)
Q Consensus 388 ~~G~~~~~~~---~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 464 (1419)
..|+.+|+.+ +|+++ ..+....++.+ .....+.......+. +. +.........+. ..
T Consensus 722 ~~Gty~el~~~~~~~~~l-------------~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~--~~ 781 (1381)
T KOG0054|consen 722 ESGTYEELLKSGGDFAEL-------------AHEEESEQEEE---ASEKDLESGESSRES-ES-RSLESLSSEEEK--SK 781 (1381)
T ss_pred cccCHHHHHhcchhHHHH-------------hhccchhhccc---cccccccccccccch-hh-hhhhhhcccccc--cc
Confidence 9999999973 23322 00000000000 000000000000000 00 000000000000 00
Q ss_pred cccccCCcccccC---CCCCCchHHHHHHHHHHHHHHHhhchhHHH-HHHHHHHHHHHHHHHh-hcccCCCCc--cc---
Q 000562 465 FDRRFNHPAALST---SKYGEKRSELLKTSFNWQLLLMKRNSFIYV-FKFIQLLIVALITMTV-FFRTTMHHK--TI--- 534 (1419)
Q Consensus 465 ~~~~~~~~~~~~~---~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~-~~~~~~~i~ali~g~v-f~~~~~~~~--~~--- 534 (1419)
.. +........ ...+. ......+.+........... .-+.+.....+.++.- |...+.+.. ..
T Consensus 782 ~~--~~~~~~~~~~ee~~~G~-----v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~ 854 (1381)
T KOG0054|consen 782 DE--KEEEDKLVQEEERETGK-----VSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTT 854 (1381)
T ss_pred cc--cchhhHHHHHHHHhcCE-----eeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccC
Confidence 00 000000000 00000 00111122222111111111 1112222222222332 222221111 01
Q ss_pred cccchhhHHHHHHHHHHHH-HHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccc
Q 000562 535 DDGGLYLGALYFSMVIILF-NGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYD 613 (1419)
Q Consensus 535 ~~~~~~~g~lf~~l~~~~~-~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~ 613 (1419)
.+...|.+.+.+..+...+ ..+..+......... .+.-...+++....+-..++...|.+.+
T Consensus 855 ~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~a-S~~Lh~~ml~~Ilrapm~FFdtTP~GRI---------------- 917 (1381)
T KOG0054|consen 855 VSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKA-SRKLHDKLLNSILRAPMSFFDTTPTGRI---------------- 917 (1381)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcchhcCCCCccch----------------
Confidence 1233343332222111111 111111111100000 0000001111111111222223333322
Q ss_pred cchHHHHHHHHH-----HHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HHHhhccccCCCcchhHHHHHhh---
Q 000562 614 PNVVRFSRQLLL-----YFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVV-MALGGFIISRDSIPKWWIWGFWV--- 684 (1419)
Q Consensus 614 ~~~~rf~~~~l~-----~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~-~l~~Gf~i~~~~ip~~~~w~~~i--- 684 (1419)
.+||.++.-. .+....+...+..+++.+. +++. ..+.++++. .+...| ++.-.||+
T Consensus 918 --LNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~---vi~~-~~P~fli~~~pl~v~~---------~~~~~~Y~~ts 982 (1381)
T KOG0054|consen 918 --LNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILV---VISY-VTPWFLIAIIPLGVIY---------YFVQRYYLATS 982 (1381)
T ss_pred --hhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHH---HhhH-HhHHHHHHHHHHHHHH---------HHHHHHHHHHh
Confidence 3455554321 1222222222222222211 1111 111111111 111110 11112222
Q ss_pred -----------cHHHHHHHHHHHhhhcCCcccccCCCCCccchHHHhhhcCCCCCCc------chHHH------------
Q 000562 685 -----------SPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESY------WYWIG------------ 735 (1419)
Q Consensus 685 -----------sp~~ya~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~------~~w~~------------ 735 (1419)
||++-.+.... .-.......+.....-.......+.....+ ..|.+
T Consensus 983 ReLkRLesitRSPi~sh~~Etl-----~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~ 1057 (1381)
T KOG0054|consen 983 RELKRLESITRSPIYSHFSETL-----QGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVL 1057 (1381)
T ss_pred HHHHHhhhcccchHHHhHHHHh-----cCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322111110 000000000000000000000001110000 01332
Q ss_pred ------------------HHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHHhhhcCchhhHHHHHhhhcccc
Q 000562 736 ------------------VGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGENVVIELREYLQRSSS 797 (1419)
Q Consensus 736 ------------------~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1419)
+|..+.|++.++....++++-....+... ++.++..+ ......+.+......
T Consensus 1058 ~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m--~SVERv~e--------Y~~~~~E~p~~~~~~ 1127 (1381)
T KOG0054|consen 1058 IAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNM--VSVERVLE--------YTDIPSEAPLEIEES 1127 (1381)
T ss_pred HHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhhHHHH--------HhcCCCCCCCCCcCC
Confidence 22222222222222222222221111110 01111000 000000000000111
Q ss_pred ccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhC
Q 000562 798 LNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAG 877 (1419)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g 877 (1419)
.+++.||..| .+.|+|++..+. ++...+|||||++|+|||++||+|++|||||||.++|.+
T Consensus 1128 ~pp~~WP~~G--------~I~f~~~~~RYr-----------p~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFR 1188 (1381)
T KOG0054|consen 1128 RPPPSWPSKG--------EIEFEDLSLRYR-----------PNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFR 1188 (1381)
T ss_pred CCCCCCCCCC--------eEEEEEeEEEeC-----------CCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHH
Confidence 1334476665 456777655442 123579999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc
Q 000562 878 RKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT 954 (1419)
Q Consensus 878 ~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~ 954 (1419)
... +.+|+|.|||.++.+ ...|++++.+||||.++.+ |+|.|| ++..+..++.+++++|..+|.
T Consensus 1189 l~e--~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsG-TvR~NL----------DPf~e~sD~~IW~ALe~~~Lk 1255 (1381)
T KOG0054|consen 1189 LVE--PAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSG-TVRFNL----------DPFDEYSDDEIWEALERCQLK 1255 (1381)
T ss_pred hcC--ccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecC-cccccc----------CcccccCHHHHHHHHHHhChH
Confidence 876 468999999998765 5678899999999999865 888877 334445566788999988886
Q ss_pred cccC-------CcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecC
Q 000562 955 SLSG-------ALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQ 1027 (1419)
Q Consensus 955 ~~~~-------~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~ 1027 (1419)
+.-. ..+. ++..++|.||||.+|+||||+++++||+|||+|+++|++|...|+++||+-. +++|||++.|+
T Consensus 1256 ~~v~~~p~~Ld~~v~-egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F-~dcTVltIAHR 1333 (1381)
T KOG0054|consen 1256 DVVSSLPGGLDSEVS-EGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEF-KDCTVLTIAHR 1333 (1381)
T ss_pred HHHhhCCcCCCceec-CCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHh-cCCeEEEEeec
Confidence 5443 2232 3456899999999999999999999999999999999999999999999965 58999999999
Q ss_pred CCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 1028 PSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 1028 ~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
.+ ....+|||+||++ |+++.+|++.
T Consensus 1334 l~--TVmd~DrVlVld~-G~v~EfdsP~ 1358 (1381)
T KOG0054|consen 1334 LN--TVMDSDRVLVLDA-GRVVEFDSPA 1358 (1381)
T ss_pred cc--hhhhcCeEEEeeC-CeEeecCChH
Confidence 76 5567899999996 7999999863
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=5.2e-69 Score=722.05 Aligned_cols=209 Identities=29% Similarity=0.430 Sum_probs=183.0
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCccH
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
+.+|+|||+.|++||++||+||||||||||+++|+|... +.+|+|.++|+++.. ...++.+|||+|++.+++.+||
T Consensus 1952 ~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i~~~~~~~r~~IGy~pQ~~~L~~~LTv 2029 (2272)
T TIGR01257 1952 SPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSILTNISDVHQNMGYCPQFDAIDDLLTG 2029 (2272)
T ss_pred ceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEECcchHHHHhhhEEEEeccccCCCCCCH
Confidence 579999999999999999999999999999999999876 468999999988642 2345679999999999999999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+|+|.+.+.++. ...++.++.++++++.++|.+.+|..++ .|||||||||+||+||+.+|+||||||||+||
T Consensus 2030 ~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~~-----~LSGGqKqRLslA~ALi~~P~VLLLDEPTsGL 2101 (2272)
T TIGR01257 2030 REHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLAG-----TYSGGNKRKLSTAIALIGCPPLVLLDEPTTGM 2101 (2272)
T ss_pred HHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCC
Confidence 999998877653 2233445678899999999988887754 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCCchhHHHHHHH
Q 000562 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFE 1066 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~~f~ 1066 (1419)
|+.+++.+++.|++++++|+|||+|+|+++ ++...|||+++|.+ |++++.|+. +++...|.
T Consensus 2102 Dp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs~----q~Lk~~~g 2162 (2272)
T TIGR01257 2102 DPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGTI----QHLKSKFG 2162 (2272)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH----HHHHHHhC
Confidence 999999999999999878999999999986 57788999999985 899999986 45666554
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.5e-66 Score=711.14 Aligned_cols=210 Identities=22% Similarity=0.290 Sum_probs=175.3
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccC
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1419)
.+.|+|+++.++. +...+|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1237 ~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~dI 1303 (1622)
T PLN03130 1237 SIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCDI 1303 (1622)
T ss_pred cEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEec
Confidence 5788888776631 12369999999999999999999999999999999999876 5689999999987
Q ss_pred Cc---ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-------ccCCcccCCC
Q 000562 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-------LSGALIGLPG 965 (1419)
Q Consensus 896 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-------~~~~~~g~~~ 965 (1419)
.+ ..+|+.++||||++.++.+ |+||||.+.. +.+ ++.++++++..++.+ -.|+.+|..
T Consensus 1304 ~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge~- 1371 (1622)
T PLN03130 1304 SKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSEA- 1371 (1622)
T ss_pred ccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCC----HHHHHHHHHHcCcHHHHHhCccccCccccCC-
Confidence 54 4677899999999999876 9999996531 112 334677777776643 345566653
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000562 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1419)
Q Consensus 966 ~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1045 (1419)
..+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1372 G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~- 1447 (1622)
T PLN03130 1372 GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA- 1447 (1622)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC-
Confidence 34799999999999999999999999999999999999999999999975 5899999999975 5677999999985
Q ss_pred CEEEEeCCC
Q 000562 1046 GELIYAGPL 1054 (1419)
Q Consensus 1046 G~~~~~G~~ 1054 (1419)
|+++..|+.
T Consensus 1448 G~IvE~Gt~ 1456 (1622)
T PLN03130 1448 GRVVEFDTP 1456 (1622)
T ss_pred CEEEEeCCH
Confidence 899999986
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.4e-65 Score=702.76 Aligned_cols=210 Identities=21% Similarity=0.287 Sum_probs=175.2
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccC
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1419)
.+.|+|+++.++. +...+|+|+|++|+|||++||+||||||||||+++|.|..+ +.+|+|.|||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEEh
Confidence 5778888776631 22469999999999999999999999999999999999876 5689999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccc-------cCCcccCCC
Q 000562 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1419)
Q Consensus 896 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~~ 965 (1419)
.+ ..+++.++||||++.+++. |++|||.+.. +.+ ++.++++++..++.+. .|+.+|..
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1368 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG- 1368 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC-
Confidence 53 5678899999999999875 9999996421 122 2346777777777543 35556643
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000562 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1419)
Q Consensus 966 ~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1045 (1419)
..+||||||||++|||||+++|+||+||||||+||+.+++.|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1369 G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~- 1444 (1495)
T PLN03232 1369 GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS- 1444 (1495)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999874 5899999999975 5677999999985
Q ss_pred CEEEEeCCC
Q 000562 1046 GELIYAGPL 1054 (1419)
Q Consensus 1046 G~~~~~G~~ 1054 (1419)
|+++..|+.
T Consensus 1445 G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 GQVLEYDSP 1453 (1495)
T ss_pred CEEEEECCH
Confidence 899999985
No 18
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=4.2e-65 Score=604.35 Aligned_cols=474 Identities=26% Similarity=0.324 Sum_probs=357.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC-CCeeeEEEECCccCCCCCC-------CceEEEEccCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1419)
..+++||||++.+||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++|++|++.
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 57999999999999999999999999999999999999876 4568999999997654432 268999999973
Q ss_pred --CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccc
Q 000562 220 --QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1419)
Q Consensus 220 --~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 297 (1419)
+-|-+||.+.|.-..+.++... ..+...++.++|+.+||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 4566888888865544432111 11234457889999999986544
Q ss_pred cccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000562 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1419)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 377 (1419)
+.+.+.|||||||||.||+||+.+|++|++|||||+||+.++.+|++.|+++.++ .++.++.++|+..-+.+++|+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e-~g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRE-LGMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHH-cCcEEEEEcCCHHHHHHhcCe
Confidence 5688899999999999999999999999999999999999999999999999876 467788899999999999999
Q ss_pred EEEEcCCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhch
Q 000562 378 VILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNL 457 (1419)
Q Consensus 378 vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 457 (1419)
|++|++|++++.|+.+++.+- | ..||.. . +
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p-------------------------~hpYT~---~--------------L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------P-------------------------QHPYTR---G--------------L 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------c-------------------------CCcccH---H--------------H
Confidence 999999999999999988531 1 111100 0 0
Q ss_pred HHhhcCccccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCcccccc
Q 000562 458 SEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDG 537 (1419)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~ 537 (1419)
... .|.. +.. ...
T Consensus 255 l~a--~p~~-----------------------------------------------------------~~~---~~~--- 267 (539)
T COG1123 255 LAA--VPRL-----------------------------------------------------------GDE---KII--- 267 (539)
T ss_pred Hhh--CCCc-----------------------------------------------------------ccc---ccc---
Confidence 000 0000 000 000
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchH
Q 000562 538 GLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVV 617 (1419)
Q Consensus 538 ~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~ 617 (1419)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHh
Q 000562 618 RFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVN 697 (1419)
Q Consensus 618 rf~~~~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~n 697 (1419)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCcccccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHHh
Q 000562 698 EFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDR 777 (1419)
Q Consensus 698 ef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 777 (1419)
+.
T Consensus 268 ------~~------------------------------------------------------------------------ 269 (539)
T COG1123 268 ------RL------------------------------------------------------------------------ 269 (539)
T ss_pred ------cc------------------------------------------------------------------------
Confidence 00
Q ss_pred hhcCchhhHHHHHhhhccccccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeE
Q 000562 778 RRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVL 857 (1419)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~ 857 (1419)
.. ... .. ...-++.+|++-.+..+..+. ....+...+++||||.+++||+
T Consensus 270 ---------~~---------~~~---~~-------~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~GE~ 319 (539)
T COG1123 270 ---------PR---------RGP---LR-------AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLREGET 319 (539)
T ss_pred ---------cc---------ccc---cc-------cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecCCCE
Confidence 00 000 00 000111222211111110000 0002346789999999999999
Q ss_pred EEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccC--C---cccccceEEEEccCC--CCCCCccHHHHHHHHhhhc
Q 000562 858 TALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK--R---QETFARISGYCEQND--IHSPGLTVLESLLFSAWLR 930 (1419)
Q Consensus 858 ~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~--~---~~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr 930 (1419)
+||+|+||||||||.++|+|..+ +.+|.|.++|.+. . ....++.+-+++|++ .+.|.+||++.+.-.....
T Consensus 320 lglVGeSGsGKSTlar~i~gL~~--P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~ 397 (539)
T COG1123 320 LGLVGESGSGKSTLARILAGLLP--PSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIH 397 (539)
T ss_pred EEEECCCCCCHHHHHHHHhCCCC--CCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhh
Confidence 99999999999999999999887 4689999999762 1 123445566777765 5779999999998765444
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCcc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHH
Q 000562 931 LPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMR 1009 (1419)
Q Consensus 931 ~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~ 1009 (1419)
... ...++++++.++++.++|.. ..+.. +.+||||||||++|||||+.+|++|++|||||.||+..++.|.+
T Consensus 398 ~~~--~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~Vln 470 (539)
T COG1123 398 GGG--SGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLN 470 (539)
T ss_pred ccc--chHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHH
Confidence 332 24556678999999999985 34433 56899999999999999999999999999999999999999999
Q ss_pred HHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1010 TVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1010 ~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
.|+++.++ |.|.|+++||.+. +...|||++||.+ |+++..||.
T Consensus 471 Ll~~lq~e~g~t~lfISHDl~v-V~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 471 LLKDLQEELGLTYLFISHDLAV-VRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred HHHHHHHHhCCEEEEEeCCHHH-HHhhCceEEEEEC-CeEEEeCCH
Confidence 99999865 9999999999863 6678999999985 899999975
No 19
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.2e-64 Score=689.07 Aligned_cols=210 Identities=20% Similarity=0.241 Sum_probs=175.3
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccC
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1419)
.+.|+|+++.++. +...+|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1284 ~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~dI 1350 (1522)
T TIGR00957 1284 RVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLNI 1350 (1522)
T ss_pred cEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEEc
Confidence 5788888777642 12359999999999999999999999999999999999876 5689999999987
Q ss_pred Cc---ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccc-------cCCcccCCC
Q 000562 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1419)
Q Consensus 896 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~~ 965 (1419)
.+ ..+|+.++||||++.++.+ |+||||.... +.+ ++.++++++..++.+. .|+.+|..
T Consensus 1351 ~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1418 (1522)
T TIGR00957 1351 AKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG- 1418 (1522)
T ss_pred cccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC-
Confidence 54 4678889999999999976 9999995211 122 2346777887777543 35566653
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000562 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1419)
Q Consensus 966 ~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1045 (1419)
..+||||||||+||||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~- 1494 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK- 1494 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999865 5899999999975 5678999999985
Q ss_pred CEEEEeCCC
Q 000562 1046 GELIYAGPL 1054 (1419)
Q Consensus 1046 G~~~~~G~~ 1054 (1419)
|+++..|+.
T Consensus 1495 G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 GEVAEFGAP 1503 (1522)
T ss_pred CEEEEECCH
Confidence 899999986
No 20
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=8.5e-64 Score=677.95 Aligned_cols=216 Identities=20% Similarity=0.325 Sum_probs=176.2
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc-------------
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG------------- 882 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~------------- 882 (1419)
.+.|+|+++.++.. +...+|+|+|++|+||+++||+||||||||||+++|.|...+.
T Consensus 1165 ~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 57888888876421 1246999999999999999999999999999999999976531
Q ss_pred ---------------------------------------eEEEEEEECCccCCc---ccccceEEEEccCCCCCCCccHH
Q 000562 883 ---------------------------------------IIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVL 920 (1419)
Q Consensus 883 ---------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~ 920 (1419)
+.+|+|.+||.++.+ ..+++.+|||+|++.++. .|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccHH
Confidence 148999999998653 567889999999998884 7999
Q ss_pred HHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-------ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-------LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 921 E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-------~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
|||.|+. + +.+. +.++++++..++.+ -.|+.+|..| ..||||||||++|||||+++|+||+||
T Consensus 1314 eNI~~g~----~-~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G-~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1314 ENIKFGK----E-DATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPYG-KSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred HHHhcCC----C-CCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999862 1 2222 23566666665543 4477888544 469999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH-hcCCEEEEEecCCCHHHHHhcCeEEEEecC---CE-EEEeCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIV-NTGRTIVCTIHQPSIDIFESFDELLFMKRG---GE-LIYAGPL 1054 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g---G~-~~~~G~~ 1054 (1419)
||||+||+.+++.|++.|+++. .+++|+|+++|+++ ..+.+|+|++|++| |+ ++..|+.
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 9999999999999999999986 36899999999975 56889999999973 66 5578874
No 21
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-63 Score=619.69 Aligned_cols=460 Identities=22% Similarity=0.330 Sum_probs=345.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1419)
+++|+|||+++++|++++|+|||||||||||++|+|.+++. +.+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 96 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKE 96 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCC
Confidence 36999999999999999999999999999999999998751 248999999998764332 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
+||+||+.++......+. .+ . .+....++++++.+||++..++.++
T Consensus 97 ~tv~e~l~~~~~~~~~~~-~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 142 (506)
T PRK13549 97 LSVLENIFLGNEITPGGI-MD------Y------------------------DAMYLRAQKLLAQLKLDINPATPVG--- 142 (506)
T ss_pred CcHHHHhhhcccccccCC-cC------H------------------------HHHHHHHHHHHHHcCCCCCcccchh---
Confidence 999999988643210000 00 0 0012246778999999877776654
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.+++|+|++|++
T Consensus 143 --~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--~~tvi~~tH~~~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 143 --NLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAH--GIACIYISHKLNEVKAISDTICVIRD 218 (506)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCcHHHHHHhcCEEEEEEC
Confidence 59999999999999999999999999999999999999999999998652 55677789999999999999999999
Q ss_pred CeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhcC
Q 000562 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1419)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 463 (1419)
|++++.|+.+++.. .+ ..+.+
T Consensus 219 G~i~~~~~~~~~~~---------------~~-----------------------------~~~~~--------------- 239 (506)
T PRK13549 219 GRHIGTRPAAGMTE---------------DD-----------------------------IITMM--------------- 239 (506)
T ss_pred CEEeeecccccCCH---------------HH-----------------------------HHHHh---------------
Confidence 99998886433200 00 00000
Q ss_pred ccccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccccchhhHH
Q 000562 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1419)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~ 543 (1419)
.... ..
T Consensus 240 -------------------------------------------------------------~~~~-----~~-------- 245 (506)
T PRK13549 240 -------------------------------------------------------------VGRE-----LT-------- 245 (506)
T ss_pred -------------------------------------------------------------hCcC-----cc--------
Confidence 0000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchHHHHHHH
Q 000562 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1419)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~~~ 623 (1419)
+
T Consensus 246 --------------------------------------------------------------------------~----- 246 (506)
T PRK13549 246 --------------------------------------------------------------------------A----- 246 (506)
T ss_pred --------------------------------------------------------------------------c-----
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCc
Q 000562 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1419)
Q Consensus 624 l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~nef~~~~ 703 (1419)
..|
T Consensus 247 -------------------------------------------------~~~---------------------------- 249 (506)
T PRK13549 247 -------------------------------------------------LYP---------------------------- 249 (506)
T ss_pred -------------------------------------------------ccc----------------------------
Confidence 000
Q ss_pred ccccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHHhhhcCch
Q 000562 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1419)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1419)
. .
T Consensus 250 ------~------------------------------------------------~------------------------ 251 (506)
T PRK13549 250 ------R------------------------------------------------E------------------------ 251 (506)
T ss_pred ------c------------------------------------------------c------------------------
Confidence 0 0
Q ss_pred hhHHHHHhhhccccccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcC
Q 000562 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1419)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~ 863 (1419)
. .. . + ...+.++|+++..+. .+++.+|+|+|++|++||++||+|+
T Consensus 252 ---~-------~~-------~--~------~~~l~~~~l~~~~~~----------~~~~~vl~~vsl~i~~Ge~~~l~G~ 296 (506)
T PRK13549 252 ---P-------HT-------I--G------EVILEVRNLTAWDPV----------NPHIKRVDDVSFSLRRGEILGIAGL 296 (506)
T ss_pred ---c-------cC-------C--C------CceEEEecCcccccc----------ccccccccceeeEEcCCcEEEEeCC
Confidence 0 00 0 0 001233333322100 0124589999999999999999999
Q ss_pred CCCChhHHHHhHhCCCCCceEEEEEEECCccCCc----ccccceEEEEccCC---CCCCCccHHHHHHHHhhhcCCC--C
Q 000562 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRLPS--E 934 (1419)
Q Consensus 864 nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~lr~~~--~ 934 (1419)
||||||||+++|+|..++ +.+|+|.++|.++.. ...++.+||++|++ .+++.+||.|++.+........ .
T Consensus 297 NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 375 (506)
T PRK13549 297 VGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSR 375 (506)
T ss_pred CCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcc
Confidence 999999999999998641 148999999986532 12345689999985 4678899999998753211110 0
Q ss_pred CcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHH
Q 000562 935 IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRN 1013 (1419)
Q Consensus 935 ~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~ 1013 (1419)
....+..+.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|++
T Consensus 376 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~ 450 (506)
T PRK13549 376 IDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQ 450 (506)
T ss_pred cChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHH
Confidence 12233445688999999996 4566554 47999999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 1014 IVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 1014 l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
++++|+|||+++||++ ++.+.||++++|.+ |+++..|+..+
T Consensus 451 l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 451 LVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred HHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 9888999999999986 57788999999985 79999887654
No 22
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=6.2e-63 Score=615.60 Aligned_cols=450 Identities=20% Similarity=0.316 Sum_probs=343.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1419)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 36999999999999999999999999999999999999876 9999999988754321 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
+||+||+.|+..........+ . .+....++++++.+||++..|..++
T Consensus 94 ~tv~e~l~~~~~~~~~~~~~~---~---------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 140 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGRID---W---------------------------KKMYAEADKLLARLNLRFSSDKLVG--- 140 (501)
T ss_pred CcHHHHhhhccccccccCccC---H---------------------------HHHHHHHHHHHHHcCCCCCccCchh---
Confidence 999999988643210000000 0 0012246778999999887776665
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +++|+.++|+.+++.++||+|++|++
T Consensus 141 --~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 141 --ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQ--GRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 59999999999999999999999999999999999999999999998653 55677789999999999999999999
Q ss_pred CeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhcC
Q 000562 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1419)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 463 (1419)
|+++..|+.+++.. .+..+.+
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~~--------------- 237 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEMM--------------- 237 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHHh---------------
Confidence 99998775432100 0000000
Q ss_pred ccccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccccchhhHH
Q 000562 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1419)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~ 543 (1419)
+... .
T Consensus 238 -------------------------------------------------------------~~~~-----~--------- 242 (501)
T PRK10762 238 -------------------------------------------------------------VGRK-----L--------- 242 (501)
T ss_pred -------------------------------------------------------------cCCC-----c---------
Confidence 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchHHHHHHH
Q 000562 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1419)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~~~ 623 (1419)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCc
Q 000562 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1419)
Q Consensus 624 l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~nef~~~~ 703 (1419)
+
T Consensus 243 ---------------------------------------------------~---------------------------- 243 (501)
T PRK10762 243 ---------------------------------------------------E---------------------------- 243 (501)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred ccccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHHhhhcCch
Q 000562 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1419)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1419)
. . .+
T Consensus 244 -----------------------~-~----------------------------~~------------------------ 247 (501)
T PRK10762 244 -----------------------D-Q----------------------------YP------------------------ 247 (501)
T ss_pred -----------------------c-c----------------------------cc------------------------
Confidence 0 0 00
Q ss_pred hhHHHHHhhhccccccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcC
Q 000562 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1419)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~ 863 (1419)
.. . .+. .+..+.++|++ ..+|+|+|+++++||++||+||
T Consensus 248 ---~~------~-------~~~-------~~~~l~~~~l~------------------~~~l~~vsl~i~~Ge~~~liG~ 286 (501)
T PRK10762 248 ---RL------D-------KAP-------GEVRLKVDNLS------------------GPGVNDVSFTLRKGEILGVSGL 286 (501)
T ss_pred ---cc------c-------cCC-------CCcEEEEeCcc------------------cCCcccceEEEcCCcEEEEecC
Confidence 00 0 000 00012333332 1268899999999999999999
Q ss_pred CCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc----cccceEEEEccCC---CCCCCccHHHHHHHHhhhcCC---C
Q 000562 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQND---IHSPGLTVLESLLFSAWLRLP---S 933 (1419)
Q Consensus 864 nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~lr~~---~ 933 (1419)
||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|++ .+++.+||+|++.+....... .
T Consensus 287 NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 364 (501)
T PRK10762 287 MGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGG 364 (501)
T ss_pred CCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhccccc
Confidence 99999999999999865 4589999999875321 2345699999995 467889999999875321100 0
Q ss_pred CCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHH
Q 000562 934 EIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1419)
Q Consensus 934 ~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~ 1012 (1419)
....++.++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+
T Consensus 365 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 439 (501)
T PRK10762 365 SLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLIN 439 (501)
T ss_pred ccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHH
Confidence 012223345688999999994 5666654 4799999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 1013 ~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
+++++|.|||+++|++. ++.+.+|++++|++ |+++..|+..+
T Consensus 440 ~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 440 QFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred HHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 99888999999999986 57788999999985 79999988754
No 23
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-63 Score=618.56 Aligned_cols=458 Identities=19% Similarity=0.291 Sum_probs=344.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1419)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 35999999999999999999999999999999999999775 9999999998765432 2469999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
+||+||+.++..... ..+.. ... + ..+....++++++.+||++..|+.++
T Consensus 95 ~tv~e~l~~~~~~~~--~~~~~-~~~----------~--------------~~~~~~~~~~~l~~~gl~~~~~~~~~--- 144 (510)
T PRK09700 95 LTVLENLYIGRHLTK--KVCGV-NII----------D--------------WREMRVRAAMMLLRVGLKVDLDEKVA--- 144 (510)
T ss_pred CcHHHHhhhcccccc--ccccc-ccc----------C--------------HHHHHHHHHHHHHHcCCCCCcccchh---
Confidence 999999987532100 00000 000 0 00112346778999999887776665
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.+++|+|++|++
T Consensus 145 --~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 145 --NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKE--GTAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 59999999999999999999999999999999999999999999998753 45677799999999999999999999
Q ss_pred CeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhcC
Q 000562 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1419)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 463 (1419)
|++++.|+++++.. .+ ..+..
T Consensus 221 G~i~~~g~~~~~~~---------------~~-----------------------------~~~~~--------------- 241 (510)
T PRK09700 221 GSSVCSGMVSDVSN---------------DD-----------------------------IVRLM--------------- 241 (510)
T ss_pred CEEeeecchhhCCH---------------HH-----------------------------HHHHh---------------
Confidence 99999886543210 00 00000
Q ss_pred ccccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccccchhhHH
Q 000562 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1419)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~ 543 (1419)
.... . .
T Consensus 242 -------------------------------------------------------------~~~~-----~-~------- 247 (510)
T PRK09700 242 -------------------------------------------------------------VGRE-----L-Q------- 247 (510)
T ss_pred -------------------------------------------------------------cCCC-----c-c-------
Confidence 0000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchHHHHHHH
Q 000562 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1419)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~~~ 623 (1419)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCc
Q 000562 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1419)
Q Consensus 624 l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~nef~~~~ 703 (1419)
+ .
T Consensus 248 ----------------------------------------------~---------------------------~----- 249 (510)
T PRK09700 248 ----------------------------------------------N---------------------------R----- 249 (510)
T ss_pred ----------------------------------------------c---------------------------c-----
Confidence 0 0
Q ss_pred ccccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHHhhhcCch
Q 000562 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1419)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1419)
. +. . .+
T Consensus 250 ~----~~--------------~--------------------------------~~------------------------ 255 (510)
T PRK09700 250 F----NA--------------M--------------------------------KE------------------------ 255 (510)
T ss_pred c----cc--------------c--------------------------------cc------------------------
Confidence 0 00 0 00
Q ss_pred hhHHHHHhhhccccccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcC
Q 000562 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1419)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~ 863 (1419)
. .. .+. .+..+.++|++.. + ..+|+|+|+++++||+++|+||
T Consensus 256 ---~-------~~------~~~-------~~~~l~~~~l~~~-------------~--~~~l~~isl~i~~Ge~~~l~G~ 297 (510)
T PRK09700 256 ---N-------VS------NLA-------HETVFEVRNVTSR-------------D--RKKVRDISFSVCRGEILGFAGL 297 (510)
T ss_pred ---c-------cc------cCC-------CCcEEEEeCcccc-------------C--CCcccceeEEEcCCcEEEEECC
Confidence 0 00 000 0001334444321 1 1379999999999999999999
Q ss_pred CCCChhHHHHhHhCCCCCceEEEEEEECCccCCc----ccccceEEEEccC---CCCCCCccHHHHHHHHhhhc---CCC
Q 000562 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQN---DIHSPGLTVLESLLFSAWLR---LPS 933 (1419)
Q Consensus 864 nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---d~~~~~lTv~E~l~f~a~lr---~~~ 933 (1419)
||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|+ ..+++.+||+|++.+....+ ...
T Consensus 298 NGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 375 (510)
T PRK09700 298 VGSGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKG 375 (510)
T ss_pred CCCCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccc
Confidence 99999999999999865 458999999986532 1234568999998 45778999999998753211 000
Q ss_pred --C-CcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHH
Q 000562 934 --E-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMR 1009 (1419)
Q Consensus 934 --~-~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~ 1009 (1419)
. ......++.++++++.+++. +..+..+ ..|||||||||.||++|+.+|+||+|||||+|||+.++..+++
T Consensus 376 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~ 450 (510)
T PRK09700 376 AMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYK 450 (510)
T ss_pred cccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHH
Confidence 0 11222335678899999996 6666654 4799999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1010 TVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1010 ~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
.|++++++|.|||+++||+. .+.+.+|++++|++ |+++..++.
T Consensus 451 ~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 451 VMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred HHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 99999888999999999986 57788999999986 788888765
No 24
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-62 Score=625.42 Aligned_cols=488 Identities=20% Similarity=0.242 Sum_probs=348.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCC----------CCC-------CCce
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFK----------EFV-------PPRT 210 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~----------~~~-------~~~~ 210 (1419)
.++|+|||+++++||+++|+||||||||||+++|+|.++|. +|+|.++|..+. ... .++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999775 899999986431 111 1246
Q ss_pred EEEEccCC--CCCCCCCHHHHHHHhhhhc-CCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHH
Q 000562 211 SAYVSQQD--WQVAEMTVRETLDFAGQCQ-GVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 287 (1419)
Q Consensus 211 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~ 287 (1419)
++||+|++ .+++.+||+||+.++.+.. +.. + .+...+++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------R------------------------EEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHH
Confidence 99999997 5778899999999875431 110 0 011234678899
Q ss_pred HhCCcc---cccccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEE
Q 000562 288 ILGLDT---CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISL 364 (1419)
Q Consensus 288 ~lgL~~---~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i 364 (1419)
.+||++ ..+.. +..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.++++++.. +++|+.+
T Consensus 152 ~~gL~~~~~~~~~~-----~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~-g~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILSRY-----PHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM-SMGVIFI 225 (623)
T ss_pred HCCCCChhhHHhCC-----CccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 999964 23444 45699999999999999999999999999999999999999999999987643 4567779
Q ss_pred ecChhHHHhhcCeEEEEcCCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHH
Q 000562 365 LQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKF 444 (1419)
Q Consensus 365 ~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~ 444 (1419)
+|+..++.+++|+|++|++|++++.|+++++.. .|.+....+++..
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~~~-------------------------- 271 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALLAA-------------------------- 271 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhhhc--------------------------
Confidence 999999999999999999999999998766521 0000000000000
Q ss_pred HHHHHhchhhhchHHhhcCccccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhh
Q 000562 445 AEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVF 524 (1419)
Q Consensus 445 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf 524 (1419)
.+
T Consensus 272 ------------------~~------------------------------------------------------------ 273 (623)
T PRK10261 272 ------------------VP------------------------------------------------------------ 273 (623)
T ss_pred ------------------cC------------------------------------------------------------
Confidence 00
Q ss_pred cccCCCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHh
Q 000562 525 FRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVA 604 (1419)
Q Consensus 525 ~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~ 604 (1419)
+.. .... +. .|
T Consensus 274 -~~~----~~~~------------------------------------~~-----------------~~----------- 284 (623)
T PRK10261 274 -QLG----AMKG------------------------------------LD-----------------YP----------- 284 (623)
T ss_pred -ccc----cccc------------------------------------cc-----------------CC-----------
Confidence 000 0000 00 00
Q ss_pred hhhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhh
Q 000562 605 VTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWV 684 (1419)
Q Consensus 605 i~Y~~~G~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~i 684 (1419)
. ..|.
T Consensus 285 ------------------------------------------------------------------~-~~~~-------- 289 (623)
T PRK10261 285 ------------------------------------------------------------------R-RFPL-------- 289 (623)
T ss_pred ------------------------------------------------------------------c-cccc--------
Confidence 0 0000
Q ss_pred cHHHHHHHHHHHhhhcCCcccccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 000562 685 SPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQ 764 (1419)
Q Consensus 685 sp~~ya~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~ 764 (1419)
. ... .+. ...
T Consensus 290 ---------------~---~~~-~~~-------------------------------------------------~~~-- 299 (623)
T PRK10261 290 ---------------I---SLE-HPA-------------------------------------------------KQE-- 299 (623)
T ss_pred ---------------c---ccc-ccc-------------------------------------------------ccC--
Confidence 0 000 000 000
Q ss_pred cccchhhhhhHHhhhcCchhhHHHHHhhhccccccccccccCCcccccccceeEeccceeeeecccccccccccccceee
Q 000562 765 AVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQL 844 (1419)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 844 (1419)
. . ... . . .+. + ..-+..+|+++........ .........+
T Consensus 300 ---~--------------~---~~~-----~----~--~~~-~------~~~L~~~~l~~~y~~~~~~--~~~~~~~~~~ 339 (623)
T PRK10261 300 ---P--------------P---IEQ-----D----T--VVD-G------EPILQVRNLVTRFPLRSGL--LNRVTREVHA 339 (623)
T ss_pred ---c--------------c---ccc-----c----c--ccC-C------CceEEEeeeEEEEcCCCcc--ccccCCceEE
Confidence 0 0 000 0 0 000 0 0124555555443210000 0000012469
Q ss_pred eeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEEEccCC--CCCCC
Q 000562 845 LVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IHSPG 916 (1419)
Q Consensus 845 L~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d--~~~~~ 916 (1419)
|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++ .+++.
T Consensus 340 l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~ 417 (623)
T PRK10261 340 VEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPR 417 (623)
T ss_pred EeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCC
Confidence 999999999999999999999999999999999876 458999999986532 12356799999986 57889
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
+||.|++.+....+. ....++.++.+.++++.++|. +..+.. +..|||||||||+|||+|+.+|+|||||||
T Consensus 418 ~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGqrQRv~iAraL~~~p~llllDEP 490 (623)
T PRK10261 418 QTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQRQRICIARALALNPKVIIADEA 490 (623)
T ss_pred CCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 999999987654321 112334456788999999995 455554 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|+|||+.++..+++.|++++++ |.|||++|||++ .+...+|++++|.+ |++++.|+..
T Consensus 491 ts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~~ 549 (623)
T PRK10261 491 VSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPRR 549 (623)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 9999999999999999999765 899999999986 47788999999985 7999999853
No 25
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=7.2e-62 Score=664.65 Aligned_cols=210 Identities=21% Similarity=0.261 Sum_probs=175.6
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccC
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1419)
.+.|+|+++.++. +...+|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.+||.++
T Consensus 1308 ~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~di 1374 (1560)
T PTZ00243 1308 SLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGREI 1374 (1560)
T ss_pred eEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEc
Confidence 5778888776631 22459999999999999999999999999999999999876 5689999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccc-------cCCcccCCC
Q 000562 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1419)
Q Consensus 896 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~~ 965 (1419)
.. ..+++.+|||||++.++.. |++|||... .+.+ ++.++++++..++.+. .|+.+|..
T Consensus 1375 ~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~- 1442 (1560)
T PTZ00243 1375 GAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG- 1442 (1560)
T ss_pred ccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC-
Confidence 53 5678899999999999875 999999531 1222 3457888888887653 35566653
Q ss_pred CCCCCHHHHHHHHHHHHHhhC-CCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000562 966 INGLSTEQRKRLTIAVELVAN-PSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 1044 (1419)
Q Consensus 966 ~~~lSgGqrqrl~iA~~L~~~-p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1044 (1419)
..+||||||||++|||||+++ |+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1443 G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd~ 1519 (1560)
T PTZ00243 1443 GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMDH 1519 (1560)
T ss_pred cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEEC
Confidence 357999999999999999996 89999999999999999999999999864 4899999999964 6788999999985
Q ss_pred CCEEEEeCCC
Q 000562 1045 GGELIYAGPL 1054 (1419)
Q Consensus 1045 gG~~~~~G~~ 1054 (1419)
|+++..|+.
T Consensus 1520 -G~VvE~Gt~ 1528 (1560)
T PTZ00243 1520 -GAVAEMGSP 1528 (1560)
T ss_pred -CEEEEECCH
Confidence 899999985
No 26
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4e-62 Score=612.33 Aligned_cols=464 Identities=22% Similarity=0.300 Sum_probs=342.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCCCCC-------CceEEEEccCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFVP-------PRTSAYVSQQD 218 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 218 (1419)
+++|+|+|+.+++||+++|+|||||||||||++|+|.+++. .+.+|+|.++|+++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 46999999999999999999999999999999999998752 1258999999998754321 24699999996
Q ss_pred C--CCCCCCHHHHHHHhhhhc-CCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcc--
Q 000562 219 W--QVAEMTVRETLDFAGQCQ-GVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-- 293 (1419)
Q Consensus 219 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~-- 293 (1419)
. +.+.+||+|++.+..... +.. + .+...+++++++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------R------------------------EAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHCCCCChH
Confidence 4 567789999987643211 100 0 011234678899999975
Q ss_pred -cccccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHH
Q 000562 294 -CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAY 372 (1419)
Q Consensus 294 -~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~ 372 (1419)
..|+.+ ..|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++++.. +.+|+.++|+..++.
T Consensus 148 ~~~~~~~-----~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDYP-----HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQEL-NMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhCC-----cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhc-CCeEEEEcCcHHHHH
Confidence 235544 4699999999999999999999999999999999999999999999987543 456777899999999
Q ss_pred hhcCeEEEEcCCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhch
Q 000562 373 ELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYH 452 (1419)
Q Consensus 373 ~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (1419)
+++|+|++|++|++++.|+++++... |.. ...
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~~---------------------------------~~~------- 253 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PTH---------------------------------PYT------- 253 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CCC---------------------------------HHH-------
Confidence 99999999999999999876554210 000 000
Q ss_pred hhhchHHhhcCccccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCc
Q 000562 453 TGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHK 532 (1419)
Q Consensus 453 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~ 532 (1419)
+.+. ...
T Consensus 254 -----------------------------------------~~~~----------------------------~~~---- 260 (529)
T PRK15134 254 -----------------------------------------QKLL----------------------------NSE---- 260 (529)
T ss_pred -----------------------------------------HHHH----------------------------HhC----
Confidence 0000 000
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccc
Q 000562 533 TIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGY 612 (1419)
Q Consensus 533 ~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~ 612 (1419)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHH
Q 000562 613 DPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQN 692 (1419)
Q Consensus 613 ~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~ 692 (1419)
+
T Consensus 261 --------------------------------------------------------------~----------------- 261 (529)
T PRK15134 261 --------------------------------------------------------------P----------------- 261 (529)
T ss_pred --------------------------------------------------------------c-----------------
Confidence 0
Q ss_pred HHHHhhhcCCcccccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhh
Q 000562 693 AASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKEL 772 (1419)
Q Consensus 693 al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~ 772 (1419)
. . .+.
T Consensus 262 -----------------~-----~-----------------------------------------~~~------------ 266 (529)
T PRK15134 262 -----------------S-----G-----------------------------------------DPV------------ 266 (529)
T ss_pred -----------------c-----c-----------------------------------------ccc------------
Confidence 0 0 000
Q ss_pred hhHHhhhcCchhhHHHHHhhhccccccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEE
Q 000562 773 QERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAF 852 (1419)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i 852 (1419)
. .. . . .. ..+.++|+++..+...+. .+...+.+.+|+|||+++
T Consensus 267 --------------~-------~~---~---~-~~-------~~l~~~~l~~~~~~~~~~--~~~~~~~~~il~~isl~i 309 (529)
T PRK15134 267 --------------P-------LP---E---P-AS-------PLLDVEQLQVAFPIRKGI--LKRTVDHNVVVKNISFTL 309 (529)
T ss_pred --------------c-------cC---C---C-CC-------CcccccCcEEEeecCccc--cccccccceeeecceeEE
Confidence 0 00 0 0 00 002223333222100000 000001246999999999
Q ss_pred eCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc------cccceEEEEccCC--CCCCCccHHHHHH
Q 000562 853 RPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQND--IHSPGLTVLESLL 924 (1419)
Q Consensus 853 ~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~d--~~~~~lTv~E~l~ 924 (1419)
++||++||+||||||||||+++|+|..+ .+|+|.++|.++... .+++.+||++|++ .+++.+||+|++.
T Consensus 310 ~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~ 386 (529)
T PRK15134 310 RPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIE 386 (529)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHH
Confidence 9999999999999999999999999863 479999999865321 1345689999996 4778899999998
Q ss_pred HHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHH
Q 000562 925 FSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARA 1003 (1419)
Q Consensus 925 f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~ 1003 (1419)
+....+.. .....+.++.++++++.+++. +..+.. +..|||||||||+||++|+.+|++|+|||||+|||+.+
T Consensus 387 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~ 460 (529)
T PRK15134 387 EGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTV 460 (529)
T ss_pred HHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHH
Confidence 86543211 122233446688999999996 355554 35799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1004 AAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1004 ~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+..+++.|++++++ |+|||+++|++. .+.+.+|++++|++ |+++..|+.
T Consensus 461 ~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 461 QAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 99999999999865 899999999986 46778999999985 799998874
No 27
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.1e-62 Score=609.54 Aligned_cols=452 Identities=20% Similarity=0.278 Sum_probs=341.0
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 224 (1419)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 25 ~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 101 (510)
T PRK15439 25 EVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPNL 101 (510)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCCC
Confidence 5999999999999999999999999999999999999776 9999999988764332 24689999999889999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||+||+.|+... .+ +....++++++.+||++..+..++
T Consensus 102 tv~e~l~~~~~~------~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~---- 139 (510)
T PRK15439 102 SVKENILFGLPK------RQ--------------------------------ASMQKMKQLLAALGCQLDLDSSAG---- 139 (510)
T ss_pred cHHHHhhccccc------ch--------------------------------HHHHHHHHHHHHcCCCccccCChh----
Confidence 999999875310 00 001235678999999887776665
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +++|+.++|+..++.++||+|++|++|
T Consensus 140 -~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tiiivtHd~~~~~~~~d~i~~l~~G 216 (510)
T PRK15439 140 -SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQ--GVGIVFISHKLPEIRQLADRISVMRDG 216 (510)
T ss_pred -hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 59999999999999999999999999999999999999999999998753 556777999999999999999999999
Q ss_pred eEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhcCc
Q 000562 385 QIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVP 464 (1419)
Q Consensus 385 ~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 464 (1419)
++++.|+.+++... +.. +.+.
T Consensus 217 ~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~--------------- 237 (510)
T PRK15439 217 TIALSGKTADLSTD---------------DII-----------------------------QAIT--------------- 237 (510)
T ss_pred EEEEecChHHcCHH---------------HHH-----------------------------HHHh---------------
Confidence 99999876543110 000 0000
Q ss_pred cccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccccchhhHHH
Q 000562 465 FDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGAL 544 (1419)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~l 544 (1419)
.... ......
T Consensus 238 -------------------------------------------------------------~~~~-~~~~~~-------- 247 (510)
T PRK15439 238 -------------------------------------------------------------PAAR-EKSLSA-------- 247 (510)
T ss_pred -------------------------------------------------------------Cccc-cccccc--------
Confidence 0000 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchHHHHHHHH
Q 000562 545 YFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLL 624 (1419)
Q Consensus 545 f~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~~~l 624 (1419)
..
T Consensus 248 ----------------------------~~-------------------------------------------------- 249 (510)
T PRK15439 248 ----------------------------SQ-------------------------------------------------- 249 (510)
T ss_pred ----------------------------cc--------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCcc
Q 000562 625 LYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSW 704 (1419)
Q Consensus 625 ~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~nef~~~~~ 704 (1419)
..
T Consensus 250 ------------------------------------------------------------------------------~~ 251 (510)
T PRK15439 250 ------------------------------------------------------------------------------KL 251 (510)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred cccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHHhhhcCchh
Q 000562 705 DKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGENV 784 (1419)
Q Consensus 705 ~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1419)
. ..+ +
T Consensus 252 ~-----------------~~~---------------------------------~------------------------- 256 (510)
T PRK15439 252 W-----------------LEL---------------------------------P------------------------- 256 (510)
T ss_pred c-----------------ccc---------------------------------c-------------------------
Confidence 0 000 0
Q ss_pred hHHHHHhhhccccccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCC
Q 000562 785 VIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVS 864 (1419)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~n 864 (1419)
. ... . .+. + +..+..+|++. .+|+|||+++++||++||+|||
T Consensus 257 --~-------~~~-~---~~~-~------~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l~G~N 298 (510)
T PRK15439 257 --G-------NRR-Q---QAA-G------APVLTVEDLTG------------------EGFRNISLEVRAGEILGLAGVV 298 (510)
T ss_pred --c-------ccc-c---cCC-C------CceEEEeCCCC------------------CCccceeEEEcCCcEEEEECCC
Confidence 0 000 0 000 0 00133344320 1488999999999999999999
Q ss_pred CCChhHHHHhHhCCCCCceEEEEEEECCccCCcc----cccceEEEEccCC---CCCCCccHHHHHHHHhhhcCCCCCcH
Q 000562 865 GAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQND---IHSPGLTVLESLLFSAWLRLPSEIEL 937 (1419)
Q Consensus 865 GaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~lr~~~~~~~ 937 (1419)
|||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++......+.+.....
T Consensus 299 GsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~ 376 (510)
T PRK15439 299 GAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKP 376 (510)
T ss_pred CCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccCh
Confidence 9999999999999865 4589999999865321 1235689999984 47788999999864211111110111
Q ss_pred HHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHh
Q 000562 938 ETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVN 1016 (1419)
Q Consensus 938 ~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~ 1016 (1419)
...++.++++++.+++. +..+..+ +.|||||||||+||++|+.+|+||||||||+|||+.+...+.+.|+++++
T Consensus 377 ~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~ 451 (510)
T PRK15439 377 ARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAA 451 (510)
T ss_pred HHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHh
Confidence 22345678999999996 5666654 47999999999999999999999999999999999999999999999988
Q ss_pred cCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 1017 TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 1017 ~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
+|.|||+++||++ ++.+.+|++++|++ |+++..|..+
T Consensus 452 ~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 452 QNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred CCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 8999999999986 57788999999985 7999888654
No 28
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=7.8e-61 Score=654.69 Aligned_cols=209 Identities=20% Similarity=0.253 Sum_probs=175.2
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccC
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1419)
.+.|+|+++.++. +...+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.|||.++
T Consensus 1217 ~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~di 1282 (1490)
T TIGR01271 1217 QMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVSW 1282 (1490)
T ss_pred eEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEc
Confidence 5778888777642 23569999999999999999999999999999999999864 479999999987
Q ss_pred Cc---ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccc-------cCCcccCCC
Q 000562 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1419)
Q Consensus 896 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~~ 965 (1419)
.+ ..+++.++||||++.++++ |+||||.... .. .++.++++++.++|.+. .|+.+|..
T Consensus 1283 ~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~~----tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~- 1350 (1490)
T TIGR01271 1283 NSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------QW----SDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDG- 1350 (1490)
T ss_pred ccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------CC----CHHHHHHHHHHCCCHHHHHhCccccccccccC-
Confidence 54 4577899999999999976 9999994311 11 23457888888887543 35566643
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000562 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1419)
Q Consensus 966 ~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1045 (1419)
..+||||||||+||||||+++|+||+||||||+||..+...|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1351 G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~- 1426 (1490)
T TIGR01271 1351 GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG- 1426 (1490)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999865 4799999999975 5677999999985
Q ss_pred CEEEEeCCC
Q 000562 1046 GELIYAGPL 1054 (1419)
Q Consensus 1046 G~~~~~G~~ 1054 (1419)
|+++..|++
T Consensus 1427 G~ivE~g~p 1435 (1490)
T TIGR01271 1427 SSVKQYDSI 1435 (1490)
T ss_pred CEEEEeCCH
Confidence 799999875
No 29
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=8.3e-62 Score=606.27 Aligned_cols=460 Identities=20% Similarity=0.304 Sum_probs=341.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1419)
+++|+|||+++++|++++|+|||||||||||++|+|.+++. +.+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 36999999999999999999999999999999999998652 248999999998765332 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccc-cccccCc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA-DTLVGDE 302 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-dt~vg~~ 302 (1419)
+||+||+.++..........+ . .+...+++.+++.+||++.. ++.+
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRMA------Y------------------------NAMYLRAKNLLRELQLDADNVTRPV--- 139 (500)
T ss_pred CcHHHHHHhhccccccccccC------H------------------------HHHHHHHHHHHHHcCCCCCcccCch---
Confidence 999999988643210000000 0 00122467789999998654 3444
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
..|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++. +++|+.++|+..++.++||+|++|+
T Consensus 140 --~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tviiitHd~~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 140 --GDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAH--GVACVYISHKLNEVKAVCDTICVIR 215 (500)
T ss_pred --hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeCcHHHHHHhCCEEEEEe
Confidence 469999999999999999999999999999999999999999999998753 5567779999999999999999999
Q ss_pred CCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhc
Q 000562 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELA 462 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 462 (1419)
+|++++.|+.+++.. ....+.
T Consensus 216 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 236 (500)
T TIGR02633 216 DGQHVATKDMSTMSE--------------------------------------------DDIITM--------------- 236 (500)
T ss_pred CCeEeeecCcccCCH--------------------------------------------HHHHHH---------------
Confidence 999987764321000 000000
Q ss_pred CccccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccccchhhH
Q 000562 463 VPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLG 542 (1419)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g 542 (1419)
+...
T Consensus 237 -------------------------------------------------------------~~~~--------------- 240 (500)
T TIGR02633 237 -------------------------------------------------------------MVGR--------------- 240 (500)
T ss_pred -------------------------------------------------------------HhCc---------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchHHHHHH
Q 000562 543 ALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQ 622 (1419)
Q Consensus 543 ~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~~ 622 (1419)
+
T Consensus 241 --------------------------------------------------~----------------------------- 241 (500)
T TIGR02633 241 --------------------------------------------------E----------------------------- 241 (500)
T ss_pred --------------------------------------------------c-----------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCC
Q 000562 623 LLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGH 702 (1419)
Q Consensus 623 ~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~nef~~~ 702 (1419)
.+
T Consensus 242 ---------------------------------------------------~~--------------------------- 243 (500)
T TIGR02633 242 ---------------------------------------------------IT--------------------------- 243 (500)
T ss_pred ---------------------------------------------------cc---------------------------
Confidence 00
Q ss_pred cccccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHHhhhcCc
Q 000562 703 SWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGE 782 (1419)
Q Consensus 703 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (1419)
. .. +
T Consensus 244 -------~--------------~~--------------------------------~----------------------- 247 (500)
T TIGR02633 244 -------S--------------LY--------------------------------P----------------------- 247 (500)
T ss_pred -------c--------------cc--------------------------------c-----------------------
Confidence 0 00 0
Q ss_pred hhhHHHHHhhhccccccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEc
Q 000562 783 NVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVG 862 (1419)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G 862 (1419)
. .. .+.. +..+.++|+++.... .+++.+|+|+|+++++||++||+|
T Consensus 248 ----~-------~~------~~~~-------~~~l~~~~l~~~~~~----------~~~~~~l~~is~~i~~Ge~~~l~G 293 (500)
T TIGR02633 248 ----H-------EP------HEIG-------DVILEARNLTCWDVI----------NPHRKRVDDVSFSLRRGEILGVAG 293 (500)
T ss_pred ----c-------cc------cCCC-------CceEEEeCCcccccc----------cccccccccceeEEeCCcEEEEeC
Confidence 0 00 0000 001233343322100 012458999999999999999999
Q ss_pred CCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc----ccccceEEEEccCC---CCCCCccHHHHHHHHhh--hcCCC
Q 000562 863 VSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAW--LRLPS 933 (1419)
Q Consensus 863 ~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~--lr~~~ 933 (1419)
||||||||||++|+|..++ +.+|+|.++|.++.. ...++.+||++|+. .+++.+||+|++.++.. .....
T Consensus 294 ~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~ 372 (500)
T TIGR02633 294 LVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKM 372 (500)
T ss_pred CCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCC
Confidence 9999999999999998652 147999999987532 12356789999995 47889999999987532 11000
Q ss_pred CCcHHHHHHHHHHHHHHcCCcc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHH
Q 000562 934 EIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1419)
Q Consensus 934 ~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~ 1012 (1419)
.......++.++++++.+++.+ ..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+
T Consensus 373 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 447 (500)
T TIGR02633 373 RIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLIN 447 (500)
T ss_pred cCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHH
Confidence 1122333456889999999964 455544 4799999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 1013 ~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
+++++|.|||+++||++ ++.+.+|++++|.+ |+++..++..
T Consensus 448 ~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 448 QLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred HHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 99888999999999986 57788999999985 7888877653
No 30
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-62 Score=605.41 Aligned_cols=450 Identities=20% Similarity=0.290 Sum_probs=340.7
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC----CCceEEEEccCCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~l 224 (1419)
++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|+++.... .++.++|++|++.+++.+
T Consensus 18 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (501)
T PRK11288 18 KALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPEM 94 (501)
T ss_pred EEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCCC
Confidence 5999999999999999999999999999999999998775 999999998875432 135799999999889999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||+||+.++......+. .+ . .+....++.+++.+||++..+..++
T Consensus 95 tv~~~l~~~~~~~~~~~-~~---~---------------------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 139 (501)
T PRK11288 95 TVAENLYLGQLPHKGGI-VN---R---------------------------RLLNYEAREQLEHLGVDIDPDTPLK---- 139 (501)
T ss_pred CHHHHHHhcccccccCC-CC---H---------------------------HHHHHHHHHHHHHcCCCCCcCCchh----
Confidence 99999988532100000 00 0 0012246778999999876665554
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
.|||||||||+|||+|+.+|++++|||||+|||+.++.++.+.|+++++. +++|+.++|+..++.+++|+|++|++|
T Consensus 140 -~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tiiiitHd~~~~~~~~d~i~~l~~G 216 (501)
T PRK11288 140 -YLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAE--GRVILYVSHRMEEIFALCDAITVFKDG 216 (501)
T ss_pred -hCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 69999999999999999999999999999999999999999999998653 566777999999999999999999999
Q ss_pred eEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhcCc
Q 000562 385 QIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVP 464 (1419)
Q Consensus 385 ~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 464 (1419)
+++..++..+. .+.++..+.
T Consensus 217 ~i~~~~~~~~~-------------------------------------------~~~~~~~~~----------------- 236 (501)
T PRK11288 217 RYVATFDDMAQ-------------------------------------------VDRDQLVQA----------------- 236 (501)
T ss_pred EEEeecCcccc-------------------------------------------CCHHHHHHH-----------------
Confidence 99865421000 000000000
Q ss_pred cccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccccchhhHHH
Q 000562 465 FDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGAL 544 (1419)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~l 544 (1419)
+.... .
T Consensus 237 -----------------------------------------------------------~~~~~-----~---------- 242 (501)
T PRK11288 237 -----------------------------------------------------------MVGRE-----I---------- 242 (501)
T ss_pred -----------------------------------------------------------hcCCC-----c----------
Confidence 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchHHHHHHHH
Q 000562 545 YFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLL 624 (1419)
Q Consensus 545 f~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~~~l 624 (1419)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCcc
Q 000562 625 LYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSW 704 (1419)
Q Consensus 625 ~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~nef~~~~~ 704 (1419)
.
T Consensus 243 --------------------------------------------------~----------------------------- 243 (501)
T PRK11288 243 --------------------------------------------------G----------------------------- 243 (501)
T ss_pred --------------------------------------------------c-----------------------------
Confidence 0
Q ss_pred cccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHHhhhcCchh
Q 000562 705 DKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGENV 784 (1419)
Q Consensus 705 ~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1419)
. . ..
T Consensus 244 -----~--------------~--------------------------------~~------------------------- 247 (501)
T PRK11288 244 -----D--------------I--------------------------------YG------------------------- 247 (501)
T ss_pred -----c--------------c--------------------------------cc-------------------------
Confidence 0 0 00
Q ss_pred hHHHHHhhhccccccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCC
Q 000562 785 VIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVS 864 (1419)
Q Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~n 864 (1419)
.. .. +. .+..+.++|+++ ..+++|+|+++++||++||+|||
T Consensus 248 --~~------~~-------~~-------~~~~l~~~~~~~-----------------~~~l~~isl~i~~Ge~~~iiG~N 288 (501)
T PRK11288 248 --YR------PR-------PL-------GEVRLRLDGLKG-----------------PGLREPISFSVRAGEIVGLFGLV 288 (501)
T ss_pred --cc------cc-------CC-------CCcEEEEecccc-----------------CCcccceeEEEeCCcEEEEEcCC
Confidence 00 00 00 001233333321 13789999999999999999999
Q ss_pred CCChhHHHHhHhCCCCCceEEEEEEECCccCCc----ccccceEEEEccCC---CCCCCccHHHHHHHHhhhcC-CCC--
Q 000562 865 GAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRL-PSE-- 934 (1419)
Q Consensus 865 GaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~lr~-~~~-- 934 (1419)
|||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++ .+++.+|+.|++.+...... +..
T Consensus 289 GsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~ 366 (501)
T PRK11288 289 GAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCL 366 (501)
T ss_pred CCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccc
Confidence 9999999999999865 468999999986532 12345789999985 47888999999987532211 000
Q ss_pred CcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHH
Q 000562 935 IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRN 1013 (1419)
Q Consensus 935 ~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~ 1013 (1419)
......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|++|||||||+|||+.+...+++.|++
T Consensus 367 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~ 441 (501)
T PRK11288 367 INNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYE 441 (501)
T ss_pred cChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHH
Confidence 01222345678899999994 5666654 47999999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 1014 IVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 1014 l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
++++|.|||+++||++ ++.+.+|++++|.+ |++++.|..++
T Consensus 442 l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 482 (501)
T PRK11288 442 LAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQ 482 (501)
T ss_pred HHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 9888999999999986 57788999999985 79999998764
No 31
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.2e-61 Score=607.27 Aligned_cols=445 Identities=22% Similarity=0.275 Sum_probs=337.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCc--CCCCCeeeEEEECC-----------------------ccC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL--GHHLQVSGKITYNG-----------------------HGF 202 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l--~~~~~~~G~I~~~G-----------------------~~~ 202 (1419)
+++|+|+|+.+.+|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 36999999999999999999999999999999999986 454 89999972 211
Q ss_pred C-------CC------CCCceEEEEccC-CCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHH
Q 000562 203 K-------EF------VPPRTSAYVSQQ-DWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFM 268 (1419)
Q Consensus 203 ~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~ 268 (1419)
. .. ..++.++|++|+ +.+++.+||+||+.|+....+...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~--------------------------- 142 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEG--------------------------- 142 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCH---------------------------
Confidence 0 00 013568999997 677888999999988643221100
Q ss_pred HHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHH
Q 000562 269 KSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKY 348 (1419)
Q Consensus 269 ~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~ 348 (1419)
.+...+++++++.+||++..+..+ +.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.
T Consensus 143 -------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 210 (520)
T TIGR03269 143 -------KEAVGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA 210 (520)
T ss_pred -------HHHHHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH
Confidence 001234678899999987766555 46999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCccccccc
Q 000562 349 LKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQY 428 (1419)
Q Consensus 349 l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~ 428 (1419)
|+++++.. +++|++++|+...+.++||+|++|++|++++.|+++++.+.+.. .
T Consensus 211 l~~l~~~~-g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~----------------~---------- 263 (520)
T TIGR03269 211 LEEAVKAS-GISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFME----------------G---------- 263 (520)
T ss_pred HHHHHHhc-CcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHHh----------------h----------
Confidence 99986543 45677799999999999999999999999988765432110000 0
Q ss_pred ccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhcCccccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHH
Q 000562 429 WSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVF 508 (1419)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~ 508 (1419)
T Consensus 264 -------------------------------------------------------------------------------- 263 (520)
T TIGR03269 264 -------------------------------------------------------------------------------- 263 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHH
Q 000562 509 KFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSW 588 (1419)
Q Consensus 509 ~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~ 588 (1419)
.. .
T Consensus 264 ------------------~~----~------------------------------------------------------- 266 (520)
T TIGR03269 264 ------------------VS----E------------------------------------------------------- 266 (520)
T ss_pred ------------------ch----h-------------------------------------------------------
Confidence 00 0
Q ss_pred HHHhhHHHHHHHHHHhhhhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhcc
Q 000562 589 ALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFI 668 (1419)
Q Consensus 589 ~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~ 668 (1419)
T Consensus 267 -------------------------------------------------------------------------------- 266 (520)
T TIGR03269 267 -------------------------------------------------------------------------------- 266 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCCcccccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHH
Q 000562 669 ISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNA 748 (1419)
Q Consensus 669 i~~~~ip~~~~w~~~isp~~ya~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~ 748 (1419)
+
T Consensus 267 -----~-------------------------------------------------------------------------- 267 (520)
T TIGR03269 267 -----V-------------------------------------------------------------------------- 267 (520)
T ss_pred -----h--------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHhcCCCCCcccccchhhhhhHHhhhcCchhhHHHHHhhhccccccccccccCCcccccccceeEeccceeeeec
Q 000562 749 LFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDV 828 (1419)
Q Consensus 749 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (1419)
... . . . +. ....+.++|+++.++.
T Consensus 268 ------------~~~----~------------------~-------~--------~~-------~~~~l~~~~l~~~~~~ 291 (520)
T TIGR03269 268 ------------EKE----C------------------E-------V--------EV-------GEPIIKVRNVSKRYIS 291 (520)
T ss_pred ------------ccc----c------------------c-------c--------CC-------CCceEEEeccEEEecc
Confidence 000 0 0 0 00 0001333444433310
Q ss_pred ccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEEC-Ccc---CCc------c
Q 000562 829 PVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYIS-GYP---KRQ------E 898 (1419)
Q Consensus 829 ~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~-g~~---~~~------~ 898 (1419)
. ..+.+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++ |.+ ... .
T Consensus 292 ~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~~~~~~~~~~~~~ 361 (520)
T TIGR03269 292 V--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEWVDMTKPGPDGRG 361 (520)
T ss_pred C--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCccccccccchhhHH
Confidence 0 0122469999999999999999999999999999999999865 458999996 532 111 1
Q ss_pred cccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-----ccCCcccCCCCCCCCHHH
Q 000562 899 TFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-----LSGALIGLPGINGLSTEQ 973 (1419)
Q Consensus 899 ~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-----~~~~~~g~~~~~~lSgGq 973 (1419)
..++.+||++|++.+++.+||+|++.+...+. ...+..++.++++++.++|.+ ..+.. +..|||||
T Consensus 362 ~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LSgGq 432 (520)
T TIGR03269 362 RAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELSEGE 432 (520)
T ss_pred HHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCCHHH
Confidence 23456899999988889999999998754321 122223456788999999975 33443 35799999
Q ss_pred HHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 974 RKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 974 rqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
||||+||++|+.+|+||+|||||+|||+.+...+++.|++++++ |.|||+++|+++ .+.+.+|++++|++ |+++..|
T Consensus 433 ~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~g 510 (520)
T TIGR03269 433 RHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GKIVKIG 510 (520)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999765 899999999986 47788999999985 7999888
Q ss_pred CC
Q 000562 1053 PL 1054 (1419)
Q Consensus 1053 ~~ 1054 (1419)
+.
T Consensus 511 ~~ 512 (520)
T TIGR03269 511 DP 512 (520)
T ss_pred CH
Confidence 74
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-60 Score=593.32 Aligned_cols=450 Identities=18% Similarity=0.261 Sum_probs=337.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1419)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999998775 9999999998754321 3569999999988899
Q ss_pred CCHHHHHHHhhh-hcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 224 MTVRETLDFAGQ-CQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 224 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
+||+||+.++.. ..+.. .+ . .+....++.+++.+||++..++.++
T Consensus 88 ~tv~~~l~~~~~~~~~~~--~~---~---------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 133 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMF--VD---Q---------------------------DKMYRDTKAIFDELDIDIDPRAKVA-- 133 (491)
T ss_pred CCHHHHhhcccccccccc--cC---H---------------------------HHHHHHHHHHHHHcCCCCCccCchh--
Confidence 999999987532 10000 00 0 0011246778999999877776654
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +++|+.++|+.+++.++||+|++|+
T Consensus 134 ---~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 134 ---TLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKER--GCGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred ---hCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 59999999999999999999999999999999999999999999998653 4567778999999999999999999
Q ss_pred CCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhc
Q 000562 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELA 462 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 462 (1419)
+|+++..|+.+++.. .+..+.+
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~~-------------- 230 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAMM-------------- 230 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHHH--------------
Confidence 999998876432100 0000000
Q ss_pred CccccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccccchhhH
Q 000562 463 VPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLG 542 (1419)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g 542 (1419)
....
T Consensus 231 --------------------------------------------------------------~~~~-------------- 234 (491)
T PRK10982 231 --------------------------------------------------------------VGRS-------------- 234 (491)
T ss_pred --------------------------------------------------------------hCCC--------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchHHHHHH
Q 000562 543 ALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQ 622 (1419)
Q Consensus 543 ~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~~ 622 (1419)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCC
Q 000562 623 LLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGH 702 (1419)
Q Consensus 623 ~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~nef~~~ 702 (1419)
..
T Consensus 235 ---------------------------------------------------~~--------------------------- 236 (491)
T PRK10982 235 ---------------------------------------------------LT--------------------------- 236 (491)
T ss_pred ---------------------------------------------------cc---------------------------
Confidence 00
Q ss_pred cccccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHHhhhcCc
Q 000562 703 SWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGE 782 (1419)
Q Consensus 703 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (1419)
.... .
T Consensus 237 -------------------------------------------------------~~~~-------~------------- 241 (491)
T PRK10982 237 -------------------------------------------------------QRFP-------D------------- 241 (491)
T ss_pred -------------------------------------------------------cccc-------c-------------
Confidence 0000 0
Q ss_pred hhhHHHHHhhhccccccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEc
Q 000562 783 NVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVG 862 (1419)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G 862 (1419)
. .. .+ .+..+.++|+++. .+.+|+|||+.+++||++||+|
T Consensus 242 ----~-------~~------~~--------~~~~i~~~~l~~~---------------~~~~l~~vsl~i~~Ge~~~l~G 281 (491)
T PRK10982 242 ----K-------EN------KP--------GEVILEVRNLTSL---------------RQPSIRDVSFDLHKGEILGIAG 281 (491)
T ss_pred ----c-------cC------CC--------CCcEEEEeCcccc---------------cCcccceeeEEEeCCcEEEEec
Confidence 0 00 00 0012344444332 1248999999999999999999
Q ss_pred CCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc----cccceEEEEccCC---CCCCCccHHHHHHHHhh--hcCCC
Q 000562 863 VSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQND---IHSPGLTVLESLLFSAW--LRLPS 933 (1419)
Q Consensus 863 ~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~--lr~~~ 933 (1419)
|||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+. .+++.+|+.++..+... .....
T Consensus 282 ~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (491)
T PRK10982 282 LVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKV 359 (491)
T ss_pred CCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccc
Confidence 999999999999999876 4689999999775421 1245589999985 35778888777433210 00000
Q ss_pred C-CcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHH
Q 000562 934 E-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTV 1011 (1419)
Q Consensus 934 ~-~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l 1011 (1419)
. ......++.++++++.+++. +..+.. +..|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|
T Consensus 360 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l 434 (491)
T PRK10982 360 GLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLI 434 (491)
T ss_pred cccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHH
Confidence 1 11223345678889999885 344544 3579999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 1012 RNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 1012 ~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
+++.++|.|||+++|+++ ++.+.+|++++|.+ |+++..++..
T Consensus 435 ~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 435 AELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred HHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 999888999999999986 57788999999985 7888777654
No 33
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=7.4e-59 Score=515.22 Aligned_cols=471 Identities=22% Similarity=0.315 Sum_probs=360.8
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCC--CCCeeeEEEECCccCCCCCCC-------ceEEEEcc
Q 000562 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEFVPP-------RTSAYVSQ 216 (1419)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~I~~~G~~~~~~~~~-------~~~~yv~Q 216 (1419)
....+++||||.+++||.++|+|.||||||-..+.+.|+++. ....+|+|.|+|.++-....+ ..|++++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 345799999999999999999999999999999999999876 234589999999987544321 47999999
Q ss_pred CC--CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccc
Q 000562 217 QD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 294 (1419)
Q Consensus 217 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 294 (1419)
+| .+-|-.|+..-|.-..++... +.+..++.++-++|+..|+++-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------------------------------~~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------------------------------LSRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------------------------------ccHHHHHHHHHHHHHHcCCCch
Confidence 98 355666777666544443211 1222334567888999999875
Q ss_pred ccccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhh
Q 000562 295 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 374 (1419)
Q Consensus 295 ~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 374 (1419)
...+ +.+...|||||||||.||.||+.+|++|+-|||||+||...+.+|.+.|+++..++ +..++.|+|+..-+-.+
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~-gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAEL-GMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHh-CcEEEEEeccHHHHHHh
Confidence 5433 46778999999999999999999999999999999999999999999999998876 56677899999999999
Q ss_pred cCeEEEEcCCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhh
Q 000562 375 FDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTG 454 (1419)
Q Consensus 375 ~D~vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (1419)
+|+|+||.+|+++++|+.+++.. .|.+ ||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH-----------------
Confidence 99999999999999998766521 1111 000
Q ss_pred hchHHhhcCccccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 000562 455 KNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTI 534 (1419)
Q Consensus 455 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~ 534 (1419)
+.+.+. .|. ..+
T Consensus 255 r~Ll~a--eP~----g~~-------------------------------------------------------------- 266 (534)
T COG4172 255 RKLLAA--EPS----GDP-------------------------------------------------------------- 266 (534)
T ss_pred HHHHhc--CCC----CCC--------------------------------------------------------------
Confidence 000000 000 000
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccccc
Q 000562 535 DDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDP 614 (1419)
Q Consensus 535 ~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~ 614 (1419)
T Consensus 267 -------------------------------------------------------------------------------- 266 (534)
T COG4172 267 -------------------------------------------------------------------------------- 266 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHH
Q 000562 615 NVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAA 694 (1419)
Q Consensus 615 ~~~rf~~~~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al 694 (1419)
T Consensus 267 -------------------------------------------------------------------------------- 266 (534)
T COG4172 267 -------------------------------------------------------------------------------- 266 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhcCCcccccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhh
Q 000562 695 SVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQE 774 (1419)
Q Consensus 695 ~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 774 (1419)
T Consensus 267 -------------------------------------------------------------------------------- 266 (534)
T COG4172 267 -------------------------------------------------------------------------------- 266 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhcCchhhHHHHHhhhccccccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeC
Q 000562 775 RDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRP 854 (1419)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~ 854 (1419)
.+ .+ +..+.-+..+|++...+.+..+- +...+...++++||+++++
T Consensus 267 ------------------------~p--~~------~~~~~ll~~~~v~v~f~i~~g~~--~r~~~~~~AVd~isl~L~~ 312 (534)
T COG4172 267 ------------------------PP--LP------EDAPVLLEVEDLRVWFPIKGGFL--RRTVDHLRAVDGISLTLRR 312 (534)
T ss_pred ------------------------CC--CC------CCCCceEEecceEEEEecCCccc--cccchheEEeccceeEecC
Confidence 00 00 00011222233322222221111 0012346789999999999
Q ss_pred CeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEEEccCCC--CCCCccHHHHHHHH
Q 000562 855 GVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDI--HSPGLTVLESLLFS 926 (1419)
Q Consensus 855 Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~--~~~~lTv~E~l~f~ 926 (1419)
||.+||+|.||||||||=.+|.+... .+|+|.++|.++.. ...++.+-.|+|||. +.|.+||.+-+.-+
T Consensus 313 gqTlGlVGESGSGKsTlG~allrL~~---s~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EG 389 (534)
T COG4172 313 GQTLGLVGESGSGKSTLGLALLRLIP---SQGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEG 389 (534)
T ss_pred CCeEEEEecCCCCcchHHHHHHhhcC---cCceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhh
Confidence 99999999999999999999999875 35999999998653 235677899999974 67999999999887
Q ss_pred hhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHH
Q 000562 927 AWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAI 1006 (1419)
Q Consensus 927 a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~ 1006 (1419)
.....| ..+..++++++.++++.+||..-.-. ..+.++|||||||++|||||+.+|++++||||||.||-.-+.+
T Consensus 390 L~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~----RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQ 464 (534)
T COG4172 390 LRVHEP-KLSAAERDQRVIEALEEVGLDPATRN----RYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQ 464 (534)
T ss_pred hhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhh----cCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHH
Confidence 766654 45678899999999999999864221 1256899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1007 VMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1007 i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+++||++.+ .|.+-++++||... +-.+||+++||++ |++|..||.
T Consensus 465 vv~LLr~LQ~k~~LsYLFISHDL~V-vrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 465 VLDLLRDLQQKHGLSYLFISHDLAV-VRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred HHHHHHHHHHHhCCeEEEEeccHHH-HHHhhceEEEEeC-CEEeeeCCH
Confidence 9999999974 48999999999763 6678999999985 899999996
No 34
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2e-59 Score=583.53 Aligned_cols=447 Identities=19% Similarity=0.266 Sum_probs=325.5
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCC--C--
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQ--V-- 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~--~-- 221 (1419)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.. +
T Consensus 17 ~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 93 (490)
T PRK10938 17 KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSP 93 (490)
T ss_pred eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhccc
Confidence 4999999999999999999999999999999999998775 8999999976643221 2458999998542 1
Q ss_pred ----CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccc
Q 000562 222 ----AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1419)
Q Consensus 222 ----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 297 (1419)
..+||+|++.+.. +...+++.+++.+||++..|.
T Consensus 94 ~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~~ 131 (490)
T PRK10938 94 GEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLDR 131 (490)
T ss_pred chhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhhC
Confidence 1467777764310 001235678899999887776
Q ss_pred cccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000562 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1419)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 377 (1419)
.++ .|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +++|+.++|+..++.+.||+
T Consensus 132 ~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tvii~tH~~~~~~~~~d~ 204 (490)
T PRK10938 132 RFK-----YLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQS--GITLVLVLNRFDEIPDFVQF 204 (490)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHhhCCE
Confidence 665 59999999999999999999999999999999999999999999998753 45667788999999999999
Q ss_pred EEEEcCCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhch
Q 000562 378 VILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNL 457 (1419)
Q Consensus 378 vilL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 457 (1419)
|++|++|+++.+|+++++.. .+.+... ..
T Consensus 205 v~~l~~G~i~~~~~~~~~~~---------------~~~~~~~-----------------------------~~------- 233 (490)
T PRK10938 205 AGVLADCTLAETGEREEILQ---------------QALVAQL-----------------------------AH------- 233 (490)
T ss_pred EEEEECCEEEEeCCHHHHhc---------------chhhhhh-----------------------------hh-------
Confidence 99999999999887654310 0000000 00
Q ss_pred HHhhcCccccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCcccccc
Q 000562 458 SEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDG 537 (1419)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~ 537 (1419)
......
T Consensus 234 -------------------------------------------------------------------------~~~~~~- 239 (490)
T PRK10938 234 -------------------------------------------------------------------------SEQLEG- 239 (490)
T ss_pred -------------------------------------------------------------------------hhccCc-
Confidence 000000
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchH
Q 000562 538 GLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVV 617 (1419)
Q Consensus 538 ~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~ 617 (1419)
.
T Consensus 240 ------------------------------------------------------~------------------------- 240 (490)
T PRK10938 240 ------------------------------------------------------V------------------------- 240 (490)
T ss_pred ------------------------------------------------------c-------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHh
Q 000562 618 RFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVN 697 (1419)
Q Consensus 618 rf~~~~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~n 697 (1419)
..|
T Consensus 241 -------------------------------------------------------~~~---------------------- 243 (490)
T PRK10938 241 -------------------------------------------------------QLP---------------------- 243 (490)
T ss_pred -------------------------------------------------------ccC----------------------
Confidence 000
Q ss_pred hhcCCcccccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHHh
Q 000562 698 EFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDR 777 (1419)
Q Consensus 698 ef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 777 (1419)
.. ..
T Consensus 244 ------------~~--------------------------------------------------------~~-------- 247 (490)
T PRK10938 244 ------------EP--------------------------------------------------------DE-------- 247 (490)
T ss_pred ------------cc--------------------------------------------------------cc--------
Confidence 00 00
Q ss_pred hhcCchhhHHHHHhhhccccccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeE
Q 000562 778 RRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVL 857 (1419)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~ 857 (1419)
. .. .. . .+. ....+.++|+++.. +++.+|+|+|+++++||+
T Consensus 248 -----~---~~------~~--~---~~~-------~~~~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~ 288 (490)
T PRK10938 248 -----P---SA------RH--A---LPA-------NEPRIVLNNGVVSY-------------NDRPILHNLSWQVNPGEH 288 (490)
T ss_pred -----c---cc------cc--c---cCC-------CCceEEEeceEEEE-------------CCeeEEeeceEEEcCCCE
Confidence 0 00 00 0 000 00124445554433 234699999999999999
Q ss_pred EEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc----ccccceEEEEccCCCCCC--CccHHHHHHHHhhh--
Q 000562 858 TALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSP--GLTVLESLLFSAWL-- 929 (1419)
Q Consensus 858 ~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d~~~~--~lTv~E~l~f~a~l-- 929 (1419)
++|+||||||||||+++|+|..+. ..+|+|.++|.+... ...++.+||++|++.+.+ ..|+++++.+....
T Consensus 289 ~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~ 367 (490)
T PRK10938 289 WQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSI 367 (490)
T ss_pred EEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhcccccc
Confidence 999999999999999999996531 147999999976421 123467999999875543 35777766543211
Q ss_pred cCCCCCcHHHHHHHHHHHHHHcCCcc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHH
Q 000562 930 RLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVM 1008 (1419)
Q Consensus 930 r~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~ 1008 (1419)
....... .+.++.++++++.+++.+ ..+..+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..++
T Consensus 368 ~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~ 441 (490)
T PRK10938 368 GIYQAVS-DRQQKLAQQWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVR 441 (490)
T ss_pred ccccCCC-HHHHHHHHHHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHH
Confidence 1111111 223456889999999986 666553 479999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcC-CEEEEEecCCCHHHHH-hcCeEEEEecCCEEEEeC
Q 000562 1009 RTVRNIVNTG-RTIVCTIHQPSIDIFE-SFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 1009 ~~l~~l~~~g-~tvi~~~H~~~~~~~~-~~D~v~~l~~gG~~~~~G 1052 (1419)
+.|++++++| .|||+++|+++ ++.+ .+|++++|++ |+++..-
T Consensus 442 ~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~~ 485 (490)
T PRK10938 442 RFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRYV 485 (490)
T ss_pred HHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEee
Confidence 9999998776 47999999976 3555 4899999986 6766543
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.5e-57 Score=570.74 Aligned_cols=189 Identities=20% Similarity=0.249 Sum_probs=154.9
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCC-CCCCCccH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGLTV 919 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d-~~~~~lTv 919 (1419)
++.+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.+++. ..+||++|++ .+++.+||
T Consensus 336 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~--------~~i~~v~q~~~~~~~~~tv 405 (556)
T PRK11819 336 DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGET--------VKLAYVDQSRDALDPNKTV 405 (556)
T ss_pred CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--------eEEEEEeCchhhcCCCCCH
Confidence 3569999999999999999999999999999999999866 46899998542 1489999986 67788999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsg 998 (1419)
+|++.+....+.. ... ....+++++.+++.+ ..+..+ ..|||||||||+||++|+.+|++|+|||||+|
T Consensus 406 ~e~l~~~~~~~~~---~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~~ 475 (556)
T PRK11819 406 WEEISGGLDIIKV---GNR--EIPSRAYVGRFNFKGGDQQKKV-----GVLSGGERNRLHLAKTLKQGGNVLLLDEPTND 475 (556)
T ss_pred HHHHHhhcccccc---ccc--HHHHHHHHHhCCCChhHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 9999886432211 111 122456899999864 345543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEE-EeCC
Q 000562 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGP 1053 (1419)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~-~~G~ 1053 (1419)
||+.++..+.+.|+++. .|||+++|+++ .+...+|++++|++||++. +.|+
T Consensus 476 LD~~~~~~l~~~l~~~~---~tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g~ 527 (556)
T PRK11819 476 LDVETLRALEEALLEFP---GCAVVISHDRW-FLDRIATHILAFEGDSQVEWFEGN 527 (556)
T ss_pred CCHHHHHHHHHHHHhCC---CeEEEEECCHH-HHHHhCCEEEEEECCCeEEEecCC
Confidence 99999999999999872 48999999976 4777899999998767776 5554
No 36
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.4e-56 Score=563.93 Aligned_cols=189 Identities=19% Similarity=0.259 Sum_probs=154.6
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCC-CCCCCccH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGLTV 919 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d-~~~~~lTv 919 (1419)
++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.+++. ..+||++|++ .+++.+||
T Consensus 334 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~--------~~i~~v~q~~~~~~~~~tv 403 (552)
T TIGR03719 334 DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET--------VKLAYVDQSRDALDPNKTV 403 (552)
T ss_pred CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--------eEEEEEeCCccccCCCCcH
Confidence 3569999999999999999999999999999999999865 45899998542 1489999986 47788999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsg 998 (1419)
+|++.+...... .... ...++++++.+++.+ ..+..+ ..|||||||||+||++|+.+|++|+|||||+|
T Consensus 404 ~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe~qrv~la~al~~~p~lllLDEPt~~ 473 (552)
T TIGR03719 404 WEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKV-----GQLSGGERNRVHLAKTLKSGGNVLLLDEPTND 473 (552)
T ss_pred HHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Confidence 999988643221 1111 123457899999864 445543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEE-EeCC
Q 000562 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGP 1053 (1419)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~-~~G~ 1053 (1419)
||+.+...+++.|+++. .|||+++|++. .+...+|++++|++||+++ +.|+
T Consensus 474 LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g~ 525 (552)
T TIGR03719 474 LDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEGN 525 (552)
T ss_pred CCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCCC
Confidence 99999999999999872 48999999976 4667899999998767766 5554
No 37
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-56 Score=562.72 Aligned_cols=186 Identities=18% Similarity=0.263 Sum_probs=154.8
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCC--CCCCcc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI--HSPGLT 918 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~--~~~~lT 918 (1419)
++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|. +.+||++|++. +.+.+|
T Consensus 331 ~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~--------~~i~~~~q~~~~~~~~~~t 400 (530)
T PRK15064 331 NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN--------ANIGYYAQDHAYDFENDLT 400 (530)
T ss_pred CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--------eEEEEEcccccccCCCCCc
Confidence 3469999999999999999999999999999999999865 45899999873 45899999864 456799
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
++|++.+.. ... ..++.++++++.+++. +..+..+ ..||||||||++||++|+.+|+||+|||||+
T Consensus 401 ~~~~~~~~~---~~~-----~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEPt~ 467 (530)
T PRK15064 401 LFDWMSQWR---QEG-----DDEQAVRGTLGRLLFSQDDIKKSV-----KVLSGGEKGRMLFGKLMMQKPNVLVMDEPTN 467 (530)
T ss_pred HHHHHHHhc---cCC-----ccHHHHHHHHHHcCCChhHhcCcc-----cccCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 999986421 111 1124578899999984 5555543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEE-EeCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGPL 1054 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~-~~G~~ 1054 (1419)
|||+.+...+++.|+++ +.|||++|||++ .+...+|++++|++ |+++ +.|+.
T Consensus 468 ~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~g~~ 520 (530)
T PRK15064 468 HMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFSGTY 520 (530)
T ss_pred CCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcCCCH
Confidence 99999999999999986 459999999986 46678999999986 5766 77764
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=4.9e-55 Score=546.71 Aligned_cols=199 Identities=23% Similarity=0.248 Sum_probs=164.4
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHHHH
Q 000562 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESL 923 (1419)
Q Consensus 844 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l 923 (1419)
.|+++|+++++||++||+||||||||||+++|+|..+ +.+|+|.++ ..++|++|+..+.+.+||+|++
T Consensus 354 ~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~----------~~i~y~~Q~~~~~~~~tv~e~l 421 (590)
T PRK13409 354 SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE----------LKISYKPQYIKPDYDGTVEDLL 421 (590)
T ss_pred EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----------eeEEEecccccCCCCCcHHHHH
Confidence 4889999999999999999999999999999999876 458999886 1489999998888899999999
Q ss_pred HHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHH
Q 000562 924 LFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARA 1003 (1419)
Q Consensus 924 ~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~ 1003 (1419)
.+..... .. ...++++++.+++.+..+..+ ..|||||||||+||++|+.+|+||+|||||+|||+.+
T Consensus 422 ~~~~~~~-----~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~ 488 (590)
T PRK13409 422 RSITDDL-----GS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQ 488 (590)
T ss_pred HHHhhhc-----Ch---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHH
Confidence 8752111 11 124678999999987777654 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCCc---hhHHHHHHHhcCCC
Q 000562 1004 AAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK---SCELIKYFEAVEGV 1071 (1419)
Q Consensus 1004 ~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~---~~~~~~~f~~~~g~ 1071 (1419)
+..+.+.|++++++ |+|||+++||+. .+...+|++++|+ | ++...|..... .+.+-.|++.+ ++
T Consensus 489 ~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~~~~~~~~~~~~~~l~~~-~i 556 (590)
T PRK13409 489 RLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHASGPMDMREGMNRFLKEL-GI 556 (590)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeecCCchhHHHHHHHHHHHc-CC
Confidence 99999999999764 899999999976 4667899999996 3 77777764332 12345667776 54
No 39
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-54 Score=544.41 Aligned_cols=185 Identities=22% Similarity=0.351 Sum_probs=151.9
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCC--CCCCCcc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND--IHSPGLT 918 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d--~~~~~lT 918 (1419)
++.+|+|+|++|++|+++||+|||||||||||++|+|... +.+|+|.+++. ..+||++|+. .+.+..|
T Consensus 324 ~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~--------~~igy~~Q~~~~~l~~~~~ 393 (638)
T PRK10636 324 DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG--------IKLGYFAQHQLEFLRADES 393 (638)
T ss_pred CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--------EEEEEecCcchhhCCccch
Confidence 4579999999999999999999999999999999999875 45899999742 2589999974 3456678
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
+.+++.- .. + ....+.+.++++.+++.. ..+..+ ..|||||||||+||++|+.+|++|+|||||+
T Consensus 394 ~~~~~~~---~~-~-----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgGekqRl~La~~l~~~p~lLlLDEPt~ 459 (638)
T PRK10636 394 PLQHLAR---LA-P-----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGGEKARLVLALIVWQRPNLLLLDEPTN 459 (638)
T ss_pred HHHHHHH---hC-c-----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 8877531 11 1 112345788999999863 455544 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEE-EeCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGPL 1054 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~-~~G~~ 1054 (1419)
|||+.+...+.+.|+++ +.|||+++||+. .+...+|++++|.+ |+++ |.|+.
T Consensus 460 ~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~g~~ 512 (638)
T PRK10636 460 HLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFDGDL 512 (638)
T ss_pred CCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcCCCH
Confidence 99999999999999987 349999999976 46778999999985 6776 88875
No 40
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.4e-54 Score=507.61 Aligned_cols=452 Identities=23% Similarity=0.348 Sum_probs=348.8
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCC----ceEEEEccCCCCCC
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP----RTSAYVSQQDWQVA 222 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 222 (1419)
..++|+|||+.+++||+++|+|.||||||||+|+|+|.+.|+ +|+|.+||++.....++ .-|+.|.|+..++|
T Consensus 20 gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~p 96 (500)
T COG1129 20 GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLVP 96 (500)
T ss_pred CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhccC
Confidence 457999999999999999999999999999999999999886 99999999988655443 56899999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
++||.|||.++.......... +.......+..+|+.+|++...++.||+
T Consensus 97 ~LsVaeNifLgre~~~~~g~i------------------------------d~~~m~~~A~~~l~~lg~~~~~~~~v~~- 145 (500)
T COG1129 97 NLSVAENIFLGREPTRRFGLI------------------------------DRKAMRRRARELLARLGLDIDPDTLVGD- 145 (500)
T ss_pred CccHHHHhhcccccccCCCcc------------------------------CHHHHHHHHHHHHHHcCCCCChhhhhhh-
Confidence 999999998765432210000 0111234577889999997558888875
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
||+||||-|.||||+..++++++|||||++|+...+.++++.++++.. .+..++.++|..+|++++||+|.||.
T Consensus 146 ----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~Ei~~i~DritVlR 219 (500)
T COG1129 146 ----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDEVFEIADRITVLR 219 (500)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHHHHHhcCEEEEEe
Confidence 999999999999999999999999999999999999999999999975 47888889999999999999999999
Q ss_pred CCeEEEEcCh-hhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhh
Q 000562 383 EGQIVYQGPR-VSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEEL 461 (1419)
Q Consensus 383 ~G~iv~~G~~-~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 461 (1419)
||+.+..++. .+. +.++..
T Consensus 220 DG~~v~~~~~~~~~--------------------------------------------~~~~lv---------------- 239 (500)
T COG1129 220 DGRVVGTRPTAAET--------------------------------------------SEDELV---------------- 239 (500)
T ss_pred CCEEeeecccccCC--------------------------------------------CHHHHH----------------
Confidence 9999976642 211 000000
Q ss_pred cCccccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccccchhh
Q 000562 462 AVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYL 541 (1419)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~ 541 (1419)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T COG1129 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchHHHHH
Q 000562 542 GALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSR 621 (1419)
Q Consensus 542 g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~ 621 (1419)
-.|+|-.
T Consensus 240 -----------------------------------------------------------------~~MvGr~-------- 246 (500)
T COG1129 240 -----------------------------------------------------------------RLMVGRE-------- 246 (500)
T ss_pred -----------------------------------------------------------------HHhhCcc--------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcC
Q 000562 622 QLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLG 701 (1419)
Q Consensus 622 ~~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~nef~~ 701 (1419)
T Consensus 247 -------------------------------------------------------------------------------- 246 (500)
T COG1129 247 -------------------------------------------------------------------------------- 246 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHHhhhcC
Q 000562 702 HSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKG 781 (1419)
Q Consensus 702 ~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 781 (1419)
.+ .
T Consensus 247 --~~------------------~--------------------------------------------------------- 249 (500)
T COG1129 247 --LE------------------D--------------------------------------------------------- 249 (500)
T ss_pred --hh------------------h---------------------------------------------------------
Confidence 00 0
Q ss_pred chhhHHHHHhhhccccccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEE
Q 000562 782 ENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALV 861 (1419)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 861 (1419)
..+ . . . .+ ...+..++.++++. ...++||||++++||+++|-
T Consensus 250 -----~~~-----~--~-~--~~------~~~~~~l~v~~l~~-----------------~~~~~dvSf~vr~GEIlGia 291 (500)
T COG1129 250 -----LFP-----E--P-P--EE------GIGEPVLEVRNLSG-----------------GGKVRDVSFTVRAGEILGIA 291 (500)
T ss_pred -----hcc-----c--c-c--cc------CCCCcEEEEecCCC-----------------CCceeCceeEEeCCcEEEEe
Confidence 000 0 0 0 00 00011122222211 11467999999999999999
Q ss_pred cCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc----cccceEEEEccC---CCCCCCccHHHHHHHHhhhcCC-C
Q 000562 862 GVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQN---DIHSPGLTVLESLLFSAWLRLP-S 933 (1419)
Q Consensus 862 G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~---d~~~~~lTv~E~l~f~a~lr~~-~ 933 (1419)
|-=|||+|-|+++|.|..+ ..+|+|.+||.+.... ..+.-++|||.| +-+++.++++||+.++...+.. .
T Consensus 292 GLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~ 369 (500)
T COG1129 292 GLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRR 369 (500)
T ss_pred ccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccc
Confidence 9999999999999999654 4589999999986532 345578999987 5678899999999887332322 1
Q ss_pred -CCcHHHHHHHHHHHHHHcCCcccc-CCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHH
Q 000562 934 -EIELETQRAFVEEVMELVELTSLS-GALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTV 1011 (1419)
Q Consensus 934 -~~~~~~~~~~v~~vl~~l~l~~~~-~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l 1011 (1419)
-.+....++.+++..+.+++..-. +.. +..||||.+|||.|||.|..+|+||+|||||.|+|.-+..+|.++|
T Consensus 370 ~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li 444 (500)
T COG1129 370 GLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLI 444 (500)
T ss_pred cccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHH
Confidence 244455566788889988885322 222 4579999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 1012 RNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 1012 ~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
++++++|++||+++-+.. |+...||||+||.+ |+++-.=+.+
T Consensus 445 ~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e~~~~ 486 (500)
T COG1129 445 RELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGELDRE 486 (500)
T ss_pred HHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEEeccc
Confidence 999999999999999975 79999999999985 7887644443
No 41
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=4.2e-54 Score=548.42 Aligned_cols=190 Identities=22% Similarity=0.285 Sum_probs=153.9
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCC-CCCCCccH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGLTV 919 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d-~~~~~lTv 919 (1419)
++.+|+|+|++|++|+++||+|||||||||||++|+|..+ +.+|+|.+ |.+. .+||++|+. .+.+.+||
T Consensus 331 ~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~-------~i~y~~q~~~~l~~~~tv 400 (635)
T PRK11147 331 GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL-------EVAYFDQHRAELDPEKTV 400 (635)
T ss_pred CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc-------EEEEEeCcccccCCCCCH
Confidence 4579999999999999999999999999999999999865 45899998 4321 489999975 57889999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsg 998 (1419)
.|++.+..... ... .....+.++++.+++. +..+..+ +.|||||||||+||++|+.+|++|||||||+|
T Consensus 401 ~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqRl~la~al~~~p~lLlLDEPt~~ 470 (635)
T PRK11147 401 MDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGERNRLLLARLFLKPSNLLILDEPTND 470 (635)
T ss_pred HHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 99998753211 011 1123467888888885 3455543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEe-cCCEEEEeCCC
Q 000562 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-RGGELIYAGPL 1054 (1419)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-~gG~~~~~G~~ 1054 (1419)
||+.+...+.+.|+++ +.|||++|||.. .+...+|++++|. +|.-..|.|..
T Consensus 471 LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g~y 523 (635)
T PRK11147 471 LDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVGGY 523 (635)
T ss_pred CCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccCCH
Confidence 9999999999999876 469999999975 4667899999997 55445566664
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=5.2e-52 Score=527.73 Aligned_cols=186 Identities=22% Similarity=0.316 Sum_probs=147.7
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHH
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 921 (1419)
..+|+|+|++|++|++++|+|||||||||||++|+|..+ +.+|+|.+++. ..+||++|+.. ..+++.+
T Consensus 522 ~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~--------~~igyv~Q~~~--~~l~~~~ 589 (718)
T PLN03073 522 PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK--------VRMAVFSQHHV--DGLDLSS 589 (718)
T ss_pred CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--------eeEEEEecccc--ccCCcch
Confidence 468999999999999999999999999999999999866 45899998752 35899999752 4456666
Q ss_pred HHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 000562 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1419)
Q Consensus 922 ~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD 1000 (1419)
+..+......+. .. .+.++++++.+++.+ ..+.. +..|||||||||+||++|+.+|++|+|||||+|||
T Consensus 590 ~~~~~~~~~~~~-~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqkqRvaLAraL~~~p~lLLLDEPT~~LD 659 (718)
T PLN03073 590 NPLLYMMRCFPG-VP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQKSRVAFAKITFKKPHILLLDEPSNHLD 659 (718)
T ss_pred hHHHHHHHhcCC-CC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 543221111111 11 234678999999973 44443 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEE-EeCCC
Q 000562 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGPL 1054 (1419)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~-~~G~~ 1054 (1419)
+.+...+++.|++. +.|||+++||+. .+...+|++++|.+ |+++ +.|+.
T Consensus 660 ~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~~ 709 (718)
T PLN03073 660 LDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGTF 709 (718)
T ss_pred HHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCCH
Confidence 99999998888764 349999999976 46678999999985 6877 77764
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=5.8e-51 Score=495.68 Aligned_cols=218 Identities=26% Similarity=0.308 Sum_probs=171.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1419)
+++++|+|+.+.+|+.++|+|+|||||||||++|+|.+.|+ +|+|...+ .-+++|++|++...+..||.
T Consensus 16 ~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~tv~ 84 (530)
T COG0488 16 RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKTVL 84 (530)
T ss_pred ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCccHH
Confidence 47999999999999999999999999999999999999876 99998754 23689999999988889999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCc---cHHHHHHHh-hhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDE---DLDIFMKSF-ALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---did~~~~~~-~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
+.+.-+.. ..++...+..... ...+++ ..+.+.... .+++++.+.+++.++..||++.. ++.++
T Consensus 85 ~~v~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~--- 152 (530)
T COG0488 85 DYVIEGFG-----ELRELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS--- 152 (530)
T ss_pred HHHHhhhH-----HHHHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh---
Confidence 99976543 1122221111111 111111 111221111 34567778889999999999887 67666
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
.||||||.||+||++|+.+|++|+|||||++||..+..++-+.|++. .+ ++|+++|++..+-+.|++|+-++.
T Consensus 153 --~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t~I~~ld~ 225 (530)
T COG0488 153 --SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVATHILELDR 225 (530)
T ss_pred --hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhhheEEecC
Confidence 59999999999999999999999999999999999999999999853 34 667799999999999999999999
Q ss_pred CeEE-EEcChhhH
Q 000562 384 GQIV-YQGPRVSV 395 (1419)
Q Consensus 384 G~iv-~~G~~~~~ 395 (1419)
|++. |.|..+..
T Consensus 226 g~l~~y~Gny~~~ 238 (530)
T COG0488 226 GKLTPYKGNYSSY 238 (530)
T ss_pred CceeEecCCHHHH
Confidence 9875 66655443
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=8.7e-50 Score=459.48 Aligned_cols=458 Identities=21% Similarity=0.328 Sum_probs=354.1
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCC----ceEEEEccCCCCCC
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP----RTSAYVSQQDWQVA 222 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 222 (1419)
...+++|||+.+++||+.+|+|.||||||||+++|.|.+.|+ +|+|.++|++..-..|. .-||+|.|+..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 467999999999999999999999999999999999999887 99999999988655543 46899999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
++||.|||..+..-.. +.+.+ ......+++++.+.+||+-..|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~-~~~~~------------------------------~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSK-GGLID------------------------------RRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCcccc-ccccC------------------------------HHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 9999999998754210 00000 011234578899999999988988886
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
||=||||||.|-++|+.+|++|+|||||+-|-+....++++.|++++.. +.+|+.|+|-..|+.+.+|++.+|.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~--G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAE--GKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeccHHHHHHhhCeeEEEe
Confidence 9999999999999999999999999999999999999999999999863 6667779999999999999999999
Q ss_pred CCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhcCcccccccccCCCCCCCCCCHhHHHHHHHhchhhhchHHhhc
Q 000562 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELA 462 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 462 (1419)
.|+++-.-++ . ++ .+.++.++.
T Consensus 215 ~Gkvvgt~~~--~--------------~~---------------------------~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDP--V--------------AE---------------------------TTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecC--C--------------CC---------------------------CCHHHHHHH---------------
Confidence 9998643210 0 00 000000000
Q ss_pred CccccccCCcccccCCCCCCchHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhcccCCCCccccccchhhH
Q 000562 463 VPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLG 542 (1419)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~~g 542 (1419)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhcccccchhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccccchHHHHHH
Q 000562 543 ALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQ 622 (1419)
Q Consensus 543 ~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~iP~~~i~~~i~~~i~Y~~~G~~~~~~rf~~~ 622 (1419)
|+|-.
T Consensus 237 ------------------------------------------------------------------MvG~~--------- 241 (501)
T COG3845 237 ------------------------------------------------------------------MVGRE--------- 241 (501)
T ss_pred ------------------------------------------------------------------hcCCc---------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhcHHHHHHHHHHHhhhcCC
Q 000562 623 LLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGH 702 (1419)
Q Consensus 623 ~l~~~~~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ya~~al~~nef~~~ 702 (1419)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T COG3845 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCccchHHHhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHHhhhcCc
Q 000562 703 SWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGE 782 (1419)
Q Consensus 703 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (1419)
+. .
T Consensus 242 ----------------v~-----------------------------------------------~-------------- 244 (501)
T COG3845 242 ----------------VV-----------------------------------------------L-------------- 244 (501)
T ss_pred ----------------cc-----------------------------------------------c--------------
Confidence 00 0
Q ss_pred hhhHHHHHhhhccccccccccccCCcccccccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEc
Q 000562 783 NVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVG 862 (1419)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G 862 (1419)
..+. ... ..+ +.-+..+|++...+ .....+++|||++++||++||.|
T Consensus 245 ----~~~~----~~~-------~pg------~~vL~V~~L~v~~~------------~~~~~v~~vs~~Vr~GEIvGIAG 291 (501)
T COG3845 245 ----RVVK----PPS-------TPG------EVVLEVEDLSVKDR------------RGVTAVKDVSFEVRAGEIVGIAG 291 (501)
T ss_pred ----cccc----CCC-------CCC------CeEEEEeeeEeecC------------CCCceeeeeeeEEecCcEEEEEe
Confidence 0000 000 000 12244444443321 12467889999999999999999
Q ss_pred CCCCChhHHHHhHhCCCCCceEEEEEEECCccC----Cc-ccccceEEEEccCC---CCCCCccHHHHHHHHhhhcCC--
Q 000562 863 VSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK----RQ-ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRLP-- 932 (1419)
Q Consensus 863 ~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~----~~-~~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~lr~~-- 932 (1419)
..|-|-+.|+.+|+|..+ +.+|+|.++|+++ .. ...+.-++|||.|- .+.+.+|+.||+.+...-+.|
T Consensus 292 V~GNGQ~eL~eaisGlr~--~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~ 369 (501)
T COG3845 292 VAGNGQSELVEAISGLRK--PASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFS 369 (501)
T ss_pred cCCCCHHHHHHHHhCCCc--cCCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccc
Confidence 999999999999999875 3459999999986 22 22345689999975 456899999999876432211
Q ss_pred --CCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHH
Q 000562 933 --SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRT 1010 (1419)
Q Consensus 933 --~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~ 1010 (1419)
.-......++...++++.++....... ...+.||||++||+-+||+|..+|++|+..+||.|||..+.+.|.+.
T Consensus 370 ~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~ 445 (501)
T COG3845 370 RGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHER 445 (501)
T ss_pred cccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHH
Confidence 123445667788999999988632211 12468999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 1011 VRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 1011 l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
|.+.+++|+.|++++-+.+ ++++.+|||.||.+ |+++...+..+
T Consensus 446 l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~~ 489 (501)
T COG3845 446 LLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPEE 489 (501)
T ss_pred HHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceeccccccc
Confidence 9999999999999999987 79999999999995 79988877653
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-44 Score=375.13 Aligned_cols=211 Identities=27% Similarity=0.376 Sum_probs=186.7
Q ss_pred ccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCC----cccccceEEEEc
Q 000562 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR----QETFARISGYCE 908 (1419)
Q Consensus 833 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~----~~~~~~~~gyv~ 908 (1419)
++..+.++..++|+|||+++++||+++|+|||||||||||+||.++.. +.+|+|.++|.+.. ....|+.+|+|+
T Consensus 6 ~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~~~~~~~~~R~~vGmVF 83 (240)
T COG1126 6 KNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVGDKKDILKLRRKVGMVF 83 (240)
T ss_pred EeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEeccchhhHHHHHHhcCeec
Confidence 444556678899999999999999999999999999999999999877 56899999997543 235678899999
Q ss_pred cCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000562 909 QNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1419)
Q Consensus 909 Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ 988 (1419)
|+..+||++||.||+..+...- ...++++.++...+.|+.+||.+.+|... ..|||||||||+|||||+.+|+
T Consensus 84 Q~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGGQqQRVAIARALaM~P~ 156 (240)
T COG1126 84 QQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGGQQQRVAIARALAMDPK 156 (240)
T ss_pred ccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcHHHHHHHHHHHHcCCCC
Confidence 9999999999999999875322 23456677788899999999999998863 5899999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
++++|||||.|||+...++.+.+++++++|.|.||+||++.. .-+.+|||+.|+ +|+++..|++
T Consensus 157 vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd-~G~iie~g~p 220 (240)
T COG1126 157 VMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMD-QGKIIEEGPP 220 (240)
T ss_pred EEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEee-CCEEEEecCH
Confidence 999999999999999999999999999999999999999874 667899999998 4899999875
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-43 Score=364.07 Aligned_cols=221 Identities=27% Similarity=0.378 Sum_probs=188.7
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC----CCCceEEEEccCCCCCC
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF----VPPRTSAYVSQQDWQVA 222 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~----~~~~~~~yv~Q~d~~~~ 222 (1419)
+..+|+|||+++++||+++|+|||||||||||++|.|+..++ +|+|.++|.++... ..++.+|+|+|+..+||
T Consensus 14 ~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 14 DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 357999999999999999999999999999999999998776 99999999765322 23578999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
++||.||+..+...- ......+++.....+|+.+||.+.+|...
T Consensus 91 HlTvleNv~lap~~v---------------------------------~~~~k~eA~~~A~~lL~~VGL~~ka~~yP--- 134 (240)
T COG1126 91 HLTVLENVTLAPVKV---------------------------------KKLSKAEAREKALELLEKVGLADKADAYP--- 134 (240)
T ss_pred cchHHHHHHhhhHHH---------------------------------cCCCHHHHHHHHHHHHHHcCchhhhhhCc---
Confidence 999999998864311 01112233456778999999999988654
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
..|||||||||+|||||+.+|+++++|||||+|||....++.+.++++++. +.|.+.++|....+.+.+|||+.|+
T Consensus 135 --~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e--GmTMivVTHEM~FAr~VadrviFmd 210 (240)
T COG1126 135 --AQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMIIVTHEMGFAREVADRVIFMD 210 (240)
T ss_pred --cccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc--CCeEEEEechhHHHHHhhheEEEee
Confidence 569999999999999999999999999999999999999999999999974 5666679999999999999999999
Q ss_pred CCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHH
Q 000562 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQE 418 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~ 418 (1419)
+|+++.+|+++++ |..|.+....+|+..
T Consensus 211 ~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 211 QGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred CCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 9999999999886 456776667777754
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=3.6e-42 Score=396.58 Aligned_cols=186 Identities=21% Similarity=0.285 Sum_probs=147.3
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccC--CCCCCCccHH
Q 000562 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQN--DIHSPGLTVL 920 (1419)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~--d~~~~~lTv~ 920 (1419)
.++++++|-+.+++.+|++||||||||||||++.|... +..|.|.-.-+. .+++..|. +.+.-+.++.
T Consensus 404 ~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H~--------~~~~y~Qh~~e~ldl~~s~l 473 (614)
T KOG0927|consen 404 MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSHN--------KLPRYNQHLAEQLDLDKSSL 473 (614)
T ss_pred hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--cccccccccccc--------cchhhhhhhHhhcCcchhHH
Confidence 68899999999999999999999999999999999766 457776544332 22333443 3333456777
Q ss_pred HHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 000562 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1419)
Q Consensus 921 E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD 1000 (1419)
|+++=. .+. +.+.+.+..++..+||....+.. ..+.||+|||+||.+|+.++..|.||+|||||+|||
T Consensus 474 e~~~~~----~~~----~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~Gqr~rVlFa~l~~kqP~lLlLDEPtnhLD 541 (614)
T KOG0927|consen 474 EFMMPK----FPD----EKELEEMRSILGRFGLTGDAQVV----PMSQLSDGQRRRVLFARLAVKQPHLLLLDEPTNHLD 541 (614)
T ss_pred HHHHHh----ccc----cchHHHHHHHHHHhCCCcccccc----chhhcccccchhHHHHHHHhcCCcEEEecCCCcCCC
Confidence 776421 111 23445678899999998655433 246899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
..+...+.+.|.+. ..+||+++||... +-..++++.+..+++...+.|..
T Consensus 542 i~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G~i 591 (614)
T KOG0927|consen 542 IETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDGDI 591 (614)
T ss_pred chhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCccH
Confidence 99999999999875 5789999999764 77789999999999899999974
No 48
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.8e-41 Score=390.49 Aligned_cols=216 Identities=32% Similarity=0.449 Sum_probs=189.5
Q ss_pred ccccc-ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCC
Q 000562 836 GVLED-RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDI 912 (1419)
Q Consensus 836 ~~~~~-~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~ 912 (1419)
.+.++ ++.+|+||||+|++||++||+|||||||||||++|+|... +.+|+|.++|.+... ...++.+||++|++.
T Consensus 11 ~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~ 88 (293)
T COG1131 11 TKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDVVKEPAKVRRRIGYVPQEPS 88 (293)
T ss_pred EEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeCccCHHHHHhheEEEccCCC
Confidence 34455 5789999999999999999999999999999999999877 468999999987654 456788999999999
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+++.+||+|+|.|.+.++.+.. ...+++++++++.++|.+.++.. +++||+||||||+||+||+++|+++||
T Consensus 89 ~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~kqrl~ia~aL~~~P~lliL 160 (293)
T COG1131 89 LYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMKQRLSIALALLHDPELLIL 160 (293)
T ss_pred CCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999999999987543 34556799999999999855544 358999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcC-CEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCCchhHHHHHHHh
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTG-RTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEA 1067 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g-~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~~f~~ 1067 (1419)
||||+|||+.++..+.+.|++++++| +||+++||+++ ++...||+|++|++ |++++.|+. .++...+..
T Consensus 161 DEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~~----~~l~~~~~~ 230 (293)
T COG1131 161 DEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGTP----EELKEKFGG 230 (293)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCCH----HHHHHhhcc
Confidence 99999999999999999999999887 89999999987 67788999999985 899999975 345555543
No 49
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.6e-41 Score=358.26 Aligned_cols=226 Identities=25% Similarity=0.361 Sum_probs=193.5
Q ss_pred ccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEE
Q 000562 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGY 906 (1419)
Q Consensus 833 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy 906 (1419)
++..+.++.+.+++|||++|++||+++||||||+||||||++|.|..+ +.+|+|.++|.++.+ ...++++|+
T Consensus 12 r~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i~~ls~~~~~~ir~r~Gv 89 (263)
T COG1127 12 RGVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDIPQLSEEELYEIRKRMGV 89 (263)
T ss_pred eeeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcchhccCHHHHHHHHhheeE
Confidence 334445678899999999999999999999999999999999999887 568999999988643 245678999
Q ss_pred EccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccc-cCCcccCCCCCCCCHHHHHHHHHHHHHhh
Q 000562 907 CEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVA 985 (1419)
Q Consensus 907 v~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~~g~~~~~~lSgGqrqrl~iA~~L~~ 985 (1419)
++|+-.+|..+||+||+.|.. |.....+++..++.+..-++.+||... .+.. +++||||+|||+++||||+.
T Consensus 90 lFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsELSGGM~KRvaLARAial 162 (263)
T COG1127 90 LFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSELSGGMRKRVALARAIAL 162 (263)
T ss_pred EeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chhhcchHHHHHHHHHHHhc
Confidence 999999999999999999854 333455667777888888999999876 5443 56899999999999999999
Q ss_pred CCCcceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC----chhH
Q 000562 986 NPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS----KSCE 1060 (1419)
Q Consensus 986 ~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~----~~~~ 1060 (1419)
+|+|||+||||+||||.++..+-++|+++.++ |.|++++|||.+ +++..+|++++|.+ |+++..|++++ +..-
T Consensus 163 dPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gkv~~~Gt~~el~~sd~P~ 240 (263)
T COG1127 163 DPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GKVIAEGTPEELLASDDPW 240 (263)
T ss_pred CCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CEEEEeCCHHHHHhCCCHH
Confidence 99999999999999999999999999999876 899999999987 68899999999996 79999999753 1123
Q ss_pred HHHHHHhcC
Q 000562 1061 LIKYFEAVE 1069 (1419)
Q Consensus 1061 ~~~~f~~~~ 1069 (1419)
+.+||....
T Consensus 241 v~qf~~G~~ 249 (263)
T COG1127 241 VRQFFNGIR 249 (263)
T ss_pred HHHHhcCCC
Confidence 677887653
No 50
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-41 Score=367.99 Aligned_cols=224 Identities=27% Similarity=0.386 Sum_probs=195.2
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC------CceEEEEccCCC
Q 000562 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDW 219 (1419)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~ 219 (1419)
...++|+|||+.|++|++.+|+|+||||||||++++.++-.|+ +|+|.++|.++..... ++.+|+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999998776 9999999988876543 478999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccc
Q 000562 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1419)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1419)
++...||.||++|+.+..+..+ .+.+.++.++|+.+||++.+|..
T Consensus 94 LLssrTV~~NvA~PLeiag~~k----------------------------------~ei~~RV~elLelVgL~dk~~~y- 138 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVPK----------------------------------AEIKQRVAELLELVGLSDKADRY- 138 (339)
T ss_pred ccccchHHhhhhhhHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhccC-
Confidence 9999999999999887765221 12345788999999999888755
Q ss_pred cCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000562 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1419)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 379 (1419)
+.+|||||||||+|||||+.+|+||++|||||+|||.|+..|.+.|+++.+++ +.||+.++|-.+-+-+.||||.
T Consensus 139 ----P~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 139 ----PAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred ----chhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhhe
Confidence 45799999999999999999999999999999999999999999999998876 5667779999999999999999
Q ss_pred EEcCCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhc
Q 000562 380 LLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVT 420 (1419)
Q Consensus 380 lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~ 420 (1419)
+|++|+++++|+..++ |..|.+.-..+|+.+..
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 9999999999999887 45666665666666544
No 51
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.1e-41 Score=372.21 Aligned_cols=212 Identities=27% Similarity=0.410 Sum_probs=183.2
Q ss_pred cccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCC
Q 000562 836 GVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI 912 (1419)
Q Consensus 836 ~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~ 912 (1419)
+..++++.+|+|+|+++++||+++|+||||||||||||+|+|..+ +.+|+|.++|.++.. +.++|.++|+||...
T Consensus 9 s~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~ 86 (258)
T COG1120 9 SFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDIASLSPKELAKKLAYVPQSPS 86 (258)
T ss_pred EEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCchhhcCHHHHhhhEEEeccCCC
Confidence 334567889999999999999999999999999999999999776 468999999998643 567889999999998
Q ss_pred CCCCccHHHHHHHHhhhcCCC-CCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 000562 913 HSPGLTVLESLLFSAWLRLPS-EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ill 991 (1419)
....+||+|.+.++..-.... ....++.++.++++++.+++.++++..+ ..||||||||+.|||||+++|+||+
T Consensus 87 ~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSGGerQrv~iArALaQ~~~iLL 161 (258)
T COG1120 87 APFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSGGERQRVLIARALAQETPILL 161 (258)
T ss_pred CCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccChhHHHHHHHHHHHhcCCCEEE
Confidence 888999999999874322111 1122344557899999999999999875 4799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHH-hcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIV-NTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
||||||.||...+.++++.+++++ ++|+|||+++||++. ....+|++++|++ |+++..|++.+
T Consensus 162 LDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a~G~p~e 225 (258)
T COG1120 162 LDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVAQGTPEE 225 (258)
T ss_pred eCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEeecCcch
Confidence 999999999999999999999998 459999999999984 7789999999985 89999998753
No 52
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-41 Score=354.36 Aligned_cols=210 Identities=26% Similarity=0.387 Sum_probs=185.4
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCC
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 223 (1419)
++.+++|+|++|++||+++++|||||||||+||+|.+++.|+ +|+|.+||+++.+.+. +|.+|||-|+-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 457999999999999999999999999999999999999886 9999999999987654 6899999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
+||.|||.+-..+.+-. .++.+.+++++|+.+||+.. ...+++
T Consensus 90 ~Tv~eNIa~VP~L~~w~----------------------------------k~~i~~r~~ELl~lvgL~p~---~~~~Ry 132 (309)
T COG1125 90 LTVAENIATVPKLLGWD----------------------------------KERIKKRADELLDLVGLDPS---EYADRY 132 (309)
T ss_pred ccHHHHHHhhhhhcCCC----------------------------------HHHHHHHHHHHHHHhCCCHH---HHhhcC
Confidence 99999998866554322 12234568999999999752 123466
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
+..|||||+|||.+||||+.+|++++||||+++||+-++.++.+.++++.+..+ +||+.++|+..|++.++|||++|++
T Consensus 133 P~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~-kTivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 133 PHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELG-KTIVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred chhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhC-CEEEEEecCHHHHHhhhceEEEecC
Confidence 778999999999999999999999999999999999999999999999988775 5566699999999999999999999
Q ss_pred CeEEEEcChhhHHH
Q 000562 384 GQIVYQGPRVSVLD 397 (1419)
Q Consensus 384 G~iv~~G~~~~~~~ 397 (1419)
|+++.++++++++.
T Consensus 212 G~i~Q~~~P~~il~ 225 (309)
T COG1125 212 GEIVQYDTPDEILA 225 (309)
T ss_pred CeEEEeCCHHHHHh
Confidence 99999999999874
No 53
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-41 Score=364.93 Aligned_cols=203 Identities=27% Similarity=0.461 Sum_probs=176.1
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCC--CCCCccHH
Q 000562 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI--HSPGLTVL 920 (1419)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~--~~~~lTv~ 920 (1419)
.+|+|||+++++|++++|+||||||||||+|+|.|..+ +.+|+|.++|.+.....-+..+|||||... ....+||+
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV~ 95 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITVK 95 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccccccccCCeEEEcCcccccCCCCCcCHH
Confidence 69999999999999999999999999999999999766 568999999998765444578999999642 22348999
Q ss_pred HHHHHHhhhcCC--CCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 000562 921 ESLLFSAWLRLP--SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1419)
Q Consensus 921 E~l~f~a~lr~~--~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsg 998 (1419)
|.+..+..-+.. .... ++.++.++++|+.+|+.+++|..+| .|||||+||+.|||||+++|++|+|||||+|
T Consensus 96 d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGGQ~QRV~lARAL~~~p~lllLDEP~~g 169 (254)
T COG1121 96 DVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQIG-----ELSGGQKQRVLLARALAQNPDLLLLDEPFTG 169 (254)
T ss_pred HHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCccc-----ccCcHHHHHHHHHHHhccCCCEEEecCCccc
Confidence 999887433321 1122 3346789999999999999999876 6999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
+|+.++..++++|++++++|+||++++||++ .+.+.||+++.|+ +++++.||+.+
T Consensus 170 vD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~G~~~~ 224 (254)
T COG1121 170 VDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIASGPPEE 224 (254)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEeccChhh
Confidence 9999999999999999988999999999998 5889999999997 58999999864
No 54
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-41 Score=365.75 Aligned_cols=203 Identities=26% Similarity=0.370 Sum_probs=182.9
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEEEccCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~~~ 914 (1419)
...+|+|||++|++||++||+|+||||||||++++.+... +.+|+|.+||.++.. +..|+.+|+++|+..++
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLL 95 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLL 95 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecccCChHHHHHHHhhccEEecccccc
Confidence 4679999999999999999999999999999999999877 569999999976532 35678899999999999
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDE 994 (1419)
...||.||+.|...+.. .++++.+++|.++++.+||.+.++.. +.+|||||||||+|||||+.+|+||++||
T Consensus 96 ssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLSGGQKQRVaIARALa~~P~iLL~DE 167 (339)
T COG1135 96 SSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLSGGQKQRVAIARALANNPKILLCDE 167 (339)
T ss_pred ccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcCcchhhHHHHHHHHhcCCCEEEecC
Confidence 99999999999877663 55778889999999999999888876 35899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|||.|||.+...|.+.|+++.++ |.||++++|+++. +-+.|||+.+|++ |+++..|+..
T Consensus 168 aTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~V-vk~ic~rVavm~~-G~lvE~G~v~ 227 (339)
T COG1135 168 ATSALDPETTQSILELLKDINRELGLTIVLITHEMEV-VKRICDRVAVLDQ-GRLVEEGTVS 227 (339)
T ss_pred ccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHhhhheEeeC-CEEEEeccHH
Confidence 99999999999999999999754 9999999999763 6678999999985 8999999864
No 55
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=357.81 Aligned_cols=194 Identities=26% Similarity=0.384 Sum_probs=173.7
Q ss_pred ccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCcc
Q 000562 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 839 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
++...+|+|||++|.+||+++|+||||||||||||+|+|..+ +.+|+|.++|.++. .....+|||+|++.++|-+|
T Consensus 13 f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~T 88 (248)
T COG1116 13 FGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLT 88 (248)
T ss_pred eCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCcccC--CCCCCEEEEeccCcccchhh
Confidence 345789999999999999999999999999999999999887 56899999999873 33556899999999999999
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsg 998 (1419)
|+||+.|+...+. ...+++++++++.++.+||.+..|.. +.+|||||||||+|||||+.+|+||+||||.+.
T Consensus 89 v~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgA 160 (248)
T COG1116 89 VLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQRVAIARALATRPKLLLLDEPFGA 160 (248)
T ss_pred HHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHHHHHHHHHHhcCCCEEEEcCCcch
Confidence 9999999877653 34456667899999999999999886 468999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHH-hcCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000562 999 LDARAAAIVMRTVRNIV-NTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1419)
Q Consensus 999 LD~~~~~~i~~~l~~l~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1045 (1419)
||+.|+..+++.+.++. +.++|||++|||.+ |...++|||++|.++
T Consensus 161 LDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 161 LDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred hhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999986 45899999999987 677889999999864
No 56
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-40 Score=352.64 Aligned_cols=210 Identities=25% Similarity=0.343 Sum_probs=186.7
Q ss_pred cccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccC
Q 000562 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQN 910 (1419)
Q Consensus 834 ~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~ 910 (1419)
+.++.++.+.+++|+|++|++||+++++|||||||||+|++|.+... +.+|+|.+||.++.. ...||.+|||-|+
T Consensus 6 nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~~~d~~~LRr~IGYviQq 83 (309)
T COG1125 6 NVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDISDLDPVELRRKIGYVIQQ 83 (309)
T ss_pred eeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecccCCHHHHHHhhhhhhhh
Confidence 33445567889999999999999999999999999999999999877 569999999998754 4678899999999
Q ss_pred CCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc--ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000562 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS--LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1419)
Q Consensus 911 d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~--~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ 988 (1419)
-.+||++||.||+.+-..+. ..++++.+++++|+++++||.+ +++.. +++|||||+|||.+||||+++|+
T Consensus 84 igLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSGGQQQRVGv~RALAadP~ 155 (309)
T COG1125 84 IGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSGGQQQRVGVARALAADPP 155 (309)
T ss_pred cccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCcchhhHHHHHHHHhcCCC
Confidence 99999999999998876554 4566777889999999999975 66655 56899999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
||+||||.+.|||-++..+++-++++.++ |+|||++|||.+ |.+.++||+++|+ +|+++..+++.
T Consensus 156 ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q~~~P~ 221 (309)
T COG1125 156 ILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQYDTPD 221 (309)
T ss_pred eEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEEeCCHH
Confidence 99999999999999999999999999755 999999999987 7889999999998 57998888753
No 57
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-40 Score=378.49 Aligned_cols=217 Identities=29% Similarity=0.430 Sum_probs=194.1
Q ss_pred eeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCC-ceEEEEccCCCCCCCCCHHH
Q 000562 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP-RTSAYVSQQDWQVAEMTVRE 228 (1419)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 228 (1419)
+|+|+|++|++||+++|+|||||||||||++|||+.+++ +|+|.++|.++++..|+ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999876 99999999999998774 89999999999999999999
Q ss_pred HHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCC
Q 000562 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1419)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 308 (1419)
||.|+.+.++... .+.+.+++++.+.|+|++..|... ++||
T Consensus 95 Niaf~Lk~~~~~k----------------------------------~ei~~rV~eva~~L~l~~lL~r~P-----~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVPK----------------------------------AEIDKRVKEVAKLLGLEHLLNRKP-----LQLS 135 (338)
T ss_pred HhhhhhhhCCCch----------------------------------HHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9999988764321 123456889999999999888654 5799
Q ss_pred hHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 000562 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1419)
Q Consensus 309 GGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~ 388 (1419)
|||||||++||||+.+|++++||||+|.||...+.++...++++.+.+ ++|+|.++|+..|+..++|+|.+|++|++..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l-~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERL-GTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhc-CCcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999999999987765 4666679999999999999999999999999
Q ss_pred EcChhhHHHHHHhCCCCCCCCCChHHHHH
Q 000562 389 QGPRVSVLDFFASMGFSCPKRKNVADFLQ 417 (1419)
Q Consensus 389 ~G~~~~~~~~F~~~G~~~p~~~~~adfl~ 417 (1419)
.|++.++ |..|.+.-+|.|+-
T Consensus 215 ~g~p~el--------y~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLEL--------YERPANLFVAGFIG 235 (338)
T ss_pred cCChHHH--------hhCccchhhhhhcC
Confidence 9999998 45677777777763
No 58
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.8e-41 Score=351.45 Aligned_cols=208 Identities=28% Similarity=0.395 Sum_probs=179.2
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEEEccCCCC
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIH 913 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~~ 913 (1419)
+++++|+|||+.|++||++||+|+|||||||||++|.|... +.+|+|.+||..+.. +.+++.+||++|++.+
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nL 92 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNL 92 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccchhccchHHHHHHHHhceeEeccCCc
Confidence 57899999999999999999999999999999999999765 568999999976432 3467889999999999
Q ss_pred CCCccHHHHHHHHhhhcCC-----CCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000562 914 SPGLTVLESLLFSAWLRLP-----SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~-----~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ 988 (1419)
.+.++|.+|++.+..-+.+ -....++.+..+-+.++.+|+.+.+-...+ .|||||+|||+|||+|+.+|+
T Consensus 93 v~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~-----~LSGGQQQRVaIARaL~Q~pk 167 (258)
T COG3638 93 VPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRAS-----TLSGGQQQRVAIARALVQQPK 167 (258)
T ss_pred ccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhc-----cCCcchhHHHHHHHHHhcCCC
Confidence 9999999999876432222 122234455667889999999988776643 799999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
|++.|||+++|||.++..||+.|+++++ .|.|||++.||.+. ..++|||++-|++ |+++|+||..+
T Consensus 168 iILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~~-G~ivfDg~~~e 234 (258)
T COG3638 168 IILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLKA-GRIVFDGPASE 234 (258)
T ss_pred EEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEecC-CcEEEeCChhh
Confidence 9999999999999999999999999975 48999999999874 6688999999985 89999999864
No 59
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-40 Score=358.71 Aligned_cols=223 Identities=30% Similarity=0.435 Sum_probs=188.8
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCc---cCCCCCC-CceEEEEccCCCCCC
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGH---GFKEFVP-PRTSAYVSQQDWQVA 222 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~---~~~~~~~-~~~~~yv~Q~d~~~~ 222 (1419)
...+++|||+.|+.||+++++|||||||||||++|||+..|+ +|.|.+||. +.+.... .|.+|||+|+..+|+
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 346899999999999999999999999999999999999887 999999999 5555333 489999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
+|||.+||.|+.+++.. +. +..+.+.+++++|+.+.|++.++ +
T Consensus 91 HmtVa~NIAFGl~~~~~--~p------------------------------~~~~~r~rv~elL~lvqL~~la~-----r 133 (345)
T COG1118 91 HMTVADNIAFGLKVRKE--RP------------------------------SEAEIRARVEELLRLVQLEGLAD-----R 133 (345)
T ss_pred cchHHhhhhhccccccc--CC------------------------------ChhhHHHHHHHHHHHhcccchhh-----c
Confidence 99999999999876511 00 01123456888999999988765 5
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
++..|||||||||++||||+..|++|+||||+++||.+.+.++-+.|+++....+.| .+.++|+..|+++++|+|++|+
T Consensus 134 yP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~t-tvfVTHD~eea~~ladrvvvl~ 212 (345)
T COG1118 134 YPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVT-TVFVTHDQEEALELADRVVVLN 212 (345)
T ss_pred CchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCce-EEEEeCCHHHHHhhcceEEEec
Confidence 567899999999999999999999999999999999999999999999987765544 5569999999999999999999
Q ss_pred CCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHH
Q 000562 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQE 418 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~ 418 (1419)
+|+|...||++++- ..|...-+..|+-+
T Consensus 213 ~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 213 QGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred CCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 99999999999983 34555445555443
No 60
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-40 Score=378.66 Aligned_cols=223 Identities=31% Similarity=0.434 Sum_probs=197.8
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCC
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 225 (1419)
+..+|+|+|+.|++||+++|+|||||||||||++|||+..|+ +|+|.++|++++...+ +|.+++|+|+-.+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 457999999999999999999999999999999999999887 9999999999998776 588999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+||+.|+.+.+.... +.+.+.+++++|+.++|++.++..+ .
T Consensus 94 V~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~R~p-----~ 135 (352)
T COG3842 94 VEENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFADRKP-----H 135 (352)
T ss_pred HHHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhhhCh-----h
Confidence 9999999987432111 0112446899999999999777554 5
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
.|||||||||++||||+.+|++|+||||.|+||..-+.++...|+++.+.. +.|.|.++|+..|++.++|+|++|++|+
T Consensus 136 qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 136 QLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred hhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCc
Confidence 699999999999999999999999999999999999999999999998877 5666679999999999999999999999
Q ss_pred EEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHh
Q 000562 386 IVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEV 419 (1419)
Q Consensus 386 iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v 419 (1419)
|...|+++++ |..|...-+|+|.-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 5678888888888653
No 61
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=340.08 Aligned_cols=201 Identities=27% Similarity=0.390 Sum_probs=183.5
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCccHH
Q 000562 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTVL 920 (1419)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv~ 920 (1419)
++++||||+++.||++||+|+|||||||+|++|++... +.+|.|++||.+... ...++.+|.++.+..++..||++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 48999999999999999999999999999999999877 568999999998543 45678899999888889999999
Q ss_pred HHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 000562 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1419)
Q Consensus 921 E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD 1000 (1419)
|||.|.+.+.. ....+.+++.+++.+.++|.++.|+.+| ++|.|+||||.|||||+++|++++|||||||||
T Consensus 94 Enl~~Fa~L~~---l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLNG---LSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHhh---hhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 99999998873 4456667889999999999999999876 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
..+.+.+.+.++++.+.|++||+++|.++ ++...||+++++++ |++++.|...
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 99999999999999988999999999986 68789999999996 7999999863
No 62
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-40 Score=359.51 Aligned_cols=209 Identities=29% Similarity=0.424 Sum_probs=187.4
Q ss_pred ccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCc---cCCc-ccccceEEEEccCCC
Q 000562 837 VLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY---PKRQ-ETFARISGYCEQNDI 912 (1419)
Q Consensus 837 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~d~ 912 (1419)
+..+...+++|||+.|+.||++||+|||||||||||++|||..+ +..|.|.+||. +..+ ....|.+|||+|+..
T Consensus 10 ~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YA 87 (345)
T COG1118 10 KRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYA 87 (345)
T ss_pred hhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechh
Confidence 34456789999999999999999999999999999999999987 56899999999 5443 345678999999999
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
++++|||.+|+.|+..++ ....+..+.+.+++|+++++.|+++.+.. +.+|||||||||++||||+..|++|+|
T Consensus 88 LF~HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLL 161 (345)
T COG1118 88 LFPHMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLL 161 (345)
T ss_pred hcccchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEee
Confidence 999999999999998877 33345567788899999999999999876 468999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|||.++||+.-+..+.+.|+++.+. |.|+|++|||+. ++.+.+|||++|++ |+++..||..
T Consensus 162 DEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 162 DEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred cCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 9999999999999999999999866 999999999986 79999999999996 7999999874
No 63
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.7e-40 Score=362.42 Aligned_cols=210 Identities=32% Similarity=0.456 Sum_probs=181.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
++||+|+|+.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.+... .|.+|||||.+...+.+
T Consensus 15 ~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~ 91 (258)
T COG1120 15 KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGL 91 (258)
T ss_pred eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCc
Confidence 47999999999999999999999999999999999999876 9999999999887654 37899999998888899
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||+|-+.++..-.. ..+ ....++....+++.|+.+|+.+.++..+.
T Consensus 92 tV~d~V~~GR~p~~--~~~----------------------------~~~~~~D~~~v~~aL~~~~~~~la~r~~~---- 137 (258)
T COG1120 92 TVYELVLLGRYPHL--GLF----------------------------GRPSKEDEEIVEEALELLGLEHLADRPVD---- 137 (258)
T ss_pred EEeehHhhcCCccc--ccc----------------------------cCCCHhHHHHHHHHHHHhCcHHHhcCccc----
Confidence 99999998743210 000 00011122357889999999999987775
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
.|||||||||.|||||+.+|++|+||||||+||...+.++++.+++++++. +.++|.++|+...+..+||++++|++|
T Consensus 138 -~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~-~~tvv~vlHDlN~A~ryad~~i~lk~G 215 (258)
T COG1120 138 -ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREK-GLTVVMVLHDLNLAARYADHLILLKDG 215 (258)
T ss_pred -ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 599999999999999999999999999999999999999999999999764 566667889999999999999999999
Q ss_pred eEEEEcChhhHH
Q 000562 385 QIVYQGPRVSVL 396 (1419)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1419)
+++.+|++++++
T Consensus 216 ~i~a~G~p~evl 227 (258)
T COG1120 216 KIVAQGTPEEVL 227 (258)
T ss_pred eEEeecCcchhc
Confidence 999999998875
No 64
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.9e-35 Score=399.04 Aligned_cols=208 Identities=26% Similarity=0.371 Sum_probs=180.1
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCcc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|+++.. ...++.+|||+|++.+++.+|
T Consensus 942 ~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~dI~~~~~~~r~~IG~~pQ~~~L~~~LT 1019 (2272)
T TIGR01257 942 GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKDIETNLDAVRQSLGMCPQHNILFHHLT 1019 (2272)
T ss_pred CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEECcchHHHHhhcEEEEecCCcCCCCCC
Confidence 4679999999999999999999999999999999999876 468999999988643 234567999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsg 998 (1419)
|+|++.|.++++.. ..++.++.++++++.++|.+..+..+ +.|||||||||+||+||+.+|+||+|||||+|
T Consensus 1020 V~E~L~f~~~lkg~---~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGGqKQRLsLArALi~~PkVLLLDEPTSG 1091 (2272)
T TIGR01257 1020 VAEHILFYAQLKGR---SWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSG 1091 (2272)
T ss_pred HHHHHHHHHHhcCC---CHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcC
Confidence 99999998776532 22334567889999999998887764 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCCchhHHHHHH
Q 000562 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYF 1065 (1419)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~~f 1065 (1419)
||+.+++.+++.|++++ +|+|||+++|+++ ++...+||+++|++ |+++..|+. ..+.+.|
T Consensus 1092 LDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~Gs~----~~Lk~~~ 1151 (2272)
T TIGR01257 1092 VDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSGTP----LFLKNCF 1151 (2272)
T ss_pred CCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEecCH----HHHHHhc
Confidence 99999999999999985 5999999999986 56678999999985 799999975 3455444
No 65
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.3e-39 Score=375.16 Aligned_cols=212 Identities=33% Similarity=0.474 Sum_probs=185.7
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC--CCCceEEEEccCCCCCCCC
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 224 (1419)
++.+|+|||+.+++|++++|+||||||||||||+|+|++.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 357999999999999999999999999999999999999885 99999999887652 3457899999999999999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||+|||.|.+.+.+.... ....+++++++.+||++..++.+
T Consensus 94 T~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~~~~~----- 134 (293)
T COG1131 94 TVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKANKKV----- 134 (293)
T ss_pred cHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhhCcch-----
Confidence 999999999888754310 01235788999999998544444
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
++||+||||||+||.||+++|+++||||||+|||+.++.++.+.|+++++. ++++|+..+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 579999999999999999999999999999999999999999999999875 4467777899999999999999999999
Q ss_pred eEEEEcChhhHHHHHHh
Q 000562 385 QIVYQGPRVSVLDFFAS 401 (1419)
Q Consensus 385 ~iv~~G~~~~~~~~F~~ 401 (1419)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999987765543
No 66
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.2e-39 Score=351.41 Aligned_cols=192 Identities=30% Similarity=0.458 Sum_probs=167.2
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------c-cccceEEEEccCCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------E-TFARISGYCEQNDIHS 914 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~-~~~~~~gyv~Q~d~~~ 914 (1419)
..+|++||++|++||++||||||||||||||++|.|... +.+|.|.++|.+... . -+++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~--pt~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDK--PTSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 579999999999999999999999999999999999877 468999999976532 1 2345799999999999
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccC-CcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSG-ALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~-~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
|.+||+||+.+...+.... ....++.++++++.+||.+..+ .. +..|||||||||+|||||+.+|+||+.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~~---~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGKS---AGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCCC---hhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 9999999999876554322 2245667889999999987665 43 4589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1045 (1419)
|||.+||+.++..|++.+++++++ |+|||++|||| ++...+||++.|.+|
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG 218 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDG 218 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCC
Confidence 999999999999999999999865 89999999996 477899999999974
No 67
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.7e-39 Score=341.48 Aligned_cols=210 Identities=24% Similarity=0.353 Sum_probs=179.9
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC------CceEEEEccCCCC
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQ 220 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~ 220 (1419)
.+.||+|||+.|++||+++|+|||||||||||+.|.|+++|+ +|+|.++|+++..... ++++|+++|+-.+
T Consensus 20 ~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gAL 96 (263)
T COG1127 20 DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGAL 96 (263)
T ss_pred CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeecccc
Confidence 357999999999999999999999999999999999999887 9999999999876543 4679999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1419)
|..+||+||+.|..+-... .|+. ..+..+..-|+..||... ++
T Consensus 97 FssltV~eNVafplre~~~-------------------lp~~--------------~i~~lv~~KL~~VGL~~~----~~ 139 (263)
T COG1127 97 FSSLTVFENVAFPLREHTK-------------------LPES--------------LIRELVLMKLELVGLRGA----AA 139 (263)
T ss_pred ccccchhHhhheehHhhcc-------------------CCHH--------------HHHHHHHHHHHhcCCChh----hh
Confidence 9999999999996543211 1111 122335556788999765 23
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 380 (1419)
+.++..||||++||+++|||++.+|+++|+||||+||||.++..+.+.++++.+.++ .|+++++|+.++++..+|+|++
T Consensus 140 ~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg-~T~i~VTHDl~s~~~i~Drv~~ 218 (263)
T COG1127 140 DLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALG-LTVIMVTHDLDSLLTIADRVAV 218 (263)
T ss_pred hhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhC-CEEEEEECChHHHHhhhceEEE
Confidence 456677999999999999999999999999999999999999999999999988775 4555699999999999999999
Q ss_pred EcCCeEEEEcChhhHHH
Q 000562 381 LSEGQIVYQGPRVSVLD 397 (1419)
Q Consensus 381 L~~G~iv~~G~~~~~~~ 397 (1419)
|.+|+|+.+|+++++.+
T Consensus 219 L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 219 LADGKVIAEGTPEELLA 235 (263)
T ss_pred EeCCEEEEeCCHHHHHh
Confidence 99999999999999864
No 68
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=371.43 Aligned_cols=208 Identities=27% Similarity=0.365 Sum_probs=186.6
Q ss_pred cccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-ccccceEEEEccCCCCC
Q 000562 836 GVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHS 914 (1419)
Q Consensus 836 ~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~ 914 (1419)
.+.++...+|+|||++|++||+++|+|||||||||||++|||... +.+|+|.|+|.+++. ....|.+++|+|+..++
T Consensus 10 ~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~vt~l~P~~R~iamVFQ~yALy 87 (338)
T COG3839 10 RKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDVTDLPPEKRGIAMVFQNYALY 87 (338)
T ss_pred EEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhHCCEEEEeCCcccc
Confidence 334444449999999999999999999999999999999999877 579999999998876 44568899999999999
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDE 994 (1419)
|++||+||+.|+.+.+. .++++.+++|+++.+.|+|.++.|.. +++|||||||||+|||||+++|++++|||
T Consensus 88 PhmtV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQrQRVAlaRAlVr~P~v~L~DE 159 (338)
T COG3839 88 PHMTVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQRQRVALARALVRKPKVFLLDE 159 (338)
T ss_pred CCCcHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhHHHHHHHHHHhcCCCEEEecC
Confidence 99999999999987763 35567788999999999999999986 35899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|.|+||+..+..+...|+++.++ |.|+|.+|||.. |...++||+++|. +|++...|++.
T Consensus 160 PlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~p~ 219 (338)
T COG3839 160 PLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGTPL 219 (338)
T ss_pred chhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCChH
Confidence 99999999999999999998755 899999999974 7889999999999 58999999864
No 69
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-39 Score=350.61 Aligned_cols=206 Identities=28% Similarity=0.438 Sum_probs=176.4
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccC---CCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQ---DWQVAEMT 225 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~---d~~~~~lT 225 (1419)
++|+|||+.+++|++++|+||||||||||+|+|.|.+.|. +|+|.++|.+......+..+|||||. |+-|| .|
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP-~t 93 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFP-IT 93 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCC-cC
Confidence 4999999999999999999999999999999999999876 99999999988777667899999994 55555 69
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+|.+..+..-+. ...+.. ..+....++++|+.+|+.+.+|..+|+
T Consensus 94 V~d~V~~g~~~~~--g~~~~~----------------------------~~~d~~~v~~aL~~Vgm~~~~~r~i~~---- 139 (254)
T COG1121 94 VKDVVLLGRYGKK--GWFRRL----------------------------NKKDKEKVDEALERVGMEDLRDRQIGE---- 139 (254)
T ss_pred HHHHHHccCcccc--cccccc----------------------------cHHHHHHHHHHHHHcCchhhhCCcccc----
Confidence 9999987632211 001100 011134689999999999999998885
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|.+.|+++.++ +.+|++++|+...+.+.||+|++|+. +
T Consensus 140 -LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln~-~ 215 (254)
T COG1121 140 -LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLNR-H 215 (254)
T ss_pred -cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEcC-e
Confidence 9999999999999999999999999999999999999999999999875 56677799999999999999999965 7
Q ss_pred EEEEcChhhHH
Q 000562 386 IVYQGPRVSVL 396 (1419)
Q Consensus 386 iv~~G~~~~~~ 396 (1419)
+++.|+++++.
T Consensus 216 ~~~~G~~~~~~ 226 (254)
T COG1121 216 LIASGPPEEVL 226 (254)
T ss_pred eEeccChhhcc
Confidence 88999998875
No 70
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-39 Score=347.46 Aligned_cols=192 Identities=24% Similarity=0.356 Sum_probs=170.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1419)
..+|+|||++|.+||+++|+|||||||||||++|+|+..|+ +|+|.++|.++ ..+...++||+|++.++|-+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v--~~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPV--TGPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccc--CCCCCCEEEEeccCcccchhhHH
Confidence 57999999999999999999999999999999999999876 99999999988 34667899999999999999999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000562 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1419)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1419)
||+.|+....+... .+...+++..|+.+||.+..|.. +..|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~~~-----P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFEDKY-----PHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhhcC-----cccc
Confidence 99999887654211 11123578899999999887754 5579
Q ss_pred ChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 308 SGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+.. +.||+.++|+.+|+..++|||++|+++
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~-~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEET-RKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 9999999999999999999999999999999999999999999988764 566777999999999999999999983
No 71
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-39 Score=335.83 Aligned_cols=221 Identities=25% Similarity=0.376 Sum_probs=181.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcC--CCCCeeeEEEECCccCCCCC-----CCceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 220 (1419)
+.+|+|||+.|+++++||++|||||||||||++|....+ +..+++|+|.++|+++-+.. .|+++|+|+|.|.-
T Consensus 20 ~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnP 99 (253)
T COG1117 20 KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNP 99 (253)
T ss_pred hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCC
Confidence 469999999999999999999999999999999987644 35678999999999886532 36899999999998
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcc-cccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTLV 299 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~v 299 (1419)
|| +|++||+.|+.+..|... +.+ +++++..|+.-+|-+ ..|.+
T Consensus 100 Fp-~SIydNVayG~r~~g~~~--~~l--------------------------------deiVe~sLk~AaLWdEVKDrL- 143 (253)
T COG1117 100 FP-MSIYDNVAYGLRLHGIKD--KEL--------------------------------DEIVESSLKKAALWDEVKDRL- 143 (253)
T ss_pred CC-chHHHHHHHhHHhhccch--HHH--------------------------------HHHHHHHHHHhHhHHHhHHHh-
Confidence 88 899999999998876532 111 123444455555532 23332
Q ss_pred cCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000562 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1419)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 379 (1419)
++...+|||||+||++|||||+-+|+||+||||||+|||.++.+|-+++.++.+ .-||++++|....+....|+..
T Consensus 144 -~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~ta 219 (253)
T COG1117 144 -HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDYTA 219 (253)
T ss_pred -hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHhhh
Confidence 123457999999999999999999999999999999999999999999999874 4667779999999999999999
Q ss_pred EEcCCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHH
Q 000562 380 LLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFL 416 (1419)
Q Consensus 380 lL~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl 416 (1419)
.+..|+++++|+.+++ |.-|.++...||.
T Consensus 220 Ff~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 220 FFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 9999999999999887 4567766666654
No 72
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=331.69 Aligned_cols=206 Identities=28% Similarity=0.342 Sum_probs=183.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1419)
..+++||||.++.||+++|+|||||||||+|++|++++.|+ +|+|+++|.+....+ .++.+|.++.+..++..||
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT 91 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLT 91 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhhh
Confidence 45899999999999999999999999999999999999887 999999999875433 3688999998888899999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
++|||.|.+++.+.. +.+.+.+++++.+.|+|..|.|+.+|+
T Consensus 92 ~rEnl~~Fa~L~~l~----------------------------------~~~~kari~~l~k~l~l~~~~~rRv~~---- 133 (245)
T COG4555 92 ARENLKYFARLNGLS----------------------------------RKEIKARIAELSKRLQLLEYLDRRVGE---- 133 (245)
T ss_pred HHHHHHHHHHHhhhh----------------------------------hhHHHHHHHHHHHHhChHHHHHHHHhh----
Confidence 999999988765321 122355788999999999999999985
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
+|-|+||||+|||||+.+|++++|||||||||..++..+.+.++++.. .+.+|+..+|..+|+.++||+|++|++|+
T Consensus 134 -~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~--egr~viFSSH~m~EvealCDrvivlh~Ge 210 (245)
T COG4555 134 -FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN--EGRAVIFSSHIMQEVEALCDRVIVLHKGE 210 (245)
T ss_pred -hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc--CCcEEEEecccHHHHHHhhheEEEEecCc
Confidence 999999999999999999999999999999999999999999998864 36677789999999999999999999999
Q ss_pred EEEEcChhhHHH
Q 000562 386 IVYQGPRVSVLD 397 (1419)
Q Consensus 386 iv~~G~~~~~~~ 397 (1419)
+++.|+.+++..
T Consensus 211 vv~~gs~~~l~~ 222 (245)
T COG4555 211 VVLEGSIEALDA 222 (245)
T ss_pred EEEcCCHHHHHH
Confidence 999999987753
No 73
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-39 Score=371.24 Aligned_cols=211 Identities=26% Similarity=0.376 Sum_probs=188.0
Q ss_pred cccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-ccccceEEEEccCCC
Q 000562 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDI 912 (1419)
Q Consensus 834 ~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~ 912 (1419)
+.++.++...+|+|||++|++||+++|+|||||||||||++|||... +.+|+|.++|.++.. ...+|.+|+|+|+..
T Consensus 10 ~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i~~lpp~kR~ig~VFQ~YA 87 (352)
T COG3842 10 NVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDITDVPPEKRPIGMVFQSYA 87 (352)
T ss_pred eeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhhcccceeecCcc
Confidence 34445667889999999999999999999999999999999999887 568999999998765 345788999999999
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+||+|||+||+.|+.+++. ....++.+++|+++++.++|.+.++.. +.+|||||||||+|||||+.+|++|+|
T Consensus 88 LFPHltV~~NVafGLk~~~--~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQqQRVALARAL~~~P~vLLL 160 (352)
T COG3842 88 LFPHMTVEENVAFGLKVRK--KLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQQRVALARALVPEPKVLLL 160 (352)
T ss_pred cCCCCcHHHHhhhhhhhcC--CCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHHHHHHHHHHhhcCcchhhh
Confidence 9999999999999987442 334456778999999999999988876 458999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|||.|+||..-+..+..-++++.++ |.|.|++|||.. +...++|||.+|++ |++...|++.
T Consensus 161 DEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gtP~ 222 (352)
T COG3842 161 DEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGTPE 222 (352)
T ss_pred cCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCCHH
Confidence 9999999999999999999999754 999999999976 78899999999985 8999999864
No 74
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-38 Score=334.71 Aligned_cols=215 Identities=25% Similarity=0.355 Sum_probs=180.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC------CceEEEEccCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 221 (1419)
+++|+|||+.|++||+++|+|||||||||||++|.|..+++ +|+|.+||.++..... ++.+||++|++.+.
T Consensus 17 ~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv 93 (258)
T COG3638 17 HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLV 93 (258)
T ss_pred ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCcc
Confidence 47999999999999999999999999999999999988776 9999999988765542 47899999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+.+||.||+..+..-+ .+.+ ....+..+. +.+..+-..|+.+|+.+.+.+..+
T Consensus 94 ~r~sv~~NVl~grl~~--~s~~---------~slfglfsk---------------~dk~~Al~aLervgi~~~A~qra~- 146 (258)
T COG3638 94 PRLSVLENVLLGRLGY--TSTW---------RSLFGLFSK---------------EDKAQALDALERVGILDKAYQRAS- 146 (258)
T ss_pred cccHHHHHHHhhhccc--chHH---------HHHhCCCCH---------------HHHHHHHHHHHHcCcHHHHHHHhc-
Confidence 9999999998864321 1111 112222222 223445678999999998887776
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
+|||||+|||+|||||+.+|++++-|||+++||+.++.++++.|++++...| .|++..+|..+-+.++||||+-|
T Consensus 147 ----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g-~Tvi~nLH~vdlA~~Y~~Riigl 221 (258)
T COG3638 147 ----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDG-ITVIVNLHQVDLAKKYADRIIGL 221 (258)
T ss_pred ----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcC-CEEEEEechHHHHHHHHhhheEe
Confidence 4999999999999999999999999999999999999999999999998754 45555778889999999999999
Q ss_pred cCCeEEEEcChhhHHH
Q 000562 382 SEGQIVYQGPRVSVLD 397 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~~ 397 (1419)
++|+|+|.||++++-+
T Consensus 222 ~~G~ivfDg~~~el~~ 237 (258)
T COG3638 222 KAGRIVFDGPASELTD 237 (258)
T ss_pred cCCcEEEeCChhhhhH
Confidence 9999999999988653
No 75
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-39 Score=331.22 Aligned_cols=206 Identities=26% Similarity=0.361 Sum_probs=178.2
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCC---CCceEEEEEEECCccCCc-----ccccceEEEEccCC
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK---TGGIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~---~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d 911 (1419)
+.+++|+|||+.|++++++|++|||||||||||++|.+.. ++-.++|+|.++|.++.. ..+|+.+|.|+|.|
T Consensus 18 g~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkP 97 (253)
T COG1117 18 GDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKP 97 (253)
T ss_pred CchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCC
Confidence 5678999999999999999999999999999999999853 234678999999987643 35788999999999
Q ss_pred CCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 000562 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1419)
Q Consensus 912 ~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~il 990 (1419)
.-|| +|++||+.|+.++..-.+ ++-++.|++.++...|.+ ..|.+-.. ..+|||||+|||||||+|+.+|+||
T Consensus 98 nPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s--a~~LSGGQQQRLcIARalAv~PeVl 171 (253)
T COG1117 98 NPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS--ALGLSGGQQQRLCIARALAVKPEVL 171 (253)
T ss_pred CCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--ccCCChhHHHHHHHHHHHhcCCcEE
Confidence 9999 999999999988775433 566778899888888864 34444322 3479999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+||||||+|||.+...|.++|.+|+ +.-|||++||.+. ...+..|+...+.. |+++.+|+.
T Consensus 172 LmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G~LvE~g~T 232 (253)
T COG1117 172 LMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-GELVEFGPT 232 (253)
T ss_pred EecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-cEEEEEcCH
Confidence 9999999999999999999999997 5799999999986 57788999999986 799999996
No 76
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.9e-38 Score=339.08 Aligned_cols=196 Identities=27% Similarity=0.430 Sum_probs=166.9
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-------CceEEEEccCCC
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1419)
..++|+|||+.|++||+++|+|||||||||||++|+|...|+ +|+|.++|.++..... ++.+|||+|+..
T Consensus 17 ~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~n 93 (226)
T COG1136 17 KVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFN 93 (226)
T ss_pred ceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCC
Confidence 368999999999999999999999999999999999998875 9999999998876542 367999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccc-cc
Q 000562 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCAD-TL 298 (1419)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d-t~ 298 (1419)
++|++||+||+..+..+.+.... .....++.+++.+||.+..+ ..
T Consensus 94 Ll~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~~~ 139 (226)
T COG1136 94 LLPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLKKK 139 (226)
T ss_pred CCCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhccCC
Confidence 99999999999987665543211 01234678899999987655 44
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
+ ..|||||||||+|||||+.+|++++.||||.+||+.++..|++.++++++.. ++++++++|+ +++...|||+
T Consensus 140 p-----~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~-g~tii~VTHd-~~lA~~~dr~ 212 (226)
T COG1136 140 P-----SELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKER-GKTIIMVTHD-PELAKYADRV 212 (226)
T ss_pred c-----hhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhc-CCEEEEEcCC-HHHHHhCCEE
Confidence 4 4699999999999999999999999999999999999999999999998764 5556656666 5677899999
Q ss_pred EEEcCCeE
Q 000562 379 ILLSEGQI 386 (1419)
Q Consensus 379 ilL~~G~i 386 (1419)
+.|.+|++
T Consensus 213 i~l~dG~~ 220 (226)
T COG1136 213 IELKDGKI 220 (226)
T ss_pred EEEeCCee
Confidence 99999994
No 77
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.3e-38 Score=366.11 Aligned_cols=203 Identities=29% Similarity=0.400 Sum_probs=178.4
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCc
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~l 917 (1419)
++..+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+|||+|++.+++.+
T Consensus 18 ~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~ 95 (306)
T PRK13537 18 GDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDF 95 (306)
T ss_pred CCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEecccchHHHHhcEEEEeccCcCCCCC
Confidence 34679999999999999999999999999999999999876 468999999998643 23567899999999999999
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
||+|++.|.+.++. ....+..++++++++.++|.+..++.+ ++||+|||||++||+||+.+|++|+|||||+
T Consensus 96 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~aL~~~P~lllLDEPt~ 167 (306)
T PRK13537 96 TVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGMKRRLTLARALVNDPDVLVLDEPTT 167 (306)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCc
Confidence 99999998776542 223334456789999999988887765 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+.++..+.+.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 168 gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~~ 222 (306)
T PRK13537 168 GLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGAP 222 (306)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 99999999999999999878999999999986 57788999999985 799999985
No 78
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.5e-38 Score=319.43 Aligned_cols=201 Identities=27% Similarity=0.365 Sum_probs=175.6
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEEEccCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~~~ 914 (1419)
+..+|+||||+|++||++-|+||||||||||||+|.+... +..|+|.++|+++.. .-.+|.+|+|+||..+.
T Consensus 14 g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 14 GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 3569999999999999999999999999999999999766 568999999998643 23578999999999999
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDE 994 (1419)
++.||+||+.|...... .+..+.+++|.++++.+||.+.++.+ +..|||||+||++||||++.+|++|+.||
T Consensus 92 ~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LSGGEQQRvaIARAiV~~P~vLlADE 163 (223)
T COG2884 92 PDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLSGGEQQRVAIARAIVNQPAVLLADE 163 (223)
T ss_pred ccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccCchHHHHHHHHHHHccCCCeEeecC
Confidence 99999999999876653 34456677899999999999988776 45899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhc-CeEEEEecCCEEEEeCCC
Q 000562 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESF-DELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~-D~v~~l~~gG~~~~~G~~ 1054 (1419)
||-+||+..+..|++++.++.+.|.|||+.|||. ++.+.. .+++.|.+ |+++.+...
T Consensus 164 PTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~--~lv~~~~~rvl~l~~-Grl~~d~~~ 221 (223)
T COG2884 164 PTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDL--ELVNRMRHRVLALED-GRLVRDESR 221 (223)
T ss_pred CCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccH--HHHHhccCcEEEEeC-CEEEecccc
Confidence 9999999999999999999999999999999995 455544 67888875 788876543
No 79
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-38 Score=380.41 Aligned_cols=214 Identities=26% Similarity=0.416 Sum_probs=177.3
Q ss_pred cCCCcceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCC
Q 000562 142 RGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQD 218 (1419)
Q Consensus 142 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d 218 (1419)
++.+++.+||+|+|++|+|||.+||+|||||||||+.+.|-.+++|. +|+|++||+|+.+.++ ++.+|+|.|+|
T Consensus 475 YP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEP 551 (716)
T KOG0058|consen 475 YPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEP 551 (716)
T ss_pred cCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccc
Confidence 55667789999999999999999999999999999999999999886 9999999999998876 58999999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccc
Q 000562 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1419)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1419)
.+|. .||+|||.|+.. ....+.+..+++.. ...+. +.++++.+||.
T Consensus 552 vLFs-~sI~eNI~YG~~----~~t~e~i~~AAk~A--------------------------Nah~F---I~~~p~gY~T~ 597 (716)
T KOG0058|consen 552 VLFS-GSIRENIAYGLD----NATDEEIEAAAKMA--------------------------NAHEF---ITNFPDGYNTV 597 (716)
T ss_pred eeec-ccHHHHHhcCCC----CCCHHHHHHHHHHh--------------------------ChHHH---HHhCccccccc
Confidence 9775 599999999754 11112222222110 01122 34689999999
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
||+++. .||||||||++|||||+++|+||+|||.||+||+.+...+.+.|.+..+ +.||++|.|..+ +.+.+|+|
T Consensus 598 VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~---~rTVlvIAHRLS-TV~~Ad~I 672 (716)
T KOG0058|consen 598 VGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ---GRTVLVIAHRLS-TVRHADQI 672 (716)
T ss_pred cCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc---CCeEEEEehhhh-HhhhccEE
Confidence 998665 6999999999999999999999999999999999999999999987754 355555766654 55789999
Q ss_pred EEEcCCeEEEEcChhhHHH
Q 000562 379 ILLSEGQIVYQGPRVSVLD 397 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~~ 397 (1419)
+++++|++++.|+++|+++
T Consensus 673 vvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 673 VVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred EEEcCCeEEecccHHHHhh
Confidence 9999999999999999874
No 80
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.1e-37 Score=362.83 Aligned_cols=206 Identities=22% Similarity=0.345 Sum_probs=178.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC------CceEEEEccCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 221 (1419)
+++|+|||+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999876 9999999998876532 46799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+.+||+||+.|+....+... .+...++.++++.+||++..|..+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~~-- 138 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSYP-- 138 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998654322110 011234678899999998777655
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
+.|||||||||+|||||+.+|++|+|||||||||+.++..+.+.|+++.+.. +.+|+.++|+.+.+.++||+|++|
T Consensus 139 ---~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~-g~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 139 ---SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRL-GLTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999987654 455666899999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|++++.|+.+++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998873
No 81
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7.5e-39 Score=327.05 Aligned_cols=213 Identities=22% Similarity=0.322 Sum_probs=187.6
Q ss_pred ccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc----cccceEEEEc
Q 000562 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCE 908 (1419)
Q Consensus 833 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~ 908 (1419)
++..+++++++++++||+.+++||+++|+|||||||||.+.++.|... +.+|.|.+||.+++.. ..+.-+||.|
T Consensus 8 ~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLp 85 (243)
T COG1137 8 ENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLP 85 (243)
T ss_pred hhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCccccc
Confidence 345566788999999999999999999999999999999999999876 4689999999987642 2234589999
Q ss_pred cCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000562 909 QNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1419)
Q Consensus 909 Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ 988 (1419)
|++..|-.+||+||++-....+.. +....+++++.+++++.+++.|+++... ..||||||||+.|||||+.+|+
T Consensus 86 QE~SIFr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~ 159 (243)
T COG1137 86 QEASIFRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPK 159 (243)
T ss_pred ccchHhhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCC
Confidence 999999999999999877666532 2233456667889999999999999763 3699999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
.++||||.+|+||-+...|.++++.|++.|.-|++|-|... +....+||.+++.+ |++...|.++
T Consensus 160 fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 160 FILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred EEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 99999999999999999999999999999999999999987 78899999999996 7999999864
No 82
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.3e-37 Score=390.64 Aligned_cols=256 Identities=30% Similarity=0.455 Sum_probs=202.2
Q ss_pred hHhhHHHHHHHhhcccCChHHHHHHHHHHHHhcCCCCCC--cEEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHH
Q 000562 61 VQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLELPK--IEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQL 138 (1419)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 138 (1419)
.++-+...+|+.++.+.++|.-.. +.....|+ =+++|+|+++.=
T Consensus 436 ~q~~~~~~~rL~dil~~~~E~~~~-------~~~~~~~~~~g~I~~~nvsf~y--------------------------- 481 (709)
T COG2274 436 FQQAKVALERLGDILDTPPEQEGD-------KTLIHLPKLQGEIEFENVSFRY--------------------------- 481 (709)
T ss_pred HHHHHHHHHHHHHHhcCCcccccc-------cccccccccCceEEEEEEEEEe---------------------------
Confidence 467888899999999988883211 11123333 479999999652
Q ss_pred HHhcCCCcceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEc
Q 000562 139 RIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVS 215 (1419)
Q Consensus 139 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~ 215 (1419)
.. .+..+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||+++++..+ ++.++||+
T Consensus 482 ----~~-~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~ 553 (709)
T COG2274 482 ----GP-DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVL 553 (709)
T ss_pred ----CC-CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEc
Confidence 11 1226999999999999999999999999999999999999886 9999999999988765 58999999
Q ss_pred cCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccc
Q 000562 216 QQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 295 (1419)
Q Consensus 216 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 295 (1419)
|++.+| +.||+|||.++.. ....+.+.++|+ +.+. .+. +..++..+
T Consensus 554 Q~~~Lf-~gSI~eNi~l~~p----~~~~e~i~~A~~---------------------~ag~-----~~f---I~~lP~gy 599 (709)
T COG2274 554 QDPFLF-SGSIRENIALGNP----EATDEEIIEAAQ---------------------LAGA-----HEF---IENLPMGY 599 (709)
T ss_pred ccchhh-cCcHHHHHhcCCC----CCCHHHHHHHHH---------------------HhCc-----HHH---HHhccccc
Confidence 999855 5699999988642 111222222222 1111 111 44689999
Q ss_pred cccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhc
Q 000562 296 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 375 (1419)
Q Consensus 296 dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 375 (1419)
||.||+ +..+||||||||++|||||+++|+||+||||||+||+.+...|.+.|.++.+ ++|+|+ ++|. ..+.+.+
T Consensus 600 ~t~v~E-~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~-IaHR-l~ti~~a 674 (709)
T COG2274 600 DTPVGE-GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVII-IAHR-LSTIRSA 674 (709)
T ss_pred cccccc-CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEE-EEcc-chHhhhc
Confidence 999996 4568999999999999999999999999999999999999999999998864 455555 4444 4567899
Q ss_pred CeEEEEcCCeEEEEcChhhHHH
Q 000562 376 DDVILLSEGQIVYQGPRVSVLD 397 (1419)
Q Consensus 376 D~vilL~~G~iv~~G~~~~~~~ 397 (1419)
|+|++|++|+++.+|+++|+.+
T Consensus 675 drIiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 675 DRIIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred cEEEEccCCceeccCCHHHHHH
Confidence 9999999999999999999875
No 83
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-37 Score=348.31 Aligned_cols=203 Identities=27% Similarity=0.376 Sum_probs=173.7
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEEEccCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~~~ 914 (1419)
.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.++
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 12 GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 3569999999999999999999999999999999999876 468999999987542 23456799999999999
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDE 994 (1419)
+.+||+|++.+...... ....++..+.++++++.+++.+..+..+ ..|||||||||+||++|+.+|+||+|||
T Consensus 90 ~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~llllDE 162 (235)
T cd03261 90 DSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSGGMKKRVALARALALDPELLLYDE 162 (235)
T ss_pred CCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecC
Confidence 99999999988653221 1233344567888999999987766654 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 163 Pt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 221 (235)
T cd03261 163 PTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVAEGTP 221 (235)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEEecCH
Confidence 99999999999999999999864 899999999986 46778999999985 799998875
No 84
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-37 Score=366.22 Aligned_cols=203 Identities=25% Similarity=0.349 Sum_probs=178.8
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-ccccceEEEEccCCCCCCCccH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++.++|++||
T Consensus 16 ~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 16 KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 4579999999999999999999999999999999999876 568999999987643 2234789999999999999999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+||+.|....+. .+..+..++++++++.++|.+..+..+ ..|||||||||+|||||+.+|++|+||||||+|
T Consensus 94 ~eNi~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~QRvalARAL~~~P~llLLDEP~s~L 165 (356)
T PRK11650 94 RENMAYGLKIRG---MPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQRVAMGRAIVREPAVFLFDEPLSNL 165 (356)
T ss_pred HHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999999865432 234455567899999999998887764 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|+.++..+.+.|+++.++ |.|+|++|||+. ++...+|++++|++ |+++..|+..
T Consensus 166 D~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~~ 220 (356)
T PRK11650 166 DAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTPV 220 (356)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCHH
Confidence 999999999999999765 899999999986 68889999999985 8999999863
No 85
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.3e-37 Score=365.30 Aligned_cols=204 Identities=26% Similarity=0.391 Sum_probs=179.8
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-ccccceEEEEccCCCCCCCcc
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
+.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...+|.+|||+|+..++|++|
T Consensus 15 ~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~t 92 (353)
T TIGR03265 15 GAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLT 92 (353)
T ss_pred CCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCc
Confidence 34579999999999999999999999999999999999876 568999999987643 234577999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsg 998 (1419)
|+||+.|+...+ ..+..+.+++++++++.++|.++.+... ..|||||||||+|||+|+.+|++++|||||||
T Consensus 93 v~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~ 164 (353)
T TIGR03265 93 VADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQQRVALARALATSPGLLLLDEPLSA 164 (353)
T ss_pred HHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 999999986543 2334555678899999999999887654 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
||+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|++ |+++..|++.
T Consensus 165 LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~~~ 220 (353)
T TIGR03265 165 LDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGTPQ 220 (353)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 9999999999999998765 899999999986 68889999999985 7999999863
No 86
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-37 Score=364.76 Aligned_cols=206 Identities=27% Similarity=0.370 Sum_probs=179.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1419)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+++ +|+|.++|.++....+ ++.++||+|++.+++++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 35999999999999999999999999999999999998876 9999999998876543 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1419)
+||+.|+.+..+.. + .+...+++++++.+||++..|..+ +.
T Consensus 94 ~eNi~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 134 (356)
T PRK11650 94 RENMAYGLKIRGMP----------K------------------------AEIEERVAEAARILELEPLLDRKP-----RE 134 (356)
T ss_pred HHHHHhHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hh
Confidence 99999976532210 0 011234678999999988777655 46
Q ss_pred CChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000562 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1419)
Q Consensus 307 LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 386 (1419)
|||||||||+|||||+.+|++|+||||||+||+.++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRL-KTTSLYVTHDQVEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999987643 56677799999999999999999999999
Q ss_pred EEEcChhhHH
Q 000562 387 VYQGPRVSVL 396 (1419)
Q Consensus 387 v~~G~~~~~~ 396 (1419)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999998874
No 87
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-37 Score=328.38 Aligned_cols=205 Identities=25% Similarity=0.307 Sum_probs=175.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC----CCceEEEEccCC--CCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQD--WQVA 222 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d--~~~~ 222 (1419)
++|+|||+++.+||..+|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+-+|+||+ .+-|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 6999999999999999999999999999999999999886 999999998776543 357889999997 4678
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
..||++.|.-+.+..+.+ +.+.++.++|+.+||+...- ++
T Consensus 98 ~~tv~~~l~Epl~~~~~~------------------------------------~~~~~i~~~L~~VgL~~~~l----~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLS------------------------------------KSQQRIAELLDQVGLPPSFL----DR 137 (252)
T ss_pred chhHHHHHhhhhccCCcc------------------------------------HHHHHHHHHHHHcCCCHHHH----hc
Confidence 899999987554432211 11233678899999986432 34
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
.+..|||||||||+|||||..+|++|++|||||+||++.+.+|++.|.++.+.. +.+.+.++|+..-+..+||||++|+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~-~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKER-GLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhc-CceEEEEeCcHHHHHHHhhheeeee
Confidence 556799999999999999999999999999999999999999999999998764 5667779999999999999999999
Q ss_pred CCeEEEEcChhhHHH
Q 000562 383 EGQIVYQGPRVSVLD 397 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1419)
+|++++.++.+++.+
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999998864
No 88
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.2e-37 Score=361.30 Aligned_cols=201 Identities=26% Similarity=0.324 Sum_probs=176.4
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc------cccceEEEEccCCCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHSP 915 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~d~~~~ 915 (1419)
..+|+|||+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|+..+++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~ 95 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLS 95 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccc
Confidence 479999999999999999999999999999999999876 5689999999876431 23567999999999999
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
..||+||+.|....+. .+.++.++++.++++.+||.+..|... +.|||||||||+|||||+.+|++|+||||
T Consensus 96 ~~tv~eni~~~~~~~~---~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LSgGqkQRV~IARAL~~~P~iLLlDEP 167 (343)
T TIGR02314 96 SRTVFGNVALPLELDN---TPKDEIKRKVTELLALVGLGDKHDSYP-----SNLSGGQKQRVAIARALASNPKVLLCDEA 167 (343)
T ss_pred cCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 9999999998765431 234455667899999999998877654 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||+||+.++..+++.|+++.++ |.|||+++|+++ .+.+.||++++|++ |+++..|+.
T Consensus 168 ts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv~~g~~ 225 (343)
T TIGR02314 168 TSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELIEQGTV 225 (343)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 9999999999999999999865 999999999976 46688999999985 899999985
No 89
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-37 Score=362.99 Aligned_cols=203 Identities=25% Similarity=0.402 Sum_probs=179.4
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc-cccceEEEEccCCCCCCCccH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
+..+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... ..+|.+|||+|+..++|++||
T Consensus 18 ~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 18 SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 4568999999999999999999999999999999999876 5689999999876532 235789999999999999999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+||+.|+...+. ....+.+++++++++.++|.++.+... ..|||||||||+|||+|+.+|++|+|||||+||
T Consensus 96 ~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~L 167 (351)
T PRK11432 96 GENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQQRVALARALILKPKVLLFDEPLSNL 167 (351)
T ss_pred HHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999999875542 334556678899999999998877653 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|++ |+++..|++.
T Consensus 168 D~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~~~ 222 (351)
T PRK11432 168 DANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGSPQ 222 (351)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 999999999999999765 899999999986 68889999999985 7999999863
No 90
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-37 Score=362.19 Aligned_cols=206 Identities=25% Similarity=0.373 Sum_probs=179.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1419)
..+|+|+|+++++||+++|+|||||||||||++|+|+.+++ +|+|.++|.++....+ +|.++||+|+..+++++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 35899999999999999999999999999999999999876 9999999998876544 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1419)
+||+.|+.+.++... .+.+.+++++++.+||.+..|..+ +.
T Consensus 96 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r~~-----~~ 136 (351)
T PRK11432 96 GENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDRYV-----DQ 136 (351)
T ss_pred HHHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999999865432110 011235788999999988776554 46
Q ss_pred CChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000562 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1419)
Q Consensus 307 LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 386 (1419)
|||||||||+|||||+.+|++|+||||++|||+.++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQF-NITSLYVTHDQSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987644 45667799999999999999999999999
Q ss_pred EEEcChhhHH
Q 000562 387 VYQGPRVSVL 396 (1419)
Q Consensus 387 v~~G~~~~~~ 396 (1419)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999998873
No 91
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=4.1e-37 Score=361.26 Aligned_cols=204 Identities=26% Similarity=0.361 Sum_probs=178.1
Q ss_pred ccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCC
Q 000562 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPG 916 (1419)
Q Consensus 839 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~ 916 (1419)
++++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.
T Consensus 51 y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~ 128 (340)
T PRK13536 51 YGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVPVPARARLARARIGVVPQFDNLDLE 128 (340)
T ss_pred ECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEECCcchHHHhccEEEEeCCccCCCC
Confidence 345679999999999999999999999999999999999876 468999999987643 2346679999999999999
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
+||+|++.|.+.++. ....+..+.++++++.++|.+..++.+ +.||||||||++||++|+.+|++|+|||||
T Consensus 129 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~kqrv~lA~aL~~~P~lLiLDEPt 200 (340)
T PRK13536 129 FTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGGMKRRLTLARALINDPQLLILDEPT 200 (340)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 999999997665442 222334456788999999998887765 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 201 ~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g~~ 256 (340)
T PRK13536 201 TGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEGRP 256 (340)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999878999999999986 57788999999985 799999985
No 92
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.9e-37 Score=358.66 Aligned_cols=203 Identities=27% Similarity=0.382 Sum_probs=177.2
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCc
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~l 917 (1419)
+++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++.+++.+
T Consensus 4 ~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 81 (302)
T TIGR01188 4 GDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDL 81 (302)
T ss_pred CCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCC
Confidence 34579999999999999999999999999999999999876 468999999987643 23456799999999999999
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
||+|++.+.+.++. ....+.++.++++++.++|.+..+..+ +.|||||||||+||+||+.+|++|+|||||+
T Consensus 82 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 82 TGRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99999998766542 223334556889999999988777764 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 99999999999999999878999999999986 57788999999985 799999985
No 93
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.2e-37 Score=362.55 Aligned_cols=206 Identities=25% Similarity=0.355 Sum_probs=179.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCee--eEEEECCccCCCCCC-CceEEEEccCCCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVS--GKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~--G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 225 (1419)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ + |+|.++|+++....+ ++.++||+|++.+++++|
T Consensus 19 ~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~t 95 (362)
T TIGR03258 19 TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLK 95 (362)
T ss_pred EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCc
Confidence 5999999999999999999999999999999999999876 7 999999998865443 467999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+||+.|+.+..+... .+.+.+++++++.+||++..|+.++
T Consensus 96 v~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~~~~----- 136 (362)
T TIGR03258 96 VEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAHLPA----- 136 (362)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhCChh-----
Confidence 9999999765332110 0112347889999999988776654
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|+
T Consensus 137 ~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~ 216 (362)
T TIGR03258 137 QLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGR 216 (362)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999998765435677779999999999999999999999
Q ss_pred EEEEcChhhHH
Q 000562 386 IVYQGPRVSVL 396 (1419)
Q Consensus 386 iv~~G~~~~~~ 396 (1419)
++..|+++++.
T Consensus 217 i~~~g~~~~~~ 227 (362)
T TIGR03258 217 LAAHGEPQALY 227 (362)
T ss_pred EEEEcCHHHHH
Confidence 99999999874
No 94
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=5.3e-37 Score=362.16 Aligned_cols=206 Identities=26% Similarity=0.412 Sum_probs=179.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1419)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ +|.++||+|+..+||++||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 35899999999999999999999999999999999998876 9999999998865443 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1419)
+||+.|+.+.++.. + .+....++++++.+||++..|..+ +.
T Consensus 94 ~eNi~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~l~L~~~~~~~~-----~~ 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMG----------R------------------------AEVAERVAELLDLVGLPGSERKYP-----GQ 134 (353)
T ss_pred HHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCCchhhCCh-----hh
Confidence 99999976532110 0 011235788999999998877655 46
Q ss_pred CChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000562 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1419)
Q Consensus 307 LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 386 (1419)
|||||||||+|||||+.+|++++||||+++||..++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-~~tvi~vTHd~~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRL-GVTTIMVTHDQEEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987654 45666789999999999999999999999
Q ss_pred EEEcChhhHH
Q 000562 387 VYQGPRVSVL 396 (1419)
Q Consensus 387 v~~G~~~~~~ 396 (1419)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (353)
T TIGR03265 214 EQVGTPQEIY 223 (353)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 95
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.8e-37 Score=310.49 Aligned_cols=201 Identities=25% Similarity=0.374 Sum_probs=174.7
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCHHHHHH
Q 000562 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTVRETLD 231 (1419)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1419)
..++.|++||+++|+|||||||||||+.|+|+..|. +|+|.+||.+.+...| +|-+++++|+..+|.++||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 468899999999999999999999999999999776 9999999999887665 588999999999999999999998
Q ss_pred HhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCChHH
Q 000562 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1419)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1419)
++.. ++-+.+ . +....++.++..+||..+.+.+.+ .|||||
T Consensus 94 LGl~---P~LkL~------a-------------------------~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGq 134 (231)
T COG3840 94 LGLS---PGLKLN------A-------------------------EQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQ 134 (231)
T ss_pred ccCC---cccccC------H-------------------------HHHHHHHHHHHHhChhhHhhhCcc-----ccCchH
Confidence 8643 221111 0 113357889999999999887765 599999
Q ss_pred hHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcC
Q 000562 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGP 391 (1419)
Q Consensus 312 kkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~ 391 (1419)
||||++||+|+++.+|++||||+|+||+.-+.+....+.+++.+.+ .|+++++|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~-~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERK-MTLLMVTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 9999999999999999999999999999999999999999998754 555568888899999999999999999999999
Q ss_pred hhhHH
Q 000562 392 RVSVL 396 (1419)
Q Consensus 392 ~~~~~ 396 (1419)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 87764
No 96
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4.7e-37 Score=362.91 Aligned_cols=203 Identities=27% Similarity=0.344 Sum_probs=178.6
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEE--EEEEECCccCCc-ccccceEEEEccCCCCCCCc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIE--GDIYISGYPKRQ-ETFARISGYCEQNDIHSPGL 917 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~--G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~l 917 (1419)
+..+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+ |+|.++|.+... ...+|.+|||+|+..++|++
T Consensus 17 ~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~--p~~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 17 ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVK--AAGLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 4569999999999999999999999999999999999876 457 999999987643 22356799999999999999
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
||+||+.|....+ .....+.+++++++++.++|.+..+..+ +.|||||||||+|||||+.+|++|+|||||+
T Consensus 95 tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgGq~QRvaLARAL~~~P~llLLDEP~s 166 (362)
T TIGR03258 95 KVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGGMQQRIAIARAIAIEPDVLLLDEPLS 166 (362)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccc
Confidence 9999999986543 2334455667899999999998888764 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhc--CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNT--GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~--g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++..|+..
T Consensus 167 ~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~~g~~~ 224 (362)
T TIGR03258 167 ALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAAHGEPQ 224 (362)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 99999999999999999876 799999999986 67888999999985 7999999853
No 97
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.1e-36 Score=354.34 Aligned_cols=206 Identities=29% Similarity=0.379 Sum_probs=178.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1419)
..+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 36999999999999999999999999999999999999876 999999999875432 2467999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+||+.|.++..+... .+...+++.+++.+||.+.+++.++
T Consensus 97 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 137 (306)
T PRK13537 97 VRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVG----- 137 (306)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchh-----
Confidence 9999997655432110 0012246778999999988888775
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
+|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ .+++|+.++|...++.++||+|++|++|+
T Consensus 138 ~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 138 ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999864 25677778999999999999999999999
Q ss_pred EEEEcChhhHHH
Q 000562 386 IVYQGPRVSVLD 397 (1419)
Q Consensus 386 iv~~G~~~~~~~ 397 (1419)
+++.|+++++..
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999988754
No 98
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=9.2e-37 Score=359.13 Aligned_cols=206 Identities=22% Similarity=0.302 Sum_probs=179.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-------CceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1419)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|. +|+|.++|.++....+ ++.++||+|++.+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 46999999999999999999999999999999999999876 9999999999876543 4689999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1419)
++++||+||+.|+.+..+... .+...++.++++.+||++..++.++
T Consensus 83 ~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~p~ 128 (363)
T TIGR01186 83 FPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRYPD 128 (363)
T ss_pred CCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCChh
Confidence 999999999998765432110 0012346788999999887776654
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 380 (1419)
.|||||||||+|||||+.+|++++|||||+|||+.++.++.+.++++.+.. +.+|+.++|+..++..++|+|++
T Consensus 129 -----~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~-~~Tii~vTHd~~ea~~~~drI~v 202 (363)
T TIGR01186 129 -----ELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATL-QKTIVFITHDLDEAIRIGDRIVI 202 (363)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEE
Confidence 599999999999999999999999999999999999999999999986543 45677799999999999999999
Q ss_pred EcCCeEEEEcChhhHH
Q 000562 381 LSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1419)
|++|+++..|+++++.
T Consensus 203 l~~G~iv~~g~~~ei~ 218 (363)
T TIGR01186 203 MKAGEIVQVGTPDEIL 218 (363)
T ss_pred EeCCEEEeeCCHHHHH
Confidence 9999999999998875
No 99
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-37 Score=328.69 Aligned_cols=214 Identities=28% Similarity=0.389 Sum_probs=185.9
Q ss_pred ccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc----cccceEEEEc
Q 000562 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCE 908 (1419)
Q Consensus 833 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~ 908 (1419)
++.++..+...+++|||+++++||++||+||||||||||+|+|+|..+ +.+|+|.++|.++... ..+.-++..+
T Consensus 8 ~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTF 85 (250)
T COG0411 8 RGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTF 85 (250)
T ss_pred ccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeec
Confidence 445556778899999999999999999999999999999999999877 5689999999986542 2345688899
Q ss_pred cCCCCCCCccHHHHHHHHhhhc--------CCCC-CcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHH
Q 000562 909 QNDIHSPGLTVLESLLFSAWLR--------LPSE-IELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTI 979 (1419)
Q Consensus 909 Q~d~~~~~lTv~E~l~f~a~lr--------~~~~-~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~i 979 (1419)
|...++++|||.||+..++..+ .+.. ...++..+++.++++.+||.+.+|...| +||+||||||.|
T Consensus 86 Q~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEI 160 (250)
T COG0411 86 QITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEI 160 (250)
T ss_pred ccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHH
Confidence 9999999999999998875533 1211 1234556788999999999999999875 699999999999
Q ss_pred HHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 980 AVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 980 A~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
||||+++|++|+||||.+||.+.....+.+.|+++.++ |.||+++-||++. ++..||||+||+. |+++..|++.
T Consensus 161 ArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 161 ARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred HHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCHH
Confidence 99999999999999999999999999999999999874 6999999999985 8899999999985 8999999874
No 100
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-37 Score=338.81 Aligned_cols=200 Identities=31% Similarity=0.435 Sum_probs=170.1
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-ccccceEEEEccCCCCCCCccH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 12 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 12 SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 3569999999999999999999999999999999999866 468999999987643 2234579999999988889999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+|++.+...... ......++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++++|||||+||
T Consensus 90 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~~lllDEPt~~L 161 (213)
T cd03259 90 AENIAFGLKLRG---VPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQRVALARALAREPSLLLLDEPLSAL 161 (213)
T ss_pred HHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999988654321 222334456788999999987766654 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
|+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 162 D~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 162 DAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999764 899999999986 46788999999986 7887655
No 101
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-37 Score=336.53 Aligned_cols=207 Identities=27% Similarity=0.385 Sum_probs=181.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCC----CCCCCceEEEEccCC-CCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFK----EFVPPRTSAYVSQQD-WQVA 222 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 222 (1419)
..+|+|+|+.+++|+.++|+||||||||||+++|+|.+.|. +|+|.++|.+.. ....++.+|||+|+| ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999886 899999999865 223468899999995 5677
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
.-||.|.++|+.+..+... .+...+++.+++.+||.+.+|..+
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~r~p--- 136 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLDRPP--- 136 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhccCCc---
Confidence 8899999999987665431 112446889999999999877544
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
..|||||||||+||.+|+.+|++++|||||||||+..+.++++.++++... ++.++|.++|+...+.+++|++++|+
T Consensus 137 --~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 137 --FNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred --cccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 569999999999999999999999999999999999999999999999864 45667779999999999999999999
Q ss_pred CCeEEEEcChhhHHH
Q 000562 383 EGQIVYQGPRVSVLD 397 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1419)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877643
No 102
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.1e-36 Score=361.07 Aligned_cols=218 Identities=27% Similarity=0.373 Sum_probs=184.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1419)
.++|+|+|+.+++||+++|+|||||||||||++|+|.++++ +|+|.++|.++....+ +|.++||+|++.++|++||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999876 9999999998865543 4779999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1419)
+|||.|+.+.++... .+.+.+++++++.+||++..|..+ ..
T Consensus 104 ~eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~p-----~~ 144 (375)
T PRK09452 104 FENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQRKP-----HQ 144 (375)
T ss_pred HHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 999999764322110 011234678899999998777655 46
Q ss_pred CChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000562 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1419)
Q Consensus 307 LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 386 (1419)
|||||||||+|||||+.+|++|+||||+++||..++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987754 45667799999999999999999999999
Q ss_pred EEEcChhhHHHHHHhCCCCCCCCCChHHHH
Q 000562 387 VYQGPRVSVLDFFASMGFSCPKRKNVADFL 416 (1419)
Q Consensus 387 v~~G~~~~~~~~F~~~G~~~p~~~~~adfl 416 (1419)
+..|+++++. ..|...-+++|+
T Consensus 224 ~~~g~~~~i~--------~~p~~~~~a~~~ 245 (375)
T PRK09452 224 EQDGTPREIY--------EEPKNLFVARFI 245 (375)
T ss_pred EEEcCHHHHH--------hCcccHHHHHhc
Confidence 9999998873 345544455554
No 103
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=8.6e-37 Score=360.38 Aligned_cols=206 Identities=27% Similarity=0.396 Sum_probs=178.2
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-ccccceEEEEccCCCCCCCcc
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
+.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++.++|++|
T Consensus 13 ~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~t 90 (353)
T PRK10851 13 GRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMT 90 (353)
T ss_pred CCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHCCEEEEecCcccCCCCc
Confidence 34579999999999999999999999999999999999876 468999999987643 223467999999999999999
Q ss_pred HHHHHHHHhhhcCC-CCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 919 VLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 919 v~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
|+||+.|....+.. .....++.+++++++++.++|.+..+..+ ..|||||||||+|||||+.+|++|+|||||+
T Consensus 91 v~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~QRvalArAL~~~P~llLLDEP~s 165 (353)
T PRK10851 91 VFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQKQRVALARALAVEPQILLLDEPFG 165 (353)
T ss_pred HHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99999997654211 12234455667899999999988877654 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |++++.|+.
T Consensus 166 ~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~~ 221 (353)
T PRK10851 166 ALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGTP 221 (353)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 99999999999999999866 899999999986 67889999999985 799999985
No 104
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.3e-36 Score=357.95 Aligned_cols=204 Identities=24% Similarity=0.316 Sum_probs=178.5
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc---cc----cceEEEEccCCC
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---TF----ARISGYCEQNDI 912 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~Q~d~ 912 (1419)
+++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... .+ ++.+|||+|++.
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 45679999999999999999999999999999999999876 5689999999886531 22 568999999999
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
++|++||+||+.|..... ....++..+++.++++.++|.+..+... ..|||||||||+|||||+.+|+||+|
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999986543 2334556677899999999988777654 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
||||++||+.++..+++.++++.++ |+|||++||+++ ++...+|++++|++ |+++..|+..
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~~ 215 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTPD 215 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCHH
Confidence 9999999999999999999999754 899999999976 57788999999985 7999999753
No 105
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-36 Score=337.50 Aligned_cols=200 Identities=28% Similarity=0.427 Sum_probs=172.2
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHH
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 921 (1419)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... .++.++|++|++.+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 579999999999999999999999999999999999865 468999999987642 3567999999998888899999
Q ss_pred HHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCH
Q 000562 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1419)
Q Consensus 922 ~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~ 1001 (1419)
++.+....+. .......+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++++|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9988754432 222334566889999999987766653 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEec-CCEEEEeCCC
Q 000562 1002 RAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKR-GGELIYAGPL 1054 (1419)
Q Consensus 1002 ~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~-gG~~~~~G~~ 1054 (1419)
.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ .|+++..++.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999865 4899999999986 46778999999985 4899988775
No 106
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.4e-36 Score=308.62 Aligned_cols=199 Identities=26% Similarity=0.380 Sum_probs=176.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1419)
..+|+|||+.|++||++-|+||||||||||||+|.+...|+ .|+|.+||+++.... .+|.+|+|+||..++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 46999999999999999999999999999999999988776 999999999987653 258999999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
++.||.||++|+.+..|... .+.+.++.++|+..||.+.++..
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~l--- 134 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARAL--- 134 (223)
T ss_pred ccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhcC---
Confidence 99999999999887765321 12345688899999999987754
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
+..|||||||||+||||++.+|++|+-||||-.||+..+.+|++.+.++.+. +|||++.+|+..-+..+--+++.|
T Consensus 135 --P~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~--GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 135 --PSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRL--GTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred --ccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhc--CcEEEEEeccHHHHHhccCcEEEE
Confidence 4469999999999999999999999999999999999999999999998753 788888999999998898999999
Q ss_pred cCCeEEEEc
Q 000562 382 SEGQIVYQG 390 (1419)
Q Consensus 382 ~~G~iv~~G 390 (1419)
++|+++...
T Consensus 211 ~~Grl~~d~ 219 (223)
T COG2884 211 EDGRLVRDE 219 (223)
T ss_pred eCCEEEecc
Confidence 999998754
No 107
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.5e-36 Score=353.95 Aligned_cols=203 Identities=27% Similarity=0.369 Sum_probs=174.7
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCc
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~l 917 (1419)
++..+|+|||+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++.+++.+
T Consensus 15 ~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (303)
T TIGR01288 15 GDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEF 92 (303)
T ss_pred CCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcccHHHHhhcEEEEeccccCCcCC
Confidence 34579999999999999999999999999999999999865 458999999987532 23456799999999988999
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
||+|++.+.+..+. ....+..+.++++++.+++.+..++.+ +.||||||||++||++|+.+|++|+|||||+
T Consensus 93 tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 164 (303)
T TIGR01288 93 TVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGMKRRLTLARALINDPQLLILDEPTT 164 (303)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99999987554331 222333456788999999988777664 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 165 gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 219 (303)
T TIGR01288 165 GLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGRP 219 (303)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 99999999999999999878999999999986 57788999999985 799999985
No 108
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.4e-36 Score=360.12 Aligned_cols=202 Identities=24% Similarity=0.345 Sum_probs=177.7
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-ccccceEEEEccCCCCCCCccH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
...+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...+|.+|||+|++.++|++||
T Consensus 26 ~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 26 GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 3568999999999999999999999999999999999876 468999999987643 2235779999999999999999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+||+.|+...+. .+..+.++.++++++.++|.+..+..+ ..|||||||||+|||+|+.+|++|+|||||+||
T Consensus 104 ~eNi~~~l~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~QRVaLARaL~~~P~llLLDEP~s~L 175 (375)
T PRK09452 104 FENVAFGLRMQK---TPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQQRVAIARAVVNKPKVLLLDESLSAL 175 (375)
T ss_pred HHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcC
Confidence 999999865432 233445567899999999998887764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|..++..+.+.|+++.++ |.|+|++||++. ++...+|++++|++ |+++..|+.
T Consensus 176 D~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~~ 229 (375)
T PRK09452 176 DYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGTP 229 (375)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999865 899999999986 68889999999985 899999985
No 109
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-36 Score=335.66 Aligned_cols=199 Identities=24% Similarity=0.443 Sum_probs=170.8
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVL 920 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~ 920 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..++.++|++|++.+++.+|++
T Consensus 12 ~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 12 RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 3569999999999999999999999999999999999865 468999999987643 3456799999999888899999
Q ss_pred HHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 000562 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1419)
Q Consensus 921 E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD 1000 (1419)
|++.+....+. ....+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++++|||||+|||
T Consensus 89 e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD 160 (210)
T cd03269 89 DQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKVQFIAAVIHDPELLILDEPFSGLD 160 (210)
T ss_pred HHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCC
Confidence 99988655432 222334456789999999987766543 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|.+ |++++.|
T Consensus 161 ~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 161 PVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 99999999999999877899999999976 46678999999985 7887654
No 110
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-37 Score=325.98 Aligned_cols=199 Identities=27% Similarity=0.375 Sum_probs=168.7
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc----cccceEEEEccCCC--CCCC
Q 000562 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDI--HSPG 916 (1419)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d~--~~~~ 916 (1419)
.+|+|||+++.+||++||+|+||||||||.++|+|... +.+|+|.++|.+.... .+.+.+.+|+||+. +.|.
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~ 98 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPR 98 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCcccCccccchhhccceeEEecCCccccCcc
Confidence 59999999999999999999999999999999999877 4689999999875432 46788999999975 5689
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccc-cCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
.||++.|.-.... ...++.+ +++.++++.+||.+- .+.. +.+||||||||++|||||+.+|++|++|||
T Consensus 99 ~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~-----P~eLSGGQ~QRiaIARAL~~~PklLIlDEp 168 (252)
T COG1124 99 RTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRR-----PHELSGGQRQRIAIARALIPEPKLLILDEP 168 (252)
T ss_pred hhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcC-----chhcChhHHHHHHHHHHhccCCCEEEecCc
Confidence 9999988654432 1222222 338999999999653 3332 467999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
||.||+..+++|++.+.++.++ +.|.|+++||.+. +...|||++||++ |+++..+|.+
T Consensus 169 tSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdRi~Vm~~-G~ivE~~~~~ 227 (252)
T COG1124 169 TSALDVSVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDRIAVMDN-GQIVEIGPTE 227 (252)
T ss_pred hhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhheeeeeC-CeEEEeechh
Confidence 9999999999999999999754 7899999999874 7778999999986 7999999964
No 111
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.1e-37 Score=336.56 Aligned_cols=201 Identities=26% Similarity=0.376 Sum_probs=178.6
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCC----cccccceEEEEccCCCC-CCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR----QETFARISGYCEQNDIH-SPG 916 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~----~~~~~~~~gyv~Q~d~~-~~~ 916 (1419)
..+|+|+|+++++||.++|+|+||||||||+++|+|... +.+|.|.++|.+.. ...+++.+|||+|++.. +..
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~ 94 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFG 94 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeeccchhhHHHhhcceEEEEECccccccc
Confidence 579999999999999999999999999999999999877 45799999999855 34678899999999755 456
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
-||.|.+.|+..-. ..+.++.+++++++++.+++.++++.. +..|||||||||+||.+|+.+|++|+|||||
T Consensus 95 ~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSGGqkqRvaIA~vLa~~P~iliLDEPt 166 (235)
T COG1122 95 PTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRP-----PFNLSGGQKQRVAIAGVLAMGPEILLLDEPT 166 (235)
T ss_pred CcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCCcceeeHHhhHHHHcCCCEEEEcCCC
Confidence 79999999986433 345556788999999999999998765 4589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+.+...+++.++++.++ |.|||+++||.+ .+.+.+|++++|++ |+++++|++
T Consensus 167 a~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~~g~p 223 (235)
T COG1122 167 AGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILADGDP 223 (235)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEeecCCH
Confidence 999999999999999999877 689999999986 57788999999996 799999985
No 112
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4.9e-37 Score=308.77 Aligned_cols=196 Identities=28% Similarity=0.366 Sum_probs=172.1
Q ss_pred ceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-ccccceEEEEccCCCCCCCccHHHHHHH
Q 000562 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTVLESLLF 925 (1419)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f 925 (1419)
..+.+|.+||++||+||||||||||||+|+|... +.+|+|.|||.+... ....|-++.++|+..+|.++||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 4567899999999999999999999999999877 568999999998654 3456778999999999999999999987
Q ss_pred HhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHH
Q 000562 926 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 1005 (1419)
Q Consensus 926 ~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~ 1005 (1419)
+.. |.-.-..+.++.++.++..+||.++.+.+. ..||||||||+++||+|+++-+|++||||.|.|||.-+.
T Consensus 95 Gl~---P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLS---PGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCC---cccccCHHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 642 211112445677899999999999988874 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1006 IVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1006 ~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
++...+.++++ ++.|++++||+|+ +....+|+++++++ |++.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 99999999975 4899999999997 78899999999986 899999985
No 113
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-36 Score=337.44 Aligned_cols=202 Identities=28% Similarity=0.372 Sum_probs=173.3
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCcc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
++.+|+|+|+++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 12 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 12 DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 4579999999999999999999999999999999999865 468999999986532 234567999999998889999
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsg 998 (1419)
|+|++.+....+. ...++.++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++++|||||+|
T Consensus 90 v~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~la~al~~~p~llllDEPt~~ 161 (220)
T cd03265 90 GWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRRRLEIARSLVHRPEVLFLDEPTIG 161 (220)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccC
Confidence 9999998754432 222334456889999999987776654 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 162 LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 162 LDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 9999999999999999876 899999999986 57778999999985 799888864
No 114
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.5e-36 Score=337.55 Aligned_cols=194 Identities=25% Similarity=0.326 Sum_probs=166.5
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---c---cccceEEEEccCCCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---E---TFARISGYCEQNDIHSP 915 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~---~~~~~~gyv~Q~d~~~~ 915 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... . .+++.++|++|++.+++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 469999999999999999999999999999999999866 468999999987532 1 24567999999999889
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
.+||+|++.+....+. ....+.++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+||||
T Consensus 94 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP 165 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLSGGEQQRVAIARAIVHKPPLLLADEP 165 (216)
T ss_pred cccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999998754432 222334556889999999987776654 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCE
Q 000562 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~ 1047 (1419)
|+|||+.++..+.+.|++++++|+|||+++|+++ .+...+|++++|.+ |+
T Consensus 166 t~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 166 TGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred CCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999877999999999986 46678999999986 54
No 115
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.8e-36 Score=340.10 Aligned_cols=205 Identities=29% Similarity=0.391 Sum_probs=173.0
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc---c-ccceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~d~~~~~ 916 (1419)
++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.+++.
T Consensus 12 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 12 GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 3569999999999999999999999999999999999865 4689999999876431 1 23468999999999999
Q ss_pred ccHHHHHHHHhhhcCCCC-------CcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCc
Q 000562 917 LTVLESLLFSAWLRLPSE-------IELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~-------~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~i 989 (1419)
+||+|++.+....+.... ....+..+.++++++.+++.+..+..+ +.||||||||++||++|+.+|++
T Consensus 90 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~l 164 (236)
T cd03219 90 LTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA-----GELSYGQQRRLEIARALATDPKL 164 (236)
T ss_pred CCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999988754332110 012334456889999999987766543 57999999999999999999999
Q ss_pred ceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
++|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 165 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (236)
T cd03219 165 LLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-GRVIAEGTP 227 (236)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEeecCH
Confidence 9999999999999999999999999878999999999986 56678999999985 799988874
No 116
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=358.69 Aligned_cols=203 Identities=25% Similarity=0.359 Sum_probs=178.1
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-ccccceEEEEccCCCCCCCccH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
+..+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...+|.+|||+|++.++|++||
T Consensus 31 ~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 31 GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 3569999999999999999999999999999999999876 568999999987643 2346789999999999999999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+||+.|+...+. ....+.+++++++++.++|.+..+... .+|||||||||+|||+|+.+|++|+|||||+||
T Consensus 109 ~eNi~~~l~~~~---~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~L 180 (377)
T PRK11607 109 EQNIAFGLKQDK---LPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQRQRVALARSLAKRPKLLLLDEPMGAL 180 (377)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999999865432 234455667899999999998877654 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 1000 DARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|..++..+.+.|+++.+ .|.|+|++|||++ ++...+|++++|++ |+++..|++.
T Consensus 181 D~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~~~ 235 (377)
T PRK11607 181 DKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGEPE 235 (377)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcCHH
Confidence 99999999999999865 4899999999986 67889999999985 7999999853
No 117
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.4e-36 Score=352.46 Aligned_cols=229 Identities=25% Similarity=0.381 Sum_probs=187.1
Q ss_pred cCCCCCCcEEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcceeeeecceEeEeCCeEEEEEcCCCC
Q 000562 93 VDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSS 172 (1419)
Q Consensus 93 ~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 172 (1419)
..+..|.=.|+|+|++.+- . ++++||+++||+|++||.+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y-------------------------------~--~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSY-------------------------------G--PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEe-------------------------------C--CCCceecceeEEecCCCEEEEECCCCC
Confidence 4566677789999988662 1 223599999999999999999999999
Q ss_pred cHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHH
Q 000562 173 GKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITEL 249 (1419)
Q Consensus 173 GKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 249 (1419)
||||+|++|.++++ + +|+|.+||.++++... |+.+|||||+..+|. .||.+||.++.. ...++.+.++
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn~----sas~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGNP----SASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCCC----CcCHHHHHHH
Confidence 99999999999987 4 8999999999987654 578999999987665 599999998743 2334555555
Q ss_pred HHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCChHHhHHHHHHHHHhCCCcEeE
Q 000562 250 ARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLF 329 (1419)
Q Consensus 250 ~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~ill 329 (1419)
|++... .|. ...|++.++|.||+++. -|||||||||++|||++.+|+|++
T Consensus 461 ~k~a~~--------------------------hd~---i~~l~~GY~T~VGerG~-~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRAGL--------------------------HDV---ISRLPDGYQTLVGERGL-MLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHcCc--------------------------HHH---HHhccccchhhHhhccc-ccccchHHHHHHHHHHhcCCCeEE
Confidence 554221 111 34588999999998765 599999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChhhHHH
Q 000562 330 MDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLD 397 (1419)
Q Consensus 330 lDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~ 397 (1419)
+|||||+||+.|..++++.+.... ++.|+|.+.|... +...||+|++|++|++...|+.+|++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~~---~~rTvI~IvH~l~-ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDVM---SGRTVIMIVHRLD-LLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHhc---CCCeEEEEEecch-hHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 999999999999999999999732 3444555666654 557899999999999999999999975
No 118
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.9e-36 Score=334.58 Aligned_cols=200 Identities=27% Similarity=0.391 Sum_probs=170.5
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc-cccceEEEEccCCCCCCCccH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.+|+
T Consensus 12 ~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 12 NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 3569999999999999999999999999999999999865 4689999999875431 224579999999988889999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+|++.+....+. ...++.++.++++++.+++.+..+..+ +.||||||||++||++|+.+|++++|||||+||
T Consensus 90 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~laral~~~p~llllDEPt~~L 161 (213)
T cd03301 90 YDNIAFGLKLRK---VPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQRVALGRAIVREPKVFLMDEPLSNL 161 (213)
T ss_pred HHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999988654331 223344556788999999987776654 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
|+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|.+ |++++.|
T Consensus 162 D~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 162 DAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 999999999999999864 899999999976 56778999999985 7888765
No 119
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=355.14 Aligned_cols=210 Identities=27% Similarity=0.382 Sum_probs=178.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1419)
+++|+|+|+++++||+++|+|||||||||||++|+|.++++ +|+|.++|+++....+ ++.++||+|++.+++++||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 35999999999999999999999999999999999998876 9999999998865443 3679999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1419)
+||+.|+.+......... . .+...+++++++.+||++..|+.+ ..
T Consensus 92 ~eni~~~~~~~~~~~~~~------~------------------------~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRERPN------A------------------------AAIKAKVTQLLEMVQLAHLADRYP-----AQ 136 (353)
T ss_pred HHHHHhhhhhcccccCCC------H------------------------HHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 999998754311000000 0 011235678999999988777655 46
Q ss_pred CChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000562 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1419)
Q Consensus 307 LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 386 (1419)
|||||||||+|||||+.+|++++|||||+|||+.++.++.+.|+++.+.. +.+++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tii~vTHd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEEL-KFTSVFVTHDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987643 45677799999999999999999999999
Q ss_pred EEEcChhhHH
Q 000562 387 VYQGPRVSVL 396 (1419)
Q Consensus 387 v~~G~~~~~~ 396 (1419)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 120
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.8e-36 Score=351.02 Aligned_cols=202 Identities=26% Similarity=0.381 Sum_probs=176.5
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCc
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~l 917 (1419)
+++.+|+|+|+++++||++||+|||||||||||++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+
T Consensus 13 ~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~ 90 (301)
T TIGR03522 13 GTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDM 90 (301)
T ss_pred CCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccChHHHHhceEEecCCCCCCCCC
Confidence 34679999999999999999999999999999999999866 568999999987643 23456799999999999999
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
||.|++.+.+.++. ...++..+.++++++.+||.+..+..+ +.||||||||++||++|+.+|++|+|||||+
T Consensus 91 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lliLDEPt~ 162 (301)
T TIGR03522 91 YVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYRQRVGLAQALIHDPKVLILDEPTT 162 (301)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999998776542 222334456889999999998887764 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 163 gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 163 GLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred cCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999864 799999999986 57788999999985 899999986
No 121
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-36 Score=358.96 Aligned_cols=202 Identities=27% Similarity=0.397 Sum_probs=176.2
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-ccccceEEEEccCCCCCCCccH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.+||++|+..+++.+||
T Consensus 15 ~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 15 DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 4579999999999999999999999999999999999876 468999999987643 1234679999999999999999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+||+.|....+. ....+.+++++++++.++|.+..+..+ ..|||||||||+|||+|+.+|++|+|||||+||
T Consensus 93 ~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~L 164 (369)
T PRK11000 93 AENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNL 164 (369)
T ss_pred HHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999998765432 233445567899999999988777654 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+.++..+.+.|+++.++ |.|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 165 D~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~~ 218 (369)
T PRK11000 165 DAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGKP 218 (369)
T ss_pred CHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999765 899999999986 57788999999985 799999985
No 122
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.2e-36 Score=338.75 Aligned_cols=203 Identities=24% Similarity=0.346 Sum_probs=173.3
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc---c-ccceEEEEccCCCCCC
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSP 915 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~d~~~~ 915 (1419)
+++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.+++
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (232)
T cd03218 11 GKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFR 88 (232)
T ss_pred CCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccCCHhHHHhccEEEecCCccccc
Confidence 34579999999999999999999999999999999999866 4689999999875321 1 2346899999999999
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
.+|++|++.+....+. ....+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+||||
T Consensus 89 ~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP 160 (232)
T cd03218 89 KLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGERRRVEIARALATNPKFLLLDEP 160 (232)
T ss_pred cCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 9999999988643332 222334456788999999987766653 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 161 t~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 217 (232)
T cd03218 161 FAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGTP 217 (232)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeCH
Confidence 9999999999999999999877999999999986 57888999999985 799988875
No 123
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.8e-36 Score=337.94 Aligned_cols=203 Identities=26% Similarity=0.318 Sum_probs=170.6
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCC-----CCceEEEEEEECCccCCc-----ccccceEEEEccC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK-----TGGIIEGDIYISGYPKRQ-----ETFARISGYCEQN 910 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~-----~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~ 910 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|.. + +.+|+|.++|.+... ..+++.++|++|+
T Consensus 12 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 12 DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 456999999999999999999999999999999999986 4 568999999987532 2345679999999
Q ss_pred CCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 000562 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1419)
Q Consensus 911 d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~il 990 (1419)
+.++ .+||+||+.+....+.. ....+.++.++++++.+++.+..+.... +..||||||||++||++|+.+|++|
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~ll 163 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGI--KLKEELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQQRLCLARALANEPEVL 163 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 8877 79999999887544321 1112234567889999999876554320 3579999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|||||+|||+.++..+.+.|++++++ +|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 164 llDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 224 (227)
T cd03260 164 LLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GRLVEFGPT 224 (227)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEecCc
Confidence 999999999999999999999999876 99999999986 46678999999985 799999875
No 124
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-36 Score=339.10 Aligned_cols=205 Identities=28% Similarity=0.385 Sum_probs=172.3
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc-cccceEEEEccCCCCCCCccH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.+||
T Consensus 14 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 14 DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 3569999999999999999999999999999999999865 4689999999875432 224569999999988889999
Q ss_pred HHHHHHHhhhcCC-CCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 000562 920 LESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1419)
Q Consensus 920 ~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsg 998 (1419)
+|++.+....+.. ......+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|
T Consensus 92 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP~~~ 166 (239)
T cd03296 92 FDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQRQRVALARALAVEPKVLLLDEPFGA 166 (239)
T ss_pred HHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999886543211 00122233456788999999987766653 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 167 LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 221 (239)
T cd03296 167 LDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGTP 221 (239)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecCH
Confidence 9999999999999999865 899999999986 46778999999985 799998875
No 125
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.9e-36 Score=335.73 Aligned_cols=198 Identities=28% Similarity=0.428 Sum_probs=170.8
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCccHH
Q 000562 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTVL 920 (1419)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv~ 920 (1419)
.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+||+
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 96 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTAR 96 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHH
Confidence 69999999999999999999999999999999999866 468999999987643 23456799999999888999999
Q ss_pred HHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 000562 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1419)
Q Consensus 921 E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD 1000 (1419)
|++.+....+. ....+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 97 e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD 168 (218)
T cd03266 97 ENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLD 168 (218)
T ss_pred HHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCC
Confidence 99987654432 223344567889999999987776653 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 169 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 169 VMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 99999999999999877999999999986 56778999999986 7887654
No 126
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-36 Score=356.55 Aligned_cols=206 Identities=22% Similarity=0.312 Sum_probs=178.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1419)
..+|+|+|+.+++||+++|+|||||||||||++|+|..+++ +|+|.++|+++....+ +|.++||+|++.+|+++||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35899999999999999999999999999999999999876 9999999998865443 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1419)
.||+.|+.+..+... .+...+++++++.+||.+..|..+ .+
T Consensus 109 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~l~L~~~~~~~~-----~~ 149 (377)
T PRK11607 109 EQNIAFGLKQDKLPK----------------------------------AEIASRVNEMLGLVHMQEFAKRKP-----HQ 149 (377)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999999765322100 011234678899999987766554 46
Q ss_pred CChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000562 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1419)
Q Consensus 307 LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 386 (1419)
|||||||||+|||||+.+|++|+||||+++||..++.++.+.|+++.+.. +.+++.++|+..++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999887654 46667789999999999999999999999
Q ss_pred EEEcChhhHH
Q 000562 387 VYQGPRVSVL 396 (1419)
Q Consensus 387 v~~G~~~~~~ 396 (1419)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 127
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=320.81 Aligned_cols=210 Identities=27% Similarity=0.375 Sum_probs=176.4
Q ss_pred ccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc----ccccceEEEEc
Q 000562 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCE 908 (1419)
Q Consensus 833 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~ 908 (1419)
++....++..++|++||+++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.++.. +..++-++|||
T Consensus 7 ~~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit~~p~~~r~r~Gi~~VP 84 (237)
T COG0410 7 ENLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDITGLPPHERARLGIAYVP 84 (237)
T ss_pred EeEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecCCCCHHHHHhCCeEeCc
Confidence 344445677899999999999999999999999999999999999876 458999999998754 33456799999
Q ss_pred cCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcC-CccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000562 909 QNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVE-LTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1419)
Q Consensus 909 Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~-l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p 987 (1419)
|....||.|||+|||..++..+... +......+++.+.+- |.+.++...| .|||||||-|+|||||+++|
T Consensus 85 egR~iF~~LTVeENL~~g~~~~~~~----~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSGGEQQMLAiaRALm~~P 155 (237)
T COG0410 85 EGRRIFPRLTVEENLLLGAYARRDK----EAQERDLEEVYELFPRLKERRNQRAG-----TLSGGEQQMLAIARALMSRP 155 (237)
T ss_pred ccccchhhCcHHHHHhhhhhccccc----ccccccHHHHHHHChhHHHHhcCccc-----CCChHHHHHHHHHHHHhcCC
Confidence 9999999999999999887654321 111222677777764 5556666544 69999999999999999999
Q ss_pred CcceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 988 ~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
++|+|||||.||-|.-..+|.++|+++.++ |.||+.+-+... ...+.+||.++|.+ |++++.|+..
T Consensus 156 klLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~~G~~~ 222 (237)
T COG0410 156 KLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVLSGTAA 222 (237)
T ss_pred CEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEEecCHH
Confidence 999999999999999999999999999866 779999998866 47789999999985 8999999864
No 128
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-36 Score=336.96 Aligned_cols=206 Identities=25% Similarity=0.354 Sum_probs=173.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1419)
.++|+|+|+++++||+++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 36999999999999999999999999999999999998775 999999998876532 245799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+.+||+||+.++........ . .+....++.+++.+||++..++.++
T Consensus 90 ~~~tv~~~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 135 (235)
T cd03261 90 DSLTVFENVAFPLREHTRLS---------E------------------------EEIREIVLEKLEAVGLRGAEDLYPA- 135 (235)
T ss_pred CCCcHHHHHHHHHhhccCCC---------H------------------------HHHHHHHHHHHHHcCCchhhcCChh-
Confidence 99999999988643210000 0 0012245678899999877666554
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|+|++|
T Consensus 136 ----~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~vsH~~~~~~~~~d~v~~l 210 (235)
T cd03261 136 ----ELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKEL-GLTSIMVTHDLDTAFAIADRIAVL 210 (235)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhcCEEEEE
Confidence 599999999999999999999999999999999999999999999987532 456677889999999999999999
Q ss_pred cCCeEEEEcChhhH
Q 000562 382 SEGQIVYQGPRVSV 395 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1419)
++|++++.|+++++
T Consensus 211 ~~G~i~~~g~~~~~ 224 (235)
T cd03261 211 YDGKIVAEGTPEEL 224 (235)
T ss_pred ECCeEEEecCHHHH
Confidence 99999999988765
No 129
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-36 Score=354.84 Aligned_cols=201 Identities=26% Similarity=0.334 Sum_probs=174.4
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc------cccceEEEEccCCCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHSP 915 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~d~~~~ 915 (1419)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|++.+++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~~ 95 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLLS 95 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccCC
Confidence 579999999999999999999999999999999999876 4689999999876431 23567999999999999
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
.+||+||+.+....+. ....+.++.++++++.++|.+..+..+ +.||||||||++|||+|+.+|++|+||||
T Consensus 96 ~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~qRv~lAraL~~~p~iLlLDEP 167 (343)
T PRK11153 96 SRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRYP-----AQLSGGQKQRVAIARALASNPKVLLCDEA 167 (343)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999998765432 233344567889999999988777653 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 168 ts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~~~g~~ 225 (343)
T PRK11153 168 TSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLVEQGTV 225 (343)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 9999999999999999999765 899999999986 56778999999985 799999875
No 130
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-36 Score=351.70 Aligned_cols=206 Identities=24% Similarity=0.369 Sum_probs=176.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC------CceEEEEccCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 221 (1419)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 46999999999999999999999999999999999999876 9999999998865432 35799999999989
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+.+||+||+.+.....+... . +....++.+++.+||++..++.++
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~gL~~~~~~~~~- 139 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------A------------------------EIKARVTELLELVGLSDKADRYPA- 139 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCCchhhhCChh-
Confidence 99999999998654322100 0 012246778999999887776554
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.++||+|++|
T Consensus 140 ----~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 140 ----QLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINREL-GLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ----hCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 699999999999999999999999999999999999999999999987543 466777899999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999988774
No 131
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.8e-36 Score=359.19 Aligned_cols=207 Identities=28% Similarity=0.379 Sum_probs=176.9
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCC
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~ 916 (1419)
+++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ..+++.+||++|++.+++.
T Consensus 14 ~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~ 91 (402)
T PRK09536 14 GDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDVEALSARAASRRVASVPQDTSLSFE 91 (402)
T ss_pred CCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCC
Confidence 45679999999999999999999999999999999999876 468999999987643 3456789999999998899
Q ss_pred ccHHHHHHHHhhhcCCC-CCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 917 LTVLESLLFSAWLRLPS-EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
+||+|++.++....... .......++.++++++.+++.+..++.+ +.||||||||+.|||+|+++|+||+||||
T Consensus 92 ~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSgGerQRv~IArAL~~~P~iLLLDEP 166 (402)
T PRK09536 92 FDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSGGERQRVLLARALAQATPVLLLDEP 166 (402)
T ss_pred CCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 99999998864221100 0011234567899999999998887754 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+..
T Consensus 167 tsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~G~~~ 224 (402)
T PRK09536 167 TASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAAGPPA 224 (402)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 9999999999999999999877999999999986 57788999999985 7999999864
No 132
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.3e-36 Score=333.08 Aligned_cols=192 Identities=28% Similarity=0.387 Sum_probs=163.5
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCC-CCCCccHH
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI-HSPGLTVL 920 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~-~~~~lTv~ 920 (1419)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+......++.+||++|++. .+..+|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 569999999999999999999999999999999999876 468999999987644445567999999974 34467999
Q ss_pred HHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 000562 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1419)
Q Consensus 921 E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD 1000 (1419)
||+.+....+. ...+.++++++.+++.+..+..+ ..||||||||++|||+|+.+|++++|||||+|||
T Consensus 91 e~l~~~~~~~~-------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKELD-------AGNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhcC-------ccHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 99987543221 11245788999999988777654 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEE
Q 000562 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI 1049 (1419)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~ 1049 (1419)
+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999877999999999986 46678999999986 6653
No 133
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.2e-36 Score=332.85 Aligned_cols=196 Identities=28% Similarity=0.416 Sum_probs=168.6
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-ccccceEEEEccCCCCCCCccH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 12 ~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 12 KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 4579999999999999999999999999999999999866 468999999987543 2345679999999988889999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+|++.+....+. . .++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++++|||||+||
T Consensus 90 ~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 157 (208)
T cd03268 90 RENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQRLGIALALLGNPDLLILDEPTNGL 157 (208)
T ss_pred HHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccC
Confidence 999988654321 1 1345788999999987776653 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
|+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 158 D~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 158 DPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999877999999999976 46678999999985 7888765
No 134
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.2e-36 Score=349.95 Aligned_cols=206 Identities=27% Similarity=0.387 Sum_probs=177.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1419)
+++|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999876 999999998875421 2457999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+||+.+.++..+... .+....++++++.+||++..++.++
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVG----- 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchh-----
Confidence 9999998655432110 0012246788999999988877665
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~--g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEE--GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC--CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 59999999999999999999999999999999999999999999998753 5667778999999999999999999999
Q ss_pred EEEEcChhhHHH
Q 000562 386 IVYQGPRVSVLD 397 (1419)
Q Consensus 386 iv~~G~~~~~~~ 397 (1419)
+++.|+.+++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999988754
No 135
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-36 Score=311.60 Aligned_cols=207 Identities=26% Similarity=0.401 Sum_probs=175.7
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCC
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~ 916 (1419)
.++.+|++||++++|||++||+|||||||||||++|+|... +.+|++.+||.+.+. ...++.-+..||+..+...
T Consensus 12 ~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFp 89 (259)
T COG4559 12 AGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFP 89 (259)
T ss_pred ecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChhhCCHHHHHHHhhhcccCcccccc
Confidence 35789999999999999999999999999999999999876 458999999998654 3456677999999888778
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhh------CCCcc
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA------NPSIV 990 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~------~p~il 990 (1419)
.||+|-+.++..-... .....+..+.++++|...++.+++.... ..|||||||||.+||.|+. ++++|
T Consensus 90 Ftv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGEqQRVqlARvLaQl~~~v~~~r~L 163 (259)
T COG4559 90 FTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGEQQRVQLARVLAQLWPPVPSGRWL 163 (259)
T ss_pred eEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccch-----hhcCchHHHHHHHHHHHHHccCCCCCCceE
Confidence 8999999987532211 1122244556889999999999887654 4799999999999999976 34689
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
|||||||.||...+..++++.|+++++|..|+++.||.+. ...++|+|++|++ |+++..|++.+
T Consensus 164 ~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Grv~a~g~p~~ 227 (259)
T COG4559 164 FLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GRVIASGSPQD 227 (259)
T ss_pred EecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-CeEeecCCHHH
Confidence 9999999999999999999999999999999999999985 6688999999985 89999998753
No 136
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-36 Score=355.17 Aligned_cols=206 Identities=25% Similarity=0.379 Sum_probs=177.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1419)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.+++++||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 35999999999999999999999999999999999999876 9999999998865433 4679999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1419)
+||+.|+.+..+... . +...+++++++.+||++..|+.++ .
T Consensus 93 ~eni~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~lgL~~~~~~~~~-----~ 133 (369)
T PRK11000 93 AENMSFGLKLAGAKK----------E------------------------EINQRVNQVAEVLQLAHLLDRKPK-----A 133 (369)
T ss_pred HHHHHhHHhhcCCCH----------H------------------------HHHHHHHHHHHHcCChhhhcCChh-----h
Confidence 999998754322100 0 012246788999999887776654 6
Q ss_pred CChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000562 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1419)
Q Consensus 307 LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 386 (1419)
|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987643 45667789999999999999999999999
Q ss_pred EEEcChhhHH
Q 000562 387 VYQGPRVSVL 396 (1419)
Q Consensus 387 v~~G~~~~~~ 396 (1419)
+..|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 137
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.1e-34 Score=364.23 Aligned_cols=214 Identities=28% Similarity=0.441 Sum_probs=176.0
Q ss_pred ccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECC
Q 000562 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG 892 (1419)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g 892 (1419)
-+-.++++|++|..+. +...+|+|+|++|+|||.+||+|+||||||||+|+|+|... +..|+|.+||
T Consensus 468 ~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~dg 534 (709)
T COG2274 468 LQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILLDG 534 (709)
T ss_pred cCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECC
Confidence 3457888999887742 23479999999999999999999999999999999999877 5699999999
Q ss_pred ccCC---cccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCC-------ccccCCccc
Q 000562 893 YPKR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVEL-------TSLSGALIG 962 (1419)
Q Consensus 893 ~~~~---~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l-------~~~~~~~~g 962 (1419)
++.. ...+|+.+|||+|++.++. -|++||+.++. | +.+.+ .+.++++..|. ..-.|+.+|
T Consensus 535 ~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~----p-~~~~e----~i~~A~~~ag~~~fI~~lP~gy~t~v~ 604 (709)
T COG2274 535 VDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN----P-EATDE----EIIEAAQLAGAHEFIENLPMGYDTPVG 604 (709)
T ss_pred EeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC----C-CCCHH----HHHHHHHHhCcHHHHHhcccccccccc
Confidence 9864 3568899999999988875 59999998752 2 22222 22333333333 223456666
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEE
Q 000562 963 LPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1419)
Q Consensus 963 ~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1042 (1419)
..| .+||||||||++|||+|+++|+||+||||||+||+.+.+.|++.|+++. +|+|+|+++|+++ .++.+|+++||
T Consensus 605 E~G-~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIiVl 680 (709)
T COG2274 605 EGG-ANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRIIVL 680 (709)
T ss_pred cCC-CCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEEEc
Confidence 544 5799999999999999999999999999999999999999999999975 5899999999976 67899999999
Q ss_pred ecCCEEEEeCCC
Q 000562 1043 KRGGELIYAGPL 1054 (1419)
Q Consensus 1043 ~~gG~~~~~G~~ 1054 (1419)
++ |+++..|+.
T Consensus 681 ~~-Gkiv~~gs~ 691 (709)
T COG2274 681 DQ-GKIVEQGSH 691 (709)
T ss_pred cC-CceeccCCH
Confidence 85 899999995
No 138
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-36 Score=316.02 Aligned_cols=205 Identities=26% Similarity=0.399 Sum_probs=172.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCC----ceEEEEccCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP----RTSAYVSQQDWQVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~~~ 223 (1419)
.++|+|||+.+++||+++|+||||+||||||++|+|..++. +|+|.++|++++...+. +-++||||....|+.
T Consensus 16 ~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~ 92 (237)
T COG0410 16 IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPR 92 (237)
T ss_pred eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhh
Confidence 57999999999999999999999999999999999998775 99999999999887653 568999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhC-CcccccccccCc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG-LDTCADTLVGDE 302 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 302 (1419)
|||+|||..++....... . ... ..|.+.+.+= |....+..-|
T Consensus 93 LTVeENL~~g~~~~~~~~-~----------------~~~------------------~~e~v~~lFP~Lker~~~~aG-- 135 (237)
T COG0410 93 LTVEENLLLGAYARRDKE-A----------------QER------------------DLEEVYELFPRLKERRNQRAG-- 135 (237)
T ss_pred CcHHHHHhhhhhcccccc-c----------------ccc------------------cHHHHHHHChhHHHHhcCccc--
Confidence 999999998754321100 0 000 0233333332 3444555555
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
+|||||+|-++|||||+++|++|+|||||.||-|.-..+|.+.++++.+. ++.+|+.+.|+...+.+++|+.++|.
T Consensus 136 ---~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~iaDr~yvle 211 (237)
T COG0410 136 ---TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALEIADRGYVLE 211 (237)
T ss_pred ---CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHHhhCEEEEEe
Confidence 59999999999999999999999999999999999999999999999865 35788889999999999999999999
Q ss_pred CCeEEEEcChhhHH
Q 000562 383 EGQIVYQGPRVSVL 396 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1419)
+|+|++.|+.+++.
T Consensus 212 ~Griv~~G~~~eL~ 225 (237)
T COG0410 212 NGRIVLSGTAAELL 225 (237)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998875
No 139
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.4e-36 Score=334.37 Aligned_cols=193 Identities=31% Similarity=0.444 Sum_probs=164.9
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc-------cccceEEEEccCCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-------TFARISGYCEQNDIHS 914 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-------~~~~~~gyv~Q~d~~~ 914 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.++
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLL 94 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccC
Confidence 579999999999999999999999999999999999876 4689999999875421 1245799999999999
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDE 994 (1419)
+.+||+|++.+....+. ......++.++++++.+++.+..+..+ +.||||||||++||++|+.+|++|+|||
T Consensus 95 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDE 166 (218)
T cd03255 95 PDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELSGGQQQRVAIARALANDPKIILADE 166 (218)
T ss_pred CCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcCHHHHHHHHHHHHHccCCCEEEEcC
Confidence 99999999998765432 122334456889999999987766553 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCE
Q 000562 995 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1419)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~ 1047 (1419)
||+|||+.++..+.+.|+++++ .|+|||+++|+++. + +.+|++++|++ |+
T Consensus 167 P~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 167 PTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADRIIELRD-GK 217 (218)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcEEEEeeC-Cc
Confidence 9999999999999999999987 58999999999863 4 48999999986 54
No 140
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-36 Score=322.52 Aligned_cols=221 Identities=23% Similarity=0.354 Sum_probs=187.8
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCC----ceEEEEccCCCCC
Q 000562 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP----RTSAYVSQQDWQV 221 (1419)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 221 (1419)
....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ .-++..+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 3467999999999999999999999999999999999999887 99999999999887764 4578899999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
++|||.||+..++..+.. +...-...+- .-+..+..++...+|+.+||.+.+|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~~l~~~~~-------------------~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSGLLGRPRA-------------------RKEEREARERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhhhhccccc-------------------hhhHHHHHHHHHHHHHHcCCchhhcchhhc
Confidence 999999999988664421 0000000000 000112345678899999999999999885
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.++++.+. ++.+|+.+-|+..-++++||||++|
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~-~g~tillIEHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDR-GGVTILLIEHDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhc-CCcEEEEEEeccHHHhhhccEEEec
Confidence 9999999999999999999999999999999999999999999999863 4678888999999999999999999
Q ss_pred cCCeEEEEcChhhHHH
Q 000562 382 SEGQIVYQGPRVSVLD 397 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~~ 397 (1419)
+.|+++.+|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999853
No 141
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-36 Score=339.03 Aligned_cols=204 Identities=28% Similarity=0.377 Sum_probs=170.6
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEEEccCCCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~~~~ 915 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 569999999999999999999999999999999999865 458999999987542 224567999999998889
Q ss_pred CccHHHHHHHHhhhcC-----CCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 000562 916 GLTVLESLLFSAWLRL-----PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~-----~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~il 990 (1419)
.+||+|++.+...... ..........+.++++++.+++.+..+.. +..||||||||++||++|+.+|+||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----ADQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999987532110 00111123345678899999998766654 3579999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 991 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD-GRIVFDGPP 229 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecCH
Confidence 999999999999999999999999764 899999999986 46678999999985 799998875
No 142
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-36 Score=335.98 Aligned_cols=200 Identities=27% Similarity=0.348 Sum_probs=172.3
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc------cccceEEEEccCCCCCCC
Q 000562 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHSPG 916 (1419)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~d~~~~~ 916 (1419)
.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSS 96 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCC
Confidence 79999999999999999999999999999999999876 4689999999875431 235679999999999999
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
+|++|++.+....+. .......+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++++|||||
T Consensus 97 ~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDEP~ 168 (233)
T cd03258 97 RTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLSGGQKQRVGIARALANNPKVLLCDEAT 168 (233)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCC
Confidence 999999988654332 223334556789999999987766643 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 225 (233)
T cd03258 169 SALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVVEEGTV 225 (233)
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999765 899999999976 46678999999985 799998874
No 143
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.8e-36 Score=341.70 Aligned_cols=209 Identities=23% Similarity=0.268 Sum_probs=176.6
Q ss_pred cccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc---c----ccceEEE
Q 000562 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T----FARISGY 906 (1419)
Q Consensus 834 ~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gy 906 (1419)
+..+.++.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|
T Consensus 29 ~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~ 106 (269)
T cd03294 29 EILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISM 106 (269)
T ss_pred hhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEE
Confidence 34445567789999999999999999999999999999999999876 4589999999875421 1 2357999
Q ss_pred EccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000562 907 CEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1419)
Q Consensus 907 v~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~ 986 (1419)
++|++.+++.+||+|++.+....+. .......+.++++++.++|.+..+..+ ..||||||||++||++|+.+
T Consensus 107 v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~ 178 (269)
T cd03294 107 VFQSFALLPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVD 178 (269)
T ss_pred EecCcccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcC
Confidence 9999998889999999988754331 122334456788999999987777654 47999999999999999999
Q ss_pred CCcceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 987 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 179 p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 179 PDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999999754 899999999976 46788999999985 799998875
No 144
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.3e-35 Score=348.58 Aligned_cols=206 Identities=28% Similarity=0.372 Sum_probs=177.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1419)
+.+|+|||++|++|++++|+||||||||||+++|+|.+.|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 35999999999999999999999999999999999999876 999999999875432 2467999999999899999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+||+.|.....+... .+....++.+++.+||++..++.++
T Consensus 131 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~~----- 171 (340)
T PRK13536 131 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADARVS----- 171 (340)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCCChh-----
Confidence 9999987544322100 0011235678889999988887775
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
+|||||||||+||+||+++|++++|||||+|||+.++.++.+.|++++. .+++|+.++|+..++.++||+|++|++|+
T Consensus 172 ~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~--~g~tilisSH~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 172 DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999865 25667778999999999999999999999
Q ss_pred EEEEcChhhHHH
Q 000562 386 IVYQGPRVSVLD 397 (1419)
Q Consensus 386 iv~~G~~~~~~~ 397 (1419)
++++|+.+++..
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999998764
No 145
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=8.3e-36 Score=332.59 Aligned_cols=200 Identities=30% Similarity=0.448 Sum_probs=171.6
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCccH
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+|+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCH
Confidence 569999999999999999999999999999999999866 468999999987542 2345679999999988889999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+|++.+....+. ....+..+.++++++.++|.+..++.+ ..||+|||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~L 164 (220)
T cd03263 93 REHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGL 164 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 999988654432 222333456789999999987766653 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |+++..|+.
T Consensus 165 D~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 165 DPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred CHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999875 699999999986 46678999999985 799988875
No 146
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.1e-35 Score=336.14 Aligned_cols=203 Identities=25% Similarity=0.378 Sum_probs=173.0
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-----ccccceEEEEccCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIHSP 915 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~~~ 915 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++
T Consensus 13 ~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 13 PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 3569999999999999999999999999999999999865 568999999987542 234567999999998888
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
.+||+|++.+...... .....+..+.+.++++.+++.+..+..+ +.||||||||++||++|+.+|++++||||
T Consensus 91 ~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP 163 (240)
T PRK09493 91 HLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSGGQQQRVAIARALAVKPKLMLFDEP 163 (240)
T ss_pred CCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999999987642111 1223344556789999999987666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 164 ~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 220 (240)
T PRK09493 164 TSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAEDGDP 220 (240)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeCCH
Confidence 9999999999999999999877999999999986 46678999999985 799999875
No 147
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.6e-35 Score=331.39 Aligned_cols=205 Identities=38% Similarity=0.712 Sum_probs=172.3
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCC-CceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHH
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT-GGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVL 920 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~-~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~ 920 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +++.+|+|.++|.+.....+++.++|++|++.+++.+||+
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 99 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTVR 99 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEEeCCCCccCcCCcHH
Confidence 579999999999999999999999999999999999764 1235899999998765445667899999999999999999
Q ss_pred HHHHHHhhhcCCCCCcHHHHHHHHHH-HHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 921 ESLLFSAWLRLPSEIELETQRAFVEE-VMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 921 E~l~f~a~lr~~~~~~~~~~~~~v~~-vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
||+.|.+....+...........+++ .++.+++.+..++. ++.||||||||++||++|+.+|++++|||||+||
T Consensus 100 enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~illlDEP~~gL 174 (226)
T cd03234 100 ETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGL 174 (226)
T ss_pred HHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCC
Confidence 99998765443222122222334455 88888888776654 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
|+.++..+.+.++++.++|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 175 D~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 175 DSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999877999999999985468889999999985 7888765
No 148
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-35 Score=339.40 Aligned_cols=218 Identities=27% Similarity=0.389 Sum_probs=177.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC-----CCceEEEEccCCC-CC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDW-QV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 221 (1419)
+++|+|||++|++||+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 36999999999999999999999999999999999999876 999999999886532 2467999999863 34
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc--ccccccc
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD--TCADTLV 299 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 299 (1419)
...||+||+.|+....+.. .++....++++++.+||+ +..|+.
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~- 141 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------------------------------EEEIENRVKRAMNIVGLDYEDYKDKS- 141 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhccCC-
Confidence 5689999998864322110 001123467889999997 445544
Q ss_pred cCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000562 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1419)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 379 (1419)
++.||||||||++||+||+.+|++|+|||||+|||+.++.++.+.|+++++. .+++|+.++|+..++..+||+|+
T Consensus 142 ----~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 142 ----PFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 4569999999999999999999999999999999999999999999998763 35677778999999999999999
Q ss_pred EEcCCeEEEEcChhhHHH---HHHhCCCCCCC
Q 000562 380 LLSEGQIVYQGPRVSVLD---FFASMGFSCPK 408 (1419)
Q Consensus 380 lL~~G~iv~~G~~~~~~~---~F~~~G~~~p~ 408 (1419)
+|++|+++++|+++++.+ .....|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988743 23344555443
No 149
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=332.36 Aligned_cols=200 Identities=28% Similarity=0.400 Sum_probs=169.6
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCccc------c-cceEEEEccCCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQET------F-ARISGYCEQNDIHS 914 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~------~-~~~~gyv~Q~d~~~ 914 (1419)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.... . ++.++|++|++.++
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~ 99 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLL 99 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccC
Confidence 469999999999999999999999999999999999865 46899999998764311 2 25699999999888
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDE 994 (1419)
+.+|++|++.+....+. ...++.+++++++++.+++.+..+..+ ..||||||||++||++|+.+|+||+|||
T Consensus 100 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDE 171 (233)
T PRK11629 100 PDFTALENVAMPLLIGK---KKPAEINSRALEMLAAVGLEHRANHRP-----SELSGGERQRVAIARALVNNPRLVLADE 171 (233)
T ss_pred CCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 89999999998654321 222334567889999999987766543 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 995 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||+|||+.++..+.+.|+++++ +|+|||+++|+++ ..+.+|++++|.+ |+++..|+.
T Consensus 172 Pt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~--~~~~~~~~~~l~~-G~i~~~~~~ 229 (233)
T PRK11629 172 PTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ--LAKRMSRQLEMRD-GRLTAELSL 229 (233)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhhCEEEEEEC-CEEEEEecc
Confidence 9999999999999999999975 5899999999975 3445689999985 799998885
No 150
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=343.45 Aligned_cols=201 Identities=24% Similarity=0.345 Sum_probs=171.0
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-----ccccceEEEEccCCC-CCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HSP 915 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~-~~~ 915 (1419)
+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++. .+.
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 97 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLF 97 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECCCcCccHHHHhhceEEEecCchhccc
Confidence 469999999999999999999999999999999999876 468999999987643 234578999999863 334
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc--cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT--SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~--~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
..||+|++.|..... ....++..+.++++++.+||. +..+.. ++.||||||||++||+||+.+|++|+||
T Consensus 98 ~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~LSgGq~qrv~iAraL~~~P~llllD 169 (287)
T PRK13637 98 EETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFELSGGQKRRVAIAGVVAMEPKILILD 169 (287)
T ss_pred cccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 579999999865432 233445556789999999996 555554 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 170 EPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~i~~~g~~ 229 (287)
T PRK13637 170 EPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GKCELQGTP 229 (287)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999865 899999999976 46678999999985 799999985
No 151
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.2e-35 Score=337.77 Aligned_cols=203 Identities=28% Similarity=0.379 Sum_probs=172.0
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-----------ccccceEEEEcc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----------ETFARISGYCEQ 909 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----------~~~~~~~gyv~Q 909 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|
T Consensus 15 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q 92 (250)
T PRK11264 15 GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQ 92 (250)
T ss_pred CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccccccchhhHHHHhhhhEEEEec
Confidence 3469999999999999999999999999999999999865 458999999987532 123567999999
Q ss_pred CCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCc
Q 000562 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1419)
Q Consensus 910 ~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~i 989 (1419)
++.+++.+|++|++.+...... ....+...+.++++++.+++.+..+.. ++.||||||||++||++|+.+|++
T Consensus 93 ~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~Gq~qrv~la~al~~~p~l 165 (250)
T PRK11264 93 NFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY-----PRRLSGGQQQRVAIARALAMRPEV 165 (250)
T ss_pred CcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----hhhCChHHHHHHHHHHHHhcCCCE
Confidence 9988889999999987543211 122333455678899999998766654 357999999999999999999999
Q ss_pred ceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 166 llLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 228 (250)
T PRK11264 166 ILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ-GRIVEQGPA 228 (250)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999877999999999976 46678999999985 799998874
No 152
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1e-35 Score=332.44 Aligned_cols=200 Identities=29% Similarity=0.418 Sum_probs=168.2
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc---c-ccceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~d~~~~~ 916 (1419)
++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.+++.
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 12 KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 4569999999999999999999999999999999999876 4689999999875431 1 24569999999999999
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHc-CCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELV-ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l-~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
+|++|++.+....+. ..+..+.+.++++.+ ++.+..+.. ++.||||||||++|||+|+.+|++|+||||
T Consensus 90 ~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 159 (222)
T cd03224 90 LTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGGEQQMLAIARALMSRPKLLLLDEP 159 (222)
T ss_pred CcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEECCC
Confidence 999999988654331 112234566777877 466555544 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 160 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (222)
T cd03224 160 SEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEGTA 216 (222)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeCCH
Confidence 9999999999999999999877899999999976 46788999999985 799988874
No 153
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=336.60 Aligned_cols=201 Identities=26% Similarity=0.350 Sum_probs=171.4
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVL 920 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~ 920 (1419)
++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+.+||++|++.+++.+||+
T Consensus 13 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 13 GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHH
Confidence 3569999999999999999999999999999999999865 458999999987643 234589999999888899999
Q ss_pred HHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 000562 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1419)
Q Consensus 921 E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD 1000 (1419)
|++.+....+. ....+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 89 e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD 160 (255)
T PRK11248 89 DNVAFGLQLAG---VEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQRVGIARALAANPQLLLLDEPFGALD 160 (255)
T ss_pred HHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCC
Confidence 99987654321 223334456889999999987766543 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEec-CCEEEEeCCC
Q 000562 1001 ARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKR-GGELIYAGPL 1054 (1419)
Q Consensus 1001 ~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~-gG~~~~~G~~ 1054 (1419)
+.++..+.+.|+++++ .|+|||+++|+++ ++...+|++++|++ +|+++..++.
T Consensus 161 ~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 161 AFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999854 5899999999986 57788999999984 5899988765
No 154
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=335.68 Aligned_cols=201 Identities=28% Similarity=0.405 Sum_probs=172.0
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCcc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 469999999999999999999999999999999999866 468999999987532 234567899999999999999
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc--ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS--LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~--~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
++||+.+....+. ...+...+.++++++.+++.+ ..+.. ++.||||||||++||++|+.+|++++|||||
T Consensus 92 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 9999988654431 223344556889999999985 55544 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 220 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQVGTP 220 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999865 899999999986 46788999999985 799988875
No 155
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.1e-35 Score=330.01 Aligned_cols=193 Identities=26% Similarity=0.342 Sum_probs=165.5
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc------cccceEEEEccCCCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHSP 915 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~d~~~~ 915 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... .+++.++|++|++.+++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLP 92 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEecChhhcc
Confidence 469999999999999999999999999999999999865 4689999999876421 24567999999998888
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
.+|++|++.+....+. ......++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++++||||
T Consensus 93 ~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~lllLDEP 164 (214)
T TIGR02673 93 DRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLSGGEQQRVAIARAIVNSPPLLLADEP 164 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 9999999988754331 222334456789999999987666543 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1045 (1419)
|+|||+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|++|
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 165 TGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 9999999999999999999877999999999986 566789999999863
No 156
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.4e-35 Score=340.42 Aligned_cols=186 Identities=22% Similarity=0.208 Sum_probs=140.4
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHHH
Q 000562 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLES 922 (1419)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~ 922 (1419)
+++.+++..++.-+..+++|+||+||||+++++.|..+ +..|-+.+++ +++++|-.|..+-+..+.|-+
T Consensus 378 ~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~--------r~ri~~f~Qhhvd~l~~~v~~- 446 (582)
T KOG0062|consen 378 QWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP--------RLRIKYFAQHHVDFLDKNVNA- 446 (582)
T ss_pred hhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc--------cceecchhHhhhhHHHHHhHH-
Confidence 68889999999999999999999999999999998654 3567666554 456899999755444444443
Q ss_pred HHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHH
Q 000562 923 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 1002 (1419)
Q Consensus 923 l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~ 1002 (1419)
+.+....+. ... ++..++-+..+||..-. . ...+.+||||||-||++|.....+|.+|+|||||+.||-.
T Consensus 447 vd~~~~~~p--G~~----~ee~r~hl~~~Gl~g~l---a-~~si~~LSGGQKsrvafA~~~~~~PhlLVLDEPTNhLD~d 516 (582)
T KOG0062|consen 447 VDFMEKSFP--GKT----EEEIRRHLGSFGLSGEL---A-LQSIASLSGGQKSRVAFAACTWNNPHLLVLDEPTNHLDRD 516 (582)
T ss_pred HHHHHHhCC--CCC----HHHHHHHHHhcCCCchh---h-hccccccCCcchhHHHHHHHhcCCCcEEEecCCCccccHH
Confidence 223333331 112 22356677888886421 1 1225689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCC
Q 000562 1003 AAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 1053 (1419)
Q Consensus 1003 ~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1053 (1419)
+-..+.++|++. +..||+++|+.+ -+-..|+++.+.++|...-..|.
T Consensus 517 sl~AL~~Al~~F---~GGVv~VSHd~~-fi~~~c~E~Wvve~g~vt~ieg~ 563 (582)
T KOG0062|consen 517 SLGALAKALKNF---NGGVVLVSHDEE-FISSLCKELWVVEDGKVTPIEGG 563 (582)
T ss_pred HHHHHHHHHHhc---CCcEEEEECcHH-HHhhcCceeEEEcCCcEEeeecc
Confidence 999999999886 568999999965 36678999999997544444554
No 157
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=8.6e-36 Score=337.68 Aligned_cols=206 Identities=27% Similarity=0.338 Sum_probs=170.7
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEEEccCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~~~ 914 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.++
T Consensus 14 ~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 14 GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 3569999999999999999999999999999999999876 468999999987532 12456799999999888
Q ss_pred CCccHHHHHHHHhhhcC-----CCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCc
Q 000562 915 PGLTVLESLLFSAWLRL-----PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~-----~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~i 989 (1419)
+.+||+|++.+...... .........+++++++++.+++.+..+.. +..||||||||++||++|+.+|++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~l 166 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR-----ADQLSGGQQQRVAIARALAQQPDL 166 (243)
T ss_pred ccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999976421100 00011123345678899999998766654 357999999999999999999999
Q ss_pred ceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 990 VFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+.+.+|++++|.+ |++++.|+..
T Consensus 167 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 231 (243)
T TIGR02315 167 ILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA-GEIVFDGAPS 231 (243)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecCCHH
Confidence 9999999999999999999999999764 899999999986 46678999999985 7999888753
No 158
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-35 Score=326.79 Aligned_cols=200 Identities=30% Similarity=0.385 Sum_probs=168.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1419)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|. +|+|.++|+++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999998775 9999999988753 356799999999888889999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000562 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1419)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1419)
||+.++....+... . .....++.+++.+||++..++.++ .|
T Consensus 92 e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------A------------------------EARERAEELLELVGLSGFENAYPH-----QL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCChhhhhCCcc-----cC
Confidence 99988643321100 0 011236778899999877666554 69
Q ss_pred ChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc--CCe
Q 000562 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS--EGQ 385 (1419)
Q Consensus 308 SGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~--~G~ 385 (1419)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.... +++|+.++|+..++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRET-GKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 9999999999999999999999999999999999999999999886432 4566778899999999999999999 799
Q ss_pred EEEEcCh
Q 000562 386 IVYQGPR 392 (1419)
Q Consensus 386 iv~~G~~ 392 (1419)
++..++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9988764
No 159
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-35 Score=330.11 Aligned_cols=204 Identities=25% Similarity=0.358 Sum_probs=172.6
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC------CceEEEEccCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQVA 222 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 222 (1419)
++|+|+|+++++||+++|+||||||||||+++|+|.+++. +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999875 9999999998765321 357999999999888
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
.+|++||+.+.....+.. . ......++.+++.+||++..++.+
T Consensus 96 ~~t~~e~l~~~~~~~~~~-------~---------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVP-------K---------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCC-------H---------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 999999998764322110 0 001123567899999987766655
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
+.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++. ++++|+.++|+..++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRE-LGLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 469999999999999999999999999999999999999999999998653 24567778899999999999999999
Q ss_pred CCeEEEEcChhhH
Q 000562 383 EGQIVYQGPRVSV 395 (1419)
Q Consensus 383 ~G~iv~~G~~~~~ 395 (1419)
+|++++.|+.+++
T Consensus 216 ~G~i~~~~~~~~~ 228 (233)
T cd03258 216 KGEVVEEGTVEEV 228 (233)
T ss_pred CCEEEEecCHHHH
Confidence 9999999987765
No 160
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-35 Score=327.64 Aligned_cols=200 Identities=31% Similarity=0.434 Sum_probs=168.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1419)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 46999999999999999999999999999999999998775 9999999998754332 4579999999988889999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1419)
+||+.++....+.. . . .....++.+++.+||++..++.++ .
T Consensus 90 ~~~l~~~~~~~~~~-------~---~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (213)
T cd03259 90 AENIAFGLKLRGVP-------K---A------------------------EIRARVRELLELVGLEGLLNRYPH-----E 130 (213)
T ss_pred HHHHHhHHHHcCCC-------H---H------------------------HHHHHHHHHHHHcCChhhhhcChh-----h
Confidence 99998764321100 0 0 011235678889999877776654 5
Q ss_pred CChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000562 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1419)
Q Consensus 307 LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 386 (1419)
|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.+++|+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRE-LGITTIYVTHDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998753 245677788999999999999999999999
Q ss_pred EEEc
Q 000562 387 VYQG 390 (1419)
Q Consensus 387 v~~G 390 (1419)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 161
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.8e-36 Score=308.24 Aligned_cols=209 Identities=20% Similarity=0.341 Sum_probs=180.7
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCC----ceEEEEccCCCCCC
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP----RTSAYVSQQDWQVA 222 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 222 (1419)
++++++|||+.+++||+++++|||||||||...++.|+..++ +|+|.+||.+++..+.. .-+||.||++..|-
T Consensus 16 kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 16 KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 347999999999999999999999999999999999999887 99999999999887653 45899999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
.+||+|||.-..+.+....+ ..+.+.+.+.+|+.++|.+++|..-.
T Consensus 93 ~LtV~dNi~~vlE~~~~d~~--------------------------------~~~~~~~l~~LL~ef~i~hlr~~~a~-- 138 (243)
T COG1137 93 KLTVEDNIMAVLEIREKDLK--------------------------------KAERKEELDALLEEFHITHLRDSKAY-- 138 (243)
T ss_pred cCcHHHHHHHHHhhhhcchh--------------------------------HHHHHHHHHHHHHHhchHHHhcCccc--
Confidence 99999999865544321100 00123346789999999999987643
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
.||||||+|+-|||||+.+|+.++||||++|+||.+..+|.+.++++.+. +.-|++.-|+..|+.+++||.++++
T Consensus 139 ---sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~r--giGvLITDHNVREtL~i~dRaYIi~ 213 (243)
T COG1137 139 ---SLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDR--GIGVLITDHNVRETLDICDRAYIIS 213 (243)
T ss_pred ---ccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhC--CceEEEccccHHHHHhhhheEEEEe
Confidence 59999999999999999999999999999999999999999999999763 5556667899999999999999999
Q ss_pred CCeEEEEcChhhHHH
Q 000562 383 EGQIVYQGPRVSVLD 397 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1419)
+|++..+|+++++.+
T Consensus 214 ~G~vla~G~p~ei~~ 228 (243)
T COG1137 214 DGKVLAEGSPEEIVN 228 (243)
T ss_pred cCeEEecCCHHHHhc
Confidence 999999999998863
No 162
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.3e-35 Score=338.39 Aligned_cols=203 Identities=19% Similarity=0.299 Sum_probs=171.9
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc------cccceEEEEccCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHS 914 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~d~~~ 914 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.++
T Consensus 19 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 19 NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 3569999999999999999999999999999999999876 4689999999875421 2345799999999888
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDE 994 (1419)
+.+|+.||+.+...... .......++.+.++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||
T Consensus 97 ~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~laral~~~p~lllLDE 169 (269)
T PRK11831 97 TDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SELSGGMARRAALARAIALEPDLIMFDE 169 (269)
T ss_pred CCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99999999987643221 1223334456788999999988776653 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 170 Pt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 228 (269)
T PRK11831 170 PFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKIVAHGSA 228 (269)
T ss_pred CCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999765 899999999975 57778999999985 799999875
No 163
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.2e-35 Score=329.61 Aligned_cols=200 Identities=28% Similarity=0.437 Sum_probs=164.4
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCC--CCcc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHS--PGLT 918 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~--~~lT 918 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. ..++.++|++|++.+. +.+|
T Consensus 11 ~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 11 GHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred CEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCc
Confidence 3569999999999999999999999999999999999865 46899999998653 3456799999997653 3489
Q ss_pred HHHHHHHHhhhcCCC-CCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 919 VLESLLFSAWLRLPS-EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
|+||+.+....+... ....+...+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+
T Consensus 87 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~ 161 (213)
T cd03235 87 VRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFA 161 (213)
T ss_pred HHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 999998754321100 0111223456789999999987666543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ | +++.|
T Consensus 162 ~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 162 GVDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 99999999999999999878999999999986 46678999999974 4 55554
No 164
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.7e-35 Score=328.67 Aligned_cols=194 Identities=27% Similarity=0.357 Sum_probs=166.2
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEEEccCCCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~~~~ 915 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 469999999999999999999999999999999999865 468999999987532 124567999999999999
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
.+|++|++.+....+. ...++.++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++++||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988754432 223334456789999999987766553 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCE
Q 000562 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~ 1047 (1419)
|+|||+.++..+.+.|++++++|+|||+++|++. .+.+.+|++++|++ |+
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999777999999999975 46667999999985 54
No 165
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-35 Score=339.42 Aligned_cols=206 Identities=23% Similarity=0.313 Sum_probs=171.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC-------CCCceEEEEccCCC-
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDW- 219 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~- 219 (1419)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 35999999999999999999999999999999999998775 99999999987531 12357999999862
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc-cccccc
Q 000562 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1419)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1419)
.+...||+||+.|+....+... .+....++.+++.+||+ +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVSE----------------------------------EDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCChhhhhCC
Confidence 3446799999998654221100 00122467889999996 455655
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
+ +.|||||||||+|||||+.+|++++|||||+|||+.++.++.+.|++++.. .+++|+.++|+.+++.+++|+|
T Consensus 143 ~-----~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 P-----FELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEE
Confidence 4 469999999999999999999999999999999999999999999998754 3566777999999999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000562 379 ILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1419)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIF 234 (290)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999988764
No 166
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-35 Score=349.60 Aligned_cols=205 Identities=28% Similarity=0.421 Sum_probs=165.3
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC---CCceEEEEccCCCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 225 (1419)
++++|+|+++++|+.++|+|+||||||||+++|+|+++++ +|+|.+||++..+.. .+++++||+|++.+++ .|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-cc
Confidence 6899999999999999999999999999999999999876 999999999988765 4689999999998555 59
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
+||||.++.... ..+ ++.+..+. ..+.+.+.-+...||.+|+ ..+
T Consensus 411 ireNi~l~~~~~----s~e------------------~i~~al~~------------a~l~~~v~~p~GLdt~ige-~G~ 455 (559)
T COG4988 411 IRENILLARPDA----SDE------------------EIIAALDQ------------AGLLEFVPKPDGLDTVIGE-GGA 455 (559)
T ss_pred HHHHhhccCCcC----CHH------------------HHHHHHHH------------hcHHHhhcCCCcccchhcc-CCC
Confidence 999999864211 000 11000000 0112222225577999996 567
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
+|||||+|||++|||++.+++++++||||++||.++...|.+.|.++++ ++| ++.++|.. +...-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~kt-vl~itHrl-~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKT-VLVITHRL-EDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCe-EEEEEcCh-HHHhcCCEEEEecCCc
Confidence 9999999999999999999999999999999999999999999999886 344 44466654 4456789999999999
Q ss_pred EEEEcChhhHH
Q 000562 386 IVYQGPRVSVL 396 (1419)
Q Consensus 386 iv~~G~~~~~~ 396 (1419)
++++|.++++.
T Consensus 532 l~~~g~~~~L~ 542 (559)
T COG4988 532 LVEQGTHEELS 542 (559)
T ss_pred eeccCCHHHHh
Confidence 99999999885
No 167
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-35 Score=335.75 Aligned_cols=206 Identities=22% Similarity=0.306 Sum_probs=174.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-------CceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1419)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+
T Consensus 37 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 113 (269)
T cd03294 37 TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFAL 113 (269)
T ss_pred ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCccc
Confidence 46999999999999999999999999999999999999775 8999999988754321 3569999999998
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1419)
++++||+||+.+.....+... . .....++++++.+||++..++.++
T Consensus 114 ~~~~tv~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~ 159 (269)
T cd03294 114 LPHRTVLENVAFGLEVQGVPR----------A------------------------EREERAAEALELVGLEGWEHKYPD 159 (269)
T ss_pred CCCCcHHHHHHHHHHhcCCCH----------H------------------------HHHHHHHHHHHHcCCHhHhhCCcc
Confidence 889999999988643321100 0 011235678899999887777664
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 380 (1419)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.+++|++++
T Consensus 160 -----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiii~tH~~~~~~~~~d~v~~ 233 (269)
T cd03294 160 -----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAE-LQKTIVFITHDLDEALRLGDRIAI 233 (269)
T ss_pred -----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEE
Confidence 59999999999999999999999999999999999999999999998753 345677788999999999999999
Q ss_pred EcCCeEEEEcChhhHH
Q 000562 381 LSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1419)
|++|++++.|+.+++.
T Consensus 234 l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 234 MKDGRLVQVGTPEEIL 249 (269)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999987764
No 168
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-35 Score=337.56 Aligned_cols=222 Identities=27% Similarity=0.366 Sum_probs=179.5
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC-------CCceEEEEccCC-CC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQD-WQ 220 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d-~~ 220 (1419)
.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.++.... .++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999876 999999999875311 245799999986 24
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc-ccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLV 299 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 299 (1419)
+...||.||+.|+....+... .+...++.++++.+||. ...++.
T Consensus 97 l~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~- 141 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIPK----------------------------------EKAEKIAAEKLEMVGLADEFWEKS- 141 (288)
T ss_pred cccchHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhccCC-
Confidence 445799999998754322100 00122467788999996 344544
Q ss_pred cCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000562 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1419)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 379 (1419)
++.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+. +.+|+.++|+..++.+++|+|+
T Consensus 142 ----~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~--g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 142 ----PFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQS--GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred ----cccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHC--CCEEEEEecCHHHHHHhCCEEE
Confidence 4579999999999999999999999999999999999999999999988652 5667778999999999999999
Q ss_pred EEcCCeEEEEcChhhHH---HHHHhCCCCCCCCCChHH
Q 000562 380 LLSEGQIVYQGPRVSVL---DFFASMGFSCPKRKNVAD 414 (1419)
Q Consensus 380 lL~~G~iv~~G~~~~~~---~~F~~~G~~~p~~~~~ad 414 (1419)
+|++|+++++|+++++. ++++..|+.+|.....++
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~ 253 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFAD 253 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHH
Confidence 99999999999998874 334566777666544443
No 169
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=327.62 Aligned_cols=198 Identities=33% Similarity=0.490 Sum_probs=168.3
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCcc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
+..+|+|+|+++++| +++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 12 KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 356999999999999 999999999999999999999866 468999999987543 234567999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsg 998 (1419)
|+|++.+....+. ....+..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++++|||||+|
T Consensus 89 v~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~ 160 (211)
T cd03264 89 VREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRRRVGIAQALVGDPSILIVDEPTAG 160 (211)
T ss_pred HHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999988655432 122333456788999999987766553 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
||+.++..+.+.|+++++ +.|||+++|++. .+.+.+|++++|++ |+++..|
T Consensus 161 LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 161 LDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred CCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999976 599999999976 46678999999985 7887654
No 170
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=333.96 Aligned_cols=203 Identities=25% Similarity=0.365 Sum_probs=172.5
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc----ccccceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d~~~~~ 916 (1419)
++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 15 ~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 15 GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 4579999999999999999999999999999999999866 468999999987542 1234679999999988888
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
+||+||+.+....+. ....++.+..++++++.+++.+..+.. .+.||||||||++||++|+.+|++|+|||||
T Consensus 93 ~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 165 (241)
T PRK10895 93 LSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGGERRRVEIARALAANPKFILLDEPF 165 (241)
T ss_pred CcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999987643321 122233456688899999998766554 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|||+.++..+.+.+++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 166 ~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 221 (241)
T PRK10895 166 AGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHGTP 221 (241)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeCCH
Confidence 999999999999999999877999999999975 57788999999985 799998875
No 171
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.8e-35 Score=327.31 Aligned_cols=195 Identities=25% Similarity=0.360 Sum_probs=164.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1419)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|+++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999998775 999999998875432 235799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+.+||+||+.++....+... .+....++++++.+||++..++.++
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 137 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHALPM- 137 (216)
T ss_pred ccccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCChh-
Confidence 99999999988654321100 0012246778899999877766554
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+.+++.+++|++++|
T Consensus 138 ----~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 138 ----QLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRR--GTTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 69999999999999999999999999999999999999999999988642 456777889999999999999999
Q ss_pred cCCeE
Q 000562 382 SEGQI 386 (1419)
Q Consensus 382 ~~G~i 386 (1419)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99975
No 172
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-35 Score=327.69 Aligned_cols=205 Identities=29% Similarity=0.376 Sum_probs=172.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1419)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 36999999999999999999999999999999999998775 999999998764321 2357999999998899999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 90 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 130 (220)
T cd03265 90 GWENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLVK----- 130 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCChh-----
Confidence 9999988643321100 0012246778999999887776664
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|++|+
T Consensus 131 ~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 131 TYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEF-GMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 599999999999999999999999999999999999999999999987532 4567778999999999999999999999
Q ss_pred EEEEcChhhH
Q 000562 386 IVYQGPRVSV 395 (1419)
Q Consensus 386 iv~~G~~~~~ 395 (1419)
++..|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999887653
No 173
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-35 Score=304.56 Aligned_cols=206 Identities=28% Similarity=0.464 Sum_probs=174.6
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCC---ceEEEEccCCCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP---RTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lT 225 (1419)
.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|++++||++++...+. +.-+..+|+-.+-+..|
T Consensus 15 ~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFt 91 (259)
T COG4559 15 RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFT 91 (259)
T ss_pred eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceE
Confidence 5899999999999999999999999999999999999886 99999999999887653 56689999987777889
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+|-+.++..-.+.+.. | .+....++..|...++.+.+... .+
T Consensus 92 v~eVV~mGr~p~~~g~~-----------------~---------------~e~~~i~~~ala~~d~~~la~R~-----y~ 134 (259)
T COG4559 92 VQEVVQMGRIPHRSGRE-----------------P---------------EEDERIAAQALAATDLSGLAGRD-----YR 134 (259)
T ss_pred HHHHHHhcccccccCCC-----------------c---------------hhhHHHHHHHHHHcChhhhhccc-----hh
Confidence 99999998653322111 0 01233467788888888776533 45
Q ss_pred CCChHHhHHHHHHHHHhC------CCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000562 306 GISGGQKKRLTTGELLVG------PARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~------~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 379 (1419)
.|||||||||.+||.|+. ++++||||||||+||...+..+++..|++++. +..|+.++|+..-+..++|+|+
T Consensus 135 ~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~--g~~V~~VLHDLNLAA~YaDriv 212 (259)
T COG4559 135 TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE--GGAVLAVLHDLNLAAQYADRIV 212 (259)
T ss_pred hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc--CCcEEEEEccchHHHHhhheee
Confidence 799999999999999974 45699999999999999999999999999985 4566778999999999999999
Q ss_pred EEcCCeEEEEcChhhHH
Q 000562 380 LLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 380 lL~~G~iv~~G~~~~~~ 396 (1419)
+|++||++..|++++++
T Consensus 213 ll~~Grv~a~g~p~~vl 229 (259)
T COG4559 213 LLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeCCeEeecCCHHHhc
Confidence 99999999999998876
No 174
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=9.1e-36 Score=313.03 Aligned_cols=210 Identities=24% Similarity=0.365 Sum_probs=189.6
Q ss_pred ccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCC
Q 000562 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI 912 (1419)
Q Consensus 833 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~ 912 (1419)
.+.+++++.+.+++|+||.++||++++++|+|||||||++++|.|... +.+|+|.++|.+.++. .+.+|||.|.+-.
T Consensus 6 e~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~-~~~rIGyLPEERG 82 (300)
T COG4152 6 EGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQE-IKNRIGYLPEERG 82 (300)
T ss_pred ecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhh-hhhhcccChhhhc
Confidence 445566788999999999999999999999999999999999999877 5699999999987654 3557899999999
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
++|.+||.|.|.|-|.|+. .+.++....++..|+.+++.......+ ..||.|++|++.+-.+++++|++++|
T Consensus 83 Ly~k~tv~dql~yla~LkG---m~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQKIQfisaviHePeLlIL 154 (300)
T COG4152 83 LYPKMTVEDQLKYLAELKG---MPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQKIQFISAVIHEPELLIL 154 (300)
T ss_pred cCccCcHHHHHHHHHHhcC---CcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHHHHHHHHHhcCCCEEEe
Confidence 9999999999999999884 455666777899999999998887765 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|||.|||||.+.+.+-+.+.++++.|.|||+++|+++ .+-++||++++|++ |+.|.+|+..
T Consensus 155 DEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v~ 215 (300)
T COG4152 155 DEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTVE 215 (300)
T ss_pred cCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccHH
Confidence 9999999999999999999999999999999999987 68899999999985 7999999863
No 175
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.7e-35 Score=330.72 Aligned_cols=201 Identities=27% Similarity=0.416 Sum_probs=169.8
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCcc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ....+.++|++|++.+++.+|
T Consensus 13 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 13 ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 3569999999999999999999999999999999999865 468999999987532 122357899999988888999
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsg 998 (1419)
++|++.+.+..+. .......+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++++|||||+|
T Consensus 91 ~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEP~~~ 162 (236)
T TIGR03864 91 VRQNLRYHAALHG---LSRAEARERIAALLARLGLAERADDKV-----RELNGGHRRRVEIARALLHRPALLLLDEPTVG 162 (236)
T ss_pred HHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccC
Confidence 9999987654431 223334456788999999987766554 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 999 LDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 999 LD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||+.++..+.+.|+++++ +|+|||+++|+++. + ..+|++++|++ |+++..|+.
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i~~l~~-G~i~~~~~~ 216 (236)
T TIGR03864 163 LDPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRLVVLHR-GRVLADGAA 216 (236)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEEEEEeC-CeEEEeCCH
Confidence 999999999999999975 58999999999863 4 45999999985 789988874
No 176
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.8e-35 Score=327.63 Aligned_cols=193 Identities=28% Similarity=0.393 Sum_probs=162.8
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCC-CCCCc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~-~~~~l 917 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 569999999999999999999999999999999999865 468999999987542 234567999999974 36678
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
|++|++.+....+. .......+.++++++.+++.+..+..+ ..||||||||++|||+|+.+|++++|||||+
T Consensus 92 t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENLG---LPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999988653321 222333456788999999987666543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000562 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1045 (1419)
|||+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|.+|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999976 466679999999863
No 177
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=4.1e-35 Score=327.57 Aligned_cols=199 Identities=25% Similarity=0.376 Sum_probs=171.4
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVL 920 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~ 920 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++.+|++
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 12 KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 4579999999999999999999999999999999999865 56899999998754322 25789999999888889999
Q ss_pred HHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 000562 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1419)
Q Consensus 921 E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD 1000 (1419)
|++.+....+. .. ++.+.++++.+++.+..+..+ ..||||||||++||++++.+|++++|||||+|||
T Consensus 89 ~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~llllDEP~~~LD 156 (223)
T TIGR03740 89 ENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLD 156 (223)
T ss_pred HHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCC
Confidence 99987654432 11 234678899999987766543 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|+..+
T Consensus 157 ~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 210 (223)
T TIGR03740 157 PIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKINK 210 (223)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChhh
Confidence 99999999999999877999999999986 46688999999985 79999998643
No 178
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.8e-35 Score=328.22 Aligned_cols=196 Identities=27% Similarity=0.371 Sum_probs=166.4
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-----ccccceEEEEccCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIHSP 915 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~~~ 915 (1419)
++.+|+++|++++|||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++
T Consensus 12 ~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 12 DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 3569999999999999999999999999999999999876 468999999987531 234567999999999889
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
.+|++|++.+...... ....++..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++++||||
T Consensus 90 ~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP 162 (213)
T cd03262 90 HLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGGQQQRVAIARALAMNPKVMLFDEP 162 (213)
T ss_pred CCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999987642111 1223334556788999999987666553 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCE
Q 000562 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~ 1047 (1419)
|+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 163 ~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 163 TSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred ccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999877999999999986 56678999999986 54
No 179
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=341.51 Aligned_cols=201 Identities=25% Similarity=0.327 Sum_probs=169.9
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-------ccccceEEEEccCCC-C
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDI-H 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~d~-~ 913 (1419)
..+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|+++.. ..+++.+|||+|++. .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQ 97 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhhEEEEeeCchhh
Confidence 469999999999999999999999999999999999876 468999999987631 234567999999863 2
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+...||+||+.|+.... ....++..++++++++.++|. +..+.. ++.|||||||||+||++|+.+|++|+|
T Consensus 98 l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgGq~qrv~lAraL~~~P~llll 169 (290)
T PRK13634 98 LFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PFELSGGQMRRVAIAGVLAMEPEVLVL 169 (290)
T ss_pred hhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 33579999999875432 223344456789999999996 555554 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.++..+.+.|++++++ |.|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 170 DEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G~i~~~g~~ 230 (290)
T PRK13634 170 DEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-GTVFLQGTP 230 (290)
T ss_pred ECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999999999765 899999999986 57788999999985 899999985
No 180
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=338.33 Aligned_cols=201 Identities=25% Similarity=0.326 Sum_probs=171.2
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCC-CCCCc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~-~~~~l 917 (1419)
..+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++. .++..
T Consensus 18 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 18 TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 469999999999999999999999999999999999876 468999999987643 234567999999863 44568
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
||+|++.|..... ........+.++++++.++|.+..+..+ ..||||||||++||+||+.+|++|+|||||+
T Consensus 96 tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgG~~qrv~laraL~~~p~llllDEPt~ 167 (274)
T PRK13647 96 TVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMA 167 (274)
T ss_pred cHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 9999998864322 2233344456889999999987777654 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+.++..+++.|++++++|+|||+++|+++ .+.+.+|++++|++ |++++.|+.
T Consensus 168 ~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 222 (274)
T PRK13647 168 YLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAEGDK 222 (274)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 99999999999999999877999999999976 46678999999985 799999985
No 181
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.8e-35 Score=342.08 Aligned_cols=206 Identities=30% Similarity=0.387 Sum_probs=174.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1419)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 35999999999999999999999999999999999998775 999999998874322 2467999999998889999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+||+.+.....+... . +....++.+++.+||++..++.++
T Consensus 94 v~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~ll~~~~l~~~~~~~~~----- 134 (303)
T TIGR01288 94 VRENLLVFGRYFGMST----------R------------------------EIEAVIPSLLEFARLESKADVRVA----- 134 (303)
T ss_pred HHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHCCChhHhcCchh-----
Confidence 9999986443221100 0 011235678889999988877765
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.++||+|++|++|+
T Consensus 135 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~--g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 135 LLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLAR--GKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC--CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 59999999999999999999999999999999999999999999998652 5667778999999999999999999999
Q ss_pred EEEEcChhhHHH
Q 000562 386 IVYQGPRVSVLD 397 (1419)
Q Consensus 386 iv~~G~~~~~~~ 397 (1419)
+++.|+++++..
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999988753
No 182
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-35 Score=335.70 Aligned_cols=204 Identities=23% Similarity=0.326 Sum_probs=171.0
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCC-CCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDW-QVAEM 224 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 224 (1419)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|. +|+|.++|.++..... ++.++|++|++. .++..
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 21 YTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred eeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 5999999999999999999999999999999999999876 9999999998864322 357999999973 67788
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||+|||.|+....+... .+....++++++.+||++..+..+
T Consensus 98 tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~----- 138 (279)
T PRK13650 98 TVEDDVAFGLENKGIPH----------------------------------EEMKERVNEALELVGMQDFKEREP----- 138 (279)
T ss_pred cHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc-----
Confidence 99999988643221100 001224677899999987766655
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++ ..+|+|++|++|
T Consensus 139 ~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tilivtH~~~~~-~~~dri~~l~~G 216 (279)
T PRK13650 139 ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDY-QMTVISITHDLDEV-ALSDRVLVMKNG 216 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999987643 55666688888888 589999999999
Q ss_pred eEEEEcChhhHH
Q 000562 385 QIVYQGPRVSVL 396 (1419)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1419)
+++..|+++++.
T Consensus 217 ~i~~~g~~~~~~ 228 (279)
T PRK13650 217 QVESTSTPRELF 228 (279)
T ss_pred EEEEECCHHHHH
Confidence 999999988764
No 183
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.1e-35 Score=330.01 Aligned_cols=200 Identities=25% Similarity=0.309 Sum_probs=163.8
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEEEccCC--CCC
Q 000562 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IHS 914 (1419)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d--~~~ 914 (1419)
.+|+|+|+++++||++||+|||||||||||++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++ .+.
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLN 96 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccchhhHHHhhccEEEEecCchhhcC
Confidence 69999999999999999999999999999999999865 468999999987643 23456799999998 456
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
+.+||+||+.+......+. ...+..+..++++++.+++. +..+.. +..||||||||++|||+|+.+|++|+||
T Consensus 97 ~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLD 170 (228)
T cd03257 97 PRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PHELSGGQRQRVAIARALALNPKLLIAD 170 (228)
T ss_pred CcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----chhcCHHHHHHHHHHHHHhcCCCEEEec
Confidence 7899999998865433221 11111122235788889884 455544 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
|||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|
T Consensus 171 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 228 (228)
T cd03257 171 EPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-GKIVEEG 228 (228)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-CEEEecC
Confidence 999999999999999999999866 899999999986 46668999999985 7887654
No 184
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.2e-36 Score=361.85 Aligned_cols=216 Identities=25% Similarity=0.423 Sum_probs=180.8
Q ss_pred cceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCc
Q 000562 814 PLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY 893 (1419)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~ 893 (1419)
.-.+.|+|+++.++.. ++.++|+|+||+|+|||.+||+||||+||||+.++|-+... +.+|+|.+||+
T Consensus 463 ~G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~ 530 (716)
T KOG0058|consen 463 QGVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGV 530 (716)
T ss_pred cceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCe
Confidence 3468899998888643 35679999999999999999999999999999999998766 67999999999
Q ss_pred cCCc---ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHH-----HHHHHHHHHcCCccccCCcccCCC
Q 000562 894 PKRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQR-----AFVEEVMELVELTSLSGALIGLPG 965 (1419)
Q Consensus 894 ~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~-----~~v~~vl~~l~l~~~~~~~~g~~~ 965 (1419)
|+++ ..+++.+|+|.|+|.+|.. |++||+.|+.. +.+.++.. +.+.+-+. ++.+-.|+.+|..|
T Consensus 531 ~i~~~~~~~lr~~Ig~V~QEPvLFs~-sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI~--~~p~gY~T~VGEkG 602 (716)
T KOG0058|consen 531 PISDINHKYLRRKIGLVGQEPVLFSG-SIRENIAYGLD-----NATDEEIEAAAKMANAHEFIT--NFPDGYNTVVGEKG 602 (716)
T ss_pred ehhhcCHHHHHHHeeeeeccceeecc-cHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHH--hCccccccccCCcc
Confidence 9754 4578899999999999864 99999999753 22322221 12222222 45666789999766
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000562 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1419)
Q Consensus 966 ~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1045 (1419)
. .||||||||++|||||++||+||||||+||.||+++...|.++|.++.+ ++|||++.|+.| ..+.+|+|+++++
T Consensus 603 ~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~- 677 (716)
T KOG0058|consen 603 S-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK- 677 (716)
T ss_pred c-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC-
Confidence 4 6999999999999999999999999999999999999999999998764 699999999975 6789999999986
Q ss_pred CEEEEeCCC
Q 000562 1046 GELIYAGPL 1054 (1419)
Q Consensus 1046 G~~~~~G~~ 1054 (1419)
|+++..|.-
T Consensus 678 G~V~E~G~h 686 (716)
T KOG0058|consen 678 GRVVEMGTH 686 (716)
T ss_pred CeEEecccH
Confidence 799999963
No 185
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=334.33 Aligned_cols=202 Identities=22% Similarity=0.316 Sum_probs=171.3
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc----------------ccccceE
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----------------ETFARIS 904 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~~~ 904 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.+
T Consensus 17 ~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 17 EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 3569999999999999999999999999999999999876 458999999986531 2345679
Q ss_pred EEEccCCCCCCCccHHHHHHHHhh-hcCCCCCcHHHHHHHHHHHHHHcCCcccc-CCcccCCCCCCCCHHHHHHHHHHHH
Q 000562 905 GYCEQNDIHSPGLTVLESLLFSAW-LRLPSEIELETQRAFVEEVMELVELTSLS-GALIGLPGINGLSTEQRKRLTIAVE 982 (1419)
Q Consensus 905 gyv~Q~d~~~~~lTv~E~l~f~a~-lr~~~~~~~~~~~~~v~~vl~~l~l~~~~-~~~~g~~~~~~lSgGqrqrl~iA~~ 982 (1419)
+|++|++.+++.+|++||+.+... .+ .....+.++++.++++.+++.+.. +.. +..||||||||++|||+
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LS~G~~qrv~lara 166 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQGKY-----PVHLSGGQQQRVSIARA 166 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHH
Confidence 999999999999999999987542 21 122334456688999999997653 433 35799999999999999
Q ss_pred HhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 983 LVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 983 L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|++ |++++.|+.
T Consensus 167 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 167 LAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSHVIFLHQ-GKIEEEGAP 236 (257)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999999999999877999999999986 46667999999986 799998875
No 186
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.5e-35 Score=327.91 Aligned_cols=196 Identities=26% Similarity=0.327 Sum_probs=166.7
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---c---cccceEEEEccCCCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---E---TFARISGYCEQNDIHSP 915 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~---~~~~~~gyv~Q~d~~~~ 915 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. . .+++.++|++|++.+++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLM 92 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCChhHHHHHHhheEEEecCccccc
Confidence 469999999999999999999999999999999999876 468999999987532 1 24567999999998888
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
.+|++|++.+....+. ...++..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+||||
T Consensus 93 ~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 164 (222)
T PRK10908 93 DRTVYDNVAIPLIIAG---ASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLSGGEQQRVGIARAVVNKPAVLLADEP 164 (222)
T ss_pred cccHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988654331 223334456788999999987666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEE
Q 000562 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI 1049 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~ 1049 (1419)
|+|||+.++..+.+.|++++++|.|||+++|+++ ++...+|++++|++ |+++
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 216 (222)
T PRK10908 165 TGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHLH 216 (222)
T ss_pred CCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEc
Confidence 9999999999999999999877899999999986 46677899999986 6653
No 187
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=5.1e-35 Score=329.91 Aligned_cols=214 Identities=26% Similarity=0.365 Sum_probs=173.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1419)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 36999999999999999999999999999999999998775 9999999998765432 2459999999998999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
+||+||+.++........ .. . ... .. ...+....++++++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~~-~~------~---~~~-~~-------------~~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (236)
T cd03219 90 LTVLENVMVAAQARTGSG-LL------L---ARA-RR-------------EEREARERAEELLERVGLADLADRPA---- 141 (236)
T ss_pred CCHHHHHHHHHhhccccc-cc------c---ccc-cc-------------cHHHHHHHHHHHHHHcCccchhhCCh----
Confidence 999999988654221100 00 0 000 00 00011234678899999987666655
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
+.|||||||||+|||||+.+|++++|||||+|||..++..+.+.|+++++ . +++|+.++|+..++.+++|++++|++
T Consensus 142 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 142 -GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-R-GITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999999875 3 45677788999999999999999999
Q ss_pred CeEEEEcChhhH
Q 000562 384 GQIVYQGPRVSV 395 (1419)
Q Consensus 384 G~iv~~G~~~~~ 395 (1419)
|++++.|+++++
T Consensus 219 G~i~~~~~~~~~ 230 (236)
T cd03219 219 GRVIAEGTPDEV 230 (236)
T ss_pred CEEEeecCHHHh
Confidence 999999988775
No 188
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-35 Score=328.83 Aligned_cols=209 Identities=29% Similarity=0.391 Sum_probs=172.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1419)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 35999999999999999999999999999999999998775 9999999988754332 4579999999988889999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1419)
+||+.++....+...+.+ . .+....++.+++.+||++..++.++ .
T Consensus 92 ~e~l~~~~~~~~~~~~~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 136 (239)
T cd03296 92 FDNVAFGLRVKPRSERPP------E------------------------AEIRAKVHELLKLVQLDWLADRYPA-----Q 136 (239)
T ss_pred HHHHhhhhhhccccccCC------H------------------------HHHHHHHHHHHHHcCChhhhhcChh-----h
Confidence 999988643221100000 0 0011235678899999876666554 5
Q ss_pred CChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000562 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1419)
Q Consensus 307 LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 386 (1419)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+.+|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDEL-HVTTVFVTHDQEEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCeE
Confidence 99999999999999999999999999999999999999999999987532 45677788998999999999999999999
Q ss_pred EEEcChhhH
Q 000562 387 VYQGPRVSV 395 (1419)
Q Consensus 387 v~~G~~~~~ 395 (1419)
++.|+.+++
T Consensus 216 ~~~~~~~~~ 224 (239)
T cd03296 216 EQVGTPDEV 224 (239)
T ss_pred EEecCHHHH
Confidence 999988765
No 189
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-35 Score=341.32 Aligned_cols=201 Identities=25% Similarity=0.344 Sum_probs=170.0
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCC-------------------------
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR------------------------- 896 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~------------------------- 896 (1419)
..+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLL--PDTGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKI 97 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEEeceeccccccccccccccccccccccccccc
Confidence 359999999999999999999999999999999999876 45799999986531
Q ss_pred --cccccceEEEEccCC-CCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHH
Q 000562 897 --QETFARISGYCEQND-IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTE 972 (1419)
Q Consensus 897 --~~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgG 972 (1419)
....++.+|||+|++ ..+...||+|++.|+.... ....++..++++++++.+||. +..+.. +..||||
T Consensus 98 ~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgG 169 (305)
T PRK13651 98 KKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYIELVGLDESYLQRS-----PFELSGG 169 (305)
T ss_pred chHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hhhCCHH
Confidence 123456799999985 3344579999999875432 233445556789999999996 566654 3579999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 973 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 973 qrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||+++|+++ .+.+.+|++++|++ |++++.|
T Consensus 170 qkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~-~~~~~adrv~vl~~-G~i~~~g 247 (305)
T PRK13651 170 QKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLD-NVLEWTKRTIFFKD-GKIIKDG 247 (305)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999976 47788999999985 7999999
Q ss_pred CC
Q 000562 1053 PL 1054 (1419)
Q Consensus 1053 ~~ 1054 (1419)
+.
T Consensus 248 ~~ 249 (305)
T PRK13651 248 DT 249 (305)
T ss_pred CH
Confidence 86
No 190
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=4.8e-35 Score=332.12 Aligned_cols=203 Identities=27% Similarity=0.343 Sum_probs=169.5
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc---eEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
+..+|+|+|++|++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.+... ...++.++|++|++.
T Consensus 13 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 92 (247)
T TIGR00972 13 EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPN 92 (247)
T ss_pred CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcc
Confidence 346999999999999999999999999999999999986521 128999999987642 234567999999988
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc----cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT----SLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~----~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ 988 (1419)
+++ .|++||+.+....+. .....+..+.++++++.+++. +..+.. +..||||||||++||++|+.+|+
T Consensus 93 ~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~ 164 (247)
T TIGR00972 93 PFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS-----ALGLSGGQQQRLCIARALAVEPE 164 (247)
T ss_pred cCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC-----cccCCHHHHHHHHHHHHHhcCCC
Confidence 888 999999998754431 112334455678899999997 444443 45799999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+++|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 165 llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (247)
T TIGR00972 165 VLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD-GELVEYGPT 227 (247)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999876 489999999986 46778999999986 799998875
No 191
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.8e-35 Score=325.97 Aligned_cols=195 Identities=25% Similarity=0.387 Sum_probs=163.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-------CceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1419)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|+++..... ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999998775 9999999998765431 3579999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1419)
++.+||+||+.++....+... . .....++.+++.+||++..++.++
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~ 139 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------K------------------------ERRERAEELLERVGLGDRLNHYPS 139 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------H------------------------HHHHHHHHHHHHcCCchhhhcChh
Confidence 999999999988654321100 0 011236778999999877666554
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 380 (1419)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++. .+|++++
T Consensus 140 -----~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 140 -----ELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEA-GTTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred -----hcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHh-hhcEEEE
Confidence 699999999999999999999999999999999999999999999987532 456666888888876 9999999
Q ss_pred EcCCeE
Q 000562 381 LSEGQI 386 (1419)
Q Consensus 381 L~~G~i 386 (1419)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 192
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.9e-35 Score=374.05 Aligned_cols=215 Identities=26% Similarity=0.398 Sum_probs=178.8
Q ss_pred hcCCCcceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccC
Q 000562 141 YRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQ 217 (1419)
Q Consensus 141 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~ 217 (1419)
.++.+++.+||+|+|+++++|+.+||+|||||||||.+.+|-..++|. +|+|.++|+++++.+. |+.+|.|+|+
T Consensus 996 ~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQE 1072 (1228)
T KOG0055|consen 996 AYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQE 1072 (1228)
T ss_pred eCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceeccC
Confidence 356678889999999999999999999999999999999999999886 9999999999998875 5889999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccc
Q 000562 218 DWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1419)
Q Consensus 218 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 297 (1419)
|.+|. .|+||||.++.. .-..+.+.++++... ..+. +.+|++.+||
T Consensus 1073 P~LF~-~TIrENI~YG~~----~vs~~eIi~Aak~AN--------------------------aH~F---I~sLP~GyDT 1118 (1228)
T KOG0055|consen 1073 PVLFN-GTIRENIAYGSE----EVSEEEIIEAAKLAN--------------------------AHNF---ISSLPQGYDT 1118 (1228)
T ss_pred chhhc-ccHHHHHhccCC----CCCHHHHHHHHHHhh--------------------------hHHH---HhcCcCcccC
Confidence 99765 599999999721 111222223222211 1111 4579999999
Q ss_pred cccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000562 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1419)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 377 (1419)
.||+++. +||||||||++||||+++||+||+|||.||+||+++.+-+.++|.+... ++|+|+ +.|. ..+.+-+|.
T Consensus 1119 ~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~--gRT~Iv-IAHR-LSTIqnaD~ 1193 (1228)
T KOG0055|consen 1119 RVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAME--GRTTIV-IAHR-LSTIQNADV 1193 (1228)
T ss_pred ccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhc--CCcEEE-Eecc-hhhhhcCCE
Confidence 9998765 6999999999999999999999999999999999999999999998753 677776 4443 445678999
Q ss_pred EEEEcCCeEEEEcChhhHHH
Q 000562 378 VILLSEGQIVYQGPRVSVLD 397 (1419)
Q Consensus 378 vilL~~G~iv~~G~~~~~~~ 397 (1419)
|+|+++|+|+++|++++++.
T Consensus 1194 I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1194 IAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred EEEEECCEEEecccHHHHHh
Confidence 99999999999999999975
No 193
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=9.7e-35 Score=340.37 Aligned_cols=208 Identities=20% Similarity=0.250 Sum_probs=174.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC------CCceEEEEccCC--C
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--W 219 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~ 219 (1419)
..+|+|||++|++||+++|+|+||||||||+++|+|.+.+. +|+|.++|.++.+.. .++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 57999999999999999999999999999999999999775 999999999886543 235799999997 5
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc-cccccc
Q 000562 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1419)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1419)
+++.+||.||+.+......... + + .+....++++++.+||. ...++.
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~~--~------~------------------------~~~~~~~~~~l~~vgl~~~~~~~~ 158 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPKL--S------R------------------------QEVKDRVKAMMLKVGLLPNLINRY 158 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccCC--C------H------------------------HHHHHHHHHHHHHcCCChHHhcCC
Confidence 7889999999988643221000 0 0 01123467789999994 344544
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
...|||||||||+||+||+.+|++|++||||+|||..++.++.+.|+++.+.. +++++.++|+...+.+++|+|
T Consensus 159 -----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-~~til~iTHdl~~~~~~~dri 232 (331)
T PRK15079 159 -----PHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREM-GLSLIFIAHDLAVVKHISDRV 232 (331)
T ss_pred -----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEE
Confidence 45699999999999999999999999999999999999999999999987643 567777999999999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000562 379 ILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1419)
++|++|++++.|+.+++.
T Consensus 233 ~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999988874
No 194
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-35 Score=332.91 Aligned_cols=193 Identities=22% Similarity=0.304 Sum_probs=166.5
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHH
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 921 (1419)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. ..++.++|++|++.+++.+||+|
T Consensus 25 ~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 25 RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPLA--EAREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEHH--HhhCceEEEecCccCCCCCcHHH
Confidence 469999999999999999999999999999999999866 45899999997643 34567999999998888899999
Q ss_pred HHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCH
Q 000562 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1419)
Q Consensus 922 ~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~ 1001 (1419)
++.+... . ..++.+.++++.+++.+..+..+ ..||||||||++||++|+.+|++++|||||+|||+
T Consensus 101 nl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkqrl~laraL~~~p~lllLDEPt~~LD~ 166 (257)
T PRK11247 101 NVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQRVALARALIHRPGLLLLDEPLGALDA 166 (257)
T ss_pred HHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCH
Confidence 9987421 0 12345788999999987766543 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1002 RAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1002 ~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
.++..+.+.|+++++ .|+|||+++|+++ .+.+.+|++++|.+ |++++.|+.
T Consensus 167 ~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 167 LTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 999999999999865 4899999999976 46678999999985 799988874
No 195
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-35 Score=334.19 Aligned_cols=206 Identities=23% Similarity=0.262 Sum_probs=171.0
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc---c-ccceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~d~~~~~ 916 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.... . .+..++|++|++.+++.
T Consensus 17 ~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 17 GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 4579999999999999999999999999999999999866 4689999999875431 1 23358999999999999
Q ss_pred ccHHHHHHHHhhhcCC----------C--CCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHh
Q 000562 917 LTVLESLLFSAWLRLP----------S--EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV 984 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~----------~--~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~ 984 (1419)
+||+||+.+....... . .....+..+.+++.++.+++.+..+..+ +.||||||||++||++|+
T Consensus 95 ~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al~ 169 (255)
T PRK11300 95 MTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQA-----GNLAYGQQRRLEIARCMV 169 (255)
T ss_pred CcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCCh-----hhCCHHHHHHHHHHHHHh
Confidence 9999999986431110 0 0011123356788899999987666553 479999999999999999
Q ss_pred hCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 985 ANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 985 ~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+..
T Consensus 170 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 239 (255)
T PRK11300 170 TQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDRIYVVNQ-GTPLANGTPE 239 (255)
T ss_pred cCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEecCCHH
Confidence 999999999999999999999999999999875 899999999976 56788999999985 7999998853
No 196
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=325.09 Aligned_cols=201 Identities=20% Similarity=0.309 Sum_probs=167.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-------CceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1419)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|. +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999998765 9999999998765432 2569999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1419)
++.+||+||+.+.....+... .+.+..++++++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 889999999988643221000 001224677899999987766654
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 380 (1419)
+.|||||||||+||+|++.+|++++|||||+|||+.++.++.+.|+++++. ++++|+.++|+.+++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeCCHHHHHh-hCEEEE
Confidence 469999999999999999999999999999999999999999999988653 34666678888888766 589999
Q ss_pred EcCCeEEEEcCh
Q 000562 381 LSEGQIVYQGPR 392 (1419)
Q Consensus 381 L~~G~iv~~G~~ 392 (1419)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998864
No 197
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=7.8e-35 Score=327.48 Aligned_cols=204 Identities=21% Similarity=0.342 Sum_probs=172.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1419)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 36999999999999999999999999999999999998775 9999999988754332 2469999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
+||+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 90 ~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 132 (232)
T cd03218 90 LTVEENILAVLEIRGLSK----------------------------------KEREEKLEELLEEFHITHLRKSKAS--- 132 (232)
T ss_pred CcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCChh---
Confidence 999999987543211000 0012245778899999877666554
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.+++|+|++|++
T Consensus 133 --~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tii~~sH~~~~~~~~~d~i~~l~~ 208 (232)
T cd03218 133 --SLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDR--GIGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 69999999999999999999999999999999999999999999988752 45677788999999999999999999
Q ss_pred CeEEEEcChhhH
Q 000562 384 GQIVYQGPRVSV 395 (1419)
Q Consensus 384 G~iv~~G~~~~~ 395 (1419)
|++++.|+.+++
T Consensus 209 G~i~~~~~~~~~ 220 (232)
T cd03218 209 GKVLAEGTPEEI 220 (232)
T ss_pred CeEEEEeCHHHh
Confidence 999999988765
No 198
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-35 Score=338.41 Aligned_cols=201 Identities=25% Similarity=0.322 Sum_probs=170.2
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-------ccccceEEEEccCCC-C
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDI-H 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~d~-~ 913 (1419)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQ 97 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhceEEEEeChhhh
Confidence 469999999999999999999999999999999999876 468999999987532 234567999999863 2
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+..+||+|++.|....+ ....++..++++++++.++|. +..+..+ +.||||||||++||++|+.+|++|+|
T Consensus 98 ~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~LSgGq~qrl~laral~~~p~lLlL 169 (287)
T PRK13641 98 LFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSP-----FELSGGQMRRVAIAGVMAYEPEILCL 169 (287)
T ss_pred hccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 33589999998865432 123344456788999999996 5666553 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.++..+.+.|++++++|.|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 170 DEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 229 (287)
T PRK13641 170 DEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-GKLIKHASP 229 (287)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999877999999999976 47788999999985 799999875
No 199
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.4e-35 Score=373.65 Aligned_cols=206 Identities=26% Similarity=0.392 Sum_probs=165.7
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1419)
++|+|+|++++||+.++|+||||||||||+++|+|.+ |. +|+|.+||+++++... ++.++||+|++++|. .|
T Consensus 364 ~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~T 438 (588)
T PRK11174 364 TLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-GT 438 (588)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-cC
Confidence 5999999999999999999999999999999999999 65 8999999999987654 578999999998665 59
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
++|||.++.. ....+.+.++++. +. .+.. .-.|++..||.||+. ..
T Consensus 439 I~eNI~~g~~----~~~~eei~~al~~------------------a~---------l~~~--i~~lp~G~dT~vge~-G~ 484 (588)
T PRK11174 439 LRDNVLLGNP----DASDEQLQQALEN------------------AW---------VSEF--LPLLPQGLDTPIGDQ-AA 484 (588)
T ss_pred HHHHhhcCCC----CCCHHHHHHHHHH------------------hC---------HHHH--HHhcccccccccccC-CC
Confidence 9999988631 1111111111111 00 1111 224677889999976 45
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
+||||||||++||||++++|+||+||||||+||+.++.+|.+.|+++.+ ++|+| .++|.. +..+.+|+|++|++|+
T Consensus 485 ~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~--~~TvI-iItHrl-~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 485 GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASR--RQTTL-MVTHQL-EDLAQWDQIWVMQDGQ 560 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhC--CCEEE-EEecCh-HHHHhCCEEEEEeCCe
Confidence 7999999999999999999999999999999999999999999998743 34544 466665 4557799999999999
Q ss_pred EEEEcChhhHHH
Q 000562 386 IVYQGPRVSVLD 397 (1419)
Q Consensus 386 iv~~G~~~~~~~ 397 (1419)
++..|+++++.+
T Consensus 561 i~e~G~~~eL~~ 572 (588)
T PRK11174 561 IVQQGDYAELSQ 572 (588)
T ss_pred EeecCCHHHHHh
Confidence 999999998864
No 200
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=6.5e-35 Score=325.63 Aligned_cols=195 Identities=27% Similarity=0.397 Sum_probs=164.0
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc---c---cc-ceEEEEccCCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T---FA-RISGYCEQNDIHS 914 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~---~~-~~~gyv~Q~d~~~ 914 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . ++ +.++|++|++.++
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 95 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLL 95 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccC
Confidence 569999999999999999999999999999999999866 4689999999875321 1 22 5699999999888
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDE 994 (1419)
+.+|++|++.+....+. ....+..+.+.++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||
T Consensus 96 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDE 167 (221)
T TIGR02211 96 PDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SELSGGERQRVAIARALVNQPSLVLADE 167 (221)
T ss_pred CCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 89999999988654331 122333456788999999987766543 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEE
Q 000562 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELI 1049 (1419)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~ 1049 (1419)
||+|||+.++..+.+.|++++++ |+|||+++|+++ .+ +.+|++++|++ |+++
T Consensus 168 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i~ 220 (221)
T TIGR02211 168 PTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQLF 220 (221)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEec
Confidence 99999999999999999999764 899999999976 34 55799999985 6664
No 201
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=8.3e-35 Score=322.89 Aligned_cols=199 Identities=31% Similarity=0.413 Sum_probs=168.3
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCHH
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTVR 227 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 227 (1419)
++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 14 TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 5999999999999999999999999999999999998775 9999999998754332 35799999999888899999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000562 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1419)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1419)
||+.++....+.. . .+....++.+++.+||++..+..++ .|
T Consensus 91 ~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~L 131 (213)
T cd03301 91 DNIAFGLKLRKVP--K--------------------------------DEIDERVREVAELLQIEHLLDRKPK-----QL 131 (213)
T ss_pred HHHHHHHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCHHHHhCChh-----hC
Confidence 9998764322100 0 0012246778899999877776654 59
Q ss_pred ChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 000562 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1419)
Q Consensus 308 SGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv 387 (1419)
|||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|+|++|++|+++
T Consensus 132 S~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~ 210 (213)
T cd03301 132 SGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRL-GTTTIYVTHDQVEAMTMADRIAVMNDGQIQ 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999987533 456667889999999999999999999999
Q ss_pred EEc
Q 000562 388 YQG 390 (1419)
Q Consensus 388 ~~G 390 (1419)
+.|
T Consensus 211 ~~g 213 (213)
T cd03301 211 QIG 213 (213)
T ss_pred ecC
Confidence 876
No 202
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.9e-35 Score=339.34 Aligned_cols=205 Identities=26% Similarity=0.379 Sum_probs=176.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1419)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999998876 999999998875422 2467999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+||+.|.+...+... .+....++.+++.+||++..|+.++
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 132 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG----- 132 (301)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchh-----
Confidence 9999988655432110 0012246778999999988877665
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
.|||||||||+||+||+++|++++|||||+|||+.++.++.+.+++++. + ++|+.++|..+++.++||+|++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 133 QLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK--D-KTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC--C-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998853 3 667779999999999999999999999
Q ss_pred EEEEcChhhHHH
Q 000562 386 IVYQGPRVSVLD 397 (1419)
Q Consensus 386 iv~~G~~~~~~~ 397 (1419)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998754
No 203
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=8.5e-35 Score=324.01 Aligned_cols=198 Identities=29% Similarity=0.448 Sum_probs=167.0
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCCH
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMTV 226 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 226 (1419)
++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999998775 999999998875421 24679999999988888999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1419)
+||+.+.....+... .+....++++++.+||++..+..++ .
T Consensus 96 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 136 (218)
T cd03266 96 RENLEYFAGLYGLKG----------------------------------DELTARLEELADRLGMEELLDRRVG-----G 136 (218)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhhhhh-----h
Confidence 999987543221100 0012246778999999877766554 5
Q ss_pred CChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000562 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1419)
Q Consensus 307 LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 386 (1419)
||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++... +.+++.++|+..++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRAL--GKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998642 45677788999999999999999999999
Q ss_pred EEEc
Q 000562 387 VYQG 390 (1419)
Q Consensus 387 v~~G 390 (1419)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 204
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=337.38 Aligned_cols=201 Identities=26% Similarity=0.361 Sum_probs=171.1
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCC-----cccccceEEEEccCCC-CCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR-----QETFARISGYCEQNDI-HSP 915 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~-----~~~~~~~~gyv~Q~d~-~~~ 915 (1419)
+.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.. ...+++.+||++|++. ...
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 96 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLF 96 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhc
Confidence 469999999999999999999999999999999999876 46899999998763 1234567999999874 234
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
..||+|++.+..... ..+..+..+.++++++.++|.+..+... +.||||||||++||++|+.+|++|+||||
T Consensus 97 ~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~~qrl~laraL~~~p~lLilDEP 168 (283)
T PRK13636 97 SASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPT-----HCLSFGQKKRVAIAGVLVMEPKVLVLDEP 168 (283)
T ss_pred cccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 679999998864322 2233444567899999999988777653 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 169 t~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i~~~g~~ 226 (283)
T PRK13636 169 TAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRVILQGNP 226 (283)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999865 899999999976 46678999999986 799999986
No 205
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-35 Score=347.54 Aligned_cols=203 Identities=24% Similarity=0.300 Sum_probs=174.9
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc---c----ccceEEEEccCCC
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T----FARISGYCEQNDI 912 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~d~ 912 (1419)
+...+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.+||++|++.
T Consensus 39 ~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 39 GLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 44568999999999999999999999999999999999876 4689999999876421 1 2357999999999
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+++++||+||+.|....+. ...++..+.++++++.++|.+..+..+ +.||||||||++|||+|+.+|++|+|
T Consensus 117 l~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLL 188 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLM 188 (400)
T ss_pred CCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999998765432 223444567889999999988777654 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.++..+++.|+++++ .|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 189 DEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 189 DEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999975 4899999999986 57788999999985 799998875
No 206
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.2e-34 Score=339.56 Aligned_cols=204 Identities=23% Similarity=0.275 Sum_probs=172.8
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEEEccCC--C
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--I 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d--~ 912 (1419)
...+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++||+|++ .
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 3579999999999999999999999999999999999876 458999999987642 12456799999997 5
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ill 991 (1419)
++|.+||.|++.+......+ ..+.++.++.+.++++.++|. +..+.. +..||||||||++||+||+.+|++|+
T Consensus 111 l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p~~LSgG~~QRv~iArAL~~~P~lli 184 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----PHEFSGGQCQRIGIARALILEPKLII 184 (331)
T ss_pred cCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 78899999999886543221 234455566788999999994 344443 45899999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+||||+|||..++..+++.|+++.++ |.|||++|||++ .+.+.+|++++|.+ |+++..|+.
T Consensus 185 lDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~-G~ive~g~~ 246 (331)
T PRK15079 185 CDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL-GHAVELGTY 246 (331)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 99999999999999999999999765 899999999976 46678999999985 799999985
No 207
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-35 Score=330.06 Aligned_cols=201 Identities=21% Similarity=0.319 Sum_probs=168.5
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc----cccceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d~~~~~ 916 (1419)
.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.
T Consensus 17 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 17 KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 3569999999999999999999999999999999999866 4689999999875431 235679999999988899
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHc-CCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELV-ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l-~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
+||+||+.+..... ......+.++++++.+ ++.+..+.. +..||||||||++||++|+.+|+|++||||
T Consensus 95 ~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~illlDEP 164 (237)
T PRK11614 95 MTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMSGGEQQMLAIGRALMSQPRLLLLDEP 164 (237)
T ss_pred CcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCCHHHHHHHHHHHHHHhCCCEEEEcCc
Confidence 99999998764221 1122234466777777 466555443 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+..
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 222 (237)
T PRK11614 165 SLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVLEDTGD 222 (237)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEeeCCHH
Confidence 9999999999999999999877999999999976 57788999999985 7999999853
No 208
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.6e-34 Score=338.69 Aligned_cols=213 Identities=20% Similarity=0.258 Sum_probs=176.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-------CceEEEEccCC--
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQD-- 218 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d-- 218 (1419)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++....+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 469999999999999999999999999999999999997642348999999998865432 24799999997
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccc
Q 000562 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1419)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1419)
.+.+.+||.+++.+......... . .+...++.++++.+||++..++
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~~~---------~------------------------~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKGMS---------K------------------------AEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCC---------H------------------------HHHHHHHHHHHHHcCCCChHHH-
Confidence 67889999999976543221000 0 0112246778899999764332
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
+ +.....|||||||||+||+||+.+|++|++||||+|||..++.+|.+.|+++.+.. +++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF-NTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEECCHHHHHHhCCEE
Confidence 2 35667899999999999999999999999999999999999999999999987643 567778999999999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000562 379 ILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1419)
++|++|++++.|+.+++.
T Consensus 233 ~vm~~G~ive~g~~~~i~ 250 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVF 250 (330)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999998875
No 209
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=337.93 Aligned_cols=200 Identities=22% Similarity=0.346 Sum_probs=169.4
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-------ccccceEEEEccCC--C
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND--I 912 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~d--~ 912 (1419)
+.+|+|||++|++||++||+|+||||||||+++|+|..+ +..|+|.++|.++.. ..+++.+|||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQ 97 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhheEEEecChHhc
Confidence 469999999999999999999999999999999999876 468999999987632 23566899999986 3
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ill 991 (1419)
+++ .||+|++.|..... .....+..++++++++.+||. +..++. +..||||||||++||++|+.+|+||+
T Consensus 98 l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgGq~qrv~laraL~~~p~ill 168 (286)
T PRK13646 98 LFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----PFQMSGGQMRKIAIVSILAMNPDIIV 168 (286)
T ss_pred cch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHHHHhCCCEEE
Confidence 444 59999999875432 223344556788999999996 565554 35799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 169 lDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~-G~i~~~g~~ 230 (286)
T PRK13646 169 LDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE-GSIVSQTSP 230 (286)
T ss_pred EECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999999999975 4899999999976 46788999999985 799999985
No 210
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-35 Score=337.29 Aligned_cols=200 Identities=27% Similarity=0.368 Sum_probs=169.8
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-------ccccceEEEEccCCC-CC
Q 000562 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDI-HS 914 (1419)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~d~-~~ 914 (1419)
.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++. .+
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l 97 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQL 97 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECccccccccHHHHHhhEEEEecCcchhc
Confidence 59999999999999999999999999999999999876 468999999987631 234667999999862 33
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
...||.|++.|+.... ..+..+.++++.++++.++|. +..+.. +..||||||||++||++|+.+|++|+||
T Consensus 98 ~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~~LSgGqkqrvaiA~aL~~~p~illLD 169 (288)
T PRK13643 98 FEETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----PFELSGGQMRRVAIAGILAMEPEVLVLD 169 (288)
T ss_pred ccchHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----cccCCHHHHHHHHHHHHHHhCCCEEEEE
Confidence 3469999999875432 223445566788999999995 455543 4579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 170 EPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G~i~~~g~~ 228 (288)
T PRK13643 170 EPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-GHIISCGTP 228 (288)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999877999999999986 46688999999985 899999986
No 211
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-35 Score=340.80 Aligned_cols=218 Identities=22% Similarity=0.317 Sum_probs=177.2
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccC
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1419)
.+.++|+++.++.. ......+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~--------~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEK--------QENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 36677776665310 0012459999999999999999999999999999999999876 4689999999765
Q ss_pred Cc-------------------ccccceEEEEccCC--CCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc
Q 000562 896 RQ-------------------ETFARISGYCEQND--IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT 954 (1419)
Q Consensus 896 ~~-------------------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~ 954 (1419)
.. ...++.+|||+|++ .+++ .||+||+.|+.... ....++..++++++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 23457899999986 3444 59999998875322 223344456788999999996
Q ss_pred -cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHH
Q 000562 955 -SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIF 1033 (1419)
Q Consensus 955 -~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~ 1033 (1419)
+..+.. +..||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455543 3579999999999999999999999999999999999999999999999877999999999976 466
Q ss_pred HhcCeEEEEecCCEEEEeCCC
Q 000562 1034 ESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1034 ~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+.+|++++|++ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999985 799999985
No 212
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=345.38 Aligned_cols=206 Identities=20% Similarity=0.279 Sum_probs=175.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-------CceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1419)
..+|+|+|+++++||+++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++||+|++.+
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 46899999999999999999999999999999999999876 9999999998865432 2479999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1419)
++++||+||+.|+....+... . +....++++++.+||++..++.+
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~----------~------------------------~~~~~~~e~L~~~gL~~~~~~~~- 162 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINA----------E------------------------ERREKALDALRQVGLENYAHSYP- 162 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------H------------------------HHHHHHHHHHHHcCCChhhhcCc-
Confidence 999999999998754332110 0 01124677899999987776655
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 380 (1419)
+.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+.. +++|+.++|+.+++.+++|+|++
T Consensus 163 ----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~-g~TIIivTHd~~~~~~~~Dri~v 237 (400)
T PRK10070 163 ----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKH-QRTIVFISHDLDEAMRIGDRIAI 237 (400)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHC-CCeEEEEECCHHHHHHhCCEEEE
Confidence 4699999999999999999999999999999999999999999999986543 45667789999999999999999
Q ss_pred EcCCeEEEEcChhhHH
Q 000562 381 LSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1419)
|++|+++..|+++++.
T Consensus 238 L~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 238 MQNGEVVQVGTPDEIL 253 (400)
T ss_pred EECCEEEecCCHHHHH
Confidence 9999999999988764
No 213
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=9.4e-35 Score=329.28 Aligned_cols=208 Identities=21% Similarity=0.277 Sum_probs=168.6
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc---cc-cceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---TF-ARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~-~~~~gyv~Q~d~~~~~ 916 (1419)
++.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.... .. +..++|++|++.+++.
T Consensus 12 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (243)
T TIGR01978 12 DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQYPEEIPG 91 (243)
T ss_pred CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeeccccccCC
Confidence 4579999999999999999999999999999999999841114689999999875431 22 2348999999999999
Q ss_pred ccHHHHHHHHhhhcCCC----CCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 000562 917 LTVLESLLFSAWLRLPS----EIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~----~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ill 991 (1419)
+|++|++.+........ .....+..+.++++++.+++. +..+..++ ..||||||||++||++|+.+|++++
T Consensus 92 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrl~la~al~~~p~lll 167 (243)
T TIGR01978 92 VSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EGFSGGEKKRNEILQMALLEPKLAI 167 (243)
T ss_pred cCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cCcCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999998764322110 112223345678899999997 34454321 2499999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHh-cCeEEEEecCCEEEEeCCC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+... +|++++|++ |++++.|+.
T Consensus 168 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G~i~~~g~~ 229 (243)
T TIGR01978 168 LDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-GRIVKSGDV 229 (243)
T ss_pred ecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-CEEEEecCH
Confidence 99999999999999999999999877999999999986 45555 799999985 799998875
No 214
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7e-35 Score=325.15 Aligned_cols=203 Identities=29% Similarity=0.415 Sum_probs=171.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1419)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 46999999999999999999999999999999999998775 999999998875321 2456999999998888999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+||+.+.....+... . +....++++++.+||++..++.++
T Consensus 92 v~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~----- 132 (220)
T cd03263 92 VREHLRFYARLKGLPK----------S------------------------EIKEEVELLLRVLGLTDKANKRAR----- 132 (220)
T ss_pred HHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCCHHHHhChhh-----
Confidence 9999987644322100 0 011235678889999877776654
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
.|||||||||+||++++.+|++++|||||+|||+.++.++.+.|+++++ + ++++.++|+..++.+++|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998864 3 667778899999999999999999999
Q ss_pred EEEEcChhhH
Q 000562 386 IVYQGPRVSV 395 (1419)
Q Consensus 386 iv~~G~~~~~ 395 (1419)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999987654
No 215
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=337.10 Aligned_cols=216 Identities=22% Similarity=0.387 Sum_probs=173.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC-------------------CCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------------------VPP 208 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-------------------~~~ 208 (1419)
.++|+|||++|++|++++|+||||||||||+++|+|.+++. +|+|+++|+++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35999999999999999999999999999999999999876 99999999887542 114
Q ss_pred ceEEEEccCC--CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHH
Q 000562 209 RTSAYVSQQD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIM 286 (1419)
Q Consensus 209 ~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l 286 (1419)
+.++||+|++ .++ ..||+||+.|+....+.. . .+...++++++
T Consensus 116 ~~ig~v~Q~~~~~l~-~~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l 160 (320)
T PRK13631 116 RRVSMVFQFPEYQLF-KDTIEKDIMFGPVALGVK-K---------------------------------SEAKKLAKFYL 160 (320)
T ss_pred hcEEEEEECchhccc-cchHHHHHHhhHHhcCCC-H---------------------------------HHHHHHHHHHH
Confidence 6799999986 445 469999998864321110 0 00122466788
Q ss_pred HHhCCc-ccccccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEe
Q 000562 287 KILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLL 365 (1419)
Q Consensus 287 ~~lgL~-~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~ 365 (1419)
+.+||+ +..++ .+..|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++... +++|++++
T Consensus 161 ~~~gL~~~~~~~-----~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~--g~Tiiivt 233 (320)
T PRK13631 161 NKMGLDDSYLER-----SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKAN--NKTVFVIT 233 (320)
T ss_pred HHcCCChhHhcC-----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHC--CCEEEEEe
Confidence 999996 34443 34579999999999999999999999999999999999999999999988642 56677789
Q ss_pred cChhHHHhhcCeEEEEcCCeEEEEcChhhHH---HHHHhCCCCCCC
Q 000562 366 QPAPEAYELFDDVILLSEGQIVYQGPRVSVL---DFFASMGFSCPK 408 (1419)
Q Consensus 366 q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~---~~F~~~G~~~p~ 408 (1419)
|+..++...+|+|++|++|++++.|+++++. ..++..|..+|.
T Consensus 234 Hd~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 234 HTMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred cCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 9999999999999999999999999998764 233445555443
No 216
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=9.1e-35 Score=330.88 Aligned_cols=203 Identities=25% Similarity=0.332 Sum_probs=172.0
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc----------------ccccceE
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----------------ETFARIS 904 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~~~ 904 (1419)
++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.++.. ..+++.+
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 12 ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 3569999999999999999999999999999999999876 468999999986532 1245679
Q ss_pred EEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHh
Q 000562 905 GYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV 984 (1419)
Q Consensus 905 gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~ 984 (1419)
+|++|++.+++..|+.||+.+...... ........+.++++++.+++.+..+.. +..||||||||++||++|+
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~laral~ 162 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVL--GMARAEAEKRAMELLDMVGLADKADHM-----PAQLSGGQQQRVAIARALA 162 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCChhHhhcC-----hhhcCHHHHHHHHHHHHHH
Confidence 999999999999999999987542111 122334455678999999998776654 3579999999999999999
Q ss_pred hCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 985 ANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 985 ~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
.+|++++|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++...+|++++|++ |+++..|+.
T Consensus 163 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 163 MRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVCFFDK-GRIVEQGKP 231 (252)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999765 899999999986 46678999999985 799998874
No 217
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=9.8e-34 Score=319.71 Aligned_cols=193 Identities=25% Similarity=0.319 Sum_probs=144.5
Q ss_pred eeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHHHHHHHhh
Q 000562 849 TGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAW 928 (1419)
Q Consensus 849 s~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~ 928 (1419)
.+.|..||+++++||||-||||+.++|||..+ +.+|+ .. .-.++|-||--.-....||++.|.-...
T Consensus 361 ~G~i~~gEvigilGpNgiGKTTFvk~LAG~ik--Pdeg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~~~~~ 427 (591)
T COG1245 361 EGEIYDGEVIGILGPNGIGKTTFVKLLAGVIK--PDEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLRSAIR 427 (591)
T ss_pred CCeeecceEEEEECCCCcchHHHHHHHhcccc--CCCCC----Cc-------cceEeecceeecCCCCCcHHHHHHHhhh
Confidence 46788999999999999999999999999766 34565 11 1246888886444467899998864332
Q ss_pred hcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHH
Q 000562 929 LRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVM 1008 (1419)
Q Consensus 929 lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~ 1008 (1419)
-+... .-...|+++-|.|..+.+..+ .+|||||.|||+||.+|..++++.+||||++.||.+.+..+-
T Consensus 428 ~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~va 495 (591)
T COG1245 428 SAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVA 495 (591)
T ss_pred hhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHH
Confidence 21111 123467888899998888765 479999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEe----CCCCCchhHHHHHHHhcCCC
Q 000562 1009 RTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA----GPLGSKSCELIKYFEAVEGV 1071 (1419)
Q Consensus 1009 ~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~----G~~~~~~~~~~~~f~~~~g~ 1071 (1419)
+.||+.... ++|.+++-||.-+ +--..||++|.. |+---+ +|. ...+.+-.|...+ |+
T Consensus 496 kvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~--GePg~~g~a~~P~-~mr~GMN~FLk~l-~v 558 (591)
T COG1245 496 KVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE--GEPGKHGHASPPM-SMREGMNRFLKNL-GV 558 (591)
T ss_pred HHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe--cCCCccCcCCCCc-cHHHHHHHHHHHc-Cc
Confidence 999999854 7899999999753 334579998886 332222 232 2233455566666 44
No 218
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-35 Score=329.37 Aligned_cols=202 Identities=26% Similarity=0.355 Sum_probs=170.8
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCC---------cccccceEEEEccCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR---------QETFARISGYCEQND 911 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~---------~~~~~~~~gyv~Q~d 911 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. ....++.++|++|++
T Consensus 14 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~ 91 (242)
T PRK11124 14 AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQY 91 (242)
T ss_pred CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecccccccchhhHHHHHhheEEEecCc
Confidence 3569999999999999999999999999999999999876 46899999998642 112355789999999
Q ss_pred CCCCCccHHHHHHHH-hhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 000562 912 IHSPGLTVLESLLFS-AWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1419)
Q Consensus 912 ~~~~~lTv~E~l~f~-a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~il 990 (1419)
.+++.+|++|++.+. ...+ .....+..+.+.+.++.+|+.+..+..+ ..||||||||++|||+|+.+|+++
T Consensus 92 ~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~~p~ll 163 (242)
T PRK11124 92 NLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP-----LHLSGGQQQRVAIARALMMEPQVL 163 (242)
T ss_pred cccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999753 2222 1122333456788999999987766653 479999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 164 ilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 225 (242)
T PRK11124 164 LFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-GHIVEQGDA 225 (242)
T ss_pred EEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999877999999999986 46678999999985 799999875
No 219
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-33 Score=332.04 Aligned_cols=213 Identities=28% Similarity=0.485 Sum_probs=177.8
Q ss_pred ccceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECC
Q 000562 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG 892 (1419)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g 892 (1419)
.++.+..+|+++..+ +++++++|+|++++||+.+||+|+||||||||+++|+|..+ +.+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~--~~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLA--PTQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECC
Confidence 355666667766653 23379999999999999999999999999999999999877 4689999999
Q ss_pred ccCC---cccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccC------CcccC
Q 000562 893 YPKR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSG------ALIGL 963 (1419)
Q Consensus 893 ~~~~---~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~------~~~g~ 963 (1419)
.+.. ...+++.++||+|++.+++. |++||+.++. + +.+ ++.+.++++..++.+..+ +.+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~g-TireNi~l~~----~-~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFAG-TIRENILLAR----P-DAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCccccc-cHHHHhhccC----C-cCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8754 46788999999999988765 9999998752 2 222 234677888888766544 44554
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000562 964 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1419)
Q Consensus 964 ~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1043 (1419)
+.++|||||+|||++||||+.+++++++||||++||.++++.|++.|.++++ ++||+++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 3568999999999999999999999999999999999999999999999986 599999999964 567889999998
Q ss_pred cCCEEEEeCCC
Q 000562 1044 RGGELIYAGPL 1054 (1419)
Q Consensus 1044 ~gG~~~~~G~~ 1054 (1419)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 5 799999975
No 220
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=336.35 Aligned_cols=205 Identities=25% Similarity=0.358 Sum_probs=169.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC----------------------
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF---------------------- 205 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~---------------------- 205 (1419)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+....
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999876 89999998754210
Q ss_pred -----CCCceEEEEccCC-CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchh
Q 000562 206 -----VPPRTSAYVSQQD-WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTS 279 (1419)
Q Consensus 206 -----~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~ 279 (1419)
..++.++||+|++ ..+...||+|||.|+....+... .+..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------------------------------HHHH
Confidence 1135799999985 34556899999998654322100 0112
Q ss_pred HHHHHHHHHhCCc-ccccccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCC
Q 000562 280 LVVEYIMKILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDG 358 (1419)
Q Consensus 280 ~~~~~~l~~lgL~-~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~ 358 (1419)
.+++.+++.+||+ +..++.+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~~-----~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRSP-----FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 2467889999996 5555544 46999999999999999999999999999999999999999999999874 2 5
Q ss_pred eEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChhhHH
Q 000562 359 TTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 359 t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~ 396 (1419)
++|+.++|+.+++.+.+|+|++|++|++++.|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 66777999999999999999999999999999998864
No 221
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-35 Score=335.16 Aligned_cols=200 Identities=25% Similarity=0.335 Sum_probs=170.9
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc----ccccceEEEEccCCC-CCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDI-HSPG 916 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d~-~~~~ 916 (1419)
+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++. .+..
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 459999999999999999999999999999999999866 468999999987642 234567999999975 3567
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
.|++||+.|..... .....+..+.++++++.+++.+..+..+ ..||+|||||++||++|+.+|+||+|||||
T Consensus 93 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt 164 (274)
T PRK13644 93 RTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSGGQGQCVALAGILTMEPECLIFDEVT 164 (274)
T ss_pred chHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 89999998865432 1233444566889999999988777653 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|||+.++..+.+.|++++++|+|||+++|+++ ++ +.+|++++|++ |++++.|+.
T Consensus 165 ~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~g~~ 219 (274)
T PRK13644 165 SMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLEGEP 219 (274)
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999877999999999986 34 67999999985 799999985
No 222
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=329.72 Aligned_cols=205 Identities=25% Similarity=0.307 Sum_probs=169.9
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc---eEEEEEEECCccCCc---ccccceEEEEccCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ---ETFARISGYCEQNDIHS 914 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~ 914 (1419)
+..+|+|+|+++++||+++|+||||||||||+++|+|..+.. +.+|+|.++|.++.. ..+++.+||++|++.++
T Consensus 15 ~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~ 94 (250)
T PRK14247 15 QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPI 94 (250)
T ss_pred CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccC
Confidence 356999999999999999999999999999999999986421 358999999987542 23456799999999888
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccc----cCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL----SGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~----~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~il 990 (1419)
+.+||+||+.+....+.. .....+..+.++++++.+++.+. .+.. +..||||||||++|||+|+.+|+++
T Consensus 95 ~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~ll 168 (250)
T PRK14247 95 PNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP-----AGKLSGGQQQRLCIARALAFQPEVL 168 (250)
T ss_pred CCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 899999999886543211 11223344567889999998542 2332 4579999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|||||+|||+.++..+.+.|+++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 169 lLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 229 (250)
T PRK14247 169 LADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-GQIVEWGPT 229 (250)
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-CeEEEECCH
Confidence 99999999999999999999999864 899999999986 46678999999985 799998875
No 223
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1e-34 Score=328.63 Aligned_cols=204 Identities=24% Similarity=0.335 Sum_probs=170.6
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc----cccceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d~~~~~ 916 (1419)
++.+|+|+|+++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.
T Consensus 14 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 14 GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 3579999999999999999999999999999999999865 4689999999875421 123469999999999999
Q ss_pred ccHHHHHHHHhhhcCC--C---CCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 000562 917 LTVLESLLFSAWLRLP--S---EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~--~---~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ill 991 (1419)
+||+||+.+....... . ....+..++.++++++.+++.+..+..+ +.||||||||++||++|+.+|++|+
T Consensus 92 ~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Ge~qrv~laral~~~p~~ll 166 (242)
T TIGR03411 92 LTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----GLLSHGQKQWLEIGMLLMQDPKLLL 166 (242)
T ss_pred CCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999886432100 0 0112234456889999999987766554 4799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 167 lDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~~~~~~~~ 226 (242)
T TIGR03411 167 LDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GSVLAEGSL 226 (242)
T ss_pred ecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEeeCCH
Confidence 9999999999999999999999876 799999999976 46678999999985 789988875
No 224
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=7.6e-35 Score=326.41 Aligned_cols=203 Identities=23% Similarity=0.323 Sum_probs=168.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCc-----CCCCCeeeEEEECCccCCCCC-----CCceEEEEccCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL-----GHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQD 218 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l-----~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d 218 (1419)
++|+|+|+++++||+++|+||||||||||+++|+|.+ ++. +|+|.++|+++.... .++.++|++|++
T Consensus 14 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 14 HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 5999999999999999999999999999999999998 554 999999999875432 245799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccc
Q 000562 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1419)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1419)
.++ .+||+||+.++....+... + . +....++++++.+||.+..+..
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~~~~--~-------~------------------------~~~~~~~~~l~~~~l~~~~~~~ 136 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHGIKL--K-------E------------------------ELDERVEEALRKAALWDEVKDR 136 (227)
T ss_pred hhc-cccHHHHHHhHHHhcCCCc--H-------H------------------------HHHHHHHHHHHHcCCChHHhcc
Confidence 877 8999999988654321100 0 0 0122356788999998766554
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
+. +..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+.+++.+++|++
T Consensus 137 ~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i 210 (227)
T cd03260 137 LH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADRT 210 (227)
T ss_pred CC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCEE
Confidence 31 357999999999999999999999999999999999999999999999865 2 66777889999999999999
Q ss_pred EEEcCCeEEEEcChhh
Q 000562 379 ILLSEGQIVYQGPRVS 394 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~ 394 (1419)
++|++|++++.|++++
T Consensus 211 ~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 211 AFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEeCCEEEEecCccc
Confidence 9999999999998764
No 225
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-35 Score=331.84 Aligned_cols=202 Identities=27% Similarity=0.400 Sum_probs=170.7
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGL 917 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~l 917 (1419)
++.+|+|+|+++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+
T Consensus 14 ~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 14 GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 4569999999999999999999999999999999999865 468999999986532 23446799999998887889
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHh------hCCCcce
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV------ANPSIVF 991 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~------~~p~ill 991 (1419)
||+|++.+...... ...+..++.++++++.+++.+..+..+ ..||||||||++||++|+ .+|++|+
T Consensus 92 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe~qrv~la~al~~~~~~~~~p~lll 163 (258)
T PRK13548 92 TVEEVVAMGRAPHG---LSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGEQQRVQLARVLAQLWEPDGPPRWLL 163 (258)
T ss_pred CHHHHHHhhhcccC---CCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhcccccCCCCCEEE
Confidence 99999987543211 112233456788999999987776654 479999999999999999 5999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHH-hcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIV-NTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||||+|||+.++..+.+.|++++ ++|+|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 164 LDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 225 (258)
T PRK13548 164 LDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-GRLVADGTP 225 (258)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-CEEEeeCCH
Confidence 999999999999999999999997 67899999999976 46678999999985 799988875
No 226
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.8e-35 Score=321.87 Aligned_cols=198 Identities=25% Similarity=0.373 Sum_probs=167.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1419)
+.+|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 35999999999999999999999999999999999998775 9999999987654 2356799999999888889999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000562 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1419)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1419)
||+.+.....+... .+....++++++.+||++..++.++ .|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRVE-----EL 129 (210)
T ss_pred HHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcHh-----hC
Confidence 99987543321100 0012236778899999877776554 69
Q ss_pred ChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 000562 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1419)
Q Consensus 308 SGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv 387 (1419)
||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++. +.+|+.++|+..++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~--~~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARA--GKTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999988653 456777889999999999999999999998
Q ss_pred EEc
Q 000562 388 YQG 390 (1419)
Q Consensus 388 ~~G 390 (1419)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 764
No 227
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-34 Score=317.09 Aligned_cols=183 Identities=46% Similarity=0.768 Sum_probs=155.8
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC--CCCceEEEEccCCCCCCC
Q 000562 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~ 223 (1419)
.++.+|+|+|+.+++||+++|+||||||||||+++|+|.+++..+.+|+|.++|+++... ..++.++|++|++.+++.
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 97 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPT 97 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCC
Confidence 345799999999999999999999999999999999999874324599999999987653 234679999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
+||+||+.++.+.. . +..
T Consensus 98 ~tv~~~l~~~~~~~---------------------------------------------------------~-----~~~ 115 (202)
T cd03233 98 LTVRETLDFALRCK---------------------------------------------------------G-----NEF 115 (202)
T ss_pred CcHHHHHhhhhhhc---------------------------------------------------------c-----ccc
Confidence 99999998743210 1 123
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
...||||||||++||+||+.+|++++|||||+|||+.++..+.+.++++++..+.+++++++|+.+++.+.+|++++|++
T Consensus 116 ~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~ 195 (202)
T cd03233 116 VRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE 195 (202)
T ss_pred hhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC
Confidence 34699999999999999999999999999999999999999999999987643456677777778899999999999999
Q ss_pred CeEEEEc
Q 000562 384 GQIVYQG 390 (1419)
Q Consensus 384 G~iv~~G 390 (1419)
|++++.|
T Consensus 196 G~i~~~g 202 (202)
T cd03233 196 GRQIYYG 202 (202)
T ss_pred CEEEecC
Confidence 9998765
No 228
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.2e-34 Score=323.78 Aligned_cols=202 Identities=26% Similarity=0.409 Sum_probs=168.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1419)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 36999999999999999999999999999999999999775 9999999988765432 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHh-CCcccccccccCc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL-GLDTCADTLVGDE 302 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 302 (1419)
+|++||+.++..... . . +....++.+++.+ ++++..++.+
T Consensus 90 ~t~~~~l~~~~~~~~--~--~--------------------------------~~~~~~~~~l~~~~~l~~~~~~~~--- 130 (222)
T cd03224 90 LTVEENLLLGAYARR--R--A--------------------------------KRKARLERVYELFPRLKERRKQLA--- 130 (222)
T ss_pred CcHHHHHHHHhhhcC--c--h--------------------------------hHHHHHHHHHHHHHhhhhhhhCch---
Confidence 999999988643221 0 0 0011234556666 4666556554
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|++++. .+++|+.++|+..++.+++|+|++|+
T Consensus 131 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~ 206 (222)
T cd03224 131 --GTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD--EGVTILLVEQNARFALEIADRAYVLE 206 (222)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhccEEEEee
Confidence 46999999999999999999999999999999999999999999999865 35667778899999999999999999
Q ss_pred CCeEEEEcChhhH
Q 000562 383 EGQIVYQGPRVSV 395 (1419)
Q Consensus 383 ~G~iv~~G~~~~~ 395 (1419)
+|++++.|+.+++
T Consensus 207 ~G~i~~~~~~~~~ 219 (222)
T cd03224 207 RGRVVLEGTAAEL 219 (222)
T ss_pred CCeEEEeCCHHHH
Confidence 9999999988765
No 229
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-35 Score=336.03 Aligned_cols=200 Identities=25% Similarity=0.328 Sum_probs=171.7
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCC-CCCCc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~-~~~~l 917 (1419)
+.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++. .++..
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 359999999999999999999999999999999999876 468999999987642 234567999999973 66788
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
||+||+.|..... ....++..+.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||||+
T Consensus 98 tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~ 169 (279)
T PRK13650 98 TVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSGGQKQRVAIAGAVAMRPKIIILDEATS 169 (279)
T ss_pred cHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcc
Confidence 9999999875432 2334445567899999999988777654 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+.++..+++.|++++++ |+|||+++|+++ ++ ..+|++++|.+ |+++..|+.
T Consensus 170 ~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~~g~~ 224 (279)
T PRK13650 170 MLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVESTSTP 224 (279)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEEECCH
Confidence 99999999999999999875 999999999976 34 67999999985 799999885
No 230
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1e-34 Score=342.99 Aligned_cols=205 Identities=22% Similarity=0.309 Sum_probs=176.4
Q ss_pred ccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCcc----CCc---cc---c-cceEEEE
Q 000562 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP----KRQ---ET---F-ARISGYC 907 (1419)
Q Consensus 839 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~----~~~---~~---~-~~~~gyv 907 (1419)
++...+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+ ... .. . ++.++|+
T Consensus 34 ~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 34 TGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred hCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 456779999999999999999999999999999999999876 568999999962 211 11 1 2579999
Q ss_pred ccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000562 908 EQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1419)
Q Consensus 908 ~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p 987 (1419)
+|++.++|.+||+||+.|+...+. ....+.++.++++++.+||.+..+... ..||||||||++|||+|+.+|
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g---~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P 183 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQG---MPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDA 183 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999998865432 234455667899999999988877654 479999999999999999999
Q ss_pred CcceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 988 ~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
+||+|||||+|||+.++..+++.|+++.++ |+|||++|||++ ++.+.+|++++|++ |+++..|+..
T Consensus 184 ~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 184 DILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred CEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 999999999999999999999999999765 899999999986 57788999999985 7999999863
No 231
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=333.47 Aligned_cols=206 Identities=21% Similarity=0.290 Sum_probs=170.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC-------CCceEEEEccCC-C
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQD-W 219 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d-~ 219 (1419)
+++|+|||++|++||+++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 35999999999999999999999999999999999999876 999999999875421 245799999985 2
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc-cccccc
Q 000562 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1419)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1419)
.+...||.||+.|+....+.. . .+....++++++.+||. +..++.
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKMN----------L------------------------DEVKNYAHRLLMDLGFSRDVMSQS 142 (286)
T ss_pred ccchhhHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 333469999998864321110 0 00122467789999996 555554
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
+ +.|||||||||+|||||+.+|++++|||||+|||+.++.++.+.++++... .+++|+.++|+.+++.+++|+|
T Consensus 143 ~-----~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 143 P-----FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred c-----ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEE
Confidence 4 569999999999999999999999999999999999999999999998653 3567777999999999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000562 379 ILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1419)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 217 IVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999988764
No 232
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-35 Score=322.62 Aligned_cols=194 Identities=27% Similarity=0.371 Sum_probs=163.9
Q ss_pred ceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-ccccceEEEEccCCCCCCCccHHHHHHH
Q 000562 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTVLESLLF 925 (1419)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f 925 (1419)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999876 468999999987543 1234679999999998899999999987
Q ss_pred HhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHH
Q 000562 926 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 1005 (1419)
Q Consensus 926 ~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~ 1005 (1419)
....+.. . .+..++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++++|||||+|||+.++.
T Consensus 94 ~~~~~~~--~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGLK--L-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred ccccccC--c-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 5432211 1 1233456789999999987776653 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 1006 IVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 1006 ~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
.+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 999999999754 899999999976 46678999999985 7887654
No 233
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-34 Score=327.42 Aligned_cols=213 Identities=27% Similarity=0.395 Sum_probs=172.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1419)
.++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 36999999999999999999999999999999999998765 899999999876543 135799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+.+||+||+.++..... .... . ..+..+ ......++.+++.+||++..++.+
T Consensus 91 ~~~tv~~~l~~~~~~~~--~~~~---~------~~~~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~-- 142 (241)
T cd03256 91 ERLSVLENVLSGRLGRR--STWR---S------LFGLFP---------------KEEKQRALAALERVGLLDKAYQRA-- 142 (241)
T ss_pred ccCcHHHHHHhhhcccc--hhhh---h------hcccCc---------------HHHHHHHHHHHHHcCChhhhCCCc--
Confidence 99999999987532110 0000 0 000000 001234667889999987666544
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|
T Consensus 143 ---~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 143 ---DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREE-GITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999987533 456777889999999999999999
Q ss_pred cCCeEEEEcChhhH
Q 000562 382 SEGQIVYQGPRVSV 395 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1419)
++|++++.|+++++
T Consensus 219 ~~G~i~~~~~~~~~ 232 (241)
T cd03256 219 KDGRIVFDGPPAEL 232 (241)
T ss_pred ECCEEEeecCHHHh
Confidence 99999999998775
No 234
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.5e-34 Score=341.76 Aligned_cols=207 Identities=23% Similarity=0.289 Sum_probs=175.7
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCc----cCCCCCC-------CceEEEEc
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGH----GFKEFVP-------PRTSAYVS 215 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~----~~~~~~~-------~~~~~yv~ 215 (1419)
...+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|. ++..... ++.++||+
T Consensus 36 ~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 36 LVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 457999999999999999999999999999999999999876 999999996 3332211 24799999
Q ss_pred cCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccc
Q 000562 216 QQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 295 (1419)
Q Consensus 216 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 295 (1419)
|++.+++.+||+||+.|+....+... .+.+..++++++.+||++..
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~~ 158 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQWA 158 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhh
Confidence 99999999999999998754332110 00122467789999998877
Q ss_pred cccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhc
Q 000562 296 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 375 (1419)
Q Consensus 296 dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 375 (1419)
|+.++ .|||||||||+|||||+.+|+||+|||||+|||+.++.++.+.|+++.+.. +++|+.++|+..++.+++
T Consensus 159 ~~~~~-----~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~-~~TII~iTHdl~e~~~l~ 232 (382)
T TIGR03415 159 DKKPG-----ELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKL-NKTIIFVSHDLDEALKIG 232 (382)
T ss_pred cCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhC
Confidence 76654 599999999999999999999999999999999999999999999987643 456677999999999999
Q ss_pred CeEEEEcCCeEEEEcChhhHH
Q 000562 376 DDVILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 376 D~vilL~~G~iv~~G~~~~~~ 396 (1419)
|+|++|++|+++..|+++++.
T Consensus 233 DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 233 NRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CEEEEEECCEEEEecCHHHHh
Confidence 999999999999999998874
No 235
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-35 Score=318.97 Aligned_cols=222 Identities=23% Similarity=0.333 Sum_probs=194.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-------CceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1419)
..-++|+|+.++.||+..|||=||||||||+++|.++.+|+ +|+|.++|.++..... ++.+++|+|+-.+
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaL 117 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFAL 117 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcc
Confidence 45789999999999999999999999999999999999876 9999999998876543 3689999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1419)
+|+.||.||..|+.+.+|.+.. +.+.+..+.|+..||+...|..+
T Consensus 118 lPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~yp- 162 (386)
T COG4175 118 LPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKYP- 162 (386)
T ss_pred ccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcCc-
Confidence 9999999999999998876521 12335678899999999888665
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 380 (1419)
..||||+||||.|||||..+|+||+||||+|+|||--+.++.+.|.++...++ +||+.++|+.+|++.+.|||.+
T Consensus 163 ----~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~-KTIvFitHDLdEAlriG~rIai 237 (386)
T COG4175 163 ----NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLK-KTIVFITHDLDEALRIGDRIAI 237 (386)
T ss_pred ----ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhC-CeEEEEecCHHHHHhccceEEE
Confidence 46999999999999999999999999999999999999999999999887765 4566799999999999999999
Q ss_pred EcCCeEEEEcChhhHHHHHHhCCCCCCCCCChHHHHHHhc
Q 000562 381 LSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVT 420 (1419)
Q Consensus 381 L~~G~iv~~G~~~~~~~~F~~~G~~~p~~~~~adfl~~v~ 420 (1419)
|.+|+|+..|+++|++. .|.+.-+++|..++.
T Consensus 238 mkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v~ 269 (386)
T COG4175 238 MKDGEIVQVGTPEEILL--------NPANDYVRDFVRNVD 269 (386)
T ss_pred ecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcCC
Confidence 99999999999999974 466656677776553
No 236
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=329.86 Aligned_cols=209 Identities=25% Similarity=0.266 Sum_probs=169.3
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc---eEEEEEEECCccCC-----cccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR-----QETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~~~~-----~~~~~~~~gyv~Q~d~ 912 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++. ...+++.++|++|++.
T Consensus 16 ~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 95 (253)
T PRK14267 16 SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPN 95 (253)
T ss_pred CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCc
Confidence 346999999999999999999999999999999999986532 35899999998763 1234567999999999
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+++.+||+||+.+....+.. ....+...+.++++++.+++........ ...+..||||||||++||++|+.+|++++|
T Consensus 96 ~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~llll 173 (253)
T PRK14267 96 PFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRL-NDYPSNLSGGQRQRLVIARALAMKPKILLM 173 (253)
T ss_pred cCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhh-ccChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999886543311 1122333456788899988853211111 112457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 174 DEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 232 (253)
T PRK14267 174 DEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLYL-GKLIEVGPT 232 (253)
T ss_pred cCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999865 799999999986 46778999999985 799999885
No 237
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.1e-34 Score=325.18 Aligned_cols=198 Identities=26% Similarity=0.354 Sum_probs=166.5
Q ss_pred eeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHHHHH
Q 000562 845 LVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLL 924 (1419)
Q Consensus 845 L~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~ 924 (1419)
|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+||+|++.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999876 46899999998764321 12489999999999999999998
Q ss_pred HHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHH
Q 000562 925 FSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAA 1004 (1419)
Q Consensus 925 f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~ 1004 (1419)
+......+ .....+.++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 76321111 2223344556788999999987766653 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1005 AIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1005 ~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998765 899999999986 57788999999985 788888764
No 238
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.1e-34 Score=325.94 Aligned_cols=200 Identities=28% Similarity=0.349 Sum_probs=167.0
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc----cccceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d~~~~~ 916 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 12 QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 4579999999999999999999999999999999999876 4689999999875421 124579999999999999
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcC-CccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVE-LTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~-l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
+|++|++.+....+.. . ..+..+++++.++ +.+..+.. ++.||||||||++||++|+.+|++++||||
T Consensus 90 ~tv~~~l~~~~~~~~~---~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~illlDEP 158 (230)
T TIGR03410 90 LTVEENLLTGLAALPR---R---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGGQQQQLAIARALVTRPKLLLLDEP 158 (230)
T ss_pred CcHHHHHHHHHHhcCc---c---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 9999999886543211 1 1233567777776 45555544 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+ |+++..|+..
T Consensus 159 t~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 217 (230)
T TIGR03410 159 TEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVASGAGD 217 (230)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 9999999999999999998864 899999999976 46668999999985 7999999864
No 239
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-34 Score=326.23 Aligned_cols=206 Identities=28% Similarity=0.393 Sum_probs=171.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
..+|+|+|+.+++|++++|+|||||||||||++|+|.+++. +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 35999999999999999999999999999999999998775 8999999988754332 35789999999989899
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcc--cccccccCc
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT--CADTLVGDE 302 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~ 302 (1419)
||+||+.++....+... .+....++++++.+||++ ..++.
T Consensus 91 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~~~---- 132 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFADRY---- 132 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHhcC----
Confidence 99999987643221100 001223567889999985 44544
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
++.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.+++|+|++|+
T Consensus 133 -~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 133 -PHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQE-LGKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 4569999999999999999999999999999999999999999999998753 24667778899999999999999999
Q ss_pred CCeEEEEcChhhHH
Q 000562 383 EGQIVYQGPRVSVL 396 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1419)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999887653
No 240
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=331.09 Aligned_cols=203 Identities=28% Similarity=0.305 Sum_probs=170.7
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCC-CCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDW-QVAEM 224 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 224 (1419)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++..
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 5999999999999999999999999999999999999775 9999999998764332 357999999963 45678
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||+||+.|+....+... .+.+..++.+++.+||.+..++.+.
T Consensus 96 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~~---- 137 (274)
T PRK13647 96 TVWDDVAFGPVNMGLDK----------------------------------DEVERRVEEALKAVRMWDFRDKPPY---- 137 (274)
T ss_pred cHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCChh----
Confidence 99999988643211100 0012246778999999877776654
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
.|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|++++.. +++|+.++|+.+++.+.+|+|++|++|
T Consensus 138 -~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 138 -HLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQ--GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred -hCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 59999999999999999999999999999999999999999999998753 566777899999999999999999999
Q ss_pred eEEEEcChhhH
Q 000562 385 QIVYQGPRVSV 395 (1419)
Q Consensus 385 ~iv~~G~~~~~ 395 (1419)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998654
No 241
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=329.77 Aligned_cols=202 Identities=27% Similarity=0.320 Sum_probs=167.5
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC---ceEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
++.+|+|+|++|++||++||+|+||||||||+++|+|..+. .+.+|+|.++|.+... ..+++.++|++|++.
T Consensus 24 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 103 (258)
T PRK14268 24 EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPN 103 (258)
T ss_pred CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCc
Confidence 35699999999999999999999999999999999997652 1358999999987532 134567999999988
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ 988 (1419)
+++ +|++||+.+....+ ....++.++.++++++.+++.+ ..+.. +..||||||||++|||+|+.+|+
T Consensus 104 ~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~ 174 (258)
T PRK14268 104 PFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP-----ALSLSGGQQQRLCIARTLAVKPK 174 (258)
T ss_pred cCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----hhhCCHHHHHHHHHHHHHHcCCC
Confidence 877 89999999875432 1223334456788999998843 23332 45799999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+++|||||+|||+.++..+.+.|+++++ |+|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 175 llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 237 (258)
T PRK14268 175 IILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFLM-GELIEFGQT 237 (258)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999864 899999999976 46678999999985 799999875
No 242
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-34 Score=335.00 Aligned_cols=213 Identities=19% Similarity=0.230 Sum_probs=173.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCC-CeeeEEEECCccCCCCCC-------CceEEEEccCC-
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL-QVSGKITYNGHGFKEFVP-------PRTSAYVSQQD- 218 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~-~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 218 (1419)
.++|+|||++|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999986422 358999999998765432 13699999997
Q ss_pred -CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccc
Q 000562 219 -WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1419)
Q Consensus 219 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 297 (1419)
.+.+.+||.+++........... ..+....++++++.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~~---------------------------------~~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGGN---------------------------------KKTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHCCCCChHH-
Confidence 47888999999876443210000 0011234678899999975211
Q ss_pred cccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000562 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1419)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 377 (1419)
+-+.....|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+.. +.+++.++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~-g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKE-NMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCE
Confidence 1123456799999999999999999999999999999999999999999999987643 56677799999999999999
Q ss_pred EEEEcCCeEEEEcChhhHH
Q 000562 378 VILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1419)
|++|++|++++.|+.+++.
T Consensus 224 i~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998874
No 243
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.5e-34 Score=319.55 Aligned_cols=195 Identities=25% Similarity=0.408 Sum_probs=165.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC-CCCceEEEEccCCCCCCCCCH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-VPPRTSAYVSQQDWQVAEMTV 226 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV 226 (1419)
.++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 36999999999999999999999999999999999998765 99999999876532 124579999999988889999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1419)
+||+.+.....+. .+..++.+++.+||++..++.++ .
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~ 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKVK-----G 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhHh-----h
Confidence 9999875432110 01235677889999877766554 5
Q ss_pred CChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000562 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1419)
Q Consensus 307 LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 386 (1419)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++++ . +.+++.++|+..++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-Q-GITVLISSHLLSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998875 3 45666788999999999999999999999
Q ss_pred EEEc
Q 000562 387 VYQG 390 (1419)
Q Consensus 387 v~~G 390 (1419)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 244
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=330.86 Aligned_cols=206 Identities=26% Similarity=0.389 Sum_probs=171.8
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGL 917 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~l 917 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|+..+++.+
T Consensus 14 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 14 TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 4579999999999999999999999999999999999865 468999999986532 23455799999998888889
Q ss_pred cHHHHHHHHhhhcCC-CCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 918 TVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
|+.|++.++...... .........+.++++++.+++.+..++.. ..||||||||++||++|+.+|++|+|||||
T Consensus 92 tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP~ 166 (255)
T PRK11231 92 TVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGGQRQRAFLAMVLAQDTPVVLLDEPT 166 (255)
T ss_pred cHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999875311000 01111223456788999999987776653 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++..|+.+
T Consensus 167 ~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 223 (255)
T PRK11231 167 TYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQGTPE 223 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEcCHH
Confidence 999999999999999999877999999999986 57788999999985 7899988764
No 245
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=332.97 Aligned_cols=202 Identities=25% Similarity=0.335 Sum_probs=169.5
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-----ccccceEEEEccCCCC-C
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH-S 914 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~-~ 914 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.. .
T Consensus 13 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 13 DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 3569999999999999999999999999999999999876 468999999987531 1345679999998753 3
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDE 994 (1419)
...|+.|++.+....+ ....++..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||
T Consensus 91 ~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~laraL~~~p~lllLDE 162 (271)
T PRK13638 91 FYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLSHGQKKRVAIAGALVLQARYLLLDE 162 (271)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 4568999998764332 1223334456788999999987776643 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 163 Pt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 220 (271)
T PRK13638 163 PTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILTHGAP 220 (271)
T ss_pred CcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999877999999999976 46678999999985 799999875
No 246
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=333.28 Aligned_cols=200 Identities=28% Similarity=0.338 Sum_probs=171.3
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCC-CCCCc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~-~~~~l 917 (1419)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .++..
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~ 97 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGA 97 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccc
Confidence 459999999999999999999999999999999999876 468999999987643 234567999999973 56678
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
||+||+.+..... ....++..+.++++++.++|.+..+..+ ..||||||||++||++|+.+|+||+|||||+
T Consensus 98 tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt~ 169 (279)
T PRK13635 98 TVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSGGQKQRVAIAGVLALQPDIIILDEATS 169 (279)
T ss_pred cHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998865433 1233444567899999999988777654 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+.++..+++.|++++++ |+|||+++|+++. + ..+|++++|.+ |++++.|+.
T Consensus 170 gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~-~-~~~d~i~~l~~-G~i~~~g~~ 224 (279)
T PRK13635 170 MLDPRGRREVLETVRQLKEQKGITVLSITHDLDE-A-AQADRVIVMNK-GEILEEGTP 224 (279)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH-H-HcCCEEEEEEC-CEEEEECCH
Confidence 99999999999999999876 8999999999763 4 46999999985 799999985
No 247
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.7e-34 Score=343.85 Aligned_cols=209 Identities=27% Similarity=0.420 Sum_probs=176.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
+++|+|+|+.+++||+++|+||||||||||||+|+|.++|. +|+|.++|+++..... ++.++||+|++.+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999875 9999999998765432 46799999999888999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||+||+.++..... + .+.. . ..+...+++++++.+||.+..|+.+
T Consensus 93 tv~e~v~~~~~~~~-~-~~~~-------------~---------------~~~~~~~v~~~le~vgl~~~~~~~~----- 137 (402)
T PRK09536 93 DVRQVVEMGRTPHR-S-RFDT-------------W---------------TETDRAAVERAMERTGVAQFADRPV----- 137 (402)
T ss_pred CHHHHHHhccchhc-c-cccC-------------C---------------CHHHHHHHHHHHHHcCCchhhcCCh-----
Confidence 99999988532110 0 0000 0 0011235788999999988777665
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
+.|||||||||.|||||+.+|++|+|||||+|||+.++.++.+.|+++++ . +++|+.++|+.+++.++||++++|++|
T Consensus 138 ~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 138 TSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLAARYCDELVLLADG 215 (402)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999975 3 456777899999999999999999999
Q ss_pred eEEEEcChhhHH
Q 000562 385 QIVYQGPRVSVL 396 (1419)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1419)
++++.|+++++.
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999998764
No 248
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.2e-34 Score=319.54 Aligned_cols=192 Identities=30% Similarity=0.352 Sum_probs=161.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCC-CCCCCCH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDW-QVAEMTV 226 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 226 (1419)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 36999999999999999999999999999999999998775 9999999988754333467999999973 3457899
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1419)
+||+.++....+ . ....++++++.+||++..++.++ .
T Consensus 90 ~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~ 126 (205)
T cd03226 90 REELLLGLKELD--A------------------------------------GNEQAETVLKDLDLYALKERHPL-----S 126 (205)
T ss_pred HHHHhhhhhhcC--c------------------------------------cHHHHHHHHHHcCCchhcCCCch-----h
Confidence 999987532110 0 01235678899999887776654 6
Q ss_pred CChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000562 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1419)
Q Consensus 307 LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 386 (1419)
||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++. +.+++.++|+..++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQ--GKAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998653 45677788999999999999999999997
Q ss_pred E
Q 000562 387 V 387 (1419)
Q Consensus 387 v 387 (1419)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 249
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-34 Score=319.11 Aligned_cols=215 Identities=22% Similarity=0.310 Sum_probs=179.4
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcC-C-CCCeeeEEEECCccCCCCCC-------CceEEEEccC
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG-H-HLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQ 217 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~-~-~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~ 217 (1419)
...+++|||+.+++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++-.+.. .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999997 4 34568999999997755432 2589999999
Q ss_pred C--CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccc
Q 000562 218 D--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 295 (1419)
Q Consensus 218 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 295 (1419)
+ .+-|.+||.+.+.-..+...... ..++...++.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 6 57788999988865443211000 0112344577889999998642
Q ss_pred cccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhc
Q 000562 296 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 375 (1419)
Q Consensus 296 dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 375 (1419)
. +-+.+...|||||||||.||.||+.+|++|+.|||||+||..++.+|++.|+++.++ .+++++.++|+..-+.++|
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e-~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQRE-KGTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhc
Confidence 1 335677889999999999999999999999999999999999999999999999874 4778888999999999999
Q ss_pred CeEEEEcCCeEEEEcChhhHH
Q 000562 376 DDVILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 376 D~vilL~~G~iv~~G~~~~~~ 396 (1419)
|+|+||+.|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999874
No 250
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=332.17 Aligned_cols=206 Identities=29% Similarity=0.400 Sum_probs=171.2
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGL 917 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~l 917 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+
T Consensus 23 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 23 GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 3579999999999999999999999999999999999865 468999999986532 23456799999998888899
Q ss_pred cHHHHHHHHhhhcCC-CCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 918 TVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
|+.|++.+....... .........+.++++++.+++.+..+..+ ..||||||||++||++|+.+|+||+|||||
T Consensus 101 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~lllLDEPt 175 (265)
T PRK10575 101 TVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSGGERQRAWIAMLVAQDSRCLLLDEPT 175 (265)
T ss_pred cHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999875321110 00111223456788999999987666654 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |+++..|+..
T Consensus 176 ~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 233 (265)
T PRK10575 176 SALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIAQGTPA 233 (265)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecCHH
Confidence 999999999999999999765 899999999986 56788999999985 7899988753
No 251
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.2e-34 Score=323.99 Aligned_cols=202 Identities=28% Similarity=0.409 Sum_probs=169.4
Q ss_pred ccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEc-cCCCCCC
Q 000562 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCE-QNDIHSP 915 (1419)
Q Consensus 839 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~d~~~~ 915 (1419)
++.+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++ |++.+++
T Consensus 31 ~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 31 YREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred cCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 345679999999999999999999999999999999999866 468999999986432 23456799997 5566778
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
.+|++|++.+....+. ...++..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++++||||
T Consensus 109 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP 180 (236)
T cd03267 109 DLPVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEP 180 (236)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 8999999988654432 222334456788999999988777654 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 181 t~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 181 TIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999764 899999999986 46778999999985 7887764
No 252
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=332.47 Aligned_cols=201 Identities=25% Similarity=0.358 Sum_probs=171.1
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCC-CCCCc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~-~~~~l 917 (1419)
..+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++. .+...
T Consensus 17 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 17 KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 359999999999999999999999999999999999866 568999999987543 234567899999963 33467
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
||.|++.+..... ....+...+.++++++.++|.+..+..+ +.||||||||++||++|+.+|++|+|||||+
T Consensus 95 tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrl~laraL~~~p~llilDEPt~ 166 (277)
T PRK13652 95 TVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTA 166 (277)
T ss_pred cHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998765432 2233444556889999999987777654 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+.++..+.+.+++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 167 gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~g~~ 222 (277)
T PRK13652 167 GLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAYGTV 222 (277)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEECCH
Confidence 99999999999999999875 899999999986 56788999999985 799999985
No 253
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=328.91 Aligned_cols=204 Identities=25% Similarity=0.343 Sum_probs=171.1
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCC-CCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDW-QVAEM 224 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 224 (1419)
++|+|+|++|++||+++|+|||||||||||++|+|.++|. +|+|.++|+++..... ++.++|++|++. .++..
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~ 97 (279)
T PRK13635 21 YALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGA 97 (279)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccc
Confidence 5999999999999999999999999999999999999876 9999999998865332 357999999973 57778
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||.|||.++....+... .+....++++++.+||++..++.++
T Consensus 98 tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~---- 139 (279)
T PRK13635 98 TVQDDVAFGLENIGVPR----------------------------------EEMVERVDQALRQVGMEDFLNREPH---- 139 (279)
T ss_pred cHHHHHhhhHhhCCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCcc----
Confidence 99999988643221100 0012246788999999887776654
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++.. .+++|+.++|+.+++. .+|+|++|++|
T Consensus 140 -~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~-~~~tilivsH~~~~~~-~~d~i~~l~~G 216 (279)
T PRK13635 140 -RLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQ-KGITVLSITHDLDEAA-QADRVIVMNKG 216 (279)
T ss_pred -cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc-CCCEEEEEecCHHHHH-cCCEEEEEECC
Confidence 59999999999999999999999999999999999999999999998763 3566666888888886 59999999999
Q ss_pred eEEEEcChhhHH
Q 000562 385 QIVYQGPRVSVL 396 (1419)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1419)
++++.|+.+++.
T Consensus 217 ~i~~~g~~~~~~ 228 (279)
T PRK13635 217 EILEEGTPEEIF 228 (279)
T ss_pred EEEEECCHHHHh
Confidence 999999988765
No 254
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.9e-34 Score=329.36 Aligned_cols=207 Identities=20% Similarity=0.330 Sum_probs=172.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1419)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 35999999999999999999999999999999999998775 999999998875432 135699999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+.+||.||+.+....... .+ .. .....++.+++.+||++..++.++
T Consensus 97 ~~~tv~enl~~~~~~~~~---~~------~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~- 142 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ---LP------AP------------------------LLHSTVMMKLEAVGLRGAAKLMPS- 142 (269)
T ss_pred CCCCHHHHHHHHHHHccC---CC------HH------------------------HHHHHHHHHHHHcCChhhhhCChh-
Confidence 999999999875321100 00 00 011235678899999887776654
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++.. .+++|+.++|+..++.+++|++++|
T Consensus 143 ----~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~v~~l 217 (269)
T PRK11831 143 ----ELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVPEVLSIADHAYIV 217 (269)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhhCEEEEE
Confidence 59999999999999999999999999999999999999999999998653 2456777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|++++.|+++++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999987763
No 255
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.6e-34 Score=327.21 Aligned_cols=213 Identities=24% Similarity=0.348 Sum_probs=171.8
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1419)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 35999999999999999999999999999999999998775 999999998875432 245699999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+.+||+||+.++..... .... .. .+.. ..+....++++++.+||.+..+..+
T Consensus 92 ~~~tv~~~l~~~~~~~~--~~~~---~~------~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 143 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYK--PTWR---SL------LGRF---------------SEEDKERALSALERVGLADKAYQRA-- 143 (243)
T ss_pred ccccHHHHHhhcccccc--cchh---hh------hccc---------------cHHHHHHHHHHHHHcCcHhhhcCCc--
Confidence 99999999987532100 0000 00 0000 0011234677889999987666544
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.+++|++++|
T Consensus 144 ---~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~tH~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 144 ---DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKE-DGITVIINLHQVDLAKKYADRIVGL 219 (243)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEE
Confidence 469999999999999999999999999999999999999999999998653 2456777889999999999999999
Q ss_pred cCCeEEEEcChhhH
Q 000562 382 SEGQIVYQGPRVSV 395 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1419)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999988764
No 256
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=330.70 Aligned_cols=208 Identities=28% Similarity=0.390 Sum_probs=171.7
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc-eEEEEEEECCccCCc--------ccccceEEEEccCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQ--------ETFARISGYCEQND 911 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~--------~~~~~~~gyv~Q~d 911 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+... ...++.++|++|++
T Consensus 16 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~ 95 (262)
T PRK09984 16 QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQF 95 (262)
T ss_pred CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEcccc
Confidence 457999999999999999999999999999999999986532 236999999986532 12345789999999
Q ss_pred CCCCCccHHHHHHHHhhhcCCC-----CCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000562 912 IHSPGLTVLESLLFSAWLRLPS-----EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1419)
Q Consensus 912 ~~~~~lTv~E~l~f~a~lr~~~-----~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~ 986 (1419)
.+++.+|++|++.+......+. ....++.++.++++++.+++.+..+..+ ..||+|||||++|||+|+.+
T Consensus 96 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~ 170 (262)
T PRK09984 96 NLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV-----STLSGGQQQRVAIARALMQQ 170 (262)
T ss_pred ccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc-----cccCHHHHHHHHHHHHHhcC
Confidence 9899999999998753211000 0111233456889999999987766653 47999999999999999999
Q ss_pred CCcceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 987 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+.+.+|++++|.+ |++++.|+..
T Consensus 171 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 171 AKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIVALRQ-GHVFYDGSSQ 238 (262)
T ss_pred CCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999999999999754 899999999986 46788999999985 7899999864
No 257
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=328.72 Aligned_cols=202 Identities=23% Similarity=0.268 Sum_probs=166.2
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc---eEEEEEEECCccCCc-----ccccceEEEEccCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~ 913 (1419)
..+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.++.. ...++.++|++|++.+
T Consensus 20 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 99 (254)
T PRK14273 20 FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNP 99 (254)
T ss_pred ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeecccc
Confidence 46999999999999999999999999999999999976531 248999999987531 2345679999999877
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc----cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCc
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT----SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~----~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~i 989 (1419)
++ +||+||+.+....+.. ......++.++++++.+++. +..++. ++.||||||||++|||+|+.+|++
T Consensus 100 ~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~l 171 (254)
T PRK14273 100 FL-MSIYDNISYGPKIHGT--KDKKKLDEIVEQSLKKSALWNEVKDKLNTN-----ALSLSGGQQQRLCIARTLAIEPNV 171 (254)
T ss_pred cc-CcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHhCCchhhHHHHhCC-----cccCCHHHHHHHHHHHHHHcCCCE
Confidence 74 8999999886543211 12233345678888888873 223332 458999999999999999999999
Q ss_pred ceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+|||||+|||+.++..+++.|++++ +++|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 172 llLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 233 (254)
T PRK14273 172 ILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFLN-GCIEEESST 233 (254)
T ss_pred EEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999996 4799999999986 46678999999985 799999874
No 258
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.9e-34 Score=322.77 Aligned_cols=206 Identities=35% Similarity=0.512 Sum_probs=165.0
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCH
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTV 226 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 226 (1419)
.+++|+|+|+++++||+++|+||||||||||+++|+|.+++..+.+|+|.++|+++.....++.++|++|++.+++.+||
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv 98 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTV 98 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEEeCCCCccCcCCcH
Confidence 35799999999999999999999999999999999999872112499999999887543446789999999998999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHH-HHHHhCCcccccccccCccCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEY-IMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
+||+.|+........... . . ....++. .++.+++++..++.+ +
T Consensus 99 ~enl~~~~~~~~~~~~~~---~-~---------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (226)
T cd03234 99 RETLTYTAILRLPRKSSD---A-I---------------------------RKKRVEDVLLRDLALTRIGGNLV-----K 142 (226)
T ss_pred HHHHHHHHHhhcccccch---H-H---------------------------HHHHHHHHHHHhhcchhhhcccc-----c
Confidence 999998654322110000 0 0 0112333 788888876655544 4
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecCh-hHHHhhcCeEEEEcCC
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA-PEAYELFDDVILLSEG 384 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~-~~~~~~~D~vilL~~G 384 (1419)
.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.++++.+. +. +++.++|+. .++.+++|++++|++|
T Consensus 143 ~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~-~~-tiii~sh~~~~~~~~~~d~i~~l~~G 220 (226)
T cd03234 143 GISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARR-NR-IVILTIHQPRSDLFRLFDRILLLSSG 220 (226)
T ss_pred CcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CC-EEEEEecCCCHHHHHhCCEEEEEeCC
Confidence 69999999999999999999999999999999999999999999988653 44 455566665 6899999999999999
Q ss_pred eEEEEc
Q 000562 385 QIVYQG 390 (1419)
Q Consensus 385 ~iv~~G 390 (1419)
+++++|
T Consensus 221 ~i~~~g 226 (226)
T cd03234 221 EIVYSG 226 (226)
T ss_pred EEEecC
Confidence 999876
No 259
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.7e-34 Score=373.97 Aligned_cols=205 Identities=26% Similarity=0.338 Sum_probs=165.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
+++|+|+|++|+|||.++|+||||||||||+|+|+|.++|. +|+|.+||+++++... ++.++||+|++.+|. .
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-G 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-c
Confidence 46999999999999999999999999999999999999886 9999999999987654 578999999998765 6
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
|++|||.++.. . ..+.+.+++ +.+. .+.. .-.|++..||.+|+. .
T Consensus 542 TI~eNi~~~~~-~----~~e~i~~al------------------~~a~---------l~~~--i~~lp~G~dt~ige~-G 586 (686)
T TIGR03797 542 SIFENIAGGAP-L----TLDEAWEAA------------------RMAG---------LAED--IRAMPMGMHTVISEG-G 586 (686)
T ss_pred cHHHHHhcCCC-C----CHHHHHHHH------------------HHcC---------cHHH--HHhccccccccccCC-C
Confidence 99999987532 0 011111111 1100 0111 123677889999975 4
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
.+||||||||++||||++++|++++||||||+||+.++.+|.+.|++. ++| ++.++|.. +..+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T-~IiItHr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVT-RIVIAHRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCe-EEEEecCh-HHHHcCCEEEEEECC
Confidence 689999999999999999999999999999999999999999999864 344 45566665 445679999999999
Q ss_pred eEEEEcChhhHHH
Q 000562 385 QIVYQGPRVSVLD 397 (1419)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1419)
+++++|+++++.+
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998863
No 260
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=328.18 Aligned_cols=205 Identities=22% Similarity=0.297 Sum_probs=169.3
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc---eEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
+..+|+|+|+++++||++||+||||||||||+++|+|..++. +.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 16 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 95 (258)
T PRK14241 16 SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPN 95 (258)
T ss_pred CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccc
Confidence 356999999999999999999999999999999999976421 258999999987531 234567999999999
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ 988 (1419)
+++.+||+||+.+....+. ....+..++.++++++.+++.. ..+. .+..||||||||++|||+|+.+|+
T Consensus 96 ~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~ 168 (258)
T PRK14241 96 PFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDK-----PGGGLSGGQQQRLCIARAIAVEPD 168 (258)
T ss_pred cCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhC-----CcccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999988754332 1123334556788899998842 2232 245799999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEe-----cCCEEEEeCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPL 1054 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~gG~~~~~G~~ 1054 (1419)
+++|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+ +.|++++.|+.
T Consensus 169 llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 169 VLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFNLEATGKPGRLVEIDDT 237 (258)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccCCCCceEEecCCH
Confidence 9999999999999999999999999864 689999999976 4678899999997 24899999885
No 261
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.5e-34 Score=329.74 Aligned_cols=206 Identities=27% Similarity=0.380 Sum_probs=171.3
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGL 917 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~l 917 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+
T Consensus 13 ~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 13 GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 4579999999999999999999999999999999999866 468999999987542 23345689999998777889
Q ss_pred cHHHHHHHHhhhcCC-CCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 918 TVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
||+|++.+....... ......+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++++|||||
T Consensus 91 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 165 (256)
T TIGR03873 91 TVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGGERQRVHVARALAQEPKLLLLDEPT 165 (256)
T ss_pred CHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCcc
Confidence 999999875311000 00111223456788999999987766654 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
+|||+.+...+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++..|+..
T Consensus 166 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 222 (256)
T TIGR03873 166 NHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAGPPR 222 (256)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEecCHH
Confidence 999999999999999999877899999999987 57788999999985 7899998753
No 262
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=331.41 Aligned_cols=206 Identities=24% Similarity=0.350 Sum_probs=171.8
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGL 917 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~l 917 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+
T Consensus 19 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 19 KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 3569999999999999999999999999999999999876 458999999987532 23345799999999888899
Q ss_pred cHHHHHHHHhhhcCCC-CCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 918 TVLESLLFSAWLRLPS-EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
|++|++.+......+. ....+...+.++++++.+++.+..++.+ +.||||||||++|||+|+.+|++++|||||
T Consensus 97 tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~laral~~~p~llllDEPt 171 (265)
T PRK10253 97 TVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV-----DTLSGGQRQRAWIAMVLAQETAIMLLDEPT 171 (265)
T ss_pred cHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCChHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 9999998753111100 0011223456789999999987766653 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
+|||+.++..+.+.|++++++ |.|||+++|++. ++.+.+|++++|.+ |++++.|+..
T Consensus 172 ~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 229 (265)
T PRK10253 172 TWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVAQGAPK 229 (265)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 999999999999999999864 899999999986 57788999999985 7999999863
No 263
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-34 Score=314.67 Aligned_cols=196 Identities=31% Similarity=0.568 Sum_probs=162.1
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc-eEEEEEEECCcc
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYP 894 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 894 (1419)
.++|+|+++.++.+ .+++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 46788888877532 13467999999999999999999999999999999999986522 568999999987
Q ss_pred CCc--ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHH
Q 000562 895 KRQ--ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTE 972 (1419)
Q Consensus 895 ~~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgG 972 (1419)
... ...++.++|++|++.+++.+||+|++.+.+..+ .+. .+..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~-----~~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNE-----FVRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------ccc-----chhhCCHH
Confidence 643 234667999999999999999999998753211 122 23579999
Q ss_pred HHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEe
Q 000562 973 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA 1051 (1419)
Q Consensus 973 qrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~ 1051 (1419)
||||++||++|+.+|++++|||||+|||+.++..+++.|++++++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 678777766643467788999999985 788876
Q ss_pred C
Q 000562 1052 G 1052 (1419)
Q Consensus 1052 G 1052 (1419)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 264
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3e-34 Score=324.29 Aligned_cols=205 Identities=20% Similarity=0.331 Sum_probs=171.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC-----CCceEEEEccCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQVA 222 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~ 222 (1419)
+++|+|+|+++++||+++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++..++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 35999999999999999999999999999999999998765 999999999875421 2457999999998888
Q ss_pred CCCHHHHHHHhhhh-cCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 223 EMTVRETLDFAGQC-QGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
.+||+||+.++... .+.. . .+....++++++.+||++..|..+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~-- 134 (240)
T PRK09493 91 HLTALENVMFGPLRVRGAS----------K------------------------EEAEKQARELLAKVGLAERAHHYP-- 134 (240)
T ss_pred CCcHHHHHHhHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChHHHhcCh--
Confidence 99999999875321 1100 0 001224577889999987666554
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
+.|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++++. +++++.++|+.+++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l 209 (240)
T PRK09493 135 ---SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEE--GMTMVIVTHEIGFAEKVASRLIFI 209 (240)
T ss_pred ---hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999988642 466777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999987764
No 265
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.9e-34 Score=318.26 Aligned_cols=190 Identities=24% Similarity=0.367 Sum_probs=162.3
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCC---c----ccccceEEEEccCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR---Q----ETFARISGYCEQNDIH 913 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~d~~ 913 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.+
T Consensus 10 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 87 (206)
T TIGR03608 10 DKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFAL 87 (206)
T ss_pred CEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhh
Confidence 4579999999999999999999999999999999999876 46899999998742 1 1245679999999998
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
++.+|++||+.+....+ .....+..+.++++++.+++.+..+..+ ..||+|||||++||++|+.+|++|+||
T Consensus 88 ~~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllD 159 (206)
T TIGR03608 88 IENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILAD 159 (206)
T ss_pred ccCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEe
Confidence 88999999999865432 1223344556889999999987776654 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEE
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1042 (1419)
|||+|||+.+...+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 160 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 160 EPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 999999999999999999999877999999999975 44679999875
No 266
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=5.7e-34 Score=319.69 Aligned_cols=201 Identities=28% Similarity=0.353 Sum_probs=163.2
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC------CCceEEEEccCC--CC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--WQ 220 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 220 (1419)
++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|+++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999998775 999999999876533 245799999998 45
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc-ccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLV 299 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 299 (1419)
++.+||+||+.+.....+.... + + ......+.+++.+||. ...+..+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~-~--------~-----------------------~~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSK-K--------E-----------------------ARKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcH-H--------H-----------------------HHHHHHHHHHHHCCCChhHhhCCc
Confidence 6789999999876432211000 0 0 0011124678888985 4455544
Q ss_pred cCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000562 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1419)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 379 (1419)
..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|+|+
T Consensus 144 -----~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 144 -----HELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEEL-GLTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred -----hhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEE
Confidence 4699999999999999999999999999999999999999999999987532 4566778899999999999999
Q ss_pred EEcCCeEEEEc
Q 000562 380 LLSEGQIVYQG 390 (1419)
Q Consensus 380 lL~~G~iv~~G 390 (1419)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 267
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=332.40 Aligned_cols=200 Identities=27% Similarity=0.357 Sum_probs=167.0
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-------ccccceEEEEccCC--C
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND--I 912 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~d--~ 912 (1419)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++ .
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQ 97 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccCHHHHHhheEEEeeChhhh
Confidence 359999999999999999999999999999999999866 468999999987532 23456799999986 3
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ill 991 (1419)
++ ..||+|++.+...... ...++..+.++++++.++|.+ ..+.. +..||||||||++||++|+.+|++|+
T Consensus 98 ~~-~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lll 168 (280)
T PRK13649 98 LF-EETVLKDVAFGPQNFG---VSQEEAEALAREKLALVGISESLFEKN-----PFELSGGQMRRVAIAGILAMEPKILV 168 (280)
T ss_pred hc-cccHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 44 4699999988653321 223334456788999999963 44443 35799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 169 LDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 229 (280)
T PRK13649 169 LDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-GKLVLSGKP 229 (280)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999877999999999976 46678999999985 799988875
No 268
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-34 Score=313.92 Aligned_cols=173 Identities=62% Similarity=1.002 Sum_probs=151.8
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHH
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 921 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.. ..+++.++|++|++.+++.+|++|
T Consensus 20 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~-~~~~~~i~~~~q~~~~~~~~tv~~ 98 (192)
T cd03232 20 RQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD-KNFQRSTGYVEQQDVHSPNLTVRE 98 (192)
T ss_pred eEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH-HHhhhceEEecccCccccCCcHHH
Confidence 4699999999999999999999999999999999997432246899999998764 345567999999998889999999
Q ss_pred HHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCH
Q 000562 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1419)
Q Consensus 922 ~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~ 1001 (1419)
++.+...++ .||||||||++||++|+.+|++++|||||+|||+
T Consensus 99 ~l~~~~~~~-------------------------------------~LSgGe~qrv~la~al~~~p~vlllDEP~~~LD~ 141 (192)
T cd03232 99 ALRFSALLR-------------------------------------GLSVEQRKRLTIGVELAAKPSILFLDEPTSGLDS 141 (192)
T ss_pred HHHHHHHHh-------------------------------------cCCHHHhHHHHHHHHHhcCCcEEEEeCCCcCCCH
Confidence 998642110 4999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 1002 RAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 1002 ~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
.++..+++.|+++++.|+|||+++|+++.++.+.+|++++|+++|++++.|
T Consensus 142 ~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 142 QAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999987799999999998644677899999998647998875
No 269
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=5.7e-33 Score=357.52 Aligned_cols=123 Identities=25% Similarity=0.360 Sum_probs=102.3
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccc-cCCcccCCCCCCCCHHHHHHHHHHHHHhhCC---Ccce
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANP---SIVF 991 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p---~ill 991 (1419)
.+|+.|++.|...++. .....+.++.+||... .+.. ...||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~~---------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIPK---------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhchh---------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 3789999888654321 1123678899999753 3443 3479999999999999999999 9999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEe-----cCCEEEEeCCC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPL 1054 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~gG~~~~~G~~ 1054 (1419)
|||||+|||+.+...+++.|+++.++|.|||+++|++. ....+|+++.|. +||++++.|+.
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 446899999994 47999999985
No 270
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.8e-34 Score=320.99 Aligned_cols=195 Identities=27% Similarity=0.375 Sum_probs=165.1
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCccc------c-cceEEEEccCCCCCC
Q 000562 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQET------F-ARISGYCEQNDIHSP 915 (1419)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~------~-~~~~gyv~Q~d~~~~ 915 (1419)
.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... . ++.++|++|++.+++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~~ 101 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLIP 101 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccCC
Confidence 59999999999999999999999999999999999866 46899999998754211 1 357999999998889
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
.+|++|++.+....+. ....+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+||||
T Consensus 102 ~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Ge~qrl~la~al~~~p~llllDEP 173 (228)
T PRK10584 102 TLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQLSGGEQQRVALARAFNGRPDVLFADEP 173 (228)
T ss_pred CcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999988654331 122334567889999999987766553 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEE
Q 000562 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIY 1050 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~ 1050 (1419)
|+|||+.+...+.+.|++++++ |.|||+++|+++ .+ +.+|++++|++ |+++.
T Consensus 174 t~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~i~~ 226 (228)
T PRK10584 174 TGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQLQE 226 (228)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEe
Confidence 9999999999999999999764 899999999976 34 56999999985 67764
No 271
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=326.01 Aligned_cols=207 Identities=23% Similarity=0.302 Sum_probs=166.8
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCC---CCceEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK---TGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~---~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
.+.+|+|+|+++++||+++|+|+||||||||+++|+|.. +..+.+|+|.++|.+... ...++.++|++|++.
T Consensus 15 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 15 DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 356999999999999999999999999999999999952 211247999999987642 234567999999988
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+++ .|++||+.+....+.. ...+...+.++++++.+++.+....... ..+..||||||||++|||+|+.+|++++|
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~lllL 170 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLK-ESAFALSGGQQQRLCIARAMAVSPSVLLM 170 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 776 5999999886543311 1122334567889999998642211111 12457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 171 DEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~~~~~~~~ 229 (250)
T PRK14245 171 DEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GEMVEYDDT 229 (250)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CEEEEECCH
Confidence 99999999999999999999985 5899999999986 46788999999985 799999975
No 272
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-34 Score=333.17 Aligned_cols=207 Identities=20% Similarity=0.228 Sum_probs=174.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC------CCceEEEEccCC--C
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--W 219 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~ 219 (1419)
..+|+|||++|++||+++|+|+||||||||+++|+|.+.+. +|+|.++|.++.... .++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 46999999999999999999999999999999999998765 899999999876543 245799999997 5
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcc-ccccc
Q 000562 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTL 298 (1419)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 298 (1419)
+.+.+||.+++........... + .+...++.++++.+||+. ..++.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 151 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSLS---------A------------------------AERREKALAMMAKVGLRPEHYDRY 151 (327)
T ss_pred cCCccCHHHHHHHHHHHccCCC---------H------------------------HHHHHHHHHHHHHCCCChHHhcCC
Confidence 7888999999976543221000 0 011234678899999963 45554
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
+..|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+.. +++++.++|+...+.+++|+|
T Consensus 152 -----p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~-g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 152 -----PHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQEL-GLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred -----CccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEE
Confidence 45699999999999999999999999999999999999999999999987643 566777999999999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000562 379 ILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1419)
++|++|++++.|+.+++.
T Consensus 226 ~vm~~G~ive~g~~~~~~ 243 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIF 243 (327)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999998875
No 273
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.4e-33 Score=313.77 Aligned_cols=196 Identities=20% Similarity=0.292 Sum_probs=148.2
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCC--CCCCCc
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND--IHSPGL 917 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d--~~~~~l 917 (1419)
+.+.++++++|-|.-...+||+||||.||||||++|.|... +..|+..-| .+-.+|+..|.. .+...-
T Consensus 598 gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~--P~~GE~RKn--------hrL~iG~FdQh~~E~L~~Ee 667 (807)
T KOG0066|consen 598 GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLD--PNDGELRKN--------HRLRIGWFDQHANEALNGEE 667 (807)
T ss_pred CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCC--CCcchhhcc--------ceeeeechhhhhHHhhcccc
Confidence 45678899999999999999999999999999999999876 446664322 233578887763 233445
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
|.-|.|.-. . +++.+ .....+-.+||...++++- +..|||||+-||++|.--+..|+||||||||+
T Consensus 668 tp~EyLqr~--F----Nlpyq----~ARK~LG~fGL~sHAHTik----ikdLSGGQKaRValaeLal~~PDvlILDEPTN 733 (807)
T KOG0066|consen 668 TPVEYLQRK--F----NLPYQ----EARKQLGTFGLASHAHTIK----IKDLSGGQKARVALAELALGGPDVLILDEPTN 733 (807)
T ss_pred CHHHHHHHh--c----CCChH----HHHHHhhhhhhhhccceEe----eeecCCcchHHHHHHHHhcCCCCEEEecCCCC
Confidence 666666421 1 12222 2356788889988888763 46799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCCchhHHHH
Q 000562 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIK 1063 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~ 1063 (1419)
+||..+...+-++|++. ...||+++||-+. +.+.-..+.|+.+.|.-...|...+...++++
T Consensus 734 NLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eIdGdFeDYkkEVLd 795 (807)
T KOG0066|consen 734 NLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEIDGDFEDYKKEVLD 795 (807)
T ss_pred CcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhccccHHHHHHHHHH
Confidence 99999999999999886 5689999999764 55666788888877765666765443333333
No 274
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-34 Score=321.75 Aligned_cols=202 Identities=27% Similarity=0.391 Sum_probs=172.7
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc-cccceEEEEccCCCCCCCccH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
.+.+++|+|++++|||+++|+|+||||||||+++|+|..+ +..|+|.++|.+.... ..++.++|++|++..++.+|+
T Consensus 12 ~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 12 GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 3579999999999999999999999999999999999876 4589999999876431 234678999999998889999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+|++.+....+. .......+.++++++.+++.+..+..+ ..||+|||||++||++|+.+|++++|||||+||
T Consensus 90 ~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~gL 161 (232)
T cd03300 90 FENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQRVAIARALVNEPKVLLLDEPLGAL 161 (232)
T ss_pred HHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999988654432 222334456788999999987777654 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 162 D~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 162 DLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999765 899999999975 46788999999985 799888864
No 275
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=5.2e-34 Score=318.40 Aligned_cols=196 Identities=20% Similarity=0.333 Sum_probs=161.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-------CceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1419)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999998775 9999999998765432 1469999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1419)
++.+||+||+.+........ .. +....+.++++.+||++..++.+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS----------VK------------------------EAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhCCh-
Confidence 88999999998754321100 00 01123567888999987666555
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 380 (1419)
..|||||||||+|||+|+.+|++++|||||+|||..++..+.+.|+++++.. +.+|+.++|+..++. .+|++++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNREL-NTSFLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHh-hcCEEEE
Confidence 4699999999999999999999999999999999999999999999987533 455666788887775 4799999
Q ss_pred EcCCeEE
Q 000562 381 LSEGQIV 387 (1419)
Q Consensus 381 L~~G~iv 387 (1419)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 276
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.3e-34 Score=367.34 Aligned_cols=208 Identities=27% Similarity=0.385 Sum_probs=170.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
+++|+|+|++++|||.++|+||||||||||++.|.|.+++. +|+|.+||+++++... ++.++||+|++.+|. .
T Consensus 342 ~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~-~ 417 (567)
T COG1132 342 KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS-G 417 (567)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-c
Confidence 46999999999999999999999999999999999999886 9999999999987754 588999999998776 7
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||+|||.++..- ...+.+.++++.. ..+..+ ..|++++||.||+ ..
T Consensus 418 TI~~NI~~g~~~----at~eei~~a~k~a---------------------------~~~d~I--~~lp~g~dt~vge-~G 463 (567)
T COG1132 418 TIRENIALGRPD----ATDEEIEEALKLA---------------------------NAHEFI--ANLPDGYDTIVGE-RG 463 (567)
T ss_pred cHHHHHhcCCCC----CCHHHHHHHHHHh---------------------------ChHHHH--HhCcccccceecC-CC
Confidence 999999986421 0112222222111 011222 2357789999995 45
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
.+||||||||++||||++.+|++|+||||||+||+.+...|.+.++++.+ ++|+++ +.|..+.+.+ +|+|++|++|
T Consensus 464 ~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT~ii-IaHRlsti~~-aD~IiVl~~G 539 (567)
T COG1132 464 VNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRTTLI-IAHRLSTIKN-ADRIIVLDNG 539 (567)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCEEEE-EeccHhHHHh-CCEEEEEECC
Confidence 57999999999999999999999999999999999999999999997653 456666 7777766655 9999999999
Q ss_pred eEEEEcChhhHHH
Q 000562 385 QIVYQGPRVSVLD 397 (1419)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1419)
+++++|+++++..
T Consensus 540 ~i~e~G~h~eLl~ 552 (567)
T COG1132 540 RIVERGTHEELLA 552 (567)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 277
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=4.9e-34 Score=324.66 Aligned_cols=205 Identities=21% Similarity=0.313 Sum_probs=170.7
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC-----------CCCceEEEEccC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----------VPPRTSAYVSQQ 217 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-----------~~~~~~~yv~Q~ 217 (1419)
++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|+++... ..++.++|++|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 5999999999999999999999999999999999998765 89999999887532 123579999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccc
Q 000562 218 DWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1419)
Q Consensus 218 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 297 (1419)
+.+++.+||+||+.++..... +.. . .+....++.+++.+||++..|+
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~-~~~-----~---------------------------~~~~~~~~~~l~~~gl~~~~~~ 140 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVK-GEP-----K---------------------------EEATARARELLAKVGLAGKETS 140 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhc-CCC-----H---------------------------HHHHHHHHHHHHHcCCcchhhC
Confidence 988889999999987532110 000 0 0012235678889999876665
Q ss_pred cccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000562 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1419)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 377 (1419)
.+ +.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++... +.+|+.++|+..++.+++|+
T Consensus 141 ~~-----~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--~~tvi~~tH~~~~~~~~~d~ 213 (250)
T PRK11264 141 YP-----RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQE--KRTMVIVTHEMSFARDVADR 213 (250)
T ss_pred Ch-----hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHhcCE
Confidence 54 469999999999999999999999999999999999999999999988653 45667788999999999999
Q ss_pred EEEEcCCeEEEEcChhhHH
Q 000562 378 VILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1419)
+++|++|++++.|+.+++.
T Consensus 214 i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 214 AIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999987763
No 278
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.1e-34 Score=328.55 Aligned_cols=203 Identities=24% Similarity=0.341 Sum_probs=169.4
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc------cccceEEEEccCC--C
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQND--I 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~d--~ 912 (1419)
.+.+|+|+|+++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++ .
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 3579999999999999999999999999999999999876 4689999999875421 1356799999986 4
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ill 991 (1419)
+.+.+||+|++.+...... .......++.++++++.+++. +..+.. +..||||||||++||++|+.+|++|+
T Consensus 101 ~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LSgGe~qrv~laral~~~p~ill 173 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKL-----PRQLSGGQLQRINIARALAVKPKLIV 173 (265)
T ss_pred cCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 6678999999977543211 122233445688999999995 555554 34799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||||+|||+.++..+.+.|++++++ |+|||+++|++. .+.+.+|++++|++ |++++.|+.
T Consensus 174 LDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 235 (265)
T TIGR02769 174 LDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-GQIVEECDV 235 (265)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-CEEEEECCH
Confidence 99999999999999999999999865 899999999976 46678999999985 799999885
No 279
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.1e-34 Score=321.47 Aligned_cols=205 Identities=25% Similarity=0.386 Sum_probs=170.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC--CceEEEEccCCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP--PRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 225 (1419)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 36999999999999999999999999999999999998775 9999999988754322 257999999988888999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 91 ~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 131 (236)
T TIGR03864 91 VRQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAERADDKVR----- 131 (236)
T ss_pred HHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCChh-----
Confidence 9999987543221000 0011235678889999877776654
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++.. +++++.++|+.+++. .+|++++|++|+
T Consensus 132 ~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~-~~d~i~~l~~G~ 209 (236)
T TIGR03864 132 ELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQ-GLSVLWATHLVDEIE-ADDRLVVLHRGR 209 (236)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecChhhHh-hCCEEEEEeCCe
Confidence 599999999999999999999999999999999999999999999987533 456667888888886 499999999999
Q ss_pred EEEEcChhhHH
Q 000562 386 IVYQGPRVSVL 396 (1419)
Q Consensus 386 iv~~G~~~~~~ 396 (1419)
+++.|+.+++.
T Consensus 210 i~~~~~~~~~~ 220 (236)
T TIGR03864 210 VLADGAAAELR 220 (236)
T ss_pred EEEeCCHHHHH
Confidence 99999887764
No 280
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.6e-34 Score=341.28 Aligned_cols=194 Identities=27% Similarity=0.399 Sum_probs=168.7
Q ss_pred ceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-------ccccceEEEEccCCCCCCCccH
Q 000562 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++++||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999876 468999999987532 1245679999999999999999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+||+.|+.... ...+.++.++++++.++|.+..+..+ ..||||||||++|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99999865321 12233456889999999988777654 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999865 899999999986 57788999999985 799999875
No 281
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-34 Score=291.79 Aligned_cols=206 Identities=25% Similarity=0.345 Sum_probs=177.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1419)
..+|+|+|+.|.+||.++++||||||||||||+++|...|. .|+|.+||.+++-- ...-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gP--gaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGP--GAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCC--CccceeEeccCccchhhHHH
Confidence 56999999999999999999999999999999999999886 99999999988643 33458999999999999999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000562 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1419)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1419)
||++|+.++.|.++. .+ ..++.+.+..+||++..+..| -.|
T Consensus 93 dNvafgL~l~Gi~k~-------~R---------------------------~~~a~q~l~~VgL~~~~~~~i-----~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA-------QR---------------------------REIAHQMLALVGLEGAEHKYI-----WQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH-------HH---------------------------HHHHHHHHHHhCcccccccce-----Eee
Confidence 999999998876532 11 224677889999998766544 469
Q ss_pred ChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc--CCe
Q 000562 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS--EGQ 385 (1419)
Q Consensus 308 SGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~--~G~ 385 (1419)
||||||||.|||||..+|+.|+||||+.+||.-++.++.+.|-.+.+..+ ..+..++|+.+|+.-+++++++|+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tg-k~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETG-KQVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhC-CeEEEEeccHHHHHhhhheeEEecCCCce
Confidence 99999999999999999999999999999999999999999998887654 455569999999999999999998 589
Q ss_pred EEEEcChhhHHHH
Q 000562 386 IVYQGPRVSVLDF 398 (1419)
Q Consensus 386 iv~~G~~~~~~~~ 398 (1419)
|+..-+.+-...|
T Consensus 213 vv~~~~~df~rR~ 225 (259)
T COG4525 213 VVERLPLDFARRY 225 (259)
T ss_pred eeEecCCCHHHHh
Confidence 9987776644443
No 282
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=359.39 Aligned_cols=209 Identities=22% Similarity=0.332 Sum_probs=175.9
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc----cccceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d~~~~~ 916 (1419)
++.+|+|||+++++||+++|+||||||||||+++|+|..++++.+|+|.++|.+.... ..++.+||++|++.+++.
T Consensus 17 ~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 96 (506)
T PRK13549 17 GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKE 96 (506)
T ss_pred CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCC
Confidence 4579999999999999999999999999999999999865323589999999876432 124569999999988899
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
+||+|++.+....+.......++..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|+||||||||
T Consensus 97 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt 171 (506)
T PRK13549 97 LSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGLGQQQLVEIAKALNKQARLLILDEPT 171 (506)
T ss_pred CcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 999999988654321111122334456889999999987777654 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
+|||+.++..+++.|++++++|.|||+++|+++ .+.+.+|++++|++ |++++.|+..+
T Consensus 172 ~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 229 (506)
T PRK13549 172 ASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGTRPAAG 229 (506)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeeeccccc
Confidence 999999999999999999878999999999976 46678999999985 79999998754
No 283
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=329.83 Aligned_cols=201 Identities=28% Similarity=0.358 Sum_probs=170.1
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-----ccccceEEEEccCCC-CCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HSP 915 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~-~~~ 915 (1419)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 469999999999999999999999999999999999866 458999999987631 124567999999863 334
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
..||+|++.+..... ....++..+.+.++++.++|.+..+..+ +.||||||||+.||++|+.+|++++||||
T Consensus 93 ~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS~Gq~qrv~laral~~~p~llllDEP 164 (275)
T PRK13639 93 APTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLSGGQKKRVAIAGILAMKPEIIVLDEP 164 (275)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 579999998764322 1223344566889999999988877654 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 165 t~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 221 (275)
T PRK13639 165 TSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIKEGTP 221 (275)
T ss_pred CcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999877999999999976 46678999999986 799999885
No 284
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-34 Score=318.14 Aligned_cols=196 Identities=29% Similarity=0.447 Sum_probs=166.2
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC--CCceEEEEccCCCCCCCCCH
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMTV 226 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 226 (1419)
++|+|+|+++++| +++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 14 RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 6999999999999 99999999999999999999998776 999999998775432 24679999999998999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1419)
+||+.+.....+... .+....++.+++.+||++..++.++ .
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (211)
T cd03264 90 REFLDYIAWLKGIPS----------------------------------KEVKARVDEVLELVNLGDRAKKKIG-----S 130 (211)
T ss_pred HHHHHHHHHHhCCCH----------------------------------HHHHHHHHHHHHHCCCHHHHhCchh-----h
Confidence 999987543321100 0012236778899999877776654 5
Q ss_pred CChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000562 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1419)
Q Consensus 307 LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 386 (1419)
|||||||||+|||||+.+|++++|||||+|||+.++.++.+.|++++. + ++++.++|+..++.+++|++++|++|++
T Consensus 131 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i 207 (211)
T cd03264 131 LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKL 207 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998864 3 6677788999999999999999999999
Q ss_pred EEEc
Q 000562 387 VYQG 390 (1419)
Q Consensus 387 v~~G 390 (1419)
++.|
T Consensus 208 ~~~g 211 (211)
T cd03264 208 VFEG 211 (211)
T ss_pred EecC
Confidence 8765
No 285
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4e-34 Score=322.25 Aligned_cols=202 Identities=30% Similarity=0.407 Sum_probs=172.7
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc-cccceEEEEccCCCCCCCccH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
.+.+|+|+|+++.+||+++|+||||||||||+++|+|..+ +..|+|.++|.+.... ..++.++|++|++.+++.+|+
T Consensus 12 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 12 SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 3569999999999999999999999999999999999866 4589999999876432 234679999999988889999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
.||+.+....+. .......+.++++++.+++.+..+... +.||+||+||++||++|+.+|++++|||||+||
T Consensus 90 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~~L 161 (237)
T TIGR00968 90 RDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQRVALARALAVEPQVLLLDEPFGAL 161 (237)
T ss_pred HHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999987654331 122333456788999999987766653 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 162 D~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 162 DAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 999999999999998775 899999999986 46788999999985 799999885
No 286
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-34 Score=326.55 Aligned_cols=205 Identities=26% Similarity=0.352 Sum_probs=169.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC---CCceEEEEccCCC-CCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1419)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999998775 999999999876432 2467999999974 5778
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
+||+||+.++....+.. . .+....++++++.+||++..++.+
T Consensus 99 ~tv~enl~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 140 (271)
T PRK13632 99 ATVEDDIAFGLENKKVP--P--------------------------------KKMKDIIDDLAKKVGMEDYLDKEP---- 140 (271)
T ss_pred ccHHHHHHhHHHHcCCC--H--------------------------------HHHHHHHHHHHHHcCCHHHhhCCc----
Confidence 99999998754321100 0 001224677889999987777665
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
+.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++. ++++|+.++|+..++. .+|++++|++
T Consensus 141 -~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~ 217 (271)
T PRK13632 141 -QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSE 217 (271)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999998753 3456666777777774 7999999999
Q ss_pred CeEEEEcChhhHH
Q 000562 384 GQIVYQGPRVSVL 396 (1419)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1419)
|+++..|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999887753
No 287
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.5e-34 Score=287.59 Aligned_cols=200 Identities=30% Similarity=0.401 Sum_probs=171.4
Q ss_pred cccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-------ccccceEEEEccC
Q 000562 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQN 910 (1419)
Q Consensus 838 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~ 910 (1419)
..+...||++|++.+++||-+||+|||||||||||-+|+|... +.+|+|.+.|++... .-+.+.+|+|+|.
T Consensus 19 ~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQS 96 (228)
T COG4181 19 GEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQS 96 (228)
T ss_pred CCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHHHhhccceeEEEEe
Confidence 3456789999999999999999999999999999999999877 468999999988532 1234689999999
Q ss_pred CCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 000562 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1419)
Q Consensus 911 d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~il 990 (1419)
..+.|++|..||+...+.++.... ....+...+.++.+||.+-.+.+ +.+|||||+|||+||||++..|+||
T Consensus 97 F~Lip~ltAlENV~lPleL~ge~~---~~~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vL 168 (228)
T COG4181 97 FHLIPNLTALENVALPLELRGESS---ADSRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVL 168 (228)
T ss_pred eeccccchhhhhccchhhhcCCcc---ccHHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEE
Confidence 999999999999998877775322 22334567889999998776655 3489999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEE
Q 000562 991 FMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIY 1050 (1419)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~ 1050 (1419)
|.||||-+||..+...|.+.+-.+.+ .|.|.|++||||+ +...|||.+-|.. |+++.
T Consensus 169 fADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~~ 226 (228)
T COG4181 169 FADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLVE 226 (228)
T ss_pred eccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceecc
Confidence 99999999999999999999988864 5999999999986 6678999999986 67763
No 288
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-34 Score=317.86 Aligned_cols=197 Identities=26% Similarity=0.369 Sum_probs=165.4
Q ss_pred ccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-------ccccceEEEEccCC
Q 000562 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND 911 (1419)
Q Consensus 839 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~d 911 (1419)
++++.+ |+|+++++ |+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++
T Consensus 10 ~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~ 84 (214)
T cd03297 10 LPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQY 84 (214)
T ss_pred cCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCC
Confidence 344445 99999999 9999999999999999999999866 468999999987531 12356799999999
Q ss_pred CCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 000562 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1419)
Q Consensus 912 ~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ill 991 (1419)
.+++.+|++|++.+..... .....++.++++++.+++.+..+.. +..||||||||++||++|+.+|++++
T Consensus 85 ~~~~~~t~~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lll 154 (214)
T cd03297 85 ALFPHLNVRENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLL 154 (214)
T ss_pred ccCCCCCHHHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8888999999998764321 1223345678899999998766654 35799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 155 LDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999865 899999999976 46678999999985 7887765
No 289
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=6.7e-34 Score=320.11 Aligned_cols=202 Identities=25% Similarity=0.315 Sum_probs=167.3
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC--CCCceEEEEc-cCCCCCC
Q 000562 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVS-QQDWQVA 222 (1419)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~ 222 (1419)
.++++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|++.... ..++.++|++ |++.+++
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 3457999999999999999999999999999999999998775 99999999875332 2245789997 5566778
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
.+||+||+.+.....+... ++....++.+++.+||++..|+.++
T Consensus 109 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-- 152 (236)
T cd03267 109 DLPVIDSFYLLAAIYDLPP----------------------------------ARFKKRLDELSELLDLEELLDTPVR-- 152 (236)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhcCChh--
Confidence 8999999987543321100 0011235678889999988887765
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|+
T Consensus 153 ---~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiivsH~~~~~~~~~d~i~~l~ 228 (236)
T cd03267 153 ---QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRER-GTTVLLTSHYMKDIEALARRVLVID 228 (236)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcC-CCEEEEEecCHHHHHHhCCEEEEEe
Confidence 599999999999999999999999999999999999999999999987543 4567778899999999999999999
Q ss_pred CCeEEEEc
Q 000562 383 EGQIVYQG 390 (1419)
Q Consensus 383 ~G~iv~~G 390 (1419)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 290
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=328.72 Aligned_cols=209 Identities=25% Similarity=0.394 Sum_probs=170.2
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc------eEEEEEEECCccCCc---ccccceEEEEccC
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG------IIEGDIYISGYPKRQ---ETFARISGYCEQN 910 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~ 910 (1419)
+++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+... ..+++.++|++|+
T Consensus 12 ~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~ 91 (272)
T PRK13547 12 RHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQA 91 (272)
T ss_pred CCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEeccc
Confidence 3457999999999999999999999999999999999976521 127999999987532 2345568999999
Q ss_pred CCCCCCccHHHHHHHHhhhcCC-CCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHh-----
Q 000562 911 DIHSPGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV----- 984 (1419)
Q Consensus 911 d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~----- 984 (1419)
+..++.+|++|++.+....+.. ......+..+.++++++.+++.+..+.. +..||||||||++||++|+
T Consensus 92 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~~~~ 166 (272)
T PRK13547 92 AQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----VTTLSGGELARVQFARVLAQLWPP 166 (272)
T ss_pred CCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhccccc
Confidence 8766679999999875321110 0111123345678899999998766654 3579999999999999999
Q ss_pred ----hCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 985 ----ANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 985 ----~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
.+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+..
T Consensus 167 ~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 167 HDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHADRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred cccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEEecCHH
Confidence 599999999999999999999999999999876 899999999986 46678999999985 7999999853
No 291
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=334.95 Aligned_cols=203 Identities=26% Similarity=0.291 Sum_probs=171.9
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEEEccCC--CC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IH 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d--~~ 913 (1419)
..+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.++||+|++ .+
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l 105 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSL 105 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhc
Confidence 579999999999999999999999999999999999876 458999999987542 13456799999997 57
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
.|.+|+.+++........ .....+.++++.++++.+||.+ ..+.. +..||||||||++||+||+.+|++|++
T Consensus 106 ~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p~~LSgGq~QRv~iArAL~~~P~lLil 178 (327)
T PRK11308 106 NPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRY-----PHMFSGGQRQRIAIARALMLDPDVVVA 178 (327)
T ss_pred CCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCC-----CccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 889999999877544321 2234455667899999999963 44543 458999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
||||+|||..++..|++.|+++.++ |.|||++|||.+ .+.+.+|++++|.+ |+++..|+..
T Consensus 179 DEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~-G~ive~g~~~ 240 (327)
T PRK11308 179 DEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL-GRCVEKGTKE 240 (327)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 9999999999999999999999764 999999999976 45678999999985 7999999853
No 292
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.7e-35 Score=337.52 Aligned_cols=202 Identities=27% Similarity=0.411 Sum_probs=167.2
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCC
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 223 (1419)
+.++|+|+|+++++||.++|+|++|||||||++.|+|-++++ +|+|+.||.++..... ++.++.++|... +..
T Consensus 350 ~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~h-lF~ 425 (573)
T COG4987 350 QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRVH-LFS 425 (573)
T ss_pred ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccchH-HHH
Confidence 346999999999999999999999999999999999999887 9999999999877665 467899999875 556
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCC-------ccccc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL-------DTCAD 296 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL-------~~~~d 296 (1419)
.|+|+||..+...- .|++ .-.+++.+|| ++..|
T Consensus 426 ~Tlr~NL~lA~~~A----------------------sDEe------------------l~~aL~qvgL~~l~~~~p~gl~ 465 (573)
T COG4987 426 GTLRDNLRLANPDA----------------------SDEE------------------LWAALQQVGLEKLLESAPDGLN 465 (573)
T ss_pred HHHHHHHhhcCCCC----------------------CHHH------------------HHHHHHHcCHHHHHHhChhhhh
Confidence 79999998753210 0111 1223333333 44778
Q ss_pred ccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcC
Q 000562 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1419)
Q Consensus 297 t~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 376 (1419)
|.+|+ +.++||||||||++|||+|++++++++|||||.|||+.|..++++.+.+.++ +++++.++|+...+ +.||
T Consensus 466 t~lge-~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~---~kTll~vTHrL~~l-e~~d 540 (573)
T COG4987 466 TWLGE-GGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE---GKTLLMVTHRLRGL-ERMD 540 (573)
T ss_pred chhcc-CCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc---CCeEEEEecccccH-hhcC
Confidence 99986 5568999999999999999999999999999999999999999999987653 45566688887766 6789
Q ss_pred eEEEEcCCeEEEEcChhhHHH
Q 000562 377 DVILLSEGQIVYQGPRVSVLD 397 (1419)
Q Consensus 377 ~vilL~~G~iv~~G~~~~~~~ 397 (1419)
+|++|++|+++++|.+.++..
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEEECCeeeecCCHHhhhc
Confidence 999999999999999998864
No 293
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-34 Score=331.97 Aligned_cols=211 Identities=22% Similarity=0.302 Sum_probs=171.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1419)
.++|+|+|++|++||+++|+|||||||||||++|+|..++. .+.+|+|.++|+++... ..++.++||+|++++
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35999999999999999999999999999999999987531 13589999999988532 235679999999997
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1419)
+ +.||+|||.|+....+... .+ ..+..++.+++.++|.+..++.++
T Consensus 175 ~-~~ti~eNi~~~~~~~~~~~----------~~-----------------------~~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 F-EMSIFDNVAYGPRNNGIND----------RK-----------------------ILEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred C-CCcHHHHHHhHHHhcCCCh----------HH-----------------------HHHHHHHHHHHHcCCcchhhhhhh
Confidence 7 5899999998643221100 00 001224566777777655556665
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 380 (1419)
+...+|||||||||+||||++.+|+|++|||||+|||+.+...+.+.|+++.+ +.++++++|....+.+.+|+|++
T Consensus 221 -~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~---~~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 -KAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK---KYSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred -CCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCEEEE
Confidence 45668999999999999999999999999999999999999999999998754 36677799999999999999999
Q ss_pred EcCCeEEEEcChhhHH
Q 000562 381 LSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1419)
|++|++++.|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999874
No 294
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.2e-32 Score=366.36 Aligned_cols=135 Identities=21% Similarity=0.316 Sum_probs=107.0
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccc-cCCcccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELV---ANPS 988 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~~g~~~~~~lSgGqrqrl~iA~~L~---~~p~ 988 (1419)
.+...||.|+|.++..-........++..+.+ ++++.+||.+. .+.. ...||||||||+.||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44578999999886542211111123334445 47888999775 4554 3479999999999999998 6999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEe-----cCCEEEEeCCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPLG 1055 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~gG~~~~~G~~~ 1055 (1419)
+++|||||+|||+.+...+++.|++++++|.|||+++|++. .+ ..+|++++|. .||+++..|+..
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999976 34 8899999995 368999999863
No 295
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=323.88 Aligned_cols=208 Identities=23% Similarity=0.314 Sum_probs=167.9
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC-ceEEEEEEECCccCCc---ccccceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG-GIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~-~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~ 916 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|.... .+.+|+|.++|.+... ..+++.++|++|++.+++
T Consensus 14 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~- 92 (246)
T PRK14269 14 KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV- 92 (246)
T ss_pred CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-
Confidence 35799999999999999999999999999999999997531 2468999999987643 234567999999988887
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
.|++||+.+....+.... .....+++++++++.+++.+....... ...+.||||||||++|||+|+.+|++++|||||
T Consensus 93 ~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~lllLDEP~ 170 (246)
T PRK14269 93 KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLK-QNALALSGGQQQRLCIARALAIKPKLLLLDEPT 170 (246)
T ss_pred ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhc-CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 699999988654432111 122334567889999999532111111 124579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 171 ~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 225 (246)
T PRK14269 171 SALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFGES 225 (246)
T ss_pred ccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEECCH
Confidence 99999999999999999864 899999999976 46778999999985 799999874
No 296
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=339.86 Aligned_cols=190 Identities=24% Similarity=0.370 Sum_probs=166.8
Q ss_pred ceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-------ccccceEEEEccCCCCCCCccH
Q 000562 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.+||++|++.+++++||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999876 468999999987532 1245679999999999999999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+||+.|+.. ....+.++++++.++|.+..+..+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999988532 112345789999999988777654 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999999865 899999999986 57788999999985 799999985
No 297
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-34 Score=324.97 Aligned_cols=216 Identities=23% Similarity=0.302 Sum_probs=173.8
Q ss_pred ceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCC--C-ceEEEEEEEC
Q 000562 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYIS 891 (1419)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~i~ 891 (1419)
..+.++|+++.. ++..+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++
T Consensus 12 ~~l~~~~l~~~~-------------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~ 78 (260)
T PRK10744 12 SKIQVRNLNFYY-------------GKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLD 78 (260)
T ss_pred ceEEEEEEEEEe-------------CCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEEC
Confidence 345666665543 22469999999999999999999999999999999999753 1 1358999999
Q ss_pred CccCCc-----ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc----ccCCccc
Q 000562 892 GYPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIG 962 (1419)
Q Consensus 892 g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g 962 (1419)
|.+... ..+++.++|++|++.+++ .|++||+.+....+. ....++..++++++++.+++.+ ..+..
T Consensus 79 g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 153 (260)
T PRK10744 79 GENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS-- 153 (260)
T ss_pred CEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC--
Confidence 987532 234567999999988777 899999988654321 1223334456889999998743 22322
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEE
Q 000562 963 LPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1419)
Q Consensus 963 ~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1042 (1419)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++ ++.|||+++|++. ++.+.+|++++|
T Consensus 154 ---~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l 228 (260)
T PRK10744 154 ---GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAFM 228 (260)
T ss_pred ---CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEE
Confidence 45799999999999999999999999999999999999999999999986 4789999999976 466789999999
Q ss_pred ecCCEEEEeCCC
Q 000562 1043 KRGGELIYAGPL 1054 (1419)
Q Consensus 1043 ~~gG~~~~~G~~ 1054 (1419)
++ |+++..|+.
T Consensus 229 ~~-G~i~~~g~~ 239 (260)
T PRK10744 229 YL-GELIEFGNT 239 (260)
T ss_pred EC-CEEEEeCCH
Confidence 85 799998874
No 298
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-34 Score=322.76 Aligned_cols=208 Identities=21% Similarity=0.302 Sum_probs=168.6
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCC--Cc-eEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--GG-IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 16 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 95 (252)
T PRK14256 16 KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPN 95 (252)
T ss_pred CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCC
Confidence 3569999999999999999999999999999999999753 11 247999999987532 234667999999999
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+++.+|++||+.+....+. .....+.++.++++++.+++.+....... ..+..||||||||++||++|+.+|++|+|
T Consensus 96 ~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrl~laral~~~p~llll 172 (252)
T PRK14256 96 PFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAMELSGGQQQRLCIARTIAVKPEVILM 172 (252)
T ss_pred CCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8999999999987643321 11223334567888999998542111111 12457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 173 DEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 231 (252)
T PRK14256 173 DEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GDLVECGET 231 (252)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999975 689999999976 56688999999985 799999885
No 299
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=325.68 Aligned_cols=205 Identities=21% Similarity=0.300 Sum_probs=167.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC-------CCceEEEEccCCC-
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDW- 219 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~- 219 (1419)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999998775 999999999875421 2356999999962
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcc-ccccc
Q 000562 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTL 298 (1419)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 298 (1419)
.+...||+||+.|.....+... .+....++.+++.+||.. ..+..
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 142 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVSQ----------------------------------EEAEALAREKLALVGISESLFEKN 142 (280)
T ss_pred hhccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 3335799999987543211100 001123567888899963 44544
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.+++|++
T Consensus 143 ~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 143 P-----FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQS--GMTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeccHHHHHHhCCEE
Confidence 4 469999999999999999999999999999999999999999999998652 556777889999999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000562 379 ILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1419)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988763
No 300
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-34 Score=333.59 Aligned_cols=207 Identities=18% Similarity=0.255 Sum_probs=169.7
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC-c-eEEEEEEECCccCCc---cc----ccceEEEEccCC-
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG-G-IIEGDIYISGYPKRQ---ET----FARISGYCEQND- 911 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~-~-~~~G~i~i~g~~~~~---~~----~~~~~gyv~Q~d- 911 (1419)
..+|+||||+|++||++||+|+||||||||+++|+|..+. + +.+|+|.++|.++.. .. +++.++|++|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 5799999999999999999999999999999999997642 2 468999999987542 11 224699999997
Q ss_pred -CCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 000562 912 -IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1419)
Q Consensus 912 -~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~il 990 (1419)
.+.|.+|+.+++........ ....++.++.+.++++.++|.+..+.. ...+..|||||||||+||+||+.+|++|
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l--~~~p~~LSgGq~QRv~iArAL~~~P~ll 175 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRL--DVYPHQLSGGMSQRVMIAMAIACRPKLL 175 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHH--hCCchhCCHHHHHHHHHHHHHHhCCCEE
Confidence 47889999998876543321 123445567789999999997532111 1124589999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 991 FMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
++||||+|||+.++..+++.|+++.+ .|.|+|++|||++ .+.+.+|++++|.+ |+++..|+.
T Consensus 176 ilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~~-G~ive~g~~ 238 (326)
T PRK11022 176 IADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMYA-GQVVETGKA 238 (326)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 99999999999999999999999976 4899999999986 46678999999985 899999985
No 301
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.8e-34 Score=316.52 Aligned_cols=198 Identities=24% Similarity=0.314 Sum_probs=166.9
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-ccccceEEEEccCCCCCCCccHHHH
Q 000562 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTVLES 922 (1419)
Q Consensus 844 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~E~ 922 (1419)
.++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|++||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 3569999999999999999999999999999999876 458999999987543 2345679999999999999999999
Q ss_pred HHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHH
Q 000562 923 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 1002 (1419)
Q Consensus 923 l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~ 1002 (1419)
+.+....+. ... .+.++.++++++.+++.+..+..+ ..||+|||||++||++|+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~~~-~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KLN-AEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Ccc-HHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 987542211 111 223456788999999987776653 479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCC
Q 000562 1003 AAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 1053 (1419)
Q Consensus 1003 ~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1053 (1419)
++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|.+ |+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999976 46678999999985 79988774
No 302
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-34 Score=324.79 Aligned_cols=206 Identities=26% Similarity=0.352 Sum_probs=166.0
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCC---CceEEEEEEECCccCCc-----ccccceEEEEccCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT---GGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~---~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~ 913 (1419)
+.+|+|+|+++++||+++|+|+||||||||+++|+|... ..+.+|+|.++|.+... ..+++.++|++|++.+
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 98 (253)
T PRK14242 19 FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNP 98 (253)
T ss_pred eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCC
Confidence 469999999999999999999999999999999999742 11358999999987532 2345679999999888
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
++ .||+||+.+....+.. ...+...+.++++++.+++.+....... ..+..||||||||++||++|+.+|++|+||
T Consensus 99 ~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LSgGq~qrv~laral~~~p~llllD 174 (253)
T PRK14242 99 FP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLH-ESALGLSGGQQQRLCIARALAVEPEVLLMD 174 (253)
T ss_pred Cc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 87 5999999887543311 1222334567888999888542111111 124579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 175 EPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 232 (253)
T PRK14242 175 EPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM-GKLIEVGPT 232 (253)
T ss_pred CCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999985 4799999999986 46688999999985 799988874
No 303
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=338.60 Aligned_cols=195 Identities=25% Similarity=0.405 Sum_probs=169.6
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC-------CCCceEEEEccCCCCCCCCC
Q 000562 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 225 (1419)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++++|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999998776 99999999886431 12467999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+||+.|+.+.. ....++.+++.+||++..+..+ +
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999998753200 0123577889999987777655 4
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|++++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREI-NIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999987643 4567778999999999999999999999
Q ss_pred EEEEcChhhHH
Q 000562 386 IVYQGPRVSVL 396 (1419)
Q Consensus 386 iv~~G~~~~~~ 396 (1419)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999998874
No 304
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.3e-35 Score=337.73 Aligned_cols=211 Identities=23% Similarity=0.403 Sum_probs=174.5
Q ss_pred cceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCc
Q 000562 814 PLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY 893 (1419)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~ 893 (1419)
+-++.|+|+.+++. +++++|+++||+|++||.+||+|+|||||||++++|.+... .+|+|+|||.
T Consensus 349 ~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~ 413 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQ 413 (591)
T ss_pred CCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCe
Confidence 44588888887763 34569999999999999999999999999999999998764 4899999999
Q ss_pred cCCc---ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-------ccCCcccC
Q 000562 894 PKRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-------LSGALIGL 963 (1419)
Q Consensus 894 ~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-------~~~~~~g~ 963 (1419)
+++. +..|+.+||||||..++ +-||.+|+.|+. .+.+.+ .|-++.+..++.+ -.++.+|.
T Consensus 414 dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 414 DIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVGE 483 (591)
T ss_pred eHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHhh
Confidence 8643 56889999999987776 569999999863 233322 3455555555543 33455776
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000562 964 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1419)
Q Consensus 964 ~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1043 (1419)
.|. .|||||||||+|||+++.+|+|+++|||||.||+.+...+++.+++. ..|+|+|++.|+. ++...||+|++|+
T Consensus 484 rG~-~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l~ 559 (591)
T KOG0057|consen 484 RGL-MLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVLD 559 (591)
T ss_pred ccc-ccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEEE
Confidence 553 59999999999999999999999999999999999999999999994 4689999999996 4788999999999
Q ss_pred cCCEEEEeCCC
Q 000562 1044 RGGELIYAGPL 1054 (1419)
Q Consensus 1044 ~gG~~~~~G~~ 1054 (1419)
+ |++...|+-
T Consensus 560 n-G~v~e~gth 569 (591)
T KOG0057|consen 560 N-GTVKEYGTH 569 (591)
T ss_pred C-CeeEEeccH
Confidence 6 789988885
No 305
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-34 Score=291.33 Aligned_cols=201 Identities=28% Similarity=0.401 Sum_probs=177.7
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHH
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 921 (1419)
..+|+|+|++|.+||.++++||||||||||||+++|..+ +..|+|.+||.++.-..- .-|.|+|++.++|-+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 458999999999999999999999999999999999887 568999999998653221 2389999999999999999
Q ss_pred HHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCH
Q 000562 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1419)
Q Consensus 922 ~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~ 1001 (1419)
|+.|+..++ .+.+.++.+.+.+.+..+||.+..+..+ -+||||||||+.|||||+.+|++|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999999887 4567888899999999999999887765 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hcCCEEEEEecCCCHHHHHhcCeEEEEecC-CEEEEeCCCC
Q 000562 1002 RAAAIVMRTVRNIV-NTGRTIVCTIHQPSIDIFESFDELLFMKRG-GELIYAGPLG 1055 (1419)
Q Consensus 1002 ~~~~~i~~~l~~l~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g-G~~~~~G~~~ 1055 (1419)
-+++.++++|-++. ++|+.++++||+.. +..-.+++++||+.| |+++..-|++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 99999999999886 56999999999986 455578999999832 6888777763
No 306
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=328.60 Aligned_cols=200 Identities=24% Similarity=0.342 Sum_probs=169.9
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCC-CCCCc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~-~~~~l 917 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.+||++|++. .++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGA 99 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcc
Confidence 468999999999999999999999999999999999876 468999999987643 234667999999974 56788
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
|++||+.+..... ....++..+.++++++.+++.+..+..+ +.||||||||++|||+|+.+|++|+|||||+
T Consensus 100 tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~lllLDEP~~ 171 (271)
T PRK13632 100 TVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSGGQKQRVAIASVLALNPEIIIFDESTS 171 (271)
T ss_pred cHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998864322 1223334556889999999987777654 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+.++..+++.|++++++ ++|||+++|+++. + ..+|++++|.+ |+++..|+.
T Consensus 172 gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~~g~~ 226 (271)
T PRK13632 172 MLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIAQGKP 226 (271)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999766 5999999999863 4 47999999985 799988875
No 307
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-34 Score=320.33 Aligned_cols=199 Identities=27% Similarity=0.379 Sum_probs=170.5
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc-cccceEEEEccCCCCCCCccHHHH
Q 000562 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTVLES 922 (1419)
Q Consensus 844 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~d~~~~~lTv~E~ 922 (1419)
+|+|+|++|+|||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.+|+.|+
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999866 5689999999876431 234679999999998989999999
Q ss_pred HHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHH
Q 000562 923 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 1002 (1419)
Q Consensus 923 l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~ 1002 (1419)
+.+..... .....+..+.+.++++.++|.+..+..+ ..||||||||++||++|+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1222334456788999999987777654 479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1003 AAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1003 ~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
++..+.+.|++++.+ |+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998765 999999999986 46778999999985 799988875
No 308
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-34 Score=321.58 Aligned_cols=206 Identities=19% Similarity=0.331 Sum_probs=171.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1419)
+.+|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|+++|.++..... ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 36999999999999999999999999999999999998775 9999999988765332 3579999999988888
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
+||+||+.+..+..... + . .+....++.+++.+||++..++.+
T Consensus 93 ~tv~enl~~~~~~~~~~---~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 135 (241)
T PRK10895 93 LSVYDNLMAVLQIRDDL---S------A------------------------EQREDRANELMEEFHIEHLRDSMG---- 135 (241)
T ss_pred CcHHHHHhhhhhccccc---C------H------------------------HHHHHHHHHHHHHcCCHHHhhcch----
Confidence 99999998753321100 0 0 001224567889999987655544
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
+.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.+++++. . +.+++.++|+..++.+++|++++|++
T Consensus 136 -~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 136 -QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEEcCHHHHHHhcCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998764 2 45666788888999999999999999
Q ss_pred CeEEEEcChhhHH
Q 000562 384 GQIVYQGPRVSVL 396 (1419)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1419)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999987763
No 309
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-34 Score=331.42 Aligned_cols=200 Identities=21% Similarity=0.300 Sum_probs=166.3
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCC--------cccccceEEEEccCCCC-
Q 000562 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR--------QETFARISGYCEQNDIH- 913 (1419)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~--------~~~~~~~~gyv~Q~d~~- 913 (1419)
.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.. ...+++.++|++|++..
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~~ 102 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEYQ 102 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEccccccccccHHHHhccEEEEEeCcchh
Confidence 59999999999999999999999999999999999876 46899999998752 12345679999999742
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
....|++||+.|....+ ....++..+.++++++.++|. +..+.. ++.||||||||++|||+|+.+|++|+|
T Consensus 103 ~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~~LS~Gq~qrv~laral~~~p~lLlL 174 (289)
T PRK13645 103 LFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS-----PFELSGGQKRRVALAGIIAMDGNTLVL 174 (289)
T ss_pred hhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 23469999998864322 122333445678899999994 555554 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 175 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 235 (289)
T PRK13645 175 DEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE-GKVISIGSP 235 (289)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999998764 899999999986 57788999999985 799988874
No 310
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-34 Score=326.24 Aligned_cols=220 Identities=23% Similarity=0.284 Sum_probs=174.1
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC---ceEEEEEEECC
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 892 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 892 (1419)
.+.++|+++.. +++.+|+|+|++|+|||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~-------------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFY-------------GEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEE-------------CCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 45666665543 234699999999999999999999999999999999997542 13689999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCC
Q 000562 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 967 (1419)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 967 (1419)
.++.. ..+++.++|++|++.+++. ||+||+.+....+.. .....+..+.++++++.+++.+....... ..+.
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLH-EPGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87632 2345679999999887775 999999987543321 11223334567889999998642111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCE
Q 000562 968 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1419)
Q Consensus 968 ~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~ 1047 (1419)
.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ .+...+|++++|++ |+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 239 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFHL-GN 239 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 789999999976 46678999999985 79
Q ss_pred EEEeCCC
Q 000562 1048 LIYAGPL 1054 (1419)
Q Consensus 1048 ~~~~G~~ 1054 (1419)
++..|+.
T Consensus 240 i~~~g~~ 246 (267)
T PRK14235 240 LVEVGDT 246 (267)
T ss_pred EEEeCCH
Confidence 9998874
No 311
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=322.12 Aligned_cols=196 Identities=24% Similarity=0.313 Sum_probs=166.7
Q ss_pred ceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc-cccceEEEEccCCCCCCCccHHHHHHH
Q 000562 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTVLESLLF 925 (1419)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f 925 (1419)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.+|+.||+.+
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~ 94 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGL 94 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhc
Confidence 8999999999999999999999999999999866 4689999999875431 224579999999999999999999987
Q ss_pred HhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHH
Q 000562 926 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 1005 (1419)
Q Consensus 926 ~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~ 1005 (1419)
...... .. .+..++.++++++.+++.+..+..+ ..||||||||++||++++.+|++++|||||+|||+.++.
T Consensus 95 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~ 166 (232)
T PRK10771 95 GLNPGL--KL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQ 166 (232)
T ss_pred cccccc--CC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHH
Confidence 532111 11 1233456889999999988777664 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 1006 IVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 1006 ~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
.+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 167 ~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 167 EMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999998764 899999999986 46678999999985 799999885
No 312
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=9.3e-34 Score=332.32 Aligned_cols=208 Identities=21% Similarity=0.259 Sum_probs=171.4
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc-eEEEEEEECCccCCc---cc---c-cceEEEEccCC-
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQ---ET---F-ARISGYCEQND- 911 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~---~~---~-~~~~gyv~Q~d- 911 (1419)
...+|+|||++|++||++||+|+||||||||+++|+|..+.. ..+|+|.++|.++.. .. + ++.++||+|++
T Consensus 28 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 107 (330)
T PRK09473 28 DVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPM 107 (330)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCch
Confidence 357999999999999999999999999999999999986531 238999999987642 11 2 24799999997
Q ss_pred -CCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcc
Q 000562 912 -IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1419)
Q Consensus 912 -~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~il 990 (1419)
.+.|.+|+.+++.+...... ....++..+++.++++.++|.+..+.. + ..+.+||||||||++||+||+.+|++|
T Consensus 108 ~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~p~~LSgG~~QRv~IArAL~~~P~ll 183 (330)
T PRK09473 108 TSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MYPHEFSGGMRQRVMIAMALLCRPKLL 183 (330)
T ss_pred hhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 67889999999977654332 223444556788899999987533221 1 235689999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 991 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
++||||+|||..++..+++.|+++.++ |.|+|++|||++ .+.+.+|++++|.+ |+++..|+.
T Consensus 184 ilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~-G~ive~g~~ 246 (330)
T PRK09473 184 IADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA-GRTMEYGNA 246 (330)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999999765 899999999976 46678999999985 899999985
No 313
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=364.12 Aligned_cols=209 Identities=22% Similarity=0.358 Sum_probs=166.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
.++|+|+|++++|||.++|+||||||||||+++|+|.++|. +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 36999999999999999999999999999999999999886 9999999999877653 478999999998665 6
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
|++|||.++..- ....+.+.+++ +... .+..++ .|++..||.+|+. .
T Consensus 432 Ti~~Ni~~~~~~---~~~~~~i~~al------------------~~~~---------l~~~i~--~lp~Gldt~ig~~-g 478 (582)
T PRK11176 432 TIANNIAYARTE---QYSREQIEEAA------------------RMAY---------AMDFIN--KMDNGLDTVIGEN-G 478 (582)
T ss_pred hHHHHHhcCCCC---CCCHHHHHHHH------------------HHhC---------cHHHHH--hcccccCceeCCC-C
Confidence 999999875210 00011111111 1000 111122 2677889999975 4
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
++||||||||++||||++++|++++||||||+||+.++..+.+.|++... ++| ++.++|.. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~--~~t-vI~VtHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK--NRT-SLVIAHRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC--CCE-EEEEecch-HHHHhCCEEEEEECC
Confidence 67999999999999999999999999999999999999999999998743 344 45566665 556789999999999
Q ss_pred eEEEEcChhhHHH
Q 000562 385 QIVYQGPRVSVLD 397 (1419)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1419)
+++++|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999998864
No 314
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=329.49 Aligned_cols=200 Identities=24% Similarity=0.305 Sum_probs=169.7
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc----ccccceEEEEccCCC-CCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDI-HSPG 916 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d~-~~~~ 916 (1419)
+.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++. .+..
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVA 100 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeccccccHHHHhhheEEEecChhhhhcc
Confidence 469999999999999999999999999999999999876 468999999987643 234667999999974 2335
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
.||.|++.|..... .....+.++.++++++.++|.+..++.+ ..||||||||++||++|+.+|++++|||||
T Consensus 101 ~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt 172 (280)
T PRK13633 101 TIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLSGGQKQRVAIAGILAMRPECIIFDEPT 172 (280)
T ss_pred ccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 69999999875432 1233444567899999999988777654 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|||+.++..+.+.|++++++ |+|||+++|+++. + ..+|++++|++ |++++.|+.
T Consensus 173 ~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~-~-~~~d~v~~l~~-G~i~~~g~~ 228 (280)
T PRK13633 173 AMLDPSGRREVVNTIKELNKKYGITIILITHYMEE-A-VEADRIIVMDS-GKVVMEGTP 228 (280)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHH-H-hcCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999764 9999999999873 4 45999999985 799999985
No 315
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=325.08 Aligned_cols=205 Identities=23% Similarity=0.323 Sum_probs=170.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC----CCceEEEEccCCC-CCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDW-QVA 222 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 222 (1419)
+++|+|+|++|++||+++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999875 999999999875422 2467999999974 344
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
..||.||+.|+....+... .+....++++++.+||++..++.++
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~-- 143 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAPH-- 143 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCcc--
Confidence 5799999988643221100 0012246788999999887777664
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.. +|++++|+
T Consensus 144 ---~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 144 ---LLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKK-YGITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred ---cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecChHHHhc-CCEEEEEE
Confidence 59999999999999999999999999999999999999999999998653 35566668888888865 99999999
Q ss_pred CCeEEEEcChhhHH
Q 000562 383 EGQIVYQGPRVSVL 396 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1419)
+|+++++|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999988875
No 316
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4.7e-34 Score=317.16 Aligned_cols=195 Identities=27% Similarity=0.383 Sum_probs=164.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC------CCceEEEEccCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1419)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 35999999999999999999999999999999999998775 999999999876432 235799999999989
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+.+||+||+.+.....+.. . .+....++++++.+||++..++.++
T Consensus 91 ~~~t~~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 135 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP--P--------------------------------REIRKRVPAALELVGLSHKHRALPA- 135 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHHHHHHHcCCHHHhhCChh-
Confidence 9999999998864332110 0 0011235678889999877766554
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+. +++++.++|+..++.+++|++++|
T Consensus 136 ----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 136 ----ELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKA--GTTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred ----hcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 69999999999999999999999999999999999999999999998643 456777889999999999999999
Q ss_pred cCCeE
Q 000562 382 SEGQI 386 (1419)
Q Consensus 382 ~~G~i 386 (1419)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 317
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=320.67 Aligned_cols=206 Identities=23% Similarity=0.301 Sum_probs=166.5
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
.+|+|+|+++++||+++|+|||||||||||++|+|.+++. .+.+|+|.++|+++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 5899999999999999999999999999999999998763 13489999999876421 1246799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc----ccccc
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCADT 297 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 297 (1419)
.+||+||+.|+....+.... ......++..++.+|+. +..|+
T Consensus 101 -~~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 -LMSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred -cCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 48999999886432211000 00112355667777763 33454
Q ss_pred cccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000562 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1419)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 377 (1419)
. .+.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++++ + ++++.++|+..++.+++|+
T Consensus 147 ~-----~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 N-----ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE--S-YTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred C-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCE
Confidence 4 456999999999999999999999999999999999999999999999853 3 5677788999999999999
Q ss_pred EEEEcCCeEEEEcChhhHH
Q 000562 378 VILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1419)
+++|++|+++..|+.+++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 318
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=323.13 Aligned_cols=197 Identities=25% Similarity=0.356 Sum_probs=165.8
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGL 917 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~l 917 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++ .
T Consensus 15 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~ 91 (241)
T PRK14250 15 GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-G 91 (241)
T ss_pred CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhhhcChHHhhhcEEEEecCchhch-h
Confidence 3469999999999999999999999999999999999865 468999999987532 234567999999988776 6
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
|++|++.+....+ .. ..+.++++++.+++. +..+.. +..||||||||++||++|+.+|++|+|||||
T Consensus 92 tv~e~l~~~~~~~---~~----~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt 159 (241)
T PRK14250 92 TVKDNIEYGPMLK---GE----KNVDVEYYLSIVGLNKEYATRD-----VKNLSGGEAQRVSIARTLANNPEVLLLDEPT 159 (241)
T ss_pred hHHHHHhcchhhc---Cc----HHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 9999998753322 11 124567889999996 455543 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 160 ~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (241)
T PRK14250 160 SALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVEYAKT 216 (241)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEeCCH
Confidence 999999999999999999764 899999999986 46678999999985 789888875
No 319
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=5.4e-34 Score=316.58 Aligned_cols=193 Identities=27% Similarity=0.392 Sum_probs=162.7
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC------CCceEEEEccCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQVA 222 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 222 (1419)
++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|+++.... .++.++|++|++.+++
T Consensus 16 ~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (214)
T TIGR02673 16 AALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLP 92 (214)
T ss_pred eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhcc
Confidence 5999999999999999999999999999999999998765 999999999876542 2357999999998888
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
.+||+||+.++....+... ...+..++++++.+||++..++.+.
T Consensus 93 ~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 136 (214)
T TIGR02673 93 DRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFPE-- 136 (214)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCChh--
Confidence 9999999988643221000 0012245778899999876666554
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. +++++.++|+..++.+++|++++|+
T Consensus 137 ---~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~~tH~~~~~~~~~d~i~~l~ 211 (214)
T TIGR02673 137 ---QLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKR--GTTVIVATHDLSLVDRVAHRVIILD 211 (214)
T ss_pred ---hCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhcCEEEEec
Confidence 69999999999999999999999999999999999999999999998642 4567778899999999999999999
Q ss_pred CCe
Q 000562 383 EGQ 385 (1419)
Q Consensus 383 ~G~ 385 (1419)
+|+
T Consensus 212 ~G~ 214 (214)
T TIGR02673 212 DGR 214 (214)
T ss_pred CCC
Confidence 985
No 320
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-34 Score=329.71 Aligned_cols=205 Identities=24% Similarity=0.318 Sum_probs=170.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC-------CCceEEEEccCCC-
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDW- 219 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~- 219 (1419)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45999999999999999999999999999999999999876 999999999875321 1357999999962
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc-cccccc
Q 000562 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1419)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1419)
.+..+||+||+.|+....+.. . .+....++++++.+||+ ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------E------------------------DEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 344689999998864321110 0 00122467789999996 455655
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
++ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.++||+|
T Consensus 143 ~~-----~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 PF-----ELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred cc-----cCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEE
Confidence 54 6999999999999999999999999999999999999999999999864 3567777999999999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000562 379 ILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1419)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 321
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.7e-34 Score=318.91 Aligned_cols=202 Identities=26% Similarity=0.326 Sum_probs=167.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1419)
.++|+|+|+++++||+++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 36999999999999999999999999999999999999875 9999999988754332 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhC-CcccccccccCc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG-LDTCADTLVGDE 302 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 302 (1419)
+|++||+.++....+.. .....+.+++.++ +.+..|+.+
T Consensus 90 ~tv~~~l~~~~~~~~~~-------------------------------------~~~~~~~~l~~~~~l~~~~~~~~--- 129 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR-------------------------------------SRKIPDEIYELFPVLKEMLGRRG--- 129 (230)
T ss_pred CcHHHHHHHHHHhcCcc-------------------------------------hHHHHHHHHHHHHhHHHHhhCCh---
Confidence 99999998764321100 0011344566665 454445444
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
+.||||||||++||+||+.+|++++|||||+|||+.++.++.+.|+++++. .+++++.++|+.+++.+++|+|++|+
T Consensus 130 --~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 130 --GDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVME 206 (230)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEE
Confidence 469999999999999999999999999999999999999999999998753 25667778899999999999999999
Q ss_pred CCeEEEEcChhhH
Q 000562 383 EGQIVYQGPRVSV 395 (1419)
Q Consensus 383 ~G~iv~~G~~~~~ 395 (1419)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998765
No 322
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=5.5e-34 Score=326.69 Aligned_cols=202 Identities=21% Similarity=0.311 Sum_probs=168.9
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCC--CCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI--HSPG 916 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~--~~~~ 916 (1419)
+.+|+|+|+++++||++||+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.++|++|++. +.+.
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 103 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNPR 103 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCchhhHhccEEEEecCchhhcCcc
Confidence 469999999999999999999999999999999999876 468999999987642 123456999999875 5678
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
+|+.|++.+....+. .....+..+.++++++.+++. +..+.. +..||||||||++||++|+.+|+||+||||
T Consensus 104 ~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLDEP 176 (267)
T PRK15112 104 QRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLAPGQKQRLGLARALILRPKVIIADEA 176 (267)
T ss_pred hhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcCHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 899999988654432 122233445678999999994 555543 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 177 t~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 234 (267)
T PRK15112 177 LASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVVERGST 234 (267)
T ss_pred cccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 9999999999999999999765 899999999986 56678999999985 799988874
No 323
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.1e-33 Score=321.01 Aligned_cols=206 Identities=23% Similarity=0.367 Sum_probs=169.6
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|. .+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 5899999999999999999999999999999999998752 12389999999987542 1246799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc----ccccc
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCADT 297 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 297 (1419)
+ +||+||+.+.....+.... .+....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKDK---------------------------------KELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 7 9999999886433210000 00112356788899997 44554
Q ss_pred cccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000562 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1419)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 377 (1419)
.+ +.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ + .+++.++|+..++.+++|+
T Consensus 141 ~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 SA-----LGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 43 46999999999999999999999999999999999999999999998865 3 5677788999999999999
Q ss_pred EEEEcCCeEEEEcChhhHH
Q 000562 378 VILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1419)
+++|++|+++++|+.+++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999987763
No 324
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=4.7e-34 Score=327.89 Aligned_cols=236 Identities=27% Similarity=0.387 Sum_probs=188.4
Q ss_pred HhcCCCCCCcEEEEeeeEEEEEEecCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcceeeeecceEeEeCCeEEEEEcCC
Q 000562 91 EAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPP 170 (1419)
Q Consensus 91 ~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~ 170 (1419)
+++.++-|+-.+..|++++- . ...++++|+|+||.+.+|+-++|+|||
T Consensus 324 ~~m~LP~P~g~L~Ve~l~~~---P-----------------------------Pg~~~pil~~isF~l~~G~~lgIIGPS 371 (580)
T COG4618 324 ERMPLPAPQGALSVERLTAA---P-----------------------------PGQKKPILKGISFALQAGEALGIIGPS 371 (580)
T ss_pred CCCCCCCCCceeeEeeeeec---C-----------------------------CCCCCcceecceeEecCCceEEEECCC
Confidence 35667777788888888852 1 113467999999999999999999999
Q ss_pred CCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCC---ceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCchhhhH
Q 000562 171 SSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP---RTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMIT 247 (1419)
Q Consensus 171 GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~ 247 (1419)
|||||||.++|.|...|. +|.|.+||.+++..++. +.+||.||+--+|+ .||.|||. |+... ...+.+.
T Consensus 372 gSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa---Rf~~~-~d~~kIi 443 (580)
T COG4618 372 GSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA---RFGEE-ADPEKVI 443 (580)
T ss_pred CccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH---hcccc-CCHHHHH
Confidence 999999999999998765 99999999999877653 78999999987665 59999994 33211 1112222
Q ss_pred HHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCChHHhHHHHHHHHHhCCCcE
Q 000562 248 ELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARV 327 (1419)
Q Consensus 248 ~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~i 327 (1419)
++++. .+ ..|- ++.|++.+||.||+. ..+||||||||+++|||++++|.+
T Consensus 444 eAA~l---------------------Ag-----vHel---Il~lP~GYdT~iG~~-G~~LSgGQRQRIaLARAlYG~P~l 493 (580)
T COG4618 444 EAARL---------------------AG-----VHEL---ILRLPQGYDTRIGEG-GATLSGGQRQRIALARALYGDPFL 493 (580)
T ss_pred HHHHH---------------------cC-----hHHH---HHhCcCCccCccCCC-CCCCCchHHHHHHHHHHHcCCCcE
Confidence 22221 11 1121 567999999999975 458999999999999999999999
Q ss_pred eEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChhhHHHHH
Q 000562 328 LFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFF 399 (1419)
Q Consensus 328 lllDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F 399 (1419)
++||||-|.||+....-+.+.+.+... .|+|+|+ + .|.+.+...+|+|++|++|++..+|+++|++...
T Consensus 494 vVLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvv-i-aHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 494 VVLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVV-I-AHRPSALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred EEecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEE-E-ecCHHHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 999999999999999999999998764 3555554 4 3456788999999999999999999999998754
No 325
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-34 Score=326.64 Aligned_cols=201 Identities=25% Similarity=0.346 Sum_probs=170.0
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCC-CCCCc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~-~~~~l 917 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++. +++..
T Consensus 22 ~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 22 SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 358999999999999999999999999999999999876 468999999987643 234567999999974 67788
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
|+.+++.|..... ....++..+.++++++.+++.+..+.. +..||+|||||++|||+|+.+|++++|||||+
T Consensus 100 ~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~lllLDEPt~ 171 (269)
T PRK13648 100 IVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSGGQKQRVAIAGVLALNPSVIILDEATS 171 (269)
T ss_pred cHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998864332 122333445678899999998776654 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|||+.++..+.+.|++++++ |+|||+++|+++ ++. .+|++++|++ |++++.|+..
T Consensus 172 ~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~~g~~~ 227 (269)
T PRK13648 172 MLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYKEGTPT 227 (269)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999998765 899999999986 354 4999999985 7999999853
No 326
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.8e-33 Score=315.43 Aligned_cols=197 Identities=25% Similarity=0.367 Sum_probs=163.2
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-------CceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~~ 221 (1419)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 5999999999999999999999999999999999998776 9999999998765432 24699999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+.+||.||+.+.....+.. + .+....++.+++.+||.+..+..++
T Consensus 101 ~~~tv~~~l~~~~~~~~~~---~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 145 (228)
T PRK10584 101 PTLNALENVELPALLRGES---S-------------------------------RQSRNGAKALLEQLGLGKRLDHLPA- 145 (228)
T ss_pred CCcCHHHHHHHHHHhcCCC---H-------------------------------HHHHHHHHHHHHHcCCHhHhhCChh-
Confidence 9999999998754322100 0 0012246778899999877666554
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|++++... +++|+.++|+..++ +.+|++++|
T Consensus 146 ----~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~-~~~d~i~~l 219 (228)
T PRK10584 146 ----QLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREH-GTTLILVTHDLQLA-ARCDRRLRL 219 (228)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEE
Confidence 599999999999999999999999999999999999999999999986533 45566677888777 559999999
Q ss_pred cCCeEEEE
Q 000562 382 SEGQIVYQ 389 (1419)
Q Consensus 382 ~~G~iv~~ 389 (1419)
++|++++.
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99999753
No 327
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=6.9e-34 Score=319.01 Aligned_cols=201 Identities=25% Similarity=0.324 Sum_probs=166.0
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc--eEEEEEEECCccCCcccc-cceEEEEccCCC--CCCCcc
Q 000562 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG--IIEGDIYISGYPKRQETF-ARISGYCEQNDI--HSPGLT 918 (1419)
Q Consensus 844 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~d~--~~~~lT 918 (1419)
+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+...... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999986520 158999999987654322 357999999974 556789
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc---ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS---LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~---~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
+.|++.+....... .....++.++++++.+++.+ ..+.. +..|||||||||+||++|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLGK---LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcCc---cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 99999776433211 12333456889999999973 34443 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+|||+.+...+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999764 899999999986 56678999999985 799998874
No 328
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=321.64 Aligned_cols=200 Identities=27% Similarity=0.387 Sum_probs=167.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1419)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHH
Confidence 35999999999999999999999999999999999998775 9999999998754 234589999999888889999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000562 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1419)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1419)
||+.++....+.. .. +....++.+++.+||++..++.+ ..|
T Consensus 89 e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gl~~~~~~~~-----~~L 129 (255)
T PRK11248 89 DNVAFGLQLAGVE----------KM------------------------QRLEIAHQMLKKVGLEGAEKRYI-----WQL 129 (255)
T ss_pred HHHHhHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCChhHhhCCh-----hhC
Confidence 9998754322100 00 01124677899999987666554 469
Q ss_pred ChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc--CCe
Q 000562 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS--EGQ 385 (1419)
Q Consensus 308 SGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~--~G~ 385 (1419)
||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.+++|+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQE-TGKQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 999999999999999999999999999999999999999999988543 24567778899999999999999998 599
Q ss_pred EEEEcCh
Q 000562 386 IVYQGPR 392 (1419)
Q Consensus 386 iv~~G~~ 392 (1419)
++..++.
T Consensus 209 i~~~~~~ 215 (255)
T PRK11248 209 VVERLPL 215 (255)
T ss_pred EEEEecC
Confidence 9998864
No 329
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-35 Score=297.74 Aligned_cols=214 Identities=24% Similarity=0.365 Sum_probs=184.8
Q ss_pred ccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEcc
Q 000562 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQ 909 (1419)
Q Consensus 833 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q 909 (1419)
++.++.++.+.+|+++|..|++|.+++++|||||||||||.++++..+ ..+|+|.++|.++.. +..++.++..-|
T Consensus 5 ~nv~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ 82 (252)
T COG4604 5 ENVSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQ 82 (252)
T ss_pred hhhhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHh
Confidence 345556778899999999999999999999999999999999998766 568999999988643 456777888899
Q ss_pred CCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCc
Q 000562 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1419)
Q Consensus 910 ~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~i 989 (1419)
+......+||+|-+.|+..-.. .....++.+..+++.++.++|+++.|... .+||||||||.-||+.++++.+.
T Consensus 83 ~N~i~~rlTV~dLv~FGRfPYS-qGRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdy 156 (252)
T COG4604 83 ENHINSRLTVRDLVGFGRFPYS-QGRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDY 156 (252)
T ss_pred hchhhheeEHHHHhhcCCCccc-CCCCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcE
Confidence 8888889999999999743221 22233556678999999999999999875 47999999999999999999999
Q ss_pred ceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 990 VFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
++||||-++||...+..+|+.||+++++ |+|||++.||.+. .-..+|+|+-|++ |+++..|++++
T Consensus 157 vlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~e 222 (252)
T COG4604 157 VLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPDE 222 (252)
T ss_pred EEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHHH
Confidence 9999999999999999999999999976 9999999999874 4456799999985 89999999754
No 330
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=322.71 Aligned_cols=220 Identities=21% Similarity=0.269 Sum_probs=175.6
Q ss_pred ceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC---ceEEEEEEEC
Q 000562 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYIS 891 (1419)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 891 (1419)
..+.++|+++.. +.+.+|+|+|+++++||++||+|+|||||||||++|+|.... .+.+|+|.++
T Consensus 19 ~~l~~~nl~~~~-------------~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (267)
T PRK14237 19 IALSTKDLHVYY-------------GKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYR 85 (267)
T ss_pred eEEEEeeEEEEE-------------CCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEEC
Confidence 346666766543 235699999999999999999999999999999999997642 1468999999
Q ss_pred CccCCc-----ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCC
Q 000562 892 GYPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGI 966 (1419)
Q Consensus 892 g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~ 966 (1419)
|.+... ...++.++|++|++.+++ .||+||+.+..... . ....+..++.++++++.+++.+..+.... ..+
T Consensus 86 g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~-~-~~~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~ 161 (267)
T PRK14237 86 GIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA-G-VKDKKVLDEIVETSLKQAALWDQVKDDLH-KSA 161 (267)
T ss_pred CEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc-C-CCCHHHHHHHHHHHHHHcCCCchhhhhhc-CCc
Confidence 987632 134567999999988777 59999998864322 1 11233344567888999988532212222 224
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCC
Q 000562 967 NGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGG 1046 (1419)
Q Consensus 967 ~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG 1046 (1419)
..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++. ++.|||+++|+++ ++.+.+|++++|++ |
T Consensus 162 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~~-G 238 (267)
T PRK14237 162 LTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFFYL-G 238 (267)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEEEC-C
Confidence 6899999999999999999999999999999999999999999999985 4799999999986 57788999999985 7
Q ss_pred EEEEeCCC
Q 000562 1047 ELIYAGPL 1054 (1419)
Q Consensus 1047 ~~~~~G~~ 1054 (1419)
+++..|+.
T Consensus 239 ~i~~~g~~ 246 (267)
T PRK14237 239 DLIEYDKT 246 (267)
T ss_pred EEEEeCCH
Confidence 99999985
No 331
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-34 Score=322.60 Aligned_cols=208 Identities=21% Similarity=0.298 Sum_probs=167.3
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC--c-eEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|.... . +.+|+|.++|.+... ..+++.++|++|++.
T Consensus 17 ~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 96 (251)
T PRK14244 17 SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPN 96 (251)
T ss_pred CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCcc
Confidence 35699999999999999999999999999999999997531 1 358999999987532 134567999999988
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+++. |++||+.+....+. ........++.++++++.+++.+....... ..+..||||||||++||++|+.+|++|+|
T Consensus 97 ~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~Gq~qrv~laral~~~p~llll 173 (251)
T PRK14244 97 PFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLK-DSAFELSGGQQQRLCIARAIAVKPTMLLM 173 (251)
T ss_pred cccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhh-cChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8875 99999988643331 111223334567889999998652211111 12457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 174 DEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 232 (251)
T PRK14244 174 DEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIVEYNTT 232 (251)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999985 4899999999986 46678999999985 799998874
No 332
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-33 Score=322.66 Aligned_cols=204 Identities=25% Similarity=0.323 Sum_probs=168.9
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC---CCceEEEEccCCC-CCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAEM 224 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 224 (1419)
.+|+|+|+++++||+++|+||||||||||+++|+|.+++. +|+|.++|+++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 5899999999999999999999999999999999998775 999999999875432 2457999999974 67888
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
|+++|+.|.....+.. . ......++.+++.+||.+..|+.+
T Consensus 100 ~v~~~~~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVP--Y--------------------------------DEMHRRVSEALKQVDMLERADYEP----- 140 (269)
T ss_pred cHHHHHHhhHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCchhhhCCc-----
Confidence 9999998864322110 0 001123567889999987766554
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
+.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tiiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSE-HNITIISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCchHHhc-CCEEEEEECC
Confidence 469999999999999999999999999999999999999999999988653 24566667788888875 9999999999
Q ss_pred eEEEEcChhhHH
Q 000562 385 QIVYQGPRVSVL 396 (1419)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1419)
++++.|+++++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 333
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.1e-33 Score=360.84 Aligned_cols=206 Identities=22% Similarity=0.313 Sum_probs=165.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1419)
++|+|+|++++|||.++|+|+||||||||+++|+|+++|. +|+|.+||+++++... ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 5999999999999999999999999999999999999886 8999999999887654 5789999999997765 9
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
++|||.++.. ...+.+.+ .++... .++.++ .|++..||.+|+. ..
T Consensus 431 i~~NI~~~~~-----~~d~~i~~------------------a~~~~g---------l~~~i~--~lp~Gldt~i~e~-g~ 475 (592)
T PRK10790 431 FLANVTLGRD-----ISEEQVWQ------------------ALETVQ---------LAELAR--SLPDGLYTPLGEQ-GN 475 (592)
T ss_pred HHHHHHhCCC-----CCHHHHHH------------------HHHHcC---------cHHHHH--hccccccccccCC-CC
Confidence 9999988531 00111111 111110 111122 2567789999974 45
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
+||||||||++|||||+++|+|++||||||+||+.++.+|.+.|++... ++|+|+ ++|.. +....+|+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~tvIi-vtHr~-~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HTTLVV-IAHRL-STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CCEEEE-Eecch-HHHHhCCEEEEEECCE
Confidence 7999999999999999999999999999999999999999999998753 345554 55554 5566799999999999
Q ss_pred EEEEcChhhHHH
Q 000562 386 IVYQGPRVSVLD 397 (1419)
Q Consensus 386 iv~~G~~~~~~~ 397 (1419)
++..|+++++.+
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999863
No 334
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-34 Score=321.81 Aligned_cols=194 Identities=23% Similarity=0.297 Sum_probs=165.5
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHHH
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRE 228 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 228 (1419)
++|+|+|+.+++|++++|+|||||||||||++|+|.++++ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 5999999999999999999999999999999999998775 9999999976542 2467999999998888899999
Q ss_pred HHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCC
Q 000562 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1419)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 308 (1419)
|+.++.. . . ....++.+++.+||.+..+..+ ..||
T Consensus 101 nl~~~~~----~-------~-----------------------------~~~~~~~~l~~~gl~~~~~~~~-----~~LS 135 (257)
T PRK11247 101 NVGLGLK----G-------Q-----------------------------WRDAALQALAAVGLADRANEWP-----AALS 135 (257)
T ss_pred HHHhccc----c-------h-----------------------------HHHHHHHHHHHcCChhHhcCCh-----hhCC
Confidence 9987421 0 0 0112566788999987666554 4699
Q ss_pred hHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 000562 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1419)
Q Consensus 309 GGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~ 388 (1419)
|||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+.. +.+|+.++|+..++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQH-GFTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999999999999999999999999886543 4566778899999999999999999999999
Q ss_pred EcChh
Q 000562 389 QGPRV 393 (1419)
Q Consensus 389 ~G~~~ 393 (1419)
.|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88653
No 335
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-34 Score=313.12 Aligned_cols=202 Identities=24% Similarity=0.308 Sum_probs=182.2
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------c-cccceEEEEccCCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------E-TFARISGYCEQNDIHS 914 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~-~~~~~~gyv~Q~d~~~ 914 (1419)
..-++|+|++++.||++.|||-||||||||+++|.+... +..|+|.++|.++.. . -+++.++.|+|+..++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 456789999999999999999999999999999999876 679999999987532 1 2346799999999999
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDE 994 (1419)
|+.||.||..|+..++ ..+.+++++++.+.++.+||.+..+.+. ++||||+||||.+||||+.+|+||+|||
T Consensus 119 PhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999999998776 4567888999999999999999998874 5899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|.|.|||--+..+++-|.++.++ ++|||++|||.+ |.+..-|||.+|+ +|+++..|.+.
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~ 250 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPE 250 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHH
Confidence 99999999999999999998654 899999999997 7889999999998 58999999864
No 336
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-34 Score=327.56 Aligned_cols=206 Identities=26% Similarity=0.352 Sum_probs=171.4
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC-----CCCceEEEEccCCC-CCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDW-QVA 222 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~-~~~ 222 (1419)
.+|+|+|++|++||+++|+||||||||||+++|+|.+++. +|+|.++|+++... ..++.++|++|++. .+.
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 96 (283)
T PRK13636 20 HALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLF 96 (283)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhc
Confidence 5999999999999999999999999999999999998775 99999999987421 12357999999963 345
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
..||+||+.++....+.. . .+....++++++.+||.+..|+.+
T Consensus 97 ~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 139 (283)
T PRK13636 97 SASVYQDVSFGAVNLKLP----------E------------------------DEVRKRVDNALKRTGIEHLKDKPT--- 139 (283)
T ss_pred cccHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCChhhhhCCc---
Confidence 689999998754322110 0 001224678899999987776655
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+.||++++|+
T Consensus 140 --~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tillvsH~~~~~~~~~dri~~l~ 216 (283)
T PRK13636 140 --HCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKEL-GLTIIIATHDIDIVPLYCDNVFVMK 216 (283)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 4699999999999999999999999999999999999999999999987642 4567778999999999999999999
Q ss_pred CCeEEEEcChhhHHH
Q 000562 383 EGQIVYQGPRVSVLD 397 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1419)
+|++++.|+.+++..
T Consensus 217 ~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 217 EGRVILQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCHHHHhc
Confidence 999999999888653
No 337
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-35 Score=329.21 Aligned_cols=209 Identities=24% Similarity=0.377 Sum_probs=171.4
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC---CCceEEEEccCCCCCCC
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 223 (1419)
++++|+||||++.||+.+|++||||+||||+|+.|-...+-+ +|.|+++|++++... .++.+|.||||..+|.
T Consensus 550 ~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFN- 625 (790)
T KOG0056|consen 550 GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFN- 625 (790)
T ss_pred CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCcceeec-
Confidence 457999999999999999999999999999999999988765 999999999986543 3578999999998665
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
.|+..||.|+.. +..-+.+.+++ ||+ ...| +++++++.++|+||+++
T Consensus 626 dTI~yNIryak~----~AsneevyaAA------------------kAA--------~IHd---rIl~fPegY~t~VGERG 672 (790)
T KOG0056|consen 626 DTILYNIRYAKP----SASNEEVYAAA------------------KAA--------QIHD---RILQFPEGYNTRVGERG 672 (790)
T ss_pred ceeeeheeecCC----CCChHHHHHHH------------------HHh--------hHHH---HHhcCchhhhhhhhhcc
Confidence 599999988632 11111111111 111 1122 36889999999999988
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
.+ |||||||||+|||+++..|.+++|||.||+||..+.+.|..+|.+++. ++|+|+.. |..+.+ --+|.|+++++
T Consensus 673 Lk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvA-HRLSTi-vnAD~ILvi~~ 747 (790)
T KOG0056|consen 673 LK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVA-HRLSTI-VNADLILVISN 747 (790)
T ss_pred cc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEe-eeehhe-ecccEEEEEeC
Confidence 86 999999999999999999999999999999999999999999999985 57777744 444433 45799999999
Q ss_pred CeEEEEcChhhHHH
Q 000562 384 GQIVYQGPRVSVLD 397 (1419)
Q Consensus 384 G~iv~~G~~~~~~~ 397 (1419)
|+|++.|.++|++.
T Consensus 748 G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 748 GRIVERGRHEELLK 761 (790)
T ss_pred CeEeecCcHHHHHh
Confidence 99999999999874
No 338
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=6.9e-34 Score=310.02 Aligned_cols=171 Identities=54% Similarity=0.916 Sum_probs=152.0
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCC--CCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccH
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK--TGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~--~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|.+......++.++|++|++.+++.+|+
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t~ 99 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLTV 99 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCEeCchHhhhheEEEccCcccCCCCCcH
Confidence 46999999999999999999999999999999999986 5 5689999999986544456789999999988889999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+|++.+...++ .||||||||++|||+|+.+|++++|||||+||
T Consensus 100 ~~~i~~~~~~~-------------------------------------~LS~G~~qrv~laral~~~p~illlDEP~~~L 142 (194)
T cd03213 100 RETLMFAAKLR-------------------------------------GLSGGERKRVSIALELVSNPSLLFLDEPTSGL 142 (194)
T ss_pred HHHHHHHHHhc-------------------------------------cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCC
Confidence 99997642110 49999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
|+.++..+.+.|++++++|+|||+++|+++.++.+.+|++++|++ |++++.|
T Consensus 143 D~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 143 DSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 999999999999999877999999999986557778999999985 7887754
No 339
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=329.89 Aligned_cols=217 Identities=16% Similarity=0.198 Sum_probs=172.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC-CCeeeEEEECCccCCCCCC-------CceEEEEccCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1419)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++. .+.+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 46999999999999999999999999999999999998642 2358999999998765432 246999999975
Q ss_pred --CCCCCCHHHHHHHhhhhcCC-CCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccc
Q 000562 220 --QVAEMTVRETLDFAGQCQGV-GSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCAD 296 (1419)
Q Consensus 220 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 296 (1419)
+.+.+||.+++.+....... +..+. . ..+....+.++|+.+||++..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~~----------------~-------------~~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWWQ----------------R-------------FGWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhccccccc----------------c-------------HHHHHHHHHHHHHHCCCCChHH
Confidence 57889999999753221000 00000 0 0001234678899999975321
Q ss_pred ccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcC
Q 000562 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1419)
Q Consensus 297 t~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 376 (1419)
+-+.....|||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+.. +++++.++|+...+.+++|
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNN-NTTILLISHDLQMLSQWAD 227 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCC
Confidence 1123455799999999999999999999999999999999999999999999987643 5677779999999999999
Q ss_pred eEEEEcCCeEEEEcChhhHH
Q 000562 377 DVILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 377 ~vilL~~G~iv~~G~~~~~~ 396 (1419)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999988764
No 340
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-34 Score=325.78 Aligned_cols=214 Identities=23% Similarity=0.281 Sum_probs=171.8
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC---ceEEEEEEECC
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 892 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 892 (1419)
.+.++|+++.. +.+.+|+|+|++|++||+++|+||||||||||+++|+|..+. .+.+|+|.++|
T Consensus 13 ~l~i~nl~~~~-------------~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g 79 (269)
T PRK14259 13 IISLQNVTISY-------------GTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDG 79 (269)
T ss_pred eEEEEeEEEEE-------------CCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 46666665543 235699999999999999999999999999999999997541 13589999999
Q ss_pred ccCC-----cccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc----ccCCcccC
Q 000562 893 YPKR-----QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGL 963 (1419)
Q Consensus 893 ~~~~-----~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~ 963 (1419)
.+.. ...+++.++|++|++.+++ .||+||+.+.+..+. .. ...++.++++++.+++.. ..+.
T Consensus 80 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~---- 150 (269)
T PRK14259 80 TDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKLNE---- 150 (269)
T ss_pred EEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhhCC----
Confidence 8753 1234567999999998887 499999988764331 11 122345677888887742 2232
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000562 964 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1419)
Q Consensus 964 ~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1043 (1419)
.+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 151 -~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 227 (269)
T PRK14259 151 -SGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFFN 227 (269)
T ss_pred -CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEe
Confidence 2457999999999999999999999999999999999999999999999864 799999999986 5778999999998
Q ss_pred c----------CCEEEEeCCC
Q 000562 1044 R----------GGELIYAGPL 1054 (1419)
Q Consensus 1044 ~----------gG~~~~~G~~ 1054 (1419)
+ +|++++.|+.
T Consensus 228 ~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 228 AEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred ccccccccccccceEEEeCCH
Confidence 5 3678999875
No 341
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-34 Score=319.61 Aligned_cols=202 Identities=26% Similarity=0.394 Sum_probs=166.6
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 224 (1419)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 95 (237)
T PRK11614 19 QALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRM 95 (237)
T ss_pred eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCC
Confidence 5999999999999999999999999999999999998775 9999999998765432 35699999999889889
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHh-CCcccccccccCcc
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL-GLDTCADTLVGDEM 303 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~~ 303 (1419)
||+||+.++.... . .+ + ....++.+++.+ +|.+..++.+
T Consensus 96 tv~~~l~~~~~~~--~--~~---~-----------------------------~~~~~~~~l~~~~~l~~~~~~~~---- 135 (237)
T PRK11614 96 TVEENLAMGGFFA--E--RD---Q-----------------------------FQERIKWVYELFPRLHERRIQRA---- 135 (237)
T ss_pred cHHHHHHHhhhcc--C--hh---H-----------------------------HHHHHHHHHHHHHHHHHHHhCch----
Confidence 9999998753211 0 00 0 011234455666 4655444433
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
+.|||||||||+||||++.+|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.+++|++++|++
T Consensus 136 -~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l~~ 212 (237)
T PRK11614 136 -GTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQ--GMTIFLVEQNANQALKLADRGYVLEN 212 (237)
T ss_pred -hhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCcHHHHHhhCCEEEEEeC
Confidence 469999999999999999999999999999999999999999999998653 45566688999999999999999999
Q ss_pred CeEEEEcChhhHH
Q 000562 384 GQIVYQGPRVSVL 396 (1419)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1419)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (237)
T PRK11614 213 GHVVLEDTGDALL 225 (237)
T ss_pred CEEEeeCCHHHHh
Confidence 9999999988763
No 342
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-34 Score=325.73 Aligned_cols=203 Identities=24% Similarity=0.353 Sum_probs=169.5
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCC-CCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDW-QVAE 223 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~-~~~~ 223 (1419)
.+|+|||++|++||+++|+|||||||||||++|+|.+++. +|+|.++|.++..... ++.++|++|++. .+..
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 5999999999999999999999999999999999998775 9999999998764322 357999999975 4677
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
.||+||+.|+....+.. . .+....++.+++.+||++..++.++
T Consensus 93 ~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~--- 135 (274)
T PRK13644 93 RTVEEDLAFGPENLCLP----------P------------------------IEIRKRVDRALAEIGLEKYRHRSPK--- 135 (274)
T ss_pred chHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCHHHhcCCcc---
Confidence 89999998764322110 0 0012246778899999887776654
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. .+++|+.++|+..++ ..+|+|++|++
T Consensus 136 --~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~~tH~~~~~-~~~d~v~~l~~ 210 (274)
T PRK13644 136 --TLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE--KGKTIVYITHNLEEL-HDADRIIVMDR 210 (274)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHH-hhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999864 256677788888888 56999999999
Q ss_pred CeEEEEcChhhHH
Q 000562 384 GQIVYQGPRVSVL 396 (1419)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1419)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999988764
No 343
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=332.87 Aligned_cols=210 Identities=16% Similarity=0.210 Sum_probs=168.4
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC--ceEEEEEEECCccCCc---cc----ccceEEEEccCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GIIEGDIYISGYPKRQ---ET----FARISGYCEQND 911 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~~~~G~i~i~g~~~~~---~~----~~~~~gyv~Q~d 911 (1419)
...+|+|||++|++||++||+|+||||||||+++|+|..+. .+.+|+|.++|.++.. .. +++.++||+|++
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~ 98 (330)
T PRK15093 19 WVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEP 98 (330)
T ss_pred CEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCc
Confidence 35799999999999999999999999999999999998642 2468999999987532 11 234699999997
Q ss_pred C--CCCCccHHHHHHHHhhhcCCCC---CcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000562 912 I--HSPGLTVLESLLFSAWLRLPSE---IELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1419)
Q Consensus 912 ~--~~~~lTv~E~l~f~a~lr~~~~---~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~ 986 (1419)
. +.|.+||.+++.+......... ....+.++.+.++++.++|.+..+.. ...+..|||||||||+||+||+.+
T Consensus 99 ~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~--~~~p~~LSgG~~QRv~iArAL~~~ 176 (330)
T PRK15093 99 QSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAM--RSFPYELTEGECQKVMIAIALANQ 176 (330)
T ss_pred chhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHH--hCCchhCCHHHHHHHHHHHHHHCC
Confidence 5 5788999999976422110000 11123445788999999997532211 112458999999999999999999
Q ss_pred CCcceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 987 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+||++||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|++++|.+ |+++..|+.
T Consensus 177 P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dri~vm~~-G~ive~g~~ 243 (330)
T PRK15093 177 PRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADKINVLYC-GQTVETAPS 243 (330)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999999999999999874 899999999976 46678999999985 899999985
No 344
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=7.2e-34 Score=354.64 Aligned_cols=207 Identities=27% Similarity=0.369 Sum_probs=174.9
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc----cccceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d~~~~~ 916 (1419)
++.+|+|+|+++++||++||+|||||||||||++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.
T Consensus 16 ~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 16 GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 4579999999999999999999999999999999999876 4589999999875321 124569999999988999
Q ss_pred ccHHHHHHHHhhhcCC-CCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 917 LTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
+||+|++.++...+.. ......+.++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+||||
T Consensus 94 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEP 168 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSIGEQQMVEIAKVLSFESKVIIMDEP 168 (501)
T ss_pred CcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999886432211 11122334456889999999988777654 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
|+|||+.++..+++.|+++++.|.|||+++|+++ ++.+.+|++++|++ |+++..|+..+
T Consensus 169 t~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 227 (501)
T PRK10762 169 TDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAEREVAD 227 (501)
T ss_pred cCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEecCcCc
Confidence 9999999999999999999877999999999986 57788999999985 79999998764
No 345
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.2e-33 Score=317.13 Aligned_cols=207 Identities=21% Similarity=0.264 Sum_probs=168.1
Q ss_pred eeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC-CCeeeEEEECCccCCCCCC-CceEEEEccCCC--CCCCCC
Q 000562 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFVP-PRTSAYVSQQDW--QVAEMT 225 (1419)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~lT 225 (1419)
+|+|+|+++++|++++|+||||||||||+++|+|.++|. .+.+|+|.++|+++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 589999999999999999999999999999999998761 0139999999998765433 257999999974 456789
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcc---cccccccCc
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT---CADTLVGDE 302 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~vg~~ 302 (1419)
+.|++.+.....+.. . ......++++++.+||++ ..++.
T Consensus 81 ~~~~~~~~~~~~~~~---------~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~---- 122 (230)
T TIGR02770 81 MGNHAIETLRSLGKL---------S-------------------------KQARALILEALEAVGLPDPEEVLKKY---- 122 (230)
T ss_pred HHHHHHHHHHHcCcc---------H-------------------------HHHHHHHHHHHHHcCCCchHHHHhCC----
Confidence 999997754321100 0 001224677899999973 33443
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
+..|||||||||+||||++.+|++++|||||+|||..+...+.+.|+++++. .+++|+.++|+.+++..++|++++|+
T Consensus 123 -~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 123 -PFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQL-FGTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred -hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4569999999999999999999999999999999999999999999998653 35667778899999999999999999
Q ss_pred CCeEEEEcChhhHH
Q 000562 383 EGQIVYQGPRVSVL 396 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1419)
+|+++..|+.+++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999987764
No 346
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.2e-33 Score=316.81 Aligned_cols=201 Identities=26% Similarity=0.320 Sum_probs=166.3
Q ss_pred eecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHHHHH
Q 000562 151 LDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETL 230 (1419)
Q Consensus 151 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 230 (1419)
|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|+++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 58999999999999999999999999999999998775 9999999998765332 248999999888999999999
Q ss_pred HHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCChH
Q 000562 231 DFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGG 310 (1419)
Q Consensus 231 ~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 310 (1419)
.++....... .+ . .+....++.+++.+||++..++.++ .||||
T Consensus 76 ~~~~~~~~~~--~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPD--LS------K------------------------SERRAIVEEHIALVGLTEAADKRPG-----QLSGG 118 (230)
T ss_pred HHHHHhcccC--CC------H------------------------HHHHHHHHHHHHHcCCHHHHcCChh-----hCCHH
Confidence 8753210000 00 0 0012235678899999877776654 59999
Q ss_pred HhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEc
Q 000562 311 QKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQG 390 (1419)
Q Consensus 311 qkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G 390 (1419)
|||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEH-RVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 9999999999999999999999999999999999999999887543 456777889999999999999999999999988
Q ss_pred Chhh
Q 000562 391 PRVS 394 (1419)
Q Consensus 391 ~~~~ 394 (1419)
+..+
T Consensus 198 ~~~~ 201 (230)
T TIGR01184 198 QILE 201 (230)
T ss_pred Ccee
Confidence 6544
No 347
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.7e-33 Score=318.56 Aligned_cols=211 Identities=24% Similarity=0.353 Sum_probs=172.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1419)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 36999999999999999999999999999999999998775 9999999988754432 2469999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
+||+||+.++..... ..+...... ...+....++++++.+||++..++.++
T Consensus 92 ~tv~~nl~~~~~~~~--~~~~~~~~~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~~--- 142 (242)
T TIGR03411 92 LTVFENLELALPRDK--SVFASLFFR------------------------LSAEEKDRIEEVLETIGLADEADRLAG--- 142 (242)
T ss_pred CCHHHHHHHhhhccc--ccccccccc------------------------cHHHHHHHHHHHHHHcCCchhhcCChh---
Confidence 999999988543110 000000000 000112346788999999877666554
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
.|||||||||+||||++.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|+..++.++||+|++|++
T Consensus 143 --~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 143 --LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999864 3 5677788999999999999999999
Q ss_pred CeEEEEcChhhH
Q 000562 384 GQIVYQGPRVSV 395 (1419)
Q Consensus 384 G~iv~~G~~~~~ 395 (1419)
|+++++|+.+++
T Consensus 218 g~~~~~~~~~~~ 229 (242)
T TIGR03411 218 GSVLAEGSLDQV 229 (242)
T ss_pred CeEEeeCCHHHH
Confidence 999999987765
No 348
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-33 Score=323.52 Aligned_cols=207 Identities=27% Similarity=0.356 Sum_probs=170.1
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC---CCceEEEEccCCC-CCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAEM 224 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 224 (1419)
++|+|+|++|++||+++|+||||||||||+++|+|.+++....+|+|.++|.++.... .++.++|++|++. .++..
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 21 PALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 5999999999999999999999999999999999999775222499999999876432 2357999999974 57789
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||+||+.|.....+.. . .+...+++.+++.+||++..++.+
T Consensus 101 tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~L~~~~~~~~----- 141 (282)
T PRK13640 101 TVGDDVAFGLENRAVP----------R------------------------PEMIKIVRDVLADVGMLDYIDSEP----- 141 (282)
T ss_pred CHHHHHHhhHHhCCCC----------H------------------------HHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 9999998754322100 0 011224677899999987666554
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
+.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++.. +++|+.++|+..++ ..+|++++|++|
T Consensus 142 ~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvli~tH~~~~~-~~~d~i~~l~~G 219 (282)
T PRK13640 142 ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKN-NLTVISITHDIDEA-NMADQVLVLDDG 219 (282)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEECC
Confidence 5699999999999999999999999999999999999999999999987532 45666678888887 579999999999
Q ss_pred eEEEEcChhhHH
Q 000562 385 QIVYQGPRVSVL 396 (1419)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1419)
++++.|+++++.
T Consensus 220 ~i~~~g~~~~~~ 231 (282)
T PRK13640 220 KLLAQGSPVEIF 231 (282)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 349
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.80 Aligned_cols=206 Identities=23% Similarity=0.290 Sum_probs=166.3
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC--c-eEEEEEEECCccCCc-----ccccceEEEEccCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~ 913 (1419)
+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|.++.. ...++.+||++|++.+
T Consensus 25 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 104 (259)
T PRK14274 25 HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNP 104 (259)
T ss_pred eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCcc
Confidence 4699999999999999999999999999999999997541 1 147999999987632 2345679999999888
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
++. |++||+.+....+.. ...++..+.++++++.+++.+....... ....+||||||||++||++|+.+|++++||
T Consensus 105 ~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~LS~Gq~qrv~laral~~~p~llllD 180 (259)
T PRK14274 105 FPQ-SIFDNVAYGPRIHGT--KNKKKLQEIVEKSLKDVALWDEVKDRLH-TQALSLSGGQQQRLCIARALATNPDVLLMD 180 (259)
T ss_pred ccc-CHHHHHHhHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhhhhhh-CCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 875 999999886543211 1223334567788999888532111111 124579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 181 EPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 238 (259)
T PRK14274 181 EPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GELVECNDT 238 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 99999999999999999999865 799999999986 56788999999985 899999885
No 350
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-34 Score=327.04 Aligned_cols=202 Identities=23% Similarity=0.299 Sum_probs=169.9
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCce-EEEEEEECCccCCc---ccccceEEEEccCCC-CCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGI-IEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPG 916 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~-~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~-~~~~ 916 (1419)
+.+|+|||++|++||++||+||||||||||+++|+|..++.. ..|+|.++|.+... ...++.+||++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 459999999999999999999999999999999999865211 13899999988643 234567999999974 5678
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
.||+|++.|....+ ....++..+.++++++.++|.+..+..+ +.||||||||++||++|+.+|++|+|||||
T Consensus 100 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS~G~~qrv~laral~~~P~llllDEPt 171 (282)
T PRK13640 100 ATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLSGGQKQRVAIAGILAVEPKIIILDEST 171 (282)
T ss_pred CCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCc
Confidence 89999998764322 2234445567889999999988776653 589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|||+.++..+.+.|++++++ |+|||+++|+++. + +.+|++++|++ |++++.|+.
T Consensus 172 ~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~~~g~~ 227 (282)
T PRK13640 172 SMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLLAQGSP 227 (282)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999865 8999999999863 4 57999999985 799999985
No 351
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=321.45 Aligned_cols=203 Identities=23% Similarity=0.274 Sum_probs=167.0
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc---eEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 16 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 95 (251)
T PRK14270 16 EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPN 95 (251)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCC
Confidence 356999999999999999999999999999999999975421 257999999987632 133567999999988
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ 988 (1419)
+++ .|++||+.|....... ....+..++++++++.+++.+ ..+. .+..||+|||||++||++|+.+|+
T Consensus 96 ~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~ 167 (251)
T PRK14270 96 PFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKK-----SALKLSGGQQQRLCIARTIAVKPD 167 (251)
T ss_pred cCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhC-----CcccCCHHHHHHHHHHHHHhcCCC
Confidence 887 8999999887543311 122333456788899998742 2222 245899999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|++|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 168 llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 230 (251)
T PRK14270 168 VILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFLM-GDLIEFNKT 230 (251)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEEC-CeEEEeCCH
Confidence 9999999999999999999999999876 699999999986 56788999999985 799999885
No 352
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.2e-33 Score=357.75 Aligned_cols=200 Identities=28% Similarity=0.449 Sum_probs=164.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1419)
++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|. .|
T Consensus 354 ~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~t 429 (574)
T PRK11160 354 PVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-AT 429 (574)
T ss_pred cceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-cc
Confidence 5999999999999999999999999999999999999876 9999999999887654 467999999998665 69
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCC------cccccccc
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL------DTCADTLV 299 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~dt~v 299 (1419)
++|||.++.. ....+ .+.+.++..|+ ++..||.|
T Consensus 430 i~~Ni~~~~~----~~~~~------------------------------------~i~~al~~~~l~~~i~~p~GldT~v 469 (574)
T PRK11160 430 LRDNLLLAAP----NASDE------------------------------------ALIEVLQQVGLEKLLEDDKGLNAWL 469 (574)
T ss_pred HHHHhhcCCC----ccCHH------------------------------------HHHHHHHHcCCHHHHcCccccCchh
Confidence 9999987531 00000 11222233332 56789999
Q ss_pred cCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000562 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1419)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 379 (1419)
|+. .+.||||||||++||||++++|++++||||||+||+.++..|.+.|++..+ ++|+|+ ++|..+.+ ..+|+|+
T Consensus 470 ge~-g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~--~~tvii-itHr~~~~-~~~d~i~ 544 (574)
T PRK11160 470 GEG-GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQ--NKTVLM-ITHRLTGL-EQFDRIC 544 (574)
T ss_pred cCC-CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC--CCEEEE-EecChhHH-HhCCEEE
Confidence 975 567999999999999999999999999999999999999999999998753 445554 66665555 5699999
Q ss_pred EEcCCeEEEEcChhhHHH
Q 000562 380 LLSEGQIVYQGPRVSVLD 397 (1419)
Q Consensus 380 lL~~G~iv~~G~~~~~~~ 397 (1419)
+|++|++++.|+++++.+
T Consensus 545 ~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 545 VMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEeCCeEEEeCCHHHHHh
Confidence 999999999999998864
No 353
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.7e-33 Score=322.52 Aligned_cols=207 Identities=23% Similarity=0.313 Sum_probs=170.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC------CCceEEEEccCC--C
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--W 219 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~ 219 (1419)
+.+|+|+|+++++||+++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++ .
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 46999999999999999999999999999999999998775 999999999876432 235699999996 4
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc-cccccc
Q 000562 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1419)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1419)
+.+.+||+||+.+....... .. .......++.+++.+||+ ...+..
T Consensus 101 ~~~~~tv~~~l~~~~~~~~~---~~------------------------------~~~~~~~~~~~l~~~gl~~~~~~~~ 147 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLTS---LD------------------------------ESEQKARIAELLDMVGLRSEDADKL 147 (265)
T ss_pred cCCCCCHHHHHHHHHHHhcC---CC------------------------------HHHHHHHHHHHHHHcCCChhhhhCC
Confidence 56789999999765321100 00 000122467788999996 555554
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
+ +.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+...+.+++|++
T Consensus 148 ~-----~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d~i 221 (265)
T TIGR02769 148 P-----RQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAF-GTAYLFITHDLRLVQSFCQRV 221 (265)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHHHhcEE
Confidence 4 4699999999999999999999999999999999999999999999987532 466777889999999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000562 379 ILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1419)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 222 AVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEeCCEEEEECCHHHHc
Confidence 999999999999988764
No 354
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.9e-33 Score=314.11 Aligned_cols=197 Identities=26% Similarity=0.360 Sum_probs=167.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCCHH
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1419)
.++|+|+|+.+++||+++|+|||||||||||++|+|.++|. +|+|.++|+++.... .+.++|++|++.+++.+|++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 36999999999999999999999999999999999998775 999999998765322 35799999999888889999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000562 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1419)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1419)
||+.+.....+. .+..+..+++.+||++..|..++ .|
T Consensus 89 ~~~~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~L 125 (223)
T TIGR03740 89 ENLKVHTTLLGL--------------------------------------PDSRIDEVLNIVDLTNTGKKKAK-----QF 125 (223)
T ss_pred HHHHHHHHHcCC--------------------------------------CHHHHHHHHHHcCCcHHHhhhHh-----hC
Confidence 999875432110 01135667889999877666554 59
Q ss_pred ChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 000562 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1419)
Q Consensus 308 SGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv 387 (1419)
|||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++. +.+|+.++|+..++.+.+|++++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQ--GITVILSSHILSEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHhcCEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999998642 456667888889999999999999999999
Q ss_pred EEcChh
Q 000562 388 YQGPRV 393 (1419)
Q Consensus 388 ~~G~~~ 393 (1419)
+.|++.
T Consensus 204 ~~~~~~ 209 (223)
T TIGR03740 204 YQGKIN 209 (223)
T ss_pred EecChh
Confidence 999764
No 355
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-33 Score=326.37 Aligned_cols=205 Identities=19% Similarity=0.305 Sum_probs=167.0
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCC----C----CCCceEEEEccCCC-
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKE----F----VPPRTSAYVSQQDW- 219 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~----~----~~~~~~~yv~Q~d~- 219 (1419)
.+|+|+|+++++||+++|+|||||||||||++|+|.+++. +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 5999999999999999999999999999999999998775 8999999987642 1 12457999999973
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc-cccccc
Q 000562 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1419)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1419)
.+...||+||+.|+....+.. . . +....++.+++.+||+ +..++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~--~--------~------------------------~~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGEN--K--------Q------------------------EAYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCC--H--------H------------------------HHHHHHHHHHHHcCCChhHhcCC
Confidence 233469999998854321100 0 0 0112356778899995 455554
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
+ +.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+++|++
T Consensus 148 ~-----~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 148 P-----FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKE-YKKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred h-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEE
Confidence 4 469999999999999999999999999999999999999999999988753 2566777889999999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000562 379 ILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1419)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999987763
No 356
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.5e-33 Score=334.68 Aligned_cols=199 Identities=28% Similarity=0.470 Sum_probs=170.3
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC-------CCCceEEEEccCCCCCCCCC
Q 000562 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 225 (1419)
|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++++|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 999999999999999999999999999999998875 99999999887532 12467999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+||+.|+.+... . . +....++++++.+||++..|+.++
T Consensus 92 v~enl~~~~~~~~--~----------~------------------------~~~~~~~~~l~~~gL~~~~~~~~~----- 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P----------S------------------------ERRISFERVIELLGIGHLLGRLPG----- 130 (354)
T ss_pred HHHHHHHHhhccC--h----------h------------------------HHHHHHHHHHHHcCChhHhcCChh-----
Confidence 9999988643110 0 0 012236778999999887776654
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEF-GIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999987643 4567778899999999999999999999
Q ss_pred EEEEcChhhHH
Q 000562 386 IVYQGPRVSVL 396 (1419)
Q Consensus 386 iv~~G~~~~~~ 396 (1419)
++..|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988764
No 357
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.2e-33 Score=315.46 Aligned_cols=195 Identities=23% Similarity=0.319 Sum_probs=164.1
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC------CCceEEEEccCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQVA 222 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 222 (1419)
++|+|+|+++++|++++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|++.+++
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (222)
T PRK10908 16 QALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLM 92 (222)
T ss_pred eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccccc
Confidence 5999999999999999999999999999999999998775 999999999875432 2357999999998888
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
.+||+||+.+.....+.. . ++....++.+++.+||++..++.+
T Consensus 93 ~~tv~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 135 (222)
T PRK10908 93 DRTVYDNVAIPLIIAGAS--G--------------------------------DDIRRRVSAALDKVGLLDKAKNFP--- 135 (222)
T ss_pred cccHHHHHHhHHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCChhhhhCCc---
Confidence 999999998764322110 0 001123567788999987666554
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
..|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+. +++++.++|+..++.+.+|+|++|+
T Consensus 136 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l~ 211 (222)
T PRK10908 136 --IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRV--GVTVLMATHDIGLISRRSYRMLTLS 211 (222)
T ss_pred --hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 469999999999999999999999999999999999999999999998653 4667778999999999999999999
Q ss_pred CCeEE
Q 000562 383 EGQIV 387 (1419)
Q Consensus 383 ~G~iv 387 (1419)
+|+++
T Consensus 212 ~G~i~ 216 (222)
T PRK10908 212 DGHLH 216 (222)
T ss_pred CCEEc
Confidence 99985
No 358
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-33 Score=320.82 Aligned_cols=206 Identities=29% Similarity=0.477 Sum_probs=171.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
..+|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 35999999999999999999999999999999999998775 9999999987754322 35689999998877889
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||+||+.++....... . ......++.+++.+||++..++.++
T Consensus 92 tv~e~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 133 (258)
T PRK13548 92 TVEEVVAMGRAPHGLS--R--------------------------------AEDDALVAAALAQVDLAHLAGRDYP---- 133 (258)
T ss_pred CHHHHHHhhhcccCCC--c--------------------------------HHHHHHHHHHHHHcCCHhHhcCCcc----
Confidence 9999998753211100 0 0011235678899999876676654
Q ss_pred CCCChHHhHHHHHHHHHh------CCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 305 KGISGGQKKRLTTGELLV------GPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~------~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
.|||||||||+||+||+ .+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|+|
T Consensus 134 -~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i 211 (258)
T PRK13548 134 -QLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHER-GLAVIVVLHDLNLAARYADRI 211 (258)
T ss_pred -cCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhcCEE
Confidence 59999999999999999 5999999999999999999999999999987333 456777889999999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000562 379 ILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1419)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999887653
No 359
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=321.43 Aligned_cols=206 Identities=24% Similarity=0.298 Sum_probs=164.9
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCC--C-ceEEEEEEECCccCCc-----ccccceEEEEccCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~ 913 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.++|.+... ..+++.++|++|++.+
T Consensus 18 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 97 (252)
T PRK14239 18 KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNP 97 (252)
T ss_pred eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCcc
Confidence 469999999999999999999999999999999999632 1 1247999999987532 2345679999999887
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
++ .||+||+.+....+. . ...+..++.++++++.+++.+...... ...+..||||||||++||++|+.+|++|+||
T Consensus 98 ~~-~tv~enl~~~~~~~~-~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllD 173 (252)
T PRK14239 98 FP-MSIYENVVYGLRLKG-I-KDKQVLDEAVEKSLKGASIWDEVKDRL-HDSALGLSGGQQQRVCIARVLATSPKIILLD 173 (252)
T ss_pred Cc-CcHHHHHHHHHHHcC-C-CcHHHHHHHHHHHHHHcCCchhHHHHH-hcCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 76 899999988654321 1 112233456778888888743111111 1124579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 174 EPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 231 (252)
T PRK14239 174 EPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFLD-GDLIEYNDT 231 (252)
T ss_pred CCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999865 699999999976 57788999999985 799999875
No 360
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=6.9e-34 Score=367.89 Aligned_cols=206 Identities=24% Similarity=0.367 Sum_probs=162.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
+++|+|+|++++|||.++|+||||||||||+++|+|.++|. +|+|.+||+++++... ++.++||+|++.+| +.
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF-~g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLF-SG 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCcccc-cc
Confidence 46999999999999999999999999999999999999886 9999999999887654 47899999999866 56
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
|++|||.++... ...+.+.++ .+... .+..++ .|++..||.+|+. .
T Consensus 570 TIreNI~~g~~~----~~~e~i~~a------------------l~~a~---------l~~~i~--~lp~GldT~ige~-G 615 (711)
T TIGR00958 570 SVRENIAYGLTD----TPDEEIMAA------------------AKAAN---------AHDFIM--EFPNGYDTEVGEK-G 615 (711)
T ss_pred CHHHHHhcCCCC----CCHHHHHHH------------------HHHcC---------CHHHHH--hCCCccCCcccCC-C
Confidence 999999875321 000111111 11100 011111 3567789999965 4
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
.+||||||||++||||++++|+|++||||||+||+.+...|.+ ... . .++|++.++|..+. .+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~-~~~TvIiItHrl~~-i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---R-ASRTVLLIAHRLST-VERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---c-CCCeEEEEeccHHH-HHhCCEEEEEECC
Confidence 6799999999999999999999999999999999999999888 221 2 24455557777654 5779999999999
Q ss_pred eEEEEcChhhHHH
Q 000562 385 QIVYQGPRVSVLD 397 (1419)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1419)
+++++|+++++.+
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999864
No 361
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.2e-34 Score=372.00 Aligned_cols=206 Identities=25% Similarity=0.335 Sum_probs=164.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|. +|+|.+||+++++... ++.++||+|++.+| +.
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLF-EG 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhh-hc
Confidence 36999999999999999999999999999999999999886 9999999999877653 57899999999866 56
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
|++|||.++.. ....+.+.+++ +... .++. .-.|++..||.+|+. .
T Consensus 568 Ti~eNi~l~~~----~~~~~~i~~al------------------~~~~---------l~~~--i~~lp~gl~t~i~e~-G 613 (710)
T TIGR03796 568 TVRDNLTLWDP----TIPDADLVRAC------------------KDAA---------IHDV--ITSRPGGYDAELAEG-G 613 (710)
T ss_pred cHHHHhhCCCC----CCCHHHHHHHH------------------HHhC---------CHHH--HHhCcCcccceeccC-C
Confidence 99999987421 11111111111 1000 1111 123667889999965 4
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
.+||||||||++||||++++|++++||||||+||+.++.+|.+.|++ .++| +|.++|..+. ...+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T-~IiitHrl~~-i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCT-CIIVAHRLST-IRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCE-EEEEecCHHH-HHhCCEEEEEeCC
Confidence 68999999999999999999999999999999999999999999985 2445 4446666554 4669999999999
Q ss_pred eEEEEcChhhHHH
Q 000562 385 QIVYQGPRVSVLD 397 (1419)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1419)
+++..|+++++.+
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999864
No 362
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.7e-33 Score=320.44 Aligned_cols=205 Identities=23% Similarity=0.316 Sum_probs=171.4
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC----------------CCceEE
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----------------PPRTSA 212 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~----------------~~~~~~ 212 (1419)
++|+|+|+++++||+++|+||||||||||+++|+|.+.+. +|+|.++|.++.... .++.++
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 90 (252)
T TIGR03005 14 TVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIG 90 (252)
T ss_pred eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCeE
Confidence 6999999999999999999999999999999999998775 999999998775321 145799
Q ss_pred EEccCCCCCCCCCHHHHHHHhhhh-cCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCC
Q 000562 213 YVSQQDWQVAEMTVRETLDFAGQC-QGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL 291 (1419)
Q Consensus 213 yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL 291 (1419)
|++|++.+++.+||.||+.++... .+.. . .+....++++++.+||
T Consensus 91 ~v~q~~~~~~~~tv~~nl~~~~~~~~~~~-------~---------------------------~~~~~~~~~~l~~~gl 136 (252)
T TIGR03005 91 MVFQSFNLFPHKTVLDNVTEAPVLVLGMA-------R---------------------------AEAEKRAMELLDMVGL 136 (252)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhcCCC-------H---------------------------HHHHHHHHHHHHHcCC
Confidence 999999889999999999875321 0000 0 0011235678899999
Q ss_pred cccccccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHH
Q 000562 292 DTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEA 371 (1419)
Q Consensus 292 ~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~ 371 (1419)
++..+..+ +.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++++.++|+..++
T Consensus 137 ~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~ 210 (252)
T TIGR03005 137 ADKADHMP-----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGFA 210 (252)
T ss_pred hhHhhcCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHH
Confidence 87666544 469999999999999999999999999999999999999999999988753 356777788999999
Q ss_pred HhhcCeEEEEcCCeEEEEcChhhHH
Q 000562 372 YELFDDVILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 372 ~~~~D~vilL~~G~iv~~G~~~~~~ 396 (1419)
.+++|++++|++|++++.|+.+++.
T Consensus 211 ~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 211 REFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999887763
No 363
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=318.85 Aligned_cols=212 Identities=24% Similarity=0.303 Sum_probs=170.1
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCCCC---CCceEEEEccCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 223 (1419)
++|+|+|+++++||+++|+||||||||||+++|+|.+++. .+.+|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~ 96 (250)
T PRK14247 17 EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPN 96 (250)
T ss_pred eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCC
Confidence 5999999999999999999999999999999999998642 235999999999875432 24679999999988899
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
+||+||+.++.+....... . .+....++++++.+||.+..+... +..
T Consensus 97 ~tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~ 143 (250)
T PRK14247 97 LSIFENVALGLKLNRLVKS--------K------------------------KELQERVRWALEKAQLWDEVKDRL-DAP 143 (250)
T ss_pred CcHHHHHHHHHHhccccCC--------H------------------------HHHHHHHHHHHHHcCCCcchhhhh-cCC
Confidence 9999999886432210000 0 001223567888889854211111 233
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
+..|||||||||+|||||+.+|++++|||||+|||+.++.++.+.|+++.+ +++++.++|+..++.+.+|++++|++
T Consensus 144 ~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~i~~l~~ 220 (250)
T PRK14247 144 AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK---DMTIVLVTHFPQQAARISDYVAFLYK 220 (250)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 457999999999999999999999999999999999999999999998853 35677788999999999999999999
Q ss_pred CeEEEEcChhhHH
Q 000562 384 GQIVYQGPRVSVL 396 (1419)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1419)
|++++.|+.+++.
T Consensus 221 G~i~~~g~~~~~~ 233 (250)
T PRK14247 221 GQIVEWGPTREVF 233 (250)
T ss_pred CeEEEECCHHHHH
Confidence 9999999988763
No 364
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-33 Score=317.85 Aligned_cols=211 Identities=22% Similarity=0.272 Sum_probs=169.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCCCC-----CCceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 220 (1419)
+++|+|+|+++++||+++|+|||||||||||++|+|.+++. .+.+|+|.++|.++.... .++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35999999999999999999999999999999999998642 245999999999875321 24579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1419)
++ .||+||+.++....+... + +.....++++++.+||.+..++..
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~~~l~~~i~~~~- 157 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKD--K-------------------------------KVLDEIVETSLKQAALWDQVKDDL- 157 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCC--H-------------------------------HHHHHHHHHHHHHcCCCchhhhhh-
Confidence 76 699999988643211000 0 001123566788888864322222
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 380 (1419)
+...+.||||||||++|||+++.+|++++|||||+|||+.++.++.+.|+++.+ +++|+.++|+.+++.++||++++
T Consensus 158 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~i~~ 234 (267)
T PRK14237 158 HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK---NYTIIIVTHNMQQAARASDYTAF 234 (267)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEecCHHHHHHhcCEEEE
Confidence 245567999999999999999999999999999999999999999999998843 35677788999999999999999
Q ss_pred EcCCeEEEEcChhhHH
Q 000562 381 LSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1419)
|++|++++.|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988763
No 365
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.2e-33 Score=313.20 Aligned_cols=194 Identities=31% Similarity=0.447 Sum_probs=161.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCC-CCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDW-QVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 223 (1419)
+++|+|+|+++++|++++|+|||||||||||++|+|.++++ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999998775 9999999988754321 357899999974 4678
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
+||+||+.++....+... .+....++.+++.+||++..++.+
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 999999987543211000 001123567888999987666555
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.+++|+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE--GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 469999999999999999999999999999999999999999999998753 46677788999999999999999999
Q ss_pred Ce
Q 000562 384 GQ 385 (1419)
Q Consensus 384 G~ 385 (1419)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 366
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.7e-33 Score=321.34 Aligned_cols=205 Identities=22% Similarity=0.272 Sum_probs=169.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC----------------CCCceE
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF----------------VPPRTS 211 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~----------------~~~~~~ 211 (1419)
+++|+|+|+.+++|++++|+||||||||||+++|+|.+++. +|+|.++|.++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 36999999999999999999999999999999999998765 89999999876421 113579
Q ss_pred EEEccCCCCCCCCCHHHHHHHhhh-hcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhC
Q 000562 212 AYVSQQDWQVAEMTVRETLDFAGQ-CQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 290 (1419)
Q Consensus 212 ~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lg 290 (1419)
+|++|++.+++.+||+||+.++.. ..... . .+....+.++++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~-------~---------------------------~~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS-------K---------------------------QEARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC-------H---------------------------HHHHHHHHHHHHHcC
Confidence 999999998989999999987532 11000 0 001223567889999
Q ss_pred Ccccc-cccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChh
Q 000562 291 LDTCA-DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 369 (1419)
Q Consensus 291 L~~~~-dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~ 369 (1419)
|++.. +. ..+.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++. +.+|+.++|+..
T Consensus 141 l~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~--g~tiiivsH~~~ 213 (257)
T PRK10619 141 IDERAQGK-----YPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEE--GKTMVVVTHEMG 213 (257)
T ss_pred CChhhhhC-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhc--CCEEEEEeCCHH
Confidence 97643 43 34579999999999999999999999999999999999999999999998652 566677889999
Q ss_pred HHHhhcCeEEEEcCCeEEEEcChhhHH
Q 000562 370 EAYELFDDVILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 370 ~~~~~~D~vilL~~G~iv~~G~~~~~~ 396 (1419)
++.++||+|++|++|++++.|+.+++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 999999999999999999999987763
No 367
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2.8e-33 Score=317.25 Aligned_cols=213 Identities=22% Similarity=0.279 Sum_probs=169.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCc--CCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL--GHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l--~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 221 (1419)
.++|+|+|+.+++|++++|+|||||||||||++|+|.+ ++ .+|+|.++|+++..... +..++|++|++.++
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~---~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEV---TSGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCC---CcceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 36999999999999999999999999999999999985 34 49999999998765432 23489999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcc-ccccccc
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTLVG 300 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg 300 (1419)
+.+|++|++.+.......... .... ...+....++.+++.+||++ ..++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~~------------------~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSARG------------------EEPL---------DLLDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhcccc------------------cccc---------cHHHHHHHHHHHHHHcCCchhhcccccc
Confidence 999999999875432110000 0000 00011234678899999973 4555443
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhh-cCeEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL-FDDVI 379 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~-~D~vi 379 (1419)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ .+++|+.++|+..++... +|+++
T Consensus 143 ----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~vsH~~~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 ----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE--PDRSFLIITHYQRLLNYIKPDYVH 216 (243)
T ss_pred ----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCcEEEEEEecHHHHHhhcCCeEE
Confidence 14999999999999999999999999999999999999999999999864 245677788999999888 89999
Q ss_pred EEcCCeEEEEcChhhHH
Q 000562 380 LLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 380 lL~~G~iv~~G~~~~~~ 396 (1419)
+|++|++++.|+.+++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999987553
No 368
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=319.92 Aligned_cols=206 Identities=24% Similarity=0.320 Sum_probs=165.6
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc---eEEEEEEECCccCCc-----ccccceEEEEccCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~ 913 (1419)
+.+|+|+|++|++||+++|+|+||||||||+++|+|..+.. +.+|+|.++|.+... ...++.++|++|++.+
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14240 16 FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNP 95 (250)
T ss_pred ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCcc
Confidence 46999999999999999999999999999999999964311 258999999987642 2345679999999887
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
++ .|++||+.+....+.. ...++.++.++++++.+++.+....... ..+..||||||||++|||+|+.+|++++||
T Consensus 96 ~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~G~~qrv~laral~~~p~llllD 171 (250)
T PRK14240 96 FP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLK-KSALGLSGGQQQRLCIARALAVEPEVLLMD 171 (250)
T ss_pred Cc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHh-cCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 77 8999999987543311 1223344567888888887421111111 124579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+|||+.++..+.+.|+++. +++|||+++|+++ .+.+.+|++++|++ |+++..|+.
T Consensus 172 EP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (250)
T PRK14240 172 EPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFLN-GEIVEFGDT 229 (250)
T ss_pred CCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999985 4899999999975 46778999999986 799988874
No 369
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-34 Score=354.63 Aligned_cols=207 Identities=27% Similarity=0.330 Sum_probs=173.7
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc----cccceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d~~~~~ 916 (1419)
++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|++.+++.
T Consensus 17 ~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 17 PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 4579999999999999999999999999999999999875 4589999999876431 123569999999988999
Q ss_pred ccHHHHHHHHhhhc----CCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 917 LTVLESLLFSAWLR----LPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 917 lTv~E~l~f~a~lr----~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+||+|++.++.... ........+.++.++++++.+++.+..+..+ ++|||||||||+||++|+.+|+||+|
T Consensus 95 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~lllL 169 (510)
T PRK09700 95 LTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----ANLSISHKQMLEIAKTLMLDAKVIIM 169 (510)
T ss_pred CcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999998753211 0000122334466889999999987777654 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
||||+|||+.++..+++.|++++++|+|||+++|+++ .+...+|++++|++ |++++.|+..+
T Consensus 170 DEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~i~~~g~~~~ 231 (510)
T PRK09700 170 DEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GSSVCSGMVSD 231 (510)
T ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEeeecchhh
Confidence 9999999999999999999999888999999999976 46678999999985 79999998754
No 370
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-33 Score=319.58 Aligned_cols=221 Identities=20% Similarity=0.271 Sum_probs=173.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC----CceEEEEccCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1419)
.++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++..... +..++|++|++.++++
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 36999999999999999999999999999999999998775 9999999998765332 2358999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
+||+||+.++........ ..... .+. + ..+ ....+....++.+++.+||++..++.++
T Consensus 95 ~tv~enl~~~~~~~~~~~---~~~~~------~~~-~--~~~-------~~~~~~~~~~~~~l~~~gl~~~~~~~~~--- 152 (255)
T PRK11300 95 MTVIENLLVAQHQQLKTG---LFSGL------LKT-P--AFR-------RAESEALDRAATWLERVGLLEHANRQAG--- 152 (255)
T ss_pred CcHHHHHHHhhhccccch---hhhhh------ccc-c--ccc-------cchhHHHHHHHHHHHhCChhhhhhCChh---
Confidence 999999998643110000 00000 000 0 000 0000112346778899999876666554
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++. .+++|+.++|+..++.+++|++++|++
T Consensus 153 --~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 153 --NLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNE-HNVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 69999999999999999999999999999999999999999999998653 246677788999999999999999999
Q ss_pred CeEEEEcChhhHH
Q 000562 384 GQIVYQGPRVSVL 396 (1419)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1419)
|++++.|+.+++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999987753
No 371
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=319.88 Aligned_cols=207 Identities=24% Similarity=0.265 Sum_probs=166.2
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc---eEEEEEEECCccCC----cccccceEEEEccCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR----QETFARISGYCEQNDIH 913 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~~~~----~~~~~~~~gyv~Q~d~~ 913 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+.. +.+|+|.++|.++. ....++.++|++|++.+
T Consensus 15 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~ 94 (249)
T PRK14253 15 ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNP 94 (249)
T ss_pred CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCc
Confidence 356999999999999999999999999999999999975521 35899999998753 12345679999999888
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
++ .||+||+.+...... ........+.+.+.++.+++.+....... .....||||||||++||++|+.+|++++||
T Consensus 95 ~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~llllD 170 (249)
T PRK14253 95 FP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLK-SHAFGLSGGQQQRLCIARTIAMEPDVILMD 170 (249)
T ss_pred Cc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhh-cCcccCCHHHHHHHHHHHHHHcCCCEEEEe
Confidence 87 899999987643321 11122334557778888887532111111 124579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 171 EP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 228 (249)
T PRK14253 171 EPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GELVEHDDT 228 (249)
T ss_pred CCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999875 699999999986 57778999999985 799998874
No 372
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-33 Score=323.62 Aligned_cols=205 Identities=24% Similarity=0.352 Sum_probs=171.7
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCC-CCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDW-QVAEM 224 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 224 (1419)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4999999999999999999999999999999999998876 9999999988754322 356899999963 34568
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||+||+.++....+... .+....++++++.+||.+..++.++
T Consensus 95 tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 136 (277)
T PRK13652 95 TVEQDIAFGPINLGLDE----------------------------------ETVAHRVSSALHMLGLEELRDRVPH---- 136 (277)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCCcc----
Confidence 99999987543211100 0012246788999999887776654
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+.+|+|++|++|
T Consensus 137 -~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 137 -HLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred -cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 69999999999999999999999999999999999999999999998763 2466777889999999999999999999
Q ss_pred eEEEEcChhhHH
Q 000562 385 QIVYQGPRVSVL 396 (1419)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1419)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999988874
No 373
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=321.21 Aligned_cols=203 Identities=23% Similarity=0.282 Sum_probs=167.4
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc-e--EEEEEEECCccCCc-----ccccceEEEEccCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-I--IEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~--~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~ 913 (1419)
..+|+|+|+++++||+++|+|+||||||||+++|+|..+.. + .+|+|.++|.+... ...++.++|++|++.+
T Consensus 20 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 99 (259)
T PRK14260 20 SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNP 99 (259)
T ss_pred eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEeccccc
Confidence 46999999999999999999999999999999999975421 2 47999999987532 2345679999999988
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCc
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~i 989 (1419)
++ .|++||+.+....+.. ....+..+.++++++.+++.+ ..+. .+..||||||||++|||+|+.+|++
T Consensus 100 ~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-----~~~~LS~G~~qrv~laral~~~p~l 171 (259)
T PRK14260 100 FP-MSIYENVAYGVRISAK--LPQADLDEIVESALKGAALWQEVKDKLNK-----SALGLSGGQQQRLCIARALAIKPKV 171 (259)
T ss_pred CC-ccHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHcCCcchhhhHhcC-----CcccCCHHHHHHHHHHHHHhcCCCE
Confidence 87 8999999886543321 122333456778889888842 2332 2457999999999999999999999
Q ss_pred ceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEec----CCEEEEeCCC
Q 000562 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR----GGELIYAGPL 1054 (1419)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~----gG~~~~~G~~ 1054 (1419)
++|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++ .|++++.|+.
T Consensus 172 llLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 172 LLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFSTDESRIGQMVEFGVT 238 (259)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEeccCCCCceEEEeCCH
Confidence 999999999999999999999999865 699999999986 57788999999973 4899999985
No 374
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=319.77 Aligned_cols=207 Identities=28% Similarity=0.363 Sum_probs=167.0
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc---eEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..... +.+|+|.++|.+... ...++.++|++|++.
T Consensus 15 ~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~ 94 (250)
T PRK14262 15 EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPT 94 (250)
T ss_pred CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCc
Confidence 356999999999999999999999999999999999975421 258999999987532 234567999999988
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+++ .|++|++.+....... ...+..++.+++.++.+++.+..+... ...+.+||||||||++||++|+.+|++++|
T Consensus 95 ~~~-~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~Gq~qr~~la~al~~~p~llll 170 (250)
T PRK14262 95 PFP-MSIYDNVAFGPRIHGV--KSKHKLDRIVEESLKKAALWDEVKSEL-NKPGTRLSGGQQQRLCIARALAVEPEVILL 170 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCchhHHHH-hCChhhcCHHHHHHHHHHHHHhCCCCEEEE
Confidence 877 8999999886543211 122233455788888888854211111 122458999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|++ |+++..|+.
T Consensus 171 DEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 229 (250)
T PRK14262 171 DEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GELIEYGPT 229 (250)
T ss_pred eCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999999865 799999999976 47788999999986 799988875
No 375
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-33 Score=321.59 Aligned_cols=204 Identities=27% Similarity=0.370 Sum_probs=169.9
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC-----CCceEEEEccCCC-CCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDW-QVA 222 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~~ 222 (1419)
++|+|+|++|++||+++|+||||||||||+++|+|.+++. +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 5999999999999999999999999999999999998775 999999999874211 1357999999962 344
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
..||+||+.++....+.. +. +....+..+++.+||++..++.++
T Consensus 93 ~~tv~e~i~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~L~~~~~~~~~-- 136 (275)
T PRK13639 93 APTVEEDVAFGPLNLGLS----------KE------------------------EVEKRVKEALKAVGMEGFENKPPH-- 136 (275)
T ss_pred cccHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHCCCchhhcCChh--
Confidence 579999998753211100 00 011236678999999887776654
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
.||||||||++|||+++.+|++++|||||+|||+.++.++.+.|+++++. +++|+.++|+..++.++||++++|+
T Consensus 137 ---~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~--~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 137 ---HLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKE--GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 59999999999999999999999999999999999999999999998753 5667778999999999999999999
Q ss_pred CCeEEEEcChhhHH
Q 000562 383 EGQIVYQGPRVSVL 396 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1419)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988764
No 376
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-33 Score=323.03 Aligned_cols=200 Identities=26% Similarity=0.315 Sum_probs=169.8
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCC-CCCCc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~-~~~~l 917 (1419)
..+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .++..
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGA 97 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEECCcCCHHHHhcceEEEEECHHHhhccC
Confidence 359999999999999999999999999999999999876 568999999987643 234567999999974 56778
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
||.||+.+..... ....++..+.++++++.++|.+..++. +..||||||||++|||+|+.+|++|+|||||+
T Consensus 98 tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~lAraL~~~p~llllDEPt~ 169 (277)
T PRK13642 98 TVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSGGQKQRVAVAGIIALRPEIIILDESTS 169 (277)
T ss_pred CHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998765432 122333445678999999998776664 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+.++..+.+.|++++++ |+|||+++|+++. + ..+|++++|++ |+++..|+.
T Consensus 170 ~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~~g~~ 224 (277)
T PRK13642 170 MLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIKEAAP 224 (277)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999875 9999999999763 4 46999999986 789988875
No 377
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.9e-33 Score=313.34 Aligned_cols=195 Identities=28% Similarity=0.418 Sum_probs=166.6
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEEEccCCCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~~~~ 915 (1419)
+.+|+|+|+++++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLLG 95 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhcC
Confidence 579999999999999999999999999999999999865 568999999987532 124567999999998888
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
.+|+.||+.+...... ....++..+.++++++.+++.+..+..+ +.||+|||||++||++|+.+|++++||||
T Consensus 96 ~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrv~laral~~~p~illlDEP 168 (220)
T TIGR02982 96 FLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLSGGQKQRVAIARALVHRPKLVLADEP 168 (220)
T ss_pred CCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 8999999998654321 1233444567889999999987766653 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCEE
Q 000562 996 TSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGEL 1048 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~ 1048 (1419)
|+|||+.++..+.+.|+++.+ .|+|||+++|+++ ..+.+|++++|.+ |++
T Consensus 169 ~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 169 TAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 999999999999999999876 4899999999975 4578999999985 554
No 378
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=9e-34 Score=314.52 Aligned_cols=200 Identities=28% Similarity=0.432 Sum_probs=161.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCC--CCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQV--AEMT 225 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 225 (1419)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++. ..++.++|++|++.+. +.+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999998775 999999998764 2346799999997653 3489
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+||+.++..... ..+.... ......++.+++.+||++..++.++
T Consensus 87 v~e~l~~~~~~~~--~~~~~~~----------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 131 (213)
T cd03235 87 VRDVVLMGLYGHK--GLFRRLS----------------------------KADKAKVDEALERVGLSELADRQIG----- 131 (213)
T ss_pred HHHHHHhcccccc--ccccCCC----------------------------HHHHHHHHHHHHHcCCHHHHhCCcc-----
Confidence 9999987532110 0000000 0012246778899999876666554
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+++++.++|+..++.+++|++++|++|
T Consensus 132 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 132 ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR--EGMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 5999999999999999999999999999999999999999999999875 2566777889999999999999999886
Q ss_pred EEEEc
Q 000562 386 IVYQG 390 (1419)
Q Consensus 386 iv~~G 390 (1419)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66544
No 379
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=9.4e-34 Score=367.44 Aligned_cols=208 Identities=25% Similarity=0.381 Sum_probs=167.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
.++|+|+|++|+|||.++|+||||||||||+++|+|.++|. +|+|.+||+++++... ++.++||+|++.+|. .
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-G 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-h
Confidence 35999999999999999999999999999999999999886 9999999999887654 578999999998665 6
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
|++|||.++.. ....+.+.+++ +.+. .+..+ -.|++..||.+|+. .
T Consensus 554 TI~eNi~~~~~----~~~~~~i~~a~------------------~~~~---------l~~~i--~~lp~gl~T~i~e~-G 599 (694)
T TIGR03375 554 TLRDNIALGAP----YADDEEILRAA------------------ELAG---------VTEFV--RRHPDGLDMQIGER-G 599 (694)
T ss_pred hHHHHHhCCCC----CCCHHHHHHHH------------------HHcC---------hHHHH--HhCcccccceecCC-C
Confidence 99999987521 00011111111 1100 11111 24677889999975 4
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
.+||||||||++||||++++|++++||||||+||+.++.+|.+.|++..+ ++|+ +.++|..+ ..+.+|+|++|++|
T Consensus 600 ~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~--~~T~-iiItHrl~-~~~~~D~iivl~~G 675 (694)
T TIGR03375 600 RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA--GKTL-VLVTHRTS-LLDLVDRIIVMDNG 675 (694)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CCEE-EEEecCHH-HHHhCCEEEEEeCC
Confidence 67999999999999999999999999999999999999999999998753 3454 44666654 45789999999999
Q ss_pred eEEEEcChhhHHH
Q 000562 385 QIVYQGPRVSVLD 397 (1419)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1419)
+++++|+++++++
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999999864
No 380
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=319.99 Aligned_cols=204 Identities=20% Similarity=0.290 Sum_probs=166.6
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCC--CeeeEEEECCccCCCCC-----CCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 221 (1419)
++|+|+|++|++||+++|+|||||||||||++|+|.+++.. +.+|+|.++|+++.... .++.++|++|++.++
T Consensus 26 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 105 (258)
T PRK14268 26 QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPF 105 (258)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccC
Confidence 59999999999999999999999999999999999986421 25999999998864321 245799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc----ccccc
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCADT 297 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 297 (1419)
+ +||+||+.|+.+..+.. . . +....++++++.+|+. +..++
T Consensus 106 ~-~tv~enl~~~~~~~~~~--~--------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 150 (258)
T PRK14268 106 P-MSIYDNVAYGPRIHGAN--K--------K------------------------DLDGVVENALRSAALWDETSDRLKS 150 (258)
T ss_pred c-ccHHHHHHHHHHHcCCC--H--------H------------------------HHHHHHHHHHHHcCCCcchhhhhcC
Confidence 7 89999998864322110 0 0 0012356678888874 23344
Q ss_pred cccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000562 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1419)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 377 (1419)
. .+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +++|+.++|+..++.+++|+
T Consensus 151 ~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~---~~tiiivsH~~~~~~~~~d~ 222 (258)
T PRK14268 151 P-----ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK---DYTIVIVTHNMQQAARISDY 222 (258)
T ss_pred C-----hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh---CCEEEEEECCHHHHHHhCCE
Confidence 3 456999999999999999999999999999999999999999999998853 36677788999999999999
Q ss_pred EEEEcCCeEEEEcChhhH
Q 000562 378 VILLSEGQIVYQGPRVSV 395 (1419)
Q Consensus 378 vilL~~G~iv~~G~~~~~ 395 (1419)
|++|++|++++.|+++++
T Consensus 223 i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 223 TGFFLMGELIEFGQTRQI 240 (258)
T ss_pred EEEEECCEEEEeCCHHHH
Confidence 999999999999998776
No 381
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=2.2e-33 Score=313.16 Aligned_cols=199 Identities=24% Similarity=0.333 Sum_probs=163.6
Q ss_pred ccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCC
Q 000562 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI 912 (1419)
Q Consensus 833 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~ 912 (1419)
.+.+..++.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...
T Consensus 26 ~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~ 94 (224)
T cd03220 26 LGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGG 94 (224)
T ss_pred hhhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hccccc
Confidence 344445667789999999999999999999999999999999999866 568999999976421 111233
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+.+.+||+||+.+....+. ....+.++.++++++.+++.+..++.+ ..||||||||++|||+|+.+|++++|
T Consensus 95 ~~~~~tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llll 166 (224)
T cd03220 95 FNPELTGRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLI 166 (224)
T ss_pred CCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4577999999988654331 122334456788999999987777654 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 167 DEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 167 DEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 9999999999999999999999877899999999976 46678999999985 7887765
No 382
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-33 Score=311.27 Aligned_cols=195 Identities=24% Similarity=0.349 Sum_probs=163.9
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCHHHHHH
Q 000562 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTVRETLD 231 (1419)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1419)
|+|+.+++||+++|+||||||||||+++|+|.++++ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999998775 9999999998755432 367999999999899999999998
Q ss_pred HhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCChHH
Q 000562 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1419)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1419)
++..... . .. . +.+..++++++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~-~--~~---~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGL-K--LT---A----------------------------EDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred ccccccc-C--cc---H----------------------------HHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 7532110 0 00 0 01224677899999987777655 4699999
Q ss_pred hHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEc
Q 000562 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQG 390 (1419)
Q Consensus 312 kkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G 390 (1419)
|||++||+|++.+|++++|||||+|||..++..+.+.|+++++.. +.+|+.++|+..++.+++|++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAET-KMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999999999999986532 456667899999999999999999999998764
No 383
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=320.19 Aligned_cols=207 Identities=22% Similarity=0.271 Sum_probs=169.2
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC--c-eEEEEEEECCccCCc-----ccccceEEEEccCC
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d 911 (1419)
++..+|+|+|++++|||+++|+|+||||||||+++|+|...+ + +.+|+|.++|.++.. ..+++.++|++|++
T Consensus 19 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 98 (261)
T PRK14263 19 GNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQP 98 (261)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCC
Confidence 456799999999999999999999999999999999997642 1 258999999987532 23456799999998
Q ss_pred CCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 000562 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1419)
Q Consensus 912 ~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ill 991 (1419)
.++ .+|++||+.+....+.. ..+..+.++++++.+++.+..+...+ ...+.||||||||++|||||+.+|++|+
T Consensus 99 ~~~-~~tv~enl~~~~~~~~~----~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~~LS~G~~qrv~laral~~~p~lll 172 (261)
T PRK14263 99 NPF-SMSIFDNVAFGLRLNRY----KGDLGDRVKHALQGAALWDEVKDKLK-VSGLSLSGGQQQRLCIARAIATEPEVLL 172 (261)
T ss_pred ccc-cccHHHHHHHHHhhcCc----hHHHHHHHHHHHHHcCCchhhhhhhh-CCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 876 59999999987644321 12234567889999998543222221 2346799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEe-------cCCEEEEeCCC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-------RGGELIYAGPL 1054 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-------~gG~~~~~G~~ 1054 (1419)
|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+ ++|+++..|+.
T Consensus 173 lDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 173 LDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 999999999999999999999985 4799999999986 4678899999996 35899999985
No 384
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-33 Score=320.21 Aligned_cols=205 Identities=20% Similarity=0.290 Sum_probs=169.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC---CCceEEEEccCCC-CCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1419)
..+|+|+|+++++||+++|+|+||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35999999999999999999999999999999999999775 999999998875432 2467999999974 5778
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCcc
Q 000562 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1419)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 303 (1419)
.||.||+.++....+.. .. +....++.+++.+||.+..++.+
T Consensus 97 ~tv~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~---- 138 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP----------RE------------------------EMIKRVDEALLAVNMLDFKTREP---- 138 (277)
T ss_pred CCHHHHHHhhHHHcCCC----------HH------------------------HHHHHHHHHHHHCCCHhHhhCCc----
Confidence 89999998754321110 00 01124677888999987666654
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000562 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1419)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 383 (1419)
..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++. .+|+|++|++
T Consensus 139 -~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tiil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 139 -ARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKY-QLTVLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHH-hCCEEEEEEC
Confidence 4699999999999999999999999999999999999999999999887532 456666888888886 6999999999
Q ss_pred CeEEEEcChhhHH
Q 000562 384 GQIVYQGPRVSVL 396 (1419)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1419)
|+++..|+.+++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 385
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=327.33 Aligned_cols=220 Identities=23% Similarity=0.305 Sum_probs=174.4
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC---ceEEEEEEECC
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 892 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 892 (1419)
.+.++|+++.... +...+|+|+|++|++||++||+|+||||||||+++|+|.... .+.+|+|.+||
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 3566666655421 224699999999999999999999999999999999997531 24589999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCc-HHHHHHHHHHHHHHcCCccccCCcccCCCC
Q 000562 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIE-LETQRAFVEEVMELVELTSLSGALIGLPGI 966 (1419)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~-~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~ 966 (1419)
.++.. ...++.++||+|++.+++ .|++||+.|+.... ... .+...+.++++++.++|.+-.+..++. ..
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~~ 223 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDK-AG 223 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhC-Cc
Confidence 98742 234678999999988775 79999999864322 112 222234567788888875433333333 34
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCC
Q 000562 967 NGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGG 1046 (1419)
Q Consensus 967 ~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG 1046 (1419)
..||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999875 799999999976 46677999999985 7
Q ss_pred EEEEeCCC
Q 000562 1047 ELIYAGPL 1054 (1419)
Q Consensus 1047 ~~~~~G~~ 1054 (1419)
+++..|++
T Consensus 301 ~i~e~g~~ 308 (329)
T PRK14257 301 WIEEAGET 308 (329)
T ss_pred EEEEeCCH
Confidence 99999986
No 386
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-33 Score=321.56 Aligned_cols=204 Identities=26% Similarity=0.342 Sum_probs=168.6
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC-----CCceEEEEccCCC-CCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDW-QVA 222 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~~ 222 (1419)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 15 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (271)
T PRK13638 15 PVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIF 91 (271)
T ss_pred ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccc
Confidence 5999999999999999999999999999999999999876 999999999874211 1357999999974 345
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCc
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 302 (1419)
..|+.||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 92 ~~~~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 135 (271)
T PRK13638 92 YTDIDSDIAFSLRNLGVPE----------------------------------AEITRRVDEALTLVDAQHFRHQPIQ-- 135 (271)
T ss_pred cccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhcCCch--
Confidence 6689999987543221100 0011235678889999877766554
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++.. +++|+.++|+..++.+++|++++|+
T Consensus 136 ---~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tii~vtH~~~~~~~~~d~i~~l~ 210 (271)
T PRK13638 136 ---CLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQ--GNHVIISSHDIDLIYEISDAVYVLR 210 (271)
T ss_pred ---hCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 69999999999999999999999999999999999999999999998652 4567778899999999999999999
Q ss_pred CCeEEEEcChhhHH
Q 000562 383 EGQIVYQGPRVSVL 396 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1419)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (271)
T PRK13638 211 QGQILTHGAPGEVF 224 (271)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999987764
No 387
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-33 Score=317.34 Aligned_cols=210 Identities=20% Similarity=0.237 Sum_probs=166.6
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcC--CCCCeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
++|+|+|+.|++|++++|+||||||||||+++|+|.++ |..+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 59999999999999999999999999999999999986 2223589999999887421 1246799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+ .||+||+.+......... . .+....++++++.+||........ +
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~-~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 151 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLS-R--------------------------------AEMDERVEWALTKAALWNEVKDKL-H 151 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCC-H--------------------------------HHHHHHHHHHHHHcCCChhhHHHH-h
Confidence 6 899999987643211000 0 001123567788888742111111 1
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
.....||||||||++|||||+.+|++++|||||+|||..++..+.+.|+++.. +++|+.++|+..++.+++|++++|
T Consensus 152 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~---~~tiii~sH~~~~~~~~~d~i~~l 228 (260)
T PRK10744 152 QSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ---DYTVVIVTHNMQQAARCSDYTAFM 228 (260)
T ss_pred cCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998852 356777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|+++..|+.+++.
T Consensus 229 ~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 229 YLGELIEFGNTDTIF 243 (260)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987764
No 388
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.7e-33 Score=322.12 Aligned_cols=216 Identities=22% Similarity=0.302 Sum_probs=173.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC--------CCceEEEEccCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--------PPRTSAYVSQQDW 219 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--------~~~~~~yv~Q~d~ 219 (1419)
.++|+|+|+.+++||+++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 35999999999999999999999999999999999998775334799999998764321 1356899999998
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccc
Q 000562 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1419)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1419)
+++.+||+||+.+...... . . ... ..+.. ..+.+..++.+++.+||++..|+.+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~--~-~------~~~--~~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGST--P-F------WRT--CFSWF---------------TREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhcccc--c-c------hhh--hcccc---------------cHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 8999999999987532100 0 0 000 00000 0011234678899999987777655
Q ss_pred cCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000562 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1419)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 379 (1419)
+ .|||||||||+|||||+.+|++++|||||+|||..++..+.+.|+++++.. +++|+.++|+..++.+++|+|+
T Consensus 151 ~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 151 S-----TLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred c-----ccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 4 599999999999999999999999999999999999999999999987532 5677778899999999999999
Q ss_pred EEcCCeEEEEcChhhH
Q 000562 380 LLSEGQIVYQGPRVSV 395 (1419)
Q Consensus 380 lL~~G~iv~~G~~~~~ 395 (1419)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999987664
No 389
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=316.68 Aligned_cols=200 Identities=25% Similarity=0.376 Sum_probs=167.0
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC---CCceEEEEccCCCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 225 (1419)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 5999999999999999999999999999999999998775 999999998875432 2467999999987775 69
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc-ccccccccCccC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLVGDEML 304 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 304 (1419)
|+||+.++....+ . ....++.+++.+||+ +..++. .
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATRD-----V 129 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhCC-----c
Confidence 9999976432110 0 011245678889996 344443 4
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
..|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKM-NLTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhC-CCEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 4699999999999999999999999999999999999999999999886532 456777889999999999999999999
Q ss_pred eEEEEcChhhHH
Q 000562 385 QIVYQGPRVSVL 396 (1419)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1419)
+++..|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999987763
No 390
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-33 Score=318.60 Aligned_cols=203 Identities=26% Similarity=0.311 Sum_probs=168.4
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCC------C---CCCceEEEEccCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKE------F---VPPRTSAYVSQQDW 219 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~------~---~~~~~~~yv~Q~d~ 219 (1419)
.+|+|+|+++++||+++|+|||||||||||++|+|.+++. +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 5999999999999999999999999999999999998775 9999999987631 0 11357999999999
Q ss_pred CCCCCCHHHHHHHhh-hhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccc
Q 000562 220 QVAEMTVRETLDFAG-QCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1419)
Q Consensus 220 ~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1419)
+++.+||+||+.+.. ...+.. . .+....++.+++.+||+...++.
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLS----------K------------------------DQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCC
Confidence 899999999997531 111100 0 00112367788999998766665
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
+ +.|||||||||+||||++.+|++++|||||+|||..++..+.+.|+++.. . +++++.++|+..++.+++|++
T Consensus 139 ~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 P-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-T-GITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEE
Confidence 5 46999999999999999999999999999999999999999999998864 2 466777889999999999999
Q ss_pred EEEcCCeEEEEcChhhH
Q 000562 379 ILLSEGQIVYQGPRVSV 395 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~ 395 (1419)
++|++|+++++|+.+++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999987654
No 391
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=319.77 Aligned_cols=208 Identities=23% Similarity=0.253 Sum_probs=168.3
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc---eEEEEEEECCccCCc-----ccccceEEEEccCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~ 913 (1419)
..+|+|+|+++++||++||+|+||||||||+++|+|..+.. ..+|+|.++|.++.. ...++.++|++|++.+
T Consensus 20 ~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~l 99 (261)
T PRK14258 20 QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVSMVHPKPNL 99 (261)
T ss_pred eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEEEEecCCcc
Confidence 46999999999999999999999999999999999976521 237999999987531 2345679999999888
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
++ .|++||+.+....... ....+..+.+.++++.+++.+..+...+ ..+..||||||||++||++|+.+|++++||
T Consensus 100 ~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LSgGq~qrv~laral~~~p~vllLD 175 (261)
T PRK14258 100 FP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIH-KSALDLSGGQQQRLCIARALAVKPKVLLMD 175 (261)
T ss_pred Cc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhc-CCcccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 87 8999999876433211 1222334567889999988542221111 124579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecC----CEEEEeCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRG----GELIYAGPL 1054 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~g----G~~~~~G~~ 1054 (1419)
|||+|||+.+...+.+.|+++++ .|+|||+++|++. ++.+.+|++++|++| |++++.|+.
T Consensus 176 EP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~~~~G~i~~~~~~ 240 (261)
T PRK14258 176 EPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNENRIGQLVEFGLT 240 (261)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCCCcCceEEEeCCH
Confidence 99999999999999999999875 4899999999986 577889999999853 899999986
No 392
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-34 Score=286.37 Aligned_cols=213 Identities=22% Similarity=0.315 Sum_probs=180.1
Q ss_pred cccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCC-------------c-
Q 000562 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR-------------Q- 897 (1419)
Q Consensus 832 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~-------------~- 897 (1419)
..+..+.++...+|++||+..+.|+++.|+|.|||||||+|+||.-..+ +..|.|.+||..+. .
T Consensus 9 v~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~ 86 (256)
T COG4598 9 VEDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKR 86 (256)
T ss_pred hhHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHH
Confidence 3445566788899999999999999999999999999999999987766 56899999997531 1
Q ss_pred --ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHH
Q 000562 898 --ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRK 975 (1419)
Q Consensus 898 --~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrq 975 (1419)
...+...|+|+|+..+..++||.||+.-+..-- ...++.+..++.+..+..+|+.+.+|... ..|||||+|
T Consensus 87 q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhV--Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----~~LSGGQQQ 159 (256)
T COG4598 87 QLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHV--LGVSKAEAIERAEKYLAKVGIAEKADAYP-----AHLSGGQQQ 159 (256)
T ss_pred HHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHh--hcCCHHHHHHHHHHHHHHhCchhhhhcCc-----cccCchHHH
Confidence 123345799999999999999999987542111 23455666778889999999999888653 479999999
Q ss_pred HHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 976 RLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 976 rl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|++|||||+.+|+++++|||||.|||+-.-++.+.+++++++|+|.+++||.+.. .-+...+++.|.+ |.+...||+.
T Consensus 160 R~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P~ 237 (256)
T COG4598 160 RVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPPE 237 (256)
T ss_pred HHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCChH
Confidence 9999999999999999999999999999999999999999999999999998764 5566789999986 7999999973
No 393
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=318.58 Aligned_cols=204 Identities=26% Similarity=0.318 Sum_probs=165.7
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCce---EEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGI---IEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~---~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
++.+|+|+|++|++||+++|+|+||||||||+++|+|..++.+ .+|+|.++|.+... ..+++.++|++|++.
T Consensus 16 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 95 (252)
T PRK14272 16 DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPN 95 (252)
T ss_pred CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCc
Confidence 3569999999999999999999999999999999999864322 37999999987532 234567999999999
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ 988 (1419)
+++.+|++||+.+...... ....++..+.+++.++.+++.. ..+.. ++.||||||||++||++|+.+|+
T Consensus 96 ~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~ 168 (252)
T PRK14272 96 PFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP-----ATGLSGGQQQRLCIARALAVEPE 168 (252)
T ss_pred cCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC-----cccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999987643221 1112233445666777776542 22322 45799999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|++ |++++.|+.
T Consensus 169 llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 231 (252)
T PRK14272 169 ILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFLV-GDLVEHGPT 231 (252)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999864 799999999986 46678999999985 799998875
No 394
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-33 Score=312.98 Aligned_cols=205 Identities=26% Similarity=0.341 Sum_probs=173.0
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC-CCceEEEEccCCCCCCCCCHH
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVR 227 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~ 227 (1419)
++|+|+|++++||++++|+||||||||||+++|+|.+++. +|+|+++|+++.+.. .++.++|++|++..++.+|++
T Consensus 14 ~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 14 VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcHH
Confidence 6999999999999999999999999999999999999875 899999999876533 246799999999888889999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000562 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1419)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1419)
||+.++....+.. . ......++.+++.+||++..++.+ ..|
T Consensus 91 ~nl~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~l 131 (232)
T cd03300 91 ENIAFGLRLKKLP--K--------------------------------AEIKERVAEALDLVQLEGYANRKP-----SQL 131 (232)
T ss_pred HHHHHHHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hhC
Confidence 9998764432110 0 001223577889999987777655 469
Q ss_pred ChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 000562 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1419)
Q Consensus 308 SGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv 387 (1419)
|||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++... +.+|+.++|+..++.+.+|++++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~-~~tiii~sh~~~~~~~~~d~i~~l~~G~~~ 210 (232)
T cd03300 132 SGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKEL-GITFVFVTHDQEEALTMSDRIAVMNKGKIQ 210 (232)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999987532 456666888889999999999999999999
Q ss_pred EEcChhhHH
Q 000562 388 YQGPRVSVL 396 (1419)
Q Consensus 388 ~~G~~~~~~ 396 (1419)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (232)
T cd03300 211 QIGTPEEIY 219 (232)
T ss_pred ecCCHHHHH
Confidence 999877653
No 395
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.6e-33 Score=319.98 Aligned_cols=202 Identities=26% Similarity=0.305 Sum_probs=165.2
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCcc-----CCcc---c----ccceEEEEcc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP-----KRQE---T----FARISGYCEQ 909 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~-----~~~~---~----~~~~~gyv~Q 909 (1419)
+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+ +... . .++.++|++|
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 19 RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 469999999999999999999999999999999999866 468999999986 4321 1 2346999999
Q ss_pred CCC--CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000562 910 NDI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1419)
Q Consensus 910 ~d~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~ 986 (1419)
++. +.+.+|+.|++.+...... . ....+..+.+.++++.+++.+ ..+.. +..||||||||++|||+|+.+
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~-~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~Gq~qrl~laral~~~ 169 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVG-A-RHYGDIRATAGDWLERVEIDAARIDDL-----PTTFSGGMQQRLQIARNLVTH 169 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhc-c-CcHHHHHHHHHHHHHHcCCChhHHhCC-----CccCCHHHHHHHHHHHHHhcC
Confidence 974 5677899999876432111 1 112233456788999999863 44443 357999999999999999999
Q ss_pred CCcceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 987 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+||+|||||+|||+.+...+.+.|++++++ |.|||+++|++. .+...+|++++|++ |++++.|+.
T Consensus 170 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 170 PRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRLLVMKQ-GRVVESGLT 236 (258)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999998765 899999999976 46568999999985 799999875
No 396
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-33 Score=319.69 Aligned_cols=207 Identities=23% Similarity=0.313 Sum_probs=168.2
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC---ceEEEEEEECCccCCc----ccccceEEEEccCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ----ETFARISGYCEQNDIH 913 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d~~ 913 (1419)
++.+|+|+|++|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|.++.. ...++.++|++|++.+
T Consensus 33 ~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l 112 (276)
T PRK14271 33 GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNP 112 (276)
T ss_pred CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCcc
Confidence 45799999999999999999999999999999999997642 1358999999987532 2345679999999888
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
++ .|++||+.+...... ....++..+.+.++++.+++.+..+.... ..+..||||||||++|||+|+.+|++++||
T Consensus 113 ~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~LSgGq~qrl~LAral~~~p~lllLD 188 (276)
T PRK14271 113 FP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFRLSGGQQQLLCLARTLAVNPEVLLLD 188 (276)
T ss_pred CC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 87 899999987643221 12233334456788899988653221111 124579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 189 EPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i~~~g~~ 246 (276)
T PRK14271 189 EPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRLVEEGPT 246 (276)
T ss_pred CCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999876 589999999976 56788999999985 799999885
No 397
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=318.29 Aligned_cols=212 Identities=22% Similarity=0.311 Sum_probs=168.9
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCC--C---CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKE--F---VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~d~~~ 221 (1419)
++|+|+|+++++||+++|+||||||||||+++|+|.+++. .+.+|+|+++|+++.. . ..++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 5999999999999999999999999999999999998762 1358999999998752 1 1245799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+.+||.||+.++....+.....+ +....++++++.+||........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKSKK--------------------------------ELDERVEWALKKAALWDEVKDRL-N 144 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCCHH--------------------------------HHHHHHHHHHHHcCCccchhhhh-c
Confidence 99999999987643221000000 01123566778888743111111 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
...+.|||||||||+|||||+.+|++++|||||+|||+.++.++.+.|+++++ + .+|+.++|+..++.+++|+|++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 221 (253)
T PRK14267 145 DYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFL 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999999854 3 56777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|++++.|+++++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 222 YLGKLIEVGPTRKVF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 398
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.3e-33 Score=367.06 Aligned_cols=207 Identities=28% Similarity=0.366 Sum_probs=165.5
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1419)
++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|++||+++++... ++.++||+|++.+|. .|
T Consensus 488 ~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-gT 563 (708)
T TIGR01193 488 NILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFS-GS 563 (708)
T ss_pred cceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceehh-HH
Confidence 5999999999999999999999999999999999999886 9999999999877654 578999999998665 59
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+|||.++.+. ....+.+.++++ .+. .++.+ -.|+...||.||+. ..
T Consensus 564 I~eNi~l~~~~---~~~~~~i~~a~~------------------~a~---------l~~~i--~~lp~gldt~i~e~-G~ 610 (708)
T TIGR01193 564 ILENLLLGAKE---NVSQDEIWAACE------------------IAE---------IKDDI--ENMPLGYQTELSEE-GS 610 (708)
T ss_pred HHHHHhccCCC---CCCHHHHHHHHH------------------HhC---------CHHHH--HhcccccCcEecCC-CC
Confidence 99999875311 000111111111 100 11111 24677889999974 46
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
+||||||||++||||++++|++|+||||||+||+.+...+.+.|++. .++| +|.++|..+ ..+.+|+|++|++|+
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T-~IiitHr~~-~~~~~D~i~~l~~G~ 685 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKT-IIFVAHRLS-VAKQSDKIIVLDHGK 685 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCE-EEEEecchH-HHHcCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999864 2444 455666655 557899999999999
Q ss_pred EEEEcChhhHHH
Q 000562 386 IVYQGPRVSVLD 397 (1419)
Q Consensus 386 iv~~G~~~~~~~ 397 (1419)
+++.|+++++.+
T Consensus 686 i~~~G~~~~L~~ 697 (708)
T TIGR01193 686 IIEQGSHDELLD 697 (708)
T ss_pred EEEECCHHHHHh
Confidence 999999998864
No 399
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.8e-33 Score=311.96 Aligned_cols=188 Identities=24% Similarity=0.310 Sum_probs=162.8
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHH
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 921 (1419)
+.+++++|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.....++.++|++|++.+++.+|++|
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i~~~~~~~~i~~~~q~~~~~~~~t~~e 101 (214)
T PRK13543 24 EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTATRGDRSRFMAYLGHLPGLKADLSTLE 101 (214)
T ss_pred ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEccchhhhhceEEeecCcccccCCcHHH
Confidence 469999999999999999999999999999999999876 458999999987654334557899999998888899999
Q ss_pred HHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCH
Q 000562 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1419)
Q Consensus 922 ~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~ 1001 (1419)
++.+....+. .. ..+.++++++.+++.+..+..+ ..||+|||||++||++++.+|++++|||||+|||+
T Consensus 102 ~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~ 170 (214)
T PRK13543 102 NLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKKRLALARLWLSPAPLWLLDEPYANLDL 170 (214)
T ss_pred HHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 9988654321 11 2234678899999987766654 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000562 1002 RAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1419)
Q Consensus 1002 ~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1043 (1419)
.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++.
T Consensus 171 ~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 171 EGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 9999999999999888999999999986 5778999999986
No 400
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-33 Score=317.01 Aligned_cols=210 Identities=24% Similarity=0.311 Sum_probs=166.5
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcC--CCCCeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +..+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 59999999999999999999999999999999999864 1113589999999887532 1245799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+ .||+||+.++....+.... + .....++.+++.+||.+...+.. +
T Consensus 100 ~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVKDK-A--------------------------------YLAERVERSLRHAALWDEVKDRL-H 144 (253)
T ss_pred c-CcHHHHHHHHHHHcCCCCH-H--------------------------------HHHHHHHHHHHHcCCchhhhHHh-h
Confidence 7 5999999886432211000 0 01123556777888854221222 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
...+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++.+++|+|++|
T Consensus 145 ~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~tH~~~~~~~~~d~v~~l 221 (253)
T PRK14242 145 ESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA--R-YTIIIVTHNMQQAARVSDVTAFF 221 (253)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CeEEEEEecHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999999843 3 56777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|+++..|+.+++.
T Consensus 222 ~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 222 YMGKLIEVGPTEQIF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999887763
No 401
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-33 Score=310.77 Aligned_cols=210 Identities=22% Similarity=0.338 Sum_probs=172.9
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCC---CceEEEEEEECCccCC---cc----cccceEEEEccC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT---GGIIEGDIYISGYPKR---QE----TFARISGYCEQN 910 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~---~~~~~G~i~i~g~~~~---~~----~~~~~~gyv~Q~ 910 (1419)
...+++||||++++||++||+|.|||||||+.++|.|..+ ....+|+|.++|.++. ++ -+.+.++|++|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999765 2356799999998642 22 133579999999
Q ss_pred C--CCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000562 911 D--IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1419)
Q Consensus 911 d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ 988 (1419)
+ .+.|.+||.+-+.-......... ..++..+++.++++.+++.+-...+- ..+.+|||||||||.||.||+.+|+
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~--~YPhelSGGMrQRV~IAmala~~P~ 173 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLK--SYPHELSGGMRQRVMIAMALALNPK 173 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHh--hCCcccCCcHHHHHHHHHHHhCCCC
Confidence 6 46788999887765544322111 34455677888999999976432221 2356899999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
+||.||||++||...+++|+++|+++.+ .|.|+|++|||+.. +.+.+|||+||.. |++|..||..
T Consensus 174 LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~v-va~~aDri~VMYa-G~iVE~g~~~ 239 (316)
T COG0444 174 LLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGV-VAEIADRVAVMYA-GRIVEEGPVE 239 (316)
T ss_pred EEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhcceEEEEEC-cEEEEeCCHH
Confidence 9999999999999999999999999986 69999999999874 8899999999995 8999999963
No 402
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.3e-33 Score=309.93 Aligned_cols=185 Identities=26% Similarity=0.323 Sum_probs=159.8
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCcc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (201)
T cd03231 12 GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTLS 89 (201)
T ss_pred CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccccHHhhhheEEeccccccCCCcC
Confidence 4569999999999999999999999999999999999876 458999999987532 235567999999998888999
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsg 998 (1419)
++|++.+.... . ..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++++|||||+|
T Consensus 90 v~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~ 155 (201)
T cd03231 90 VLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQRRVALARLLLSGRPLWILDEPTTA 155 (201)
T ss_pred HHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Confidence 99999875311 1 2345788999999987766653 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEE
Q 000562 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1419)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1042 (1419)
||+.+...+++.|+++.++|+|+|+++|++. +....+|+++++
T Consensus 156 LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 156 LDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 9999999999999998877999999999976 577788998876
No 403
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.4e-33 Score=310.45 Aligned_cols=188 Identities=23% Similarity=0.322 Sum_probs=157.9
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCcc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
++.+|+|+|+++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 13 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t 90 (204)
T PRK13538 13 ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIRRQRDEYHQDLLYLGHQPGIKTELT 90 (204)
T ss_pred CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcccchHHhhhheEEeCCccccCcCCc
Confidence 4569999999999999999999999999999999999866 468999999987542 234567899999998889999
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsg 998 (1419)
++|++.+....+.. ..++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++++|||||+|
T Consensus 91 v~e~l~~~~~~~~~------~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~~ 159 (204)
T PRK13538 91 ALENLRFYQRLHGP------GDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQRRVALARLWLTRAPLWILDEPFTA 159 (204)
T ss_pred HHHHHHHHHHhcCc------cHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcc
Confidence 99999886543211 12345788999999987766543 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEE
Q 000562 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1419)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1042 (1419)
||+.+...+.+.|++++++|+|||+++|+++ .+-..-+|++++
T Consensus 160 LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 160 IDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999877899999999976 343433555554
No 404
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=317.96 Aligned_cols=207 Identities=23% Similarity=0.283 Sum_probs=165.7
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc---eEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
++.+|+|+|++|++|++++|+||||||||||+++|+|..++. +.+|+|.++|.+... ..+++.++|++|++.
T Consensus 16 ~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 95 (251)
T PRK14249 16 KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPN 95 (251)
T ss_pred CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCc
Confidence 346999999999999999999999999999999999976521 236999999987532 234677999999998
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+++. |++||+.+....+... ..+..++.++++++.+++.+....... ..+..||||||||++|||+|+.+|++++|
T Consensus 96 ~~~~-tv~enl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~Gq~qrv~laral~~~p~lllL 171 (251)
T PRK14249 96 PFPK-SIFDNVAFGPRMLGTT--AQSRLDEVVEKSLRQAALWDEVKDNLH-KSGLALSGGQQQRLCIARVLAIEPEVILM 171 (251)
T ss_pred cCcC-cHHHHHhhHHHhcCCC--hhhHHHHHHHHHHHHhCCchhhhhHhh-CCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8875 9999999875433111 112233456777888887532111111 22457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 172 DEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 230 (251)
T PRK14249 172 DEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GDLVEYGRT 230 (251)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-CeEEEeCCH
Confidence 99999999999999999999985 5899999999986 46678899999985 799998875
No 405
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-33 Score=313.18 Aligned_cols=204 Identities=27% Similarity=0.407 Sum_probs=172.0
Q ss_pred eeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC-CCceEEEEccCCCCCCCCCHHH
Q 000562 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRE 228 (1419)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 228 (1419)
+|+|+|++|+|||+++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+|++|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999998775 899999999876533 2467999999998898999999
Q ss_pred HHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCC
Q 000562 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1419)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 308 (1419)
|+.++....+.. . . +....+.++++.+||.+..++.+. .||
T Consensus 91 ~l~~~~~~~~~~--~------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS 131 (235)
T cd03299 91 NIAYGLKKRKVD--K------------------K--------------EIERKVLEIAEMLGIDHLLNRKPE-----TLS 131 (235)
T ss_pred HHHHHHHHcCCC--H------------------H--------------HHHHHHHHHHHHcCChhHHhcCcc-----cCC
Confidence 998754321100 0 0 011235678889999877776654 599
Q ss_pred hHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 000562 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1419)
Q Consensus 309 GGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~ 388 (1419)
|||||||+||||++.+|++++|||||+|||+.++.++.+.|++++... +++++.++|+.+++.+.+|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEF-GVTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999986533 4566678889999999999999999999999
Q ss_pred EcChhhHH
Q 000562 389 QGPRVSVL 396 (1419)
Q Consensus 389 ~G~~~~~~ 396 (1419)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99887664
No 406
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-33 Score=320.84 Aligned_cols=208 Identities=27% Similarity=0.366 Sum_probs=171.3
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1419)
++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+|
T Consensus 25 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 101 (265)
T PRK10575 25 TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMT 101 (265)
T ss_pred EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCcc
Confidence 6999999999999999999999999999999999998765 9999999987754322 357999999988888999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|.||+.++..... . ... . .. ......++.+++.+||++..++.++
T Consensus 102 v~e~l~~~~~~~~-~-~~~-------------~-~~--------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 146 (265)
T PRK10575 102 VRELVAIGRYPWH-G-ALG-------------R-FG--------------AADREKVEEAISLVGLKPLAHRLVD----- 146 (265)
T ss_pred HHHHHHhCccccc-c-ccc-------------C-CC--------------HHHHHHHHHHHHHcCCHHHhcCCcc-----
Confidence 9999987532100 0 000 0 00 0012246778899999876676654
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++.. +++|+.++|+.+++.+.+|+|++|++|+
T Consensus 147 ~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~-~~tiii~sH~~~~i~~~~d~i~~l~~G~ 225 (265)
T PRK10575 147 SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQER-GLTVIAVLHDINMAARYCDYLVALRGGE 225 (265)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 599999999999999999999999999999999999999999999986532 4567778899999999999999999999
Q ss_pred EEEEcChhhH
Q 000562 386 IVYQGPRVSV 395 (1419)
Q Consensus 386 iv~~G~~~~~ 395 (1419)
+++.|+.+++
T Consensus 226 i~~~~~~~~~ 235 (265)
T PRK10575 226 MIAQGTPAEL 235 (265)
T ss_pred EEEecCHHHh
Confidence 9999988765
No 407
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=322.97 Aligned_cols=203 Identities=22% Similarity=0.316 Sum_probs=165.1
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCC--C-ceEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
+..+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 51 ~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 130 (286)
T PRK14275 51 EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDEVLLRKKIGMVFQKPN 130 (286)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccchHHhhhcEEEECCCCC
Confidence 3469999999999999999999999999999999999642 1 1258999999987532 134567999999988
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ 988 (1419)
+++. ||+||+.+....+.. ......++.+.++++.+++.+ ..+. .+..||||||||++|||+|+.+|+
T Consensus 131 l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-----~~~~LSgGq~qrv~LAraL~~~p~ 202 (286)
T PRK14275 131 PFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDK-----NALGLSGGQQQRLCVARTLAVEPE 202 (286)
T ss_pred CCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhC-----ChhhCCHHHHHHHHHHHHHhcCCC
Confidence 8775 999999986543311 112233456778888888742 2232 245799999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 203 lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~~-G~i~~~g~~ 265 (286)
T PRK14275 203 ILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFYE-GVLVEHAPT 265 (286)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999865 689999999986 46678999999985 799999885
No 408
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=3.4e-33 Score=318.08 Aligned_cols=201 Identities=22% Similarity=0.257 Sum_probs=165.0
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC--ceEEEEEEECCccCCcccc-cceEEEEccCCC--CCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GIIEGDIYISGYPKRQETF-ARISGYCEQNDI--HSPG 916 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~d~--~~~~ 916 (1419)
+.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|.++..... ++.++|++|++. +.+.
T Consensus 16 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~ 95 (254)
T PRK10418 16 QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPL 95 (254)
T ss_pred cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCcc
Confidence 3589999999999999999999999999999999998652 1168999999987643322 357999999974 4466
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccc---cCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL---SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~---~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
.|+.+++.+.+..... .. ..+.++++++.+++.+. .+.. +..||||||||++|||+|+.+|++|+||
T Consensus 96 ~~~~~~~~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~Gq~qrv~laral~~~p~lLlLD 165 (254)
T PRK10418 96 HTMHTHARETCLALGK---PA--DDATLTAALEAVGLENAARVLKLY-----PFEMSGGMLQRMMIALALLCEAPFIIAD 165 (254)
T ss_pred ccHHHHHHHHHHHcCC---Ch--HHHHHHHHHHHcCCCChhhhhhcC-----CcccCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 8999998765432211 11 22567889999999762 3333 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 166 EPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 225 (254)
T PRK10418 166 EPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH-GRIVEQGDV 225 (254)
T ss_pred CCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999999764 899999999976 46678999999985 799998885
No 409
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-33 Score=318.75 Aligned_cols=208 Identities=25% Similarity=0.365 Sum_probs=171.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC---CCceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1419)
.++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|+++.... .++.++|++|++..++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 36999999999999999999999999999999999998775 999999998765432 235699999998888889
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||.||+.++..-. ...+. ..+ ......++.+++.+||++..++.++
T Consensus 92 tv~~~i~~~~~~~--~~~~~-------------~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 137 (255)
T PRK11231 92 TVRELVAYGRSPW--LSLWG-------------RLS---------------AEDNARVNQAMEQTRINHLADRRLT---- 137 (255)
T ss_pred cHHHHHHhccchh--hhhcc-------------CCC---------------HHHHHHHHHHHHHcCCHHHHcCCcc----
Confidence 9999998753100 00000 000 0012245778889999877776654
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|++++.. +++++.++|+..++.+++|++++|++|
T Consensus 138 -~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~--~~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 138 -DLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQ--GKTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEECCHHHHHHhcCEEEEEECC
Confidence 59999999999999999999999999999999999999999999988652 456777889999999999999999999
Q ss_pred eEEEEcChhhH
Q 000562 385 QIVYQGPRVSV 395 (1419)
Q Consensus 385 ~iv~~G~~~~~ 395 (1419)
+++..|+.+++
T Consensus 215 ~i~~~~~~~~~ 225 (255)
T PRK11231 215 HVMAQGTPEEV 225 (255)
T ss_pred eEEEEcCHHHh
Confidence 99999988765
No 410
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-33 Score=312.87 Aligned_cols=201 Identities=22% Similarity=0.391 Sum_probs=169.2
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCHHHHHH
Q 000562 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTVRETLD 231 (1419)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1419)
|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|+++..... ++.++|++|++.+++.+|+.||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999998775 8999999998764332 357999999998899999999998
Q ss_pred HhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCChHH
Q 000562 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1419)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1419)
++... ... .. . .....++.+++.+||++..|+.+. .|||||
T Consensus 94 ~~~~~-~~~--~~---~----------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLK--LN---A----------------------------AQREKLHAIARQMGIEDLLARLPG-----QLSGGQ 134 (232)
T ss_pred ccccc-ccC--CC---H----------------------------HHHHHHHHHHHHcCcHHHHhCCcc-----cCCHHH
Confidence 75321 000 00 0 012236778999999877776664 599999
Q ss_pred hHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcC
Q 000562 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGP 391 (1419)
Q Consensus 312 kkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~ 391 (1419)
||||+||+|++.+|++++|||||+|||..++..+.+.|+++++.. +++++.++|+..++.+++|++++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQER-QLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999886533 4566678899999999999999999999999999
Q ss_pred hhhHH
Q 000562 392 RVSVL 396 (1419)
Q Consensus 392 ~~~~~ 396 (1419)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 87764
No 411
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-33 Score=318.66 Aligned_cols=206 Identities=25% Similarity=0.296 Sum_probs=166.6
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC---ceEEEEEEECCccCCc-----ccccceEEEEccCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~ 913 (1419)
+.+|+|+|++|++||+++|+|+||||||||+++|+|.... .+.+|+|.++|.+... ..+++.++|++|++.+
T Consensus 38 ~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l 117 (272)
T PRK14236 38 KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNP 117 (272)
T ss_pred eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCcc
Confidence 4699999999999999999999999999999999998542 1358999999987642 2345689999999888
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
++. |++||+.+....+. ....+..++.++++++.+++.+....... ..+..||||||||++|||+|+.+|++++||
T Consensus 118 ~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~Gq~qrv~laral~~~p~lllLD 193 (272)
T PRK14236 118 FPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLH-ENAFGLSGGQQQRLVIARAIAIEPEVLLLD 193 (272)
T ss_pred Ccc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhh-CCcccCCHHHHHHHHHHHHHHCCCCEEEEe
Confidence 876 99999987654321 11122234567888888888532111111 124579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+|||+.++..+.+.|+++++ +.|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 194 EPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 251 (272)
T PRK14236 194 EPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM-GKLVEYGDT 251 (272)
T ss_pred CCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999975 799999999976 46778999999985 799998875
No 412
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=319.84 Aligned_cols=210 Identities=24% Similarity=0.357 Sum_probs=172.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
.++|+|+|+++++|++++|+|||||||||||++|+|.++++ +|+|.++|+++..... ++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 36999999999999999999999999999999999998775 8999999998754332 35699999999888889
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||+||+.++..-.. . .... . . ......++.+++.+||++..++.+
T Consensus 97 tv~~~~~~~~~~~~-~-~~~~--------------~-~-------------~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (265)
T PRK10253 97 TVQELVARGRYPHQ-P-LFTR--------------W-R-------------KEDEEAVTKAMQATGITHLADQSV----- 141 (265)
T ss_pred cHHHHHHhCccccc-c-cccC--------------C-C-------------HHHHHHHHHHHHHcCCHHHhcCCc-----
Confidence 99999987521000 0 0000 0 0 001224677889999987666554
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
+.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|++++|++|
T Consensus 142 ~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~-~~tiii~tH~~~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 142 DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREK-GYTLAAVLHDLNQACRYASHLIALREG 220 (265)
T ss_pred ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999987532 456777889999999999999999999
Q ss_pred eEEEEcChhhHH
Q 000562 385 QIVYQGPRVSVL 396 (1419)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1419)
++++.|+.+++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999987764
No 413
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-34 Score=304.49 Aligned_cols=195 Identities=27% Similarity=0.415 Sum_probs=170.8
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC-------CCceEEEEccCCCCCCCCC
Q 000562 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 225 (1419)
++++..+.-.+|||-|+||||||||+|+|+|+..|+ +|.|.+||..+.+.. .+|.+|||+||..+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 577777775899999999999999999999999987 999999998664321 2589999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
|+-||.|+.... .....|++.+.||++|..+.. ..
T Consensus 93 VrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~-----P~ 127 (352)
T COG4148 93 VRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRY-----PG 127 (352)
T ss_pred Eecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhC-----CC
Confidence 999999975321 011257788999999988754 45
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
.|||||||||+|||||++.|++|+||||.+.||-....+|+-+|.++.++. +.-|+.++|...|+..++|+|++|++|+
T Consensus 128 ~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~-~IPIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 128 TLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEI-NIPILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred ccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhc-CCCEEEEecCHHHHHhhhheEEEecCCe
Confidence 799999999999999999999999999999999999999999999998865 5667789999999999999999999999
Q ss_pred EEEEcChhhHH
Q 000562 386 IVYQGPRVSVL 396 (1419)
Q Consensus 386 iv~~G~~~~~~ 396 (1419)
+...|+.+++.
T Consensus 207 V~A~g~~e~v~ 217 (352)
T COG4148 207 VKASGPLEEVW 217 (352)
T ss_pred EEecCcHHHHh
Confidence 99999998875
No 414
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=321.18 Aligned_cols=202 Identities=22% Similarity=0.285 Sum_probs=164.3
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCC--C-ceEEEEEEECCccCCc-----ccccceEEEEccCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~ 913 (1419)
+.+|+|+|+++++||+++|+|+||||||||+++|+|... . .+.+|+|.++|.+... ..+++.++|++|++.+
T Consensus 34 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 113 (268)
T PRK14248 34 KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREIGMVFQKPNP 113 (268)
T ss_pred ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccEEEEecCCcc
Confidence 469999999999999999999999999999999999632 1 1358999999987532 1345679999999888
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCc
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~i 989 (1419)
++. |++||+.+...... .......++.++++++.+++.+ ..+. .+..||||||||++|||+|+.+|++
T Consensus 114 ~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LSgGq~qrl~laral~~~p~l 185 (268)
T PRK14248 114 FPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHS-----SALSLSGGQQQRLCIARTLAMKPAV 185 (268)
T ss_pred Ccc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhc-----CcccCCHHHHHHHHHHHHHhCCCCE
Confidence 875 99999987643221 1112223455677888888752 2222 2457999999999999999999999
Q ss_pred ceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 186 llLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 247 (268)
T PRK14248 186 LLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFLN-GDLVEYDQT 247 (268)
T ss_pred EEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999865 689999999976 47788999999985 799999874
No 415
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=9e-32 Score=345.86 Aligned_cols=123 Identities=24% Similarity=0.359 Sum_probs=99.4
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccc-cCCcccCCCCCCCCHHHHHHHHHHHHHhh---CCCcce
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVA---NPSIVF 991 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~~g~~~~~~lSgGqrqrl~iA~~L~~---~p~ill 991 (1419)
.+||.|.+.|...+. .. ....++++.+||... .+.. ...|||||+||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~i------~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---SI------SRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---ch------hHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 467777777754332 01 123577888888653 3333 35799999999999999997 599999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEe-----cCCEEEEeCCC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPL 1054 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~gG~~~~~G~~ 1054 (1419)
|||||+|||+.+...+++.|+++.++|.|||+++|++. ....+|++++|. +||++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 446799999994 57999999985
No 416
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-33 Score=315.53 Aligned_cols=211 Identities=20% Similarity=0.267 Sum_probs=168.9
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcC--CCCCeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
.+|+|+|+.|++||+++|+|||||||||||++|+|.++ |..+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (252)
T PRK14256 18 HAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNPF 97 (252)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCCC
Confidence 59999999999999999999999999999999999975 3223589999999887432 1246799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+.+||+||+.++.+..+.... . +....++.+++.+||........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~-------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14256 98 PAMSIYDNVIAGYKLNGRVNR-------------------S--------------EADEIVESSLKRVALWDEVKDRL-K 143 (252)
T ss_pred CcCcHHHHHHhHHHhcCCCCH-------------------H--------------HHHHHHHHHHHHcCCchhhhHHh-h
Confidence 999999999875432110000 0 01123567788888854211111 1
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
..++.||||||||++|||+|+.+|++++|||||+|||..++.++.+.|+++++ + ++|+.++|+..++.+++|++++|
T Consensus 144 ~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~l 220 (252)
T PRK14256 144 SNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAFF 220 (252)
T ss_pred CCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEEE
Confidence 23457999999999999999999999999999999999999999999999864 3 56777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|+++..|+.+++.
T Consensus 221 ~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 221 YMGDLVECGETKKIF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 417
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.2e-33 Score=350.49 Aligned_cols=200 Identities=23% Similarity=0.329 Sum_probs=171.7
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc---c-ccceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~d~~~~~ 916 (1419)
++.+|+|+|+++++||++||+|||||||||||++|+|... +.+|+|.++|.++... . .++.+||++|++.+++.
T Consensus 23 ~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 23 GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 3569999999999999999999999999999999999866 4589999999875421 1 23468999999999999
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
+||+|++.+.... ..+.++.++++++.+++.+..+..+ ..|||||||||+||++|+.+|++|+|||||
T Consensus 101 ~tv~e~l~~~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~aL~~~p~lllLDEPt 168 (510)
T PRK15439 101 LSVKENILFGLPK-------RQASMQKMKQLLAALGCQLDLDSSA-----GSLEVADRQIVEILRGLMRDSRILILDEPT 168 (510)
T ss_pred CcHHHHhhccccc-------chHHHHHHHHHHHHcCCCccccCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 9999999875311 1223456789999999987776654 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
+|||+.++..+.+.|++++++|+|||+++|++. .+.+.+|++++|.+ |++++.|+..+
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~~ 226 (510)
T PRK15439 169 ASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALSGKTAD 226 (510)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecChHH
Confidence 999999999999999999888999999999976 46678999999985 79999998643
No 418
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-33 Score=314.55 Aligned_cols=212 Identities=19% Similarity=0.272 Sum_probs=169.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC---CCceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|.+++..+.+|+|+++|+++.+.. .++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 36999999999999999999999999999999999987542345999999999876532 2457999999988776 6
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||+||+.++....+.... . ......++.+++.+||........ ++..
T Consensus 94 tv~eni~~~~~~~~~~~~-------------------~-------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~ 140 (246)
T PRK14269 94 SIYENISYAPKLHGMIKN-------------------K-------------DEEEALVVDCLQKVGLFEEVKDKL-KQNA 140 (246)
T ss_pred cHHHHhhhHHhhcCcccC-------------------h-------------HHHHHHHHHHHHHcCCChhhhHHh-cCCc
Confidence 999999886433211000 0 001223567888889853211111 2345
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +++++.++|+.+++.+.+|++++|++|
T Consensus 141 ~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~i~~l~~G 217 (246)
T PRK14269 141 LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH---NLSMIMVTHNMQQGKRVADYTAFFHLG 217 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC---CCEEEEEecCHHHHHhhCcEEEEEECC
Confidence 67999999999999999999999999999999999999999999998753 456777889999999999999999999
Q ss_pred eEEEEcChhhHH
Q 000562 385 QIVYQGPRVSVL 396 (1419)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1419)
++++.|+.+++.
T Consensus 218 ~i~~~g~~~~~~ 229 (246)
T PRK14269 218 ELIEFGESKEFF 229 (246)
T ss_pred EEEEECCHHHHH
Confidence 999999987763
No 419
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3e-33 Score=349.46 Aligned_cols=210 Identities=22% Similarity=0.370 Sum_probs=173.5
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc----cccceEEEEccCCCCCC
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 915 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d~~~~ 915 (1419)
+++.+|+|||+++++||++||+||||||||||+++|+|..++++.+|+|.++|.++... ..++.+||++|++.+++
T Consensus 12 ~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (500)
T TIGR02633 12 GGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVP 91 (500)
T ss_pred CCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCC
Confidence 34579999999999999999999999999999999999865322589999999876431 12356999999998889
Q ss_pred CccHHHHHHHHhhhcCCC-CCcHHHHHHHHHHHHHHcCCcccc-CCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 916 GLTVLESLLFSAWLRLPS-EIELETQRAFVEEVMELVELTSLS-GALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~vl~~l~l~~~~-~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
.+||+|++.+....+... ....++..++++++++.+++.+.. +.. +..|||||||||+||++|+.+|++|+||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~iA~al~~~p~lllLD 166 (500)
T TIGR02633 92 ELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYGGGQQQLVEIAKALNKQARLLILD 166 (500)
T ss_pred CCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCCHHHHHHHHHHHHHhhCCCEEEEe
Confidence 999999998864332111 112233445688999999997654 333 3479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
|||+|||+.+...+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+...
T Consensus 167 EPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 227 (500)
T TIGR02633 167 EPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVATKDMST 227 (500)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEeeecCccc
Confidence 999999999999999999999888999999999976 46678999999986 78999988654
No 420
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.3e-32 Score=313.41 Aligned_cols=206 Identities=20% Similarity=0.246 Sum_probs=167.3
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCC-CeeeEEEECCccCCCCCC-CceEEEEccCCC--CCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL-QVSGKITYNGHGFKEFVP-PRTSAYVSQQDW--QVAEM 224 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~-~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~l 224 (1419)
++|+|+|+++++||+++|+||||||||||+++|+|.+++.. +.+|+|.++|+++..... ++.++||+|++. +.+..
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 58999999999999999999999999999999999987621 148999999998754322 357999999974 34567
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcc---cccccccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT---CADTLVGD 301 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~vg~ 301 (1419)
|+.+++.+.+...+.. .....++.+++.+||.+ ..++.
T Consensus 97 ~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (254)
T PRK10418 97 TMHTHARETCLALGKP------------------------------------ADDATLTAALEAVGLENAARVLKLY--- 137 (254)
T ss_pred cHHHHHHHHHHHcCCC------------------------------------hHHHHHHHHHHHcCCCChhhhhhcC---
Confidence 9999886543221100 00123567888999975 23443
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
.+.|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++++. .+++|+.++|+..++.+.+|++++|
T Consensus 138 --~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~~l 214 (254)
T PRK10418 138 --PFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVAVM 214 (254)
T ss_pred --CcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEEEE
Confidence 4569999999999999999999999999999999999999999999998753 3566777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 215 SHGRIVEQGDVETLF 229 (254)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999988763
No 421
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=5.7e-33 Score=307.91 Aligned_cols=199 Identities=21% Similarity=0.316 Sum_probs=166.3
Q ss_pred eeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC-CCceEEEEccCCCCCCCCCHHH
Q 000562 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRE 228 (1419)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 228 (1419)
+++|+|+++++|++++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 467999999999999999999999999999999998876 999999999875432 3467999999999898999999
Q ss_pred HHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCC
Q 000562 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1419)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 308 (1419)
|+.+...... .. + ......++++++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~~-~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KL--N-------------------------------AEQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhccC-Cc--c-------------------------------HHHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 9986432100 00 0 001123567889999987766655 4699
Q ss_pred hHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 000562 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1419)
Q Consensus 309 GGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~ 388 (1419)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.+. .+++|+.++|+..++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSE-RQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 99999999999999999999999999999999999999999998653 35667778899999999999999999999998
Q ss_pred EcC
Q 000562 389 QGP 391 (1419)
Q Consensus 389 ~G~ 391 (1419)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 874
No 422
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4.8e-33 Score=318.91 Aligned_cols=207 Identities=22% Similarity=0.261 Sum_probs=169.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCC--CCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDW--QVA 222 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 222 (1419)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999875 9999999988753221 246999999974 567
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc-ccccccccC
Q 000562 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLVGD 301 (1419)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 301 (1419)
.+||.|++.+..+...... . .+....++.+++.+||. ...++.+
T Consensus 103 ~~tv~~~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 147 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLE---------P------------------------EQREKQIIETLRQVGLLPDHASYYP-- 147 (267)
T ss_pred chhHHHHHHHHHHhccCCC---------H------------------------HHHHHHHHHHHHHcCCChHHHhcCc--
Confidence 8899999987543221000 0 00122467789999994 5555544
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|++++|
T Consensus 148 ---~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 148 ---HMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQ-GISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred ---hhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHhcCEEEEE
Confidence 4699999999999999999999999999999999999999999999987532 466777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999887764
No 423
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=349.12 Aligned_cols=208 Identities=25% Similarity=0.332 Sum_probs=174.4
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc----ccccceEEEEccCCCCCC
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSP 915 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d~~~~ 915 (1419)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++
T Consensus 9 ~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 86 (491)
T PRK10982 9 PGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVL 86 (491)
T ss_pred CCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEeccccccc
Confidence 34579999999999999999999999999999999999865 458999999987542 123467999999988889
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
.+||+|++.+............++..+.++++++.+++.+..+..+ ..|||||||||+||++|+.+|++|+||||
T Consensus 87 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEP 161 (491)
T PRK10982 87 QRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEP 161 (491)
T ss_pred CCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 9999999987532111111122334456889999999987766654 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
|+|||+.+...+.+.|++++++|+|||+++|+++ ++...+|++++|++ |+++..|+...
T Consensus 162 t~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 162 TSSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 9999999999999999999888999999999976 56678999999985 79999998654
No 424
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-33 Score=317.23 Aligned_cols=207 Identities=26% Similarity=0.287 Sum_probs=166.1
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc---eEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..... +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 18 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 97 (253)
T PRK14261 18 EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPN 97 (253)
T ss_pred CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCc
Confidence 356999999999999999999999999999999999974311 247999999987542 234567999999998
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+++. ||+||+.|....+.. ....+.++.+.++++.+++.+....... .....||+|||||++|||+|+.+|++++|
T Consensus 98 ~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~G~~qrv~laral~~~p~lllL 173 (253)
T PRK14261 98 PFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLH-DSALSLSGGQQQRLCIARTLAVNPEVILM 173 (253)
T ss_pred cCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhh-cChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8875 999999987544321 1222334567788888887531111111 12457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 174 DEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 232 (253)
T PRK14261 174 DEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GKLIEFDKT 232 (253)
T ss_pred eCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CEEEEcCCH
Confidence 999999999999999999999875 689999999976 46678999999985 799998885
No 425
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=4.1e-33 Score=315.92 Aligned_cols=197 Identities=25% Similarity=0.387 Sum_probs=167.5
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCccHH
Q 000562 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVL 920 (1419)
Q Consensus 844 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~ 920 (1419)
+|+|+|+++++||+++|+|+||||||||+++|+|..+ .+|+|.++|.++.. ..+++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7899999999999999999999999999999999864 27999999987542 23345689999998888889999
Q ss_pred HHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhh-------CCCcceee
Q 000562 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA-------NPSIVFMD 993 (1419)
Q Consensus 921 E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~-------~p~illLD 993 (1419)
||+.+..... ....+..+.++++++.+++.+..+..+ +.||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPDK----TRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCccC----CCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 9998753211 122233456789999999987666543 4799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999877999999999976 47788999999985 799999875
No 426
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=4.9e-33 Score=317.31 Aligned_cols=208 Identities=28% Similarity=0.405 Sum_probs=171.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
..+|+|+|+.+++||+++|+|||||||||||++|+|.+++. +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 36999999999999999999999999999999999998775 8999999998765432 34689999998778889
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
||+||+.++.... ...+ .. + ..+....++.+++.+||.+..++.++
T Consensus 91 tv~e~l~~~~~~~--~~~~-------------~~-~--------------~~~~~~~~~~~l~~~~l~~~~~~~~~---- 136 (256)
T TIGR03873 91 TVRDVVALGRIPH--RSLW-------------AG-D--------------SPHDAAVVDRALARTELSHLADRDMS---- 136 (256)
T ss_pred CHHHHHHhcchhh--hhhc-------------cC-C--------------CHHHHHHHHHHHHHcCcHhhhcCCcc----
Confidence 9999998742100 0000 00 0 00012246778889999876666554
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++... +++|+.++|+..++.+++|+|++|++|
T Consensus 137 -~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 137 -TLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAAT--GVTVVAALHDLNLAASYCDHVVVLDGG 213 (256)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 59999999999999999999999999999999999999999999998642 466777889999999999999999999
Q ss_pred eEEEEcChhhH
Q 000562 385 QIVYQGPRVSV 395 (1419)
Q Consensus 385 ~iv~~G~~~~~ 395 (1419)
+++..|+.+++
T Consensus 214 ~i~~~g~~~~~ 224 (256)
T TIGR03873 214 RVVAAGPPREV 224 (256)
T ss_pred CEEEecCHHHh
Confidence 99999988765
No 427
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=2.5e-33 Score=305.13 Aligned_cols=179 Identities=25% Similarity=0.316 Sum_probs=150.5
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-----ccccceEEEEccCCC-CC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HS 914 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~-~~ 914 (1419)
++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. ..
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 3569999999999999999999999999999999999876 468999999987531 134567999999973 33
Q ss_pred CCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeC
Q 000562 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1419)
Q Consensus 915 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDE 994 (1419)
...||+||+.+....+ ....++..+.++++++.+++.+..+..+ ..||||||||++|||+|+.+|++++|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3579999999865432 1223334456789999999987776654 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCC
Q 000562 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPS 1029 (1419)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~ 1029 (1419)
||+|||+.++..+.+.|++++++|+|||+++|++.
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999999877999999999975
No 428
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=7.2e-33 Score=312.10 Aligned_cols=205 Identities=27% Similarity=0.388 Sum_probs=171.9
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-CceEEEEccCCCCCCCCCHH
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTVR 227 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 227 (1419)
++|+|+|+++++||+++|+||||||||||+++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+|++
T Consensus 14 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 14 QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 6999999999999999999999999999999999998765 9999999998764333 46799999999888889999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCC
Q 000562 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1419)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 307 (1419)
||+.+.....+... . .....++++++.++|....|+.+ +.|
T Consensus 91 enl~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~l 131 (237)
T TIGR00968 91 DNIAFGLEIRKHPK----------A------------------------KIKARVEELLELVQLEGLGDRYP-----NQL 131 (237)
T ss_pred HHHHhHHHhcCCCH----------H------------------------HHHHHHHHHHHHcCCHhHhhCCh-----hhC
Confidence 99987643221100 0 00123567888999977666655 469
Q ss_pred ChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 000562 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1419)
Q Consensus 308 SGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv 387 (1419)
|||||||++||++++.+|++++|||||+|||..++..+.+.|++.+.. .+.+++.++|...++.+++|++++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~-~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~ 210 (237)
T TIGR00968 132 SGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDE-VHVTTVFVTHDQEEAMEVADRIVVMSNGKIE 210 (237)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999988653 2456666888889999999999999999999
Q ss_pred EEcChhhHH
Q 000562 388 YQGPRVSVL 396 (1419)
Q Consensus 388 ~~G~~~~~~ 396 (1419)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (237)
T TIGR00968 211 QIGSPDEVY 219 (237)
T ss_pred EecCHHHHH
Confidence 999987764
No 429
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.3e-33 Score=311.31 Aligned_cols=195 Identities=24% Similarity=0.360 Sum_probs=162.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC--C---CCceEEEEccCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--V---PPRTSAYVSQQDWQVA 222 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~--~---~~~~~~yv~Q~d~~~~ 222 (1419)
.++|+|+|+.+++|++++|+|||||||||||++|+|.+++. +|+|.++|+++... . .++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 35999999999999999999999999999999999998775 99999999887421 1 2467999999998888
Q ss_pred CCCHHHHHHHhhh-hcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 223 EMTVRETLDFAGQ-CQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 223 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
.+|++||+.++.. .++. . . .+....++.+++.+||++..++.+
T Consensus 90 ~~t~~e~l~~~~~~~~~~----~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 133 (213)
T cd03262 90 HLTVLENITLAPIKVKGM----S------K------------------------AEAEERALELLEKVGLADKADAYP-- 133 (213)
T ss_pred CCcHHHHHHhHHHHhcCC----C------H------------------------HHHHHHHHHHHHHcCCHhHhhhCc--
Confidence 9999999987532 1100 0 0 001223567888999987666655
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.+++|++++|
T Consensus 134 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~--~~tvi~~sh~~~~~~~~~d~i~~l 208 (213)
T cd03262 134 ---AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMVVVTHEMGFAREVADRVIFM 208 (213)
T ss_pred ---cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998752 456777889999999999999999
Q ss_pred cCCeE
Q 000562 382 SEGQI 386 (1419)
Q Consensus 382 ~~G~i 386 (1419)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 430
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=4.4e-33 Score=319.17 Aligned_cols=204 Identities=25% Similarity=0.343 Sum_probs=169.4
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc------ccccceEEEEccCC--CC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IH 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d--~~ 913 (1419)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.. ...++.++|++|++ .+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 102 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISAV 102 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccccChhHHHHHHhcEEEEEcChhhcc
Confidence 579999999999999999999999999999999999865 468999999987542 12456799999997 35
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
.+..|+.|++.+..... ......+..+.++++++.+++. +..+.. +..||+|||||++||++|+.+|++|+|
T Consensus 103 ~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LS~Ge~qrl~laral~~~p~lllL 175 (268)
T PRK10419 103 NPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PPQLSGGQLQRVCLARALAVEPKLLIL 175 (268)
T ss_pred CCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----CccCChHHHHHHHHHHHHhcCCCEEEE
Confidence 67889999987643211 1122334455688999999996 455543 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1056 (1419)
||||+|||+.+...+.+.|++++++ |.|||+++|++. ++.+.+|++++|.+ |++++.|+..+
T Consensus 176 DEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G~i~~~g~~~~ 238 (268)
T PRK10419 176 DEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-GQIVETQPVGD 238 (268)
T ss_pred eCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-CEEeeeCChhh
Confidence 9999999999999999999999765 899999999976 46678999999985 79999998643
No 431
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-33 Score=316.30 Aligned_cols=203 Identities=25% Similarity=0.340 Sum_probs=165.0
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC--c-eEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
.+.+|+|+|++|++||+++|+|+||||||||+++|+|..+. . +.+|+|.++|.+... ...++.++|++|++.
T Consensus 16 ~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~ 95 (251)
T PRK14251 16 NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPT 95 (251)
T ss_pred CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCc
Confidence 35699999999999999999999999999999999997641 1 358999999987532 234567999999988
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ 988 (1419)
+++ .||+||+.+....+.. ...+..++.++++++.+++.. ..+. .+..||||||||++|||+|+.+|+
T Consensus 96 ~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LS~Gq~qr~~laral~~~p~ 167 (251)
T PRK14251 96 PFP-FSVYDNVAYGLKIAGV--KDKELIDQRVEESLKQAAIWKETKDNLDR-----NAQAFSGGQQQRICIARALAVRPK 167 (251)
T ss_pred cCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCcchHHHhcc-----ChhhCCHHHHHHHHHHHHHhcCCC
Confidence 775 7999999876433211 112223355778889888842 2222 245799999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+++|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 168 llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 230 (251)
T PRK14251 168 VVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLMN-GDLIEAGPT 230 (251)
T ss_pred EEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999854 799999999986 46778999999985 799988874
No 432
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-33 Score=314.39 Aligned_cols=210 Identities=22% Similarity=0.321 Sum_probs=166.1
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcC--CCCCeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
++|+|+|+++++||+++|+|||||||||||++|+|..+ |..+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 59999999999999999999999999999999999853 4223489999999887431 1246799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+ +||+||+.++....+... + + .....++.+++.+|+.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~--~---~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKD--K---Q----------------------------VLDEAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCc--H---H----------------------------HHHHHHHHHHHHcCCchhHHHHH-h
Confidence 6 899999987643221100 0 0 00123456677777743211111 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
...+.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++.+ + ++|+.++|+.+++.+.+|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999998853 3 56777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 433
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.3e-33 Score=360.11 Aligned_cols=209 Identities=26% Similarity=0.403 Sum_probs=173.2
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccC
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1419)
.+.++|+++... +++.+|+|+|++++|||++||+|+||||||||+++|+|.. + .+|+|.+||.+.
T Consensus 349 ~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~i 413 (588)
T PRK11174 349 TIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIEL 413 (588)
T ss_pred eEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEec
Confidence 578888875431 2346999999999999999999999999999999999986 3 489999999886
Q ss_pred Cc---ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-------ccCCcccCCC
Q 000562 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-------LSGALIGLPG 965 (1419)
Q Consensus 896 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-------~~~~~~g~~~ 965 (1419)
.+ ..+++.++||+|++.++.. |++||+.++. | +.+. +.++++++..++.+ -.|+.+|..+
T Consensus 414 ~~~~~~~lr~~i~~v~Q~~~LF~~-TI~eNI~~g~----~-~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 414 RELDPESWRKHLSWVGQNPQLPHG-TLRDNVLLGN----P-DASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred ccCCHHHHHhheEEecCCCcCCCc-CHHHHhhcCC----C-CCCH----HHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 53 5677899999999988864 9999998752 1 2232 33566666666543 3467777654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000562 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1419)
Q Consensus 966 ~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1045 (1419)
..||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 484 -~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~- 558 (588)
T PRK11174 484 -AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD- 558 (588)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC-
Confidence 4699999999999999999999999999999999999999999999875 5899999999975 5678999999985
Q ss_pred CEEEEeCCC
Q 000562 1046 GELIYAGPL 1054 (1419)
Q Consensus 1046 G~~~~~G~~ 1054 (1419)
|+++..|+.
T Consensus 559 G~i~e~G~~ 567 (588)
T PRK11174 559 GQIVQQGDY 567 (588)
T ss_pred CeEeecCCH
Confidence 799999874
No 434
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-33 Score=300.09 Aligned_cols=157 Identities=29% Similarity=0.447 Sum_probs=142.0
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCccH
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
..+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+|+
T Consensus 13 ~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (173)
T cd03230 13 KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTV 90 (173)
T ss_pred eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccchHhhhccEEEEecCCccccCCcH
Confidence 469999999999999999999999999999999999865 458999999987543 2345679999999988888999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+|++. ||||||||++||++|+.+|++++|||||+||
T Consensus 91 ~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~L 126 (173)
T cd03230 91 RENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGL 126 (173)
T ss_pred HHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCC
Confidence 99873 8999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000562 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1045 (1419)
|+.++..+.+.|++++++|.|+|+++|+++ ++.+.+|++++|++|
T Consensus 127 D~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 127 DPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999877999999999976 466789999999864
No 435
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-33 Score=315.10 Aligned_cols=211 Identities=20% Similarity=0.266 Sum_probs=167.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcC--CCCCeeeEEEECCccCCCCC-----CCceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 220 (1419)
+++|+|+|+++++|++++|+||||||||||+++|+|..+ +..+.+|+|.++|+++.... .++.++|++|++.+
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 95 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNP 95 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHhhheEEEecCCcc
Confidence 359999999999999999999999999999999999732 21124899999999875421 23579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1419)
++ .||+||+.++....+... . + .....++++++.+||.+...+..
T Consensus 96 ~~-~tv~~nl~~~~~~~~~~~--~--------~-----------------------~~~~~~~~~l~~~~l~~~~~~~~- 140 (250)
T PRK14245 96 FP-KSIFENVAYGLRVNGVKD--N--------A-----------------------FIRQRVEETLKGAALWDEVKDKL- 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCc--H--------H-----------------------HHHHHHHHHHHHcCCCcchhhhh-
Confidence 76 699999987643221100 0 0 01123567888899864322222
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 380 (1419)
+...+.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+++|++++
T Consensus 141 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~v~~ 217 (250)
T PRK14245 141 KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK--D-YTIVIVTHNMQQAARVSDKTAF 217 (250)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHhhCCEEEE
Confidence 234457999999999999999999999999999999999999999999999842 3 5677788999999999999999
Q ss_pred EcCCeEEEEcChhhHH
Q 000562 381 LSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1419)
|++|++++.|+++++.
T Consensus 218 l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 218 FYMGEMVEYDDTKKIF 233 (250)
T ss_pred EECCEEEEECCHHHHh
Confidence 9999999999998874
No 436
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-33 Score=315.55 Aligned_cols=207 Identities=22% Similarity=0.294 Sum_probs=164.0
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCC--C-ceEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
.+.+|+|+|+++++||++||+|+||||||||+++|+|... + .+.+|+|.++|.+... ...++.++|++|++.
T Consensus 17 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (252)
T PRK14255 17 KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPN 96 (252)
T ss_pred CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCc
Confidence 3569999999999999999999999999999999999643 1 1247999999987531 234567999999988
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+++ .|++||+.+....+... ..+..++.+.+.++.+++........ ...+..||+|||||++||++|+.+|++++|
T Consensus 97 ~~~-~tv~~nl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~i~~~~-~~~~~~LS~Gq~qrv~laral~~~p~llll 172 (252)
T PRK14255 97 PFP-FSIYENVIYGLRLAGVK--DKAVLDEAVETSLKQAAIWDEVKDHL-HESALSLSGGQQQRVCIARVLAVKPDVILL 172 (252)
T ss_pred cCC-CcHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHHcCCccchhhHH-hcCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 887 69999998865433211 12222345667788877642111111 112457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.++..+.+.|+++++ +.|||+++|+++ .+.+.+|++++|++ |+++..|+.
T Consensus 173 DEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 231 (252)
T PRK14255 173 DEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFLT-GNLIEFADT 231 (252)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999865 589999999986 46778999999985 799988874
No 437
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-33 Score=320.41 Aligned_cols=201 Identities=23% Similarity=0.306 Sum_probs=164.3
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC---ceEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
++.+|+|+|++|++||+++|+|+||||||||+++|+|.... .+.+|+|.++|.+... ...++.++|++|++.
T Consensus 51 ~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~~~~~~~i~~v~q~~~ 130 (285)
T PRK14254 51 DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDPVALRRRIGMVFQKPN 130 (285)
T ss_pred CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccchHhhhccEEEEecCCc
Confidence 35699999999999999999999999999999999998542 1358999999987532 234668999999988
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ 988 (1419)
+++. ||+||+.+....+. ... ...+.++++++.+++.+ ..+.. +..||||||||++||++|+.+|+
T Consensus 131 l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~-----~~~LSgGe~qrv~LAraL~~~p~ 200 (285)
T PRK14254 131 PFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS-----GLDLSGGQQQRLCIARAIAPDPE 200 (285)
T ss_pred cCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC-----cccCCHHHHHHHHHHHHHHcCCC
Confidence 7775 99999988654432 111 23456788999998853 22332 45799999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEE-EEecCCEEEEeCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELL-FMKRGGELIYAGPL 1054 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~-~l~~gG~~~~~G~~ 1054 (1419)
||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+...+|+++ +|+ .|+++..|+.
T Consensus 201 lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l~-~G~i~~~g~~ 264 (285)
T PRK14254 201 VILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFLT-GGELVEFDDT 264 (285)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEee-CCEEEEeCCH
Confidence 9999999999999999999999999976 489999999976 4667899976 456 5899988874
No 438
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-33 Score=316.08 Aligned_cols=207 Identities=24% Similarity=0.319 Sum_probs=167.9
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCC--CeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
++|+|+|+.+++||+++|+|||||||||||++|+|.+.+.. +.+|+|.++|+++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 59999999999999999999999999999999999986421 3599999999876421 1246799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcc----cccc
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT----CADT 297 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 297 (1419)
+.+||+||+.++....+.... ......++.+++.+||.. ..++
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRNK---------------------------------KDLDELVEKSLRGANLWNEVKDRLDK 144 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhHhhC
Confidence 999999999876432210000 001123566788888842 2333
Q ss_pred cccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000562 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1419)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 377 (1419)
.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+..++.+++|+
T Consensus 145 -----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~~~~~~~~~d~ 216 (258)
T PRK14241 145 -----PGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHNMQQAARVSDQ 216 (258)
T ss_pred -----CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhCCE
Confidence 3457999999999999999999999999999999999999999999998853 3 5677788999999999999
Q ss_pred EEEEc------CCeEEEEcChhhHH
Q 000562 378 VILLS------EGQIVYQGPRVSVL 396 (1419)
Q Consensus 378 vilL~------~G~iv~~G~~~~~~ 396 (1419)
|++|+ +|++++.|+++++.
T Consensus 217 i~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 217 TAFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEEEecccCCCCceEEecCCHHHHH
Confidence 99997 79999999987763
No 439
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=7.3e-33 Score=315.44 Aligned_cols=207 Identities=24% Similarity=0.327 Sum_probs=165.7
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc---cccc-eEEEEccCCCCCCCc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---TFAR-ISGYCEQNDIHSPGL 917 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~~~-~~gyv~Q~d~~~~~l 917 (1419)
+.+|+|||+++++||++||+|+||||||||+++|+|.....+.+|+|.++|.+.... ..++ .++|++|++.+++.+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~q~~~~~~~~ 99 (252)
T CHL00131 20 NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHLGIFLAFQYPIEIPGV 99 (252)
T ss_pred EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhheeeEEEEeccccccccc
Confidence 469999999999999999999999999999999999621124689999999875431 2222 478999999999999
Q ss_pred cHHHHHHHHhhhcCC----CCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 918 TVLESLLFSAWLRLP----SEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~----~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
|+.|++.+....... .+....+..+.++++++.+++. +..+...+ ..||||||||++||++|+.+|+|++|
T Consensus 100 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LSgG~~qrv~la~al~~~p~llll 175 (252)
T CHL00131 100 SNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN----EGFSGGEKKRNEILQMALLDSELAIL 175 (252)
T ss_pred cHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----cCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 999999875432110 1111222345678889999986 34444322 25999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHh-cCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.++..+.+.|++++++|+|||+++|+++. +... +|++++|++ |++++.|+.
T Consensus 176 DEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 236 (252)
T CHL00131 176 DETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL-LDYIKPDYVHVMQN-GKIIKTGDA 236 (252)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHhhhCCEEEEEeC-CEEEEecCh
Confidence 99999999999999999999998779999999999763 4444 799999985 899999986
No 440
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-33 Score=317.19 Aligned_cols=211 Identities=21% Similarity=0.304 Sum_probs=167.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
.+|+|+|+.|++|++++|+|||||||||||++|+|.+++. .+.+|+|+++|+++... ..++.++|++|++..+
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 112 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPF 112 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCC
Confidence 5999999999999999999999999999999999998641 13589999999887532 1246799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+. ||.||+.|+....+.... + .+....++.+++.+||.+...... +
T Consensus 113 ~~-tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 158 (267)
T PRK14235 113 PK-SIYENVAYGPRIHGLARS--------K------------------------AELDEIVETSLRKAGLWEEVKDRL-H 158 (267)
T ss_pred CC-cHHHHHHHHHHhcccccc--------h------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 74 999999886533211000 0 001123567888889864211111 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
..++.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|+..++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d~v~~l 235 (267)
T PRK14235 159 EPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQRTAFF 235 (267)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998854 3 56777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|+++.+|+.+++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 236 HLGNLVEVGDTEKMF 250 (267)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999887763
No 441
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=348.15 Aligned_cols=204 Identities=27% Similarity=0.345 Sum_probs=171.0
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc----ccccceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d~~~~~ 916 (1419)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+++.
T Consensus 16 ~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 16 GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 3569999999999999999999999999999999999865 468999999987532 1235679999999988999
Q ss_pred ccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 917 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
+||+||+.+....+........+.++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||
T Consensus 94 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~laral~~~p~lllLDEPt 168 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSIGQRQMVEIAKALARNARVIAFDEPT 168 (501)
T ss_pred CCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 999999988532111111123334556889999999986666543 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCC
Q 000562 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 1053 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1053 (1419)
+|||+.+...+.+.|++++++|+|||+++|+++ ++...+|++++|++ |+++..++
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~~~ 223 (501)
T PRK11288 169 SSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVATFD 223 (501)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecC
Confidence 999999999999999999888999999999986 56678999999985 78887665
No 442
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.9e-33 Score=329.33 Aligned_cols=226 Identities=26% Similarity=0.384 Sum_probs=191.6
Q ss_pred cccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc----ccccceEEEE
Q 000562 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYC 907 (1419)
Q Consensus 832 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv 907 (1419)
+++.++.++..++|+|||++++|||++||||.||||||||+|+|+|..+ +.+|+|.+||.+... .....-++.|
T Consensus 11 ~~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~~~~sp~~A~~~GI~~V 88 (500)
T COG1129 11 LRGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPVAFSSPRDALAAGIATV 88 (500)
T ss_pred eecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEccCCCHHHHHhCCcEEE
Confidence 4455556677899999999999999999999999999999999999876 569999999987642 2334568999
Q ss_pred ccCCCCCCCccHHHHHHHHhhhcCC-CCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000562 908 EQNDIHSPGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1419)
Q Consensus 908 ~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~ 986 (1419)
.|+..+.|++||.||+.++...+.+ .-++.+...+...++++.+++....++.++ .||+||||.|.|||||..+
T Consensus 89 ~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~-----~LsiaqrQ~VeIArAl~~~ 163 (500)
T COG1129 89 HQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVG-----DLSIAQRQMVEIARALSFD 163 (500)
T ss_pred eechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhh-----hCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999877544432 224556667788999999999644666654 7999999999999999999
Q ss_pred CCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC-CC-chhHHHHH
Q 000562 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL-GS-KSCELIKY 1064 (1419)
Q Consensus 987 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~-~~-~~~~~~~~ 1064 (1419)
++||+||||||.|+......+.+.++++.++|.+||.+||.++ ++++.+||+.||.+ |+.+..++. ++ +.+++++.
T Consensus 164 arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~~~~~~~~~~~~~lv~~ 241 (500)
T COG1129 164 ARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVGTRPTAAETSEDELVRL 241 (500)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEeeecccccCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999987 89999999999986 799998883 44 44456655
Q ss_pred HH
Q 000562 1065 FE 1066 (1419)
Q Consensus 1065 f~ 1066 (1419)
.-
T Consensus 242 Mv 243 (500)
T COG1129 242 MV 243 (500)
T ss_pred hh
Confidence 43
No 443
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.3e-31 Score=348.29 Aligned_cols=210 Identities=23% Similarity=0.416 Sum_probs=174.0
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccC
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1419)
.+.++|+++.++ +++.+|+|+|++|+|||.+||+|+||||||||+++|+|... +.+|+|.+||.++
T Consensus 473 ~I~~~~vsf~y~------------~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~i 538 (708)
T TIGR01193 473 DIVINDVSYSYG------------YGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFSL 538 (708)
T ss_pred cEEEEEEEEEcC------------CCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEEH
Confidence 577888877653 12469999999999999999999999999999999999876 5689999999886
Q ss_pred Cc---ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-------ccCCcccCCC
Q 000562 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-------LSGALIGLPG 965 (1419)
Q Consensus 896 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-------~~~~~~g~~~ 965 (1419)
.+ ..+++.+|||+|++.+++. |++||+.++.. .+.+. +.++++++..++.+ -.|+.+|..+
T Consensus 539 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~----~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G 609 (708)
T TIGR01193 539 KDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAK----ENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEEG 609 (708)
T ss_pred HHcCHHHHHHheEEEecCceehhH-HHHHHHhccCC----CCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCCC
Confidence 43 4677889999999988865 99999987521 12222 23566666666643 2356676543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000562 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1419)
Q Consensus 966 ~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1045 (1419)
.+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 610 -~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~- 683 (708)
T TIGR01193 610 -SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH- 683 (708)
T ss_pred -CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999985 5899999999986 5688999999985
Q ss_pred CEEEEeCCC
Q 000562 1046 GELIYAGPL 1054 (1419)
Q Consensus 1046 G~~~~~G~~ 1054 (1419)
|+++..|+.
T Consensus 684 G~i~~~G~~ 692 (708)
T TIGR01193 684 GKIIEQGSH 692 (708)
T ss_pred CEEEEECCH
Confidence 799999984
No 444
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-33 Score=316.14 Aligned_cols=210 Identities=20% Similarity=0.308 Sum_probs=166.5
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcC--CCCCeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
++|+|+|++|++||+++|+|||||||||||++|+|.+. |..+.+|+|+++|+++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 59999999999999999999999999999999999986 3223589999999987431 1245799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+. ||+||+.|.....+.... .+....++.+++.+||.+...... +
T Consensus 106 ~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~ 150 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKNK---------------------------------KKLQEIVEKSLKDVALWDEVKDRL-H 150 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhhh-h
Confidence 75 999999876432211000 001123556777888753211111 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
...+.||||||||++|||+|+.+|++++|||||+|||..++..+.+.|+++.. +.+++.++|+..++.+++|++++|
T Consensus 151 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~i~~l 227 (259)
T PRK14274 151 TQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE---KYTIVIVTHNMQQAARVSDQTAFF 227 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEEcCHHHHHHhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999998853 356667889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|+++.+|+++++.
T Consensus 228 ~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 228 YMGELVECNDTNKMF 242 (259)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999988763
No 445
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-33 Score=314.49 Aligned_cols=212 Identities=21% Similarity=0.288 Sum_probs=168.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcC--CCCCeeeEEEECCccCCCCC-----CCceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 220 (1419)
+++|+|+|+++++|++++|+||||||||||+++|+|... +..+.+|+|+++|.++.... .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 369999999999999999999999999999999999875 22235899999998764321 24679999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1419)
++. ||+||+.+.....+.....+ .....++.+++.+||.+...+.+
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~- 143 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKNKK--------------------------------KLDEIVEKSLTSVGLWEELGDRL- 143 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCCHH--------------------------------HHHHHHHHHHHHcCCCchhhhHh-
Confidence 775 99999987633221100000 01123567788899865322222
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 380 (1419)
+...+.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +.+|+.++|+..++.+++|+|++
T Consensus 144 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tiiiisH~~~~~~~~~d~i~~ 220 (251)
T PRK14244 144 KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKK---NFTIIVVTHSMKQAKKVSDRVAF 220 (251)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHhhcCEEEE
Confidence 234457999999999999999999999999999999999999999999998742 46677788999999999999999
Q ss_pred EcCCeEEEEcChhhHH
Q 000562 381 LSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1419)
|++|++++.|+.+++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999887763
No 446
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-33 Score=320.44 Aligned_cols=204 Identities=24% Similarity=0.415 Sum_probs=165.0
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCC--CCccH
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHS--PGLTV 919 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~--~~lTv 919 (1419)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+......++.++|++|++.+. ...++
T Consensus 20 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~i~~v~q~~~~~~~~~~~~ 97 (272)
T PRK15056 20 HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPTRQALQKNLVAYVPQSEEVDWSFPVLV 97 (272)
T ss_pred cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEhHHhhccceEEEeccccccccCCCcch
Confidence 469999999999999999999999999999999999866 46899999998764332334689999997642 23578
Q ss_pred HHHHHHHhhhcCC-CCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCC
Q 000562 920 LESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1419)
Q Consensus 920 ~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsg 998 (1419)
+|++.+....... .........+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++++|||||+|
T Consensus 98 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrv~laraL~~~p~llllDEPt~~ 172 (272)
T PRK15056 98 EDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGGQKKRVFLARAIAQQGQVILLDEPFTG 172 (272)
T ss_pred hhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCcc
Confidence 8988654211000 00111223445778899999988777654 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|+..
T Consensus 173 LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g~~~ 226 (272)
T PRK15056 173 VDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASGPTE 226 (272)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHH
Confidence 9999999999999999877999999999976 567889999766 4 7999999864
No 447
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-32 Score=312.93 Aligned_cols=210 Identities=20% Similarity=0.263 Sum_probs=163.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcC--CCCCeeeEEEECCccCCCCC-----CCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 221 (1419)
++|+|+|+.+++||+++|+|||||||||||++|+|..+ +..+.+|+|.++|+++.... .++.++|++|++.++
T Consensus 35 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 114 (268)
T PRK14248 35 RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREIGMVFQKPNPF 114 (268)
T ss_pred eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccEEEEecCCccC
Confidence 59999999999999999999999999999999999764 21135899999999875321 245799999999877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+. ||+||+.++....+.. .+ . ..+..++..++.+++........ +
T Consensus 115 ~~-tv~enl~~~~~~~~~~--~~---~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 159 (268)
T PRK14248 115 PK-SIYNNITHALKYAGER--RK---S----------------------------VLDEIVEESLTKAALWDEVKDRL-H 159 (268)
T ss_pred cc-cHHHHHHHHHHhcCCC--cH---H----------------------------HHHHHHHHHHHHcCCCcchHHHH-h
Confidence 75 9999998754321100 00 0 00112445667777742110111 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
..+..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+++|+|++|
T Consensus 160 ~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~v~~l 236 (268)
T PRK14248 160 SSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALRVSDRTAFF 236 (268)
T ss_pred cCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999999853 3 56777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|++++.|+.+++.
T Consensus 237 ~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 237 LNGDLVEYDQTEQIF 251 (268)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 448
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-33 Score=318.79 Aligned_cols=205 Identities=23% Similarity=0.260 Sum_probs=162.9
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCC---CceEEEEEEECCccCCc-----ccccceEEEEccCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT---GGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~---~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~ 913 (1419)
..+|+|+|++|++||++||+|+||||||||+++|+|..+ ..+.+|+|.++|.+... ..+++.++|++|++.+
T Consensus 37 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 116 (271)
T PRK14238 37 DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSVEELRTNVGMVFQKPNP 116 (271)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccHHHHhhhEEEEecCCcc
Confidence 458999999999999999999999999999999999753 11368999999987532 2345679999999888
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
++ .|++||+.+....+.. ...+..++.+.++++.+++.. +.+.. . ..+..||||||||++||++|+.+|++|+|
T Consensus 117 ~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~l~~~~-~-~~~~~LSgGe~qrv~laraL~~~p~lllL 191 (271)
T PRK14238 117 FP-KSIYDNVTYGPKIHGI--KDKKTLDEIVEKSLRGAAIWDELKDRL-H-DNAYGLSGGQQQRLCIARCLAIEPDVILM 191 (271)
T ss_pred cc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchHHHHH-h-cCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 77 4999999886543211 112222345667777765421 11111 1 12457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.+...+.+.|+++++ ++|||+++|+++ .+.+.+|++++|++ |+++..|+.
T Consensus 192 DEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~~-G~i~~~g~~ 250 (271)
T PRK14238 192 DEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFLN-GYVNEYDDT 250 (271)
T ss_pred eCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999875 799999999976 46678999999985 799998874
No 449
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=8.6e-33 Score=311.88 Aligned_cols=205 Identities=26% Similarity=0.403 Sum_probs=159.0
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC---CCceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1419)
+++|+|+|+++++||+++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.++ +.
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NR 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cc
Confidence 35999999999999999999999999999999999999775 999999998765432 245799999998766 57
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHh--CCcccccccccCc
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL--GLDTCADTLVGDE 302 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~ 302 (1419)
||+||+.+... . ...+...+... ....+..++.+ |++...+ .
T Consensus 91 tv~~nl~~~~~--~--~~~~~~~~~~~---------------------------~~~~~~~l~~l~~~~~~~~~-----~ 134 (237)
T cd03252 91 SIRDNIALADP--G--MSMERVIEAAK---------------------------LAGAHDFISELPEGYDTIVG-----E 134 (237)
T ss_pred hHHHHhhccCC--C--CCHHHHHHHHH---------------------------HcCcHHHHHhCcccccchhh-----c
Confidence 99999987432 1 00010000000 00012334444 4443333 3
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
.++.|||||||||+||||++.+|++++|||||+|||+.++..+.+.|+++++ +++|+.++|+..++ ..+|++++|+
T Consensus 135 ~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~-~~~d~v~~l~ 210 (237)
T cd03252 135 QGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA---GRTVIIIAHRLSTV-KNADRIIVME 210 (237)
T ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC---CCEEEEEeCCHHHH-HhCCEEEEEE
Confidence 4457999999999999999999999999999999999999999999998852 45566677888887 4699999999
Q ss_pred CCeEEEEcChhhHH
Q 000562 383 EGQIVYQGPRVSVL 396 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1419)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (237)
T cd03252 211 KGRIVEQGSHDELL 224 (237)
T ss_pred CCEEEEEcCHHHHH
Confidence 99999999987764
No 450
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=313.53 Aligned_cols=210 Identities=20% Similarity=0.313 Sum_probs=167.1
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCCCC-----CCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 221 (1419)
.+|+|+|+++++||+++|+|||||||||||++|+|..++. .+.+|+|.++|+++.... .++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14270 18 QALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNPF 97 (251)
T ss_pred eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCcC
Confidence 5999999999999999999999999999999999987642 135899999999875321 245699999999877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+ +|++||+.|.....+.... .+....++.+++.+||.+...... +
T Consensus 98 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 142 (251)
T PRK14270 98 P-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDDL-K 142 (251)
T ss_pred C-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-h
Confidence 6 8999999886433211000 001123556778888742110111 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
...+.||||||||++||++++.+|++++|||||+|||+.++.++.+.|+++.+ + ++++.++|+..++.+++|++++|
T Consensus 143 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d~v~~l 219 (251)
T PRK14270 143 KSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSDYTAFF 219 (251)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcCEEEEE
Confidence 34457999999999999999999999999999999999999999999998864 3 56677889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|++++.|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 220 LMGDLIEFNKTEKIF 234 (251)
T ss_pred ECCeEEEeCCHHHHh
Confidence 999999999988764
No 451
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=3.9e-33 Score=311.76 Aligned_cols=197 Identities=22% Similarity=0.338 Sum_probs=160.6
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGL 917 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~l 917 (1419)
++.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++ .
T Consensus 19 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~l~~-~ 95 (225)
T PRK10247 19 DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDISTLKPEIYRQQVSYCAQTPTLFG-D 95 (225)
T ss_pred CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEcCcCCHHHHHhccEEEeccccccc-c
Confidence 3569999999999999999999999999999999999865 468999999986532 234567899999988876 5
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPT 996 (1419)
|++||+.+....+.. . ..++.++++++.+++. ...+.. +..||+|||||++||++|+.+|++++|||||
T Consensus 96 tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 165 (225)
T PRK10247 96 TVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKN-----IAELSGGEKQRISLIRNLQFMPKVLLLDEIT 165 (225)
T ss_pred cHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 999999876443321 1 1124567899999995 344544 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
+|||+.+...+.+.|++++++ |.|||+++|+++. + +.+|++++|.+.+..+..|
T Consensus 166 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~i~~l~~~~~~~~~~ 220 (225)
T PRK10247 166 SALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADKVITLQPHAGEMQEA 220 (225)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCEEEEEecccchHhhh
Confidence 999999999999999998764 8999999999863 4 5699999996433344444
No 452
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.3e-32 Score=347.03 Aligned_cols=208 Identities=24% Similarity=0.341 Sum_probs=164.1
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
+++|+|+|++++||+.++|+||||||||||+++|+|.++|. +|+|.+||+++.+... ++.++||+|++.+++.
T Consensus 331 ~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~- 406 (544)
T TIGR01842 331 KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPT---SGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPG- 406 (544)
T ss_pred ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEehhhCCHHHHhhheEEecCCcccccc-
Confidence 35899999999999999999999999999999999999876 9999999999876543 4689999999987765
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
|++||+.+... ....+.+.++++. ...++.++. |++..||.+|+. .
T Consensus 407 ti~~Ni~~~~~----~~~~~~~~~~~~~---------------------------~~~~~~i~~--l~~gl~t~~~~~-g 452 (544)
T TIGR01842 407 TVAENIARFGE----NADPEKIIEAAKL---------------------------AGVHELILR--LPDGYDTVIGPG-G 452 (544)
T ss_pred cHHHHHhccCC----CCCHHHHHHHHHH---------------------------hChHHHHHh--CccccccccCCC-c
Confidence 99999975321 0111111111100 001233333 456678999864 5
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
++||||||||++||||++++|++++|||||||||+.++.++.+.|+++.. .++ +++.++|+.+ ..+.+|+|++|++|
T Consensus 453 ~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~-~~~-tvi~ith~~~-~~~~~d~i~~l~~G 529 (544)
T TIGR01842 453 ATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA-RGI-TVVVITHRPS-LLGCVDKILVLQDG 529 (544)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhh-CCC-EEEEEeCCHH-HHHhCCEEEEEECC
Confidence 68999999999999999999999999999999999999999999998753 234 4555666665 45789999999999
Q ss_pred eEEEEcChhhHH
Q 000562 385 QIVYQGPRVSVL 396 (1419)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1419)
++++.|+++++.
T Consensus 530 ~i~~~g~~~~l~ 541 (544)
T TIGR01842 530 RIARFGERDEVL 541 (544)
T ss_pred EEEeeCCHHHHh
Confidence 999999988774
No 453
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=314.10 Aligned_cols=205 Identities=25% Similarity=0.319 Sum_probs=165.9
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC--c--eEEEEEEECCccCC---cccccceEEEEccCCC
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G--IIEGDIYISGYPKR---QETFARISGYCEQNDI 912 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~--~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~d~ 912 (1419)
+++.+|+|+|+++++||+++|+|+||||||||+++|+|.... | .+.|++.++|.+.. ...+++.++|++|++.
T Consensus 21 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~~~~~i~~~~q~~~ 100 (257)
T PRK14246 21 NDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIKLRKEVGMVFQQPN 100 (257)
T ss_pred CCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHHHhcceEEEccCCc
Confidence 456799999999999999999999999999999999997542 1 12366666666542 1234567999999999
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc----ccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ 988 (1419)
+++.+|++||+.+....... ...++..+.++++++.+++.+ ..+.. +..||+|||||++|||+|+.+|+
T Consensus 101 ~~~~~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~LS~G~~qrl~laral~~~P~ 173 (257)
T PRK14246 101 PFPHLSIYDNIAYPLKSHGI--KEKREIKKIVEECLRKVGLWKEVYDRLNSP-----ASQLSGGQQQRLTIARALALKPK 173 (257)
T ss_pred cCCCCcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCCccchhhhcCC-----cccCCHHHHHHHHHHHHHHcCCC
Confidence 99999999999887433211 122334456788999999864 22332 45799999999999999999999
Q ss_pred cceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+++|||||+|||..+...+.+.|+++++ ++|||+++|+++ .+.+.+|++++|++ |+++..|+.
T Consensus 174 llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~-g~i~~~g~~ 236 (257)
T PRK14246 174 VLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN-GELVEWGSS 236 (257)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999999999999864 699999999976 46688999999985 799998875
No 454
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=7.7e-33 Score=315.38 Aligned_cols=203 Identities=27% Similarity=0.308 Sum_probs=164.0
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCcc-----CCc---c----cccceEEEEc
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP-----KRQ---E----TFARISGYCE 908 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~-----~~~---~----~~~~~~gyv~ 908 (1419)
...+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+ ... . ..++.++|++
T Consensus 15 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 92 (253)
T TIGR02323 15 GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSGAELELYQLSEAERRRLMRTEWGFVH 92 (253)
T ss_pred CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccccccccccCCHHHHHHhhhcceEEEE
Confidence 3468999999999999999999999999999999999876 468999999976 321 1 1234689999
Q ss_pred cCCC--CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCcc-ccCCcccCCCCCCCCHHHHHHHHHHHHHhh
Q 000562 909 QNDI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVA 985 (1419)
Q Consensus 909 Q~d~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~ 985 (1419)
|++. ..+.+|+.|++.+..... .. .......+.++++++.+++.+ ..+.. ++.||||||||++|||+|+.
T Consensus 93 q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~-----~~~LSgG~~qrv~laral~~ 165 (253)
T TIGR02323 93 QNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL-----PRAFSGGMQQRLQIARNLVT 165 (253)
T ss_pred eCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC-----chhcCHHHHHHHHHHHHHhc
Confidence 9874 345679999987543211 10 111223456788999999963 45543 35799999999999999999
Q ss_pred CCCcceeeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 986 NPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 986 ~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. .+.+.+|++++|++ |+++..|+.
T Consensus 166 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 166 RPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLLVMQQ-GRVVESGLT 233 (253)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEECCH
Confidence 99999999999999999999999999998754 899999999976 46678999999985 799998874
No 455
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=314.98 Aligned_cols=208 Identities=20% Similarity=0.283 Sum_probs=163.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
.+|+|+|++|++||+++|+|||||||||||++|+|.+++. .+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 27 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 106 (269)
T PRK14259 27 EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNPF 106 (269)
T ss_pred EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCccc
Confidence 5999999999999999999999999999999999987631 13599999999876421 1235699999999877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+ .||+||+.+++...+.. + + ....++.+++.+++....+... +
T Consensus 107 ~-~tv~enl~~~~~~~~~~---~---~-----------------------------~~~~~~~~l~~~~l~~~l~~~~-~ 149 (269)
T PRK14259 107 P-KSIYENIAFGARINGYT---G---D-----------------------------MDELVERSLRKAAVWDECKDKL-N 149 (269)
T ss_pred h-hhHHHHHhhhhhhcCCc---H---H-----------------------------HHHHHHHHHHHhCCcchhhhhh-C
Confidence 7 59999998865432110 0 0 0112345666676642111111 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
.....|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ +++|+.++|+..++.+++|++++|
T Consensus 150 ~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~i~~l 226 (269)
T PRK14259 150 ESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK---NFTIVIVTHNMQQAVRVSDMTAFF 226 (269)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEEEEE
Confidence 33457999999999999999999999999999999999999999999998853 356777899999999999999999
Q ss_pred cC-----------CeEEEEcChhhHH
Q 000562 382 SE-----------GQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~-----------G~iv~~G~~~~~~ 396 (1419)
++ |++++.|+++++.
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~~~~~ 252 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNETKKIF 252 (269)
T ss_pred eccccccccccccceEEEeCCHHHHH
Confidence 96 6789999988874
No 456
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1e-32 Score=315.03 Aligned_cols=198 Identities=24% Similarity=0.271 Sum_probs=161.2
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1419)
.+|+|+|+.|++||+++|+|||||||||||++|+|.++ . +|+|.++|.++..... ++.++||+|++.+++ .|
T Consensus 18 ~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~---~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~-~t 92 (275)
T cd03289 18 AVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-T---EGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFS-GT 92 (275)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C---CcEEEECCEEhhhCCHHHHhhhEEEECCCcccch-hh
Confidence 48999999999999999999999999999999999985 3 7999999998765432 467999999999886 59
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCC-------ccccccc
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL-------DTCADTL 298 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL-------~~~~dt~ 298 (1419)
|+||+..... ...+ .+...++.+|| +...||.
T Consensus 93 v~~nl~~~~~-----~~~~------------------------------------~~~~~l~~~gL~~~~~~~p~~l~~~ 131 (275)
T cd03289 93 FRKNLDPYGK-----WSDE------------------------------------EIWKVAEEVGLKSVIEQFPGQLDFV 131 (275)
T ss_pred HHHHhhhccC-----CCHH------------------------------------HHHHHHHHcCCHHHHHhCcccccce
Confidence 9999963211 0000 01222333343 3445677
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
+++ ..+.||||||||++||||++.+|++++|||||++||+.+...+.+.|++.. .+++|++++|....+. .+|+|
T Consensus 132 ~~~-~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~---~~~tii~isH~~~~i~-~~dri 206 (275)
T cd03289 132 LVD-GGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF---ADCTVILSEHRIEAML-ECQRF 206 (275)
T ss_pred ecC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc---CCCEEEEEECCHHHHH-hCCEE
Confidence 765 567899999999999999999999999999999999999999999999763 2466777888887775 49999
Q ss_pred EEEcCCeEEEEcChhhHHH
Q 000562 379 ILLSEGQIVYQGPRVSVLD 397 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~~ 397 (1419)
++|++|++++.|++++++.
T Consensus 207 ~vl~~G~i~~~g~~~~l~~ 225 (275)
T cd03289 207 LVIEENKVRQYDSIQKLLN 225 (275)
T ss_pred EEecCCeEeecCCHHHHhh
Confidence 9999999999999999864
No 457
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.5e-33 Score=316.29 Aligned_cols=196 Identities=26% Similarity=0.421 Sum_probs=154.8
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCcc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++ .|
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-RS 91 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-ch
Confidence 468999999999999999999999999999999999876 458999999987532 234567999999987764 69
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHH-----HHHHHHHHHc--CCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 000562 919 VLESLLFSAWLRLPSEIELETQR-----AFVEEVMELV--ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~-----~~v~~vl~~l--~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ill 991 (1419)
|+||+.+... ........ ...++.++.+ ++....+. .+..|||||||||+|||+|+.+|++++
T Consensus 92 v~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-----~~~~LSgG~~qrv~laral~~~p~lll 161 (237)
T cd03252 92 IRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGE-----QGAGLSGGQRQRIAIARALIHNPRILI 161 (237)
T ss_pred HHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhc-----CCCcCCHHHHHHHHHHHHHhhCCCEEE
Confidence 9999976431 11111100 0112233333 23222222 246899999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||||+|||+.+...+.+.|++++ +|+|||+++|+++ ++ +.+|++++|.+ |++++.|+.
T Consensus 162 lDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (237)
T cd03252 162 FDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVMEK-GRIVEQGSH 220 (237)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999986 4899999999986 34 56999999985 799999875
No 458
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.9e-33 Score=307.61 Aligned_cols=186 Identities=28% Similarity=0.360 Sum_probs=157.0
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHH
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVL 920 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~ 920 (1419)
+..+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+......++.++|++|++.+++.+|++
T Consensus 14 ~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~tv~ 91 (207)
T PRK13539 14 GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDIDDPDVAEACHYLGHRNAMKPALTVA 91 (207)
T ss_pred CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCcchhhHhhcEEecCCCcCCCCCcHH
Confidence 4569999999999999999999999999999999999865 46899999998653222566789999998888899999
Q ss_pred HHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCC
Q 000562 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1419)
Q Consensus 921 E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD 1000 (1419)
|++.+....+. .. .+.++++++.+++.+..+... +.||||||||++||++|+.+|++++|||||+|||
T Consensus 92 ~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD 159 (207)
T PRK13539 92 ENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRRVALARLLVSNRPIWILDEPTAALD 159 (207)
T ss_pred HHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 99987654321 11 134788999999987665543 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEe
Q 000562 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1419)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1043 (1419)
+.+...+.+.|++++++|+|||+++|++. ++ .. |+++.+.
T Consensus 160 ~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~-~~-~~~~~~~ 199 (207)
T PRK13539 160 AAAVALFAELIRAHLAQGGIVIAATHIPL-GL-PG-ARELDLG 199 (207)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCch-hh-cc-CcEEeec
Confidence 99999999999998878999999999975 33 34 8887774
No 459
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.8e-33 Score=362.52 Aligned_cols=208 Identities=28% Similarity=0.409 Sum_probs=175.1
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccC
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1419)
.+.++|+++.++. +++.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+.
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEc
Confidence 5788888877631 23469999999999999999999999999999999999876 5689999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccc-------cCCcccCCC
Q 000562 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1419)
Q Consensus 896 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~~g~~~ 965 (1419)
.+ ..+++.+|||+|++.+++. |++||+.++. + .+ ++.++++++..++.+. .|+.+|..+
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G 586 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMSG-SIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEGG 586 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCcc-cHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCCC
Confidence 53 4678889999999988764 9999998742 1 22 2346777887777643 356666543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000562 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1419)
Q Consensus 966 ~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1045 (1419)
.+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|+|++|++
T Consensus 587 -~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~- 659 (686)
T TIGR03797 587 -GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA- 659 (686)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999886 689999999975 5678999999985
Q ss_pred CEEEEeCCC
Q 000562 1046 GELIYAGPL 1054 (1419)
Q Consensus 1046 G~~~~~G~~ 1054 (1419)
|+++..|+.
T Consensus 660 G~iv~~G~~ 668 (686)
T TIGR03797 660 GRVVQQGTY 668 (686)
T ss_pred CEEEEECCH
Confidence 899999985
No 460
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-32 Score=274.44 Aligned_cols=202 Identities=25% Similarity=0.378 Sum_probs=171.7
Q ss_pred CCCcceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC-------CceEEEEc
Q 000562 143 GNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVS 215 (1419)
Q Consensus 143 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~ 215 (1419)
....+.+||++|++.|++||-++|+|||||||||||-+|+|+-.++ +|+|.+.|+++..+.. .+.+|+|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 3446789999999999999999999999999999999999998776 9999999999876542 37899999
Q ss_pred cCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccc
Q 000562 216 QQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 295 (1419)
Q Consensus 216 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 295 (1419)
|.-.++|+||..||+...+.+++.+.+ +........|+.+||.+..
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~----------------------------------~~~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSA----------------------------------DSRAGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCccc----------------------------------cHHHHHHHHHHHhCccccc
Confidence 999999999999999988777653221 0112356688999998876
Q ss_pred cccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhc
Q 000562 296 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 375 (1419)
Q Consensus 296 dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 375 (1419)
+-. +.+|||||+|||+||||+...|+|||-||||-.||..|..+|.+.|..+.+.. +++++.++|+ +....-|
T Consensus 141 ~Hy-----P~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~-G~TlVlVTHD-~~LA~Rc 213 (228)
T COG4181 141 THY-----PAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRER-GTTLVLVTHD-PQLAARC 213 (228)
T ss_pred ccC-----ccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhc-CceEEEEeCC-HHHHHhh
Confidence 544 45799999999999999999999999999999999999999999999998764 5667667666 4566789
Q ss_pred CeEEEEcCCeEEE
Q 000562 376 DDVILLSEGQIVY 388 (1419)
Q Consensus 376 D~vilL~~G~iv~ 388 (1419)
||++-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999874
No 461
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-33 Score=316.40 Aligned_cols=195 Identities=27% Similarity=0.378 Sum_probs=156.5
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCccH
Q 000562 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 843 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++ .|+
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 68999999999999999999999999999999999876 468999999986532 234567999999988776 699
Q ss_pred HHHHHHHhhhcCCCCCcHHHH-----HHHHHHHHHHc--CCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 920 LESLLFSAWLRLPSEIELETQ-----RAFVEEVMELV--ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~-----~~~v~~vl~~l--~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+||+.+.... ...... ...+++.++.+ ++.+..+.. +..||+|||||++||++|+.+|++++|
T Consensus 93 ~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllL 162 (234)
T cd03251 93 AENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GVKLSGGQRQRIAIARALLKDPPILIL 162 (234)
T ss_pred HHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999875321 111111 11234444444 444443332 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.+...+.+.|+++. +|+|||+++|+++ ++ +.+|++++|.+ |+++..|+.
T Consensus 163 DEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (234)
T cd03251 163 DEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLED-GKIVERGTH 220 (234)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEecC-CeEeeeCCH
Confidence 99999999999999999999986 4899999999986 34 45999999986 788888874
No 462
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.9e-33 Score=379.43 Aligned_cols=213 Identities=24% Similarity=0.363 Sum_probs=168.5
Q ss_pred ceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--------------------------------------
Q 000562 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-------------------------------------- 188 (1419)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-------------------------------------- 188 (1419)
+.+||+|+|++|+||+.+||+||||||||||+++|.|+++|.
T Consensus 1180 ~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 (1466)
T PTZ00265 1180 NVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFS 1259 (1466)
T ss_pred CCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccc
Confidence 346999999999999999999999999999999999999872
Q ss_pred -------------CCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHH
Q 000562 189 -------------LQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARR 252 (1419)
Q Consensus 189 -------------~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ 252 (1419)
.+.+|+|++||+++++... ++.++||+|++.+| +.||+|||.++.. ....+.+.++++.
T Consensus 1260 ~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIreNI~~g~~----~at~eeI~~A~k~ 1334 (1466)
T PTZ00265 1260 LTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIYENIKFGKE----DATREDVKRACKF 1334 (1466)
T ss_pred cccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHHHHHhcCCC----CCCHHHHHHHHHH
Confidence 0248999999999987654 57899999999866 6799999998632 1111112222211
Q ss_pred HHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEec
Q 000562 253 EKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDE 332 (1419)
Q Consensus 253 e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDE 332 (1419)
++ .++. +-.|++.+||.||+. ..+||||||||++|||||+++|+||+|||
T Consensus 1335 ---A~------------------------l~~f--I~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLLDE 1384 (1466)
T PTZ00265 1335 ---AA------------------------IDEF--IESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLLDE 1384 (1466)
T ss_pred ---cC------------------------CHHH--HHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 00 0111 235889999999965 45799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC----CeEE-EEcChhhHH
Q 000562 333 ISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE----GQIV-YQGPRVSVL 396 (1419)
Q Consensus 333 ptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~----G~iv-~~G~~~~~~ 396 (1419)
|||+||+.++..|.+.|++.....++| +|++.|.. ...+.+|+|++|++ |+++ ++|++++++
T Consensus 1385 aTSaLD~~sE~~I~~~L~~~~~~~~~T-vIiIaHRl-sti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl 1451 (1466)
T PTZ00265 1385 ATSSLDSNSEKLIEKTIVDIKDKADKT-IITIAHRI-ASIKRSDKIVVFNNPDRTGSFVQAHGTHEELL 1451 (1466)
T ss_pred cccccCHHHHHHHHHHHHHHhccCCCE-EEEEechH-HHHHhCCEEEEEeCCCCCCCEEEEecCHHHHH
Confidence 999999999999999999874222345 44466666 44577999999999 9955 899999986
No 463
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-32 Score=312.02 Aligned_cols=210 Identities=23% Similarity=0.348 Sum_probs=165.3
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCC--CCCeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
++|+|+|++|++||+++|+|||||||||||++|+|.+++ ..+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 599999999999999999999999999999999998753 223589999999987531 1245799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+ +||+||+.++....+.... + .....++++++.+++.+...... +
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~~-~ 141 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK-K--------------------------------KLDEIVEKSLKGAALWDEVKDRL-K 141 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH-H--------------------------------HHHHHHHHHHHHcCCchhhHHHH-h
Confidence 7 8999999886433211000 0 01123455667777642111111 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
..+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +++|+.++|+..++.+++|++++|
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~v~~l 218 (250)
T PRK14240 142 KSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK---DYTIVIVTHNMQQASRISDKTAFF 218 (250)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEEeCHHHHHhhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998843 356677889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|+++..|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 219 LNGEIVEFGDTVDLF 233 (250)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999887763
No 464
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=316.77 Aligned_cols=218 Identities=22% Similarity=0.268 Sum_probs=170.5
Q ss_pred eeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCc---eEEEEEEECC
Q 000562 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISG 892 (1419)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 892 (1419)
.+.++|+++.. +++.+|+|+|+++++||+++|+|+||||||||+++|+|..... +.+|+|.++|
T Consensus 20 ~l~~~nl~~~~-------------~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 86 (274)
T PRK14265 20 VFEVEGVKVFY-------------GGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRD 86 (274)
T ss_pred eEEEeeEEEEe-------------CCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECC
Confidence 45666665543 2346999999999999999999999999999999999975311 2479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCC
Q 000562 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 967 (1419)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~ 967 (1419)
.+... ..+++.++|++|++.+++. |+.|++.+....+. .. ...++.+++.++.+++......... ..+.
T Consensus 87 ~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 160 (274)
T PRK14265 87 RNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLK-EKGT 160 (274)
T ss_pred EecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhc-CCcc
Confidence 87532 2345679999999887764 99999987643321 11 1123445677888776421111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEe----
Q 000562 968 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK---- 1043 (1419)
Q Consensus 968 ~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~---- 1043 (1419)
.||||||||++|||+|+.+|++|||||||+|||+.+...+.+.|+++++ ++|||+++|+++ .+.+.+|++++|+
T Consensus 161 ~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~~~~ 238 (274)
T PRK14265 161 ALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFNTEID 238 (274)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999865 799999999986 5778899999997
Q ss_pred ----cCCEEEEeCCC
Q 000562 1044 ----RGGELIYAGPL 1054 (1419)
Q Consensus 1044 ----~gG~~~~~G~~ 1054 (1419)
+.|++++.|+.
T Consensus 239 ~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 239 EYGKRRGKLVEFSPT 253 (274)
T ss_pred cccccCceEEEeCCH
Confidence 25899999986
No 465
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-32 Score=314.12 Aligned_cols=211 Identities=23% Similarity=0.305 Sum_probs=169.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCCCC----CCceEEEEccCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~ 221 (1419)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|. .+.+|+|.++|+++.+.. .++.++|++|++.++
T Consensus 34 ~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~ 113 (276)
T PRK14271 34 KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPF 113 (276)
T ss_pred EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccC
Confidence 36999999999999999999999999999999999998751 135899999998875431 246799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+ .||+||+.++...... .. .. +....++.+++.+||.+..++.. +
T Consensus 114 ~-~tv~eni~~~~~~~~~---~~----------------~~--------------~~~~~~~~~l~~~~l~~~~~~~l-~ 158 (276)
T PRK14271 114 P-MSIMDNVLAGVRAHKL---VP----------------RK--------------EFRGVAQARLTEVGLWDAVKDRL-S 158 (276)
T ss_pred C-ccHHHHHHHHHHhccC---CC----------------HH--------------HHHHHHHHHHHHcCCCchhhhHh-h
Confidence 7 8999999875432100 00 00 01123456778888865332222 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
..++.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|++++|+..++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l 235 (276)
T PRK14271 159 DSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALF 235 (276)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998864 3 56777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|++++.|+++++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 236 FDGRLVEEGPTEQLF 250 (276)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988774
No 466
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=3.7e-33 Score=311.31 Aligned_cols=195 Identities=27% Similarity=0.425 Sum_probs=159.4
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCcc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
+.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 17 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 93 (220)
T cd03245 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFY-GT 93 (220)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhHHCCHHHHHhhEEEeCCCCcccc-ch
Confidence 469999999999999999999999999999999999865 458999999986532 234567999999988776 69
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCccc------CCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIG------LPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g------~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
++|++.+... ... .+.++++++.+++.+..+.... ......||||||||++||++|+.+|++|+|
T Consensus 94 v~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llll 164 (220)
T cd03245 94 LRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLL 164 (220)
T ss_pred HHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999976421 111 1235677888888776654321 112458999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G 1052 (1419)
||||+|||+.++..+.+.|++++++ +|||+++|+++ ..+.+|++++|.+ |++++.|
T Consensus 165 DEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~--~~~~~d~v~~l~~-g~i~~~~ 220 (220)
T cd03245 165 DEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS--LLDLVDRIIVMDS-GRIVADG 220 (220)
T ss_pred eCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH--HHHhCCEEEEEeC-CeEeecC
Confidence 9999999999999999999998764 89999999976 3478999999986 7887654
No 467
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=315.68 Aligned_cols=205 Identities=21% Similarity=0.256 Sum_probs=163.5
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC--c-eEEEEEEECCccCC-----cccccceEEEEccCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGYPKR-----QETFARISGYCEQNDIH 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g~~~~-----~~~~~~~~gyv~Q~d~~ 913 (1419)
..+|+|+|++|++||++||+|+||||||||+++|+|.... . +.+|+|.++|.++. ...+++.++|++|++.+
T Consensus 23 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 102 (264)
T PRK14243 23 FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPVEVRRRIGMVFQKPNP 102 (264)
T ss_pred EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChHHHhhhEEEEccCCcc
Confidence 4699999999999999999999999999999999997431 1 25799999998753 12345679999999887
Q ss_pred CCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceee
Q 000562 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLD 993 (1419)
++ .|++||+.+....+. .. ...++.++++++.+++.+..+... ...+..||||||||++|||+|+.+|++|+||
T Consensus 103 ~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~~LSgGq~qrv~laral~~~p~lllLD 176 (264)
T PRK14243 103 FP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKL-KQSGLSLSGGQQQRLCIARAIAVQPEVILMD 176 (264)
T ss_pred cc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHh-cCCcccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 77 499999988654321 11 122345667778777743111111 1124579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEec--------CCEEEEeCCC
Q 000562 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR--------GGELIYAGPL 1054 (1419)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~--------gG~~~~~G~~ 1054 (1419)
|||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++ .|+++..|+.
T Consensus 177 EPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 177 EPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELTEGGGRYGYLVEFDRT 243 (264)
T ss_pred CCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccccccccCceEEEeCCH
Confidence 99999999999999999999975 589999999986 57889999999972 4799999875
No 468
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.9e-32 Score=312.75 Aligned_cols=206 Identities=25% Similarity=0.336 Sum_probs=167.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCcc-----CCCCCC-------CceEEEEcc
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHG-----FKEFVP-------PRTSAYVSQ 216 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~-----~~~~~~-------~~~~~yv~Q 216 (1419)
++|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|.+ +..... ++.++|++|
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 20 KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 5999999999999999999999999999999999998775 9999999987 544321 346999999
Q ss_pred CCC--CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcc-
Q 000562 217 QDW--QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT- 293 (1419)
Q Consensus 217 ~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 293 (1419)
++. +.+.+|+.||+.+........ .. + +....++++++.+|+..
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~------------------~--------------~~~~~~~~~l~~~~l~~~ 143 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVGAR-HY------------------G--------------DIRATAGDWLERVEIDAA 143 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhccC-cH------------------H--------------HHHHHHHHHHHHcCCChh
Confidence 973 567789999997632211000 00 0 01223567888999964
Q ss_pred cccccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHh
Q 000562 294 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 373 (1419)
Q Consensus 294 ~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~ 373 (1419)
..++.+ ..|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++.+. .+.+|+.++|+..++.+
T Consensus 144 ~~~~~~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~isH~~~~~~~ 217 (258)
T PRK11701 144 RIDDLP-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRE-LGLAVVIVTHDLAVARL 217 (258)
T ss_pred HHhCCC-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHH
Confidence 445444 469999999999999999999999999999999999999999999988653 25677779999999999
Q ss_pred hcCeEEEEcCCeEEEEcChhhHH
Q 000562 374 LFDDVILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 374 ~~D~vilL~~G~iv~~G~~~~~~ 396 (1419)
.+|+|++|++|++++.|+++++.
T Consensus 218 ~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 218 LAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred hcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999987763
No 469
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.5e-33 Score=355.48 Aligned_cols=211 Identities=27% Similarity=0.435 Sum_probs=174.7
Q ss_pred ceeEeccceeeeecccccccccccccceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCcc
Q 000562 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 894 (1419)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 894 (1419)
..+.|+|+++..+. ++++|+|+|++++|||++||+||||||||||+++|.|... +.+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCEe
Confidence 45788888877642 4679999999999999999999999999999999999876 468999999988
Q ss_pred CCc---ccccceEEEEccCCCCCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCC-------ccccCCcccCC
Q 000562 895 KRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVEL-------TSLSGALIGLP 964 (1419)
Q Consensus 895 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l-------~~~~~~~~g~~ 964 (1419)
+++ ..+++.++||+|++.++. -|++||+.++. .+.+++ .++++++..++ .+-.|+.+|..
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~e----ei~~a~k~a~~~d~I~~lp~g~dt~vge~ 462 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATDE----EIEEALKLANAHEFIANLPDGYDTIVGER 462 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCHH----HHHHHHHHhChHHHHHhCcccccceecCC
Confidence 654 567889999999998887 79999999862 112222 23444443332 23467888844
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEec
Q 000562 965 GINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 1044 (1419)
Q Consensus 965 ~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1044 (1419)
...||||||||++||||++++|+||+||||||+||+.+...|++.++++. +++|+++++|+++ ....+|+|++|++
T Consensus 463 -G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~ 538 (567)
T COG1132 463 -GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN 538 (567)
T ss_pred -CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999877 5789999999986 4566999999986
Q ss_pred CCEEEEeCCC
Q 000562 1045 GGELIYAGPL 1054 (1419)
Q Consensus 1045 gG~~~~~G~~ 1054 (1419)
|+++..|+.
T Consensus 539 -G~i~e~G~h 547 (567)
T COG1132 539 -GRIVERGTH 547 (567)
T ss_pred -CEEEEecCH
Confidence 789999985
No 470
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.4e-32 Score=312.46 Aligned_cols=208 Identities=24% Similarity=0.307 Sum_probs=162.7
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcc---c-ccceEEEEccCCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSPG 916 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~d~~~~~ 916 (1419)
++.+|+|+|++|++||+++|+|+||||||||+++|+|.....+.+|+|.++|.+.... . .++.++|++|++.+++.
T Consensus 13 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (248)
T PRK09580 13 DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGIFMAFQYPVEIPG 92 (248)
T ss_pred CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcceEEEecCchhccc
Confidence 3569999999999999999999999999999999999842114689999999875321 1 23468999999888888
Q ss_pred ccHHHHHHHHhh-hcC--CCC-CcHHHHHHHHHHHHHHcCCc-cccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 000562 917 LTVLESLLFSAW-LRL--PSE-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1419)
Q Consensus 917 lTv~E~l~f~a~-lr~--~~~-~~~~~~~~~v~~vl~~l~l~-~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ill 991 (1419)
+|+.+++.+... ++. ... .......+.+++.++.+++. +..+..+ .+.||||||||++|||+|+.+|+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~~LS~G~~qrv~laral~~~p~ill 168 (248)
T PRK09580 93 VSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NVGFSGGEKKRNDILQMAVLEPELCI 168 (248)
T ss_pred hhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 887776653211 110 000 11122345678888988884 3444332 13699999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHh-cCeEEEEecCCEEEEeCCC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||||+|||+.++..+.+.|+++++.|+|||+++|+++. +... +|++++|++ |++++.|+.
T Consensus 169 LDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 230 (248)
T PRK09580 169 LDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRI-LDYIKPDYVHVLYQ-GRIVKSGDF 230 (248)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-HHhhhCCEEEEEEC-CeEEEeCCH
Confidence 999999999999999999999998778999999999763 4444 799999985 799999875
No 471
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=6.6e-33 Score=303.80 Aligned_cols=185 Identities=25% Similarity=0.296 Sum_probs=155.1
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc--ccccceEEEEccCCCCCCCc
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~l 917 (1419)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+
T Consensus 11 ~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 88 (198)
T TIGR01189 11 GERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPEL 88 (198)
T ss_pred CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEcccchHHhhhheEEeccCcccccCC
Confidence 34579999999999999999999999999999999999865 468999999987532 23456789999998888889
Q ss_pred cHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCC
Q 000562 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1419)
Q Consensus 918 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTs 997 (1419)
|+.|++.+....+.. + ++.++++++.+++.+..+..+ ..||||||||++||++++.+|++++|||||+
T Consensus 89 tv~~~l~~~~~~~~~-----~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~ 156 (198)
T TIGR01189 89 SALENLHFWAAIHGG-----A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQRRLALARLWLSRAPLWILDEPTT 156 (198)
T ss_pred cHHHHHHHHHHHcCC-----c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 999999876543311 1 234678999999987766654 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEE
Q 000562 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLF 1041 (1419)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~ 1041 (1419)
|||+.+...+++.|++++++|.|||+++|++.. + .+++++.
T Consensus 157 ~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~-~--~~~~~~~ 197 (198)
T TIGR01189 157 ALDKAGVALLAGLLRAHLARGGIVLLTTHQDLG-L--VEARELR 197 (198)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEEccccc-c--cceEEee
Confidence 999999999999999998789999999999752 2 3466543
No 472
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-32 Score=304.82 Aligned_cols=192 Identities=27% Similarity=0.411 Sum_probs=161.1
Q ss_pred cceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCC-------CCceEEEEccCCCCCCCCC
Q 000562 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 225 (1419)
|+|+++++ |+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++++|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999775 999999998764211 2457999999998888999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
++||+.+..... . . . .....++.+++.+||++..++.+ +
T Consensus 92 ~~~~l~~~~~~~---~--~------~-------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (214)
T cd03297 92 VRENLAFGLKRK---R--N------R-------------------------EDRISVDELLDLLGLDHLLNRYP-----A 130 (214)
T ss_pred HHHHHHHHHhhC---C--H------H-------------------------HHHHHHHHHHHHcCCHhHhhcCc-----c
Confidence 999998753210 0 0 0 00123567888999987666544 4
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
.||||||||++||+|++.+|++++|||||+|||+.++..+.+.+++++... +++|+.++|+..++.+++|++++|++|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 131 QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNL-NIPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 699999999999999999999999999999999999999999999987532 4567778899999999999999999999
Q ss_pred EEEEc
Q 000562 386 IVYQG 390 (1419)
Q Consensus 386 iv~~G 390 (1419)
++.+|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98775
No 473
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-32 Score=310.45 Aligned_cols=194 Identities=21% Similarity=0.287 Sum_probs=164.2
Q ss_pred cceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccH
Q 000562 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1419)
Q Consensus 840 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv 919 (1419)
..+.+|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.++|. ++++.|+..+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCE----------EeEEecccCCCCCCcH
Confidence 45679999999999999999999999999999999999876 46899999985 3567777767778999
Q ss_pred HHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCC
Q 000562 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1419)
Q Consensus 920 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgL 999 (1419)
+|++.+...... ...++..+.++++++.+++.+..+.. ++.||+|||||++||++|+.+|+||+|||||+||
T Consensus 103 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCMG---FKRKEIKAMTPKIIEFSELGEFIYQP-----VKKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----cccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 999987644321 22333445567888888888766654 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
|+.+...+.+.|+++++.|+|||+++|++. ++.+.+|++++|.+ |+++..|+..
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~i~~~g~~~ 228 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GKLKDYGELD 228 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CEEEEeCCHH
Confidence 999999999999999877999999999975 46678999999985 7999988853
No 474
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-32 Score=311.36 Aligned_cols=210 Identities=24% Similarity=0.353 Sum_probs=167.0
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
++|+|+|+++++||+++|+|||||||||||++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 17 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14262 17 KAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTPF 96 (250)
T ss_pred eeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCccC
Confidence 5899999999999999999999999999999999998641 13589999999887532 1246799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+ .||+||+.++....+... + + ..+..+++.++.+|+....+.. .+
T Consensus 97 ~-~tv~e~l~~~~~~~~~~~--~---~----------------------------~~~~~~~~~l~~~~l~~~~~~~-~~ 141 (250)
T PRK14262 97 P-MSIYDNVAFGPRIHGVKS--K---H----------------------------KLDRIVEESLKKAALWDEVKSE-LN 141 (250)
T ss_pred c-ccHHHHHHHHHHHcCCCc--H---H----------------------------HHHHHHHHHHHHcCCCchhHHH-Hh
Confidence 6 899999987643221100 0 0 0112345667777775321111 13
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
...+.||||||||++||+|++.+|++++|||||+|||..++..+.+.|+++++ + ++++.++|+..++.+++|++++|
T Consensus 142 ~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tili~sH~~~~~~~~~d~i~~l 218 (250)
T PRK14262 142 KPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--N-YTIVIVTHNIGQAIRIADYIAFM 218 (250)
T ss_pred CChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--C-cEEEEEeCCHHHHHHhCCEEEEE
Confidence 44567999999999999999999999999999999999999999999998853 3 56777889988999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|+++..|+.+++.
T Consensus 219 ~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 219 YRGELIEYGPTREIV 233 (250)
T ss_pred ECCEEEEecCHHHHH
Confidence 999999999988764
No 475
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-32 Score=311.21 Aligned_cols=208 Identities=24% Similarity=0.302 Sum_probs=165.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCC--CeeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1419)
+++|+|+|+.|++|++++|+||||||||||+++|+|.+.|.. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 369999999999999999999999999999999999986531 1489999999887531 124579999999998
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc----cccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCAD 296 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 296 (1419)
++.+|+.||+.++....+... .+ +....++..++.+++. +..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRD-RD--------------------------------HLMEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCC-HH--------------------------------HHHHHHHHHHHHcCcchhhhhhhc
Confidence 999999999987543211100 00 0011233445555543 2334
Q ss_pred ccccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcC
Q 000562 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1419)
Q Consensus 297 t~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 376 (1419)
+. ++.||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++++ + ++++.++|+..++.+.+|
T Consensus 144 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d 215 (252)
T PRK14272 144 TP-----ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--V-TTIIIVTHNMHQAARVSD 215 (252)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCC
Confidence 43 456999999999999999999999999999999999999999999998853 3 667778899999999999
Q ss_pred eEEEEcCCeEEEEcChhhHH
Q 000562 377 DVILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 377 ~vilL~~G~iv~~G~~~~~~ 396 (1419)
+|++|++|++++.|+++++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 476
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-32 Score=308.33 Aligned_cols=210 Identities=20% Similarity=0.262 Sum_probs=163.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcC--CCCCeeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1419)
+++|+|+|+++++||+++|+|||||||||||++|+|..+ +..+.+|+|.++|.++... ..++.++|++|++.+
T Consensus 18 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (252)
T PRK14255 18 FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPNP 97 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCcc
Confidence 359999999999999999999999999999999999864 3222489999999877431 124679999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1419)
++ .||+||+.+.....+... .+ . ....+...++.+|+........
T Consensus 98 ~~-~tv~~nl~~~~~~~~~~~-~~----~----------------------------~~~~~~~~l~~~~l~~~i~~~~- 142 (252)
T PRK14255 98 FP-FSIYENVIYGLRLAGVKD-KA----V----------------------------LDEAVETSLKQAAIWDEVKDHL- 142 (252)
T ss_pred CC-CcHHHHHHHHHHHcCCCC-HH----H----------------------------HHHHHHHHHHHcCCccchhhHH-
Confidence 77 799999987643321110 00 0 0112344555666532111111
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 380 (1419)
+..+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.. + ++++.++|+..++.+.+|+|++
T Consensus 143 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~ 219 (252)
T PRK14255 143 HESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQASRISDKTAF 219 (252)
T ss_pred hcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHHHhCCEEEE
Confidence 233456999999999999999999999999999999999999999999998854 3 5677788999999999999999
Q ss_pred EcCCeEEEEcChhhH
Q 000562 381 LSEGQIVYQGPRVSV 395 (1419)
Q Consensus 381 L~~G~iv~~G~~~~~ 395 (1419)
|++|+++..|+..++
T Consensus 220 l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 220 FLTGNLIEFADTKQM 234 (252)
T ss_pred EECCEEEEeCCHHHH
Confidence 999999999988776
No 477
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-32 Score=312.60 Aligned_cols=207 Identities=25% Similarity=0.314 Sum_probs=166.4
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC---ceEEEEEEECCccCCc-----ccccceEEEEccCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~ 912 (1419)
++.+|+|+|+++++||+++|+|+||||||||+++|+|.... .+.+|+|.+||.++.. ...++.++|++|++.
T Consensus 15 ~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 94 (250)
T PRK14266 15 DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVELRKKVGMVFQKPN 94 (250)
T ss_pred CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHHHhhheEEEecCCc
Confidence 35699999999999999999999999999999999996431 1258999999987532 234567999999988
Q ss_pred CCCCccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 913 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
+++. |++||+.+...... ....+...+.+.+.++.+++.+....... .....||+|||||++||++|+.+|++++|
T Consensus 95 ~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~Gq~qrv~laral~~~p~llll 170 (250)
T PRK14266 95 PFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLD-KSALGLSGGQQQRLCIARTIAVSPEVILM 170 (250)
T ss_pred cCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 8875 99999987643221 11223334567888888888542111111 22457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 171 DEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~i~~~g~~ 229 (250)
T PRK14266 171 DEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GEIIESGLT 229 (250)
T ss_pred cCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-CeEEEeCCH
Confidence 999999999999999999999864 899999999986 57788999999985 799999875
No 478
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.8e-32 Score=310.67 Aligned_cols=200 Identities=27% Similarity=0.400 Sum_probs=167.3
Q ss_pred eeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCCH
Q 000562 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMTV 226 (1419)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV 226 (1419)
+|+|+|+++++|++++|+||||||||||+++|+|.++ . +|+|.++|+++..... ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 7999999999999999999999999999999999873 2 8999999998765432 2468999999888888999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCCC
Q 000562 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1419)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 306 (1419)
+||+.+..... . .. .+....++++++.+||.+..++.+ +.
T Consensus 87 ~~nl~~~~~~~-~-~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (248)
T PRK03695 87 FQYLTLHQPDK-T-RT---------------------------------EAVASALNEVAEALGLDDKLGRSV-----NQ 126 (248)
T ss_pred HHHHHhcCccC-C-Cc---------------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----cc
Confidence 99998753210 0 00 001224677889999987666655 46
Q ss_pred CChHHhHHHHHHHHHhC-------CCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 000562 307 ISGGQKKRLTTGELLVG-------PARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1419)
Q Consensus 307 LSGGqkkRvsia~al~~-------~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 379 (1419)
||||||||++||+||+. +|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.+++|+++
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~--~~tvi~~sH~~~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQ--GIAVVMSSHDLNHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhC--CCEEEEEecCHHHHHHhCCEEE
Confidence 99999999999999997 67999999999999999999999999998642 5667778899999999999999
Q ss_pred EEcCCeEEEEcChhhH
Q 000562 380 LLSEGQIVYQGPRVSV 395 (1419)
Q Consensus 380 lL~~G~iv~~G~~~~~ 395 (1419)
+|++|++++.|+.+++
T Consensus 205 ~l~~G~i~~~g~~~~~ 220 (248)
T PRK03695 205 LLKQGKLLASGRRDEV 220 (248)
T ss_pred EEECCEEEEECCHHHH
Confidence 9999999999987765
No 479
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-32 Score=311.14 Aligned_cols=210 Identities=23% Similarity=0.307 Sum_probs=166.2
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
.+|+|+|+++++||+++|+||||||||||+++|+|..++. .+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 99 (253)
T PRK14261 20 HALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNPF 99 (253)
T ss_pred eeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCccC
Confidence 5999999999999999999999999999999999987532 12489999999987543 1245799999999877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+ .||+||+.|+.+..+.... ......++.+++.++|.+...+.. +
T Consensus 100 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~-~ 144 (253)
T PRK14261 100 P-KSIYENVAYGPRIHGEKNK---------------------------------KTLDTIVEKSLKGAALWDEVKDRL-H 144 (253)
T ss_pred c-ccHHHHHHhhHHhcCCCCH---------------------------------HHHHHHHHHHHHHhcCchhhHHHh-h
Confidence 7 4999999986543211000 001123455677777743211111 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
...+.||||||||++|||+++.+|++++|||||+|||..++..+.+.|+++++ + .+|+.++|+..++.+.+|++++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d~v~~l 221 (253)
T PRK14261 145 DSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSDYTGFM 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998864 3 56777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|+++..|+.+++.
T Consensus 222 ~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 222 YLGKLIEFDKTTQIF 236 (253)
T ss_pred ECCEEEEcCCHHHHH
Confidence 999999999987763
No 480
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-32 Score=313.39 Aligned_cols=212 Identities=26% Similarity=0.366 Sum_probs=169.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCC-----CeeeEEEECCccCCCCCC---CceEEEEccCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL-----QVSGKITYNGHGFKEFVP---PRTSAYVSQQDW 219 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~-----~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~ 219 (1419)
+.+|+|+|++|++||+++|+|||||||||||++|+|.+++.. ..+|+|.++|.++..... ++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 359999999999999999999999999999999999987631 128999999998754332 346899999987
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccc
Q 000562 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1419)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 299 (1419)
.++.+||+||+.++...... ... ... .+....++.+++.+||++..++.+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~--~~~-------------~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~ 143 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHAR--RAG-------------ALT---------------HRDGEIAWQALALAGATALVGRDV 143 (272)
T ss_pred CCCCCcHHHHHhhccccccc--ccc-------------cCC---------------HHHHHHHHHHHHHcCcHhhhcCCc
Confidence 66779999999875321000 000 000 001223677889999987655544
Q ss_pred cCccCCCCChHHhHHHHHHHHHh---------CCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhH
Q 000562 300 GDEMLKGISGGQKKRLTTGELLV---------GPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 370 (1419)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~---------~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~ 370 (1419)
..|||||||||+|||+|+ .+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+..+
T Consensus 144 -----~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tviiisH~~~~ 217 (272)
T PRK13547 144 -----TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDW-NLGVLAIVHDPNL 217 (272)
T ss_pred -----ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHH
Confidence 469999999999999999 5999999999999999999999999999986532 4567778899999
Q ss_pred HHhhcCeEEEEcCCeEEEEcChhhH
Q 000562 371 AYELFDDVILLSEGQIVYQGPRVSV 395 (1419)
Q Consensus 371 ~~~~~D~vilL~~G~iv~~G~~~~~ 395 (1419)
+.+++|++++|++|++++.|+.+++
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~ 242 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADV 242 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHH
Confidence 9999999999999999999998776
No 481
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.5e-32 Score=310.18 Aligned_cols=206 Identities=25% Similarity=0.349 Sum_probs=158.4
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
+++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++ .
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~ 91 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPT---SGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-G 91 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCC---CCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-h
Confidence 46999999999999999999999999999999999998775 9999999987654322 356999999987665 6
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHh--CCcccccccccCc
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL--GLDTCADTLVGDE 302 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~ 302 (1419)
||+||+.+...... .+ +.... .+. ......++.+ |++...+ .
T Consensus 92 tv~e~l~~~~~~~~----~~---~~~~~---------------~~~---------~~~~~~~~~l~~~~~~~~~-----~ 135 (238)
T cd03249 92 TIAENIRYGKPDAT----DE---EVEEA---------------AKK---------ANIHDFIMSLPDGYDTLVG-----E 135 (238)
T ss_pred hHHHHhhccCCCCC----HH---HHHHH---------------HHH---------cChHHHHHhhccccceeec-----c
Confidence 99999987532110 00 00000 000 0012222333 3433333 3
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 000562 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1419)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 382 (1419)
..+.|||||||||+||++|+.+|++++|||||+|||+.++.++.+.|+++. . +++|+.++|+.+++. .+|++++|+
T Consensus 136 ~~~~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~--~-g~~vi~~sh~~~~~~-~~d~v~~l~ 211 (238)
T cd03249 136 RGSQLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM--K-GRTTIVIAHRLSTIR-NADLIAVLQ 211 (238)
T ss_pred CCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc--C-CCEEEEEeCCHHHHh-hCCEEEEEE
Confidence 345799999999999999999999999999999999999999999999874 2 455666788888885 899999999
Q ss_pred CCeEEEEcChhhHHH
Q 000562 383 EGQIVYQGPRVSVLD 397 (1419)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1419)
+|++++.|+.+++.+
T Consensus 212 ~G~i~~~~~~~~~~~ 226 (238)
T cd03249 212 NGQVVEQGTHDELMA 226 (238)
T ss_pred CCEEEEeCCHHHHhh
Confidence 999999998877654
No 482
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-32 Score=312.10 Aligned_cols=209 Identities=21% Similarity=0.259 Sum_probs=168.5
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCCC-----CCCceEEEEccCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1419)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|. .+.+|+|+++|+++... ..++.++|++|++.+
T Consensus 21 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 100 (261)
T PRK14263 21 FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPNP 100 (261)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCcc
Confidence 46999999999999999999999999999999999998752 12589999999987432 124679999999886
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccccc
Q 000562 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1419)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 300 (1419)
+ .+|+.||+.++....+.. . +....++.+++.+||.+..+...+
T Consensus 101 ~-~~tv~enl~~~~~~~~~~---~--------------------------------~~~~~~~~~l~~~~l~~~i~~~~~ 144 (261)
T PRK14263 101 F-SMSIFDNVAFGLRLNRYK---G--------------------------------DLGDRVKHALQGAALWDEVKDKLK 144 (261)
T ss_pred c-cccHHHHHHHHHhhcCch---H--------------------------------HHHHHHHHHHHHcCCchhhhhhhh
Confidence 6 699999998864322100 0 001235667788887543322222
Q ss_pred CccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 000562 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1419)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 380 (1419)
...+.||||||||++|||||+.+|++++|||||+|||+.++.++.+.|+++.+ +++++.++|+..++.+++|+|++
T Consensus 145 -~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~---~~tii~isH~~~~i~~~~d~v~~ 220 (261)
T PRK14263 145 -VSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKK---DYTIALVTHNMQQAIRVADTTAF 220 (261)
T ss_pred -CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCCEEEE
Confidence 34567999999999999999999999999999999999999999999998852 35677788999999999999999
Q ss_pred Ec--------CCeEEEEcChhhHH
Q 000562 381 LS--------EGQIVYQGPRVSVL 396 (1419)
Q Consensus 381 L~--------~G~iv~~G~~~~~~ 396 (1419)
|+ +|++++.|+.+++.
T Consensus 221 l~~~~~~~~~~G~i~~~g~~~~~~ 244 (261)
T PRK14263 221 FSVDISQGTRTGYLVEMGPTAQIF 244 (261)
T ss_pred EecccccccCCceEEEeCCHHHHH
Confidence 95 89999999988764
No 483
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1e-32 Score=351.38 Aligned_cols=208 Identities=24% Similarity=0.359 Sum_probs=164.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
.++|+|+|+.+++||.++|+|+||||||||+++|+|.++|. +|+|.+||.++++... ++.++||+|++.+| +.
T Consensus 345 ~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf-~~ 420 (571)
T TIGR02203 345 RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPD---SGQILLDGHDLADYTLASLRRQVALVSQDVVLF-ND 420 (571)
T ss_pred CccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCeEEECCEeHHhcCHHHHHhhceEEccCcccc-cc
Confidence 36999999999999999999999999999999999999886 8999999999876653 46799999999855 56
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccC
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 304 (1419)
|++|||.++..- ....+.+.++ ++.+. .++.++ .|++..||.||+. .
T Consensus 421 Ti~~Ni~~~~~~---~~~~~~i~~~------------------l~~~~---------l~~~i~--~lp~gldt~i~~~-g 467 (571)
T TIGR02203 421 TIANNIAYGRTE---QADRAEIERA------------------LAAAY---------AQDFVD--KLPLGLDTPIGEN-G 467 (571)
T ss_pred cHHHHHhcCCCC---CCCHHHHHHH------------------HHHcC---------hHHHHH--hCcCcccceecCC-C
Confidence 999999875310 0000111111 11000 111111 3566789999976 5
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000562 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1419)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 384 (1419)
++||||||||++||||++.+|++++||||||+||..++..|.+.|++..+ ++| ++.++|+. ...+.||+|++|++|
T Consensus 468 ~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~--~~t-iIiitH~~-~~~~~~D~ii~l~~g 543 (571)
T TIGR02203 468 VLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQ--GRT-TLVIAHRL-STIEKADRIVVMDDG 543 (571)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhC--CCE-EEEEehhh-HHHHhCCEEEEEeCC
Confidence 68999999999999999999999999999999999999999999998743 344 44466665 557889999999999
Q ss_pred eEEEEcChhhHH
Q 000562 385 QIVYQGPRVSVL 396 (1419)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1419)
+++..|+.+++.
T Consensus 544 ~i~~~g~~~~l~ 555 (571)
T TIGR02203 544 RIVERGTHNELL 555 (571)
T ss_pred EEEeeCCHHHHH
Confidence 999999999875
No 484
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-33 Score=298.83 Aligned_cols=160 Identities=30% Similarity=0.447 Sum_probs=142.9
Q ss_pred ceeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc-----ccccceEEEEccCCCCCC
Q 000562 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIHSP 915 (1419)
Q Consensus 841 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~~~ 915 (1419)
++.+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++..++
T Consensus 12 ~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (178)
T cd03229 12 QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALFP 89 (178)
T ss_pred CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccchhHHHHhhcEEEEecCCccCC
Confidence 3569999999999999999999999999999999999866 468999999987532 234578999999998888
Q ss_pred CccHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCC
Q 000562 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1419)
Q Consensus 916 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEP 995 (1419)
.+|++|++.+. ||||||||++||++|+.+|++++||||
T Consensus 90 ~~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~~p~llilDEP 127 (178)
T cd03229 90 HLTVLENIALG------------------------------------------LSGGQQQRVALARALAMDPDVLLLDEP 127 (178)
T ss_pred CCCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 89999988531 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCCHHHHHhcCeEEEEecC
Q 000562 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1419)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1045 (1419)
|+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++|
T Consensus 128 ~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 128 TSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 9999999999999999999877 899999999975 466689999999863
No 485
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=7.2e-33 Score=316.25 Aligned_cols=196 Identities=21% Similarity=0.302 Sum_probs=162.6
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCcc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
..+|+|||++|++||+++|+|+||||||||+++|+|... .+|+|.++|.++.. ...++.++||+|++.+++. |
T Consensus 17 ~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~~-t 92 (275)
T cd03289 17 NAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFSG-T 92 (275)
T ss_pred CcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEhhhCCHHHHhhhEEEECCCcccchh-h
Confidence 458999999999999999999999999999999999875 37999999987642 3456789999999998874 9
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccC------CCCCCCCHHHHHHHHHHHHHhhCCCccee
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGL------PGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~------~~~~~lSgGqrqrl~iA~~L~~~p~illL 992 (1419)
++||+.... + .. ++.+++.++.++|.+..+...+. ++...||+|||||++|||+|+.+|+||+|
T Consensus 93 v~~nl~~~~----~--~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~illl 162 (275)
T cd03289 93 FRKNLDPYG----K--WS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLL 162 (275)
T ss_pred HHHHhhhcc----C--CC----HHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999995321 0 11 23467788889987665544321 12356999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
||||+|||+.+...+++.|+++. .++|||+++|+++ ....+|++++|++ |++++.|++.
T Consensus 163 DEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~--~i~~~dri~vl~~-G~i~~~g~~~ 221 (275)
T cd03289 163 DEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE--AMLECQRFLVIEE-NKVRQYDSIQ 221 (275)
T ss_pred ECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH--HHHhCCEEEEecC-CeEeecCCHH
Confidence 99999999999999999999875 4899999999975 3456999999985 7999999863
No 486
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-32 Score=327.02 Aligned_cols=192 Identities=20% Similarity=0.308 Sum_probs=161.3
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCCCCccHHH
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 921 (1419)
+.+|+|+|+++++|+++||+|||||||||||++|+|..+ +.+|+|.++|.+. ++.+...+.+.+|++|
T Consensus 37 ~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~--P~sGeI~I~G~~~----------~i~~~~~l~~~lTV~E 104 (549)
T PRK13545 37 HYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTM--PNKGTVDIKGSAA----------LIAISSGLNGQLTGIE 104 (549)
T ss_pred ceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCceEEEECCEee----------eEEeccccCCCCcHHH
Confidence 469999999999999999999999999999999999876 4689999999641 1222344567789999
Q ss_pred HHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCH
Q 000562 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1419)
Q Consensus 922 ~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~ 1001 (1419)
++.+....+. ...++..+.++++++.+++.+..+..+ +.||||||||++|||+|+.+|++|+|||||+|||+
T Consensus 105 nL~l~~~~~~---~~~~e~~e~i~elLe~lgL~~~ld~~~-----~~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~ 176 (549)
T PRK13545 105 NIELKGLMMG---LTKEKIKEIIPEIIEFADIGKFIYQPV-----KTYSSGMKSRLGFAISVHINPDILVIDEALSVGDQ 176 (549)
T ss_pred HHHhhhhhcC---CCHHHHHHHHHHHHHHcCChhHhhCCc-----ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCH
Confidence 9987554321 223334456788999999987776653 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 1002 RAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 1002 ~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|+..
T Consensus 177 ~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~~-GkIv~~G~~~ 228 (549)
T PRK13545 177 TFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLHY-GQVKEYGDIK 228 (549)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 9999999999999878999999999986 56778999999985 7999999864
No 487
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=3.9e-32 Score=296.24 Aligned_cols=170 Identities=39% Similarity=0.660 Sum_probs=147.7
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCc--CCCCCeeeEEEECCccCCCCCCCceEEEEccCCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL--GHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l--~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 225 (1419)
.++|+|+|+++++|++++|+||||||||||+++|+|.+ ++. +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 46999999999999999999999999999999999998 665 9999999998765334577999999998889999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
++||+.+..++ .
T Consensus 99 ~~~~i~~~~~~--------------------------------------------------------------------~ 110 (194)
T cd03213 99 VRETLMFAAKL--------------------------------------------------------------------R 110 (194)
T ss_pred HHHHHHHHHHh--------------------------------------------------------------------c
Confidence 99999753110 0
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChh-HHHhhcCeEEEEcCC
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP-EAYELFDDVILLSEG 384 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~-~~~~~~D~vilL~~G 384 (1419)
.||||||||++|||||+.+|++++|||||+|||..++..+.+.|+++... +++++.++|+.+ ++.+.+|++++|++|
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~--~~tiii~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADT--GRTIICSIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCchHHHHHhcCEEEEEeCC
Confidence 49999999999999999999999999999999999999999999988653 445555666664 788999999999999
Q ss_pred eEEEEc
Q 000562 385 QIVYQG 390 (1419)
Q Consensus 385 ~iv~~G 390 (1419)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998765
No 488
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-32 Score=310.28 Aligned_cols=210 Identities=23% Similarity=0.322 Sum_probs=165.7
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcC--CCCCeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
++|+|+|+.|++||+++|+||||||||||+++|+|.++ |..+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14251 18 EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTPF 97 (251)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCccC
Confidence 59999999999999999999999999999999999986 2213589999999886431 1245799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+ .||+||+.++....+.... + .....++.+++.+||........ +
T Consensus 98 ~-~tv~enl~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 142 (251)
T PRK14251 98 P-FSVYDNVAYGLKIAGVKDK-----E----------------------------LIDQRVEESLKQAAIWKETKDNL-D 142 (251)
T ss_pred C-CcHHHHHHHHHHHcCCCCH-----H----------------------------HHHHHHHHHHHHcCCCcchHHHh-c
Confidence 5 7999999875432211000 0 00123456777788842110001 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
...+.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +++|+.++|+..++.+++|+|++|
T Consensus 143 ~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiiiisH~~~~~~~~~d~i~~l 219 (251)
T PRK14251 143 RNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH---QYTFIMVTHNLQQAGRISDQTAFL 219 (251)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc---CCeEEEEECCHHHHHhhcCEEEEE
Confidence 34457999999999999999999999999999999999999999999998853 356777889999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|+++..|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 220 MNGDLIEAGPTEEMF 234 (251)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 489
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-32 Score=308.93 Aligned_cols=210 Identities=20% Similarity=0.256 Sum_probs=166.1
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
.+|+|+|++|++|++++|+||||||||||+++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 97 (251)
T PRK14249 18 QVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPNPF 97 (251)
T ss_pred eEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCccC
Confidence 5999999999999999999999999999999999998764 12369999999876432 1246799999999878
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+. ||+||+.++....+... + + +....++.+++.+||.+...... +
T Consensus 98 ~~-tv~enl~~~~~~~~~~~--~---~----------------------------~~~~~~~~~l~~~~l~~~l~~~~-~ 142 (251)
T PRK14249 98 PK-SIFDNVAFGPRMLGTTA--Q---S----------------------------RLDEVVEKSLRQAALWDEVKDNL-H 142 (251)
T ss_pred cC-cHHHHHhhHHHhcCCCh--h---h----------------------------HHHHHHHHHHHHhCCchhhhhHh-h
Confidence 75 99999988654321100 0 0 00112345566666643211111 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
.....|||||||||+|||||+.+|++++|||||+|||+.++.++.+.|+++. . +.+|+.++|+..++.+++|++++|
T Consensus 143 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~--~~tilivsh~~~~~~~~~d~i~~l 219 (251)
T PRK14249 143 KSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-Q--NYTIAIVTHNMQQAARASDWTGFL 219 (251)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c--CCEEEEEeCCHHHHHhhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999874 2 466777899999999999999999
Q ss_pred cCCeEEEEcChhhHH
Q 000562 382 SEGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1419)
++|++++.|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 220 LTGDLVEYGRTGEIF 234 (251)
T ss_pred eCCeEEEeCCHHHHH
Confidence 999999999988763
No 490
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=1.6e-32 Score=306.22 Aligned_cols=194 Identities=25% Similarity=0.357 Sum_probs=159.4
Q ss_pred eEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCcccccceEEEEccCCCCC--CCccHHHHHHHHh
Q 000562 850 GAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHS--PGLTVLESLLFSA 927 (1419)
Q Consensus 850 ~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~--~~lTv~E~l~f~a 927 (1419)
+++++||++||+|+||||||||+++|+|..+ +.+|+|.+||.+... .++.++|++|++.+. ..+|+.|++.+..
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 76 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIP--PAKGTVKVAGASPGK--GWRHIGYVPQRHEFAWDFPISVAHTVMSGR 76 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccchH--hhCcEEEecccccccCCCCccHHHHHHhcc
Confidence 4688999999999999999999999999866 468999999987532 356799999998654 3489999998753
Q ss_pred hhcC-CCCCcHHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHHhhCCCcceeeCCCCCCCHHHHHH
Q 000562 928 WLRL-PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAI 1006 (1419)
Q Consensus 928 ~lr~-~~~~~~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L~~~p~illLDEPTsgLD~~~~~~ 1006 (1419)
.... .........++.++++++.+++.+..+..+ ..||+|||||++||++|+.+|++++|||||+|||+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~~~ 151 (223)
T TIGR03771 77 TGHIGWLRRPCVADFAAVRDALRRVGLTELADRPV-----GELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQEL 151 (223)
T ss_pred ccccccccCCcHHHHHHHHHHHHHhCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 2110 000111223456788999999987766654 4799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCCC
Q 000562 1007 VMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1419)
Q Consensus 1007 i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1055 (1419)
+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|+..
T Consensus 152 l~~~l~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l-~-G~i~~~~~~~ 197 (223)
T TIGR03771 152 LTELFIELAGAGTAILMTTHDLA-QAMATCDRVVLL-N-GRVIADGTPQ 197 (223)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHH
Confidence 99999999877999999999976 577889999999 5 7999999864
No 491
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-32 Score=318.62 Aligned_cols=208 Identities=24% Similarity=0.320 Sum_probs=164.6
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCC---ceEEEEEEECCccCCc-----ccccceEEEEccCCCC
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH 913 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~~ 913 (1419)
+.+|+++|++|++||+++|+|+|||||||||++|+|.... .+.+|+|.++|.++.. ...++.++|++|++.+
T Consensus 58 ~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l 137 (305)
T PRK14264 58 DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVNLVELRKRVGMVFQSPNP 137 (305)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccccHHHHhhceEEEccCCcc
Confidence 5699999999999999999999999999999999997531 1458999999987532 2345679999999887
Q ss_pred CCCccHHHHHHHHhhhcCCC---------CCc-HHHHHHHHHHHHHHcCCccccCCcccCCCCCCCCHHHHHHHHHHHHH
Q 000562 914 SPGLTVLESLLFSAWLRLPS---------EIE-LETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVEL 983 (1419)
Q Consensus 914 ~~~lTv~E~l~f~a~lr~~~---------~~~-~~~~~~~v~~vl~~l~l~~~~~~~~g~~~~~~lSgGqrqrl~iA~~L 983 (1419)
++ .||+||+.+....+... ... ....++.++++++.+++.+....... ..+..||||||||++||++|
T Consensus 138 ~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LSgGq~qrv~LAraL 215 (305)
T PRK14264 138 FP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVNDRLD-DNALGLSGGQQQRLCIARCL 215 (305)
T ss_pred cc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhHHhc-CccccCCHHHHHHHHHHHHH
Confidence 77 59999999865322100 011 12234567888898887432211111 12468999999999999999
Q ss_pred hhCCCcceeeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEE-EEecCCEEEEeCCC
Q 000562 984 VANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELL-FMKRGGELIYAGPL 1054 (1419)
Q Consensus 984 ~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~-~l~~gG~~~~~G~~ 1054 (1419)
+.+|+||||||||+|||+.++..+.+.|+++++ +.|||+++|+++ .+.+.+|+++ +|+ .|+++..|+.
T Consensus 216 ~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d~i~~~l~-~G~i~~~g~~ 284 (305)
T PRK14264 216 AVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISDQTAVFLT-GGELVEYDDT 284 (305)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcCEEEEEec-CCEEEEeCCH
Confidence 999999999999999999999999999999876 589999999986 4677899975 566 4899999985
No 492
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-32 Score=311.51 Aligned_cols=206 Identities=22% Similarity=0.279 Sum_probs=165.7
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCC--eeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQ--VSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~--~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
++|+|+|+++++||+++|+|+|||||||||++|+|.+++..+ .+|+|.++|+++... ..++.++|++|++.++
T Consensus 21 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 100 (259)
T PRK14260 21 KAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNPF 100 (259)
T ss_pred EeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEecccccC
Confidence 599999999999999999999999999999999999875322 489999999887431 1235799999999877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc----ccccc
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCADT 297 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 297 (1419)
+ +||+||+.++....+... +. +....++.+++.+|+. +..+
T Consensus 101 ~-~tv~enl~~~~~~~~~~~-------------------~~--------------~~~~~~~~~l~~~~l~~~l~~~~~- 145 (259)
T PRK14260 101 P-MSIYENVAYGVRISAKLP-------------------QA--------------DLDEIVESALKGAALWQEVKDKLN- 145 (259)
T ss_pred C-ccHHHHHHHHHHHhcCCC-------------------HH--------------HHHHHHHHHHHHcCCcchhhhHhc-
Confidence 7 899999987643221000 00 0112345567777773 2233
Q ss_pred cccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000562 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1419)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 377 (1419)
.....|||||||||+|||||+.+|++++|||||+|||+.+..++.+.|++++. + .+|+.++|+.+++.+++|+
T Consensus 146 ----~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~i~~~~d~ 218 (259)
T PRK14260 146 ----KSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS--E-LTIAIVTHNMQQATRVSDF 218 (259)
T ss_pred ----CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCe
Confidence 34457999999999999999999999999999999999999999999998853 3 5677788999999999999
Q ss_pred EEEEc-----CCeEEEEcChhhHH
Q 000562 378 VILLS-----EGQIVYQGPRVSVL 396 (1419)
Q Consensus 378 vilL~-----~G~iv~~G~~~~~~ 396 (1419)
+++|+ +|+++++|+++++.
T Consensus 219 i~~l~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 219 TAFFSTDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred EEEEeccCCCCceEEEeCCHHHHh
Confidence 99998 59999999988763
No 493
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.2e-32 Score=356.98 Aligned_cols=207 Identities=25% Similarity=0.411 Sum_probs=165.8
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1419)
++|+|+|++++||+.++|+|+||||||||+++|+|.++|+ +|+|++||+++++... ++.++||+|++.+++ .|
T Consensus 471 ~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~---~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~-~t 546 (694)
T TIGR01846 471 EVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQ---HGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFS-RS 546 (694)
T ss_pred cccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEehhhCCHHHHHHhCeEEccCCeehh-hh
Confidence 5999999999999999999999999999999999999876 9999999999887654 477999999998665 69
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccCccCC
Q 000562 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1419)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 305 (1419)
++|||.++.. ....+.+.++++. . ..++.++ .|++..||.+|+. ..
T Consensus 547 i~eNi~~~~~----~~~~~~i~~a~~~------------------~---------~l~~~i~--~lp~gl~t~i~~~-g~ 592 (694)
T TIGR01846 547 IRDNIALCNP----GAPFEHVIHAAKL------------------A---------GAHDFIS--ELPQGYNTEVGEK-GA 592 (694)
T ss_pred HHHHHhcCCC----CCCHHHHHHHHHH------------------c---------ChHHHHH--hCcCccCcEecCC-CC
Confidence 9999987421 1111111111110 0 0112222 3567789999875 56
Q ss_pred CCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000562 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1419)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 385 (1419)
+||||||||++||||++.+|++++||||||+||+.++..+.+.|++..+ + .|++.++|..+.+ ..+|+|++|++|+
T Consensus 593 ~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~--~-~t~i~itH~~~~~-~~~d~ii~l~~G~ 668 (694)
T TIGR01846 593 NLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICR--G-RTVIIIAHRLSTV-RACDRIIVLEKGQ 668 (694)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhC--C-CEEEEEeCChHHH-HhCCEEEEEeCCE
Confidence 8999999999999999999999999999999999999999999998742 3 4555566766555 5699999999999
Q ss_pred EEEEcChhhHHH
Q 000562 386 IVYQGPRVSVLD 397 (1419)
Q Consensus 386 iv~~G~~~~~~~ 397 (1419)
++++|+++++.+
T Consensus 669 i~~~g~~~~l~~ 680 (694)
T TIGR01846 669 IAESGRHEELLA 680 (694)
T ss_pred EEEeCCHHHHHH
Confidence 999999998864
No 494
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-32 Score=310.01 Aligned_cols=210 Identities=22% Similarity=0.302 Sum_probs=165.3
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCC--CCeeeEEEECCccCCC-C---CCCceEEEEccCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKE-F---VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~-~---~~~~~~~yv~Q~d~~~ 221 (1419)
+++|+|+|+.+++||+++|+||||||||||+++|+|..++. .+.+|+|.++|.++.. . ..++.++|++|++.++
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 95 (249)
T PRK14253 16 NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNPF 95 (249)
T ss_pred eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCcC
Confidence 35999999999999999999999999999999999987642 1348999999987642 1 1245799999999877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+ .||+||+.++....+... + + .....++..++.+|+.+...... +
T Consensus 96 ~-~tv~~~l~~~~~~~~~~~--~---~----------------------------~~~~~~~~~~~~~~l~~~~~~~~-~ 140 (249)
T PRK14253 96 P-MSIYENVAYGLRAQGIKD--K---K----------------------------VLDEVVERSLRGAALWDEVKDRL-K 140 (249)
T ss_pred c-ccHHHHHHhHHHhcCCCc--h---H----------------------------HHHHHHHHHHHHcCCchhhhHHh-h
Confidence 6 899999987643211100 0 0 00122455666777643211111 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
.....|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+..++.+.+|++++|
T Consensus 141 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d~i~~l 217 (249)
T PRK14253 141 SHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISDRTAFF 217 (249)
T ss_pred cCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999999864 3 56777889999999999999999
Q ss_pred cCCeEEEEcChhhH
Q 000562 382 SEGQIVYQGPRVSV 395 (1419)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1419)
++|+++..|+.+++
T Consensus 218 ~~G~i~~~g~~~~~ 231 (249)
T PRK14253 218 LMGELVEHDDTQVI 231 (249)
T ss_pred ECCEEEEeCCHHHH
Confidence 99999999987765
No 495
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-32 Score=311.71 Aligned_cols=208 Identities=22% Similarity=0.274 Sum_probs=163.1
Q ss_pred eeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCC--CeeeEEEECCccCCCC-----CCCceEEEEccCCCCC
Q 000562 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1419)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1419)
++|+|+|+.+++||+++|+||||||||||+++|+|.+++.. +.+|+|.++|+++... ..++.++|++|++.++
T Consensus 34 ~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~~~~~~i~~v~q~~~l~ 113 (274)
T PRK14265 34 LALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSVKLRRQVGMVFQRPNPF 113 (274)
T ss_pred EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhHHHhhcEEEEccCCccc
Confidence 59999999999999999999999999999999999976321 2489999999887431 1246799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+ .||.||+.++....+.. . + .+..++..++.+||........ +
T Consensus 114 ~-~tv~~nl~~~~~~~~~~---~---~-----------------------------~~~~~~~~l~~~~l~~~l~~~~-~ 156 (274)
T PRK14265 114 P-KSIYENIAFAPRANGYK---G---N-----------------------------LDELVEDSLRRAAIWEEVKDKL-K 156 (274)
T ss_pred c-ccHHHHHHhHHHhcCch---H---H-----------------------------HHHHHHHHHHHcccchhhHHHh-c
Confidence 6 49999998754321100 0 0 0011334555666532111111 2
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
..+..|||||||||+|||||+.+|++++|||||+|||..++..+.+.|+++.+ +++|+.++|+.+++.+++|++++|
T Consensus 157 ~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~---~~tiii~sH~~~~~~~~~d~i~~l 233 (274)
T PRK14265 157 EKGTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE---QYTIIMVTHNMQQASRVADWTAFF 233 (274)
T ss_pred CCcccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998853 356777999999999999999999
Q ss_pred c---------CCeEEEEcChhhHH
Q 000562 382 S---------EGQIVYQGPRVSVL 396 (1419)
Q Consensus 382 ~---------~G~iv~~G~~~~~~ 396 (1419)
+ +|++++.|+.+++.
T Consensus 234 ~~~~~~~~~~~G~~~~~g~~~~~~ 257 (274)
T PRK14265 234 NTEIDEYGKRRGKLVEFSPTEQMF 257 (274)
T ss_pred ecccccccccCceEEEeCCHHHHH
Confidence 7 89999999998874
No 496
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=5e-32 Score=301.95 Aligned_cols=196 Identities=24% Similarity=0.378 Sum_probs=161.2
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC------CceEEEEccCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQV 221 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 221 (1419)
+++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|+++....+ ++.++|++|++.++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQ---EGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLL 94 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhc
Confidence 56999999999999999999999999999999999998765 9999999998754332 35799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccccccC
Q 000562 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1419)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 301 (1419)
+++|+.||+.++........ . .+....++++++.+||.+..++.+
T Consensus 95 ~~~t~~~n~~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 139 (220)
T TIGR02982 95 GFLTARQNVQMALELQPNLS---------Y------------------------QEARERARAMLEAVGLGDHLDYYP-- 139 (220)
T ss_pred CCCCHHHHHHHHHHhccCCC---------H------------------------HHHHHHHHHHHHHcCChhhhhcCh--
Confidence 88999999988643221000 0 001224677889999987666554
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 000562 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1419)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 381 (1419)
+.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+.. +++++.++|+.. ..+.+|+|++|
T Consensus 140 ---~~lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sh~~~-~~~~~d~v~~l 214 (220)
T TIGR02982 140 ---HNLSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQ-GCTILIVTHDNR-ILDVADRIVHM 214 (220)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHH-HHhhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999987533 455555677765 56899999999
Q ss_pred cCCeE
Q 000562 382 SEGQI 386 (1419)
Q Consensus 382 ~~G~i 386 (1419)
++|++
T Consensus 215 ~~g~~ 219 (220)
T TIGR02982 215 EDGKL 219 (220)
T ss_pred ECCEE
Confidence 99986
No 497
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.1e-32 Score=325.77 Aligned_cols=210 Identities=29% Similarity=0.371 Sum_probs=176.3
Q ss_pred cceeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCC-----CCCceEEEEccCC--
Q 000562 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQD-- 218 (1419)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d-- 218 (1419)
....+++||||.+++||+++|+|+||||||||.++|+|+++|. +|+|.++|.+.+.. ..++.+-+|+|++
T Consensus 302 ~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~---~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~ 378 (539)
T COG1123 302 GEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPS---SGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYS 378 (539)
T ss_pred cceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEEeCcccccccchhhhhhhheEEEEeCccc
Confidence 4568999999999999999999999999999999999999886 99999999872111 1235677888876
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCccccccc
Q 000562 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1419)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 298 (1419)
.+.|.+||+++|.-......... ..+.+.+++++++..||+.-
T Consensus 379 SLnPr~tV~~~i~epL~~~~~~~---------------------------------~~~~~~rv~~ll~~VgL~~~---- 421 (539)
T COG1123 379 SLNPRMTVGDILAEPLRIHGGGS---------------------------------GAERRARVAELLELVGLPPE---- 421 (539)
T ss_pred ccCccccHHHHHHhHHhhhcccc---------------------------------hHHHHHHHHHHHHHcCCCHH----
Confidence 57899999999986654332211 01123358889999999842
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
..+++...|||||||||+|||||+.+|+++++|||||+||++++.+|.+.|+++.++. +.+.+.|+|+..-+..+||+|
T Consensus 422 ~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~-g~t~lfISHDl~vV~~i~drv 500 (539)
T COG1123 422 FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEEL-GLTYLFISHDLAVVRYIADRV 500 (539)
T ss_pred HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHhhCceE
Confidence 3346677899999999999999999999999999999999999999999999998876 566777999999999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000562 379 ILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1419)
++|++|+||+.||.+++.
T Consensus 501 ~vm~~G~iVE~G~~~~v~ 518 (539)
T COG1123 501 AVMYDGRIVEEGPTEKVF 518 (539)
T ss_pred EEEECCeEEEeCCHHHHh
Confidence 999999999999988874
No 498
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.4e-32 Score=304.77 Aligned_cols=194 Identities=25% Similarity=0.424 Sum_probs=153.9
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC---CceEEEEccCCCCCCCC
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1419)
+.+|+|+|+++++|++++|+||||||||||+++|+|..++. +|+|.++|.++..... ++.++|++|++..++ .
T Consensus 17 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~ 92 (220)
T cd03245 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPT---SGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFY-G 92 (220)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCeEEECCEEhHHCCHHHHHhhEEEeCCCCcccc-c
Confidence 35999999999999999999999999999999999998765 8999999987654322 357999999998776 6
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCcccccc-------
Q 000562 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT------- 297 (1419)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt------- 297 (1419)
||.||+.+..... . ...++.+++.++|++..+.
T Consensus 93 tv~e~l~~~~~~~----~------------------------------------~~~~~~~l~~~~l~~~~~~~~~~~~~ 132 (220)
T cd03245 93 TLRDNITLGAPLA----D------------------------------------DERILRAAELAGVTDFVNKHPNGLDL 132 (220)
T ss_pred hHHHHhhcCCCCC----C------------------------------------HHHHHHHHHHcCcHHHHHhccccccc
Confidence 9999997642110 0 0012234444555443332
Q ss_pred cccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 000562 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1419)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 377 (1419)
.+. .....||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+.... +++|+
T Consensus 133 ~~~-~~~~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~-~~~d~ 207 (220)
T cd03245 133 QIG-ERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLG--D-KTLIIITHRPSLL-DLVDR 207 (220)
T ss_pred eec-CCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcC--C-CEEEEEeCCHHHH-HhCCE
Confidence 222 23457999999999999999999999999999999999999999999998764 3 5666677877765 79999
Q ss_pred EEEEcCCeEEEEc
Q 000562 378 VILLSEGQIVYQG 390 (1419)
Q Consensus 378 vilL~~G~iv~~G 390 (1419)
+++|++|++++.|
T Consensus 208 v~~l~~g~i~~~~ 220 (220)
T cd03245 208 IIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCCeEeecC
Confidence 9999999998764
No 499
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=3.6e-32 Score=311.69 Aligned_cols=207 Identities=23% Similarity=0.293 Sum_probs=169.6
Q ss_pred eeeeecceEeEeCCeEEEEEcCCCCcHHHHHHHHHcCcCCCCCeeeEEEECCccCCCCCC------CceEEEEccCC--C
Q 000562 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQD--W 219 (1419)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d--~ 219 (1419)
+.+|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|+++....+ ++.++|++|++ .
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 46999999999999999999999999999999999998765 9999999998765332 45799999997 3
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCccHHHHHHHhhhcccchhHHHHHHHHHhCCc-cccccc
Q 000562 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1419)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~did~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 298 (1419)
+.+..|+.|++.+...... . .+ ..+....++.+++.+||. ...++.
T Consensus 102 ~~~~~t~~~~l~~~~~~~~-~--~~------------------------------~~~~~~~~~~~l~~~gl~~~~~~~~ 148 (268)
T PRK10419 102 VNPRKTVREIIREPLRHLL-S--LD------------------------------KAERLARASEMLRAVDLDDSVLDKR 148 (268)
T ss_pred cCCCCCHHHHHHHHHHhhc-c--CC------------------------------HHHHHHHHHHHHHHcCCChhHhhCC
Confidence 5677999999976422100 0 00 000122467788899996 445544
Q ss_pred ccCccCCCCChHHhHHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 000562 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1419)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~illlDEptsgLDs~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 378 (1419)
+ +.||||||||++|||||+.+|++++|||||+|||..++..+.+.|+++++. .+++++.++|+..++.+++|++
T Consensus 149 ~-----~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tiiivsH~~~~i~~~~d~i 222 (268)
T PRK10419 149 P-----PQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQ-FGTACLFITHDLRLVERFCQRV 222 (268)
T ss_pred C-----ccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHH-cCcEEEEEECCHHHHHHhCCEE
Confidence 4 469999999999999999999999999999999999999999999998753 2566777899999999999999
Q ss_pred EEEcCCeEEEEcChhhHH
Q 000562 379 ILLSEGQIVYQGPRVSVL 396 (1419)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1419)
++|++|++++.|+.+++.
T Consensus 223 ~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 223 MVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEECCEEeeeCChhhcc
Confidence 999999999999987753
No 500
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=5.4e-33 Score=313.73 Aligned_cols=196 Identities=28% Similarity=0.397 Sum_probs=154.6
Q ss_pred eeeeeceeeEEeCCeEEEEEcCCCCChhHHHHhHhCCCCCceEEEEEEECCccCCc---ccccceEEEEccCCCCCCCcc
Q 000562 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1419)
Q Consensus 842 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lT 918 (1419)
+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 469999999999999999999999999999999999865 468999999987532 233457999999987775 69
Q ss_pred HHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHcCCccccCC-------cccCCCCCCCCHHHHHHHHHHHHHhhCCCcce
Q 000562 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGA-------LIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1419)
Q Consensus 919 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~-------~~g~~~~~~lSgGqrqrl~iA~~L~~~p~ill 991 (1419)
|+|++.+....+ ..+ ..++.++..++.+..+. ... ..+..||||||||++||++|+.+|++++
T Consensus 93 v~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceeec-cCCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999998743211 111 11222333333222111 111 1246899999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhcCeEEEEecCCEEEEeCCC
Q 000562 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1419)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1054 (1419)
|||||+|||+.++..+.+.|++++ +|+|||+++|+++ ++ +.+|++++|.+ |++++.|+.
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999987 7999999999976 34 57999999986 789998874
Done!