Query 000574
Match_columns 1414
No_of_seqs 619 out of 4953
Neff 6.8
Searched_HMMs 29240
Date Tue Mar 26 16:31:43 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000574.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_347-351//hhsearch_pdb/000574hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ugj_A Phosphoribosylformylgly 1.0 1 1 2436.0 123.4 1275 92-1414 9-1303(1303)
2 3ac6_A Phosphoribosylformylgly 1.0 1 1 1093.0 61.8 711 274-1097 1-719 (725)
3 1vk3_A Phosphoribosylformylgly 1.0 1 1 912.5 42.3 596 284-1067 12-614 (615)
4 1vk3_A Phosphoribosylformylgly 1.0 1 1 291.7 22.6 284 790-1096 62-356 (615)
5 3mcq_A Thiamine-monophosphate 1.0 1 1 285.9 24.3 279 339-692 3-302 (319)
6 2zod_A Selenide, water dikinas 1.0 1 1 285.5 24.1 301 310-690 11-344 (345)
7 2yyd_A Selenide, water dikinas 1.0 1 1 281.6 24.2 296 315-690 16-344 (345)
8 3fd5_A Selenide, water dikinas 1.0 1 1 278.7 17.8 278 356-692 64-370 (394)
9 3ac6_A Phosphoribosylformylgly 1.0 1 1 277.2 26.7 286 790-1091 65-362 (725)
10 3u0o_A Selenide, water dikinas 1.0 1 1 276.5 22.2 292 315-685 11-337 (347)
No 1
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=1.00 E-value=1 Score=2435.99 Aligned_cols=1275 Identities=39% Similarity=0.659 Sum_probs=1169.9
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHC
Q ss_conf 49998279989988999999999835099711299999999813899998899999997205689876776202334210
Q 000574 92 EVVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQ 171 (1414)
Q Consensus 92 ~~~~~~g~p~ls~~~~~~Ll~~~~~~~~~~V~~i~t~~~y~v~~~~~L~~~~~~~l~~LL~~~~~~~~~~~~~~~~~~~~ 171 (1414)
.|++|+|.|+|++|+.++|++++++. ..+|.+|+++|||+|+++++|++++.++|.|||.+ .+.. . . ...
T Consensus 9 ~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~--~~~~-~--~----~~~ 78 (1303)
T 3ugj_A 9 MMEILRGSPALSAFRINKLLARFQAA-NLQVHNIYAEYVHFADLNAPLNDSEQAQLTRLLQY--GPAL-S--S----HTP 78 (1303)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHT-TCCCCEEEEEEEEEEEESSCCCHHHHHHHHHHTCC--SCCC-C--C----CCC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHC-CCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCC--CCCC-C--C----CCC
T ss_conf 69995898658999999999999860-89854799999999944889999999999998557--8644-4--6----677
Q ss_pred CCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEE-CCCCCCHHHHHHHHHHCCCCCCCCCCCCC--
Q ss_conf 488229999906987688465679999999099967818999999983-27888856898998710665321111453--
Q 000574 172 KGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLF-SKGALQDNQINDFAAMVHDRMTECVYTEK-- 248 (1414)
Q Consensus 172 ~~~~~~~i~V~pr~g~~~~~ss~a~~i~~~~gl~~v~rie~~~~y~i~-~~~~~~~~~~~~~~~~l~d~mte~~~~~~-- 248 (1414)
... .++|+||+||+|||||||++|+++|||..|.||||+++|++. +. .++++++++..+|||||||+++...
T Consensus 79 --~~~-~~~v~pr~g~~spwss~a~~i~~~~gl~~v~rie~~~~~~~~~~~--~~~~~~~~~~~~l~d~m~e~~~~~~~~ 153 (1303)
T 3ugj_A 79 --AGK-LLLVTPRPGTISPWSSKATDIAHNCGLQQVDRLERGVAYYIEAST--LTAEQWRQVAAELHDRMMETVFSSLTD 153 (1303)
T ss_dssp --CSE-EEEEEECTTCCCHHHHHHHHHHHHTTCTTEEEEEEEEEEEEECTT--CCHHHHHHHHHHTSCTTTEEEESSGGG
T ss_pred --CCC-EEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCC--CCHHHHHHHHHHCCCCCCCEEECCCHH
T ss_conf --763-699972798678627899999997397511038899999992589--999999999975489882479547303
Q ss_pred -CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEE
Q ss_conf -3444445789742897064579999999988579999955599999999864099998888997986301345540003
Q 000574 249 -LTSFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFT 327 (1414)
Q Consensus 249 -~~~f~~~~~~~~~~~i~~~~~~~~~l~~~~~~~gLal~~~el~~~~~~f~~~l~R~Pt~~El~~~~q~wSEHCrhk~f~ 327 (1414)
..+|.+. +|+++.+||+++.++++|+++|+++||||+++||+||++||+ .|||+|||+||+||+|+||||||||+||
T Consensus 154 ~~~lf~~~-~p~~~~~v~~~~~~~~~L~~~~~~~gLaL~~~e~~~i~~~f~-~lgR~Pt~~El~~~~~~wSEHCrhk~f~ 231 (1303)
T 3ugj_A 154 AEKLFIHH-QPAPVSSVDLLGEGRQALIDANLRLGLALAEDEIDYLQEAFT-KLGRNPNDIELYMFAQANSEHCRHKIFN 231 (1303)
T ss_dssp GGGGGCCC-CCCCCCBCCHHHHTTHHHHHHHHHTTCCCCHHHHHHHHHHHH-HHTSCCBHHHHHHHHHHTSHHHHCHHHH
T ss_pred HHHHCCCC-CCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH-HCCCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 66633458-988636872787899999998761878899999999999998-6499988999999997753321564567
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
Q ss_conf 58999695250319999998721299980464306863252687531111689987642335885079998111379988
Q 000574 328 GKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCA 407 (1414)
Q Consensus 328 ~~~~~d~~~~~~~lf~~i~~~~~~~~~~~~~g~~Dnaavi~~~~~~~~~~~~~g~~a~~~~~~~~~~i~~kvEthn~ps~ 407 (1414)
++|+|||+++++++|++|+++++..+++++++|+|||+||++....+|.+... +..+....++|+++||+|||||||+
T Consensus 232 ~~~~id~~~~~~~l~~~i~~t~~~~~~~~~~~~~dna~vi~~~~~~~~~~~~~--~~~~~~~~e~~~v~fK~ETHNHPsa 309 (1303)
T 3ugj_A 232 ADWIIDGKPQPKSLFKMIKNTFETTPDYVLSAYKDNAAVMEGSAVGRYFADHN--TGRYDFHQEPAHILMKVETHNHPTA 309 (1303)
T ss_dssp SEEEETTEEESSCHHHHHHHHHHHCCTTEEECSSSSSEEEEEEEEEEEEECTT--TCBEEEEEEEEEEEEEEEECHHHHH
T ss_pred CCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCC--CCCCCCCCCEEEEEEEEECCCCCCC
T ss_conf 74687571066568999998887588807999567417865023331344678--6432454310379999723678876
Q ss_pred CCCHHHHHHCCCCCCCCHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 89478896234664322002479960477867887358888899999899988899998996999999999999997691
Q 000574 408 VAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKF 487 (1414)
Q Consensus 408 idP~~gA~tgvgg~irDi~amGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~Gi~d~~n~~ 487 (1414)
|+||+||+||+||+|||+.+|||||+|+|++++|+|++|++|+..+|||+ ++++|.+++++++|+.+.+.|+++|||++
T Consensus 310 IePf~GAaTGvGG~iRD~~~~G~GarPiA~~~~~~~~~lr~~~~~~p~e~-~~g~p~~~~~~~~i~~~g~~G~s~ygN~~ 388 (1303)
T 3ugj_A 310 ISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEE-DFGKPERIVTALDIMTEGPLGGAAFNNEF 388 (1303)
T ss_dssp HCHHHHHHHHHHHHHHHHHTSTTCCEEEEEEEEEEESCCCCTTCCCTTCC-CCCCCTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEEECHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCC-CCCCCHHCCCHHHHHHCCCCHHHHHHHHC
T ss_conf 68767642305789975101578777633332466425668877786312-35882001686464401644498877862
Q ss_pred CCEEEEEEEEEECCCCC---CCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCC
Q ss_conf 99042242279531158---987433377448899998560766224899999999999158876664278899866189
Q 000574 488 GEPLIQGYTRTFGMRLP---SGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQ 564 (1414)
Q Consensus 488 GvPivgG~t~s~~~~~~---~g~~~~~~~Pl~~~~~vG~v~~~~i~~~~a~~GD~Ivv~G~~tgr~GlgGa~~ss~~~~~ 564 (1414)
|+|+|+|+|++|+..+. +|++++|++|+|+++++|.++++++.+..+++||.||++|++|||+|+||+++||+.+++
T Consensus 389 Gvp~V~G~~~~~~~~~~~~~~~~~~g~~kp~v~~~gvG~i~~~~~~~~~~~~Gd~Iiv~Gg~tgr~G~gGaa~sS~~~~~ 468 (1303)
T 3ugj_A 389 GRPALTGYFRTYEEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEIVVGAKLIVLGGPAMNIGLGGGAASSMASGQ 468 (1303)
T ss_dssp TCCEEEEEEEECEEEEEETTEEEEEECSSCEEEEEEEEEECGGGSSCCCCCTTCEEEEEECCBCTTCC------------
T ss_pred CCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCC
T ss_conf 99874468899843024555432234578625999999986687220568999999998998776567278876776416
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHC--CCEEEEEECCCCCCCCCCCHH
Q ss_conf 988666653357999999999999999998322599039985997838888998746--981999907877787882289
Q 000574 565 NDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVL 642 (1414)
Q Consensus 565 ~~~~~~~~~Vq~~dp~~ek~l~~~i~~~~el~~~~~i~ai~DigaGGL~~al~Ela~--~~G~~Idl~~iP~~~~~l~p~ 642 (1414)
.++++++++||++||++||++++++++|+++++.++|++|||+|+|||+++|.||++ ++|++|++++||+++++|+|+
T Consensus 469 ~~~~~~~~~VQ~g~p~~ek~~~~li~~~lel~~~~~V~a~~D~t~GGL~~~l~Ema~~sgvG~~Idld~vP~~~~gl~p~ 548 (1303)
T 3ugj_A 469 SDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELRDILSDEPGMSPL 548 (1303)
T ss_dssp -----CGGGCCCCCHHHHHHHHHHHHHHHTTGGGCCEEEEEECCTTTHHHHHHHHHHHTTCEEEEEGGGSCBSCTTCCHH
T ss_pred CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCHH
T ss_conf 53235852113188889999999999999874248826999789768999999999976974999866587883578999
Q ss_pred HHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCC
Q ss_conf 99604345216999967897899999977399727999999488399995741000257999999994872133340899
Q 000574 643 EIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDM 722 (1414)
Q Consensus 643 ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~i~~~~~~~~~~~~~~~~~~~~~dl~~~~l~~~~ 722 (1414)
|+|++|+||||+++|+|++.++++++|+++++++++||+||+++++++.+.. ++++++|+|+++|++++
T Consensus 549 ei~~sesqerml~~V~pe~~~~~~~~~~~~g~~a~vIG~Vt~~~~v~l~~~~-----------~g~~v~dlp~~~L~~~~ 617 (1303)
T 3ugj_A 549 EIWCNESQERYVLAVAADQLPLFDELCKRERAPYAVIGDATEEQHLSLHDNH-----------FDNQPIDLPLDVLLGKT 617 (1303)
T ss_dssp HHHHCCCSSEEEEEECGGGHHHHHHHHHHHTCCEEEEEEEESSCEEEEEETT-----------TTEEEEEEEHHHHTCCC
T ss_pred HHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEECC-----------CCEEEEECCHHHHCCCC
T ss_conf 9975757051999988778999999998759986999999669769999779-----------98599734536644899
Q ss_pred CCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 97200123458789978989998999999999709998750226540224458541002336887897683899984598
Q 000574 723 PQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYT 802 (1414)
Q Consensus 723 p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~vL~~p~V~SK~~i~~qyDr~V~g~tv~~p~vGp~~~p~~DaAVi~~~~~ 802 (1414)
|+++++.+++++...+++. +..++.+++++||++||||||+|||+||||+|||+||+||||||||.|++||||+++.+.
T Consensus 618 p~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~vL~~pnvaSK~~l~~~~D~~V~g~tv~~~~vGp~q~p~~DaAVi~~~~~ 696 (1303)
T 3ugj_A 618 PKMTRDVQTLKAKGDALNR-ADITIADAVKRVLHLPTVAEKTFLVTIGDRTVTGMVARDQMVGPWQVPVADCAVTTASLD 696 (1303)
T ss_dssp CCCEEEECCCCCCCCCCCC-TTCCHHHHHHHHTTSTTTSCCHHHHTTSCSCTTSCEEECSEETTTTEECCSSEEEESSTT
T ss_pred CCEECCCCCCCCCCCCCCC-CCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECC
T ss_conf 7310234445755444576-767999999998628742121328885176457605440233677899887699998279
Q ss_pred CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHHH
Q ss_conf 8137499985479988889999999999998510111476541011123322334478871799999999999-999992
Q 000574 803 DLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALA-EAMIEL 881 (1414)
Q Consensus 803 ~~~gia~s~g~~p~~~~~dP~~ga~~AV~eai~niaa~Ga~pl~~v~~s~n~~~p~~~~~~~~~l~~a~~gl~-dac~~l 881 (1414)
+.++++||+|++|+++.+|||++|++||+||++||+|||+.|+..+++++||||+...|+++++|+++++|++ |+|++|
T Consensus 697 ~~~gla~s~g~~p~~~~~dP~~ga~~AVaealsnlaA~Ga~pl~~v~lsln~~~~~g~P~~~~~L~~a~~g~~~d~c~~l 776 (1303)
T 3ugj_A 697 SYYGEAMSIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYDAVKAVGEELCPQL 776 (1303)
T ss_dssp CSCEEEEEEEECGGGGGTCHHHHHHHHHHHHHHHHTTSCCCSGGGCEEEEEEECBTTSTTHHHHHHHHHHHHHTTHHHHH
T ss_pred CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 98499999831897423699999999999998875108996689917623023345899609999999999899999984
Q ss_pred CCCCCCCCCCCCCCCCCCC----CEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf 9810234432223222699----300008738999999818999313888667999189999918996664168999996
Q 000574 882 GIAIDGGKDSLSMAAYSGG----EVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVF 957 (1414)
Q Consensus 882 gipivgGkdSls~~~~~~~----~~i~~ppTlvisa~G~v~d~~~~itp~~k~~Gd~~li~v~lg~~~~~LGGS~l~~~~ 957 (1414)
|+|++||||||||+++|++ +.+++|||++|+++|.++|+++++||++|++|| .|++|++|.++.+||||+|++++
T Consensus 777 gvpiiGGkdSlsn~t~~~~~g~~~~v~~P~TlvitavG~v~dv~~~vt~~~k~~Gd-~LilV~lg~~~~~LGGS~la~~~ 855 (1303)
T 3ugj_A 777 GLTIPVGKDSMSMKTRWQEGNEQREMTSPLSLVISAFARVEDVRHTLTPQLSTEDN-ALLLIDLGKGHNALGATALAQVY 855 (1303)
T ss_dssp TCEEEEEEEECBCEEEECCC--CEEEECCCEEEEEEEEEESCGGGCCCSCCCCSSE-EEEEEETTTTCCCCTTSHHHHHT
T ss_pred CCCEEECCCCCCCCEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC-EEEEEECCCCCCCCCHHHHHHHH
T ss_conf 99754155467540112568875764799851899999887847211720189999-89999888988986578999973
Q ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCCCE
Q ss_conf 20199999999968999999999998724582199818988369998997851872899980899984577760566434
Q 000574 958 DQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGL 1037 (1414)
Q Consensus 958 ~~~g~~~P~v~d~~~lk~~~~~v~~li~~glV~A~hDvSdGGL~~aL~EMa~ag~~G~~Idl~~~~~~~~~~LFsEs~G~ 1037 (1414)
+++++.+|++++++.++++++++++++++|+|+|+||+|||||+++|+|||+++++|++|+++.++.+++..||+|++|+
T Consensus 856 g~~g~~~P~vd~~~~lk~~~~~v~~li~~G~v~AahDvSdGGLa~aL~Ema~as~vG~~Idl~~ip~~~~~~LF~E~~G~ 935 (1303)
T 3ugj_A 856 RQLGDKPADVRDVAQLKGFYDAMQALVAARKLLAWHDRSDGGLLVTLAEMAFAGHCGVQVDIAALGDDHLAALFNEELGG 935 (1303)
T ss_dssp TCCCSCCCCCCCHHHHHHHHHHHHHHHHTTCCSEEEECCTTHHHHHHHHHHHHHTSEEEEECGGGCSCHHHHHHCCCSEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCE
T ss_conf 84468898988899999999999999976985799847888299999999985796099973678875668975879996
Q ss_pred EEEEECCCHHHHHHHHHHCCCC--EEEEEEEECCCCEEEEECCEEEEECCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHH
Q ss_conf 9999368999999999883998--89999980899199999998988503899999863200879863203321144420
Q 000574 1038 VLEVSKSNLDTVSKKLHDAGVS--AEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKE 1115 (1414)
Q Consensus 1038 Vi~V~~~~~~~v~~~l~~~gi~--~~~IG~v~~~~~l~i~~~g~~i~~~~l~~L~~~w~~~s~~l~~~~~~~~~~~~e~~ 1115 (1414)
|++|++++.+++++.+++.|++ +++||+|++++.+.|..+++.+++.++++|+++|+++||+|+++++||.|+++|++
T Consensus 936 vv~V~~~~~~~v~~~l~~~gi~~~a~~IG~V~~~~~l~i~~~g~~~~~~~~~~l~~~w~~ts~~~~~~~~~~~~~~~e~~ 1015 (1303)
T 3ugj_A 936 VIQVRAEDRDAVEALLAQYGLADCVHYLGQALAGDRFVITANDQTVFSESRTTLRVWWAETTWQMQRLRDNPQCADQEHE 1015 (1303)
T ss_dssp EEEEEGGGHHHHHHHHHHTTCGGGEEEEEEEESSSEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred EEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 99998899999999998679987608998991798389998999999843999999889889986434568135677665
Q ss_pred CCCCCCCC--CEEEEECCCCCHHHCCC-CCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCE
Q ss_conf 12346898--50363089862010024-6899789999029976879999999984995299625666575469137489
Q 000574 1116 GLKSRCEP--LWKLSFTPSLTDEKYMN-ATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRG 1192 (1414)
Q Consensus 1116 ~~~~~~~~--~~~l~~~~~~~~~~~~~-~~~~~kVaVl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dg 1192 (1414)
.++++..| .++++|++......+.. ...+|||+||++||+||++++++||+++|+++++++++|+..++..+++||+
T Consensus 1016 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~pkVaIi~~~G~N~~~~~~~A~~~aG~~~~~v~~~dl~~~~~~l~~~d~ 1095 (1303)
T 3ugj_A 1016 AKANDTDPGLNVKLSFDINEDIAAPYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLGGRIGLGNFHA 1095 (1303)
T ss_dssp HTTCTTCCCSCCBCSSCTTCCTTHHHHTTTCCCEEEEEECTTCCCHHHHHHHHHHTTCEEEEEEHHHHHTTSCCGGGCSE
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCE
T ss_conf 53035677743101446510134321236899889999669809789999999974996199851455567002766999
Q ss_pred EEECCCCCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 999199782433202312167785101179999998809998399990256998760-9647999887457899999872
Q 000574 1193 IVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL-GWIPGPQVGGVHGAGGDPSQPR 1271 (1414)
Q Consensus 1193 lvlpGG~s~~D~l~ag~~~a~~~l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~l-glip~~~g~~~~~~~~~~~~p~ 1271 (1414)
|||||||||+|+++++++|+.+.+++..+++++++|+.++++|+||||||||+|+++ |++| +. ..||+
T Consensus 1096 lvlPGGfSygD~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~e~~gllP---g~--------~~~p~ 1164 (1303)
T 3ugj_A 1096 LVACGGFSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMSNLRELIP---GS--------ELWPR 1164 (1303)
T ss_dssp EEECCSCGGGGTTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHHTTGGGST---TC--------TTCCE
T ss_pred EEECCCCCCHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCC---CC--------CCCCE
T ss_conf 99978785333212313678888755458999999998679709998889999997207678---87--------78876
Q ss_pred EEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 65159873498569999835898223588896799998624651780790358897316936899836999976668999
Q 000574 1272 FVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFN 1351 (1414)
Q Consensus 1272 l~~N~s~rfe~r~v~v~i~~~~s~~l~g~~g~~l~~~~~Hgegr~~~~~~~~~~~l~~~~~i~~~y~d~~g~~~~~yP~N 1351 (1414)
|++|+|+||||||++++|++++|+||++|+|+++|+|++||||||+|++++.+++|.+++||++||+|++|++|++||+|
T Consensus 1165 l~~N~s~~f~~r~~~~~v~~~~s~~~~~~~g~~~~i~vaHgEG~~~~~~~~~l~~l~~~~~v~~rY~d~~g~~~~~yp~N 1244 (1303)
T 3ugj_A 1165 FVRNHSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVRDDAHLAALESKGLVALRYVDNFGKVTETYPAN 1244 (1303)
T ss_dssp EECCTTSSCEEEEEEEEECCCSCGGGTTCTTCEEEEEEEESSCEEECSSHHHHHHHHHTTCEEEEEBCTTSCBCCSTTTS
T ss_pred EECCCCCCEEEECEEEEECCCCCHHHHCCCCCEEEEEEEECCCCEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
T ss_conf 73378898488376799799899456003798971302717877542888999999867917999957988736678889
Q ss_pred CCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 899867615998489859998567865665413778999877889999936999999998619
Q 000574 1352 VNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS 1414 (1414)
Q Consensus 1352 PnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~n~~~~~~ 1414 (1414)
||||+++||||||+|||||||||||||++++|||+|+|.+|. +.|||++||+||++||+
T Consensus 1245 PNGS~~~IaGi~s~~Grvlg~MpHPEr~~~~~~~~~~p~~~~----~~~pw~~~F~na~~w~~ 1303 (1303)
T 3ugj_A 1245 PNGSPNGITAVTTENGRVTIMMPHPERVFRTVANSWHPENWG----EDSPWMRIFRNARKQLG 1303 (1303)
T ss_dssp SSCCGGGEEEEECTTSSEEEESSBGGGSSBGGGCSSCCTTCC----SBCTTHHHHHHHHHHHC
T ss_pred CCCCHHHCEEEECCCCCEEEECCCHHHCCCCCCCCCCCCCCC----CCCCHHHHHHHHHHHCC
T ss_conf 989955302747799988997478677055200467774357----89929999999998609
No 2
>3ac6_A Phosphoribosylformylglycinamidine synthase 2; purine metabolism, ATP-binding, ligase, nucleotide-binding, biosynthesis; HET: ADP; 2.35A {Thermus thermophilus} PDB: 3viu_A*
Probab=1.00 E-value=1 Score=1092.95 Aligned_cols=711 Identities=23% Similarity=0.308 Sum_probs=610.6
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCC
Q ss_conf 99998857999995559999999986409999888899798630134554000358999695250319999998721299
Q 000574 274 LEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANP 353 (1414)
Q Consensus 274 l~~~~~~~gLal~~~el~~~~~~f~~~l~R~Pt~~El~~~~q~wSEHCrhk~f~~~~~~d~~~~~~~lf~~i~~~~~~~~ 353 (1414)
++++++++|| +++|++||+++ ||||||++||+||+|+||||||||+ .+++|++ +...+
T Consensus 1 ~~~~~~~~~l--~~~e~~~~~~~----l~r~pt~~El~~~~~~wsehc~~k~------------~~~~~~~----~~~~~ 58 (725)
T 3ac6_A 1 MEALAKEIGI--PEGEYREIVQR----LGREPNRVELLLFKVMWSEHCAYKN------------SRPLLKA----LPKEG 58 (725)
T ss_dssp CHHHHHHHTC--CHHHHHHHHHH----HTSCCCHHHHHHHHHHTSHHHHCTT------------THHHHTT----SCCCC
T ss_pred CCCHHHHCCC--CHHHHHHHHHH----HCCCCCHHHHHHHHHHHHHHHCCCC------------CHHHHHC----CCCCC
T ss_conf 9022867699--99999999998----4899989999998646315325788------------8899812----77799
Q ss_pred CCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCE
Q ss_conf 98046430686325268753111168998764233588507999811137998889478896234664322002479960
Q 000574 354 NNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSF 433 (1414)
Q Consensus 354 ~~~~~g~~Dnaavi~~~~~~~~~~~~~g~~a~~~~~~~~~~i~~kvEthn~ps~idP~~gA~tgvgg~irDi~amGrGA~ 433 (1414)
++++++++|||||++. ++++.++|++|+||||++++||+||++++++++||++|| ||+
T Consensus 59 ~~v~~g~gdDaavi~~--------------------~~~~~l~~~ve~h~~p~~~~P~~gg~~~v~~~l~Di~am--GA~ 116 (725)
T 3ac6_A 59 EAVLQGPGENAGVVRV--------------------GEGWAVAFKIESHNHPSAVEPFQGAATGVGGILRDIMSM--GAR 116 (725)
T ss_dssp TTEEECTTSSSEEEEE--------------------ETTEEEEEEEEECHHHHHHCHHHHHHHHHHHHHHHHHHT--TCE
T ss_pred CCEEEECCCCEEEEEE--------------------CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC--CCH
T ss_conf 9668833885689993--------------------798199999476799766383778999876665101005--876
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCC
Q ss_conf 47786788735888889999989998889999899699999999999999769199042242279531158987433377
Q 000574 434 VVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLK 513 (1414)
Q Consensus 434 P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~Gi~d~~n~~GvPivgG~t~s~~~~~~~g~~~~~~~ 513 (1414)
|++++++|+|+++..| ..++++.++++|+++|||++|+|+|||+|. ++.. +..+
T Consensus 117 P~~~l~~l~~~~~~~~------------------~~~~~l~~~~~Gi~~~~~~~G~~lvgG~t~-~~~~-------~~~~ 170 (725)
T 3ac6_A 117 PIALLDSLRFGPPEEA------------------RSRYLLKGVVSGIAFYGNAIGVPTVGGDLY-FHEG-------YREN 170 (725)
T ss_dssp EEEEEEEEEESCTTSH------------------HHHHHHHHHHHHHHHHHHHHTCCEEEEEEE-ECGG-------GSSS
T ss_pred HHHHEEEEECCCCCCC------------------CHHHHHHHHHHHHHHHHHHHCCCEEEEEEE-EECC-------CCCC
T ss_conf 5745566872799873------------------289999999999999989868976689999-7278-------6898
Q ss_pred CEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 44889999856076622489999999999915887666427889986618998866665335799999999999999999
Q 000574 514 PIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACI 593 (1414)
Q Consensus 514 Pl~~~~~vG~v~~~~i~~~~a~~GD~Ivv~G~~tgr~GlgGa~~ss~~~~~~~~~~~~~~Vq~~dp~~ek~l~~~i~~~~ 593 (1414)
|++.++++|.++++++.++.+++||.|+++|+++|++|+||+++++...... ...+++.||+++|++++++ +++|+
T Consensus 171 ~~i~~~~vG~v~~~~~~~~~a~~GD~ii~~G~~~g~~G~gg~~~~~~~~~~~-~~~~~p~v~~g~~~~e~~~---~~~~~ 246 (725)
T 3ac6_A 171 PLVNAMCLGLLREEHLKRSRASLGRPIYYAGAKTGRDGIGGAAFASRELKEE-KAEDRPAVQVGDPFLGKLL---MEATL 246 (725)
T ss_dssp CEEEEEEEEEEEGGGCCCBCCCTTCEEEEEESCBCSCCC-----------------------CCCHHHHHHH---HHHHH
T ss_pred CEEEEEEEEEECHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHH---HHHHH
T ss_conf 2299999999670441567899999999988888988626999998760232-1367753444888889999---99999
Q ss_pred HHHCCCCCEEEECCCCCCHHHHHHHHHC--CCEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHH
Q ss_conf 8322599039985997838888998746--98199990787778788228999604345216999967897899999977
Q 000574 594 EMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICER 671 (1414)
Q Consensus 594 el~~~~~i~ai~DigaGGL~~al~Ela~--~~G~~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~ 671 (1414)
++.+.++|++|||+|+|||++++.||+. ++|++|+++++|+++.+|+|+|+|++|+||||+++|+|++.++|++++++
T Consensus 247 ~l~~~~~i~a~~Di~~gGL~~~l~ema~~sg~g~~i~l~~vP~~~~~~~~~e~~~se~q~~ll~~v~~~~~~~~~~~~~~ 326 (725)
T 3ac6_A 247 EAIELDLVEGVQDMGAAGLTSSLSELAHKSGLGVELHLDLVPTREEGMTPEELLLSESQERMVLVPKEGKEKALEEVFGR 326 (725)
T ss_dssp HHHHTTCEEEEEECCTTHHHHHHHHHHHHTTSEEEEEGGGSCBSSSSCCHHHHHHCCCSSEEEEEECTTCHHHHHHHHHH
T ss_pred HHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEECHHHHHHHHHHHHH
T ss_conf 98734873488867997599999999985597499983567777678889999862885738999875778999999997
Q ss_pred CCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCEECCCCCCC--CCCCCCC-CCCCCHH
Q ss_conf 399727999999488399995741000257999999994872133340899972001234587--8997898-9998999
Q 000574 672 ERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQ--AREPLDI-APGITVM 748 (1414)
Q Consensus 672 ~~~~~~vIG~vt~~~~l~i~~~~~~~~~~~~~~~~~~~~~dl~~~~l~~~~p~~~~~~~~~~~--~~~~~~~-~~~~~l~ 748 (1414)
+++++++||+||+++++++.+ +++.++|+|+++|.+ .|+++++.++++. ...+.+. +...+++
T Consensus 327 ~~~~~~vIG~vt~~~~~~~~~-------------~g~~~~d~~~~~l~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (725)
T 3ac6_A 327 WGLDCVPVARTIPERVFRVLF-------------RGEVVAEVPTEALAE-APTYVRVGREDPEVRRLRETPIPPLEADPQ 392 (725)
T ss_dssp TTCCEEEEEEEESSSEEEEEE-------------TTEEEEEEEHHHHHS-CCCCCCCCCCCHHHHHHHTSCCCCCCCCHH
T ss_pred CCCCEEEEEEEEECCEEEEEE-------------CCCEEEECCHHHHHC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 599879999998388699997-------------992798757899706-995156546766544344334577755799
Q ss_pred HHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHH
Q ss_conf 9999997099987502265402244585410023368878976-838999845988137499985479988889999999
Q 000574 749 DSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITL-ADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMAR 827 (1414)
Q Consensus 749 ~~l~~vL~~p~V~SK~~i~~qyDr~V~g~tv~~p~vGp~~~p~-~DaAVi~~~~~~~~gia~s~g~~p~~~~~dP~~ga~ 827 (1414)
++++++|++||||||+||++||||+|+++|+++ |+ +||||+++.+. .+++++|+|++|+++.+|||.+|+
T Consensus 393 ~~~~~~l~~p~v~sK~~i~~~~D~~v~~~tv~~--------pg~~DaaVi~~~~~-~~~la~s~d~~~~~~~~dP~~~g~ 463 (725)
T 3ac6_A 393 EVLRRLLASPNLASREAVYERYDHQVGTRTALL--------PGKGDAAVLWIKGT-RLGVAAKVDQNPRYSRLHPRLGAM 463 (725)
T ss_dssp HHHHHHHTSTTTSCCHHHHTTCCCCBCSSEEEC--------CSCCSSEEEEETTS-SEEEEEEEECCHHHHHHCHHHHHH
T ss_pred HHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEC--------CCCCCEEEEEECCC-CEEEEEEECCCCCEEEECHHHHHH
T ss_conf 999998649875470437886146568861334--------78775589980799-869999975899706667889999
Q ss_pred HHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 99999851011147654101112332233447887179999999999999999298102344322232226993000087
Q 000574 828 LAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPG 907 (1414)
Q Consensus 828 ~AV~eai~niaa~Ga~pl~~v~~s~n~~~p~~~~~~~~~l~~a~~gl~dac~~lgipivgGkdSls~~~~~~~~~i~~pp 907 (1414)
+||+|+++||+|||++|+. +..++||+.|.+ |+..+++.++++|++++|+++|+|++|||||+||++ ++ ..++|
T Consensus 464 ~AVaeav~di~a~Ga~Pl~-~~~~l~~g~~~~-~~~~~~l~~~v~Gi~~a~~~~gv~ivgG~ts~~~~~--~~--~~i~p 537 (725)
T 3ac6_A 464 HALAEACRNVSVVGAKPLA-YTDGLNLGSPET-PEGYHELAETIAGLKEASEALGVPVVSGNVSLYNES--GG--KRIPP 537 (725)
T ss_dssp HHHHHHHHHHHHTTCEEEE-EEEEEECSCSSS-HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCEE--TT--EECCC
T ss_pred HHHHHHHHHHHHCCCCCEE-EEEEEECCCCCC-HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC--CC--CCCCC
T ss_conf 9999999999973883008-999998689997-448999999999999999980998434360005777--89--86677
Q ss_pred CEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH-HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 389999998189993138886679991899999189966641689999-9620199999999968999999999998724
Q 000574 908 SLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQ-VFDQVGNESPDLEDVPYLKRVFETVQDLIGD 986 (1414)
Q Consensus 908 Tlvisa~G~v~d~~~~itp~~k~~Gd~~li~v~lg~~~~~LGGS~l~~-~~~~~g~~~P~v~d~~~lk~~~~~v~~li~~ 986 (1414)
|++++++|.++ .++.+++.++++|| .|+++ |....++|||.+++ .++..++..|++ |++.++..++.+++++++
T Consensus 538 tl~i~~vG~v~-~~~~i~~~~~~~GD-~lil~--g~~g~~~ggs~l~~~~~~~~~~~~p~~-d~~~~~~~~~~v~~l~~~ 612 (725)
T 3ac6_A 538 TAMVGVVGVLE-VDKRAEMGFRRPGE-VLLLI--GEERGELGASEVLYLLTGKEFGHPPRL-DLGREKAVQEAIRDLIQR 612 (725)
T ss_dssp EEEEEEEEEEE-GGGCCBSSCCSTTC-EEEEE--SCSCCBCTTCHHHHHHHSCCCSCCCCC-CHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEEEEEC-HHHCCCHHHCCCCC-EEEEE--CCCCCCCCHHHHHHHHHCCCCCCCCCC-CHHHHHHHHHHHHHHHHC
T ss_conf 60799999762-41154844489999-99998--689887638999999846337989987-989999999999999856
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCCC-EEEEEECCCHHHHHHHHHHCCCCEEEEEE
Q ss_conf 58219981898836999899785187289998089998457776056643-49999368999999999883998899999
Q 000574 987 ELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELG-LVLEVSKSNLDTVSKKLHDAGVSAEIIGQ 1065 (1414)
Q Consensus 987 glV~A~hDvSdGGL~~aL~EMa~ag~~G~~Idl~~~~~~~~~~LFsEs~G-~Vi~V~~~~~~~v~~~l~~~gi~~~~IG~ 1065 (1414)
++|+|+||+|+|||+++|+|||+++++|++|+++. +....||+|++| +|++|++++.+++++.+++.|+++.+||+
T Consensus 613 ~~v~a~~Dis~GGL~~~L~ema~~~~~G~~i~~~~---~~~~~Lf~e~~G~~vv~v~~~~~~~~~~~l~~~g~~~~~IG~ 689 (725)
T 3ac6_A 613 GLTRTAHDVAEGGLLLALAEMTFPYGVGATVEVRE---EGLEALFGEAPSRVLFTVEKTRLQEATLLLEERGLPYRVLGE 689 (725)
T ss_dssp TSCSBEEECCTTHHHHHHHHTTTTTCCCEEEECSC---CSHHHHTCBCSSCEEEEECGGGHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECC---CHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 98799995898819999999983179728997473---068886599987699998388999999999867998599999
Q ss_pred EECCCCEEEEECCEEEEECCHHHHHHHHHHCC
Q ss_conf 80899199999998988503899999863200
Q 000574 1066 VNSSHSVEIKVDGLTHLNEKTSLLRDMWEETS 1097 (1414)
Q Consensus 1066 v~~~~~l~i~~~g~~i~~~~l~~L~~~w~~~s 1097 (1414)
|++ +.+.+..+++ +++.++++|+++|+++.
T Consensus 690 v~~-~~~~i~~~~~-~~~~~~~~l~~~w~~~~ 719 (725)
T 3ac6_A 690 TGG-KSLTVLTPGG-VLEWSLEELLSAWKAPL 719 (725)
T ss_dssp ECS-SEEEEEETTE-EEEEEHHHHHHHHHHHH
T ss_pred EEC-CEEEEEECCE-EEEEEHHHHHHHHHHHH
T ss_conf 917-8799960875-89945999999999999
No 3
>1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A*
Probab=1.00 E-value=1 Score=912.46 Aligned_cols=596 Identities=20% Similarity=0.258 Sum_probs=499.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCC
Q ss_conf 99955599999999864099998888997986301345540003589996952503199999987212999804643068
Q 000574 284 AFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDN 363 (1414)
Q Consensus 284 al~~~el~~~~~~f~~~l~R~Pt~~El~~~~q~wSEHCrhk~f~~~~~~d~~~~~~~lf~~i~~~~~~~~~~~~~g~~Dn 363 (1414)
-|.++|.+ +|++.||||||++||+||+|+||||||||+ .+++|+++ .. .+.+||
T Consensus 12 ~~~~~~~~----~~~~~l~r~pt~~el~~~~~~~sehc~~k~------------~~~~~~~~----~~------~g~gdD 65 (615)
T 1vk3_A 12 HMKLRYLN----ILKEKLGREPTFVELQAFSVMWSEHCGYSH------------TKKYIRRL----PK------TGFEGN 65 (615)
T ss_dssp --CHHHHH----HHHHHHTSCCCHHHHHHHHHHTSHHHHCTT------------THHHHHTS----CB------CTTSSS
T ss_pred HCHHHHHH----HHHHHCCCCCCHHHHHHHHHHCCCCCCCCC------------HHHHHHHC----CC------CCCCCC
T ss_conf 12299999----999861899988999998664478533675------------08889524----67------899986
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCEEEEEEEEEEE
Q ss_conf 63252687531111689987642335885079998111379988894788962346643220024799604778678873
Q 000574 364 SSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCV 443 (1414)
Q Consensus 364 aavi~~~~~~~~~~~~~g~~a~~~~~~~~~~i~~kvEthn~ps~idP~~gA~tgvgg~irDi~amGrGA~P~a~l~~l~~ 443 (1414)
|||++. .+++.++|++|+||||++++||.||++++++++||++|| ||+|++++++|+|
T Consensus 66 Aavi~~--------------------~~~~~l~~t~e~h~~p~~~~P~~gg~~av~~~lrDi~a~--GA~P~a~l~~l~~ 123 (615)
T 1vk3_A 66 AGVVNL--------------------DDYYSVAFKIESHNHPSAIEPYNGAATGVGGIIRDVLAM--GARPTAIFDSLHM 123 (615)
T ss_dssp TTEEES--------------------SSSEEEEEEEEECHHHHHHCHHHHHHHHHHHHHHHHHHT--TCEEEEEEEEEEE
T ss_pred EEEEEE--------------------CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCC--CCEEHHHHHHHHH
T ss_conf 489995--------------------798089999532598344085588999878886250255--7325466234027
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 58888899999899988899998996999999999999997691990422422795311589874333774488999985
Q 000574 444 GNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQ 523 (1414)
Q Consensus 444 g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~Gi~d~~n~~GvPivgG~t~s~~~~~~~g~~~~~~~Pl~~~~~vG~ 523 (1414)
++ | +.++++|++++||++|+|+|||+|. +... +..+|++.++++|.
T Consensus 124 g~---------~-----------------l~~~~~Gi~~~~~~~GvplvGG~t~-~~~~-------y~~~p~~~~~~vG~ 169 (615)
T 1vk3_A 124 SR---------I-----------------IDGIIEGIADYGNSIGVPTVGGELR-ISSL-------YAHNPLVNVLAAGV 169 (615)
T ss_dssp SS---------C-----------------CHHHHHHHHHHHHHHTCCEEEEEEE-ECGG-------GTTCCEEEEEEEEE
T ss_pred HH---------H-----------------HHHHHHHHHHHHHHCCCCEEEEEEE-EECC-------CCCCCEEEEEEEEE
T ss_conf 99---------9-----------------9999999999999809987579999-8348-------78980499999999
Q ss_pred EECCCCCCC-CCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 607662248-9999999999915887666427889986618998866665335799999999999999999832259903
Q 000574 524 IDHNHISKG-EPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPII 602 (1414)
Q Consensus 524 v~~~~i~~~-~a~~GD~Ivv~G~~tgr~GlgGa~~ss~~~~~~~~~~~~~~Vq~~dp~~ek~l~~~i~~~~el~~~~~i~ 602 (1414)
++++++.+. .+++||.|+++|+++|++|++|+++++....... ...+.+|++++++++++ +++++++.+.++|+
T Consensus 170 v~~~~~~~~~~~~~GD~Iil~G~~tg~~G~~g~~~~~~~~~~~~--~~~~~v~~~~~~~e~~~---~~~~~~l~~~~~i~ 244 (615)
T 1vk3_A 170 VRNDMLVDSKASRPGQVIVIFGGATGRDGIHGASFASEDLTGDK--ATKLSIQVGDPFAEKML---IEAFLEMVEEGLVE 244 (615)
T ss_dssp EETTSCCCSSCCSTTCEEEEEESCBCSCC------------------CGGGCCCCCHHHHHHH---HHHHHHHHHHTCCS
T ss_pred ECHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCC--CCCCCCCCCCHHHHHHH---HHHHHHHHHCCCEE
T ss_conf 85788357667998499999888988774618999999861434--55665676987999999---99999987359746
Q ss_pred EEECCCCCCHHHHHHHHHC--CCEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEE
Q ss_conf 9985997838888998746--98199990787778788228999604345216999967897899999977399727999
Q 000574 603 SIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIG 680 (1414)
Q Consensus 603 ai~DigaGGL~~al~Ela~--~~G~~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG 680 (1414)
+|||+|+|||+++|.||+. ++|++|+++++|+++.+++++|+|++|+|+||+++|+|++.++|+++++++++++++||
T Consensus 245 a~~Dis~gGL~~~l~ema~~sg~G~~Idl~~vP~~~~~~~~~e~l~sesq~r~l~~v~~~~~~~~~~~~~~~g~~~~vIG 324 (615)
T 1vk3_A 245 GAQDLGAGGVLSATSELVAKGNLGAIVHLDRVPLREPDMEPWEILISESQERMAVVTSPQKASRILEIARKHLLFGDVVA 324 (615)
T ss_dssp EEEECCTTHHHHHHHHHHHHTTCEEEEEGGGSCBSSTTCCHHHHHHCCCSSEEEEEECGGGHHHHHHHHHHTTCEEEEEE
T ss_pred EEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 99967996199999999985795199994536788789999999871798849999817999999999987598979999
Q ss_pred EEECCCEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 99948839999574100025799999999487213334089997200123458789978989998999999999709998
Q 000574 681 TISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSV 760 (1414)
Q Consensus 681 ~vt~~~~l~i~~~~~~~~~~~~~~~~~~~~~dl~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~vL~~p~V 760 (1414)
+||+++++++.+ +++.++|+|+++| .+.|++.++..+++ ...+++. .+ .| +
T Consensus 325 ~Vt~~~~l~v~~-------------~g~~~~d~~~~~l-~~~~~~~~~~~~~~-~~~~~~~---~~----------l~-~ 375 (615)
T 1vk3_A 325 EVIEEPVYRVMY-------------RNDLVMEVPVQLL-ANAPEEDIVEYTPG-KIPEFKR---VE----------FE-E 375 (615)
T ss_dssp EEESSCEEEEEE-------------TTEEEEEEEHHHH-HSCCCCCCCCCCCC-SCCCCCC---CC----------CE-E
T ss_pred EEEECCEEEEEE-------------CCEEEEEECHHHH-HCCCHHHCCCCCCC-CCCCCCC---CC----------CC-C
T ss_conf 998188699997-------------9958998129997-16761003435856-5666674---65----------11-0
Q ss_pred CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHCC
Q ss_conf 75022654022445854100233688789768389998459881374999854799888899999999999985101114
Q 000574 761 CSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWA 840 (1414)
Q Consensus 761 ~SK~~i~~qyDr~V~g~tv~~p~vGp~~~p~~DaAVi~~~~~~~~gia~s~g~~p~~~~~dP~~ga~~AV~eai~niaa~ 840 (1414)
|||+|||+||||+|||+|++ .|++||||+++.. .+++++|+|++|+++.+|||++|++||+||++||+||
T Consensus 376 ~sk~~~~~~~D~~v~~~~~~--------~pg~DaaV~~~~~--~~~~~~t~d~~~~~~~~dP~~~g~~Avaealsdl~A~ 445 (615)
T 1vk3_A 376 VNAREVFEQYDHMVGTDTVV--------PPGFGAAVMRIKR--DGGYSLVTHSRADLALQDTYWGTLIAVLESVRKTLSV 445 (615)
T ss_dssp CCHHHHHHTTTCCBSTTSSS--------CGGGSCEEEEEET--TEEEEEEEECCHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCEECCCCCCCCCEEE--------CCCCCEEEEEECC--CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 08000452589998986152--------3488769999769--9189998167985326598999999999998778873
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCC
Q ss_conf 76541011123322334478871799999999999999992981023443222322269930000873899999981899
Q 000574 841 KVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDI 920 (1414)
Q Consensus 841 Ga~pl~~v~~s~n~~~p~~~~~~~~~l~~a~~gl~dac~~lgipivgGkdSls~~~~~~~~~i~~ppTlvisa~G~v~d~ 920 (1414)
|++|+. +.+++||++|++ ++ . +++++++|+.++|++||+|++|||||||+++ + .+.+|||++++++|.+++
T Consensus 446 Ga~p~~-~~~~l~~~~~~~-~~-~-~l~~~~~G~~~~~~~~g~~~igG~~S~~~~~--~--~~~~ppt~~i~a~G~v~~- 516 (615)
T 1vk3_A 446 GAEPLA-ITNCVNYGDPDV-DP-V-GLSAMMTALKNACEFSGVPVASGNASLYNTY--Q--GKPIPPTLVVGMLGKVNP- 516 (615)
T ss_dssp TCEEEE-EEEEEECSCTTT-CH-H-HHHHHHHHHHHHHHHHTCCEEEEEEECCCEE--T--TEECCCEEEEEEEEEECG-
T ss_pred CCCCCE-EEEEEECCCCCC-CH-H-HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--C--CCCCCCEEEEEEEEEECC-
T ss_conf 885142-689974688899-56-7-8999999999999975998421404456767--8--874798009999999557-
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC-CCEEEEECCCCC
Q ss_conf 9313888667999189999918996664168999996201999999999689999999999987245-821998189883
Q 000574 921 TKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDE-LVSTGHDISDGG 999 (1414)
Q Consensus 921 ~~~itp~~k~~Gd~~li~v~lg~~~~~LGGS~l~~~~~~~g~~~P~v~d~~~lk~~~~~v~~li~~g-lV~A~hDvSdGG 999 (1414)
++.++ +++|| |+++ | .|.+ +.+.+++.++.+.+++.++ +++||||||||
T Consensus 517 ~~~~~---~~~Gd--l~l~--g---------------------~~~~-~~~~~~~~~~~~~~~~~~~~~v~a~~DvSdG- 566 (615)
T 1vk3_A 517 QKVAK---PKPSK--VFAV--G---------------------WNDF-ELEREKELWRAIRKLSEEGAFILSSSQLLTR- 566 (615)
T ss_dssp GGCCC---CCSEE--EEEE--E---------------------ESSC-CHHHHHHHHHHHHHHHHTTCEEECCTTSSCH-
T ss_pred CCCCC---CCCCE--EEEE--C---------------------CCCC-CHHHHHHHHHHHHHHHHCCCEEEEEEECCCC-
T ss_conf 75336---77996--9998--8---------------------9989-9999999999999998679928999978778-
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCCC---CHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 6999899785187289998089998---4577760566434999936899999999988399889999980
Q 000574 1000 LLVCTLEMSFAGNYGITLDLNSEGN---SLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVN 1067 (1414)
Q Consensus 1000 L~~aL~EMa~ag~~G~~Idl~~~~~---~~~~~LFsEs~G~Vi~V~~~~~~~v~~~l~~~gi~~~~IG~v~ 1067 (1414)
+|+|| + |++|++|+++.++. ++++.||+|+++ ..+++++.||+|+
T Consensus 567 ---~l~em-~-s~~g~~i~~~~iP~~~~~d~~llfse~~~------------------~~~v~~~~IG~v~ 614 (615)
T 1vk3_A 567 ---THVET-F-REYGLKIEVKLPEVRPAHQMVLVFSERTP------------------VVDVPVKEIGTLS 614 (615)
T ss_dssp ---HHHHH-H-HHTTCEEEECCCCCCSSCEEEEEEESSCC------------------CCSSCEEEEEEEE
T ss_pred ---HHHHH-H-CCCCEEEEECCCCCCCCCCCEEEEECCCC------------------CCCCCEEEEEEEE
T ss_conf ---89997-2-89858997377888887656799955666------------------5797716722574
No 4
>1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A*
Probab=1.00 E-value=1 Score=291.75 Aligned_cols=284 Identities=14% Similarity=0.145 Sum_probs=228.1
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 76838999845988137499985479988889999999999998510111476541011123322334478871799999
Q 000574 790 TLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYD 869 (1414)
Q Consensus 790 p~~DaAVi~~~~~~~~gia~s~g~~p~~~~~dP~~ga~~AV~eai~niaa~Ga~pl~~v~~s~n~~~p~~~~~~~~~l~~ 869 (1414)
+++||||+++.. ...++++++.+++++.+|||.+|+.+|++++|||++|||+|++.+. +++| + .++.+
T Consensus 62 ~gdDAavi~~~~--~~~l~~t~e~h~~p~~~~P~~gg~~av~~~lrDi~a~GA~P~a~l~-~l~~--g-------~~l~~ 129 (615)
T 1vk3_A 62 FEGNAGVVNLDD--YYSVAFKIESHNHPSAIEPYNGAATGVGGIIRDVLAMGARPTAIFD-SLHM--S-------RIIDG 129 (615)
T ss_dssp TSSSTTEEESSS--SEEEEEEEEECHHHHHHCHHHHHHHHHHHHHHHHHHTTCEEEEEEE-EEEE--S-------SCCHH
T ss_pred CCCCEEEEEECC--CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHH-HHHH--H-------HHHHH
T ss_conf 998648999579--8089999532598344085588999878886250255732546623-4027--9-------99999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCC--CCC
Q ss_conf 999999999992981023443222322269930000873899999981899931388866799918999991899--666
Q 000574 870 AATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKG--KRR 947 (1414)
Q Consensus 870 a~~gl~dac~~lgipivgGkdSls~~~~~~~~~i~~ppTlvisa~G~v~d~~~~itp~~k~~Gd~~li~v~lg~~--~~~ 947 (1414)
+++|++++|+++|+|++||++.+...+ ++ .|++.++++|.++. .+.+++..+++|| .|+++ |.. ...
T Consensus 130 ~~~Gi~~~~~~~GvplvGG~t~~~~~y--~~-----~p~~~~~~vG~v~~-~~~~~~~~~~~GD-~Iil~--G~~tg~~G 198 (615)
T 1vk3_A 130 IIEGIADYGNSIGVPTVGGELRISSLY--AH-----NPLVNVLAAGVVRN-DMLVDSKASRPGQ-VIVIF--GGATGRDG 198 (615)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEEECGGG--TT-----CCEEEEEEEEEEET-TSCCCSSCCSTTC-EEEEE--ESCBCSCC
T ss_pred HHHHHHHHHHHCCCCEEEEEEEEECCC--CC-----CCEEEEEEEEEECH-HHCCCCCCCCCCC-EEEEE--CCCCCCCC
T ss_conf 999999999980998757999983487--89-----80499999999857-8835766799849-99998--88988774
Q ss_pred CCHHHHH-HHHHH-C-CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCC-
Q ss_conf 4168999-99620-1-999999999689999999999987245821998189883699989978518728999808999-
Q 000574 948 LGGSALA-QVFDQ-V-GNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEG- 1023 (1414)
Q Consensus 948 LGGS~l~-~~~~~-~-g~~~P~v~d~~~lk~~~~~v~~li~~glV~A~hDvSdGGL~~aL~EMa~ag~~G~~Idl~~~~- 1023 (1414)
++|+.++ ..+.. . ....++..++...+.+.+.+.++++.+.|+|+||+|+|||+.+|.|||.++++|++|+++.++
T Consensus 199 ~~g~~~~~~~~~~~~~~~~~v~~~~~~~e~~~~~~~~~l~~~~~i~a~~Dis~gGL~~~l~ema~~sg~G~~Idl~~vP~ 278 (615)
T 1vk3_A 199 IHGASFASEDLTGDKATKLSIQVGDPFAEKMLIEAFLEMVEEGLVEGAQDLGAGGVLSATSELVAKGNLGAIVHLDRVPL 278 (615)
T ss_dssp ----------------CGGGCCCCCHHHHHHHHHHHHHHHHHTCCSEEEECCTTHHHHHHHHHHHHTTCEEEEEGGGSCB
T ss_pred CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 61899999986143455665676987999999999999873597469996799619999999998579519999453678
Q ss_pred ----CCHHHHHCCCCCCE-EEEEECCCHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCEEEEECCHHHHHHHHHHC
Q ss_conf ----84577760566434-99993689999999998839988999998089919999999898850389999986320
Q 000574 1024 ----NSLFQTLFAEELGL-VLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEET 1096 (1414)
Q Consensus 1024 ----~~~~~~LFsEs~G~-Vi~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i~~~g~~i~~~~l~~L~~~w~~~ 1096 (1414)
.++.+.+|+|+++. +++|++++.+++++++++.|+++++||+|++++.+.+..+|+.+++.++++|.+.|+..
T Consensus 279 ~~~~~~~~e~l~sesq~r~l~~v~~~~~~~~~~~~~~~g~~~~vIG~Vt~~~~l~v~~~g~~~~d~~~~~l~~~~~~~ 356 (615)
T 1vk3_A 279 REPDMEPWEILISESQERMAVVTSPQKASRILEIARKHLLFGDVVAEVIEEPVYRVMYRNDLVMEVPVQLLANAPEED 356 (615)
T ss_dssp SSTTCCHHHHHHCCCSSEEEEEECGGGHHHHHHHHHHTTCEEEEEEEEESSCEEEEEETTEEEEEEEHHHHHSCCCCC
T ss_pred CCCCCCHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEECCEEEEEECHHHHHCCCHHH
T ss_conf 878999999987179884999981799999999998759897999999818869999799589981299971676100
No 5
>3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus flagellatus}
Probab=1.00 E-value=1 Score=285.86 Aligned_cols=279 Identities=16% Similarity=0.180 Sum_probs=208.2
Q ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC-----CCCCCCCCCHHH
Q ss_conf 319999998721299980464306863252687531111689987642335885079998111-----379988894788
Q 000574 339 RTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAET-----HNFPCAVAPYPG 413 (1414)
Q Consensus 339 ~~lf~~i~~~~~~~~~~~~~g~~Dnaavi~~~~~~~~~~~~~g~~a~~~~~~~~~~i~~kvEt-----hn~ps~idP~~g 413 (1414)
++||++|++.++...++++++++|||||++.++ +..+++++++ |++| .++||.+
T Consensus 3 ~~E~~lI~~~~~~~~~~~~~g~GdDaavi~~~~--------------------~~~lv~ttD~~~~~~hf~~-~~~p~~~ 61 (319)
T 3mcq_A 3 ASEFDLIQRYFRRAHPSAVLGVGDDAALIQPSP--------------------GMELAVSADMLVANTHFYP-NIDPWLI 61 (319)
T ss_dssp -----CCCCSCCCCEECTTTCCCGGGGCCCCCT--------------------TCEEEEEEEEEECCTTSCC-CSCHHHH
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC--------------------CCEEEEEECCCCCCCCCCC-CCCHHHH
T ss_conf 888999999974448876658998879986089--------------------9869999556676667799-9899999
Q ss_pred HHHCCCCCCCCHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEE
Q ss_conf 96234664322002479960477867887358888899999899988899998996999999999999997691990422
Q 000574 414 AETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQ 493 (1414)
Q Consensus 414 A~tgvgg~irDi~amGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~Gi~d~~n~~GvPivg 493 (1414)
|++++++++||++|| ||+|+++++++++++ . +.+++.++++|+.++|+++|+|+||
T Consensus 62 G~~ava~~lsDiaam--Ga~P~~~l~~l~~p~--~--------------------~~~~l~~i~~Gi~~~~~~~g~~lvG 117 (319)
T 3mcq_A 62 GWKSLAVNISDMAAM--GAQPRWATLTIALPE--A--------------------DEDWISKFAAGFFACAAQFDIALIG 117 (319)
T ss_dssp HHHHHHHHHHHHHHT--TCEEEEEEEEEEESS--C--------------------CHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHC--CCCHHHHEEEEECCC--C--------------------CHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 999999989999985--996287488898899--9--------------------9999999999999999982995995
Q ss_pred EEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCC-CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 422795311589874333774488999985607662-2489999999999915887666427889986618998866665
Q 000574 494 GYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHI-SKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFN 572 (1414)
Q Consensus 494 G~t~s~~~~~~~g~~~~~~~Pl~~~~~vG~v~~~~i-~~~~a~~GD~Ivv~G~~tgr~GlgGa~~ss~~~~~~~~~~~~~ 572 (1414)
|||.. ..|.+.++++|.+++.+. .+++++|||.|+++| ..|.++.+++.+. ... ..+
T Consensus 118 Gdt~~-------------~~~~i~~t~iG~v~~~~~~~~~~a~~GD~ii~tg----~~G~~~~g~~~~~-~~~----~~~ 175 (319)
T 3mcq_A 118 GDTTR-------------GPLTISVQIMGETPPGASLLRSTARADDDIWVSG----PLGDAALALAAIQ-GRY----PLS 175 (319)
T ss_dssp EEEEE-------------SSCEEEEEEEEEECTTCCCCSSCCCTTEEEEECS----CCSHHHHHHHHHT-TSS----CCC
T ss_pred EECCC-------------CCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEC----CCCHHHHHHHHHH-CCC----CCC
T ss_conf 68678-------------9869999999853798611268999999999988----8447789999973-577----898
Q ss_pred CCCCCCHHHHHHHHHHHH------HHHHHHCCCCCEEEECCCCCCHHHHHHHHHC--CCEEEEEECCCCCCCCC------
Q ss_conf 335799999999999999------9998322599039985997838888998746--98199990787778788------
Q 000574 573 AVQRGDAEMAQKLYRVVR------ACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHT------ 638 (1414)
Q Consensus 573 ~Vq~~dp~~ek~l~~~i~------~~~el~~~~~i~ai~DigaGGL~~al~Ela~--~~G~~Idl~~iP~~~~~------ 638 (1414)
.+..+....++.+ .... .++.+++|||+|. ||+.+|.||++ ++|++|+++++|+.+..
T Consensus 176 -----~~~~~~~~~~~~~p~~~~~~~~~--l~~~v~a~~DiS~-GL~~~L~e~a~~s~vg~~i~~~~iP~~~~~~~~~~~ 247 (319)
T 3mcq_A 176 -----DTELAACGKALHQPQPRVVLGQA--LRGLAHSALDISD-GLLADLGHILEHSQVGAEVWLKAIPKSEVVSAHSQE 247 (319)
T ss_dssp -----HHHHHHHHHHHHCCCCCHHHHHH--TTTTEEEEEECSS-CHHHHHHHHHHHHTCEEEEEGGGSCCCHHHHHTTTS
T ss_pred -----HHHHHHHHHHHHCCCCCHHHHHH--HHCCCCEEEECCH-HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHC
T ss_conf -----68899999998187724899998--7451739898617-399999999997099399944125899899999855
Q ss_pred CCHHHHHCC-CCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEEEE
Q ss_conf 228999604-345216999967897899999977399727999999488399995
Q 000574 639 LSVLEIWGA-EYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVD 692 (1414)
Q Consensus 639 l~p~ei~~s-Esqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~i~~ 692 (1414)
..++++.++ +.+.+|+++|+|++.+++++++++.++++++||+|++++.+.+.+
T Consensus 248 ~~~~~~~l~~G~d~~ll~~v~~~~~~~~~~~l~~~g~~~~~IG~V~~~~~~~~~~ 302 (319)
T 3mcq_A 248 VAIQKMILSGGDDYELCFTASTQHRQQIADIGRQLSLDMAVIGRITDTQQLVIHG 302 (319)
T ss_dssp HHHHHHHHHCSCCCCEEEEEEGGGHHHHHHHHHHTTCCCEEEEEEESSCCEEEEC
T ss_pred CCHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEC
T ss_conf 7879998708982569999958999999999987599808999998388559986
No 6
>2zod_A Selenide, water dikinase; FULL-length selenophosphate synthetase, transferase, ATP- binding, magnesium, nucleotide-binding, selenium; 1.98A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 2yye_A 2zau_A
Probab=1.00 E-value=1 Score=285.49 Aligned_cols=301 Identities=14% Similarity=0.097 Sum_probs=211.8
Q ss_pred HHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99798630134554000358999695250319999998721299980464306863252687531111689987642335
Q 000574 310 LFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSES 389 (1414)
Q Consensus 310 l~~~~q~wSEHCrhk~f~~~~~~d~~~~~~~lf~~i~~~~~~~~~~~~~g~~Dnaavi~~~~~~~~~~~~~g~~a~~~~~ 389 (1414)
+....-++...|-.|.-. ..|-+++++......+++++|++|||||++..
T Consensus 11 ~~l~~~~~~~GCg~K~~~-----------~~L~~~l~~l~~~~~~~~~~g~GDDaAvi~~~------------------- 60 (345)
T 2zod_A 11 VELLKLVRSSGCAAKVGP-----------GDLQEILKGFNIYTDESTLVSIGDDAGVYEHN------------------- 60 (345)
T ss_dssp -CGGGGCC---------------------CCCCHHHHHSCCCCC---------CCCEEEET-------------------
T ss_pred HHHHHHHCCCCCCCCCCH-----------HHHHHHHHHCCCCCCCCCCCCCCCCEEEEECC-------------------
T ss_conf 789888514875220699-----------99999998467889976521798876998359-------------------
Q ss_pred CCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 88507999811137998889478896234664322002479960477867887358888899999899988899998996
Q 000574 390 SQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASP 469 (1414)
Q Consensus 390 ~~~~~i~~kvEthn~ps~idP~~gA~tgvgg~irDi~amGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~ 469 (1414)
+..+++++++ .+|...+||..|++++.+++||++|| ||+|++++++++|++++ .+
T Consensus 61 --~~~lv~ttD~-~~~~v~~P~~~G~~Av~~~lsDiaAm--Ga~P~~~l~~l~~p~~~--------------------~~ 115 (345)
T 2zod_A 61 --GIIWVYTVDI-ITPVVNDPYLWGAISTANALSDVYAM--GGIPVNALAISCFNNCE--------------------LD 115 (345)
T ss_dssp --TEEEEEEEEE-ECCSSSCHHHHHHHHHHHHHHHHHHT--TCEEEEEEEEEEECTTT--------------------CC
T ss_pred --CCEEEEEECC-CCCCCCCHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHCCCCC--------------------CC
T ss_conf --9679999557-88865287999999999988899984--99830334311068876--------------------88
Q ss_pred HHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCC-CCCCCCCCCEEEEECCCCC
Q ss_conf 999999999999997691990422422795311589874333774488999985607662-2489999999999915887
Q 000574 470 LQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHI-SKGEPDIGMLVVKIGGPAY 548 (1414)
Q Consensus 470 ~~i~~~~~~Gi~d~~n~~GvPivgG~t~s~~~~~~~g~~~~~~~Pl~~~~~vG~v~~~~i-~~~~a~~GD~Ivv~G~~tg 548 (1414)
.+++.++++|+.++|+++|+|+|||||. . ...|.+.++++|.+++.++ .++++++||.|+++|.
T Consensus 116 ~~~l~~~~~Gi~~~~~~~gv~lvGGdt~-~-----------~~~~~i~~t~~G~~~~~~~~~~~~a~~GD~iivtg~--- 180 (345)
T 2zod_A 116 IEIFREVIRGALDKLREAKTVLLGGHTI-D-----------DKEPKFGLSVAGICPEGKYITQSGAQVGQLLILTKP--- 180 (345)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEEE-E-----------CSSCEEEEEEEEECGGGCCCCSSCCCTTCEEEECSC---
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCEE-E-----------CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCC---
T ss_conf 9999999999999987316733089657-7-----------786744231589965754125666777986998477---
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHC--CCEEE
Q ss_conf 6664278899866189988666653357999999999999999998322599039985997838888998746--98199
Q 000574 549 RIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAE 626 (1414)
Q Consensus 549 r~GlgGa~~ss~~~~~~~~~~~~~~Vq~~dp~~ek~l~~~i~~~~el~~~~~i~ai~DigaGGL~~al~Ela~--~~G~~ 626 (1414)
.|.++...... .+.. ..... ....+. .........+......+++|+|++.|||+.+|.||++ ++|++
T Consensus 181 -lG~~~~~~~~~-~~~~----~~~~~---~~~~~~-~~~~~~~~~~~~~~~~v~a~~Dit~~GL~~~L~eia~~S~vg~~ 250 (345)
T 2zod_A 181 -IGTGILIKGLK-EGIL----KEEDI---NEAIEN-MLALNDKARNLMLSLDATACTDVTGFGLLGHAWNICKNSNIGAR 250 (345)
T ss_dssp -BCHHHHHHHHH-TTSS----CGGGG---HHHHHH-HHSCSHHHHHHHHHTTCSEEEECCTTHHHHHHHHHHHHHTCEEE
T ss_pred -CCCHHHHHHHH-HCCC----CCHHH---HHHHHH-HHCCCHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCEE
T ss_conf -75236789986-3343----31025---666776-63111567664202354144225543489999998751699727
Q ss_pred EEECCCCCCCC---------------------------CCCHHHHHC-C--CCCCEEEEEECCCCHHHHHHHHHHCCCCE
Q ss_conf 99078777878---------------------------822899960-4--34521699996789789999997739972
Q 000574 627 IDIRAIIVGDH---------------------------TLSVLEIWG-A--EYQEQDAVLVKPESRDLLQSICERERVSM 676 (1414)
Q Consensus 627 Idl~~iP~~~~---------------------------~l~p~ei~~-s--Esqer~ll~V~pe~~~~l~~i~~~~~~~~ 676 (1414)
|++++||+.+. +.+++++.+ . ++-..|+++|+|++.++++++++++++++
T Consensus 251 I~~~~iP~~~~~~~~~~~g~~p~~~~~n~~~~~~~~~~~~~~~~~~ll~DpqTSGGLL~tv~~~~~~~~~~~l~~~g~~a 330 (345)
T 2zod_A 251 IFFEKVPYYQLSENLVKKKIYPKGAIENLNFVKNYLKSNLDNWKLILLSDPVTSGGLLFTINKEKLEKIDETAKELEVNY 330 (345)
T ss_dssp ECGGGSCBCHHHHHHHHTTCCCHHHHHHHHHHTTTEECCCCHHHHHHHHCCCSSCCEEEEECGGGGGTHHHHHHHHTCCC
T ss_pred EECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCE
T ss_conf 62110676777999998389861348889999988634888899976258533673799986899999999999769795
Q ss_pred EEEEEEECCCEEEE
Q ss_conf 79999994883999
Q 000574 677 AVIGTISGEGRVVL 690 (1414)
Q Consensus 677 ~vIG~vt~~~~l~i 690 (1414)
++||+||+++++.+
T Consensus 331 ~~IG~V~~~~~~~V 344 (345)
T 2zod_A 331 WIIGETIAENVLEV 344 (345)
T ss_dssp EEEEEEESSSSEEE
T ss_pred EEEEEEECCCCCEE
T ss_conf 99999983898777
No 7
>2yyd_A Selenide, water dikinase; FULL-length selenophosphate synthetase, structural genomics, NPPSFA; 1.98A {Aquifex aeolicus} PDB: 2yye_A* 2zod_A 2zau_A
Probab=1.00 E-value=1 Score=281.62 Aligned_cols=296 Identities=14% Similarity=0.109 Sum_probs=209.9
Q ss_pred HHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 63013455400035899969525031999999872129998046430686325268753111168998764233588507
Q 000574 315 QSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLD 394 (1414)
Q Consensus 315 q~wSEHCrhk~f~~~~~~d~~~~~~~lf~~i~~~~~~~~~~~~~g~~Dnaavi~~~~~~~~~~~~~g~~a~~~~~~~~~~ 394 (1414)
-+..-.|..|.-. .-|-+++++......++++++++|||||++.. ++.
T Consensus 16 ~~~~~Gcg~K~~~-----------~~l~~~l~~~~~~~~~~v~~g~GdDaAvi~~~--------------------~~~- 63 (345)
T 2yyd_A 16 LVRSSGCAAKVGP-----------GDLQEILKGFNIYTDESTLVSIGDDAGVYEHN--------------------GII- 63 (345)
T ss_dssp GCC---------------------CCCCHHHHHSCCCCC---------CCCEEEET--------------------TEE-
T ss_pred CCCCCCCCCCCCH-----------HHHHHHHHHCCCCCCCCEEECCCCCEEEEEEC--------------------CCE-
T ss_conf 4577983045599-----------99999998467889987565589986999978--------------------991-
Q ss_pred EEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 99981113799888947889623466432200247996047786788735888889999989998889999899699999
Q 000574 395 VLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILI 474 (1414)
Q Consensus 395 i~~kvEthn~ps~idP~~gA~tgvgg~irDi~amGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~ 474 (1414)
+++++++. +|...+||.+|++++.+++||++|| ||+|++++++|+++++.. +.+++.
T Consensus 64 lv~ttD~~-~~~~~~p~~~G~~ava~~lsDlaam--Ga~P~~~l~~l~~p~~~~--------------------~~~~l~ 120 (345)
T 2yyd_A 64 WVYTVDII-TPVVNDPYLWGAISTANALSDVYAM--GGIPVNALAISCFNNCEL--------------------DIEIFR 120 (345)
T ss_dssp EEEEEEEE-CCSSSCHHHHHHHHHHHHHHHHHHT--TCEEEEEEEEEEECTTTC--------------------CHHHHH
T ss_pred EEEEECCC-CCCCCCHHHHHHHHHHHHHHHHHHC--CCCHHHHHEEEECCCCCC--------------------CHHHHH
T ss_conf 99995778-8755799999999999999999986--986687733575799889--------------------999999
Q ss_pred HHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCC-CCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 9999999997691990422422795311589874333774488999985607662-248999999999991588766642
Q 000574 475 DASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHI-SKGEPDIGMLVVKIGGPAYRIGMG 553 (1414)
Q Consensus 475 ~~~~Gi~d~~n~~GvPivgG~t~s~~~~~~~g~~~~~~~Pl~~~~~vG~v~~~~i-~~~~a~~GD~Ivv~G~~tgr~Glg 553 (1414)
++++|+.++|+++|+|+|||||. . +..|.+.++++|.+++.++ .+++++|||.|+++|. .|.+
T Consensus 121 ~i~~Gi~~~~~~~gv~lvGGdt~-~-----------~~~~~i~~t~vG~v~~~~~~~~~~a~~GD~Iivtg~----lG~~ 184 (345)
T 2yyd_A 121 EVIRGALDKLREAKTVLLGGHTI-D-----------DKEPKFGLSVAGICPEGKYITQSGAQVGQLLILTKP----IGTG 184 (345)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEE-E-----------CSSCEEEEEEEEECGGGCCCCSSCCCTTCEEEECSC----BCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECC-C-----------CCCCEEEEEEEEEECCCCEECCCCCCCCCEEEEECC----CCHH
T ss_conf 99999999999829979813746-1-----------898269999999986886442789999999999898----7579
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHC--CCEEEEEECC
Q ss_conf 78899866189988666653357999999999999999998322599039985997838888998746--9819999078
Q 000574 554 GGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRA 631 (1414)
Q Consensus 554 Ga~~ss~~~~~~~~~~~~~~Vq~~dp~~ek~l~~~i~~~~el~~~~~i~ai~DigaGGL~~al~Ela~--~~G~~Idl~~ 631 (1414)
...+....+.. ....++ ...+ .+.++.+....+..+..+++|||+|.|||+.+|.||++ ++|++|++++
T Consensus 185 -~~~~~~~~~~~----~~~~~~---~~~~-~~~~~~~~~~~~~~~~~v~a~~DiS~gGL~~~L~e~a~~sgvg~~I~~~~ 255 (345)
T 2yyd_A 185 -ILIKGLKEGIL----KEEDIN---EAIE-NMLALNDKARNLMLSLDATACTDVTGFGLLGHAWNICKNSNIGARIFFEK 255 (345)
T ss_dssp -HHHHHHHTTSS----CGGGGH---HHHH-HHHSCSHHHHHHHHHTTCSEEEECCTTHHHHHHHHHHHHHTCEEEECGGG
T ss_pred -HHHHHHHHCCC----CHHHHH---HHHH-HHHCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEHHC
T ss_conf -99999986679----878999---9999-87524599999987369769997897689999999999759819997410
Q ss_pred CCCCCCC--------------------------CCH-HH--HHCC-CCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEE
Q ss_conf 7778788--------------------------228-99--9604-3452169999678978999999773997279999
Q 000574 632 IIVGDHT--------------------------LSV-LE--IWGA-EYQEQDAVLVKPESRDLLQSICERERVSMAVIGT 681 (1414)
Q Consensus 632 iP~~~~~--------------------------l~p-~e--i~~s-Esqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~ 681 (1414)
+|+.+.. +++ ++ ++++ ++..+|+++|+|++.+++.+++++.++++++||+
T Consensus 256 iPi~~~~~~~~~~~~~~~~~~~n~~~~~~~l~~~~~~~~~~llfdp~tsGgll~~v~~~~~~~~~~~l~~~g~~a~vIG~ 335 (345)
T 2yyd_A 256 VPYYQLSENLVKKKIYPKGAIENLNFVKNYLKSNLDNWKLILLSDPVTSGGLLFTINKEKLEKIDETAKELEVNYWIIGE 335 (345)
T ss_dssp SCBCHHHHHHHHTTCCCHHHHHHHHHHTTTEECCCCHHHHHHHHSCCSSCCEEEEECGGGGGTHHHHHHHHTCCCEEEEE
T ss_pred CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 78877799999747987202456788875414668878876445864576189998289999999999976998799999
Q ss_pred EECCCEEEE
Q ss_conf 994883999
Q 000574 682 ISGEGRVVL 690 (1414)
Q Consensus 682 vt~~~~l~i 690 (1414)
|++++++.+
T Consensus 336 v~~~~~~~~ 344 (345)
T 2yyd_A 336 TIAENVLEV 344 (345)
T ss_dssp EESSSSEEE
T ss_pred EEECCCEEE
T ss_conf 964871441
No 8
>3fd5_A Selenide, water dikinase 1; selenophosphate synthetase, SELD, ATP-binding, nucleotide-binding, selenium, transferase; HET: AP2; 1.90A {Homo sapiens} PDB: 3fd6_A*
Probab=1.00 E-value=1 Score=278.71 Aligned_cols=278 Identities=13% Similarity=0.057 Sum_probs=191.6
Q ss_pred CEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCC-CEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCEE
Q ss_conf 046430686325268753111168998764233588-5079998111379988894788962346643220024799604
Q 000574 356 SVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQ-DLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFV 434 (1414)
Q Consensus 356 ~~~g~~Dnaavi~~~~~~~~~~~~~g~~a~~~~~~~-~~~i~~kvEthn~ps~idP~~gA~tgvgg~irDi~amGrGA~P 434 (1414)
..++++|||||++. .+ +..++++++++ +|...+||.+|++++++++||++|| ||+|
T Consensus 64 ~~l~~GdDaAV~~~--------------------~~~~~~lv~ttD~f-~p~~~dP~~~G~~Ava~~lsDiaAm--GA~P 120 (394)
T 3fd5_A 64 PRLGIGMDTCVIPL--------------------RHGGLSLVQTTDYI-YPIVDDPYMMGRIACANVLSDLYAM--GVTE 120 (394)
T ss_dssp CCBCTTSSSEEEEC--------------------SSTTCEEEEEEEEE-CCCSSCHHHHHHHHHHHHHHHHHHT--TCCC
T ss_pred CCCCCCCCEEEEEC--------------------CCCCCEEEEEEECC-CCCCCCHHHHHHHHHHHHHHHHHHC--CCHH
T ss_conf 66667887169861--------------------79982899994126-8867798999999999999999987--8215
Q ss_pred EE-EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCC
Q ss_conf 77-86788735888889999989998889999899699999999999999769199042242279531158987433377
Q 000574 435 VA-STAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLK 513 (1414)
Q Consensus 435 ~a-~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~Gi~d~~n~~GvPivgG~t~s~~~~~~~g~~~~~~~ 513 (1414)
++ ++++|+|++...++ ...+++.++++|++++|+++|+|+|||||.. +..
T Consensus 121 ~~~~l~~l~~p~~~~~~-----------------~~~~~l~~i~~Gi~~~~~~~gv~lvGGdT~~------------~p~ 171 (394)
T 3fd5_A 121 CDNMLMLLGVSNKMTDR-----------------ERDKVMPLIIQGFKDAAEEAGTSVTGGQTVL------------NPW 171 (394)
T ss_dssp CSEEEEEEEEETTSCHH-----------------HHHHHHHHHHHHHHHHHHHTTCCEEEEEEEE------------ESS
T ss_pred HHHHHHHEECCCCCCHH-----------------HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE------------CCC
T ss_conf 89876647658989856-----------------7899999999999999998399488114777------------687
Q ss_pred CEEEEEEEEEEECCCC-CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCC--CCCCCCCCCCCCCCHHHHHHHHH---
Q ss_conf 4488999985607662-24899999999999158876664278899866189--98866665335799999999999---
Q 000574 514 PIMFSGGIGQIDHNHI-SKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQ--NDADLDFNAVQRGDAEMAQKLYR--- 587 (1414)
Q Consensus 514 Pl~~~~~vG~v~~~~i-~~~~a~~GD~Ivv~G~~tgr~GlgGa~~ss~~~~~--~~~~~~~~~Vq~~dp~~ek~l~~--- 587 (1414)
|++.++++|.++++++ .+++++|||.|+++|. .|.++++........ ...++.. .......++..++
T Consensus 172 ~~i~~t~~G~v~~~~~l~~~~a~~GD~Iiltg~----lG~~~~~~~~~~l~~~~~~~~l~~---~~~~~~l~~~~~~~~~ 244 (394)
T 3fd5_A 172 IVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKP----LGTQVAVAVHQWLDIPEKWNKIKL---VVTQEDVELAYQEAMM 244 (394)
T ss_dssp CEEEEEEEEEECGGGCCCTTCCCTTCEEEESSC----BCHHHHHHHHHC---------------CCCHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEECCCCEECCCCCCCCCEEEEECC----CCHHHHHHHHHHHHCCCHHHHHHC---CCCHHHHHHHHHHHHH
T ss_conf 489988899985883640789999999999888----668999999998543110123303---5887899999987888
Q ss_pred ----HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHC--CCEEEEEECCCCCCCCCCCHHHHH------C----CCCCC
Q ss_conf ----9999998322599039985997838888998746--981999907877787882289996------0----43452
Q 000574 588 ----VVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIW------G----AEYQE 651 (1414)
Q Consensus 588 ----~i~~~~el~~~~~i~ai~DigaGGL~~al~Ela~--~~G~~Idl~~iP~~~~~l~p~ei~------~----sEsqe 651 (1414)
+.+...++.....+++|||+|.|||+.+|.||++ ++|++|++++||+.+......+.. + .|++.
T Consensus 245 ~~~~l~~~~~~l~~~~~v~A~~DvT~gGL~~~L~ema~aSgvg~~I~~~~iPi~~~~~~~~~~~~~~~~l~~g~d~etsG 324 (394)
T 3fd5_A 245 NMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSG 324 (394)
T ss_dssp HHHSCSHHHHHHHHHTTCCEEEECCTTHHHHHHHHHHTTCSSSEEEEEEEEEEETTHHHHHHHTTTSSCGGGTCCCCSSC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCC
T ss_conf 88788999999986469559986787689999999999659919998003788778999998655146664466724588
Q ss_pred EEEEEECCCCHHHHHHHHHHC----CCCEEEEEEEECCCE-EEEEE
Q ss_conf 169999678978999999773----997279999994883-99995
Q 000574 652 QDAVLVKPESRDLLQSICERE----RVSMAVIGTISGEGR-VVLVD 692 (1414)
Q Consensus 652 r~ll~V~pe~~~~l~~i~~~~----~~~~~vIG~vt~~~~-l~i~~ 692 (1414)
+|+++|+|++.++++++++++ ++++++||+|+++.+ +++.+
T Consensus 325 gLL~~v~~~~~~~~~~~l~~~~~~~g~~a~~IG~V~~~~~~~~l~~ 370 (394)
T 3fd5_A 325 GLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIID 370 (394)
T ss_dssp CEEEEECHHHHHHHHHHHHCC---CCCCCEEEEEEEESSSCEEEEE
T ss_pred CEEEEECHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCEEEEEE
T ss_conf 5899987899999999997162237997799999982896489987
No 9
>3ac6_A Phosphoribosylformylglycinamidine synthase 2; purine metabolism, ATP-binding, ligase, nucleotide-binding, biosynthesis; HET: ADP; 2.35A {Thermus thermophilus} PDB: 3viu_A*
Probab=1.00 E-value=1 Score=277.20 Aligned_cols=286 Identities=14% Similarity=0.116 Sum_probs=151.7
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 76838999845988137499985479988889999999999998510111476541011123322334478871799999
Q 000574 790 TLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYD 869 (1414)
Q Consensus 790 p~~DaAVi~~~~~~~~gia~s~g~~p~~~~~dP~~ga~~AV~eai~niaa~Ga~pl~~v~~s~n~~~p~~~~~~~~~l~~ 869 (1414)
+++||||+++.. ...++++++.+++...++||.+|+.+|+.++|||+||||+|++.+ .+++|+.+.. |.....+.+
T Consensus 65 ~gdDaavi~~~~--~~~l~~~ve~h~~p~~~~P~~gg~~~v~~~l~Di~amGA~P~~~l-~~l~~~~~~~-~~~~~~l~~ 140 (725)
T 3ac6_A 65 PGENAGVVRVGE--GWAVAFKIESHNHPSAVEPFQGAATGVGGILRDIMSMGARPIALL-DSLRFGPPEE-ARSRYLLKG 140 (725)
T ss_dssp TTSSSEEEEEET--TEEEEEEEEECHHHHHHCHHHHHHHHHHHHHHHHHHTTCEEEEEE-EEEEESCTTS-HHHHHHHHH
T ss_pred CCCCEEEEEECC--CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHE-EEEECCCCCC-CCHHHHHHH
T ss_conf 388568999379--819999947679976638377899987666510100587657455-6687279987-328999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECC--CCCCC
Q ss_conf 9999999999929810234432223222699300008738999999818999313888667999189999918--99666
Q 000574 870 AATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLA--KGKRR 947 (1414)
Q Consensus 870 a~~gl~dac~~lgipivgGkdSls~~~~~~~~~i~~ppTlvisa~G~v~d~~~~itp~~k~~Gd~~li~v~lg--~~~~~ 947 (1414)
+++|++++|+++|+|++||+++++..+ ...|++.++++|.++. .+.+ ...+++|| .|+++ | .+...
T Consensus 141 ~~~Gi~~~~~~~G~~lvgG~t~~~~~~-------~~~~~i~~~~vG~v~~-~~~~-~~~a~~GD-~ii~~--G~~~g~~G 208 (725)
T 3ac6_A 141 VVSGIAFYGNAIGVPTVGGDLYFHEGY-------RENPLVNAMCLGLLRE-EHLK-RSRASLGR-PIYYA--GAKTGRDG 208 (725)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEEECGGG-------SSSCEEEEEEEEEEEG-GGCC-CBCCCTTC-EEEEE--ESCBCSCC
T ss_pred HHHHHHHHHHHHCCCEEEEEEEEECCC-------CCCCEEEEEEEEEECH-HHCC-CCCCCCCC-EEEEE--CCCCCCCC
T ss_conf 999999998986897668999972786-------8982299999999670-4415-67899999-99998--88889886
Q ss_pred CCHHHHHHH-HHH-CCCCCCCC--CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 416899999-620-19999999--99689999999999987245821998189883699989978518728999808999
Q 000574 948 LGGSALAQV-FDQ-VGNESPDL--EDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEG 1023 (1414)
Q Consensus 948 LGGS~l~~~-~~~-~g~~~P~v--~d~~~lk~~~~~v~~li~~glV~A~hDvSdGGL~~aL~EMa~ag~~G~~Idl~~~~ 1023 (1414)
+||+.++.. +.. .....|.+ .++...+++.+.+.++++.+.|+|+||+|.|||+.+|.|||.++++|++|+++.++
T Consensus 209 ~gg~~~~~~~~~~~~~~~~p~v~~g~~~~e~~~~~~~~~l~~~~~i~a~~Di~~gGL~~~l~ema~~sg~g~~i~l~~vP 288 (725)
T 3ac6_A 209 IGGAAFASRELKEEKAEDRPAVQVGDPFLGKLLMEATLEAIELDLVEGVQDMGAAGLTSSLSELAHKSGLGVELHLDLVP 288 (725)
T ss_dssp C----------------------CCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTHHHHHHHHHHHHTTSEEEEEGGGSC
T ss_pred CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 26999998760232136775344488888999999999987348734888679975999999999855974999835677
Q ss_pred -----CCHHHHHCCCCCCE-EEEEECCCHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCEEEEECCHHHHHH
Q ss_conf -----84577760566434-999936899999999988399889999980899199999998988503899999
Q 000574 1024 -----NSLFQTLFAEELGL-VLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRD 1091 (1414)
Q Consensus 1024 -----~~~~~~LFsEs~G~-Vi~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i~~~g~~i~~~~l~~L~~ 1091 (1414)
.++.+.+|+|+++. +++|++++.+++++.+++.++++++||+|++++.+.+..+|+.+++.+++.|..
T Consensus 289 ~~~~~~~~~e~~~se~q~~ll~~v~~~~~~~~~~~~~~~~~~~~vIG~vt~~~~~~~~~~g~~~~d~~~~~l~~ 362 (725)
T 3ac6_A 289 TREEGMTPEELLLSESQERMVLVPKEGKEKALEEVFGRWGLDCVPVARTIPERVFRVLFRGEVVAEVPTEALAE 362 (725)
T ss_dssp BSSSSCCHHHHHHCCCSSEEEEEECTTCHHHHHHHHHHTTCCEEEEEEEESSSEEEEEETTEEEEEEEHHHHHS
T ss_pred CCCCCCCHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEECCCEEEECCHHHHHC
T ss_conf 77678889999862885738999875778999999997599879999998388699997992798757899706
No 10
>3u0o_A Selenide, water dikinase; ATP binding protein, selenophosphate synthesis, transferase; 2.25A {Escherichia coli}
Probab=1.00 E-value=1 Score=276.48 Aligned_cols=292 Identities=14% Similarity=0.098 Sum_probs=205.7
Q ss_pred HHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH-HCCCCCCCEEEE--CCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6301345540003589996952503199999987-212999804643--0686325268753111168998764233588
Q 000574 315 QSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKST-LQANPNNSVIGF--KDNSSAIKGFPVKQLRPVQPGSRCQLSESSQ 391 (1414)
Q Consensus 315 q~wSEHCrhk~f~~~~~~d~~~~~~~lf~~i~~~-~~~~~~~~~~g~--~Dnaavi~~~~~~~~~~~~~g~~a~~~~~~~ 391 (1414)
-++..||..|.-... |-+++... .....+++++|+ +|||||++. .+
T Consensus 11 ~~~~~gc~~K~~~~~-----------l~~~l~~~~~~~~~~~v~vg~~~gdDaavi~~--------------------~~ 59 (347)
T 3u0o_A 11 YSHGAGCGCKISPKV-----------LETILHSEQAKFVDPNLLVGNETRDDAAVYDL--------------------GN 59 (347)
T ss_dssp -----------------------------CCCCSCCSSCCCSSBCSCSSCCSSEEEEC--------------------TT
T ss_pred CCCCCCCEEECCHHH-----------HHHHHHHCCCCCCCCCEEECCCCCCCEEEEEE--------------------CC
T ss_conf 768898430069999-----------99999852777899875878999985599973--------------------79
Q ss_pred CEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 50799981113799888947889623466432200247996047786788735888889999989998889999899699
Q 000574 392 DLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQ 471 (1414)
Q Consensus 392 ~~~i~~kvEthn~ps~idP~~gA~tgvgg~irDi~amGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~ 471 (1414)
+..+++++++ ++|...+||.+|++++++++||++|| ||+|++++++|+|+++. .+.+
T Consensus 60 ~~~lv~ttD~-~~~~~~~p~~~G~~ava~~lsDiaam--GA~P~~~l~~l~~p~~~--------------------~~~~ 116 (347)
T 3u0o_A 60 GTSVISTTDF-FMPIVDNPFDFGRIAATNAISDIFAM--GGKPIMAIAILGWPINK--------------------LSPE 116 (347)
T ss_dssp SEEEEEEEEE-ESCCSSCHHHHHHHHHHHHHHHHHHT--TCEEEEEEEEEEECTTT--------------------SCHH
T ss_pred CCEEEEEECC-CCCCCCCHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHEECCCCC--------------------CCHH
T ss_conf 9589999457-88776699999999999999999985--98349988642089877--------------------9999
Q ss_pred HHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCC-CCCCCCCCCEEEEECCCCCCC
Q ss_conf 9999999999997691990422422795311589874333774488999985607662-248999999999991588766
Q 000574 472 ILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHI-SKGEPDIGMLVVKIGGPAYRI 550 (1414)
Q Consensus 472 i~~~~~~Gi~d~~n~~GvPivgG~t~s~~~~~~~g~~~~~~~Pl~~~~~vG~v~~~~i-~~~~a~~GD~Ivv~G~~tgr~ 550 (1414)
++.++++|++++|+++|+|+|||||.. +..+++.++++|.+++.++ .+++++|||.|+++|. .
T Consensus 117 ~l~~i~~Gi~~~~~~~gv~lvGGdt~~------------~~~~~~~~t~vG~v~~~~~~~~~~a~~GD~iiltg~----~ 180 (347)
T 3u0o_A 117 IAREVTEGGRYACRQAGIALAGGHSID------------APEPIFGLAVTGIVPTERVKKNSTAQAGCKLFLTKP----L 180 (347)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEEE------------CSSCEEEEEEEEEEEGGGCCCSSCCCTTCEEEESSC----B
T ss_pred HHHHHHHHHHHHHHHCCCEEECCEECC------------CCCCEEEEEEEEEECCCCEECCCCCCCCCEEEEECC----C
T ss_conf 999999999999998699798243222------------898279899999987765531789999999999688----6
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHC--CCEEEEE
Q ss_conf 64278899866189988666653357999999999999999998322599039985997838888998746--9819999
Q 000574 551 GMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEID 628 (1414)
Q Consensus 551 GlgGa~~ss~~~~~~~~~~~~~~Vq~~dp~~ek~l~~~i~~~~el~~~~~i~ai~DigaGGL~~al~Ela~--~~G~~Id 628 (1414)
|.+..+ +....+.. ..... +...+. +.++.+...++.....+++|||+|.|||+.+|.||+. ++|++|+
T Consensus 181 G~~~~~-~~~~~~~~----~~~~~---~~~~~~-~~~~~~~~~~l~~~~~v~a~~DiT~gGL~~~L~e~a~~sgvg~~I~ 251 (347)
T 3u0o_A 181 GIGVLT-TAEKKSLL----KPEHQ---GLATEV-MCRMNIAGASFANIEGVKAMTDVTGFGLLGHLSEMCQGAGVQARVD 251 (347)
T ss_dssp CHHHHH-HHHHTTCC----CGGGT---THHHHH-HHSCCTHHHHHTTCTTEEEEEECCSSHHHHHHHHHHHHHTEEEEEE
T ss_pred CHHHHH-HHHHHCCC----CHHHH---HHHHHH-HHHHCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 178999-99985768----86779---999999-9732458999985089779871898679999999998769809995
Q ss_pred ECCCCCCCCC--------------------------CCHHHH--HCC-CCCCEEEEEECCCCHHHHHHHHHHCCCCEEEE
Q ss_conf 0787778788--------------------------228999--604-34521699996789789999997739972799
Q 000574 629 IRAIIVGDHT--------------------------LSVLEI--WGA-EYQEQDAVLVKPESRDLLQSICERERVSMAVI 679 (1414)
Q Consensus 629 l~~iP~~~~~--------------------------l~p~ei--~~s-Esqer~ll~V~pe~~~~l~~i~~~~~~~~~vI 679 (1414)
++++|+.+.. ++++.. +++ ++..+|+++|+|++.+++.++++++++++++|
T Consensus 252 ~~~iPi~~~~~~~~~~g~~~~~~~~n~~~~~~~~~~l~~~~~~ll~dp~~sggll~~v~~~~~~~~~~~l~~~g~~a~~I 331 (347)
T 3u0o_A 252 YEAIPKLPGVEEYIKLGAVPGGTERNFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKATAAEFGIELTAI 331 (347)
T ss_dssp TTTSCBCTTHHHHHTTCCCCHHHHHHHHHHGGGBCCCCHHHHHHHTCCCTTCCEEEEECHHHHHHHHHHHHHTTCCCCCC
T ss_pred ECCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEE
T ss_conf 23478887899999717987033443555301122332677875138435760899984899999999999769974999
Q ss_pred EEEECC
Q ss_conf 999948
Q 000574 680 GTISGE 685 (1414)
Q Consensus 680 G~vt~~ 685 (1414)
|+|++.
T Consensus 332 G~V~~~ 337 (347)
T 3u0o_A 332 GELVPA 337 (347)
T ss_dssp EEEEEC
T ss_pred EEEEEC
T ss_conf 999606
Done!