Query 000576
Match_columns 1412
No_of_seqs 877 out of 5205
Neff 7.7
Searched_HMMs 46136
Date Mon Apr 1 19:58:41 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000576.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000576hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 2E-251 3E-256 2314.0 98.1 1327 37-1412 12-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 2E-233 5E-238 2313.7 144.9 1394 17-1412 18-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 1E-183 3E-188 1844.1 134.8 1261 95-1407 3-1389(1394)
4 KOG0061 Transporter, ABC super 100.0 2E-95 4E-100 910.9 57.0 575 811-1411 22-611 (613)
5 TIGR00955 3a01204 The Eye Pigm 100.0 1.6E-94 3.4E-99 914.9 60.7 565 838-1412 36-617 (617)
6 PLN03211 ABC transporter G-25; 100.0 5.2E-94 1.1E-98 907.8 62.4 579 812-1409 37-659 (659)
7 TIGR00956 3a01205 Pleiotropic 100.0 2.9E-91 6.2E-96 945.0 62.3 561 838-1409 72-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 2.8E-90 6.2E-95 929.7 59.5 562 838-1408 176-789 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 6.5E-84 1.4E-88 808.1 40.5 563 838-1410 126-732 (1391)
10 PLN03211 ABC transporter G-25; 100.0 3E-76 6.5E-81 746.1 63.8 609 115-776 35-658 (659)
11 TIGR00955 3a01204 The Eye Pigm 100.0 1.4E-76 3.1E-81 751.0 59.0 569 163-775 35-612 (617)
12 KOG0061 Transporter, ABC super 100.0 3E-76 6.6E-81 738.1 58.1 581 116-776 22-608 (613)
13 KOG0054 Multidrug resistance-a 100.0 5.4E-76 1.2E-80 758.5 54.6 751 166-1052 534-1357(1381)
14 KOG0055 Multidrug/pheromone ex 100.0 1.6E-74 3.5E-79 726.7 57.8 806 80-1052 315-1208(1228)
15 TIGR01257 rim_protein retinal- 100.0 1.6E-69 3.5E-74 726.8 71.4 225 813-1064 1936-2162(2272)
16 PLN03130 ABC transporter C fam 100.0 7.3E-69 1.6E-73 733.5 58.7 211 813-1052 1236-1456(1622)
17 PLN03232 ABC transporter C fam 100.0 5.4E-68 1.2E-72 726.1 58.7 211 813-1052 1233-1453(1495)
18 TIGR00957 MRP_assoc_pro multi 100.0 6.2E-67 1.3E-71 716.6 61.5 211 813-1052 1283-1503(1522)
19 COG1123 ATPase components of v 100.0 7.7E-66 1.7E-70 610.7 51.6 474 166-1052 22-514 (539)
20 PTZ00265 multidrug resistance 100.0 7.8E-65 1.7E-69 687.7 65.3 217 813-1052 1164-1447(1466)
21 PTZ00243 ABC transporter; Prov 100.0 1.2E-64 2.6E-69 691.5 58.8 211 813-1052 1307-1528(1560)
22 PRK13549 xylose transporter AT 100.0 1.1E-64 2.4E-69 631.8 48.8 463 163-1054 15-491 (506)
23 PRK09700 D-allose transporter 100.0 8.6E-65 1.9E-69 633.8 46.8 461 163-1052 15-493 (510)
24 PRK10762 D-ribose transporter 100.0 2E-64 4.4E-69 628.6 48.1 453 163-1054 14-481 (501)
25 TIGR01271 CFTR_protein cystic 100.0 1E-63 2.2E-68 682.6 59.0 210 813-1052 1216-1435(1490)
26 PRK10261 glutathione transport 100.0 1.2E-63 2.7E-68 633.6 50.9 490 166-1052 29-548 (623)
27 TIGR03269 met_CoM_red_A2 methy 100.0 1.6E-63 3.5E-68 623.7 50.4 449 162-1052 9-512 (520)
28 PRK15439 autoinducer 2 ABC tra 100.0 1.3E-63 2.8E-68 621.7 48.9 455 164-1053 22-488 (510)
29 PRK15134 microcin C ABC transp 100.0 1.7E-63 3.6E-68 624.5 49.3 464 166-1052 22-510 (529)
30 TIGR02633 xylG D-xylose ABC tr 100.0 3.4E-63 7.3E-68 618.4 49.6 463 162-1052 10-487 (500)
31 PRK11288 araG L-arabinose tran 100.0 5E-63 1.1E-67 616.1 48.6 453 164-1054 15-482 (501)
32 PRK10982 galactose/methyl gala 100.0 3.2E-62 7E-67 607.8 47.7 457 159-1053 4-476 (491)
33 PRK10938 putative molybdenum t 100.0 4.3E-61 9.2E-66 598.1 42.7 451 163-1050 13-485 (490)
34 COG4172 ABC-type uncharacteriz 100.0 1.2E-59 2.6E-64 521.9 45.9 471 164-1052 21-511 (534)
35 PRK11819 putative ABC transpor 100.0 5.4E-59 1.2E-63 585.5 49.7 497 165-1051 19-527 (556)
36 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2.4E-58 5.2E-63 579.7 50.4 497 165-1051 17-525 (552)
37 PRK15064 ABC transporter ATP-b 100.0 2.5E-58 5.5E-63 577.8 49.9 499 163-1052 11-520 (530)
38 PRK10636 putative ABC transpor 100.0 4.4E-56 9.5E-61 564.6 48.1 197 814-1052 312-512 (638)
39 COG1129 MglA ABC-type sugar tr 100.0 9.9E-56 2.2E-60 521.7 45.0 459 156-1051 11-484 (500)
40 PRK13409 putative ATPase RIL; 100.0 5.2E-56 1.1E-60 555.4 43.8 211 814-1066 340-554 (590)
41 PRK11147 ABC transporter ATPas 100.0 2.5E-55 5.5E-60 559.4 50.6 201 814-1051 319-522 (635)
42 COG0488 Uup ATPase components 100.0 2.9E-53 6.3E-58 515.7 45.4 504 159-1051 9-519 (530)
43 PLN03073 ABC transporter F fam 100.0 3E-53 6.5E-58 538.9 45.2 200 814-1052 508-709 (718)
44 COG3845 ABC-type uncharacteriz 100.0 4.4E-52 9.5E-57 478.7 42.2 466 157-1054 8-489 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 1.4E-44 3.1E-49 376.0 20.4 229 157-436 6-238 (240)
46 KOG0927 Predicted transporter 100.0 3.7E-43 8.1E-48 404.9 29.1 203 812-1052 387-591 (614)
47 COG1126 GlnQ ABC-type polar am 100.0 7.6E-43 1.7E-47 363.0 22.9 215 814-1052 2-220 (240)
48 COG1125 OpuBA ABC-type proline 100.0 4.1E-42 8.9E-47 363.5 20.3 218 157-415 5-225 (309)
49 COG1135 AbcC ABC-type metal io 100.0 4.3E-42 9.2E-47 375.0 20.9 223 165-438 18-246 (339)
50 COG3839 MalK ABC-type sugar tr 100.0 9.5E-42 2.1E-46 389.0 21.1 227 158-435 8-235 (338)
51 COG1131 CcmA ABC-type multidru 100.0 3E-41 6.5E-46 388.6 25.0 224 814-1065 4-230 (293)
52 COG3842 PotA ABC-type spermidi 100.0 1.4E-41 2.9E-46 389.8 18.9 230 158-437 10-240 (352)
53 COG1118 CysA ABC-type sulfate/ 100.0 2.8E-41 6.1E-46 367.3 20.3 230 158-436 7-240 (345)
54 COG1127 Ttg2A ABC-type transpo 100.0 1.1E-40 2.3E-45 352.4 23.0 232 813-1068 7-250 (263)
55 COG1120 FepC ABC-type cobalami 100.0 2E-41 4.4E-46 372.5 17.7 215 161-414 10-227 (258)
56 COG1135 AbcC ABC-type metal io 100.0 1.1E-40 2.4E-45 364.0 21.2 218 815-1052 2-226 (339)
57 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3.2E-40 6.9E-45 360.9 23.6 217 814-1054 4-224 (254)
58 COG1127 Ttg2A ABC-type transpo 100.0 2E-40 4.3E-45 350.4 20.8 216 159-415 14-235 (263)
59 COG1131 CcmA ABC-type multidru 100.0 3.3E-40 7.2E-45 379.9 24.3 219 157-418 8-229 (293)
60 TIGR01257 rim_protein retinal- 100.0 1.3E-35 2.7E-40 400.7 72.1 216 813-1052 927-1144(2272)
61 COG1116 TauB ABC-type nitrate/ 100.0 2.5E-40 5.5E-45 356.0 20.7 198 160-402 10-207 (248)
62 COG1120 FepC ABC-type cobalami 100.0 2.9E-40 6.2E-45 363.4 20.8 218 814-1053 2-224 (258)
63 COG4555 NatA ABC-type Na+ tran 100.0 1.4E-40 2.9E-45 340.5 16.9 214 815-1052 2-217 (245)
64 COG3638 ABC-type phosphate/pho 100.0 4.3E-40 9.4E-45 346.8 20.0 220 814-1054 3-234 (258)
65 COG1136 SalX ABC-type antimicr 100.0 1E-39 2.2E-44 352.3 22.9 209 815-1045 2-219 (226)
66 COG1116 TauB ABC-type nitrate/ 100.0 7.8E-40 1.7E-44 352.3 21.9 204 814-1043 3-207 (248)
67 KOG0058 Peptide exporter, ABC 100.0 6.1E-40 1.3E-44 393.9 21.8 226 117-415 463-691 (716)
68 COG1125 OpuBA ABC-type proline 100.0 7.4E-40 1.6E-44 346.4 19.7 213 815-1052 2-220 (309)
69 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.3E-39 2.8E-44 356.1 21.4 208 167-415 18-227 (254)
70 COG4555 NatA ABC-type Na+ tran 100.0 7.1E-40 1.5E-44 335.2 17.0 213 159-415 7-222 (245)
71 COG1117 PstB ABC-type phosphat 100.0 7E-40 1.5E-44 338.7 17.0 227 160-434 14-248 (253)
72 COG3638 ABC-type phosphate/pho 100.0 1.8E-39 3.9E-44 342.2 19.7 217 164-415 15-237 (258)
73 COG2884 FtsE Predicted ATPase 100.0 6E-39 1.3E-43 326.1 19.7 213 815-1052 2-221 (223)
74 COG1118 CysA ABC-type sulfate/ 100.0 3.5E-39 7.7E-44 350.9 19.1 216 815-1053 3-223 (345)
75 COG1117 PstB ABC-type phosphat 100.0 1E-38 2.2E-43 330.2 19.5 218 813-1052 6-232 (253)
76 COG1136 SalX ABC-type antimicr 100.0 2.3E-38 4.9E-43 341.8 22.4 196 166-404 18-220 (226)
77 COG3839 MalK ABC-type sugar tr 100.0 1.7E-38 3.6E-43 362.5 22.1 214 814-1052 3-218 (338)
78 PRK13537 nodulation ABC transp 100.0 5.6E-38 1.2E-42 365.1 26.7 215 813-1052 6-222 (306)
79 PRK11650 ugpC glycerol-3-phosp 100.0 3.5E-38 7.7E-43 372.5 24.5 208 164-414 15-223 (356)
80 COG2274 SunT ABC-type bacterio 100.0 2.4E-38 5.2E-43 397.3 24.0 258 79-415 436-696 (709)
81 TIGR03258 PhnT 2-aminoethylpho 100.0 4.9E-38 1.1E-42 371.2 24.8 209 164-414 16-227 (362)
82 PRK11432 fbpC ferric transport 100.0 5.7E-38 1.2E-42 369.6 24.7 208 164-414 17-225 (351)
83 TIGR03265 PhnT2 putative 2-ami 100.0 5.5E-38 1.2E-42 370.5 24.6 209 164-415 15-224 (353)
84 COG3842 PotA ABC-type spermidi 100.0 2.9E-38 6.2E-43 362.4 20.5 217 813-1053 4-222 (352)
85 PRK13537 nodulation ABC transp 100.0 1.2E-37 2.5E-42 362.5 24.4 208 164-415 18-227 (306)
86 TIGR02314 ABC_MetN D-methionin 100.0 1.6E-37 3.5E-42 363.8 25.0 206 166-414 18-229 (343)
87 PRK09452 potA putrescine/sperm 100.0 1.6E-37 3.5E-42 368.1 24.8 219 165-434 26-245 (375)
88 TIGR01186 proV glycine betaine 100.0 2.2E-37 4.8E-42 364.4 25.6 211 162-415 2-219 (363)
89 COG1122 CbiO ABC-type cobalt t 100.0 1E-37 2.3E-42 344.1 21.4 207 166-415 17-228 (235)
90 TIGR02314 ABC_MetN D-methionin 100.0 3E-37 6.5E-42 361.5 26.3 217 815-1052 2-225 (343)
91 cd03261 ABC_Org_Solvent_Resist 100.0 3.4E-37 7.3E-42 347.1 25.1 214 815-1052 1-221 (235)
92 PRK13536 nodulation factor exp 100.0 6.2E-37 1.3E-41 359.7 27.7 215 813-1052 40-256 (340)
93 KOG0057 Mitochondrial Fe/S clu 100.0 2.6E-37 5.6E-42 358.7 22.9 229 111-415 343-574 (591)
94 COG2884 FtsE Predicted ATPase 100.0 2.6E-37 5.7E-42 314.2 20.0 202 164-409 13-220 (223)
95 COG0410 LivF ABC-type branched 100.0 3.3E-37 7.1E-42 326.2 21.4 214 158-415 8-226 (237)
96 PRK10851 sulfate/thiosulfate t 100.0 3.9E-37 8.4E-42 363.3 24.5 212 164-414 13-225 (353)
97 COG0411 LivG ABC-type branched 100.0 1.1E-37 2.4E-42 332.3 17.8 229 156-415 7-239 (250)
98 PRK11650 ugpC glycerol-3-phosp 100.0 5.4E-37 1.2E-41 362.5 25.6 215 814-1052 3-219 (356)
99 TIGR03265 PhnT2 putative 2-ami 100.0 5.8E-37 1.3E-41 361.8 25.6 214 814-1052 4-219 (353)
100 cd03261 ABC_Org_Solvent_Resist 100.0 5.2E-37 1.1E-41 345.5 23.9 210 163-414 10-225 (235)
101 COG3840 ThiQ ABC-type thiamine 100.0 2.5E-37 5.4E-42 311.2 18.6 201 171-414 17-218 (231)
102 COG1137 YhbG ABC-type (unclass 100.0 8E-38 1.7E-42 319.8 15.1 217 814-1053 4-224 (243)
103 KOG0058 Peptide exporter, ABC 100.0 5.8E-36 1.3E-40 359.8 33.6 215 812-1051 463-685 (716)
104 PRK11432 fbpC ferric transport 100.0 8.8E-37 1.9E-41 359.5 26.1 214 814-1052 6-221 (351)
105 COG1124 DppF ABC-type dipeptid 100.0 3.1E-37 6.8E-42 328.3 19.9 205 167-415 21-231 (252)
106 PRK11607 potG putrescine trans 100.0 6.4E-37 1.4E-41 363.7 24.9 207 165-414 31-238 (377)
107 KOG0062 ATPase component of AB 100.0 4.5E-37 9.8E-42 352.9 22.5 205 811-1051 359-563 (582)
108 TIGR03258 PhnT 2-aminoethylpho 100.0 9.6E-37 2.1E-41 360.2 25.5 214 814-1052 5-223 (362)
109 PRK11000 maltose/maltodextrin 100.0 7.4E-37 1.6E-41 363.8 24.6 208 164-414 14-222 (369)
110 cd03259 ABC_Carb_Solutes_like 100.0 1.2E-36 2.6E-41 337.4 24.4 211 815-1050 1-213 (213)
111 TIGR01188 drrA daunorubicin re 100.0 9.3E-37 2E-41 355.3 24.3 208 164-415 4-213 (302)
112 PRK13536 nodulation factor exp 100.0 1E-36 2.2E-41 357.9 24.7 211 161-415 49-261 (340)
113 COG1137 YhbG ABC-type (unclass 100.0 1.1E-37 2.3E-42 319.0 14.0 216 158-415 9-228 (243)
114 TIGR00960 3a0501s02 Type II (G 100.0 1.4E-36 2.9E-41 337.7 23.6 208 815-1045 2-215 (216)
115 PRK10851 sulfate/thiosulfate t 100.0 1.8E-36 3.8E-41 357.7 25.4 217 814-1052 2-221 (353)
116 cd03269 ABC_putative_ATPase Th 100.0 2.3E-36 5E-41 334.3 24.7 210 815-1050 1-210 (210)
117 TIGR01288 nodI ATP-binding ABC 100.0 2.5E-36 5.5E-41 351.8 26.1 214 814-1052 4-219 (303)
118 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.4E-36 7.5E-41 335.4 25.7 216 815-1052 1-218 (220)
119 PRK09452 potA putrescine/sperm 100.0 3E-36 6.4E-41 357.3 26.2 214 814-1052 14-229 (375)
120 cd03265 ABC_DrrA DrrA is the A 100.0 3.6E-36 7.7E-41 335.3 25.1 213 815-1052 1-216 (220)
121 COG1124 DppF ABC-type dipeptid 100.0 1.7E-36 3.7E-41 322.8 21.3 217 814-1053 3-227 (252)
122 cd03301 ABC_MalK_N The N-termi 100.0 3.8E-36 8.3E-41 333.4 25.1 211 815-1050 1-213 (213)
123 COG3840 ThiQ ABC-type thiamine 100.0 9.6E-37 2.1E-41 307.0 18.1 211 815-1052 2-214 (231)
124 COG2274 SunT ABC-type bacterio 100.0 3.9E-35 8.5E-40 368.4 37.0 218 807-1052 464-691 (709)
125 cd03259 ABC_Carb_Solutes_like 100.0 2.2E-36 4.7E-41 335.3 22.7 204 162-408 9-213 (213)
126 COG4559 ABC-type hemin transpo 100.0 1.6E-36 3.4E-41 313.0 19.6 209 164-414 12-229 (259)
127 TIGR01188 drrA daunorubicin re 100.0 2.7E-36 5.8E-41 351.5 24.0 201 840-1052 6-208 (302)
128 cd03265 ABC_DrrA DrrA is the A 100.0 3E-36 6.6E-41 335.8 23.3 209 162-413 9-219 (220)
129 cd03234 ABCG_White The White s 100.0 5.6E-36 1.2E-40 335.0 25.5 221 815-1050 4-226 (226)
130 PRK11607 potG putrescine trans 100.0 6.2E-36 1.3E-40 355.3 27.2 215 813-1052 18-234 (377)
131 PRK11153 metN DL-methionine tr 100.0 4.8E-36 1E-40 354.1 26.2 217 815-1052 2-225 (343)
132 cd03219 ABC_Mj1267_LivG_branch 100.0 4.9E-36 1.1E-40 338.0 25.1 216 815-1052 1-227 (236)
133 PRK11153 metN DL-methionine tr 100.0 3.6E-36 7.7E-41 355.2 25.0 207 165-414 17-229 (343)
134 cd03266 ABC_NatA_sodium_export 100.0 4.8E-36 1E-40 333.9 24.5 215 815-1050 2-218 (218)
135 KOG0056 Heavy metal exporter H 100.0 2.9E-37 6.2E-42 348.2 14.8 250 86-415 509-761 (790)
136 cd03218 ABC_YhbG The ABC trans 100.0 5E-36 1.1E-40 337.0 24.9 213 815-1052 1-217 (232)
137 cd03296 ABC_CysA_sulfate_impor 100.0 7.3E-36 1.6E-40 337.0 26.3 217 814-1052 2-221 (239)
138 COG1122 CbiO ABC-type cobalt t 100.0 2E-36 4.4E-41 333.9 21.2 215 814-1052 3-223 (235)
139 TIGR01288 nodI ATP-binding ABC 100.0 3.5E-36 7.6E-41 350.6 24.3 208 164-415 15-224 (303)
140 PRK11174 cysteine/glutathione 100.0 3.7E-36 8E-41 383.3 26.5 207 166-415 363-572 (588)
141 cd03268 ABC_BcrA_bacitracin_re 100.0 4.9E-36 1.1E-40 331.3 23.6 207 815-1050 1-208 (208)
142 PRK13637 cbiO cobalt transport 100.0 5.6E-36 1.2E-40 346.0 25.2 218 166-426 20-248 (287)
143 PRK11000 maltose/maltodextrin 100.0 5.4E-36 1.2E-40 356.4 25.7 214 814-1052 3-218 (369)
144 COG4988 CydD ABC-type transpor 100.0 3.4E-36 7.3E-41 356.1 23.6 206 167-415 335-543 (559)
145 cd03260 ABC_PstB_phosphate_tra 100.0 5.3E-36 1.1E-40 335.6 23.9 214 815-1052 1-224 (227)
146 cd03294 ABC_Pro_Gly_Bertaine T 100.0 6.8E-36 1.5E-40 342.5 25.2 215 157-414 28-249 (269)
147 cd03219 ABC_Mj1267_LivG_branch 100.0 5.2E-36 1.1E-40 337.8 23.7 218 163-414 10-231 (236)
148 TIGR03522 GldA_ABC_ATP gliding 100.0 7.5E-36 1.6E-40 347.3 25.6 213 814-1052 2-216 (301)
149 cd03296 ABC_CysA_sulfate_impor 100.0 5.8E-36 1.3E-40 337.8 23.7 211 165-414 14-225 (239)
150 PRK09536 btuD corrinoid ABC tr 100.0 6.2E-36 1.3E-40 356.2 24.9 218 814-1053 3-224 (402)
151 cd03218 ABC_YhbG The ABC trans 100.0 6.6E-36 1.4E-40 336.1 23.7 210 161-414 8-221 (232)
152 cd03258 ABC_MetN_methionine_tr 100.0 8.3E-36 1.8E-40 335.4 24.3 217 815-1052 2-225 (233)
153 PRK13643 cbiO cobalt transport 100.0 1.5E-35 3.3E-40 342.6 27.0 224 167-434 20-255 (288)
154 TIGR03522 GldA_ABC_ATP gliding 100.0 6.4E-36 1.4E-40 347.9 23.7 209 162-415 11-221 (301)
155 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 7.1E-36 1.5E-40 332.5 23.1 209 815-1045 1-217 (218)
156 cd03258 ABC_MetN_methionine_tr 100.0 8.6E-36 1.9E-40 335.3 24.0 205 167-414 19-229 (233)
157 cd03256 ABC_PhnC_transporter A 100.0 7.5E-36 1.6E-40 337.7 23.5 217 815-1052 1-229 (241)
158 cd03301 ABC_MalK_N The N-termi 100.0 8.2E-36 1.8E-40 330.8 23.2 203 163-408 10-213 (213)
159 PRK09493 glnQ glutamine ABC tr 100.0 1.6E-35 3.4E-40 334.6 25.9 214 815-1052 2-220 (240)
160 cd03263 ABC_subfamily_A The AB 100.0 1.1E-35 2.4E-40 331.4 24.0 214 815-1052 1-216 (220)
161 PRK11264 putative amino-acid A 100.0 1.8E-35 3.8E-40 336.4 25.8 215 814-1052 3-228 (250)
162 PRK11629 lolD lipoprotein tran 100.0 2.6E-35 5.7E-40 331.2 26.7 217 814-1052 5-229 (233)
163 cd03226 ABC_cobalt_CbiO_domain 100.0 5.7E-36 1.2E-40 329.9 20.9 203 817-1047 2-205 (205)
164 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.3E-35 2.8E-40 330.7 23.7 200 166-410 17-218 (220)
165 cd03224 ABC_TM1139_LivF_branch 100.0 1.1E-35 2.4E-40 332.0 23.2 207 162-414 9-220 (222)
166 COG1132 MdlB ABC-type multidru 100.0 6.2E-36 1.3E-40 379.1 23.9 209 165-415 341-552 (567)
167 TIGR02673 FtsE cell division A 100.0 1.4E-35 3.1E-40 329.1 23.9 206 815-1043 2-213 (214)
168 cd03260 ABC_PstB_phosphate_tra 100.0 7.7E-36 1.7E-40 334.3 21.8 208 162-412 9-226 (227)
169 TIGR01186 proV glycine betaine 100.0 1.2E-35 2.6E-40 349.6 24.4 202 839-1052 5-214 (363)
170 cd03263 ABC_subfamily_A The AB 100.0 9.7E-36 2.1E-40 331.9 22.3 203 166-413 15-219 (220)
171 PRK13634 cbiO cobalt transport 100.0 1.1E-35 2.5E-40 343.9 23.7 218 166-426 20-249 (290)
172 cd03224 ABC_TM1139_LivF_branch 100.0 1.3E-35 2.8E-40 331.5 23.3 211 815-1052 1-216 (222)
173 cd03292 ABC_FtsE_transporter F 100.0 1.4E-35 3E-40 329.3 23.4 207 815-1045 1-213 (214)
174 cd03269 ABC_putative_ATPase Th 100.0 9.4E-36 2E-40 329.5 21.8 201 163-408 10-210 (210)
175 PRK11248 tauB taurine transpor 100.0 3E-35 6.5E-40 334.3 26.2 212 815-1052 2-215 (255)
176 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2E-35 4.3E-40 334.1 24.6 214 815-1052 1-220 (242)
177 PRK13637 cbiO cobalt transport 100.0 2.1E-35 4.6E-40 341.2 25.3 219 814-1052 2-229 (287)
178 PRK09536 btuD corrinoid ABC tr 100.0 1.2E-35 2.7E-40 353.6 23.9 212 163-414 13-227 (402)
179 TIGR00960 3a0501s02 Type II (G 100.0 8.4E-36 1.8E-40 331.4 20.9 195 166-404 16-216 (216)
180 TIGR02315 ABC_phnC phosphonate 100.0 1.1E-35 2.3E-40 336.7 22.1 217 815-1052 2-230 (243)
181 cd03256 ABC_PhnC_transporter A 100.0 1.7E-35 3.8E-40 334.7 23.6 214 166-414 14-233 (241)
182 PRK13647 cbiO cobalt transport 100.0 2.5E-35 5.4E-40 338.5 25.2 215 814-1052 4-222 (274)
183 PRK13650 cbiO cobalt transport 100.0 3.6E-35 7.7E-40 338.2 26.5 205 166-414 20-228 (279)
184 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.2E-35 4.7E-40 338.4 24.6 202 839-1052 36-245 (269)
185 cd03226 ABC_cobalt_CbiO_domain 100.0 1E-35 2.2E-40 327.9 21.0 198 160-405 6-205 (205)
186 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.2E-35 4.8E-40 333.7 24.1 206 166-414 14-224 (242)
187 PRK11831 putative ABC transpor 100.0 4E-35 8.6E-40 336.4 26.6 215 814-1052 7-228 (269)
188 PRK13647 cbiO cobalt transport 100.0 2.5E-35 5.4E-40 338.6 24.9 204 166-413 18-225 (274)
189 PRK10070 glycine betaine trans 100.0 2.5E-35 5.4E-40 350.8 25.3 211 161-414 36-253 (400)
190 COG0411 LivG ABC-type branched 100.0 1.1E-35 2.4E-40 317.0 19.7 217 814-1052 4-234 (250)
191 PRK13631 cbiO cobalt transport 100.0 4E-35 8.6E-40 342.4 26.3 217 166-426 39-279 (320)
192 cd03264 ABC_drug_resistance_li 100.0 2.9E-35 6.4E-40 325.8 23.8 209 815-1050 1-211 (211)
193 PRK11831 putative ABC transpor 100.0 2.7E-35 5.9E-40 337.7 24.2 208 165-414 19-232 (269)
194 COG4175 ProV ABC-type proline/ 100.0 8.8E-36 1.9E-40 324.0 18.8 224 163-437 38-268 (386)
195 cd03268 ABC_BcrA_bacitracin_re 100.0 1.7E-35 3.6E-40 327.0 21.5 198 163-408 10-208 (208)
196 PRK10895 lipopolysaccharide AB 100.0 3.4E-35 7.4E-40 332.1 24.5 215 814-1052 3-221 (241)
197 cd03257 ABC_NikE_OppD_transpor 100.0 3.8E-35 8.2E-40 329.1 24.4 217 815-1050 2-228 (228)
198 COG0410 LivF ABC-type branched 100.0 2.2E-35 4.9E-40 312.3 21.2 213 814-1052 3-221 (237)
199 PRK10908 cell division protein 100.0 4.7E-35 1E-39 326.7 25.0 209 815-1047 2-216 (222)
200 PRK13634 cbiO cobalt transport 100.0 3.2E-35 7E-40 340.2 24.5 218 815-1052 3-230 (290)
201 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.6E-35 3.6E-40 329.6 21.2 195 166-404 17-218 (218)
202 PRK13636 cbiO cobalt transport 100.0 4.3E-35 9.3E-40 338.2 25.4 216 813-1052 4-226 (283)
203 PRK13651 cobalt transporter AT 100.0 2.3E-35 5E-40 342.4 23.3 205 166-414 20-253 (305)
204 PRK10619 histidine/lysine/argi 100.0 6E-35 1.3E-39 333.1 26.2 214 814-1052 5-236 (257)
205 cd03262 ABC_HisP_GlnQ_permease 100.0 3E-35 6.6E-40 326.3 23.0 207 815-1045 1-212 (213)
206 TIGR03415 ABC_choXWV_ATP choli 100.0 3.8E-35 8.2E-40 346.8 25.1 213 159-414 30-253 (382)
207 TIGR00972 3a0107s01c2 phosphat 100.0 5.8E-35 1.3E-39 331.3 25.7 214 815-1052 2-227 (247)
208 TIGR02315 ABC_phnC phosphonate 100.0 2.1E-35 4.7E-40 334.3 22.0 214 165-413 14-233 (243)
209 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4.3E-35 9.3E-40 330.1 24.3 208 164-415 12-221 (236)
210 KOG0055 Multidrug/pheromone ex 100.0 1.3E-35 2.8E-40 375.5 22.2 225 118-415 986-1213(1228)
211 cd03266 ABC_NatA_sodium_export 100.0 2.4E-35 5.2E-40 328.2 21.8 198 167-408 19-218 (218)
212 PRK13643 cbiO cobalt transport 100.0 4.8E-35 1.1E-39 338.4 25.1 217 815-1052 2-228 (288)
213 PRK13651 cobalt transporter AT 100.0 4.2E-35 9.2E-40 340.2 24.7 219 814-1052 2-249 (305)
214 PRK09493 glnQ glutamine ABC tr 100.0 3.9E-35 8.4E-40 331.4 23.8 207 164-414 12-224 (240)
215 PRK13631 cbiO cobalt transport 100.0 5E-35 1.1E-39 341.5 25.1 218 814-1052 21-260 (320)
216 PRK00635 excinuclease ABC subu 100.0 1.4E-33 3E-38 375.3 42.0 134 911-1052 759-901 (1809)
217 PRK11264 putative amino-acid A 100.0 4.1E-35 8.8E-40 333.4 23.4 206 165-414 15-232 (250)
218 PRK11614 livF leucine/isoleuci 100.0 5.4E-35 1.2E-39 329.6 24.1 212 814-1052 5-221 (237)
219 TIGR03740 galliderm_ABC gallid 100.0 8.7E-35 1.9E-39 324.8 25.5 209 815-1053 1-209 (223)
220 COG4559 ABC-type hemin transpo 100.0 2.8E-35 6E-40 303.9 19.7 216 815-1053 2-226 (259)
221 PRK11247 ssuB aliphatic sulfon 100.0 5.6E-35 1.2E-39 331.5 24.2 206 814-1052 12-218 (257)
222 cd03235 ABC_Metallic_Cations A 100.0 3E-35 6.4E-40 326.2 21.6 209 817-1050 2-213 (213)
223 PRK15079 oligopeptide ABC tran 100.0 1.1E-34 2.4E-39 339.8 27.3 229 814-1052 8-246 (331)
224 PRK13646 cbiO cobalt transport 100.0 7.7E-35 1.7E-39 336.6 25.6 206 166-414 20-234 (286)
225 COG4152 ABC-type uncharacteriz 100.0 2.2E-35 4.8E-40 310.5 18.9 213 814-1052 2-214 (300)
226 PRK14247 phosphate ABC transpo 100.0 9.6E-35 2.1E-39 330.3 25.8 221 814-1052 3-229 (250)
227 PRK13650 cbiO cobalt transport 100.0 5.5E-35 1.2E-39 336.6 24.1 216 814-1052 4-224 (279)
228 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.1E-34 2.4E-39 326.7 26.0 212 815-1052 2-216 (236)
229 PRK11629 lolD lipoprotein tran 100.0 6.9E-35 1.5E-39 327.7 24.1 201 166-410 22-229 (233)
230 PRK14273 phosphate ABC transpo 100.0 1.1E-34 2.3E-39 330.6 25.9 215 814-1052 7-233 (254)
231 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 5.7E-35 1.2E-39 378.1 26.8 205 166-415 466-673 (686)
232 TIGR02211 LolD_lipo_ex lipopro 100.0 8.4E-35 1.8E-39 324.6 24.5 211 815-1047 2-220 (221)
233 cd03264 ABC_drug_resistance_li 100.0 3.1E-35 6.8E-40 325.6 20.9 199 164-408 11-211 (211)
234 PRK11300 livG leucine/isoleuci 100.0 8.1E-35 1.7E-39 332.0 24.8 217 814-1052 5-238 (255)
235 PRK09473 oppD oligopeptide tra 100.0 1.3E-34 2.9E-39 339.4 27.2 215 165-415 28-251 (330)
236 PRK10895 lipopolysaccharide AB 100.0 5.2E-35 1.1E-39 330.6 23.0 209 163-414 13-225 (241)
237 TIGR01978 sufC FeS assembly AT 100.0 8.5E-35 1.8E-39 329.4 24.8 219 815-1052 1-229 (243)
238 COG4987 CydC ABC-type transpor 100.0 1.7E-35 3.7E-40 343.5 19.3 208 166-415 351-561 (573)
239 PRK13646 cbiO cobalt transport 100.0 7.2E-35 1.6E-39 336.8 24.6 218 814-1052 2-230 (286)
240 KOG0057 Mitochondrial Fe/S clu 100.0 6.8E-36 1.5E-40 346.9 15.9 212 811-1052 348-569 (591)
241 TIGR03005 ectoine_ehuA ectoine 100.0 1E-34 2.3E-39 330.3 25.4 214 815-1052 1-231 (252)
242 cd03225 ABC_cobalt_CbiO_domain 100.0 4.9E-35 1.1E-39 324.0 22.0 205 817-1043 2-210 (211)
243 PRK14268 phosphate ABC transpo 100.0 1.2E-34 2.7E-39 330.5 25.9 218 814-1052 12-237 (258)
244 PRK14267 phosphate ABC transpo 100.0 1.1E-34 2.4E-39 330.4 25.3 220 814-1052 4-232 (253)
245 PRK13641 cbiO cobalt transport 100.0 9.5E-35 2.1E-39 336.0 25.2 219 814-1052 2-229 (287)
246 PRK11124 artP arginine transpo 100.0 1.1E-34 2.3E-39 328.2 25.1 214 814-1052 2-225 (242)
247 PRK13644 cbiO cobalt transport 100.0 8E-35 1.7E-39 334.4 24.3 213 815-1052 2-219 (274)
248 COG4988 CydD ABC-type transpor 100.0 5.1E-34 1.1E-38 337.7 31.5 213 811-1052 317-538 (559)
249 PRK00349 uvrA excinuclease ABC 100.0 1.7E-33 3.7E-38 362.3 38.9 123 914-1052 791-922 (943)
250 cd03232 ABC_PDR_domain2 The pl 100.0 8.8E-35 1.9E-39 316.6 23.0 190 814-1050 3-192 (192)
251 cd03233 ABC_PDR_domain1 The pl 100.0 1.1E-34 2.4E-39 318.3 23.9 196 814-1050 3-202 (202)
252 PRK13635 cbiO cobalt transport 100.0 9.4E-35 2E-39 334.4 24.2 215 814-1052 5-224 (279)
253 PRK13652 cbiO cobalt transport 100.0 1.3E-34 2.9E-39 333.2 25.5 215 814-1052 3-222 (277)
254 PRK13548 hmuV hemin importer A 100.0 1.3E-34 2.7E-39 330.1 24.9 213 815-1052 3-225 (258)
255 KOG0066 eIF2-interacting prote 100.0 5E-34 1.1E-38 317.6 28.8 217 164-415 275-499 (807)
256 PRK13636 cbiO cobalt transport 100.0 9.3E-35 2E-39 335.4 23.9 207 166-415 19-231 (283)
257 PRK15079 oligopeptide ABC tran 100.0 8.9E-35 1.9E-39 340.7 24.1 209 165-414 33-250 (331)
258 TIGR03411 urea_trans_UrtD urea 100.0 1.4E-34 3E-39 327.4 24.9 215 815-1052 3-226 (242)
259 cd03267 ABC_NatA_like Similar 100.0 1.6E-34 3.6E-39 324.9 25.1 232 121-408 2-236 (236)
260 TIGR03410 urea_trans_UrtE urea 100.0 8.1E-35 1.8E-39 326.7 22.6 205 163-413 10-219 (230)
261 PRK11248 tauB taurine transpor 100.0 1E-34 2.2E-39 329.9 23.6 203 164-411 12-216 (255)
262 PRK14242 phosphate transporter 100.0 2.1E-34 4.5E-39 328.1 26.2 221 812-1052 4-232 (253)
263 PRK09984 phosphonate/organopho 100.0 1.4E-34 3E-39 331.1 24.5 220 814-1053 4-238 (262)
264 COG0444 DppD ABC-type dipeptid 100.0 2.5E-34 5.5E-39 320.0 25.7 231 165-438 17-258 (316)
265 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.3E-34 2.7E-39 320.8 23.2 209 815-1050 1-211 (211)
266 PRK13635 cbiO cobalt transport 100.0 1.2E-34 2.7E-39 333.5 23.9 216 166-425 20-242 (279)
267 PRK11144 modC molybdate transp 100.0 9.6E-35 2.1E-39 344.3 23.6 195 171-414 16-217 (352)
268 cd03292 ABC_FtsE_transporter F 100.0 8E-35 1.7E-39 323.1 21.6 195 166-404 14-214 (214)
269 PRK14245 phosphate ABC transpo 100.0 2.4E-34 5.2E-39 326.9 25.9 219 814-1052 3-229 (250)
270 PRK14241 phosphate transporter 100.0 2.3E-34 4.9E-39 328.5 25.8 217 814-1052 4-237 (258)
271 PRK13641 cbiO cobalt transport 100.0 1.1E-34 2.3E-39 335.6 23.2 205 166-414 20-233 (287)
272 PRK11614 livF leucine/isoleuci 100.0 9.6E-35 2.1E-39 327.6 22.3 204 165-414 17-225 (237)
273 TIGR00972 3a0107s01c2 phosphat 100.0 1.3E-34 2.7E-39 328.6 23.3 208 165-414 13-231 (247)
274 PRK11231 fecE iron-dicitrate t 100.0 1.5E-34 3.3E-39 329.4 24.1 216 815-1053 3-223 (255)
275 PRK10575 iron-hydroxamate tran 100.0 1.7E-34 3.7E-39 330.5 24.6 217 814-1052 11-232 (265)
276 TIGR02673 FtsE cell division A 100.0 9.3E-35 2E-39 322.6 21.7 195 165-403 14-214 (214)
277 TIGR03375 type_I_sec_LssB type 100.0 9.6E-35 2.1E-39 376.4 25.3 208 166-415 478-688 (694)
278 COG4618 ArpD ABC-type protease 100.0 1E-34 2.2E-39 333.6 22.4 235 110-417 325-562 (580)
279 PRK13638 cbiO cobalt transport 100.0 1.9E-34 4.2E-39 331.3 24.8 213 815-1052 2-220 (271)
280 PRK11247 ssuB aliphatic sulfon 100.0 1.1E-34 2.5E-39 329.0 22.4 195 166-411 25-219 (257)
281 PRK13548 hmuV hemin importer A 100.0 1.5E-34 3.3E-39 329.5 23.5 209 163-414 12-229 (258)
282 PRK10744 pstB phosphate transp 100.0 2.8E-34 6E-39 328.1 25.6 224 809-1052 8-239 (260)
283 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 6.1E-33 1.3E-37 359.2 41.5 209 813-1052 450-668 (686)
284 PRK14237 phosphate transporter 100.0 3.8E-34 8.3E-39 327.9 26.8 224 809-1052 15-246 (267)
285 TIGR03411 urea_trans_UrtD urea 100.0 1.9E-34 4.1E-39 326.3 24.0 215 163-414 12-230 (242)
286 COG1245 Predicted ATPase, RNas 100.0 1.5E-33 3.2E-38 318.5 30.8 170 846-1041 360-530 (591)
287 PRK14257 phosphate ABC transpo 100.0 3.2E-34 6.9E-39 335.7 26.6 211 166-414 95-312 (329)
288 cd03233 ABC_PDR_domain1 The pl 100.0 2.3E-34 5.1E-39 315.7 23.8 183 164-408 18-202 (202)
289 PRK10253 iron-enterobactin tra 100.0 1.9E-34 4.2E-39 330.2 24.0 219 813-1053 6-229 (265)
290 PRK10070 glycine betaine trans 100.0 2.3E-34 5.1E-39 342.5 25.6 201 840-1052 41-249 (400)
291 COG4525 TauB ABC-type taurine 100.0 1.5E-34 3.4E-39 293.8 20.4 201 166-411 18-220 (259)
292 PRK11022 dppD dipeptide transp 100.0 4E-34 8.6E-39 335.2 27.1 224 814-1052 3-238 (326)
293 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 8.1E-35 1.7E-39 378.4 23.6 206 166-415 492-700 (710)
294 PRK09473 oppD oligopeptide tra 100.0 4.6E-34 1E-38 334.8 27.6 224 814-1052 12-246 (330)
295 PRK13638 cbiO cobalt transport 100.0 2.3E-34 4.9E-39 330.7 24.5 208 163-414 11-224 (271)
296 TIGR02769 nickel_nikE nickel i 100.0 3.2E-34 6.9E-39 328.4 25.6 223 815-1052 3-235 (265)
297 TIGR02142 modC_ABC molybdenum 100.0 1.8E-34 3.9E-39 342.5 24.4 208 160-414 6-220 (354)
298 PRK10908 cell division protein 100.0 1.6E-34 3.6E-39 322.3 22.7 197 165-405 14-216 (222)
299 cd03257 ABC_NikE_OppD_transpor 100.0 1.9E-34 4.1E-39 323.4 23.3 201 167-408 19-228 (228)
300 PRK14256 phosphate ABC transpo 100.0 5.2E-34 1.1E-38 324.5 27.0 220 814-1052 4-231 (252)
301 PRK13644 cbiO cobalt transport 100.0 1.7E-34 3.6E-39 331.8 23.2 204 166-414 15-223 (274)
302 PRK13632 cbiO cobalt transport 100.0 3E-34 6.5E-39 329.5 25.2 215 814-1052 7-226 (271)
303 PRK13652 cbiO cobalt transport 100.0 2.1E-34 4.5E-39 331.7 23.9 206 166-414 17-226 (277)
304 TIGR03005 ectoine_ehuA ectoine 100.0 1.9E-34 4.1E-39 328.1 23.3 208 164-414 11-235 (252)
305 PRK14247 phosphate ABC transpo 100.0 2.5E-34 5.3E-39 326.9 24.2 214 165-414 15-233 (250)
306 PRK13649 cbiO cobalt transport 100.0 3.1E-34 6.6E-39 331.3 25.3 218 814-1052 2-229 (280)
307 PRK10584 putative ABC transpor 100.0 4.4E-34 9.5E-39 320.3 25.8 213 814-1048 6-226 (228)
308 PRK14268 phosphate ABC transpo 100.0 2.5E-34 5.3E-39 328.1 24.1 211 165-414 24-241 (258)
309 PRK14235 phosphate transporter 100.0 3.8E-34 8.2E-39 327.9 25.7 220 814-1052 19-246 (267)
310 PRK13639 cbiO cobalt transport 100.0 3.1E-34 6.7E-39 329.9 25.0 214 815-1052 2-221 (275)
311 TIGR03740 galliderm_ABC gallid 100.0 2.1E-34 4.6E-39 321.6 23.0 200 163-411 10-209 (223)
312 TIGR03410 urea_trans_UrtE urea 100.0 2.4E-34 5.2E-39 322.9 23.5 210 815-1052 1-216 (230)
313 PRK13632 cbiO cobalt transport 100.0 3.4E-34 7.4E-39 329.0 25.2 205 166-414 22-230 (271)
314 cd03225 ABC_cobalt_CbiO_domain 100.0 1.6E-34 3.4E-39 320.1 21.6 194 166-403 14-211 (211)
315 PRK11300 livG leucine/isoleuci 100.0 2.3E-34 5.1E-39 328.2 23.6 222 165-414 17-242 (255)
316 TIGR03873 F420-0_ABC_ATP propo 100.0 2.5E-34 5.4E-39 327.8 23.8 216 815-1052 2-221 (256)
317 TIGR00958 3a01208 Conjugate Tr 100.0 1.3E-34 2.9E-39 374.3 24.2 206 166-415 494-702 (711)
318 PRK10790 putative multidrug tr 100.0 2.2E-34 4.8E-39 367.0 25.9 206 167-415 355-563 (592)
319 PRK10619 histidine/lysine/argi 100.0 2.4E-34 5.3E-39 328.1 23.4 206 165-414 17-240 (257)
320 PRK11308 dppF dipeptide transp 100.0 5.3E-34 1.2E-38 333.9 26.8 225 814-1052 5-239 (327)
321 cd03300 ABC_PotA_N PotA is an 100.0 4.6E-34 1E-38 320.7 25.2 213 815-1052 1-215 (232)
322 PRK14269 phosphate ABC transpo 100.0 4.1E-34 8.9E-39 324.0 24.9 219 815-1052 3-225 (246)
323 TIGR03415 ABC_choXWV_ATP choli 100.0 4.1E-34 9E-39 337.9 25.9 203 838-1052 35-249 (382)
324 TIGR02211 LolD_lipo_ex lipopro 100.0 2.3E-34 5E-39 321.1 22.5 196 166-405 18-220 (221)
325 TIGR00968 3a0106s01 sulfate AB 100.0 4.7E-34 1E-38 321.6 25.2 213 815-1052 1-215 (237)
326 PRK11022 dppD dipeptide transp 100.0 2.4E-34 5.3E-39 336.9 23.7 214 166-415 20-243 (326)
327 TIGR01277 thiQ thiamine ABC tr 100.0 3.8E-34 8.2E-39 317.3 23.9 210 815-1051 1-212 (213)
328 PRK13639 cbiO cobalt transport 100.0 4.5E-34 9.9E-39 328.5 25.5 205 166-414 15-225 (275)
329 TIGR01193 bacteriocin_ABC ABC- 100.0 1.5E-34 3.3E-39 375.4 24.0 208 166-415 487-697 (708)
330 cd03235 ABC_Metallic_Cations A 100.0 1.3E-34 2.8E-39 321.1 20.0 207 159-408 5-213 (213)
331 PRK13648 cbiO cobalt transport 100.0 5E-34 1.1E-38 327.5 25.4 215 814-1052 7-226 (269)
332 PRK11176 lipid transporter ATP 100.0 1.3E-34 2.9E-39 368.7 22.8 209 166-415 356-567 (582)
333 PRK14273 phosphate ABC transpo 100.0 2.5E-34 5.4E-39 327.5 22.7 207 166-414 20-237 (254)
334 PRK11308 dppF dipeptide transp 100.0 3.2E-34 6.9E-39 335.8 24.1 209 165-415 27-244 (327)
335 PRK14242 phosphate transporter 100.0 4.6E-34 1E-38 325.3 24.8 211 166-414 19-236 (253)
336 PRK14250 phosphate ABC transpo 100.0 2.6E-34 5.6E-39 324.5 22.4 202 165-414 15-220 (241)
337 PRK11124 artP arginine transpo 100.0 2.5E-34 5.4E-39 325.2 22.3 205 165-413 14-228 (242)
338 PRK14257 phosphate ABC transpo 100.0 5.4E-34 1.2E-38 333.8 25.7 221 813-1052 79-308 (329)
339 COG4525 TauB ABC-type taurine 100.0 2.1E-34 4.6E-39 292.8 19.2 214 815-1052 4-219 (259)
340 PRK14259 phosphate ABC transpo 100.0 4.6E-34 1E-38 327.4 24.6 219 813-1052 12-248 (269)
341 PRK11160 cysteine/glutathione 100.0 2.1E-34 4.5E-39 364.5 23.8 207 166-415 353-562 (574)
342 PRK13549 xylose transporter AT 100.0 2.9E-34 6.3E-39 358.4 24.7 221 814-1054 5-229 (506)
343 cd03267 ABC_NatA_like Similar 100.0 5.2E-34 1.1E-38 320.9 24.3 200 839-1050 33-236 (236)
344 TIGR01978 sufC FeS assembly AT 100.0 3.7E-34 8E-39 324.2 23.3 217 162-414 9-233 (243)
345 TIGR01184 ntrCD nitrate transp 100.0 3.4E-34 7.4E-39 321.1 22.7 198 843-1052 1-199 (230)
346 PRK13547 hmuV hemin importer A 100.0 3.8E-34 8.1E-39 327.5 23.5 219 815-1053 2-240 (272)
347 PRK13633 cobalt transporter AT 100.0 3.7E-34 8.1E-39 330.1 23.7 205 166-414 23-232 (280)
348 PRK15093 antimicrobial peptide 100.0 7.1E-34 1.5E-38 334.3 26.4 226 814-1052 3-243 (330)
349 cd03213 ABCG_EPDR ABCG transpo 100.0 5.4E-34 1.2E-38 310.8 23.5 190 814-1050 3-194 (194)
350 PRK13649 cbiO cobalt transport 100.0 6.4E-34 1.4E-38 328.6 25.5 205 166-414 20-233 (280)
351 cd03300 ABC_PotA_N PotA is an 100.0 6.1E-34 1.3E-38 319.7 24.6 209 163-414 10-219 (232)
352 PRK13640 cbiO cobalt transport 100.0 4.5E-34 9.7E-39 329.6 24.0 217 814-1052 5-227 (282)
353 TIGR02769 nickel_nikE nickel i 100.0 4.4E-34 9.6E-39 327.2 23.8 208 165-414 23-239 (265)
354 PRK13633 cobalt transporter AT 100.0 5.1E-34 1.1E-38 329.0 24.2 219 814-1052 4-228 (280)
355 PRK14250 phosphate ABC transpo 100.0 4.3E-34 9.3E-39 322.8 23.1 209 814-1052 3-216 (241)
356 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.8E-34 8.1E-39 317.0 22.0 195 171-408 16-211 (211)
357 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.1E-32 2.3E-37 358.5 39.4 210 813-1052 476-695 (710)
358 PRK14239 phosphate transporter 100.0 8.9E-34 1.9E-38 322.8 25.7 219 814-1052 5-231 (252)
359 PRK14267 phosphate ABC transpo 100.0 4.7E-34 1E-38 325.2 23.4 214 165-414 16-236 (253)
360 TIGR00630 uvra excinuclease AB 100.0 9.8E-33 2.1E-37 354.7 38.2 124 913-1052 788-920 (924)
361 PRK09984 phosphonate/organopho 100.0 3.1E-34 6.8E-39 328.1 22.0 218 164-413 15-240 (262)
362 PRK10253 iron-enterobactin tra 100.0 3.2E-34 6.9E-39 328.4 22.0 212 164-414 18-232 (265)
363 PRK13648 cbiO cobalt transport 100.0 6.3E-34 1.4E-38 326.6 24.4 204 167-414 23-230 (269)
364 PRK14274 phosphate ABC transpo 100.0 8.4E-34 1.8E-38 324.0 25.3 219 814-1052 12-238 (259)
365 PRK10771 thiQ thiamine transpo 100.0 6.3E-34 1.4E-38 319.7 23.6 211 815-1052 2-214 (232)
366 PRK14240 phosphate transporter 100.0 1E-33 2.3E-38 321.8 25.7 219 814-1052 3-229 (250)
367 PRK13645 cbiO cobalt transport 100.0 6.6E-34 1.4E-38 329.7 24.5 219 814-1052 6-235 (289)
368 cd03234 ABCG_White The White s 100.0 5.2E-34 1.1E-38 319.1 22.7 203 165-408 19-226 (226)
369 PRK14244 phosphate ABC transpo 100.0 8.4E-34 1.8E-38 322.6 24.8 219 815-1052 6-232 (251)
370 PRK14270 phosphate ABC transpo 100.0 9.9E-34 2.1E-38 322.1 25.3 218 814-1052 4-230 (251)
371 COG4181 Predicted ABC-type tra 100.0 2.5E-34 5.5E-39 286.3 17.8 213 814-1048 6-226 (228)
372 PRK10575 iron-hydroxamate tran 100.0 3.7E-34 8E-39 327.8 22.0 211 165-414 23-236 (265)
373 PRK14262 phosphate ABC transpo 100.0 1E-33 2.3E-38 321.8 25.5 219 814-1052 3-229 (250)
374 COG4987 CydC ABC-type transpor 100.0 1.9E-34 4.2E-39 334.8 19.6 211 814-1052 336-556 (573)
375 cd03299 ABC_ModC_like Archeal 100.0 8.1E-34 1.8E-38 319.2 24.1 204 168-414 14-218 (235)
376 PRK11231 fecE iron-dicitrate t 100.0 3.9E-34 8.4E-39 326.0 21.7 211 164-414 13-226 (255)
377 PRK15093 antimicrobial peptide 100.0 1.2E-33 2.7E-38 332.2 26.6 218 165-414 19-247 (330)
378 cd03299 ABC_ModC_like Archeal 100.0 1.1E-33 2.4E-38 318.2 24.9 212 815-1052 1-214 (235)
379 PRK14256 phosphate ABC transpo 100.0 7.7E-34 1.7E-38 323.1 23.9 213 165-414 16-235 (252)
380 PRK14258 phosphate ABC transpo 100.0 1.2E-33 2.7E-38 322.8 25.5 221 814-1052 7-240 (261)
381 PRK15112 antimicrobial peptide 100.0 8.5E-34 1.8E-38 325.0 24.2 224 814-1052 4-234 (267)
382 PRK13640 cbiO cobalt transport 100.0 8.1E-34 1.8E-38 327.4 24.1 209 166-415 20-232 (282)
383 cd03262 ABC_HisP_GlnQ_permease 100.0 3.5E-34 7.6E-39 317.8 20.3 197 164-404 11-213 (213)
384 PRK14269 phosphate ABC transpo 100.0 8.4E-34 1.8E-38 321.5 23.7 215 163-414 12-229 (246)
385 TIGR03873 F420-0_ABC_ATP propo 100.0 5.9E-34 1.3E-38 324.8 22.6 210 164-414 12-225 (256)
386 TIGR03608 L_ocin_972_ABC putat 100.0 6.3E-34 1.4E-38 314.0 22.1 189 840-1040 11-206 (206)
387 PRK14253 phosphate ABC transpo 100.0 1.3E-33 2.8E-38 320.8 25.2 219 814-1052 3-228 (249)
388 PRK14239 phosphate transporter 100.0 9.8E-34 2.1E-38 322.4 24.3 212 165-414 17-235 (252)
389 PRK14236 phosphate transporter 100.0 1.7E-33 3.8E-38 323.3 26.5 220 813-1052 24-251 (272)
390 PRK14260 phosphate ABC transpo 100.0 1.4E-33 2.9E-38 322.2 25.3 220 814-1052 7-238 (259)
391 PRK14272 phosphate ABC transpo 100.0 1.8E-33 3.8E-38 320.4 26.2 220 814-1052 4-231 (252)
392 cd03297 ABC_ModC_molybdenum_tr 100.0 1.1E-33 2.4E-38 313.9 23.8 191 845-1050 16-214 (214)
393 PRK11144 modC molybdate transp 100.0 9.5E-34 2.1E-38 335.8 24.7 190 845-1052 16-213 (352)
394 PRK14241 phosphate transporter 100.0 7.9E-34 1.7E-38 324.1 23.2 213 165-414 16-241 (258)
395 COG4152 ABC-type uncharacteriz 100.0 3E-34 6.5E-39 301.9 17.9 216 157-417 6-221 (300)
396 PRK10584 putative ABC transpor 100.0 9.6E-34 2.1E-38 317.6 23.3 197 167-407 24-227 (228)
397 PRK14245 phosphate ABC transpo 100.0 8.1E-34 1.7E-38 322.6 23.0 212 164-414 14-233 (250)
398 TIGR02770 nickel_nikD nickel i 100.0 9.2E-34 2E-38 317.9 23.2 207 168-414 1-214 (230)
399 TIGR01184 ntrCD nitrate transp 100.0 7.2E-34 1.6E-38 318.5 22.3 202 169-413 1-202 (230)
400 PRK10744 pstB phosphate transp 100.0 1.7E-33 3.8E-38 321.5 25.9 211 166-414 26-243 (260)
401 PRK13645 cbiO cobalt transport 100.0 6.3E-34 1.4E-38 329.9 22.4 205 167-414 25-239 (289)
402 PRK14235 phosphate transporter 100.0 9.5E-34 2.1E-38 324.6 23.6 212 166-414 32-250 (267)
403 PRK11174 cysteine/glutathione 100.0 4E-34 8.8E-39 364.6 22.8 210 813-1052 348-567 (588)
404 TIGR01193 bacteriocin_ABC ABC- 100.0 2.3E-32 4.9E-37 355.1 39.4 211 813-1052 472-692 (708)
405 TIGR00968 3a0106s01 sulfate AB 100.0 1.2E-33 2.6E-38 318.3 23.8 208 164-414 11-219 (237)
406 PRK11176 lipid transporter ATP 100.0 1E-33 2.3E-38 360.6 26.3 213 813-1052 340-562 (582)
407 PRK10771 thiQ thiamine transpo 100.0 1E-33 2.2E-38 318.0 23.0 201 171-414 17-218 (232)
408 PRK10418 nikD nickel transport 100.0 1.9E-33 4.1E-38 320.0 25.5 214 813-1052 3-225 (254)
409 PRK14237 phosphate transporter 100.0 1.4E-33 3.1E-38 323.2 24.6 211 166-414 33-250 (267)
410 TIGR02142 modC_ABC molybdenum 100.0 1.1E-33 2.5E-38 335.7 24.5 194 845-1052 15-216 (354)
411 PRK14270 phosphate ABC transpo 100.0 1.3E-33 2.9E-38 321.0 24.0 212 165-414 16-234 (251)
412 PTZ00265 multidrug resistance 100.0 4.5E-34 9.7E-39 388.4 23.4 213 166-415 1181-1452(1466)
413 PRK15112 antimicrobial peptide 100.0 1.1E-33 2.4E-38 324.0 22.9 207 166-414 26-238 (267)
414 PRK14274 phosphate ABC transpo 100.0 1.3E-33 2.7E-38 322.6 23.2 211 166-414 25-242 (259)
415 TIGR00958 3a01208 Conjugate Tr 100.0 2.7E-32 5.9E-37 352.8 38.6 211 813-1052 477-697 (711)
416 PRK14249 phosphate ABC transpo 100.0 2.7E-33 5.8E-38 318.5 25.7 219 814-1052 4-230 (251)
417 COG1132 MdlB ABC-type multidru 100.0 3.1E-34 6.8E-39 363.5 20.1 212 812-1052 326-547 (567)
418 PRK14261 phosphate ABC transpo 100.0 2.5E-33 5.4E-38 319.1 25.2 219 814-1052 6-232 (253)
419 PRK13642 cbiO cobalt transport 100.0 2E-33 4.2E-38 323.6 24.6 216 814-1052 4-224 (277)
420 PRK14248 phosphate ABC transpo 100.0 2.6E-33 5.6E-38 321.5 25.4 215 814-1052 21-247 (268)
421 cd03297 ABC_ModC_molybdenum_tr 100.0 1.7E-33 3.7E-38 312.3 23.1 202 159-408 6-214 (214)
422 PRK14263 phosphate ABC transpo 100.0 3.1E-33 6.7E-38 318.9 25.7 220 812-1052 6-240 (261)
423 PRK10762 D-ribose transporter 100.0 1.3E-33 2.9E-38 352.1 24.8 219 814-1054 4-227 (501)
424 PRK14271 phosphate ABC transpo 100.0 2.9E-33 6.2E-38 321.6 25.6 219 814-1052 21-246 (276)
425 PRK11701 phnK phosphonate C-P 100.0 2.8E-33 6.1E-38 319.5 25.4 215 814-1052 6-236 (258)
426 cd03289 ABCC_CFTR2 The CFTR su 100.0 9.3E-34 2E-38 323.5 21.4 210 814-1052 2-220 (275)
427 PRK13642 cbiO cobalt transport 100.0 3.6E-33 7.7E-38 321.4 26.4 205 166-414 20-228 (277)
428 PRK14275 phosphate ABC transpo 100.0 3.6E-33 7.8E-38 322.5 26.5 218 814-1052 39-265 (286)
429 PRK14271 phosphate ABC transpo 100.0 2E-33 4.4E-38 322.9 24.3 214 163-414 31-250 (276)
430 TIGR01277 thiQ thiamine ABC tr 100.0 1.7E-33 3.8E-38 311.9 22.9 199 168-409 13-212 (213)
431 PRK10790 putative multidrug tr 100.0 1.1E-33 2.4E-38 360.6 24.2 210 813-1052 339-558 (592)
432 PRK11701 phnK phosphonate C-P 100.0 2.2E-33 4.7E-38 320.5 24.1 208 165-414 18-240 (258)
433 PRK13543 cytochrome c biogenes 100.0 2.4E-33 5.2E-38 310.8 23.7 201 814-1041 11-211 (214)
434 COG0444 DppD ABC-type dipeptid 100.0 3.2E-33 7E-38 311.2 24.6 224 815-1052 2-238 (316)
435 PRK14262 phosphate ABC transpo 100.0 2E-33 4.3E-38 319.5 23.5 212 165-414 15-233 (250)
436 TIGR02982 heterocyst_DevA ABC 100.0 2.8E-33 6E-38 311.9 23.9 211 815-1046 2-219 (220)
437 PRK14240 phosphate transporter 100.0 2E-33 4.3E-38 319.5 23.2 211 166-414 16-233 (250)
438 TIGR02770 nickel_nikD nickel i 100.0 1.9E-33 4.2E-38 315.3 22.8 201 842-1052 1-210 (230)
439 PRK11160 cysteine/glutathione 100.0 9.1E-34 2E-38 358.7 22.6 212 813-1052 337-557 (574)
440 PRK14244 phosphate ABC transpo 100.0 2E-33 4.2E-38 319.6 22.9 214 164-414 16-236 (251)
441 PRK09700 D-allose transporter 100.0 1.7E-33 3.6E-38 352.2 24.3 218 814-1053 5-230 (510)
442 PRK14251 phosphate ABC transpo 100.0 4E-33 8.7E-38 317.1 25.3 219 814-1052 4-230 (251)
443 PRK14259 phosphate ABC transpo 100.0 1.7E-33 3.6E-38 322.8 22.0 210 166-415 26-253 (269)
444 PRK14249 phosphate ABC transpo 100.0 3.7E-33 8E-38 317.3 24.6 212 165-414 16-234 (251)
445 PRK14255 phosphate ABC transpo 100.0 5.9E-33 1.3E-37 316.0 26.2 219 814-1052 5-231 (252)
446 TIGR01842 type_I_sec_PrtD type 100.0 3.6E-33 7.7E-38 351.9 27.0 209 166-415 331-542 (544)
447 PRK13657 cyclic beta-1,2-gluca 100.0 2.8E-33 6.1E-38 356.3 26.3 207 167-415 349-558 (588)
448 TIGR03375 type_I_sec_LssB type 100.0 8.8E-33 1.9E-37 358.2 31.2 212 813-1052 462-683 (694)
449 PRK10418 nikD nickel transport 100.0 3.9E-33 8.4E-38 317.5 24.5 209 167-414 17-229 (254)
450 TIGR01846 type_I_sec_HlyB type 100.0 1.9E-33 4.2E-38 364.0 24.9 208 166-415 470-680 (694)
451 PRK14265 phosphate ABC transpo 100.0 4.6E-33 1E-37 319.8 25.3 220 812-1052 18-253 (274)
452 PRK15056 manganese/iron transp 100.0 2.8E-33 6E-38 321.6 23.4 218 814-1053 6-226 (272)
453 PRK13538 cytochrome c biogenes 100.0 2.8E-33 6.1E-38 308.1 22.5 199 815-1040 2-202 (204)
454 PRK14272 phosphate ABC transpo 100.0 3.6E-33 7.8E-38 317.8 24.1 210 164-414 15-235 (252)
455 PRK14253 phosphate ABC transpo 100.0 2.8E-33 6E-38 318.1 22.9 212 164-413 14-231 (249)
456 COG4181 Predicted ABC-type tra 100.0 2.3E-33 4.9E-38 279.5 19.2 202 161-406 18-226 (228)
457 cd03231 ABC_CcmA_heme_exporter 100.0 2.4E-33 5.1E-38 307.8 21.3 196 815-1040 1-198 (201)
458 PRK14263 phosphate ABC transpo 100.0 3.2E-33 6.9E-38 318.8 23.1 216 159-414 14-244 (261)
459 cd03252 ABCC_Hemolysin The ABC 100.0 7.7E-34 1.7E-38 320.3 17.9 211 815-1052 1-220 (237)
460 PRK10419 nikE nickel transport 100.0 5.1E-33 1.1E-37 318.6 24.9 225 814-1053 3-237 (268)
461 COG4148 ModC ABC-type molybdat 100.0 4.3E-34 9.4E-39 305.7 14.8 197 170-415 15-218 (352)
462 PRK13547 hmuV hemin importer A 100.0 2.3E-33 5E-38 321.0 21.9 216 163-414 11-243 (272)
463 TIGR02633 xylG D-xylose ABC tr 100.0 3.4E-33 7.4E-38 348.8 25.3 220 815-1054 2-227 (500)
464 PRK14261 phosphate ABC transpo 100.0 4.8E-33 1E-37 316.8 24.1 212 165-414 18-236 (253)
465 CHL00131 ycf16 sulfate ABC tra 100.0 7.7E-33 1.7E-37 315.1 25.6 220 814-1052 7-236 (252)
466 PRK14254 phosphate ABC transpo 100.0 7.8E-33 1.7E-37 319.3 25.9 213 814-1052 39-264 (285)
467 PRK14238 phosphate transporter 100.0 5.7E-33 1.2E-37 318.7 24.6 218 814-1052 24-250 (271)
468 COG4618 ArpD ABC-type protease 100.0 2E-33 4.4E-38 322.9 20.6 235 802-1065 322-564 (580)
469 TIGR01846 type_I_sec_HlyB type 100.0 1E-31 2.2E-36 348.0 39.2 213 812-1052 453-675 (694)
470 PRK14251 phosphate ABC transpo 100.0 3.8E-33 8.1E-38 317.4 22.8 212 165-414 16-234 (251)
471 TIGR02203 MsbA_lipidA lipid A 100.0 9.4E-32 2E-36 342.2 38.1 213 813-1052 329-551 (571)
472 PRK15439 autoinducer 2 ABC tra 100.0 3.5E-33 7.5E-38 348.5 24.4 211 814-1053 11-225 (510)
473 PRK14248 phosphate ABC transpo 100.0 4.7E-33 1E-37 319.4 23.5 211 166-414 34-251 (268)
474 TIGR02203 MsbA_lipidA lipid A 100.0 3.3E-33 7.1E-38 355.6 24.2 209 166-415 345-556 (571)
475 PRK14243 phosphate transporter 100.0 6.7E-33 1.4E-37 317.1 24.3 218 814-1052 10-243 (264)
476 cd03230 ABC_DR_subfamily_A Thi 100.0 3.7E-33 8.1E-38 298.7 20.8 169 815-1043 1-171 (173)
477 COG4604 CeuD ABC-type enteroch 100.0 4.3E-34 9.4E-39 291.3 12.7 218 157-415 5-225 (252)
478 PRK14275 phosphate ABC transpo 100.0 5.3E-33 1.2E-37 321.1 23.6 212 165-414 51-269 (286)
479 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 7.7E-33 1.7E-37 308.7 23.9 191 839-1050 34-224 (224)
480 PRK14236 phosphate transporter 100.0 5.8E-33 1.3E-37 319.0 23.5 211 166-414 38-255 (272)
481 PRK14260 phosphate ABC transpo 100.0 5.1E-33 1.1E-37 317.5 22.6 211 166-414 20-242 (259)
482 PRK10247 putative ABC transpor 100.0 5.2E-33 1.1E-37 310.6 22.1 209 814-1050 7-220 (225)
483 TIGR01192 chvA glucan exporter 100.0 5.9E-33 1.3E-37 351.8 25.4 207 167-415 349-558 (585)
484 PRK14266 phosphate ABC transpo 100.0 9.5E-33 2.1E-37 313.9 24.6 219 814-1052 3-229 (250)
485 PRK14246 phosphate ABC transpo 100.0 1.2E-32 2.6E-37 313.4 25.3 219 814-1052 10-236 (257)
486 TIGR03608 L_ocin_972_ABC putat 100.0 4.9E-33 1.1E-37 306.9 21.4 195 160-399 5-206 (206)
487 cd03245 ABCC_bacteriocin_expor 100.0 2.9E-33 6.3E-38 312.0 19.8 210 814-1050 2-220 (220)
488 PRK11288 araG L-arabinose tran 100.0 6.1E-33 1.3E-37 346.1 24.7 217 814-1052 4-224 (501)
489 PRK14255 phosphate ABC transpo 100.0 1.1E-32 2.3E-37 313.8 24.6 212 165-414 17-235 (252)
490 PRK14246 phosphate ABC transpo 100.0 1E-32 2.2E-37 313.9 24.4 221 157-414 14-240 (257)
491 PRK10789 putative multidrug tr 100.0 6.6E-33 1.4E-37 350.8 25.3 208 166-415 328-538 (569)
492 TIGR02323 CP_lyasePhnK phospho 100.0 1.1E-32 2.3E-37 314.0 24.6 215 814-1052 3-233 (253)
493 TIGR01842 type_I_sec_PrtD type 100.0 8.1E-33 1.8E-37 348.7 26.0 213 813-1052 315-537 (544)
494 PRK14258 phosphate ABC transpo 100.0 1E-32 2.2E-37 315.3 24.0 213 166-414 20-244 (261)
495 PRK09580 sufC cysteine desulfu 100.0 1.3E-32 2.7E-37 312.7 24.6 219 815-1052 2-230 (248)
496 PRK10419 nikE nickel transport 100.0 8.7E-33 1.9E-37 316.7 23.4 207 165-414 24-240 (268)
497 TIGR02323 CP_lyasePhnK phospho 100.0 1E-32 2.2E-37 314.3 23.5 208 165-414 15-237 (253)
498 PRK13539 cytochrome c biogenes 100.0 8.1E-33 1.7E-37 305.0 22.0 197 815-1041 3-199 (207)
499 COG4598 HisP ABC-type histidin 100.0 2E-33 4.3E-38 281.5 15.4 213 158-414 11-240 (256)
500 PRK10982 galactose/methyl gala 100.0 6.4E-33 1.4E-37 345.4 23.5 206 840-1054 11-220 (491)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-251 Score=2313.95 Aligned_cols=1327 Identities=54% Similarity=0.922 Sum_probs=1245.4
Q ss_pred CCchHHhHHHHHhhCCChhhhhhccccCCCCCCcccccCCCChHhhHHHHHHhhcCCCCCHHHHHHHHHHHHhhcCCCCC
Q 000576 37 VDDEEALKWAALEKLPTYNRLRKGLLSTPSGHGNEIDVDNLGLQERQLLIDKLVKVPDVDNEKFLLKLKNRFDRVGISMP 116 (1412)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1412)
+||||++||||+|||||++| +.+.+... .++|+.+++..++..+.++....-++|+++++.++++|.+++ ++|
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~p 84 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFE--SEVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--ELP 84 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhcc--CcccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cCC
Confidence 34999999999999999998 55543211 179999999999999999999999999999999999999998 889
Q ss_pred ceeEEEeeeeEEEEEecCCCCCCCchhhHHHHHHHHHhhhhhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHH
Q 000576 117 EIEVRFEHLKVEAEAYVGSRALPTFFNFCANIIEGLLNSLNILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLL 196 (1412)
Q Consensus 117 ~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL 196 (1412)
.++++++++.+++++..| ||+.|...+..+.++...+.. ++....||+|+|+.++||++++++|||||||||||
T Consensus 85 ~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttll 158 (1391)
T KOG0065|consen 85 TIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTLL 158 (1391)
T ss_pred ceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHHH
Confidence 999999999999988765 999999998888776655443 44567899999999999999999999999999999
Q ss_pred HHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCC
Q 000576 197 LALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGI 276 (1412)
Q Consensus 197 ~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~ 276 (1412)
++|+|.++...+..|+|+|||++.+++.+++.++|++|+|.|+|+|||||+|+|+++|++++.||+ +..|+|++.
T Consensus 159 kal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~-- 233 (1391)
T KOG0065|consen 159 KALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA-- 233 (1391)
T ss_pred HHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH--
Confidence 999999998777789999999999999989999999999999999999999999999999999988 555665531
Q ss_pred CCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCC
Q 000576 277 KPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLD 356 (1412)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD 356 (1412)
.++|++++++||++|+||+|||+++||+||||||||+||+++++++++++|||+|+|||
T Consensus 234 ---------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GLD 292 (1391)
T KOG0065|consen 234 ---------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGLD 292 (1391)
T ss_pred ---------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeeccccccc
Confidence 26899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHh
Q 000576 357 SSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQE 436 (1412)
Q Consensus 357 ~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~ 436 (1412)
++|+.+|+++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||+++
T Consensus 293 SsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt~ 372 (1391)
T KOG0065|consen 293 SSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLTE 372 (1391)
T ss_pred HHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhhhhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHH
Q 000576 437 VTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQILGDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLL 516 (1412)
Q Consensus 437 v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~ 516 (1412)
+++++++.|+|..+..++.+.++.|+.+.|..++.++++..+++.+.++.+.++.++..++|.+++|+|++.|..|++.+
T Consensus 373 vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~l 452 (1391)
T KOG0065|consen 373 VTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFLL 452 (1391)
T ss_pred hhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCc
Q 000576 517 MKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDGVIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFY 596 (1412)
Q Consensus 517 ~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y 596 (1412)
++||.+.+.++.++.+++|+++|++|+++++ ++..++..+.|++||++++.++++++|+.+++.++|||+|||+..||
T Consensus 453 ~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~fY 530 (1391)
T KOG0065|consen 453 MKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSFY 530 (1391)
T ss_pred HhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhccccc
Confidence 9999999999999999999999999999985 55567788999999999999999999999999999999999999999
Q ss_pred chhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q 000576 597 PSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAGRFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFAL 676 (1412)
Q Consensus 597 ~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~ 676 (1412)
++|+++++.+++++|.+++++++|.+++||++|+.+++++||.+++++++.+++++++||+++++++++..|+++|++.+
T Consensus 531 ~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~~ 610 (1391)
T KOG0065|consen 531 PPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGILL 610 (1391)
T ss_pred ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHHHhcCCcccccCCC---------------CCCchhHHHhhcc
Q 000576 677 LLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVNEFLGHSWRKILPN---------------TTEPLGVEVLQSR 741 (1412)
Q Consensus 677 ~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~nef~~~~~~~~~~~---------------~~~~~G~~~l~~~ 741 (1412)
+++.+++||+|++.+||+||+|++|++|++|+++++++|||++++|.|.+.+ ...++|.+++..+
T Consensus 611 L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g~ 690 (1391)
T KOG0065|consen 611 LVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSGR 690 (1391)
T ss_pred HHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEecc
Confidence 9999999999999999999999999999999999999999999999998321 1356789999999
Q ss_pred Ccc-----ccccchhhhHHHHHHHHHHHHHHHHHHHHhccccccccccc---------cc---ccc-ccccccccCCccC
Q 000576 742 GFF-----TDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRR---------DS---SSQ-SLETITEANQPKR 803 (1412)
Q Consensus 742 ~~~-----~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~---------~~---~~~-~~~~~~~~~~~~~ 803 (1412)
++. ...+|+|+++|+++||.++|++.+++++.|+++........ .. ... ..+...+....++
T Consensus 691 ~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 770 (1391)
T KOG0065|consen 691 DYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAGSSSEIEKLDDSSHQEK 770 (1391)
T ss_pred cccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhcccccccccccccccccc
Confidence 988 77889999999999999999999999999999743322110 00 000 0010111111135
Q ss_pred CCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEE
Q 000576 804 RGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVT 883 (1412)
Q Consensus 804 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~ 883 (1412)
+++..|+.|..++++||.|.+++|.+++.+| +++++|+||||.++||.++||||+||||||||||+|+||++.|.++
T Consensus 771 ~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~ 847 (1391)
T KOG0065|consen 771 NKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIE 847 (1391)
T ss_pred ccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEE
Confidence 6788888899999999999999988877766 6788999999999999999999999999999999999999999999
Q ss_pred EEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCC
Q 000576 884 GNITISGYPKKQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPG 963 (1412)
Q Consensus 884 G~i~i~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~ 963 (1412)
|+|+|||.|++++.|+|.+|||+|+|+|.|.+||||+|.|+|+||++.+++.+++.++||+|++.|||.+++|.+||.||
T Consensus 848 Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~daiVG~~G 927 (1391)
T KOG0065|consen 848 GDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADALVGLPG 927 (1391)
T ss_pred eEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhhhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhhCC-cEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 964 VNGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p-~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
+|||++|||||+||+||++|| .||||||||||||++++..|++++|+++++|+||+||+||||.++|+.||++++|++
T Consensus 928 -~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkr 1006 (1391)
T KOG0065|consen 928 -SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKR 1006 (1391)
T ss_pred -CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhc
Confidence 999999999999999999999 899999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEcCCCCCchHHHHhhhcCCCccCCCCCCCCCcceeEecCccchhhhhccHHHHHhccHHHHHHHHHHHhhcCCC
Q 000576 1043 GGQEIYVGPLGRHSSHLIKYFEGNPGVSKIKNGYNPATWMLEVTSPSQETALGIDFADIYKSSELYRRNKALIKDLSKPA 1122 (1412)
Q Consensus 1043 gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 1122 (1412)
||++||+||+|++++++++|||+++|++ ||+..|||||||||++.+.+...+.||++.|++|+++++++++++++++++
T Consensus 1007 GGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~e~v~~l~~~~ 1085 (1391)
T KOG0065|consen 1007 GGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNKELVKELSQPP 1085 (1391)
T ss_pred CCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHHHhccHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999885 666669999999999999888889999999999999999999999999999
Q ss_pred CC-CCCCCCCCcccCcHHHHHHHHHHHhhhhhccChHHHHHHHHHHHHHHHHHHHhccCCCCCCCCHHhHHHHHhHHHHH
Q 000576 1123 PG-SKDLHFDTQYAQSFFTQCMACLWKQRWSYWRNPPYTAVRFLSTTITSLTFGAMFWDMGTKMTKQQDLFNAMGSMYTA 1201 (1412)
Q Consensus 1123 ~~-~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~ 1201 (1412)
++ +.+..++++|++|+|.|++.|+|||+++|||+|+|+.+|++++++.||++|++||+.|+ ++||++|.+|++|++
T Consensus 1086 ~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~lqn~m~a~yma 1162 (1391)
T KOG0065|consen 1086 PGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGLQNAMGAAYMA 1162 (1391)
T ss_pred ccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHHHHHHHHHHHH
Confidence 88 77888899999999999999999999999999999999999999999999999999995 699999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHH
Q 000576 1202 VLFIGILNAVAVQPVVAIERTVFYRERAAGMYSGMAYAFAQVLIEIPYIFVQAVTYGLIVYAMMQFEWTAAKFFWYLFFM 1281 (1412)
Q Consensus 1202 ~~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~e~p~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~ 1281 (1412)
+++.+..++..++|.+..||.+++||+++||||+.||++||+++|+||.++++.+|.+|+|+|+||++++.+|+||++++
T Consensus 1163 ~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a~~~~~f~~~~ 1242 (1391)
T KOG0065|consen 1163 TVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTASKFFWFLLFM 1242 (1391)
T ss_pred HHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhHHHHHHHHHHH
Confidence 99999998888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHhhCCCcccc
Q 000576 1282 FFTFLYFTFYGMMAVSLTPNHHISAIVSFGFYALWNVFSGFIIPRPRIPIWWKWYYWACPLAWTLYGLIASQYGDKEDRL 1361 (1412)
Q Consensus 1282 ~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~ 1361 (1412)
++..+|+++||||+.+++||.++|+++.+++++++++||||++|++.||.||+||||+||++|+++|++..+++|.+..|
T Consensus 1243 ~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~~~~~d~~v~c 1322 (1391)
T KOG0065|consen 1243 FIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLISSQLGDVEVTC 1322 (1391)
T ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHHHHHHhCCCceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred C----------CCCcHHHHHHhhhC----CccCchhhhHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 000576 1362 E----------SGETVKHFLRSYFG----FKHDFLGVVALVVVAFPMLFAFVFGLGIKFLNFQRR 1412 (1412)
Q Consensus 1362 ~----------~~~~~~~~~~~~~g----~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1412 (1412)
. +|.||++|++++|| |.++.......+.++|.+++.+++.+++|+.|||||
T Consensus 1323 ~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1323 EDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVADAFLAAFNIKYLNFWRN 1387 (1391)
T ss_pred ecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehHHHHHHHHHHHHHHHHHh
Confidence 3 35699999999999 999999999999999999999999999999999987
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.2e-233 Score=2313.66 Aligned_cols=1394 Identities=63% Similarity=1.080 Sum_probs=1262.2
Q ss_pred ccccCCCCCCccccC--CCC---CCCCchHHhHHHHHhhCCChhhhhhccccCC-----CCC---CcccccCCCChHhhH
Q 000576 17 ASRWGSASEGAFSRS--SRR---DEVDDEEALKWAALEKLPTYNRLRKGLLSTP-----SGH---GNEIDVDNLGLQERQ 83 (1412)
Q Consensus 17 ~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~l~~~~~~ 83 (1412)
.++|.. +++|++. +++ +.|||||+|+|||+||||||+|+|++++.+. .|+ ..|+|+++++.++++
T Consensus 18 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (1470)
T PLN03140 18 RSSRNM--EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQ 95 (1470)
T ss_pred hhhhhh--hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHH
Confidence 345633 6888653 211 4678999999999999999999999999653 122 236999999999999
Q ss_pred HHHHHhhcCCCCCHHHHHHHHHHHHhhcCCCCCceeEEEeeeeEEEEEecCCCCCCCchhhHHHHHHHHHhhhhhccccc
Q 000576 84 LLIDKLVKVPDVDNEKFLLKLKNRFDRVGISMPEIEVRFEHLKVEAEAYVGSRALPTFFNFCANIIEGLLNSLNILSSRK 163 (1412)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~ 163 (1412)
.++++++++.++|+++|+.++++|.+++|+++|++||+|+||++++++.++++.+||++|...+.++.+...++....++
T Consensus 96 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~ 175 (1470)
T PLN03140 96 KFIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKK 175 (1470)
T ss_pred HHHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998886665443222334
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMT 243 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 243 (1412)
.+++||+|||+.++|||+++|+||||||||||||+|+|+++++.+++|+|++||+++++..+++.++||+|+|.|++++|
T Consensus 176 ~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lT 255 (1470)
T PLN03140 176 TKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMT 255 (1470)
T ss_pred ccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCc
Confidence 56789999999999999999999999999999999999998876789999999999877766788999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccc
Q 000576 244 VRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIR 323 (1412)
Q Consensus 244 V~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 323 (1412)
|+|||.|+++|++.+.++++..+..+++++.++.|+.+.+.++++.+.++.+.+..++++|+.+||++|+||.||+++++
T Consensus 256 V~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~r 335 (1470)
T PLN03140 256 VKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIR 335 (1470)
T ss_pred HHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCcccc
Confidence 99999999999887777776667777888878888888888999988888888888999999999999999999999999
Q ss_pred cCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCe
Q 000576 324 GISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQ 403 (1412)
Q Consensus 324 ~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~ 403 (1412)
+|||||||||+||++|+++|+++||||||+|||+.++.+|++.|+++++..+.|+|+++|||.++++++||+|++|++|+
T Consensus 336 glSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ 415 (1470)
T PLN03140 336 GISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQ 415 (1470)
T ss_pred CCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCce
Confidence 99999999999999999999999999999999999999999999999876667888888899999999999999999999
Q ss_pred EEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhhhhhhCCCC
Q 000576 404 IVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQILGDELGIPF 483 (1412)
Q Consensus 404 iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (1412)
++|+||++++.+||+++||+||+++++|||+++++++++++++|.....|+++.++++++++|+.++.++.+.+++..+.
T Consensus 416 ivy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 495 (1470)
T PLN03140 416 IVYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPF 495 (1470)
T ss_pred EEEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999888899777778777899999999999999888888777766
Q ss_pred CCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccchhhhHHHH
Q 000576 484 DKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDGVIYAGATF 563 (1412)
Q Consensus 484 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~~~~~g~lf 563 (1412)
++.+.++.....++|..++++|+++|..|++++++||+..+++++++.+++|+++|++|++++++.....++..+.|++|
T Consensus 496 ~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lf 575 (1470)
T PLN03140 496 DKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALL 575 (1470)
T ss_pred hhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHH
Confidence 66555666666677999999999999999999999999999999999999999999999999877666667788899999
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHHHHHHHHHH
Q 000576 564 FIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAGRFFRQYLL 643 (1412)
Q Consensus 564 f~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~ 643 (1412)
|++++.++++++++..++.++|+|+|||+.+||++|+|++++++.++|+.++++++|++++|||+|+.+++++||.++++
T Consensus 576 f~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~ 655 (1470)
T PLN03140 576 FSMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLL 655 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHHHhcCCccc
Q 000576 644 LLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVNEFLGHSWR 723 (1412)
Q Consensus 644 ~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~nef~~~~~~ 723 (1412)
+++.++++.+++++++++++++.+|++++++.++++++++||++++++||+||+|++|+||+.|+++++++|||.+.+|.
T Consensus 656 ~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~ 735 (1470)
T PLN03140 656 VFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWM 735 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998886
Q ss_pred cc-CCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcccccccc---ccc-----ccccc----
Q 000576 724 KI-LPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDI---RRR-----DSSSQ---- 790 (1412)
Q Consensus 724 ~~-~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~---~~~-----~~~~~---- 790 (1412)
+. +.+...+.|..+|+.+++...+.|+|+++++|++++++|+++++++++++++..... .+. .....
T Consensus 736 ~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1470)
T PLN03140 736 NKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPR 815 (1470)
T ss_pred CcccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhcccccccc
Confidence 43 223346789999999999998899999999999999999999999999987522110 000 00000
Q ss_pred --------c---cc----c---c-----ccc-----CCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceee
Q 000576 791 --------S---LE----T---I-----TEA-----NQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVL 842 (1412)
Q Consensus 791 --------~---~~----~---~-----~~~-----~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i 842 (1412)
. .+ . . ... ......++.+|..|..++|+||+|.++.+.+++..+...+++.+
T Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~i 895 (1470)
T PLN03140 816 SLSSADGNNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQL 895 (1470)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceE
Confidence 0 00 0 0 000 01112345567788899999999999887655444444456689
Q ss_pred ecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHH
Q 000576 843 LNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQETFARISGYCEQNDIHSPQVTVYESLL 922 (1412)
Q Consensus 843 L~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~ 922 (1412)
|+|||+.++|||++||||||||||||||++|+|+.++|..+|+|.+||.+.++..+++.+|||+|+|.+++.+||+|+|.
T Consensus 896 L~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~ 975 (1470)
T PLN03140 896 LREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLI 975 (1470)
T ss_pred eeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHH
Confidence 99999999999999999999999999999999998777789999999998765556778999999999999999999999
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHH
Q 000576 923 YSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1002 (1412)
Q Consensus 923 f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~ 1002 (1412)
|++.+|.+.+.+.+++++.++++++.++|.+++|+.+|.+++++|||||||||+||++|+.+|+||||||||+|||+.++
T Consensus 976 ~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a 1055 (1470)
T PLN03140 976 YSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1055 (1470)
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Confidence 99988877666666777889999999999999999999888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCCCCCchHHHHhhhcCCCccCCCCCCCCCcce
Q 000576 1003 AIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPLGRHSSHLIKYFEGNPGVSKIKNGYNPATWM 1082 (1412)
Q Consensus 1003 ~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~ 1082 (1412)
..+++.|++++++|+|||||+|||+.++++.||++++|++||+++|+||.+++++++++||++++|+++||+++||||||
T Consensus 1056 ~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~ 1135 (1470)
T PLN03140 1056 AIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWM 1135 (1470)
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhh
Confidence 99999999999889999999999998889999999999988999999999999999999999998888899999999999
Q ss_pred eEecCccchhhhhccHHHHHhccHHHHHHHHHHHhhcCCCCCCCCCCCCCcccCcHHHHHHHHHHHhhhhhccChHHHHH
Q 000576 1083 LEVTSPSQETALGIDFADIYKSSELYRRNKALIKDLSKPAPGSKDLHFDTQYAQSFFTQCMACLWKQRWSYWRNPPYTAV 1162 (1412)
Q Consensus 1083 l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~ 1162 (1412)
+|+++.+.+...+.||++.|++|++++++++.+++++.+.++.++..++++|++|+++|++.|+||+++++||||.|+.+
T Consensus 1136 l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~ 1215 (1470)
T PLN03140 1136 LEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLV 1215 (1470)
T ss_pred hhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHH
Confidence 99998776666667999999999999999888888877766666666677899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCHHhHHHHHhHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHhcCCCCChHHHHHHH
Q 000576 1163 RFLSTTITSLTFGAMFWDMGTKMTKQQDLFNAMGSMYTAVLFIGILNAVAVQPVVAIERTVFYRERAAGMYSGMAYAFAQ 1242 (1412)
Q Consensus 1163 r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~ 1242 (1412)
|+++++++|+++|++||+++++..+++|+++++|++|++++|+++.++++++|.+..||+||+|||++|+|++.+|++|+
T Consensus 1216 r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~ 1295 (1470)
T PLN03140 1216 RFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQ 1295 (1470)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHH
Confidence 99999999999999999999887778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccc
Q 000576 1243 VLIEIPYIFVQAVTYGLIVYAMMQFEWTAAKFFWYLFFMFFTFLYFTFYGMMAVSLTPNHHISAIVSFGFYALWNVFSGF 1322 (1412)
Q Consensus 1243 ~l~e~p~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf 1322 (1412)
+++|+|+.++++++|++|+|||+||++++.+||||+++++++.++++++|+++++++||.++|++++++++++|++||||
T Consensus 1296 ~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf 1375 (1470)
T PLN03140 1296 VVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGF 1375 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccchhhhhhccCHHHHHHHHHHHHhhCCCccccCC-----CCcHHHHHHhhhCCccCchhhhHHHHHHHHHHHH
Q 000576 1323 IIPRPRIPIWWKWYYWACPLAWTLYGLIASQYGDKEDRLES-----GETVKHFLRSYFGFKHDFLGVVALVVVAFPMLFA 1397 (1412)
Q Consensus 1323 ~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~ 1397 (1412)
++|+++||+||+|+||+||++|+++|+++|||+|.+..|++ ++++++|+.++|||+++++|++++++++|+++|+
T Consensus 1376 ~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~ 1455 (1470)
T PLN03140 1376 FIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVFFA 1455 (1470)
T ss_pred ccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHHHH
Confidence 99999999999999999999999999999999998875532 3578999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCC
Q 000576 1398 FVFGLGIKFLNFQRR 1412 (1412)
Q Consensus 1398 ~~~~~~l~~~~~~~r 1412 (1412)
+++++++|++|||||
T Consensus 1456 ~~~~~~~~~~~~q~r 1470 (1470)
T PLN03140 1456 FIFAFCIRTLNFQTR 1470 (1470)
T ss_pred HHHHHHHHHhhcccC
Confidence 999999999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.2e-183 Score=1844.13 Aligned_cols=1261 Identities=32% Similarity=0.540 Sum_probs=1053.7
Q ss_pred CCHHHHHHHHHHHHhhcCCCCC--ceeEEEeeeeEEEEEecCCCCCCCchhhHHHHHHHHHhhhhhcccccccceeeece
Q 000576 95 VDNEKFLLKLKNRFDRVGISMP--EIEVRFEHLKVEAEAYVGSRALPTFFNFCANIIEGLLNSLNILSSRKKHITILKGV 172 (1412)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 172 (1412)
.|.+++++.++++.++.+...| +++|+|+||++++ ...+...+||+.|...+........+. ..+++++++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 4566777665555555555555 8999999999999 444666789999988776653333221 12334567899999
Q ss_pred eeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCC-CceeEEEECCccCCCcC--ccceEEEEcCCCCcCCCCCHHHHHH
Q 000576 173 SGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL-RLYGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGEMTVRETLA 249 (1412)
Q Consensus 173 s~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~e~l~ 249 (1412)
|+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.+||+++++.. .++.++||+|+|.|++++||+||+.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 99999999999999999999999999999974321 25899999999875432 2356999999999999999999999
Q ss_pred HhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChhh
Q 000576 250 FSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGGQ 329 (1412)
Q Consensus 250 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGGq 329 (1412)
|+++++....+.+. ..+. +..+..++.+++.+||++++||.||++.+++|||||
T Consensus 161 f~~~~~~~~~~~~~---~~~~-----------------------~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPDG---VSRE-----------------------EYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCCC---CCHH-----------------------HHHHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 99877542111000 0000 011223567899999999999999999999999999
Q ss_pred hhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEEecC
Q 000576 330 RKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVYQGP 409 (1412)
Q Consensus 330 kqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G~ 409 (1412)
||||+||++|+.+|++++|||||+|||+.++.++++.|+++++..+.++|+++||+.++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999875567888888888899999999999999999999999
Q ss_pred hhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhhhhhhCCCCCCC---
Q 000576 410 REHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQILGDELGIPFDKT--- 486 (1412)
Q Consensus 410 ~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 486 (1412)
++++.+||+++||+||++.+++||+.++++++++ +++...+. ....+.++++++|+.++.++++.+++..+..+.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~e~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGYEK-KVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccccc-cCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999987542 33222111 123567899999998887766655443221110
Q ss_pred ------------CCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCcccc
Q 000576 487 ------------KSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTD 554 (1412)
Q Consensus 487 ------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~ 554 (1412)
...+.....+.+..++++|++.|.+|+++.++||+..++.++++.+++|+++|++|++.+.+.. +
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~~---~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNTS---D 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCch---h
Confidence 0001122334688899999999999999999999999999999999999999999999876443 3
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCH
Q 000576 555 GVIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNA 634 (1412)
Q Consensus 555 ~~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~ 634 (1412)
...+.|++||++++.++.++.++...+.++|+|+|||..++|++++|+++++++++|+.++.+++|.+++|||+|+.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHH
Q 000576 635 GRFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMV 714 (1412)
Q Consensus 635 ~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~ 714 (1412)
++||.+++++++...++.++++++++++++..+|+.++++.++++++++||++++++||+||+|++|+||+.|++++++.
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCccccc---CCC---------------------CCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHH
Q 000576 715 NEFLGHSWRKI---LPN---------------------TTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFAL 770 (1412)
Q Consensus 715 nef~~~~~~~~---~~~---------------------~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l 770 (1412)
|||.+..+.|. +.+ .....|.++|.. .+.....|.|.+++++++++++|.+++++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999888774 110 113468888884 33334568999999999999999999999
Q ss_pred HHHhcccccccc-----cc----c--------cccccccccccccC---CccCCCc-c----cCC--CCceEEEeceeee
Q 000576 771 ALSFLNWSADDI-----RR----R--------DSSSQSLETITEAN---QPKRRGM-V----LPF--EPHSLTFDDVTYS 823 (1412)
Q Consensus 771 ~l~~l~~~~~~~-----~~----~--------~~~~~~~~~~~~~~---~~~~~~~-~----~~~--~~~~l~~~~l~~~ 823 (1412)
++++..+..... .+ . +.++..+++..+.. .+.+... . .|. ....++|+||+|.
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nl~~~ 768 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFHWRNLTYE 768 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccccccccccccccCCCceEEEEeeEEE
Confidence 999987532210 00 0 00011111111100 0000000 0 111 1224789999998
Q ss_pred eecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC-eEEEEEEEcCccCCcccccceE
Q 000576 824 VDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG-YVTGNITISGYPKKQETFARIS 902 (1412)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~ 902 (1412)
++.+ ++++.+|+|||+.++|||++||||||||||||||++|+|+.++| ..+|+|.+||.+... .+++.+
T Consensus 769 ~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i 838 (1394)
T TIGR00956 769 VKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSI 838 (1394)
T ss_pred ecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcce
Confidence 7522 13467999999999999999999999999999999999987654 346999999998753 467789
Q ss_pred EEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHh
Q 000576 903 GYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELV 982 (1412)
Q Consensus 903 ~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~ 982 (1412)
|||+|+|.+++.+||+|+|.|++.+|.+.+.+++++++.++++++.++|.++.|+.+|.++. +|||||||||+||+||+
T Consensus 839 ~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl~Ia~aL~ 917 (1394)
T TIGR00956 839 GYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRLTIGVELV 917 (1394)
T ss_pred eeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHHHHHHHHH
Confidence 99999999999999999999999998776666677778899999999999999999987654 89999999999999999
Q ss_pred hCCc-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCCCCCchHHHH
Q 000576 983 ANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPLGRHSSHLIK 1061 (1412)
Q Consensus 983 ~~p~-illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~~~~~~~~~~ 1061 (1412)
.+|+ ||||||||||||+.++..|++.|++++++|+|||+|+|||+..+++.||++++|++||+++|+|+.+++++++++
T Consensus 918 ~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~~ 997 (1394)
T TIGR00956 918 AKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTIIN 997 (1394)
T ss_pred cCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHHH
Confidence 9997 999999999999999999999999998889999999999997788999999999988899999999998899999
Q ss_pred hhhcCCCccCCCCCCCCCcceeEecCccchhhhhccHHHHHhccHHHHHHHHHHHhhcCCCCCCC---CCCCCCcccCcH
Q 000576 1062 YFEGNPGVSKIKNGYNPATWMLEVTSPSQETALGIDFADIYKSSELYRRNKALIKDLSKPAPGSK---DLHFDTQYAQSF 1138 (1412)
Q Consensus 1062 yF~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 1138 (1412)
||+++ |.++||+++|||||+||+++...+.....||.+.|++|++++...+.+++...+..... +.....+|+.|+
T Consensus 998 yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 1076 (1394)
T TIGR00956 998 YFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALSKYAASL 1076 (1394)
T ss_pred HHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccccccCCCH
Confidence 99987 55679999999999999998755444456899999999998877666655433221111 111224689999
Q ss_pred HHHHHHHHHHhhhhhccChHHHHHHHHHHHHHHHHHHHhccCCCCCCCCHHhHHHHHhHHHHHHHHHHHHHHHhHHHHHH
Q 000576 1139 FTQCMACLWKQRWSYWRNPPYTAVRFLSTTITSLTFGAMFWDMGTKMTKQQDLFNAMGSMYTAVLFIGILNAVAVQPVVA 1218 (1412)
Q Consensus 1139 ~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~ 1218 (1412)
++|++.|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+++++.++. +.+++|.|+
T Consensus 1077 ~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~-~~~~~~~f~ 1152 (1394)
T TIGR00956 1077 WYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPL-IQQYLPPFV 1152 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHH-HHHhhhhHH
Confidence 999999999999999999999999999999999999999999997 4789999999999998887776 346668888
Q ss_pred HhhhHH-HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHH-------HHHHHHHHHHHHHHHHH
Q 000576 1219 IERTVF-YRERAAGMYSGMAYAFAQVLIEIPYIFVQAVTYGLIVYAMMQFEWTAAK-------FFWYLFFMFFTFLYFTF 1290 (1412)
Q Consensus 1219 ~er~v~-~rE~~~g~Y~~~~y~~a~~l~e~p~~~~~~~~~~~i~Y~m~g~~~~~~~-------f~~~~~~~~~~~~~~~~ 1290 (1412)
.||.+| +|||++|+|++.+|++|++++|+|+.++++++|++|+|||+||++++.+ |++|++++++..+++++
T Consensus 1153 ~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~~~~~~~s 1232 (1394)
T TIGR00956 1153 AQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTMFFLYFST 1232 (1394)
T ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHHHHHHHHH
Confidence 888875 9999999999999999999999999999999999999999999988866 99999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHhhCCCccccCC-------
Q 000576 1291 YGMMAVSLTPNHHISAIVSFGFYALWNVFSGFIIPRPRIPIWWKWYYWACPLAWTLYGLIASQYGDKEDRLES------- 1363 (1412)
Q Consensus 1291 ~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~~------- 1363 (1412)
+|+++++++|+.++|+.+++++++++++||||++|+++||.||+|+||+||++|+++|++.|||+|.+..|..
T Consensus 1233 ~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~~e~~~f~ 1312 (1394)
T TIGR00956 1233 LGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKVKELLTFN 1312 (1394)
T ss_pred HHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCccccceec
Confidence 9999999999999999999999999999999999999999999999999999999999999999998876632
Q ss_pred ---CCcHH--------------------------------HHHHhhhCCccCchhhhHHHHHHHHHHHHHHHHHHHHhh
Q 000576 1364 ---GETVK--------------------------------HFLRSYFGFKHDFLGVVALVVVAFPMLFAFVFGLGIKFL 1407 (1412)
Q Consensus 1364 ---~~~~~--------------------------------~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~ 1407 (1412)
|.||+ +|+. .+|++.++.|+|++++++|++++ +++++++.++
T Consensus 1313 pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~-~~~~~~~~~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1313 PPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLE-PISSKYSGRWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred CCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHH-HcCCcccccccchhhhhHHHHHH-HHHHHhhheE
Confidence 33444 3443 56888899999999999999988 7777877765
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2e-95 Score=910.87 Aligned_cols=575 Identities=31% Similarity=0.566 Sum_probs=504.4
Q ss_pred CCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC-eEEEEEEEc
Q 000576 811 EPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG-YVTGNITIS 889 (1412)
Q Consensus 811 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~ 889 (1412)
.+..+.|+|+++..+.+.. ..+++|+||||.++|||++|||||||||||||||+|+|+...+ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3457899999988764321 3478999999999999999999999999999999999998764 689999999
Q ss_pred CccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 890 GYPKKQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 890 g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
|++.....+++.+|||.|||.+.|++||+|+|.|+|.+|++.+.+.++++++|+++++.+||.+|+|+++|.++.+|+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999998999999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
||||||+||.+|++||+||||||||||||+.++..++++|+++|++|+|||||+|||+.+++++||++++|++ |+++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996 799999
Q ss_pred cCCCCCchHHHHhhhcCCCccCCCCCCCCCcceeEecCcc-chhhhhccHHHH------HhccHHHHHHHH-HHHhhcCC
Q 000576 1050 GPLGRHSSHLIKYFEGNPGVSKIKNGYNPATWMLEVTSPS-QETALGIDFADI------YKSSELYRRNKA-LIKDLSKP 1121 (1412)
Q Consensus 1050 G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~-~~~~~~~~~~~~------~~~s~~~~~~~~-~~~~~~~~ 1121 (1412)
|++ +++.+||+++| . +||+++|||||++|+++.. .... -.+..+. ++..+...+... ..+.+..
T Consensus 253 G~~----~~~~~ff~~~G-~-~~P~~~Npadf~l~l~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 324 (613)
T KOG0061|consen 253 GSP----RELLEFFSSLG-F-PCPELENPADFLLDLLSVDSGTRE-LEEAVRIAKLINKFSQTDNLKKTLEALEKSLST- 324 (613)
T ss_pred cCH----HHHHHHHHhCC-C-CCCCcCChHHHHHHHHccCCCchh-HHhHHHHHHHhhhccccchhhhhHHHHhhhccc-
Confidence 997 78999999985 4 5999999999999998842 1110 0111111 110111111100 0111111
Q ss_pred CCCCCCCCCCCcccCcHHHHHHHHHHHhhhhhccChHHHHHHHHHHHHHHHHHHHhccCCCCCCCCHHhHHHHHhHHHHH
Q 000576 1122 APGSKDLHFDTQYAQSFFTQCMACLWKQRWSYWRNPPYTAVRFLSTTITSLTFGAMFWDMGTKMTKQQDLFNAMGSMYTA 1201 (1412)
Q Consensus 1122 ~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~ 1201 (1412)
.+.. +.....+||.|++.+++|.+++.+|||.+...|+++.+++|+++|++||+++++ ..+++++.|++|+.
T Consensus 325 ---~~~~--~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~g~~~~~ 396 (613)
T KOG0061|consen 325 ---SKKV--EIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGND---AKGIQNRLGLFFFI 396 (613)
T ss_pred ---cccc--ccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCc---hHHHHHHHHHHHHH
Confidence 1111 111268999999999999999999999999999999999999999999999864 56677999999999
Q ss_pred HHHHHHHHHHhHHHHHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHH
Q 000576 1202 VLFIGILNAVAVQPVVAIERTVFYRERAAGMYSGMAYAFAQVLIEIPYIFVQAVTYGLIVYAMMQFEWTAAKFFWYLFFM 1281 (1412)
Q Consensus 1202 ~~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~e~p~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~ 1281 (1412)
+.++.+..+...++.|+.||.+|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++...|++|++++
T Consensus 397 ~~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~ 476 (613)
T KOG0061|consen 397 LSFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLII 476 (613)
T ss_pred HHHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHH
Confidence 99998888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHhhCCCcccc
Q 000576 1282 FFTFLYFTFYGMMAVSLTPNHHISAIVSFGFYALWNVFSGFIIPRPRIPIWWKWYYWACPLAWTLYGLIASQYGDKEDRL 1361 (1412)
Q Consensus 1282 ~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~ 1361 (1412)
++..+.++++|++++++.||...|..+++++...+++|+||+++.++||.||+|++|+|+++|+++|++.|||++....|
T Consensus 477 ~~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~ 556 (613)
T KOG0061|consen 477 LLSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRC 556 (613)
T ss_pred HHHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999733333
Q ss_pred C------CCCcHHHHHHhhhCCccCchhhhHHHHHHHHHHHHHHHHHHHHhhcccC
Q 000576 1362 E------SGETVKHFLRSYFGFKHDFLGVVALVVVAFPMLFAFVFGLGIKFLNFQR 1411 (1412)
Q Consensus 1362 ~------~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~ 1411 (1412)
. +..+..+++. .++++.++.|.++.++++|.++|++++++++++....+
T Consensus 557 ~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~ 611 (613)
T KOG0061|consen 557 FLSGNLCCESTGEDVLK-QLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRK 611 (613)
T ss_pred ccCcCCcccccHHHHHH-hcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 2 2234555554 78999999999999999999999999999999865544
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.6e-94 Score=914.94 Aligned_cols=565 Identities=28% Similarity=0.480 Sum_probs=500.9
Q ss_pred CceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCCC
Q 000576 838 DRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG-YVTGNITISGYPKKQETFARISGYCEQNDIHSPQVT 916 (1412)
Q Consensus 838 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~~yv~Q~~~~~~~lT 916 (1412)
+++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.+...+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999986553 358999999998776667788999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCC-CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 000576 917 VYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 995 (1412)
Q Consensus 917 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~-~~~lSgGqrqRl~ia~~L~~~p~illlDEPTs 995 (1412)
|+||+.|++.++.+.+...+++++.++++++.++|.+++|+.+|.++ .++||||||||++||+||+++|++++|||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999999987777777788889999999999999999999764 57899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCCCCCchHHHHhhhcCCCccCCCCC
Q 000576 996 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPLGRHSSHLIKYFEGNPGVSKIKNG 1075 (1412)
Q Consensus 996 gLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~ 1075 (1412)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|+||. +++.+||+++| . +||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~g-~-~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDLG-H-PCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHcC-C-CCCCC
Confidence 9999999999999999988899999999999988999999999998 5899999997 68999999985 4 69999
Q ss_pred CCCCcceeEecCccchhh-----hhccHHHHHhccHHHHHHHHHHHhhcCCCC---CCCCCCCCCcccCcHHHHHHHHHH
Q 000576 1076 YNPATWMLEVTSPSQETA-----LGIDFADIYKSSELYRRNKALIKDLSKPAP---GSKDLHFDTQYAQSFFTQCMACLW 1147 (1412)
Q Consensus 1076 ~npad~~l~v~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~q~~~l~~ 1147 (1412)
.|||||++|+++...+.+ ...++.+.|++|+.+++..+.......+.+ ........+.+..+++.|++.|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 999999999987543221 113566778777776654443332111111 111111234578899999999999
Q ss_pred HhhhhhccChHHHHHHHHHHHHHHHHHHHhccCCCCCCCCHHhHHHHHhHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHH
Q 000576 1148 KQRWSYWRNPPYTAVRFLSTTITSLTFGAMFWDMGTKMTKQQDLFNAMGSMYTAVLFIGILNAVAVQPVVAIERTVFYRE 1227 (1412)
Q Consensus 1148 R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE 1227 (1412)
|+++.+||||.++.+|+++.+++|+++|++||++++ ++++++++.|++|++++++++.++..+.+.++.||.+|+||
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE 425 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRE 425 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999986 46789999999999999998888778889999999999999
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Q 000576 1228 RAAGMYSGMAYAFAQVLIEIPYIFVQAVTYGLIVYAMMQFEWTAAKFFWYLFFMFFTFLYFTFYGMMAVSLTPNHHISAI 1307 (1412)
Q Consensus 1228 ~~~g~Y~~~~y~~a~~l~e~p~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~ 1307 (1412)
+.+|+|++.+|++|++++|+|+.++.+++|++|+|||+|+++++.+||.|+++++++.++++++|+++++++|+..+|+.
T Consensus 426 ~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~ 505 (617)
T TIGR00955 426 TRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALT 505 (617)
T ss_pred hcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHhhCCCcc-ccCCC------CcHHHHHHhhhCCccC
Q 000576 1308 VSFGFYALWNVFSGFIIPRPRIPIWWKWYYWACPLAWTLYGLIASQYGDKED-RLESG------ETVKHFLRSYFGFKHD 1380 (1412)
Q Consensus 1308 ~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~-~~~~~------~~~~~~~~~~~g~~~~ 1380 (1412)
++++++.++++|+||+++.++||+||+|++|+||++|+++|++.|||++.+. +|..+ +..++++.+.||++.+
T Consensus 506 ~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~ 585 (617)
T TIGR00955 506 VGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSGEVILETLSFRNA 585 (617)
T ss_pred HHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcChHHHHHhcCCCcc
Confidence 9999999999999999999999999999999999999999999999998764 45421 1114666679999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 000576 1381 FLGVVALVVVAFPMLFAFVFGLGIKFLNFQRR 1412 (1412)
Q Consensus 1381 ~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1412 (1412)
+.|.++++|++|.++|+++++++||+....+|
T Consensus 586 ~~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 586 DLYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999998776665
No 6
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=5.2e-94 Score=907.80 Aligned_cols=579 Identities=24% Similarity=0.398 Sum_probs=484.4
Q ss_pred CceEEEeceeeeeecchhh--------------hhcc--ccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcC
Q 000576 812 PHSLTFDDVTYSVDMPQEM--------------KLRG--VLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAG 875 (1412)
Q Consensus 812 ~~~l~~~~l~~~~~~~~~~--------------~~~~--~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g 875 (1412)
+..++|.|++|.+...... +..+ ...+++.+|+|||+++++||++||+|||||||||||++|+|
T Consensus 37 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG 116 (659)
T PLN03211 37 PITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAG 116 (659)
T ss_pred ceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhC
Confidence 5689999999998644200 0000 01134679999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh
Q 000576 876 RKTTGYVTGNITISGYPKKQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR 955 (1412)
Q Consensus 876 ~~~~~~~~G~i~i~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~ 955 (1412)
+..++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+.+.+.+++++.++++++.+||.+++
T Consensus 117 ~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~ 195 (659)
T PLN03211 117 RIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKCE 195 (659)
T ss_pred CCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhc
Confidence 866544689999999986533 3456899999999999999999999998887665555666677899999999999999
Q ss_pred hcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhc
Q 000576 956 QALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1035 (1412)
Q Consensus 956 ~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD 1035 (1412)
|+.+|+...++||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.||
T Consensus 196 ~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D 275 (659)
T PLN03211 196 NTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFD 275 (659)
T ss_pred CceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhc
Confidence 99999877889999999999999999999999999999999999999999999999988899999999999977999999
Q ss_pred cEeEEecCcEEEEEcCCCCCchHHHHhhhcCCCccCCCCCCCCCcceeEecCccchhh---------hhccHHHHHhccH
Q 000576 1036 ELFLLKRGGQEIYVGPLGRHSSHLIKYFEGNPGVSKIKNGYNPATWMLEVTSPSQETA---------LGIDFADIYKSSE 1106 (1412)
Q Consensus 1036 ~v~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~~~~~---------~~~~~~~~~~~s~ 1106 (1412)
++++|++ |+++|.|+. +++++||+++| . +||+++|||||++|+++...+.. ......+.|+++.
T Consensus 276 ~iilL~~-G~iv~~G~~----~~~~~~f~~~G-~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 348 (659)
T PLN03211 276 SVLVLSE-GRCLFFGKG----SDAMAYFESVG-F-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTLL 348 (659)
T ss_pred eEEEecC-CcEEEECCH----HHHHHHHHHCC-C-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhhc
Confidence 9999985 899999997 78999999985 4 69999999999999987532100 0012234453211
Q ss_pred HHHHHHHHHHhh--cC-CCC-----CCCCCC-CCCcccCcHHHHHHHHHHHhhhhhccChHHHHHHHHHHHHHHHHHHHh
Q 000576 1107 LYRRNKALIKDL--SK-PAP-----GSKDLH-FDTQYAQSFFTQCMACLWKQRWSYWRNPPYTAVRFLSTTITSLTFGAM 1177 (1412)
Q Consensus 1107 ~~~~~~~~~~~~--~~-~~~-----~~~~~~-~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~ 1177 (1412)
.++.++.++.. .. +.. ..+... ....+..+||+|+.+|++|++++ |||+.++.+|+++++++|+++|++
T Consensus 349 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~l 426 (659)
T PLN03211 349 -APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLM 426 (659)
T ss_pred -cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHH
Confidence 11111111110 00 000 000000 11235578999999999999988 999999999999999999999999
Q ss_pred ccCCCCCCCCHHhHHHHHhHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 000576 1178 FWDMGTKMTKQQDLFNAMGSMYTAVLFIGILNAVAVQPVVAIERTVFYRERAAGMYSGMAYAFAQVLIEIPYIFVQAVTY 1257 (1412)
Q Consensus 1178 f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~e~p~~~~~~~~~ 1257 (1412)
||+++ ..+++++.|++|++++++++.+++.+++.|+.||+||+|||++|+|++++|++|++++|+|+.++.+++|
T Consensus 427 f~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if 501 (659)
T PLN03211 427 WWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIF 501 (659)
T ss_pred HhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99985 4678999999999999988888888889999999999999999999999999999999999999999999
Q ss_pred hhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhh
Q 000576 1258 GLIVYAMMQFEWTAAKFFWYLFFMFFTFLYFTFYGMMAVSLTPNHHISAIVSFGFYALWNVFSGFIIPRPRIPIWWKWYY 1337 (1412)
Q Consensus 1258 ~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~ 1337 (1412)
++|+|||+||++++.+||+|+++++++.++++++|+++++++|+..+|+.++++++.++++||||+++ +||+||+|++
T Consensus 502 ~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ 579 (659)
T PLN03211 502 LTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIK 579 (659)
T ss_pred HhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999997 7999999999
Q ss_pred ccCHHHHHHHHHHHHhhCCCcc-----ccCCC-----CcHHHHHHhhhCCccCchhhhHHHHHHHHHHHHHHHHHHHHhh
Q 000576 1338 WACPLAWTLYGLIASQYGDKED-----RLESG-----ETVKHFLRSYFGFKHDFLGVVALVVVAFPMLFAFVFGLGIKFL 1407 (1412)
Q Consensus 1338 ~isp~~y~~~~l~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~ 1407 (1412)
|+||++|+++|++.|||++... .|+.. ..| .++. ..++++...|.++++|++|+++|+++++++|+++
T Consensus 580 ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c-~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~ 657 (659)
T PLN03211 580 YISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASC-KFVE-EDVAGQISPATSVSVLIFMFVGYRLLAYLALRRI 657 (659)
T ss_pred HhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCC-ccch-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999987542 35321 112 2222 2344455689999999999999999999999998
Q ss_pred cc
Q 000576 1408 NF 1409 (1412)
Q Consensus 1408 ~~ 1409 (1412)
||
T Consensus 658 ~~ 659 (659)
T PLN03211 658 KH 659 (659)
T ss_pred cC
Confidence 86
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.9e-91 Score=945.01 Aligned_cols=561 Identities=25% Similarity=0.423 Sum_probs=494.2
Q ss_pred CceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC--CeEEEEEEEcCccCCc--ccccceEEEeccCCCCCC
Q 000576 838 DRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT--GYVTGNITISGYPKKQ--ETFARISGYCEQNDIHSP 913 (1412)
Q Consensus 838 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~~~~G~i~i~g~~~~~--~~~~~~~~yv~Q~~~~~~ 913 (1412)
.++.+|+|||+.++|||+++|+||||||||||||+|+|+... .+.+|+|.+||.+..+ ..+++.++|++|+|.|++
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 456799999999999999999999999999999999997532 2368999999987643 234567999999999999
Q ss_pred CCCHHHHHHHHHHhcCCC----CCCHHHHH-HHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEE
Q 000576 914 QVTVYESLLYSAWLRLSP----EVDSKTRK-MFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSII 988 (1412)
Q Consensus 914 ~lTv~E~l~f~a~lr~~~----~~~~~~~~-~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~il 988 (1412)
.+||+|++.|++.+|.+. ....+++. +.++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+|+
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 999999999999887643 23334433 3357789999999999999998888999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCCCCCchHHHHhhhcCC
Q 000576 989 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPLGRHSSHLIKYFEGNP 1067 (1412)
Q Consensus 989 llDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~ 1067 (1412)
+|||||+|||+.++..+++.|++++++ |+|||+++|||+.+++++||++++|++ |+++|+||. +++.+||+++|
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~lG 306 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKMG 306 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHcC
Confidence 999999999999999999999999864 999999999998889999999999995 899999997 78999999985
Q ss_pred CccCCCCCCCCCcceeEecCccchh----------hhhccHHHHHhccHHHHHHHHHHHhhcCCC---------------
Q 000576 1068 GVSKIKNGYNPATWMLEVTSPSQET----------ALGIDFADIYKSSELYRRNKALIKDLSKPA--------------- 1122 (1412)
Q Consensus 1068 g~~~~~~~~npad~~l~v~~~~~~~----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--------------- 1122 (1412)
. +||+++|||||++|+++++.+. ....+|++.|++|+.+++..+.+++.....
T Consensus 307 -~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 307 -F-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred -C-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 4 6999999999999998864311 123479999999998887665554321110
Q ss_pred CCCCCCCCCCcccCcHHHHHHHHHHHhhhhhccChHHHHHHHHHHHHHHHHHHHhccCCCCCCCCHHhHHHHHhHHHHHH
Q 000576 1123 PGSKDLHFDTQYAQSFFTQCMACLWKQRWSYWRNPPYTAVRFLSTTITSLTFGAMFWDMGTKMTKQQDLFNAMGSMYTAV 1202 (1412)
Q Consensus 1123 ~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~ 1202 (1412)
..++.....+.|..|+++|+++|++|+++.+||||.++.+|+++.+++|+++|++||++++ ++++++++.|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHH
Confidence 0011112234588899999999999999999999999999999999999999999999986 4578999999999999
Q ss_pred HHHHHHHHHhHHHHHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHH
Q 000576 1203 LFIGILNAVAVQPVVAIERTVFYRERAAGMYSGMAYAFAQVLIEIPYIFVQAVTYGLIVYAMMQFEWTAAKFFWYLFFMF 1282 (1412)
Q Consensus 1203 ~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~e~p~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~ 1282 (1412)
+++++.++..+ +.+..||+||+|||.+|+|++++|++|++++|+|+.++.+++|++|+|||+||++++.+||.|+++++
T Consensus 462 ~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 99998886665 55668999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHhhCCCccccC
Q 000576 1283 FTFLYFTFYGMMAVSLTPNHHISAIVSFGFYALWNVFSGFIIPRPRIPIWWKWYYWACPLAWTLYGLIASQYGDKEDRLE 1362 (1412)
Q Consensus 1283 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~ 1362 (1412)
++.++++++|+++++++|+..+|+.++++++.++++|+||++|.++||+||+|++|+||++|+++|+++|||++...+|.
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~ 620 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECS 620 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998777663
Q ss_pred ----C---------------------C---CcHHHHHHhhhCCccCchhhhHHHHHHHHHHHHHHHHHHHHhhcc
Q 000576 1363 ----S---------------------G---ETVKHFLRSYFGFKHDFLGVVALVVVAFPMLFAFVFGLGIKFLNF 1409 (1412)
Q Consensus 1363 ----~---------------------~---~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1409 (1412)
. | .++.+|+...||++++++|++++++++|+++|+++++++++++++
T Consensus 621 ~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 621 QYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred ccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 0 1 146789988899999999999999999999999999999999873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.8e-90 Score=929.74 Aligned_cols=562 Identities=24% Similarity=0.390 Sum_probs=484.6
Q ss_pred CceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCCC
Q 000576 838 DRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG-YVTGNITISGYPKKQETFARISGYCEQNDIHSPQVT 916 (1412)
Q Consensus 838 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~~yv~Q~~~~~~~lT 916 (1412)
.++.+|+||||.++|||+++|+|||||||||||++|+|+..+. ..+|+|.+||.+..+...++.++||+|+|.|++.+|
T Consensus 176 ~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lT 255 (1470)
T PLN03140 176 TKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMT 255 (1470)
T ss_pred ccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCc
Confidence 3577999999999999999999999999999999999976542 468999999998755444678999999999999999
Q ss_pred HHHHHHHHHHhcCCCC-------CCHHHH------------------------HHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 917 VYESLLYSAWLRLSPE-------VDSKTR------------------------KMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 917 v~E~l~f~a~lr~~~~-------~~~~~~------------------------~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
|+|+|.|++.++.+.. ...+++ +..++++++.+||.+++|+.+|+...+
T Consensus 256 V~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~r 335 (1470)
T PLN03140 256 VKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIR 335 (1470)
T ss_pred HHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCcccc
Confidence 9999999988764321 111111 123678999999999999999998889
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
+|||||||||+||++|+.+|+++||||||+|||+.++..+++.|+++++ .|+|||+++|||+.+++++||++++|++ |
T Consensus 336 glSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G 414 (1470)
T PLN03140 336 GISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-G 414 (1470)
T ss_pred CCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-c
Confidence 9999999999999999999999999999999999999999999999986 4899999999998899999999999985 8
Q ss_pred EEEEEcCCCCCchHHHHhhhcCCCccCCCCCCCCCcceeEecCccch-h-----------hhhccHHHHHhccHHHHHHH
Q 000576 1045 QEIYVGPLGRHSSHLIKYFEGNPGVSKIKNGYNPATWMLEVTSPSQE-T-----------ALGIDFADIYKSSELYRRNK 1112 (1412)
Q Consensus 1045 ~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~~~-~-----------~~~~~~~~~~~~s~~~~~~~ 1112 (1412)
+++|+||. +++.+||+++| . +||+++|||||++|+++..+. . ....+|++.|++|+.+++..
T Consensus 415 ~ivy~G~~----~~~~~yF~~lG-f-~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~ 488 (1470)
T PLN03140 415 QIVYQGPR----DHILEFFESCG-F-KCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLE 488 (1470)
T ss_pred eEEEeCCH----HHHHHHHHHcC-C-CCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHH
Confidence 99999997 78999999995 4 699999999999999986432 1 11246899999998887655
Q ss_pred HHHHhhcCCCCCCCCCCCCCcccCcHHHHHHHHHHHhhhhhccChHHHHHHHHHHHHHHHHHHHhccCCCCCCCCHHhHH
Q 000576 1113 ALIKDLSKPAPGSKDLHFDTQYAQSFFTQCMACLWKQRWSYWRNPPYTAVRFLSTTITSLTFGAMFWDMGTKMTKQQDLF 1192 (1412)
Q Consensus 1113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~ 1192 (1412)
+.++.........+.....+.|..|++.|++.|++|+++..||||.++..|+++.+++|+++|++||+++.+..+..+.+
T Consensus 489 ~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~ 568 (1470)
T PLN03140 489 NELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGA 568 (1470)
T ss_pred HHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHH
Confidence 44332110001111111234588999999999999999999999999999999999999999999999986644455667
Q ss_pred HHHhHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHH
Q 000576 1193 NAMGSMYTAVLFIGILNAVAVQPVVAIERTVFYRERAAGMYSGMAYAFAQVLIEIPYIFVQAVTYGLIVYAMMQFEWTAA 1272 (1412)
Q Consensus 1193 ~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~e~p~~~~~~~~~~~i~Y~m~g~~~~~~ 1272 (1412)
...|++|++++++.+.++.. ++.+..||+||+|||++++|++++|++|++++|+|+.++.+++|++|+|||+||+++++
T Consensus 569 ~~~g~lff~~l~~~~~~~~~-l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~ 647 (1470)
T PLN03140 569 LYIGALLFSMIINMFNGFAE-LALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEAS 647 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchh
Confidence 78899999988887766544 57888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHH
Q 000576 1273 KFFWYLFFMFFTFLYFTFYGMMAVSLTPNHHISAIVSFGFYALWNVFSGFIIPRPRIPIWWKWYYWACPLAWTLYGLIAS 1352 (1412)
Q Consensus 1273 ~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~ 1352 (1412)
+||.|+++++++.++++++++++++++|+..+|+.++++++.++++|+||++|+++||+||+|++|+||++|+++|+++|
T Consensus 648 ~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~N 727 (1470)
T PLN03140 648 RFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVN 727 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCccc---cC-CCC-cHHHHHHhhhCCccC--chhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 000576 1353 QYGDKEDR---LE-SGE-TVKHFLRSYFGFKHD--FLGVVALVVVAFPMLFAFVFGLGIKFLN 1408 (1412)
Q Consensus 1353 ~~~~~~~~---~~-~~~-~~~~~~~~~~g~~~~--~~~~~~~il~~~~~~f~~~~~~~l~~~~ 1408 (1412)
||.+.... |. ... ++.+|+ +.+|+..+ +.|+++++|+||+++|.+++++++++++
T Consensus 728 Ef~~~~~~~~~~~~~~~~~G~~~L-~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~ 789 (1470)
T PLN03140 728 EMFAPRWMNKMASDNSTRLGTAVL-NIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLN 789 (1470)
T ss_pred hccCccccCcccCCCCcccHHHHH-HhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99765432 11 112 345555 78999754 5689999999999999999999999987
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.5e-84 Score=808.08 Aligned_cols=563 Identities=26% Similarity=0.466 Sum_probs=500.4
Q ss_pred CceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCCC
Q 000576 838 DRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG-YVTGNITISGYPKKQETFARISGYCEQNDIHSPQVT 916 (1412)
Q Consensus 838 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~~yv~Q~~~~~~~lT 916 (1412)
.+..+|+|+||.++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.++..-++.++|+.|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3467999999999999999999999999999999999965432 235799999999776544788999999999999999
Q ss_pred HHHHHHHHHHhcCCCC----CCHHHHH-HHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000576 917 VYESLLYSAWLRLSPE----VDSKTRK-MFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 991 (1412)
Q Consensus 917 v~E~l~f~a~lr~~~~----~~~~~~~-~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlD 991 (1412)
|+|+|.|+++++.+.. .++.++. +..+.+++.+||++|+|++||+...||+||||||||++|.+++.+++++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999998732 2222222 2678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCCCCCchHHHHhhhcCCCcc
Q 000576 992 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPLGRHSSHLIKYFEGNPGVS 1070 (1412)
Q Consensus 992 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~ 1070 (1412)
|+|+|||+.|+.++.+.||++++. +.|+++++|||+.+++++||+|++|.+ |++||+||. .++++||+++| .
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~G-f- 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDMG-F- 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhcC-c-
Confidence 999999999999999999999864 899999999999999999999999997 899999998 78999999985 4
Q ss_pred CCCCCCCCCcceeEecCccchhh------------hhccHHHHHhccHHHHHHHHHHHhhcCCCCCCCCCCCCCcccCcH
Q 000576 1071 KIKNGYNPATWMLEVTSPSQETA------------LGIDFADIYKSSELYRRNKALIKDLSKPAPGSKDLHFDTQYAQSF 1138 (1412)
Q Consensus 1071 ~~~~~~npad~~l~v~~~~~~~~------------~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1138 (1412)
+||+..++|||+.+|++..++.+ ...+|++.|.+|+.+++.+..++........++.....+.|..|+
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 69999999999999998322111 114799999999999876544332211122223333456799999
Q ss_pred HHHHHHHHHHhhhhhccChHHHHHHHHHHHHHHHHHHHhccCCCCCCCCHHhHHHHHhHHHHHHHHHHHHHHHhHHHHHH
Q 000576 1139 FTQCMACLWKQRWSYWRNPPYTAVRFLSTTITSLTFGAMFWDMGTKMTKQQDLFNAMGSMYTAVLFIGILNAVAVQPVVA 1218 (1412)
Q Consensus 1139 ~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~ 1218 (1412)
|.|++.|+.|.++.+.||..|...++++.+++|+++|++|++... .+..+.+.+.|++||++++..++....+ +...
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHH
Confidence 999999999999999999999999999999999999999999983 4677889999999999999888777665 5666
Q ss_pred HhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000576 1219 IERTVFYRERAAGMYSGMAYAFAQVLIEIPYIFVQAVTYGLIVYAMMQFEWTAAKFFWYLFFMFFTFLYFTFYGMMAVSL 1298 (1412)
Q Consensus 1219 ~er~v~~rE~~~g~Y~~~~y~~a~~l~e~p~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1298 (1412)
+.|+||+|||...+|+|++|.++..+.++|..++.+++|.+|+||++||.+++++||.++++++++..+++++.++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHhhCCCccccC-CCC------------
Q 000576 1299 TPNHHISAIVSFGFYALWNVFSGFIIPRPRIPIWWKWYYWACPLAWTLYGLIASQYGDKEDRLE-SGE------------ 1365 (1412)
Q Consensus 1299 ~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~-~~~------------ 1365 (1412)
+|+...|+.++++.+....+++||+||.++||+||+|++|+||+.|+++++++|||.+.+.+|. .||
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c 675 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVC 675 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999888885 111
Q ss_pred ------------cHHHHHHhhhCCccCchhhhHHHHHHHHHHHHHHHHHHHHhhccc
Q 000576 1366 ------------TVKHFLRSYFGFKHDFLGVVALVVVAFPMLFAFVFGLGIKFLNFQ 1410 (1412)
Q Consensus 1366 ------------~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~ 1410 (1412)
.+.+|++..|.|++.|.|++++|++||.++|.+++.+++.|+|.-
T Consensus 676 ~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 676 AATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred hhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 246788888999999999999999999999999999999999853
No 10
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=3e-76 Score=746.11 Aligned_cols=609 Identities=22% Similarity=0.355 Sum_probs=467.4
Q ss_pred CCceeEEEeeeeEEEEEecCCCCCCCchhhHHHHHHHHHhhhhhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHH
Q 000576 115 MPEIEVRFEHLKVEAEAYVGSRALPTFFNFCANIIEGLLNSLNILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTT 194 (1412)
Q Consensus 115 ~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 194 (1412)
.+.++++|.|+++.+.......+... ....+.. -...+++.++++++++|+|||++++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~-~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILGH-KPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----ccccccc-ccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 35789999999998753210111110 0010000 001223445566788999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHc
Q 000576 195 LLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAA 274 (1412)
Q Consensus 195 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 274 (1412)
||++|+|+++++ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.... ..
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~-------~~------ 174 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS-------LT------ 174 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-------CC------
Confidence 999999998874 3589999999987532 23569999999999999999999999875432100 00
Q ss_pred CCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCC
Q 000576 275 GIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTG 354 (1412)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsg 354 (1412)
.++....++++++.+||++++||.+|++..++|||||||||+||++|+.+|++|+|||||+|
T Consensus 175 ------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 175 ------------------KQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred ------------------HHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 01122346789999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHH
Q 000576 355 LDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFL 434 (1412)
Q Consensus 355 LD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 434 (1412)
||+.++.++++.|+++++ .+.|+|+++||+..+++++||++++|++|+++|+|+++++.+||+++|++||++.|+|||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999876 4567777666666689999999999999999999999999999999999999999999999
Q ss_pred HhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhhhhhhCC---CCCCCC-----CCCc-cccCCCCCCCHHHH
Q 000576 435 QEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQILGDELGI---PFDKTK-----SHPA-ALTTKKYGVGKKES 505 (1412)
Q Consensus 435 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~-~~~~~~~~~s~~~~ 505 (1412)
.++++...+.+.....+.+ ...+++.+.|++.. .+...+.... .....+ ..+. ......+..+++.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998764321100000111 01122333333211 1111000000 000000 0000 00112245678999
Q ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccchhhhHHHHHHHHHHHH-HHHHHHHHHhhcc
Q 000576 506 LKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDGVIYAGATFFIIIMIMF-NGMAEISMTIAKL 584 (1412)
Q Consensus 506 ~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~~~~~g~lff~~~~~~~-~~~~~l~~~~~~~ 584 (1412)
+..+.+|.++. +|+......|+++.+++|+++|++|++.+ ..+.+...|++||.+++.++ ..+..+.....++
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999887 78887778999999999999999999874 12345678999998777554 5566777778899
Q ss_pred hhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000576 585 PIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAGRFFRQYLLLLFVNQMASALFRLIAATGRN 664 (1412)
Q Consensus 585 pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~ 664 (1412)
++|+|||..++|++++|++++++.++|+.++.+++|.+++|||+|+.+++++|+.+++++++...++.+++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHHHhcCCcc-----cccCCCCCCchhHHHhh
Q 000576 665 LVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVNEFLGHSW-----RKILPNTTEPLGVEVLQ 739 (1412)
Q Consensus 665 ~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~nef~~~~~-----~~~~~~~~~~~G~~~l~ 739 (1412)
..+|+.++++..+++++++||+++ +||+||+|++|+||++|+++++++|||.+.+. .|.........+..++.
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999997 79999999999999999999999999976532 33221100001111222
Q ss_pred ccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 000576 740 SRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLN 776 (1412)
Q Consensus 740 ~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~ 776 (1412)
...+. ....|.++++|++++++|.++.+++|++.+
T Consensus 624 ~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 624 EDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222 234688999999999999999999997654
No 11
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.4e-76 Score=751.01 Aligned_cols=569 Identities=25% Similarity=0.418 Sum_probs=476.1
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 242 (1412)
++++++|+|+|++++|||+++|+|||||||||||++|+|+.+++...+|+|.+||++++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 44678999999999999999999999999999999999998875456899999999876544567899999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc-
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM- 321 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~- 321 (1412)
||+|||.|+++++...... .++....++.+++.+||++++||.||+++
T Consensus 115 TV~e~l~f~~~~~~~~~~~-------------------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRVT-------------------------------KKEKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCCC-------------------------------HHHHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 9999999998765321100 01123457889999999999999999864
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
.++|||||||||+||++|+.+|++++|||||+|||+.++.++++.|+++++ .+.|+|+++|||..+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 679999999999999999999999999999999999999999999999976 4677888888888899999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhhhhhhCC
Q 000576 402 GQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQILGDELGI 481 (1412)
Q Consensus 402 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1412)
|+++|+|+++++.+||+++|++||++.+++||+.++++.....+ .+ .....+++.+.++.++..++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSE-----NE--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCcccc-----cc--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 99999999999999999999999999999999999876532211 00 011234455556555444433322211
Q ss_pred CCCCC---CCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccchhh
Q 000576 482 PFDKT---KSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDGVIY 558 (1412)
Q Consensus 482 ~~~~~---~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~~~~ 558 (1412)
..... ...........+..+++.|+..+..|.++..+||+..+..++++.+++++++|++|++.+.+.. .....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~~---~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQK---GVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCHH---HHHHH
Confidence 11000 0000111223467889999999999999999999999999999999999999999999875432 33445
Q ss_pred hHHHHHHHHHHHHHHHHH-HHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHHHH
Q 000576 559 AGATFFIIIMIMFNGMAE-ISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAGRF 637 (1412)
Q Consensus 559 ~g~lff~~~~~~~~~~~~-l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~~f 637 (1412)
.|++|+.++...+.++.. +.....++++|+|||..++|++++|++++.+.++|+.++.+++|.+++|||+|+.+++.+|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 788888888777776544 4555679999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHHHh
Q 000576 638 FRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVNEF 717 (1412)
Q Consensus 638 f~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~nef 717 (1412)
|.+++++++...++.+++.++++++++..+|+.++++.++++++++||+++.++||+||+|++|+||+.|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-cccCCCC---CCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhc
Q 000576 718 LGHSW-RKILPNT---TEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFL 775 (1412)
Q Consensus 718 ~~~~~-~~~~~~~---~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l 775 (1412)
.+..+ .|...+. +...|..+++.+++... +.|.++++++++.++|.++++++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98775 3432221 23458889999888654 458999999999999999999999764
No 12
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-76 Score=738.11 Aligned_cols=581 Identities=31% Similarity=0.526 Sum_probs=489.5
Q ss_pred CceeEEEeeeeEEEEEecCCCCCCCchhhHHHHHHHHHhhhhhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHH
Q 000576 116 PEIEVRFEHLKVEAEAYVGSRALPTFFNFCANIIEGLLNSLNILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTL 195 (1412)
Q Consensus 116 ~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTL 195 (1412)
..++++|+|++++.... ....+++|+||||+++|||++||+||+|||||||
T Consensus 22 ~~~~~~~~~~~~~~~~~-----------------------------~~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTL 72 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEK-----------------------------SKKTKTILKGVSGTAKPGELLAIMGPSGSGKTTL 72 (613)
T ss_pred ccceeEEEEEEEEecCC-----------------------------CCccceeeeCcEEEEecCeEEEEECCCCCCHHHH
Confidence 45789999999987431 1145779999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcC
Q 000576 196 LLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAG 275 (1412)
Q Consensus 196 L~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~ 275 (1412)
|++|+|+..+..+++|+|++||++.+....++.+|||.|+|.+++++||+|++.|+++++-+.+ +
T Consensus 73 L~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~-------- 137 (613)
T KOG0061|consen 73 LNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------L-------- 137 (613)
T ss_pred HHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------C--------
Confidence 9999999987667899999999887776778899999999999999999999999998874321 1
Q ss_pred CCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCC
Q 000576 276 IKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGL 355 (1412)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgL 355 (1412)
..++.+.++|.+++.|||.+|+||+||+...||+||||||||+||..|+.+|+||+||||||||
T Consensus 138 ----------------~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSGL 201 (613)
T KOG0061|consen 138 ----------------SKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSGL 201 (613)
T ss_pred ----------------CHHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCCc
Confidence 1234456789999999999999999999989999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHH
Q 000576 356 DSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQ 435 (1412)
Q Consensus 356 D~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ 435 (1412)
|+.++.++++.|+++|+. ++|+|+++|||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.|++||+.
T Consensus 202 DS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~l 280 (613)
T KOG0061|consen 202 DSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFLL 280 (613)
T ss_pred chhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHHH
Confidence 999999999999999987 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCch--hhhhhhhcCCCCCccCCHhHHHHHHHhcc-hhhhhhhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHH
Q 000576 436 EVTSRK--DQEQYWANKEEPYRFVTVKEFADAFQSFS-VGQILGDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSR 512 (1412)
Q Consensus 436 ~v~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R 512 (1412)
++.+.+ .++..... ......+.++..+ ..+... ....... + ..........++|.|+..+.+|
T Consensus 281 ~l~s~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~-~~~~~~~~~~s~~~q~~~L~~R 346 (613)
T KOG0061|consen 281 DLLSVDSGTRELEEAV--------RIAKLINKFSQTDNLKKTLE-ALEKSLS----T-SKKVEIGTSPSWWTQFKILLKR 346 (613)
T ss_pred HHHccCCCchhHHhHH--------HHHHHhhhccccchhhhhHH-HHhhhcc----c-ccccccccCCcHHHHHHHHHHH
Confidence 987743 11100000 0000000000000 000000 0000000 0 0000011167899999999999
Q ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccchhhhHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHhh
Q 000576 513 ELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDGVIYAGATFFIIIMIMFNGMA-EISMTIAKLPIFYKQR 591 (1412)
Q Consensus 513 ~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~-~l~~~~~~~pvf~k~r 591 (1412)
.+..+.|++.....|.++.+.+++++|.+|++.+...... ....|++||.+.+..+..+. .+.....++++|.||+
T Consensus 347 ~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~ 423 (613)
T KOG0061|consen 347 SLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKGI---QNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRET 423 (613)
T ss_pred HhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHH---HHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH
Confidence 9999999999999999999999999999999986544332 25678888888777676666 5777889999999999
Q ss_pred hcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Q 000576 592 DLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAGRFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTF 671 (1412)
Q Consensus 592 ~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~ 671 (1412)
..+.|+.++|++++.+.++|+.++.+++|.+++|||+|+.++..+|+.+.++.++...++.++..+++++.++...|.++
T Consensus 424 ~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~ 503 (613)
T KOG0061|consen 424 SSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSL 503 (613)
T ss_pred hcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHHHhcCCcccccCC--CCCCchhHHHhhccCccccccc
Q 000576 672 GAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVNEFLGHSWRKILP--NTTEPLGVEVLQSRGFFTDSYW 749 (1412)
Q Consensus 672 ~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~nef~~~~~~~~~~--~~~~~~G~~~l~~~~~~~~~~~ 749 (1412)
+++..+.+++++||+++.+++|.||.|+.|+|+.+|++++++.|+|.+....|... ..+...|.+++...++... .
T Consensus 504 ~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~ 581 (613)
T KOG0061|consen 504 GPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDS--S 581 (613)
T ss_pred HHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCccc--c
Confidence 99999999999999999999999999999999999999999999999744444333 3456778899999888665 4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 000576 750 YWLGVGALLGFIILFNIGFALALSFLN 776 (1412)
Q Consensus 750 ~w~~~~~L~g~~~~f~i~~~l~l~~l~ 776 (1412)
.|.++.++++++++|.++.++++.+..
T Consensus 582 ~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 582 FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 589999999999999999999998753
No 13
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.4e-76 Score=758.50 Aligned_cols=751 Identities=22% Similarity=0.286 Sum_probs=471.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCCCHH
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVR 245 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 245 (1412)
.+.|+|||++|++|+++||+||.||||||||.+|+|+++.. +|+|.++| .+|||+|++ |+.+.|||
T Consensus 534 ~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~p-WI~ngTvr 599 (1381)
T KOG0054|consen 534 EPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQP-WIQNGTVR 599 (1381)
T ss_pred cccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEecccc-HhhCCcHH
Confidence 34899999999999999999999999999999999999864 89999999 599999975 56688999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccC
Q 000576 246 ETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGI 325 (1412)
Q Consensus 246 e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~L 325 (1412)
|||.||..+. .+||+.+.++|.+++|.++.|++|. |.||++++ +|
T Consensus 600 eNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD~--------------------------------TeIGErGi-nL 644 (1381)
T KOG0054|consen 600 ENILFGSPYD--EERYDKVIKACALKKDLEILPFGDL--------------------------------TEIGERGI-NL 644 (1381)
T ss_pred HhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCCc--------------------------------ceecCCcc-CC
Confidence 9999998775 4799999999999999988888874 99999999 69
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEE
Q 000576 326 SGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIV 405 (1412)
Q Consensus 326 SGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv 405 (1412)
|||||||+++|||+++++||++||+|.|++|+++..+|++.+-. ..++++|+|.++| .-+..+.+|.|++|++|+|.
T Consensus 645 SGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~--~~L~~KT~ILVTH-ql~~L~~ad~Iivl~~G~I~ 721 (1381)
T KOG0054|consen 645 SGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIR--GLLRGKTVILVTH-QLQFLPHADQIIVLKDGKIV 721 (1381)
T ss_pred cHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHH--hhhcCCEEEEEeC-chhhhhhCCEEEEecCCeEe
Confidence 99999999999999999999999999999999999999877663 3456777887777 56788999999999999999
Q ss_pred EecChhhHHH---HHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhhhhhhCCC
Q 000576 406 YQGPREHVLE---FFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQILGDELGIP 482 (1412)
Q Consensus 406 ~~G~~~~~~~---~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (1412)
..|+++|+.+ .|+++ +.+....++.+ .....+.......+ .+. +.. .....
T Consensus 722 ~~Gty~el~~~~~~~~~l-------------~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~-~~~-------~~~~~- 775 (1381)
T KOG0054|consen 722 ESGTYEELLKSGGDFAEL-------------AHEEESEQEEE---ASEKDLESGESSRE-SES-RSL-------ESLSS- 775 (1381)
T ss_pred cccCHHHHHhcchhHHHH-------------hhccchhhccc---cccccccccccccc-hhh-hhh-------hhhcc-
Confidence 9999999973 22222 00000000000 00000000000000 000 000 00000
Q ss_pred CCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH------H------HHHHHH-HH--cccCC
Q 000576 483 FDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTT------I------ALVTMT-LF--FRTKM 547 (1412)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~------~------ali~~t-lf--~~~~~ 547 (1412)
..+. .+.......+......|+...++.+.+..|++...... + .+.++. .| +.++.
T Consensus 776 ----~~~~-----~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~ 846 (1381)
T KOG0054|consen 776 ----EEEK-----SKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDD 846 (1381)
T ss_pred ----cccc-----cccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 0000 00000001122222333444444445555555411110 0 111111 11 12221
Q ss_pred CC-------CccccchhhhHHHHHHHHHHHHHHHHH--------------HHHHhhcchhHH-----HhhhcCCcchhhH
Q 000576 548 HR-------DSVTDGVIYAGATFFIIIMIMFNGMAE--------------ISMTIAKLPIFY-----KQRDLQFYPSWAY 601 (1412)
Q Consensus 548 ~~-------~~~~~~~~~~g~lff~~~~~~~~~~~~--------------l~~~~~~~pvf~-----k~r~~~~y~~~ay 601 (1412)
.. +......+|..+.+..++..++.++.. +...+.+.|+-+ ..|.++.++.+.+
T Consensus 847 ~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~ 926 (1381)
T KOG0054|consen 847 GEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDID 926 (1381)
T ss_pred cccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchH
Confidence 11 111122234333333333333333322 222234445432 2488999999999
Q ss_pred HHHhHhhhhhHHHHHHHHHHhhhhhccccCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Q 000576 602 AFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNA------GRFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFA 675 (1412)
Q Consensus 602 ~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~------~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~ 675 (1412)
.++..+......++..++..+.+..+++..... .-+..++.+..+....+..+.|+-+ +++++..++.-.+
T Consensus 927 ~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLes-itRSPi~sh~~Et-- 1003 (1381)
T KOG0054|consen 927 TVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLES-ITRSPIYSHFSET-- 1003 (1381)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhh-cccchHHHhHHHH--
Confidence 999888877777777776666665555543221 1112222233334445566666644 3455544443332
Q ss_pred HHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHHHhcCCcccccCCCCCCchhHHHhhcc-----Cccccccch
Q 000576 676 LLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVNEFLGHSWRKILPNTTEPLGVEVLQSR-----GFFTDSYWY 750 (1412)
Q Consensus 676 ~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~nef~~~~~~~~~~~~~~~~G~~~l~~~-----~~~~~~~~~ 750 (1412)
+.|....| +|-..+.+-..+...++......+.....+.+.....+.+... .+......-
T Consensus 1004 ------l~GlsTIR---------Af~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~ 1068 (1381)
T KOG0054|consen 1004 ------LQGLSTIR---------AFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPS 1068 (1381)
T ss_pred ------hcCcceee---------eccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 33332221 1211222111111111111110000000000101111111000 000000000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccccCC-ccC------CCcccCCCC--ceEEEecee
Q 000576 751 WLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSLETITEANQ-PKR------RGMVLPFEP--HSLTFDDVT 821 (1412)
Q Consensus 751 w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~--~~l~~~~l~ 821 (1412)
-..-..++|+.+.|.+..+-.+.+.. +...+.++++.++|++.++.. +++ .....+..| ..++|+|++
T Consensus 1069 ~~~~~g~vGLslsyal~lt~~l~~~v---R~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~ 1145 (1381)
T KOG0054|consen 1069 GLISPGLVGLSLSYALQLTGLLQWLV---RQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLS 1145 (1381)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHH---HHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeE
Confidence 00013455566665555554444443 333444555566665443222 111 111112223 379999999
Q ss_pred eeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCc---ccc
Q 000576 822 YSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQ---ETF 898 (1412)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~ 898 (1412)
.+|.. +-..+|||||++|+|||++||+|++|||||||+++|.+...+ .+|+|.|||.++.+ .++
T Consensus 1146 ~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~--~~G~I~IDgvdI~~igL~dL 1212 (1381)
T KOG0054|consen 1146 LRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEP--AEGEILIDGVDISKIGLHDL 1212 (1381)
T ss_pred EEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCc--cCCeEEEcCeecccccHHHH
Confidence 88852 234699999999999999999999999999999999986553 57999999999876 457
Q ss_pred cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccC------CCCCCCCCHHHH
Q 000576 899 ARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVG------LPGVNGLSTEQR 972 (1412)
Q Consensus 899 ~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg------~~~~~~lSgGqr 972 (1412)
|+.++.+||||.++.. |+|.|| |+.++..++.++++++..+|.+....+.+ .+++.++|.|||
T Consensus 1213 RsrlsIIPQdPvLFsG-TvR~NL----------DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQR 1281 (1381)
T KOG0054|consen 1213 RSRLSIIPQDPVLFSG-TVRFNL----------DPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQR 1281 (1381)
T ss_pred HhcCeeeCCCCceecC-cccccc----------CcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHH
Confidence 7889999999988754 766665 56666677788999999988776544332 135678999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|.+|+||||+++++||+|||+|+++|++|+..|+++||+-.+ +||||+++|+.+. +. -+|||+||++ |+++++|++
T Consensus 1282 QLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~T-Vm-d~DrVlVld~-G~v~EfdsP 1357 (1381)
T KOG0054|consen 1282 QLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLNT-VM-DSDRVLVLDA-GRVVEFDSP 1357 (1381)
T ss_pred HHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccch-hh-hcCeEEEeeC-CeEeecCCh
Confidence 999999999999999999999999999999999999999875 7999999999874 44 4799999996 899999998
No 14
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-74 Score=726.71 Aligned_cols=806 Identities=21% Similarity=0.290 Sum_probs=437.0
Q ss_pred HhhHHHHHHhhcCCCCCHHHHHHHHHHH-HhhcCCCCCceeEEEeeeeEEEEEecCCCCCCCchhhHHHHHHHHHhhhhh
Q 000576 80 QERQLLIDKLVKVPDVDNEKFLLKLKNR-FDRVGISMPEIEVRFEHLKVEAEAYVGSRALPTFFNFCANIIEGLLNSLNI 158 (1412)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 158 (1412)
+..+....++.++.+..+. +... ....-..-...+++|+|+.+++.
T Consensus 315 ~~a~~aa~~I~~~i~~~~~-----i~~~~~~~~~~~~~~g~ief~nV~FsYP---------------------------- 361 (1228)
T KOG0055|consen 315 AKARAAAYRIFETIDRKPS-----IDPYSKGGRVLSSIKGEIEFRNVCFSYP---------------------------- 361 (1228)
T ss_pred hccccchHHHHHHhcCCCC-----CCcccccCCcccccccceEEEEEEecCC----------------------------
Confidence 3455556666666555443 1100 00111222456899999999752
Q ss_pred cccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCC
Q 000576 159 LSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQH 235 (1412)
Q Consensus 159 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 235 (1412)
.+++..||+|+|+.|++|+.++|+|||||||||++++|.++++|+ +|+|.++|.++.+++. +.++|.|+|+
T Consensus 362 ---sRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~Qe 435 (1228)
T KOG0055|consen 362 ---SRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQE 435 (1228)
T ss_pred ---CCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeec
Confidence 123567999999999999999999999999999999999999998 8999999999988765 4789999998
Q ss_pred CCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccc
Q 000576 236 DVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADT 315 (1412)
Q Consensus 236 d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 315 (1412)
|. ++..||+|||.|+. ||...+...+++. .....+++.+ |++.+||
T Consensus 436 Pv-lF~~tI~eNI~~G~-------------------------~dat~~~i~~a~k-----~ana~~fi~~---lp~g~~T 481 (1228)
T KOG0055|consen 436 PV-LFATTIRENIRYGK-------------------------PDATREEIEEAAK-----AANAHDFILK---LPDGYDT 481 (1228)
T ss_pred hh-hhcccHHHHHhcCC-------------------------CcccHHHHHHHHH-----HccHHHHHHh---hHHhhcc
Confidence 85 55679999999973 2333334444432 2233455555 8999999
Q ss_pred cccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000576 316 MVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDD 395 (1412)
Q Consensus 316 ~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~ 395 (1412)
.||++++. ||||||||++|||||+.+|+|||||||||+||+.+...+.+.|++... ++|||+ +.|....+-+ +|+
T Consensus 482 ~vge~g~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~--grTTiv-VaHRLStIrn-aD~ 556 (1228)
T KOG0055|consen 482 LVGERGVQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASK--GRTTIV-VAHRLSTIRN-ADK 556 (1228)
T ss_pred cccCCCCC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhc--CCeEEE-Eeeehhhhhc-cCE
Confidence 99999884 999999999999999999999999999999999999999999998753 456666 7788877776 999
Q ss_pred EEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHH--HhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhh
Q 000576 396 IILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFL--QEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQ 473 (1412)
Q Consensus 396 vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l--~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1412)
|++|++|+|++.|+++|+++. .--.++.. |+....++. ..+.... .++.....+.+....
T Consensus 557 I~v~~~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~-~~~~~~~-------~~~~~~s~~~s~~~~ 618 (1228)
T KOG0055|consen 557 IAVMEEGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAED-EEEEESL-------KEERSRSLKSSSSSP 618 (1228)
T ss_pred EEEEECCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhc-cccccch-------hhhhhhccccccccc
Confidence 999999999999999999862 00111221 222111110 0000000 000000000000000
Q ss_pred hhhhhhCCC-C--CCCCCC-Cc-cccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHH-------HHHHHHHHHHHHHH
Q 000576 474 ILGDELGIP-F--DKTKSH-PA-ALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFK-------LFQLTTIALVTMTL 541 (1412)
Q Consensus 474 ~~~~~~~~~-~--~~~~~~-~~-~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~-------~~~~~~~ali~~tl 541 (1412)
......... . .+.+.. +. .........++++.++ ..+.++...+.- -....+.+++++.+
T Consensus 619 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~s~~~i~k--------~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~ 690 (1228)
T KOG0055|consen 619 SLSRGSNRSNLLSVKPEGEDPEEPVSEEDEKVSFWRIFK--------LNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQV 690 (1228)
T ss_pred cccCCccccccccccccccccccccccccccccHHHHHH--------hccchhHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 000000000 0 000000 00 0001112333444333 223333222222 22233444444443
Q ss_pred H---cccCCCCCcccc-----chhhhHHHHHHHHHH-----HHHHHHHHHHHhhcchhHHH--hhhcCCcchhhHHHHhH
Q 000576 542 F---FRTKMHRDSVTD-----GVIYAGATFFIIIMI-----MFNGMAEISMTIAKLPIFYK--QRDLQFYPSWAYAFPTW 606 (1412)
Q Consensus 542 f---~~~~~~~~~~~~-----~~~~~g~lff~~~~~-----~~~~~~~l~~~~~~~pvf~k--~r~~~~y~~~ay~l~~~ 606 (1412)
+ +..+. +.+.. ...+.++.+...+.. +|.-+++....-.|..+|.+ ..+..||...-.. +..
T Consensus 691 ~~~f~~~~~--~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l 767 (1228)
T KOG0055|consen 691 LEAFYPPDD--DELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GAL 767 (1228)
T ss_pred HHHHhCCCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHH
Confidence 3 22221 11111 112222222222222 23333333333333333332 1233343222111 111
Q ss_pred hhhh----h-------------HHHHHHHHHHhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccH----
Q 000576 607 IPKI----P-------------ISFVEVAVWVFSTYYVIGFDPNAGRFFRQYLLLLFVNQMASALFRLIAATGRNL---- 665 (1412)
Q Consensus 607 l~~l----p-------------~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~---- 665 (1412)
..++ + +..+.+++..+++-|..|..-..--...+ -++........+++.......
T Consensus 768 ~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~----Pll~~~~~~~~~~~~~~~~~~~~~~ 843 (1228)
T KOG0055|consen 768 SSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATF----PLLILSGYLQKKFLKGFSKDDKKAY 843 (1228)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 1111 0 00111111111111111100000000000 000000000011111111000
Q ss_pred -----HHHHHHHHHHHHHHHHHhcccccc--cCh-hhH--HHHHHHHcHHHHHHHHHHHHHhcCCcccccCCCCCCchhH
Q 000576 666 -----VVANTFGAFALLLLYALGGFVLNR--EDI-KSW--WIWAYWCSPLMYAQNAIMVNEFLGHSWRKILPNTTEPLGV 735 (1412)
Q Consensus 666 -----~~a~~~~~~~~~~~~l~~Gf~i~~--~~i-~~~--~~w~~~isp~~ya~~al~~nef~~~~~~~~~~~~~~~~G~ 735 (1412)
....++..+-.+..+.....+... +.. +++ ..+--+++-+.|+..
T Consensus 844 ~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~s------------------------- 898 (1228)
T KOG0055|consen 844 EEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFS------------------------- 898 (1228)
T ss_pred HHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------
Confidence 001111111111111111111100 000 000 000000111111110
Q ss_pred HHhhccCccccccchhhhHH-----------HH-HHHHHHHHH-HHHHHHHhccccccccccccccc-cccccccccCCc
Q 000576 736 EVLQSRGFFTDSYWYWLGVG-----------AL-LGFIILFNI-GFALALSFLNWSADDIRRRDSSS-QSLETITEANQP 801 (1412)
Q Consensus 736 ~~l~~~~~~~~~~~~w~~~~-----------~L-~g~~~~f~i-~~~l~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~ 801 (1412)
++.-|+.....+|.+.. .. +...+.|.. ...-+..+.....+.... ..+. .-.++....+..
T Consensus 899 ---qs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~A-a~~iF~i~dr~~~i~~~ 974 (1228)
T KOG0055|consen 899 ---QSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIA-AGSIFEILDRKPTIDPD 974 (1228)
T ss_pred ---HHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHH-HHHHHHHhcCCCCCCCC
Confidence 00001111111111100 00 000001110 001111111110000000 0000 000000000011
Q ss_pred cCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCe
Q 000576 802 KRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGY 881 (1412)
Q Consensus 802 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~ 881 (1412)
.+.+...|.-...++++||++.|+..+ ...+|+|+|++|++|+.+||+|||||||||.+.+|-+..++
T Consensus 975 ~~~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp-- 1042 (1228)
T KOG0055|consen 975 STSGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDP-- 1042 (1228)
T ss_pred CCCCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCC--
Confidence 111222233345799999999997542 45799999999999999999999999999999999876543
Q ss_pred EEEEEEEcCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH-------cCC
Q 000576 882 VTGNITISGYPKKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMEL-------VEL 951 (1412)
Q Consensus 882 ~~G~i~i~g~~~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~-------l~l 951 (1412)
..|.|.|||.++++ ..+|+.+|.|.|+|.++. .|++||+.|+. .+.+.++ +.++.+. .+|
T Consensus 1043 ~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~-----~~vs~~e----Ii~Aak~ANaH~FI~sL 1112 (1228)
T KOG0055|consen 1043 DAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS-----EEVSEEE----IIEAAKLANAHNFISSL 1112 (1228)
T ss_pred CCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC-----CCCCHHH----HHHHHHHhhhHHHHhcC
Confidence 58999999998765 356788999999999885 59999999981 1133222 2333332 234
Q ss_pred chhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHH
Q 000576 952 NLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1031 (1412)
Q Consensus 952 ~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~ 1031 (1412)
.+-.||.+|..|. +||||||||++|||||++||+||+|||+||.||+++.+.|+++|.+.. .|||.|+++|++| ..
T Consensus 1113 P~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAHRLS--TI 1188 (1228)
T KOG0055|consen 1113 PQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAHRLS--TI 1188 (1228)
T ss_pred cCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEecchh--hh
Confidence 4556788887665 699999999999999999999999999999999999999999999875 5899999999987 46
Q ss_pred HhhccEeEEecCcEEEEEcCC
Q 000576 1032 EAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1032 ~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
+.+|.|.++++ |++++.|.-
T Consensus 1189 qnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1189 QNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred hcCCEEEEEEC-CEEEecccH
Confidence 78999999985 899999973
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.6e-69 Score=726.81 Aligned_cols=225 Identities=27% Similarity=0.414 Sum_probs=193.4
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++|+++.|+. .++.+|+|||+.|++||++||+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 1936 ~~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~ 2002 (2272)
T TIGR01257 1936 DILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKS 2002 (2272)
T ss_pred ceEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEE
Confidence 35899999998841 125699999999999999999999999999999999997654 47999999988
Q ss_pred CCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHH
Q 000576 893 KKQ--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTE 970 (1412)
Q Consensus 893 ~~~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgG 970 (1412)
+.. ...++.+|||+|++.+++.+||+|++.+.+.++.. ..++.++.++++++.++|.+.+|..++ .||||
T Consensus 2003 i~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~---~~~~~~~~v~~lLe~lgL~~~~dk~~~-----~LSGG 2074 (2272)
T TIGR01257 2003 ILTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGV---PAEEIEKVANWSIQSLGLSLYADRLAG-----TYSGG 2074 (2272)
T ss_pred CcchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHcCCHHHhcCChh-----hCCHH
Confidence 642 22456799999999999999999999988776532 233445678899999999988887654 79999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 971 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 971 qrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
|||||+||+||+.+|+||+|||||+|||+.+++.+++.|++++++|+|||+|+|+++ ++..+|||+++|.+ |++++.|
T Consensus 2075 qKqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~G 2152 (2272)
T TIGR01257 2075 NKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLG 2152 (2272)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999878999999999987 68889999999995 8999999
Q ss_pred CCCCCchHHHHhhh
Q 000576 1051 PLGRHSSHLIKYFE 1064 (1412)
Q Consensus 1051 ~~~~~~~~~~~yF~ 1064 (1412)
++ +++..-|.
T Consensus 2153 s~----q~Lk~~~g 2162 (2272)
T TIGR01257 2153 TI----QHLKSKFG 2162 (2272)
T ss_pred CH----HHHHHHhC
Confidence 87 55555553
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.3e-69 Score=733.52 Aligned_cols=211 Identities=23% Similarity=0.302 Sum_probs=177.4
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++|+||+++|+. +...+|+|||++|+|||++||+|+||||||||+++|.|...+ .+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p--~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVEL--ERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCEe
Confidence 36999999999952 123599999999999999999999999999999999997654 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh-------hcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR-------QALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~vg~~ 962 (1412)
+.+ ..+++.+++|||++.++.. |+||||.+.. +.+ ++.++++++..++.+.. |+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCC----HHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 764 4567889999999998875 9999996431 122 33467788877775433 4445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
+.+||||||||+||||||+++|+||+||||||+||+++++.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999986 4899999999987 3566999999995
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|+++..|++
T Consensus 1448 -G~IvE~Gt~ 1456 (1622)
T PLN03130 1448 -GRVVEFDTP 1456 (1622)
T ss_pred -CEEEEeCCH
Confidence 899999986
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.4e-68 Score=726.07 Aligned_cols=211 Identities=22% Similarity=0.280 Sum_probs=177.3
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++|+||+++|+. +.+.+|+|+|++|+|||++||+||||||||||+++|.|...+ .+|+|.|||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEL--EKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcC--CCceEEECCEE
Confidence 36999999999941 224599999999999999999999999999999999997654 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh-------hcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR-------QALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~vg~~ 962 (1412)
+.+ ..+++.++||||++.+++. |+||||.+. .+.+ ++.++++++..++.+.. |+.+|..
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~------~~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPF------SEHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCC------CCCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 754 4577889999999998875 999999642 1222 23467788887776543 4455543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
+.+||||||||+||||||+++|+||+||||||+||+++++.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1369 -G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1369 -GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999875 4899999999986 4566999999995
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|+++..|++
T Consensus 1445 -G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 -GQVLEYDSP 1453 (1495)
T ss_pred -CEEEEECCH
Confidence 899999986
No 18
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=6.2e-67 Score=716.59 Aligned_cols=211 Identities=18% Similarity=0.227 Sum_probs=177.6
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++|+||+++|+.. ...+|+|||++|+|||++||+|+||||||||+++|.|...+ .+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~--~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES--AEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC--CCCeEEECCEE
Confidence 469999999999521 13599999999999999999999999999999999997654 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh-------hcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR-------QALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~vg~~ 962 (1412)
+.+ ..+++.++||||++.+++. |+||||... .+.+ ++.++++++..++.+.. |+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~------~~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPF------SQYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCcc------cCCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 764 4567889999999999875 999999521 1222 23467788888876543 4455543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
+.+||||||||+||||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999875 4799999999986 4567999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|+++..|++
T Consensus 1495 -G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 -GEVAEFGAP 1503 (1522)
T ss_pred -CEEEEECCH
Confidence 899999986
No 19
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=7.7e-66 Score=610.74 Aligned_cols=474 Identities=26% Similarity=0.338 Sum_probs=367.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCC-CCceeEEEECCccCCCcCc-------cceEEEEcCCC-
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS-LRLYGRVTYNGHNMDEFVP-------QRTAAYISQHD- 236 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 236 (1412)
..+++||||+|.+||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++||+|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 56999999999999999999999999999999999999876 4468999999997654433 26799999985
Q ss_pred -CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccc
Q 000576 237 -VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADT 315 (1412)
Q Consensus 237 -~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 315 (1412)
.+-|-+||.+.|.-..+.++... .++....+.++|+.+||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 55667899888875544432111 12334456779999999987654
Q ss_pred cccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000576 316 MVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDD 395 (1412)
Q Consensus 316 ~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~ 395 (1412)
+++++.|||||||||.||+||+.+|++|++||||++||+.++.+|++.|+++.+. .++.++.++|+..-+.+++|+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e-~g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRE-LGMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHH-cCcEEEEEcCCHHHHHHhcCe
Confidence 6788999999999999999999999999999999999999999999999999864 578888899999999999999
Q ss_pred EEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhh
Q 000576 396 IILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQIL 475 (1412)
Q Consensus 396 vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (1412)
|+||++|++++.|+.+++... | ..||.. .+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p-------------------------~hpYT~-----------------~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------P-------------------------QHPYTR-----------------GL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------c-------------------------CCcccH-----------------HH
Confidence 999999999999999998541 1 011100 00
Q ss_pred hhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccc
Q 000576 476 GDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDG 555 (1412)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~ 555 (1412)
..
T Consensus 255 l~------------------------------------------------------------------------------ 256 (539)
T COG1123 255 LA------------------------------------------------------------------------------ 256 (539)
T ss_pred Hh------------------------------------------------------------------------------
Confidence 00
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHH
Q 000576 556 VIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAG 635 (1412)
Q Consensus 556 ~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~ 635 (1412)
..|.....+
T Consensus 257 ---------------------------a~p~~~~~~-------------------------------------------- 265 (539)
T COG1123 257 ---------------------------AVPRLGDEK-------------------------------------------- 265 (539)
T ss_pred ---------------------------hCCCccccc--------------------------------------------
Confidence 000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHH
Q 000576 636 RFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVN 715 (1412)
Q Consensus 636 ~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~n 715 (1412)
T Consensus 266 -------------------------------------------------------------------------------- 265 (539)
T COG1123 266 -------------------------------------------------------------------------------- 265 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccc
Q 000576 716 EFLGHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSLETI 795 (1412)
Q Consensus 716 ef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~ 795 (1412)
.
T Consensus 266 --------~----------------------------------------------------------------------- 266 (539)
T COG1123 266 --------I----------------------------------------------------------------------- 266 (539)
T ss_pred --------c-----------------------------------------------------------------------
Confidence 0
Q ss_pred cccCCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcC
Q 000576 796 TEANQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAG 875 (1412)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g 875 (1412)
....... ..+ ....++++||+..|..++.+. ........+++||||.+++||++||+|+||||||||.++|+|
T Consensus 267 ---~~~~~~~-~~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~g 339 (539)
T COG1123 267 ---IRLPRRG-PLR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAG 339 (539)
T ss_pred ---ccccccc-ccc-cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhC
Confidence 0000000 000 122478999998887543211 011234679999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEcCccC--Cc---ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q 000576 876 RKTTGYVTGNITISGYPK--KQ---ETFARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMEL 948 (1412)
Q Consensus 876 ~~~~~~~~G~i~i~g~~~--~~---~~~~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~ 948 (1412)
...+ .+|.|.++|.+. +. ...++.+-+++||+ .+.|.+||++.+.-....... ....++++++.++++.
T Consensus 340 L~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~--~~~~~~~~rv~~ll~~ 415 (539)
T COG1123 340 LLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGG--GSGAERRARVAELLEL 415 (539)
T ss_pred CCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcc--cchHHHHHHHHHHHHH
Confidence 8765 479999999762 11 12345566677765 578999999999765443322 2256667789999999
Q ss_pred cCCch-hhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCC
Q 000576 949 VELNL-LRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQP 1026 (1412)
Q Consensus 949 l~l~~-~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp 1026 (1412)
++|.. ..+.. ...||||||||++|||||+.+|++|++|||||.||+..+..|.+.|+++.++ |.|.|+++||.
T Consensus 416 VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl 490 (539)
T COG1123 416 VGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDL 490 (539)
T ss_pred cCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCH
Confidence 99985 23333 3579999999999999999999999999999999999999999999999865 99999999998
Q ss_pred cHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 1027 SIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1027 ~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
+ -+-+.|||+++|.+ |++|..||.
T Consensus 491 ~-vV~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 491 A-VVRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred H-HHHhhCceEEEEEC-CeEEEeCCH
Confidence 7 47788999999995 899999975
No 20
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7.8e-65 Score=687.72 Aligned_cols=217 Identities=19% Similarity=0.330 Sum_probs=178.4
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC------------
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG------------ 880 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~------------ 880 (1412)
..++|+||+|+|+.. ++..+|+|+|++|+||+++||+||||||||||+++|.|...+.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 369999999999621 1236999999999999999999999999999999999976541
Q ss_pred ----------------------------------------eEEEEEEEcCccCCc---ccccceEEEeccCCCCCCCCCH
Q 000576 881 ----------------------------------------YVTGNITISGYPKKQ---ETFARISGYCEQNDIHSPQVTV 917 (1412)
Q Consensus 881 ----------------------------------------~~~G~i~i~g~~~~~---~~~~~~~~yv~Q~~~~~~~lTv 917 (1412)
+.+|+|.+||.++.+ ..+++.+|||+|++.++ +.|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccH
Confidence 147999999998754 45788899999999887 4799
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchh-------hhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEE
Q 000576 918 YESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLL-------RQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 990 (1412)
Q Consensus 918 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illl 990 (1412)
+||+.|+. ++.++ +.++++++..++.+. .|+.+|..| ..||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~-----~~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G-~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK-----EDATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPYG-KSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC-----CCCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCCC-CcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99998752 22333 236667777666543 367777544 56999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhhccEeEEecC---cE-EEEEcCC
Q 000576 991 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLLKRG---GQ-EIYVGPL 1052 (1412)
Q Consensus 991 DEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g---G~-~~y~G~~ 1052 (1412)
|||||+||+.+++.|++.|+++. .+++|+|+++|+++ ..+.+|+|++|++| |+ ++..|+-
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 35899999999985 46789999999973 67 4578873
No 21
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.2e-64 Score=691.55 Aligned_cols=211 Identities=22% Similarity=0.258 Sum_probs=178.1
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..|+|+||+++|+. +...+|+||||+|+|||++||+|+||||||||+++|.|...+ .+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p--~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEV--CGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEE
Confidence 36999999999952 223599999999999999999999999999999999997654 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh-------hcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR-------QALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~vg~~ 962 (1412)
+.+ ..+++.++||||++.++.. |++|||... .+.+ ++.++++++..++.+.. |+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 754 4578899999999998875 999999421 1222 34578888888886543 5556553
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEe
Q 000576 963 GVNGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLK 1041 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~-p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~ 1041 (1412)
+.+||||||||+||||||+++ |+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 457999999999999999996 89999999999999999999999999875 4799999999985 567899999998
Q ss_pred cCcEEEEEcCC
Q 000576 1042 RGGQEIYVGPL 1052 (1412)
Q Consensus 1042 ~gG~~~y~G~~ 1052 (1412)
+ |+++..|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 5 899999986
No 22
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-64 Score=631.77 Aligned_cols=463 Identities=21% Similarity=0.294 Sum_probs=352.8
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCCCc
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHDVH 238 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~ 238 (1412)
++++++|+|||+++++|++++|+|||||||||||++|+|.++|+ ..+|+|.++|+++..... ++.++||+|++.+
T Consensus 15 ~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~ 93 (506)
T PRK13549 15 FGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELAL 93 (506)
T ss_pred eCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEecccc
Confidence 34456999999999999999999999999999999999999861 127999999998764332 3569999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++.+||+||+.++......+. . +. .+....++++++.+||++..+..++
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~-~-------------------~~-----------~~~~~~~~~~l~~~~l~~~~~~~~~ 142 (506)
T PRK13549 94 VKELSVLENIFLGNEITPGGI-M-------------------DY-----------DAMYLRAQKLLAQLKLDINPATPVG 142 (506)
T ss_pred CCCCcHHHHhhhcccccccCC-c-------------------CH-----------HHHHHHHHHHHHHcCCCCCcccchh
Confidence 899999999998753210000 0 00 0112235678999999877766554
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ .+++|++++|+..++.+++|+|++
T Consensus 143 -----~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~~~tvi~~tH~~~~~~~~~d~v~~ 215 (506)
T PRK13549 143 -----NLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA--HGIACIYISHKLNEVKAISDTICV 215 (506)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCcHHHHHHhcCEEEE
Confidence 6999999999999999999999999999999999999999999999864 356777799999999999999999
Q ss_pred EeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhhhhh
Q 000576 399 ISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQILGDE 478 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1412)
|++|++++.|+.+++.. . +..+.+
T Consensus 216 l~~G~i~~~~~~~~~~~---------------~-----------------------------~~~~~~------------ 239 (506)
T PRK13549 216 IRDGRHIGTRPAAGMTE---------------D-----------------------------DIITMM------------ 239 (506)
T ss_pred EECCEEeeecccccCCH---------------H-----------------------------HHHHHh------------
Confidence 99999998886543210 0 000000
Q ss_pred hCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccchhh
Q 000576 479 LGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDGVIY 558 (1412)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~~~~ 558 (1412)
.. ..
T Consensus 240 ----------------------------------------------------------------~~----~~-------- 243 (506)
T PRK13549 240 ----------------------------------------------------------------VG----RE-------- 243 (506)
T ss_pred ----------------------------------------------------------------hC----cC--------
Confidence 00 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHHHHH
Q 000576 559 AGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAGRFF 638 (1412)
Q Consensus 559 ~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~~ff 638 (1412)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHHHhc
Q 000576 639 RQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVNEFL 718 (1412)
Q Consensus 639 ~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~nef~ 718 (1412)
.+.
T Consensus 244 -----------------------------------------------------~~~------------------------ 246 (506)
T PRK13549 244 -----------------------------------------------------LTA------------------------ 246 (506)
T ss_pred -----------------------------------------------------ccc------------------------
Confidence 000
Q ss_pred CCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccc
Q 000576 719 GHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSLETITEA 798 (1412)
Q Consensus 719 ~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 798 (1412)
.. + . .
T Consensus 247 ------~~----------------------------------------------------------------~---~--~ 251 (506)
T PRK13549 247 ------LY----------------------------------------------------------------P---R--E 251 (506)
T ss_pred ------cc----------------------------------------------------------------c---c--c
Confidence 00 0 0 0
Q ss_pred CCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC
Q 000576 799 NQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT 878 (1412)
Q Consensus 799 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~ 878 (1412)
... + ....++++|+++.++.. +++.+|+|+|++|++||++||+||||||||||+++|+|...
T Consensus 252 ~~~-------~-~~~~l~~~~l~~~~~~~----------~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~ 313 (506)
T PRK13549 252 PHT-------I-GEVILEVRNLTAWDPVN----------PHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYP 313 (506)
T ss_pred ccC-------C-CCceEEEecCccccccc----------cccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCC
Confidence 000 0 01137889998876310 12358999999999999999999999999999999999754
Q ss_pred CCeEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHHHHHHHHHHhcCCC--CCCHHHHHHHHHHHHHHc
Q 000576 879 TGYVTGNITISGYPKKQE----TFARISGYCEQND---IHSPQVTVYESLLYSAWLRLSP--EVDSKTRKMFIEEVMELV 949 (1412)
Q Consensus 879 ~~~~~G~i~i~g~~~~~~----~~~~~~~yv~Q~~---~~~~~lTv~E~l~f~a~lr~~~--~~~~~~~~~~v~~~l~~l 949 (1412)
+ +.+|+|.++|.++... ..++.++|++|+. .+++.+||.|++.+........ .....+.++.++++++.+
T Consensus 314 ~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 392 (506)
T PRK13549 314 G-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRL 392 (506)
T ss_pred C-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhc
Confidence 2 1379999999875421 1244689999985 4678899999998753211110 012233445688999999
Q ss_pred CCc-hhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcH
Q 000576 950 ELN-LLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSI 1028 (1412)
Q Consensus 950 ~l~-~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~ 1028 (1412)
++. +..+..+ ..|||||||||+||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||++||+++
T Consensus 393 ~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~- 466 (506)
T PRK13549 393 KVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELP- 466 (506)
T ss_pred CccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHH-
Confidence 996 4555543 479999999999999999999999999999999999999999999999888999999999986
Q ss_pred HHHHhhccEeEEecCcEEEEEcCCCC
Q 000576 1029 DIFEAFDELFLLKRGGQEIYVGPLGR 1054 (1412)
Q Consensus 1029 ~i~~~fD~v~ll~~gG~~~y~G~~~~ 1054 (1412)
++.+.||++++|++ |+++..|+..+
T Consensus 467 ~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 467 EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 57889999999985 89999887743
No 23
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-65 Score=633.78 Aligned_cols=461 Identities=21% Similarity=0.291 Sum_probs=350.6
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCCCc
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHDVH 238 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~ 238 (1412)
++++++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+
T Consensus 15 ~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~ 91 (510)
T PRK09700 15 FGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSV 91 (510)
T ss_pred cCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccc
Confidence 34456999999999999999999999999999999999999887 7999999998765432 2469999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++.+||+||+.++..... ..+.. +..+ ..+....++.+++.+||++..|+.++
T Consensus 92 ~~~~tv~e~l~~~~~~~~--~~~~~--------------~~~~-----------~~~~~~~~~~~l~~~gl~~~~~~~~~ 144 (510)
T PRK09700 92 IDELTVLENLYIGRHLTK--KVCGV--------------NIID-----------WREMRVRAAMMLLRVGLKVDLDEKVA 144 (510)
T ss_pred cCCCcHHHHhhhcccccc--ccccc--------------cccC-----------HHHHHHHHHHHHHHcCCCCCcccchh
Confidence 899999999987532100 00000 0000 00112345678999999877776654
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
+|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++++ .+++|+.++|+..++.+++|++++
T Consensus 145 -----~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~g~tiiivsHd~~~~~~~~d~v~~ 217 (510)
T PRK09700 145 -----NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK--EGTAIVYISHKLAEIRRICDRYTV 217 (510)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEEEE
Confidence 6999999999999999999999999999999999999999999999865 366777799999999999999999
Q ss_pred EeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhhhhh
Q 000576 399 ISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQILGDE 478 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1412)
|++|++++.|+++++.. . +..+..
T Consensus 218 l~~G~i~~~g~~~~~~~---------------~-----------------------------~~~~~~------------ 241 (510)
T PRK09700 218 MKDGSSVCSGMVSDVSN---------------D-----------------------------DIVRLM------------ 241 (510)
T ss_pred EECCEEeeecchhhCCH---------------H-----------------------------HHHHHh------------
Confidence 99999999887654310 0 000000
Q ss_pred hCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccchhh
Q 000576 479 LGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDGVIY 558 (1412)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~~~~ 558 (1412)
.. .. ..
T Consensus 242 ----------------------------------------------------------------~~----~~-~~----- 247 (510)
T PRK09700 242 ----------------------------------------------------------------VG----RE-LQ----- 247 (510)
T ss_pred ----------------------------------------------------------------cC----CC-cc-----
Confidence 00 00 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHHHHH
Q 000576 559 AGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAGRFF 638 (1412)
Q Consensus 559 ~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~~ff 638 (1412)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHHHhc
Q 000576 639 RQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVNEFL 718 (1412)
Q Consensus 639 ~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~nef~ 718 (1412)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccc
Q 000576 719 GHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSLETITEA 798 (1412)
Q Consensus 719 ~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 798 (1412)
... . . . . .
T Consensus 248 -~~~---~-~---------------------------------------------------------------~---~-~ 255 (510)
T PRK09700 248 -NRF---N-A---------------------------------------------------------------M---K-E 255 (510)
T ss_pred -ccc---c-c---------------------------------------------------------------c---c-c
Confidence 000 0 0 0 0 0
Q ss_pred CCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC
Q 000576 799 NQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT 878 (1412)
Q Consensus 799 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~ 878 (1412)
.... +..+..++++|+++.+. .+|+|+|++|++||+++|+||||||||||+++|+|...
T Consensus 256 ~~~~------~~~~~~l~~~~l~~~~~---------------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~ 314 (510)
T PRK09700 256 NVSN------LAHETVFEVRNVTSRDR---------------KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDK 314 (510)
T ss_pred cccc------CCCCcEEEEeCccccCC---------------CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc
Confidence 0000 00012478999986431 27999999999999999999999999999999999765
Q ss_pred CCeEEEEEEEcCccCCcc----cccceEEEeccC---CCCCCCCCHHHHHHHHHHhc---CCC--C-CCHHHHHHHHHHH
Q 000576 879 TGYVTGNITISGYPKKQE----TFARISGYCEQN---DIHSPQVTVYESLLYSAWLR---LSP--E-VDSKTRKMFIEEV 945 (1412)
Q Consensus 879 ~~~~~G~i~i~g~~~~~~----~~~~~~~yv~Q~---~~~~~~lTv~E~l~f~a~lr---~~~--~-~~~~~~~~~v~~~ 945 (1412)
+ .+|+|.++|.++... ..++.+||++|+ ..+++.+||+|++.+....+ ... . ......++.++++
T Consensus 315 p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (510)
T PRK09700 315 R--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQ 392 (510)
T ss_pred C--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHH
Confidence 4 479999999875321 234568999998 45788999999998653211 000 0 1122233557889
Q ss_pred HHHcCCc-hhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEec
Q 000576 946 MELVELN-LLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 1024 (1412)
Q Consensus 946 l~~l~l~-~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H 1024 (1412)
++.+++. +..+..+ ..|||||||||+|||+|+.+|+||+|||||+|||+.+...+++.|++++++|.|||+++|
T Consensus 393 l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsH 467 (510)
T PRK09700 393 RELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSS 467 (510)
T ss_pred HHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 9999996 5556554 479999999999999999999999999999999999999999999999878999999999
Q ss_pred CCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 1025 QPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1025 qp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
++. .+.+.||++++|++ |++++.++.
T Consensus 468 d~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 468 ELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred CHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 986 57889999999986 799988875
No 24
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2e-64 Score=628.55 Aligned_cols=453 Identities=20% Similarity=0.312 Sum_probs=348.7
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCCCc
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHDVH 238 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~ 238 (1412)
++++++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 14 ~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~ 90 (501)
T PRK10762 14 FPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNL 90 (501)
T ss_pred eCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhc
Confidence 33456999999999999999999999999999999999999987 7999999988754321 3469999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++.+||+||+.++.........+ +. .+....++++++.+||++..|..++
T Consensus 91 ~~~~tv~e~l~~~~~~~~~~~~~-------------------~~-----------~~~~~~~~~~l~~~~l~~~~~~~~~ 140 (501)
T PRK10762 91 IPQLTIAENIFLGREFVNRFGRI-------------------DW-----------KKMYAEADKLLARLNLRFSSDKLVG 140 (501)
T ss_pred cCCCcHHHHhhhccccccccCcc-------------------CH-----------HHHHHHHHHHHHHcCCCCCccCchh
Confidence 99999999999864321000000 00 0112235678999999887766554
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.++||+|++
T Consensus 141 -----~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~~~tvii~sHd~~~~~~~~d~i~~ 213 (501)
T PRK10762 141 -----ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS--QGRGIVYISHRLKEIFEICDDVTV 213 (501)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEE
Confidence 6999999999999999999999999999999999999999999999854 366777799999999999999999
Q ss_pred EeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhhhhh
Q 000576 399 ISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQILGDE 478 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1412)
|++|+++..|+.+++.. ++..+.+
T Consensus 214 l~~G~i~~~~~~~~~~~--------------------------------------------~~~~~~~------------ 237 (501)
T PRK10762 214 FRDGQFIAEREVADLTE--------------------------------------------DSLIEMM------------ 237 (501)
T ss_pred EeCCEEEEecCcCcCCH--------------------------------------------HHHHHHh------------
Confidence 99999998776543210 0000000
Q ss_pred hCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccchhh
Q 000576 479 LGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDGVIY 558 (1412)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~~~~ 558 (1412)
+. .
T Consensus 238 ----------------------------------------------------------------~~-----~-------- 240 (501)
T PRK10762 238 ----------------------------------------------------------------VG-----R-------- 240 (501)
T ss_pred ----------------------------------------------------------------cC-----C--------
Confidence 00 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHHHHH
Q 000576 559 AGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAGRFF 638 (1412)
Q Consensus 559 ~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~~ff 638 (1412)
+
T Consensus 241 --------------------------------~----------------------------------------------- 241 (501)
T PRK10762 241 --------------------------------K----------------------------------------------- 241 (501)
T ss_pred --------------------------------C-----------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHHHhc
Q 000576 639 RQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVNEFL 718 (1412)
Q Consensus 639 ~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~nef~ 718 (1412)
.+
T Consensus 242 -----------------------------------------------------~~------------------------- 243 (501)
T PRK10762 242 -----------------------------------------------------LE------------------------- 243 (501)
T ss_pred -----------------------------------------------------cc-------------------------
Confidence 00
Q ss_pred CCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccc
Q 000576 719 GHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSLETITEA 798 (1412)
Q Consensus 719 ~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 798 (1412)
. .. +
T Consensus 244 --~---~~----------------------------------------------------------------~------- 247 (501)
T PRK10762 244 --D---QY----------------------------------------------------------------P------- 247 (501)
T ss_pred --c---cc----------------------------------------------------------------c-------
Confidence 0 00 0
Q ss_pred CCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC
Q 000576 799 NQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT 878 (1412)
Q Consensus 799 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~ 878 (1412)
... .+..+..++++|++. .+|+|+|++|++||+++|+||||||||||+++|+|...
T Consensus 248 ~~~------~~~~~~~l~~~~l~~------------------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~ 303 (501)
T PRK10762 248 RLD------KAPGEVRLKVDNLSG------------------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALP 303 (501)
T ss_pred ccc------cCCCCcEEEEeCccc------------------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCC
Confidence 000 000012467888762 26899999999999999999999999999999999765
Q ss_pred CCeEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHHHHHHHHHHhcCC---CCCCHHHHHHHHHHHHHH
Q 000576 879 TGYVTGNITISGYPKKQE----TFARISGYCEQND---IHSPQVTVYESLLYSAWLRLS---PEVDSKTRKMFIEEVMEL 948 (1412)
Q Consensus 879 ~~~~~G~i~i~g~~~~~~----~~~~~~~yv~Q~~---~~~~~lTv~E~l~f~a~lr~~---~~~~~~~~~~~v~~~l~~ 948 (1412)
+ .+|+|.++|.++... ..++.+||++|++ .+++.+||.|++.+....... ......+.++.++++++.
T Consensus 304 p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 381 (501)
T PRK10762 304 R--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRL 381 (501)
T ss_pred C--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHh
Confidence 4 479999999875421 2345689999995 477889999999875321110 011223334568899999
Q ss_pred cCCc-hhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCc
Q 000576 949 VELN-LLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1027 (1412)
Q Consensus 949 l~l~-~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~ 1027 (1412)
+++. +..+..+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++.
T Consensus 382 ~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~ 456 (501)
T PRK10762 382 FNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP 456 (501)
T ss_pred cCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 9994 4555543 479999999999999999999999999999999999999999999999878999999999987
Q ss_pred HHHHHhhccEeEEecCcEEEEEcCCCC
Q 000576 1028 IDIFEAFDELFLLKRGGQEIYVGPLGR 1054 (1412)
Q Consensus 1028 ~~i~~~fD~v~ll~~gG~~~y~G~~~~ 1054 (1412)
.+.+.||++++|++ |++++.|+...
T Consensus 457 -~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 457 -EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred -HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 57889999999985 89999998753
No 25
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1e-63 Score=682.65 Aligned_cols=210 Identities=20% Similarity=0.257 Sum_probs=177.6
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++|+||+++|+. +.+.+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 46999999999952 22469999999999999999999999999999999999754 37999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh-------hcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR-------QALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~vg~~ 962 (1412)
+.+ ..+++.++|+||++.+++. |+||||... ...+ ++.++++++.+++.+.. |+.+|.
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~------~~~t----deei~~aL~~~~L~~~i~~lp~GLdt~v~e- 1349 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPY------EQWS----DEEIWKVAEEVGLKSVIEQFPDKLDFVLVD- 1349 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCcc------cCCC----HHHHHHHHHHCCCHHHHHhCcccccccccc-
Confidence 764 4567889999999999875 999999421 1122 34578889988886543 444554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
++.+||||||||+||||||+++|+||+||||||+||..++..|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1350 ~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1350 GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 345799999999999999999999999999999999999999999999875 4799999999986 4567999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|+++.+|++
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 899999986
No 26
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-63 Score=633.57 Aligned_cols=490 Identities=21% Similarity=0.250 Sum_probs=353.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCC----------CcC------c-cce
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMD----------EFV------P-QRT 228 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----------~~~------~-~~~ 228 (1412)
.++|+||||++++||+++|+||||||||||+++|+|.++|+ +|+|.++|..+. ... . .+.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999886 799999986431 111 1 136
Q ss_pred EEEEcCCC--CcCCCCCHHHHHHHhhhhc-CCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHH
Q 000576 229 AAYISQHD--VHIGEMTVRETLAFSARCQ-GVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILK 305 (1412)
Q Consensus 229 ~~yv~Q~d--~~~~~lTV~e~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 305 (1412)
+|||+|++ .+++.+||+||+.++.+.. +.. ..+....++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------------------------------REEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHH
Confidence 99999986 5778899999999975432 110 0011234567899
Q ss_pred HhCCCccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecC
Q 000576 306 ILGLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQP 385 (1412)
Q Consensus 306 ~lgL~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~ 385 (1412)
.+||++.. . .-++.+..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++. .+++|+.++|+
T Consensus 152 ~~gL~~~~-~-~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~-~g~tvi~itHd 228 (623)
T PRK10261 152 QVRIPEAQ-T-ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKE-MSMGVIFITHD 228 (623)
T ss_pred HCCCCChh-h-HHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHh-cCCEEEEEcCC
Confidence 99996421 0 113345579999999999999999999999999999999999999999999998753 35677779999
Q ss_pred hhhHHhhcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHH
Q 000576 386 APEAYDLFDDIILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADA 465 (1412)
Q Consensus 386 ~~~~~~~~D~vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (1412)
..++.+++|+|++|++|++++.|+++++.+ .|.+....+++. .
T Consensus 229 l~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~~-----------------------------~ 271 (623)
T PRK10261 229 MGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALLA-----------------------------A 271 (623)
T ss_pred HHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhhh-----------------------------c
Confidence 999999999999999999999998876531 010000000000 0
Q ss_pred HHhcchhhhhhhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHccc
Q 000576 466 FQSFSVGQILGDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRT 545 (1412)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~ 545 (1412)
.+. . ....
T Consensus 272 ---------------~~~--~----~~~~--------------------------------------------------- 279 (623)
T PRK10261 272 ---------------VPQ--L----GAMK--------------------------------------------------- 279 (623)
T ss_pred ---------------cCc--c----cccc---------------------------------------------------
Confidence 000 0 0000
Q ss_pred CCCCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhh
Q 000576 546 KMHRDSVTDGVIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTY 625 (1412)
Q Consensus 546 ~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y 625 (1412)
. .. .. . + . |
T Consensus 280 ~--~~-~~-~-----------------------------------~----~--------------~-------------- 288 (623)
T PRK10261 280 G--LD-YP-R-----------------------------------R----F--------------P-------------- 288 (623)
T ss_pred c--cc-CC-c-----------------------------------c----c--------------c--------------
Confidence 0 00 00 0 0 0 0
Q ss_pred hccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHH
Q 000576 626 YVIGFDPNAGRFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPL 705 (1412)
Q Consensus 626 ~~~g~~~~~~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~ 705 (1412)
. .
T Consensus 289 ---------------------------------------------------------------~--~------------- 290 (623)
T PRK10261 289 ---------------------------------------------------------------L--I------------- 290 (623)
T ss_pred ---------------------------------------------------------------c--c-------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHhcCCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhccccccccccc
Q 000576 706 MYAQNAIMVNEFLGHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRR 785 (1412)
Q Consensus 706 ~ya~~al~~nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~ 785 (1412)
. ...+ .. .
T Consensus 291 --------------~--~~~~--~~----------------------------------------------------~-- 298 (623)
T PRK10261 291 --------------S--LEHP--AK----------------------------------------------------Q-- 298 (623)
T ss_pred --------------c--cccc--cc----------------------------------------------------c--
Confidence 0 0000 00 0
Q ss_pred cccccccccccccCCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCC
Q 000576 786 DSSSQSLETITEANQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAG 865 (1412)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaG 865 (1412)
.+.. .. . . .+.....++++||++.|+..... . ......+.+|+||||+|++||++||+|+||||
T Consensus 299 ----~~~~-~~--~-~------~~~~~~~L~~~~l~~~y~~~~~~-~-~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsG 362 (623)
T PRK10261 299 ----EPPI-EQ--D-T------VVDGEPILQVRNLVTRFPLRSGL-L-NRVTREVHAVEKVSFDLWPGETLSLVGESGSG 362 (623)
T ss_pred ----Cccc-cc--c-c------ccCCCceEEEeeeEEEEcCCCcc-c-cccCCceEEEeeeEeEEcCCCEEEEECCCCCC
Confidence 0000 00 0 0 00001248999999888421000 0 00001246999999999999999999999999
Q ss_pred hhhHHhhhcCCCCCCeEEEEEEEcCccCCcc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHH
Q 000576 866 KTTLMDVLAGRKTTGYVTGNITISGYPKKQE------TFARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKT 937 (1412)
Q Consensus 866 KTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~ 937 (1412)
||||+++|+|...+ .+|+|.++|.++... .+++.++|++|++ .+++.+||.|++.+...... ....++
T Consensus 363 KSTLlk~i~Gl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~ 438 (623)
T PRK10261 363 KSTTGRALLRLVES--QGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKA 438 (623)
T ss_pred HHHHHHHHHcCCCC--CCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHH
Confidence 99999999997654 479999999875321 2355799999986 47889999999987643321 112334
Q ss_pred HHHHHHHHHHHcCCc-hhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-
Q 000576 938 RKMFIEEVMELVELN-LLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT- 1015 (1412)
Q Consensus 938 ~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~- 1015 (1412)
.++.+.++++.++|. ...+..+ ..|||||||||+|||+|+.+|++|||||||+|||..++..+++.|++++++
T Consensus 439 ~~~~~~~~L~~~gL~~~~~~~~~-----~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~ 513 (623)
T PRK10261 439 AAARVAWLLERVGLLPEHAWRYP-----HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDF 513 (623)
T ss_pred HHHHHHHHHHHcCCCHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc
Confidence 456788999999995 4555543 479999999999999999999999999999999999999999999999765
Q ss_pred CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 1016 GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1016 g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|.|||++||+++ .+.+.+|++++|++ |++++.|+.
T Consensus 514 g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~ 548 (623)
T PRK10261 514 GIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPR 548 (623)
T ss_pred CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 899999999987 57788999999985 899999986
No 27
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.6e-63 Score=623.72 Aligned_cols=449 Identities=21% Similarity=0.306 Sum_probs=345.5
Q ss_pred ccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCC--CCCCCceeEEEECC----------------------
Q 000576 162 RKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKL--DSSLRLYGRVTYNG---------------------- 217 (1412)
Q Consensus 162 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G---------------------- 217 (1412)
+++++++|+|+|+++.+|++++|+|||||||||||++|+|.+ .|+ +|+|.++|
T Consensus 9 ~~~~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~ 85 (520)
T TIGR03269 9 KFDGKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVC 85 (520)
T ss_pred EECCeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccc
Confidence 344557999999999999999999999999999999999996 565 79999972
Q ss_pred -ccCC-------Cc------CccceEEEEcCC-CCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCCh
Q 000576 218 -HNMD-------EF------VPQRTAAYISQH-DVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDL 282 (1412)
Q Consensus 218 -~~~~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 282 (1412)
.++. .. ..++.++|++|+ +.+++.+||+||+.|+....+.. .
T Consensus 86 g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~-~---------------------- 142 (520)
T TIGR03269 86 GGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYE-G---------------------- 142 (520)
T ss_pred cccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCC-H----------------------
Confidence 2211 00 013568999997 67788899999999865332210 0
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHH
Q 000576 283 DVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQ 362 (1412)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~ 362 (1412)
.+....++++++.+||++..+..+ ..|||||||||+||+||+.+|++|||||||+|||+.++..
T Consensus 143 -----------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~ 206 (520)
T TIGR03269 143 -----------KEAVGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKL 206 (520)
T ss_pred -----------HHHHHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHH
Confidence 011234567899999987666544 4799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchh
Q 000576 363 IVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKD 442 (1412)
Q Consensus 363 i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~ 442 (1412)
+.+.|+++++. .+++|++++|+...+.++||+|++|++|++++.|+++++.+.+.
T Consensus 207 l~~~l~~l~~~-~g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~------------------------ 261 (520)
T TIGR03269 207 VHNALEEAVKA-SGISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFM------------------------ 261 (520)
T ss_pred HHHHHHHHHHh-cCcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHH------------------------
Confidence 99999998653 35677779999999999999999999999998876654311000
Q ss_pred hhhhhhcCCCCCccCCHhHHHHHHHhcchhhhhhhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchH
Q 000576 443 QEQYWANKEEPYRFVTVKEFADAFQSFSVGQILGDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSF 522 (1412)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~ 522 (1412)
.
T Consensus 262 ------------------------~------------------------------------------------------- 262 (520)
T TIGR03269 262 ------------------------E------------------------------------------------------- 262 (520)
T ss_pred ------------------------h-------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHH
Q 000576 523 VYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDGVIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYA 602 (1412)
Q Consensus 523 ~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~ 602 (1412)
..
T Consensus 263 -------------------------------~~----------------------------------------------- 264 (520)
T TIGR03269 263 -------------------------------GV----------------------------------------------- 264 (520)
T ss_pred -------------------------------hc-----------------------------------------------
Confidence 00
Q ss_pred HHhHhhhhhHHHHHHHHHHhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Q 000576 603 FPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAGRFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYAL 682 (1412)
Q Consensus 603 l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~ 682 (1412)
..
T Consensus 265 ------------------------------------------------------------~~------------------ 266 (520)
T TIGR03269 265 ------------------------------------------------------------SE------------------ 266 (520)
T ss_pred ------------------------------------------------------------hh------------------
Confidence 00
Q ss_pred hcccccccChhhHHHHHHHHcHHHHHHHHHHHHHhcCCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHH
Q 000576 683 GGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVNEFLGHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFII 762 (1412)
Q Consensus 683 ~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~ 762 (1412)
+.. .
T Consensus 267 ---------~~~-------------------------------~------------------------------------ 270 (520)
T TIGR03269 267 ---------VEK-------------------------------E------------------------------------ 270 (520)
T ss_pred ---------hcc-------------------------------c------------------------------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHhccccccccccccccccccccccccCCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceee
Q 000576 763 LFNIGFALALSFLNWSADDIRRRDSSSQSLETITEANQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVL 842 (1412)
Q Consensus 763 ~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i 842 (1412)
. ..+ .....++++|++++|+.. ..+.+.+
T Consensus 271 ---------------------------------~--~~~--------~~~~~l~~~~l~~~~~~~--------~~~~~~i 299 (520)
T TIGR03269 271 ---------------------------------C--EVE--------VGEPIIKVRNVSKRYISV--------DRGVVKA 299 (520)
T ss_pred ---------------------------------c--ccC--------CCCceEEEeccEEEeccC--------CCCCceE
Confidence 0 000 001147899999887410 0122469
Q ss_pred ecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEc-Ccc---CCc------ccccceEEEeccCCCCC
Q 000576 843 LNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITIS-GYP---KKQ------ETFARISGYCEQNDIHS 912 (1412)
Q Consensus 843 L~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~-g~~---~~~------~~~~~~~~yv~Q~~~~~ 912 (1412)
|+|+||+|++||++||+||||||||||+++|+|...+ .+|+|.++ |.+ ... ...++.++|++|++.++
T Consensus 300 l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~ 377 (520)
T TIGR03269 300 VDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEP--TSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLY 377 (520)
T ss_pred EeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccC
Confidence 9999999999999999999999999999999997653 47999996 532 111 12245689999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch-----hhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcE
Q 000576 913 PQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL-----LRQALVGLPGVNGLSTEQRKRLTIAVELVANPSI 987 (1412)
Q Consensus 913 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-----~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~i 987 (1412)
+.+||.|++.+...+. ......++.++++++.+++.+ ..+.. +..|||||||||+|||+|+.+|++
T Consensus 378 ~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LSgGq~qrv~laral~~~p~l 448 (520)
T TIGR03269 378 PHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELSEGERHRVALAQVLIKEPRI 448 (520)
T ss_pred CCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999998754321 122333456788999999964 23433 347999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 988 IFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 988 lllDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|+|||||+|||+.+...+++.|++++++ |.|||+++|++. .+.+.||++++|++ |+++..|++
T Consensus 449 LllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 449 VILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GKIVKIGDP 512 (520)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999999999999764 899999999987 57788999999985 799998875
No 28
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.3e-63 Score=621.70 Aligned_cols=455 Identities=20% Similarity=0.286 Sum_probs=346.0
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCCCcC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHDVHI 239 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 239 (1412)
+++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.++
T Consensus 22 ~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (510)
T PRK15439 22 SGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLF 98 (510)
T ss_pred CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccC
Confidence 3456999999999999999999999999999999999999887 7999999988754332 24699999998889
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
+.+||+||+.|+.... + +....++++++.+||++..+..++
T Consensus 99 ~~~tv~e~l~~~~~~~------~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~- 139 (510)
T PRK15439 99 PNLSVKENILFGLPKR------Q--------------------------------ASMQKMKQLLAALGCQLDLDSSAG- 139 (510)
T ss_pred CCCcHHHHhhcccccc------h--------------------------------HHHHHHHHHHHHcCCCccccCChh-
Confidence 9999999998853110 0 011234568899999877766554
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+++|+.++|+..++.++||+|++|
T Consensus 140 ----~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiiivtHd~~~~~~~~d~i~~l 213 (510)
T PRK15439 140 ----SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA--QGVGIVFISHKLPEIRQLADRISVM 213 (510)
T ss_pred ----hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 6999999999999999999999999999999999999999999999865 3667777999999999999999999
Q ss_pred eCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhhhhhh
Q 000576 400 SDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQILGDEL 479 (1412)
Q Consensus 400 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1412)
++|++++.|+++++... +.. +.+..
T Consensus 214 ~~G~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~~----------- 238 (510)
T PRK15439 214 RDGTIALSGKTADLSTD---------------DII-----------------------------QAITP----------- 238 (510)
T ss_pred ECCEEEEecChHHcCHH---------------HHH-----------------------------HHHhC-----------
Confidence 99999999987664210 000 00000
Q ss_pred CCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccchhhh
Q 000576 480 GIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDGVIYA 559 (1412)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~~~~~ 559 (1412)
. ... .. ....
T Consensus 239 -~-----~~~-------------------------------------------------------~~-----~~~~---- 248 (510)
T PRK15439 239 -A-----ARE-------------------------------------------------------KS-----LSAS---- 248 (510)
T ss_pred -c-----ccc-------------------------------------------------------cc-----cccc----
Confidence 0 000 00 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHHHHHH
Q 000576 560 GATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAGRFFR 639 (1412)
Q Consensus 560 g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~~ff~ 639 (1412)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHHHhcC
Q 000576 640 QYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVNEFLG 719 (1412)
Q Consensus 640 ~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~nef~~ 719 (1412)
..
T Consensus 249 -----------------------------------------------------~~------------------------- 250 (510)
T PRK15439 249 -----------------------------------------------------QK------------------------- 250 (510)
T ss_pred -----------------------------------------------------cc-------------------------
Confidence 00
Q ss_pred CcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccccC
Q 000576 720 HSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSLETITEAN 799 (1412)
Q Consensus 720 ~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1412)
.. ..+ + . .. ..
T Consensus 251 --~~-----------------~~~---------------------------------~-------------~---~~-~~ 261 (510)
T PRK15439 251 --LW-----------------LEL---------------------------------P-------------G---NR-RQ 261 (510)
T ss_pred --cc-----------------ccc---------------------------------c-------------c---cc-cc
Confidence 00 000 0 0 00 00
Q ss_pred CccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC
Q 000576 800 QPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT 879 (1412)
Q Consensus 800 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~ 879 (1412)
. +..+..++++|++. .+|+|||+++++||++||+||||||||||+++|+|...+
T Consensus 262 ~--------~~~~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p 315 (510)
T PRK15439 262 Q--------AAGAPVLTVEDLTG------------------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPA 315 (510)
T ss_pred c--------CCCCceEEEeCCCC------------------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC
Confidence 0 00112477888872 158999999999999999999999999999999997554
Q ss_pred CeEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc
Q 000576 880 GYVTGNITISGYPKKQE----TFARISGYCEQND---IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN 952 (1412)
Q Consensus 880 ~~~~G~i~i~g~~~~~~----~~~~~~~yv~Q~~---~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~ 952 (1412)
.+|+|.++|.++... ..++.++|++|+. .+++.+|+.|++......+..........++.++++++.+++.
T Consensus 316 --~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 393 (510)
T PRK15439 316 --RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIK 393 (510)
T ss_pred --CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCC
Confidence 379999999875431 1234689999974 4778899999986421111110011122335678999999996
Q ss_pred -hhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHH
Q 000576 953 -LLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1031 (1412)
Q Consensus 953 -~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~ 1031 (1412)
+..+..+ ..|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++++.|.|||+++|++. ++.
T Consensus 394 ~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~ 467 (510)
T PRK15439 394 FNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE-EIE 467 (510)
T ss_pred CCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHH
Confidence 5555543 479999999999999999999999999999999999999999999999888999999999987 588
Q ss_pred HhhccEeEEecCcEEEEEcCCC
Q 000576 1032 EAFDELFLLKRGGQEIYVGPLG 1053 (1412)
Q Consensus 1032 ~~fD~v~ll~~gG~~~y~G~~~ 1053 (1412)
+.||++++|++ |++++.|.++
T Consensus 468 ~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 468 QMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred HhCCEEEEEEC-CEEEEEEccc
Confidence 89999999985 8999888764
No 29
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.7e-63 Score=624.46 Aligned_cols=464 Identities=22% Similarity=0.291 Sum_probs=348.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCC--CCceeEEEECCccCCCcCc-------cceEEEEcCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRLYGRVTYNGHNMDEFVP-------QRTAAYISQHD 236 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 236 (1412)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|+++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 46999999999999999999999999999999999999862 0137999999998754321 14699999985
Q ss_pred C--cCCCCCHHHHHHHhhhhc-CCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcc-
Q 000576 237 V--HIGEMTVRETLAFSARCQ-GVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVC- 312 (1412)
Q Consensus 237 ~--~~~~lTV~e~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~- 312 (1412)
. +.+.+||+|++.+..... +.. ..+....++++++.+||++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------------------------------REAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHCCCCChH
Confidence 3 567789999987653211 100 00112345678999999752
Q ss_pred --ccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 000576 313 --ADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAY 390 (1412)
Q Consensus 313 --~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~ 390 (1412)
.|.. +..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+.+||+++|+..++.
T Consensus 148 ~~~~~~-----~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDY-----PHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQE-LNMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhC-----CcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHh-cCCeEEEEcCcHHHHH
Confidence 3444 4479999999999999999999999999999999999999999999998653 3567777999999999
Q ss_pred hhcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcc
Q 000576 391 DLFDDIILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFS 470 (1412)
Q Consensus 391 ~~~D~vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (1412)
+++|+|++|++|++++.|+++++... |. . ..
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~-------------------------~--------~~-------- 252 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PT-------------------------H--------PY-------- 252 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CC-------------------------C--------HH--------
Confidence 99999999999999999887654210 00 0 00
Q ss_pred hhhhhhhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCC
Q 000576 471 VGQILGDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRD 550 (1412)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~ 550 (1412)
.+.+ +...
T Consensus 253 ----------------------------------------~~~~----------------------------~~~~---- 260 (529)
T PRK15134 253 ----------------------------------------TQKL----------------------------LNSE---- 260 (529)
T ss_pred ----------------------------------------HHHH----------------------------HHhC----
Confidence 0000 0000
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhcccc
Q 000576 551 SVTDGVIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGF 630 (1412)
Q Consensus 551 ~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~ 630 (1412)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHH
Q 000576 631 DPNAGRFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQN 710 (1412)
Q Consensus 631 ~~~~~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~ 710 (1412)
+.
T Consensus 261 --------------------------------------------------------------~~---------------- 262 (529)
T PRK15134 261 --------------------------------------------------------------PS---------------- 262 (529)
T ss_pred --------------------------------------------------------------cc----------------
Confidence 00
Q ss_pred HHHHHHhcCCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcccccccccccccccc
Q 000576 711 AIMVNEFLGHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQ 790 (1412)
Q Consensus 711 al~~nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~ 790 (1412)
..
T Consensus 263 ---------~~--------------------------------------------------------------------- 264 (529)
T PRK15134 263 ---------GD--------------------------------------------------------------------- 264 (529)
T ss_pred ---------cc---------------------------------------------------------------------
Confidence 00
Q ss_pred ccccccccCCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHH
Q 000576 791 SLETITEANQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLM 870 (1412)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl 870 (1412)
+ .. ... + .+..++++|+++.|+..... .. ...+.+.+|+|||++|++||++||+||||||||||+
T Consensus 265 ~---~~--~~~-------~-~~~~l~~~~l~~~~~~~~~~-~~-~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl 329 (529)
T PRK15134 265 P---VP--LPE-------P-ASPLLDVEQLQVAFPIRKGI-LK-RTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTG 329 (529)
T ss_pred c---cc--cCC-------C-CCCcccccCcEEEeecCccc-cc-cccccceeeecceeEEcCCCEEEEECCCCCCHHHHH
Confidence 0 00 000 0 01137788998877421000 00 000124699999999999999999999999999999
Q ss_pred hhhcCCCCCCeEEEEEEEcCccCCcc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHH
Q 000576 871 DVLAGRKTTGYVTGNITISGYPKKQE------TFARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFI 942 (1412)
Q Consensus 871 ~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v 942 (1412)
++|+|... .+|+|.++|.++... .+++.++|++|+. .+++.+||.|++.+....+.. .....+.++.+
T Consensus 330 k~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~ 405 (529)
T PRK15134 330 LALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQP-TLSAAQREQQV 405 (529)
T ss_pred HHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccc-cCChHHHHHHH
Confidence 99999753 379999999875321 1245689999986 477889999999886533211 12233445668
Q ss_pred HHHHHHcCCc-hhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEE
Q 000576 943 EEVMELVELN-LLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVV 1020 (1412)
Q Consensus 943 ~~~l~~l~l~-~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi 1020 (1412)
+++++.+++. +..+..+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||
T Consensus 406 ~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi 480 (529)
T PRK15134 406 IAVMEEVGLDPETRHRYP-----AEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYL 480 (529)
T ss_pred HHHHHHcCCCHHHHhcCC-----ccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEE
Confidence 8999999996 3555443 479999999999999999999999999999999999999999999999865 89999
Q ss_pred EEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 1021 CTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1021 ~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
+++|++. .+.+.||++++|++ |+++..|+.
T Consensus 481 ~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 481 FISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred EEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 9999986 57788999999985 799998875
No 30
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.4e-63 Score=618.44 Aligned_cols=463 Identities=20% Similarity=0.274 Sum_probs=348.8
Q ss_pred ccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCCC
Q 000576 162 RKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHDV 237 (1412)
Q Consensus 162 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~ 237 (1412)
+++++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ ..+|+|.++|+++..... ++.++||+|++.
T Consensus 10 ~~~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~ 88 (500)
T TIGR02633 10 TFGGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELT 88 (500)
T ss_pred EeCCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccc
Confidence 344557999999999999999999999999999999999998761 127999999998765332 246999999988
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccc-ccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCA-DTM 316 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~-dt~ 316 (1412)
+++.+||+||+.++......+...+ ..+....++.+++.+||++.. ++.
T Consensus 89 ~~~~~tv~~~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~ 138 (500)
T TIGR02633 89 LVPELSVAENIFLGNEITLPGGRMA------------------------------YNAMYLRAKNLLRELQLDADNVTRP 138 (500)
T ss_pred cCCCCcHHHHHHhhccccccccccC------------------------------HHHHHHHHHHHHHHcCCCCCcccCc
Confidence 8899999999988643210000000 001122456789999997654 333
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
+ ..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+++|+.++|+..++.++||+|
T Consensus 139 ~-----~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~g~tviiitHd~~~~~~~~d~i 211 (500)
T TIGR02633 139 V-----GDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA--HGVACVYISHKLNEVKAVCDTI 211 (500)
T ss_pred h-----hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCcHHHHHHhCCEE
Confidence 4 46999999999999999999999999999999999999999999999864 3667777999999999999999
Q ss_pred EEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhhh
Q 000576 397 ILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQILG 476 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1412)
++|++|++++.|+.+++.. .+..+.
T Consensus 212 ~~l~~G~i~~~~~~~~~~~--------------------------------------------~~~~~~----------- 236 (500)
T TIGR02633 212 CVIRDGQHVATKDMSTMSE--------------------------------------------DDIITM----------- 236 (500)
T ss_pred EEEeCCeEeeecCcccCCH--------------------------------------------HHHHHH-----------
Confidence 9999999987664321100 000000
Q ss_pred hhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccch
Q 000576 477 DELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDGV 556 (1412)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~~ 556 (1412)
+.
T Consensus 237 -----------------------------------------------------------------~~------------- 238 (500)
T TIGR02633 237 -----------------------------------------------------------------MV------------- 238 (500)
T ss_pred -----------------------------------------------------------------Hh-------------
Confidence 00
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHHH
Q 000576 557 IYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAGR 636 (1412)
Q Consensus 557 ~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~~ 636 (1412)
+.
T Consensus 239 ------------------------------------------------------------------------~~------ 240 (500)
T TIGR02633 239 ------------------------------------------------------------------------GR------ 240 (500)
T ss_pred ------------------------------------------------------------------------Cc------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHHH
Q 000576 637 FFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVNE 716 (1412)
Q Consensus 637 ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~ne 716 (1412)
..+.
T Consensus 241 ------------------------------------------------------~~~~---------------------- 244 (500)
T TIGR02633 241 ------------------------------------------------------EITS---------------------- 244 (500)
T ss_pred ------------------------------------------------------cccc----------------------
Confidence 0000
Q ss_pred hcCCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccc
Q 000576 717 FLGHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSLETIT 796 (1412)
Q Consensus 717 f~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~ 796 (1412)
.. +
T Consensus 245 --------~~----------------------------------------------------------------~----- 247 (500)
T TIGR02633 245 --------LY----------------------------------------------------------------P----- 247 (500)
T ss_pred --------cc----------------------------------------------------------------c-----
Confidence 00 0
Q ss_pred ccCCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCC
Q 000576 797 EANQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGR 876 (1412)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~ 876 (1412)
...... .+..++++|+++.++. .+++.+|+|+|+++++||++||+||||||||||+++|+|.
T Consensus 248 ~~~~~~--------~~~~l~~~~l~~~~~~----------~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~ 309 (500)
T TIGR02633 248 HEPHEI--------GDVILEARNLTCWDVI----------NPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGA 309 (500)
T ss_pred ccccCC--------CCceEEEeCCcccccc----------cccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCC
Confidence 000000 0114789999876521 0123589999999999999999999999999999999997
Q ss_pred CCCCeEEEEEEEcCccCCc----ccccceEEEeccCC---CCCCCCCHHHHHHHHHH--hcCCCCCCHHHHHHHHHHHHH
Q 000576 877 KTTGYVTGNITISGYPKKQ----ETFARISGYCEQND---IHSPQVTVYESLLYSAW--LRLSPEVDSKTRKMFIEEVME 947 (1412)
Q Consensus 877 ~~~~~~~G~i~i~g~~~~~----~~~~~~~~yv~Q~~---~~~~~lTv~E~l~f~a~--lr~~~~~~~~~~~~~v~~~l~ 947 (1412)
.++ ..+|+|.++|.++.. ...++.+||++|+. .+++.+||+|++.+... ............++.++++++
T Consensus 310 ~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 388 (500)
T TIGR02633 310 YPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQ 388 (500)
T ss_pred CCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHH
Confidence 642 137999999987642 12345689999995 57889999999987532 111011122334456889999
Q ss_pred HcCCch-hhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCC
Q 000576 948 LVELNL-LRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQP 1026 (1412)
Q Consensus 948 ~l~l~~-~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp 1026 (1412)
.+++.+ ..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|.|||++||++
T Consensus 389 ~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~ 463 (500)
T TIGR02633 389 RLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSEL 463 (500)
T ss_pred hcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCH
Confidence 999963 345443 47999999999999999999999999999999999999999999999988899999999998
Q ss_pred cHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 1027 SIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1027 ~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
+ ++.+.||++++|++ |+++..++.
T Consensus 464 ~-~~~~~~d~v~~l~~-G~i~~~~~~ 487 (500)
T TIGR02633 464 A-EVLGLSDRVLVIGE-GKLKGDFVN 487 (500)
T ss_pred H-HHHHhCCEEEEEEC-CEEEEEEcc
Confidence 7 57889999999985 789888765
No 31
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-63 Score=616.11 Aligned_cols=453 Identities=21% Similarity=0.298 Sum_probs=344.8
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCCCcC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHDVHI 239 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 239 (1412)
+++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.++
T Consensus 15 ~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~ 91 (501)
T PRK11288 15 PGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLV 91 (501)
T ss_pred CCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhcc
Confidence 3456999999999999999999999999999999999999887 7999999988753321 35799999998889
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
+.+||+||+.++......+. . + ..+....++.+++.+||++..+..+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~-----------------~---~-----------~~~~~~~~~~~l~~~~l~~~~~~~~-- 138 (501)
T PRK11288 92 PEMTVAENLYLGQLPHKGGI-----------------V---N-----------RRLLNYEAREQLEHLGVDIDPDTPL-- 138 (501)
T ss_pred CCCCHHHHHHhcccccccCC-----------------C---C-----------HHHHHHHHHHHHHHcCCCCCcCCch--
Confidence 99999999998632100000 0 0 0011223566899999986666554
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .+++|+.++|+..++.+++|+|++|
T Consensus 139 ---~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiiiitHd~~~~~~~~d~i~~l 213 (501)
T PRK11288 139 ---KYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA--EGRVILYVSHRMEEIFALCDAITVF 213 (501)
T ss_pred ---hhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999854 3667777999999999999999999
Q ss_pred eCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhhhhhh
Q 000576 400 SDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQILGDEL 479 (1412)
Q Consensus 400 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1412)
++|+++..++..+. .+.++..+.+
T Consensus 214 ~~G~i~~~~~~~~~-------------------------------------------~~~~~~~~~~------------- 237 (501)
T PRK11288 214 KDGRYVATFDDMAQ-------------------------------------------VDRDQLVQAM------------- 237 (501)
T ss_pred ECCEEEeecCcccc-------------------------------------------CCHHHHHHHh-------------
Confidence 99999864421000 0000000000
Q ss_pred CCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccchhhh
Q 000576 480 GIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDGVIYA 559 (1412)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~~~~~ 559 (1412)
... .
T Consensus 238 ---------------------------------------------------------------~~~----~--------- 241 (501)
T PRK11288 238 ---------------------------------------------------------------VGR----E--------- 241 (501)
T ss_pred ---------------------------------------------------------------cCC----C---------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHHHHHH
Q 000576 560 GATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAGRFFR 639 (1412)
Q Consensus 560 g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~~ff~ 639 (1412)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHHHhcC
Q 000576 640 QYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVNEFLG 719 (1412)
Q Consensus 640 ~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~nef~~ 719 (1412)
...
T Consensus 242 ----------------------------------------------------~~~------------------------- 244 (501)
T PRK11288 242 ----------------------------------------------------IGD------------------------- 244 (501)
T ss_pred ----------------------------------------------------ccc-------------------------
Confidence 000
Q ss_pred CcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccccC
Q 000576 720 HSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSLETITEAN 799 (1412)
Q Consensus 720 ~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1412)
.. . .. .
T Consensus 245 -~~--------------------------------------------------------------------~---~~--~ 250 (501)
T PRK11288 245 -IY--------------------------------------------------------------------G---YR--P 250 (501)
T ss_pred -cc--------------------------------------------------------------------c---cc--c
Confidence 00 0 00 0
Q ss_pred CccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC
Q 000576 800 QPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT 879 (1412)
Q Consensus 800 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~ 879 (1412)
. +..+..++++|+++. .+++|+|++|++||++||+||||||||||+++|+|...+
T Consensus 251 ~--------~~~~~~l~~~~~~~~-----------------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p 305 (501)
T PRK11288 251 R--------PLGEVRLRLDGLKGP-----------------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRR 305 (501)
T ss_pred c--------CCCCcEEEEeccccC-----------------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcC
Confidence 0 000124778888631 379999999999999999999999999999999997653
Q ss_pred CeEEEEEEEcCccCCc----ccccceEEEeccCC---CCCCCCCHHHHHHHHHHhcCCC-C--CCHHHHHHHHHHHHHHc
Q 000576 880 GYVTGNITISGYPKKQ----ETFARISGYCEQND---IHSPQVTVYESLLYSAWLRLSP-E--VDSKTRKMFIEEVMELV 949 (1412)
Q Consensus 880 ~~~~G~i~i~g~~~~~----~~~~~~~~yv~Q~~---~~~~~lTv~E~l~f~a~lr~~~-~--~~~~~~~~~v~~~l~~l 949 (1412)
.+|+|.++|.++.. ...++.++|++|++ .+++.+|+.|++.+........ . ......++.++++++.+
T Consensus 306 --~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 383 (501)
T PRK11288 306 --TAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSL 383 (501)
T ss_pred --CCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhc
Confidence 47999999987532 12245689999985 4788999999998653211100 0 01222345678899999
Q ss_pred CCc-hhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcH
Q 000576 950 ELN-LLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSI 1028 (1412)
Q Consensus 950 ~l~-~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~ 1028 (1412)
++. +..++.+ ..|||||||||+||++|+.+|++|+|||||+|||+.+...+++.|+++++.|.|||+++||+.
T Consensus 384 ~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~- 457 (501)
T PRK11288 384 NIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP- 457 (501)
T ss_pred CcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-
Confidence 994 5555554 479999999999999999999999999999999999999999999999888999999999987
Q ss_pred HHHHhhccEeEEecCcEEEEEcCCCC
Q 000576 1029 DIFEAFDELFLLKRGGQEIYVGPLGR 1054 (1412)
Q Consensus 1029 ~i~~~fD~v~ll~~gG~~~y~G~~~~ 1054 (1412)
++.+.+|++++|++ |++++.|..++
T Consensus 458 ~~~~~~d~i~~l~~-g~i~~~~~~~~ 482 (501)
T PRK11288 458 EVLGVADRIVVMRE-GRIAGELAREQ 482 (501)
T ss_pred HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 58889999999985 89999998754
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-62 Score=607.84 Aligned_cols=457 Identities=18% Similarity=0.262 Sum_probs=346.2
Q ss_pred cccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcC
Q 000576 159 LSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQ 234 (1412)
Q Consensus 159 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q 234 (1412)
++++++++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|
T Consensus 4 l~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q 80 (491)
T PRK10982 4 ISKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQ 80 (491)
T ss_pred eEEEeCCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEec
Confidence 344455567999999999999999999999999999999999999887 7999999998754322 356999999
Q ss_pred CCCcCCCCCHHHHHHHhhh-hcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccc
Q 000576 235 HDVHIGEMTVRETLAFSAR-CQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCA 313 (1412)
Q Consensus 235 ~d~~~~~lTV~e~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 313 (1412)
++.+++.+||+||+.++.. ..+.. . +. .+....++.+++.+|+++..
T Consensus 81 ~~~~~~~~tv~~~l~~~~~~~~~~~--~-------------------~~-----------~~~~~~~~~~l~~~~l~~~~ 128 (491)
T PRK10982 81 ELNLVLQRSVMDNMWLGRYPTKGMF--V-------------------DQ-----------DKMYRDTKAIFDELDIDIDP 128 (491)
T ss_pred ccccccCCCHHHHhhcccccccccc--c-------------------CH-----------HHHHHHHHHHHHHcCCCCCc
Confidence 9888899999999987531 11000 0 00 01112356688999998776
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000576 314 DTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLF 393 (1412)
Q Consensus 314 dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~ 393 (1412)
++.++ .|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++++ .+.+|+.++|+.+++.++|
T Consensus 129 ~~~~~-----~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~g~tvii~tH~~~~~~~~~ 201 (491)
T PRK10982 129 RAKVA-----TLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE--RGCGIVYISHKMEEIFQLC 201 (491)
T ss_pred cCchh-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHHHHhC
Confidence 65554 6999999999999999999999999999999999999999999999864 3567777999999999999
Q ss_pred CeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhh
Q 000576 394 DDIILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQ 473 (1412)
Q Consensus 394 D~vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1412)
|+|++|++|+++..|+++++.. .+..+.+
T Consensus 202 d~i~~l~~G~i~~~~~~~~~~~--------------------------------------------~~~~~~~------- 230 (491)
T PRK10982 202 DEITILRDGQWIATQPLAGLTM--------------------------------------------DKIIAMM------- 230 (491)
T ss_pred CEEEEEECCEEEeecChhhCCH--------------------------------------------HHHHHHH-------
Confidence 9999999999998876533200 0000000
Q ss_pred hhhhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccc
Q 000576 474 ILGDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVT 553 (1412)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~ 553 (1412)
..
T Consensus 231 ---------------------------------------------------------------------~~--------- 232 (491)
T PRK10982 231 ---------------------------------------------------------------------VG--------- 232 (491)
T ss_pred ---------------------------------------------------------------------hC---------
Confidence 00
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCC
Q 000576 554 DGVIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPN 633 (1412)
Q Consensus 554 ~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~ 633 (1412)
+
T Consensus 233 -------------------------------------~------------------------------------------ 233 (491)
T PRK10982 233 -------------------------------------R------------------------------------------ 233 (491)
T ss_pred -------------------------------------C------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHH
Q 000576 634 AGRFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIM 713 (1412)
Q Consensus 634 ~~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~ 713 (1412)
. ..
T Consensus 234 ------------------------------~---------------------------~~-------------------- 236 (491)
T PRK10982 234 ------------------------------S---------------------------LT-------------------- 236 (491)
T ss_pred ------------------------------C---------------------------cc--------------------
Confidence 0 00
Q ss_pred HHHhcCCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccc
Q 000576 714 VNEFLGHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSLE 793 (1412)
Q Consensus 714 ~nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~ 793 (1412)
..
T Consensus 237 ------~~------------------------------------------------------------------------ 238 (491)
T PRK10982 237 ------QR------------------------------------------------------------------------ 238 (491)
T ss_pred ------cc------------------------------------------------------------------------
Confidence 00
Q ss_pred cccccCCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhh
Q 000576 794 TITEANQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVL 873 (1412)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L 873 (1412)
....... + .+..++++|+++.. +.+|+|||+.+++||++||+||||||||||+++|
T Consensus 239 -~~~~~~~-------~-~~~~i~~~~l~~~~---------------~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l 294 (491)
T PRK10982 239 -FPDKENK-------P-GEVILEVRNLTSLR---------------QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETL 294 (491)
T ss_pred -cccccCC-------C-CCcEEEEeCccccc---------------CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHH
Confidence 0000000 0 11247899998752 1389999999999999999999999999999999
Q ss_pred cCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCCC---CCCCCCHHHHHHHHHH---hcCCCCCCHHHHHHHHH
Q 000576 874 AGRKTTGYVTGNITISGYPKKQE----TFARISGYCEQNDI---HSPQVTVYESLLYSAW---LRLSPEVDSKTRKMFIE 943 (1412)
Q Consensus 874 ~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~yv~Q~~~---~~~~lTv~E~l~f~a~---lr~~~~~~~~~~~~~v~ 943 (1412)
+|...+ .+|+|.++|.++... ..++.++|++|+.. +++.+|+.++..+... ............++.++
T Consensus 295 ~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (491)
T PRK10982 295 FGIREK--SAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQ 372 (491)
T ss_pred cCCCcC--CccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHH
Confidence 997654 479999999876431 12445899999853 5788888877433211 01000011223345678
Q ss_pred HHHHHcCCc-hhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEE
Q 000576 944 EVMELVELN-LLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCT 1022 (1412)
Q Consensus 944 ~~l~~l~l~-~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~ 1022 (1412)
++++.+++. +..+.. +..|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|+++.+.|+|||++
T Consensus 373 ~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~v 447 (491)
T PRK10982 373 WVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIII 447 (491)
T ss_pred HHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEE
Confidence 889999885 334443 34799999999999999999999999999999999999999999999998889999999
Q ss_pred ecCCcHHHHHhhccEeEEecCcEEEEEcCCC
Q 000576 1023 IHQPSIDIFEAFDELFLLKRGGQEIYVGPLG 1053 (1412)
Q Consensus 1023 ~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~~ 1053 (1412)
||+++ ++.++||++++|++ |+++..++..
T Consensus 448 sHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 448 SSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred CCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 99987 57789999999985 8999877664
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=4.3e-61 Score=598.07 Aligned_cols=451 Identities=19% Similarity=0.258 Sum_probs=332.0
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCc-
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVH- 238 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~- 238 (1412)
++++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++..
T Consensus 13 ~~~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 89 (490)
T PRK10938 13 LSDTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTD 89 (490)
T ss_pred cCCeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchh
Confidence 33456999999999999999999999999999999999999887 7999999976643221 2458999997532
Q ss_pred -C------CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCc
Q 000576 239 -I------GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDV 311 (1412)
Q Consensus 239 -~------~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~ 311 (1412)
+ ..+||+|++.++. +....++.+++.+||++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~ 127 (490)
T PRK10938 90 MLSPGEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITA 127 (490)
T ss_pred hcccchhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHh
Confidence 1 1457777664310 01123456789999987
Q ss_pred cccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 000576 312 CADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYD 391 (1412)
Q Consensus 312 ~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~ 391 (1412)
..|..++ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+++|+.++|+..++.+
T Consensus 128 ~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~g~tvii~tH~~~~~~~ 200 (490)
T PRK10938 128 LLDRRFK-----YLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQ--SGITLVLVLNRFDEIPD 200 (490)
T ss_pred hhhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--cCCeEEEEeCCHHHHHh
Confidence 7766554 6999999999999999999999999999999999999999999999865 35677778999999999
Q ss_pred hcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcch
Q 000576 392 LFDDIILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSV 471 (1412)
Q Consensus 392 ~~D~vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (1412)
+||+|++|++|+++.+|+++++.+. +.+.... .
T Consensus 201 ~~d~v~~l~~G~i~~~~~~~~~~~~---------------~~~~~~~----------------------------~---- 233 (490)
T PRK10938 201 FVQFAGVLADCTLAETGEREEILQQ---------------ALVAQLA----------------------------H---- 233 (490)
T ss_pred hCCEEEEEECCEEEEeCCHHHHhcc---------------hhhhhhh----------------------------h----
Confidence 9999999999999999887654210 0000000 0
Q ss_pred hhhhhhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCc
Q 000576 472 GQILGDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDS 551 (1412)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~ 551 (1412)
+ ..
T Consensus 234 ----------------------------------------~-------------------------------------~~ 236 (490)
T PRK10938 234 ----------------------------------------S-------------------------------------EQ 236 (490)
T ss_pred ----------------------------------------h-------------------------------------hc
Confidence 0 00
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccC
Q 000576 552 VTDGVIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFD 631 (1412)
Q Consensus 552 ~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~ 631 (1412)
... .
T Consensus 237 ~~~---------------------------------------------------------------------------~- 240 (490)
T PRK10938 237 LEG---------------------------------------------------------------------------V- 240 (490)
T ss_pred cCc---------------------------------------------------------------------------c-
Confidence 000 0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHH
Q 000576 632 PNAGRFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNA 711 (1412)
Q Consensus 632 ~~~~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~a 711 (1412)
..|.
T Consensus 241 -----------------------------------------------------------~~~~----------------- 244 (490)
T PRK10938 241 -----------------------------------------------------------QLPE----------------- 244 (490)
T ss_pred -----------------------------------------------------------ccCc-----------------
Confidence 0000
Q ss_pred HHHHHhcCCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhccccccccccccccccc
Q 000576 712 IMVNEFLGHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQS 791 (1412)
Q Consensus 712 l~~nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~ 791 (1412)
.. . +
T Consensus 245 ------------~~----~------------------------------------------------------------~ 248 (490)
T PRK10938 245 ------------PD----E------------------------------------------------------------P 248 (490)
T ss_pred ------------cc----c------------------------------------------------------------c
Confidence 00 0 0
Q ss_pred cccccccCCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHh
Q 000576 792 LETITEANQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMD 871 (1412)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~ 871 (1412)
.. .... +.....++++|+++.|+ ++.+|+|+|+.+++||+++|+||||||||||++
T Consensus 249 ---~~--~~~~------~~~~~~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~ 304 (490)
T PRK10938 249 ---SA--RHAL------PANEPRIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLS 304 (490)
T ss_pred ---cc--cccc------CCCCceEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHH
Confidence 00 0000 00112489999998874 235999999999999999999999999999999
Q ss_pred hhcCCCCCCeEEEEEEEcCccCCc----ccccceEEEeccCCCCCC--CCCHHHHHHHHHHh--cCCCCCCHHHHHHHHH
Q 000576 872 VLAGRKTTGYVTGNITISGYPKKQ----ETFARISGYCEQNDIHSP--QVTVYESLLYSAWL--RLSPEVDSKTRKMFIE 943 (1412)
Q Consensus 872 ~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~yv~Q~~~~~~--~lTv~E~l~f~a~l--r~~~~~~~~~~~~~v~ 943 (1412)
+|+|...+ ..+|+|.++|.+... ...++.++|++|++.+.+ ..|+++++.+.... ....... .+.++.++
T Consensus 305 ~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 382 (490)
T PRK10938 305 LITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVS-DRQQKLAQ 382 (490)
T ss_pred HHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCC-HHHHHHHH
Confidence 99996432 137999999976421 123456899999875543 35777666443211 1111111 22345688
Q ss_pred HHHHHcCCch-hhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEE
Q 000576 944 EVMELVELNL-LRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVC 1021 (1412)
Q Consensus 944 ~~l~~l~l~~-~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g-~tvi~ 1021 (1412)
++++.+++.+ ..+..+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++| .|||+
T Consensus 383 ~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tvii 457 (490)
T PRK10938 383 QWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLF 457 (490)
T ss_pred HHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9999999986 555543 4799999999999999999999999999999999999999999999998765 47999
Q ss_pred EecCCcHHHHH-hhccEeEEecCcEEEEEc
Q 000576 1022 TIHQPSIDIFE-AFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 1022 ~~Hqp~~~i~~-~fD~v~ll~~gG~~~y~G 1050 (1412)
++|+++ ++.+ .+|++++|++ |++++.-
T Consensus 458 vsHd~~-~~~~~~~d~v~~l~~-G~i~~~~ 485 (490)
T PRK10938 458 VSHHAE-DAPACITHRLEFVPD-GDIYRYV 485 (490)
T ss_pred Eecchh-hhhhhhheeEEEecC-CceEEee
Confidence 999986 4655 5899999986 6776643
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.2e-59 Score=521.87 Aligned_cols=471 Identities=24% Similarity=0.326 Sum_probs=370.1
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCC--CCCceeEEEECCccCCCcCcc-------ceEEEEcC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDS--SLRLYGRVTYNGHNMDEFVPQ-------RTAAYISQ 234 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~~-------~~~~yv~Q 234 (1412)
+...++++|||.|++||.+||+|.||||||-..+.+.|+++. ....+|+|.|+|+++-....+ ..|++++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 456799999999999999999999999999999999999975 234579999999987544332 47999999
Q ss_pred CC--CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcc
Q 000576 235 HD--VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVC 312 (1412)
Q Consensus 235 ~d--~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~ 312 (1412)
++ .+-|-.|+..-+.-..++... ..+..++.++-++|+..|+++.
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------------------------------~~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------------------------------LSRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------------------------------ccHHHHHHHHHHHHHHcCCCch
Confidence 96 556666777777655444311 0112234456678999999986
Q ss_pred ccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000576 313 ADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDL 392 (1412)
Q Consensus 313 ~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~ 392 (1412)
.... +.++..|||||||||.||.||+.+|++|+-||||++||...+.+|.+.|+++-+. -+..++.|+|+..-+-++
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~-~gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAE-LGMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHH-hCcEEEEEeccHHHHHHh
Confidence 5443 5778899999999999999999999999999999999999999999999999765 477888899999999999
Q ss_pred cCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchh
Q 000576 393 FDDIILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVG 472 (1412)
Q Consensus 393 ~D~vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (1412)
+|+|+||.+|+++++|+.+++.. .|. .||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~Pq-------------------------HpYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQ-------------------------HPYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCC-------------------------ChHH-----------------
Confidence 99999999999999998777632 111 0000
Q ss_pred hhhhhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCcc
Q 000576 473 QILGDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSV 552 (1412)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~ 552 (1412)
|.+
T Consensus 255 ---------------------------------------r~L-------------------------------------- 257 (534)
T COG4172 255 ---------------------------------------RKL-------------------------------------- 257 (534)
T ss_pred ---------------------------------------HHH--------------------------------------
Confidence 000
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCC
Q 000576 553 TDGVIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDP 632 (1412)
Q Consensus 553 ~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~ 632 (1412)
T Consensus 258 -------------------------------------------------------------------------------- 257 (534)
T COG4172 258 -------------------------------------------------------------------------------- 257 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHH
Q 000576 633 NAGRFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAI 712 (1412)
Q Consensus 633 ~~~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al 712 (1412)
+.+
T Consensus 258 -------------------------l~a---------------------------------------------------- 260 (534)
T COG4172 258 -------------------------LAA---------------------------------------------------- 260 (534)
T ss_pred -------------------------Hhc----------------------------------------------------
Confidence 000
Q ss_pred HHHHhcCCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccc
Q 000576 713 MVNEFLGHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSL 792 (1412)
Q Consensus 713 ~~nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~ 792 (1412)
++.|
T Consensus 261 ------------------eP~g---------------------------------------------------------- 264 (534)
T COG4172 261 ------------------EPSG---------------------------------------------------------- 264 (534)
T ss_pred ------------------CCCC----------------------------------------------------------
Confidence 0000
Q ss_pred ccccccCCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhh
Q 000576 793 ETITEANQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDV 872 (1412)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~ 872 (1412)
......+..|..++.+|+...++.++.+-.+ ..+...++++||++.++||.+||+|.||||||||-.+
T Consensus 265 ----------~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r--~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~a 332 (534)
T COG4172 265 ----------DPPPLPEDAPVLLEVEDLRVWFPIKGGFLRR--TVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLA 332 (534)
T ss_pred ----------CCCCCCCCCCceEEecceEEEEecCCccccc--cchheEEeccceeEecCCCeEEEEecCCCCcchHHHH
Confidence 0000001124467888888777765432211 1244679999999999999999999999999999999
Q ss_pred hcCCCCCCeEEEEEEEcCccCCc------ccccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHH
Q 000576 873 LAGRKTTGYVTGNITISGYPKKQ------ETFARISGYCEQNDI--HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEE 944 (1412)
Q Consensus 873 L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~~yv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~ 944 (1412)
|.+...+ +|+|.++|.++.. ...++.+-.|+||+. +.|.+||.+-+.-+.....+ ..+..++++++.+
T Consensus 333 llrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~-~ls~~eR~~rv~~ 408 (534)
T COG4172 333 LLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEP-KLSAAERDQRVIE 408 (534)
T ss_pred HHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCC-CCCHHHHHHHHHH
Confidence 9986653 5999999998753 235677889999985 78999999988766554433 5678899999999
Q ss_pred HHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEe
Q 000576 945 VMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTI 1023 (1412)
Q Consensus 945 ~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~ 1023 (1412)
+++.+||+... .... ...+|||||||++|||||+.+|++++||||||.||-.-+..|.++||++.+ .|.+-++++
T Consensus 409 aL~EVGLDp~~--r~RY--PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFIS 484 (534)
T COG4172 409 ALEEVGLDPAT--RNRY--PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFIS 484 (534)
T ss_pred HHHHcCCChhH--hhcC--CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 99999998632 2222 357999999999999999999999999999999999999999999999975 499999999
Q ss_pred cCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 1024 HQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1024 Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
||.. -+-.+||++++|++ |++|..||.
T Consensus 485 HDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 485 HDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred ccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 9986 47778999999985 899999996
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.4e-59 Score=585.50 Aligned_cols=497 Identities=21% Similarity=0.266 Sum_probs=334.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCCCH
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTV 244 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 244 (1412)
++++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.+++. ..++||+|++.+++.+||
T Consensus 19 ~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~---~G~i~~~~~--------~~i~~v~Q~~~~~~~~tv 87 (556)
T PRK11819 19 KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEF---EGEARPAPG--------IKVGYLPQEPQLDPEKTV 87 (556)
T ss_pred CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEecCC--------CEEEEEecCCCCCCCCcH
Confidence 456999999999999999999999999999999999999887 799999752 469999999888889999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHH-------HHHH-HHhhhhhhhHHHHHHHHHhCCCcccccc
Q 000576 245 RETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDV-------FMKA-AATEGQEASVVTDYILKILGLDVCADTM 316 (1412)
Q Consensus 245 ~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~il~~lgL~~~~dt~ 316 (1412)
+||+.++.... +.............. .++.+.+. ..+. ......+....++.+++.+||+. .+..
T Consensus 88 ~e~l~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~ 160 (556)
T PRK11819 88 RENVEEGVAEV-----KAALDRFNEIYAAYA-EPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCPP-WDAK 160 (556)
T ss_pred HHHHHHhhHHH-----HHHHHHHHHHHHHhc-cCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCCc-ccCc
Confidence 99999863210 000000000000000 00001000 0000 01111223455778999999963 5554
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
+ ..|||||||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ ++ +|+.++|+..++.+++|+|
T Consensus 161 ~-----~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~----~~-tviiisHd~~~~~~~~d~i 230 (556)
T PRK11819 161 V-----TKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDY----PG-TVVAVTHDRYFLDNVAGWI 230 (556)
T ss_pred h-----hhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhC----CC-eEEEEeCCHHHHHhhcCeE
Confidence 4 469999999999999999999999999999999999999999999875 24 6667899999999999999
Q ss_pred EEEeCCeEE-EecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhh
Q 000576 397 ILISDGQIV-YQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQIL 475 (1412)
Q Consensus 397 ivL~~G~iv-~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (1412)
++|++|+++ +.|+++++.+.-+ .+... ..+ + .+..+. ++
T Consensus 231 ~~l~~g~i~~~~g~~~~~~~~~~------------~~~~~-------~~~---------------~-~~~~~~-----~~ 270 (556)
T PRK11819 231 LELDRGRGIPWEGNYSSWLEQKA------------KRLAQ-------EEK---------------Q-EAARQK-----AL 270 (556)
T ss_pred EEEeCCEEEEecCCHHHHHHHHH------------HHHHH-------HHH---------------H-HHHHHH-----HH
Confidence 999999986 8898887643100 00000 000 0 000000 00
Q ss_pred hhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccc
Q 000576 476 GDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDG 555 (1412)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~ 555 (1412)
. +......+ .... +
T Consensus 271 ~----------------------------~~~~~~~~-------~~~~---~---------------------------- 284 (556)
T PRK11819 271 K----------------------------RELEWVRQ-------SPKA---R---------------------------- 284 (556)
T ss_pred H----------------------------HHHHHHHH-------hhhh---h----------------------------
Confidence 0 00000000 0000 0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHH
Q 000576 556 VIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAG 635 (1412)
Q Consensus 556 ~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~ 635 (1412)
.... ++.
T Consensus 285 ----------------~~~~--------------~~~------------------------------------------- 291 (556)
T PRK11819 285 ----------------QAKS--------------KAR------------------------------------------- 291 (556)
T ss_pred ----------------HHHH--------------HHH-------------------------------------------
Confidence 0000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHH
Q 000576 636 RFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVN 715 (1412)
Q Consensus 636 ~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~n 715 (1412)
..+ ++.. .
T Consensus 292 ------------------~~~----------------------------------------------------~~~~-~- 299 (556)
T PRK11819 292 ------------------LAR----------------------------------------------------YEEL-L- 299 (556)
T ss_pred ------------------HHH----------------------------------------------------HHHh-h-
Confidence 000 0000 0
Q ss_pred HhcCCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccc
Q 000576 716 EFLGHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSLETI 795 (1412)
Q Consensus 716 ef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~ 795 (1412)
... .... . .....
T Consensus 300 ---~~~----~~~~------------------------------------------------------~------~~~~~ 312 (556)
T PRK11819 300 ---SEE----YQKR------------------------------------------------------N------ETNEI 312 (556)
T ss_pred ---ccc----cccc------------------------------------------------------C------CCcee
Confidence 000 0000 0 00000
Q ss_pred cccCCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcC
Q 000576 796 TEANQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAG 875 (1412)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g 875 (1412)
. .. ... +.....++++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|
T Consensus 313 ~-~~-~~~-----~~~~~~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G 372 (556)
T PRK11819 313 F-IP-PGP-----RLGDKVIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITG 372 (556)
T ss_pred e-cC-CCC-----CCCCeEEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 0 00 000 00122589999998874 2469999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEcCccCCcccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch-
Q 000576 876 RKTTGYVTGNITISGYPKKQETFARISGYCEQND-IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL- 953 (1412)
Q Consensus 876 ~~~~~~~~G~i~i~g~~~~~~~~~~~~~yv~Q~~-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~- 953 (1412)
...+ .+|+|.+++. ..+||++|+. .+++.+||+|++.+....... ... ....+++++.+++.+
T Consensus 373 ~~~p--~~G~i~~~~~--------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~---~~~--~~~~~~~l~~~~l~~~ 437 (556)
T PRK11819 373 QEQP--DSGTIKIGET--------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKV---GNR--EIPSRAYVGRFNFKGG 437 (556)
T ss_pred CCCC--CCeEEEECCc--------eEEEEEeCchhhcCCCCCHHHHHHhhcccccc---ccc--HHHHHHHHHhCCCChh
Confidence 7654 4799998541 1489999986 678899999999876432211 111 122456889999863
Q ss_pred hhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh
Q 000576 954 LRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA 1033 (1412)
Q Consensus 954 ~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~ 1033 (1412)
..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.+...+++.|+++. | |||++||++. .+.+.
T Consensus 438 ~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~ 508 (556)
T PRK11819 438 DQQKKV-----GVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRI 508 (556)
T ss_pred HhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHh
Confidence 344443 4799999999999999999999999999999999999999999999872 4 8999999986 57788
Q ss_pred hccEeEEecCcEEE-EEcC
Q 000576 1034 FDELFLLKRGGQEI-YVGP 1051 (1412)
Q Consensus 1034 fD~v~ll~~gG~~~-y~G~ 1051 (1412)
||++++|++||++. +.|+
T Consensus 509 ~d~i~~l~~~g~~~~~~g~ 527 (556)
T PRK11819 509 ATHILAFEGDSQVEWFEGN 527 (556)
T ss_pred CCEEEEEECCCeEEEecCC
Confidence 99999998767776 4454
No 36
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=2.4e-58 Score=579.72 Aligned_cols=497 Identities=20% Similarity=0.253 Sum_probs=332.6
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCCCH
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTV 244 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 244 (1412)
++++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.+++. ..++||+|++.+++++||
T Consensus 17 ~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~---~G~i~~~~~--------~~i~~v~Q~~~~~~~~tv 85 (552)
T TIGR03719 17 KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEF---NGEARPAPG--------IKVGYLPQEPQLDPTKTV 85 (552)
T ss_pred CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEecCC--------CEEEEEeccCCCCCCCcH
Confidence 456999999999999999999999999999999999999887 799999862 469999999888889999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCCh-------HHHHHH-HHhhhhhhhHHHHHHHHHhCCCcccccc
Q 000576 245 RETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDL-------DVFMKA-AATEGQEASVVTDYILKILGLDVCADTM 316 (1412)
Q Consensus 245 ~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~il~~lgL~~~~dt~ 316 (1412)
+||+.++.... .....+......... .++.+. ....+. .....++....++.+++.+|++. .|+.
T Consensus 86 ~e~i~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~ 158 (552)
T TIGR03719 86 RENVEEGVAEI-----KDALDRFNEISAKFA-EPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCPP-WDAD 158 (552)
T ss_pred HHHHHHhhHHH-----HHHHHHHHHHHHHhc-cCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCCc-ccCc
Confidence 99999864210 000000000000000 000000 001111 11112223345677899999964 4544
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
+ ..|||||||||+||++|+.+|++|+|||||++||+.++..+.+.|+++ ++ +||.++|+...+..++|++
T Consensus 159 ~-----~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~----~~-tvIiisHd~~~~~~~~d~v 228 (552)
T TIGR03719 159 V-----TKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY----PG-TVVAVTHDRYFLDNVAGWI 228 (552)
T ss_pred h-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC----CC-eEEEEeCCHHHHHhhcCeE
Confidence 4 479999999999999999999999999999999999999999998864 24 5666899999999999999
Q ss_pred EEEeCCeEE-EecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhh
Q 000576 397 ILISDGQIV-YQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQIL 475 (1412)
Q Consensus 397 ivL~~G~iv-~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (1412)
++|++|+++ +.|+++++.+.-+ .+ .+ .+ ...++ +.
T Consensus 229 ~~l~~g~i~~~~g~~~~~~~~~~------------~~----------~~-~~---------------~~~~~------~~ 264 (552)
T TIGR03719 229 LELDRGRGIPWEGNYSSWLEQKE------------KR----------LE-QE---------------EKEES------AR 264 (552)
T ss_pred EEEECCEEEEecCCHHHHHHHHH------------HH----------HH-HH---------------HHHHH------HH
Confidence 999999975 8898887654110 00 00 00 00000 00
Q ss_pred hhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccc
Q 000576 476 GDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDG 555 (1412)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~ 555 (1412)
.. +. .|......+... .
T Consensus 265 ~~---------------------------~~----~~~~~~~~~~~~--------------------------------~ 281 (552)
T TIGR03719 265 QK---------------------------AL----KRELEWVRSSPK--------------------------------A 281 (552)
T ss_pred HH---------------------------HH----HHHHHHHHhhhh--------------------------------h
Confidence 00 00 000000000000 0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHH
Q 000576 556 VIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAG 635 (1412)
Q Consensus 556 ~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~ 635 (1412)
. . .+.+
T Consensus 282 ----------------~---~-----------~~~~-------------------------------------------- 287 (552)
T TIGR03719 282 ----------------R---Q-----------AKSK-------------------------------------------- 287 (552)
T ss_pred ----------------H---H-----------HHHH--------------------------------------------
Confidence 0 0 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHH
Q 000576 636 RFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVN 715 (1412)
Q Consensus 636 ~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~n 715 (1412)
. +. . .++.. .
T Consensus 288 ----------------~---~~-~------------------------------------------------~~~~~--~ 297 (552)
T TIGR03719 288 ----------------A---RL-A------------------------------------------------RYEEL--L 297 (552)
T ss_pred ----------------H---HH-H------------------------------------------------HHHhh--h
Confidence 0 00 0 00000 0
Q ss_pred HhcCCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccc
Q 000576 716 EFLGHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSLETI 795 (1412)
Q Consensus 716 ef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~ 795 (1412)
+ . .... . .. ... .
T Consensus 298 ~-----~--~~~~---------------------------------------------------~---~~---~~~---~ 310 (552)
T TIGR03719 298 S-----Q--EFQK---------------------------------------------------R---NE---TAE---I 310 (552)
T ss_pred h-----h--cccc---------------------------------------------------c---CC---Cce---e
Confidence 0 0 0000 0 00 000 0
Q ss_pred cccCCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcC
Q 000576 796 TEANQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAG 875 (1412)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g 875 (1412)
...... +.....++++|+++.++ ++.+|+|+|+.|++||+++|+||||||||||+++|+|
T Consensus 311 -~~~~~~------~~~~~~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G 370 (552)
T TIGR03719 311 -YIPPGP------RLGDKVIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITG 370 (552)
T ss_pred -ecCCCC------CCCCeEEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcC
Confidence 000000 00112589999998873 2469999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEcCccCCcccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch-
Q 000576 876 RKTTGYVTGNITISGYPKKQETFARISGYCEQND-IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL- 953 (1412)
Q Consensus 876 ~~~~~~~~G~i~i~g~~~~~~~~~~~~~yv~Q~~-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~- 953 (1412)
...+ .+|+|.+++. ..+||++|+. .+++.+||.|++.+...... .... +..++++++.+++.+
T Consensus 371 ~~~p--~~G~i~~~~~--------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~ 435 (552)
T TIGR03719 371 QEQP--DSGTIKIGET--------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGS 435 (552)
T ss_pred CCCC--CCeEEEECCc--------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChh
Confidence 7554 4799998541 1489999986 47788999999987642211 1111 123457889999864
Q ss_pred hhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh
Q 000576 954 LRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA 1033 (1412)
Q Consensus 954 ~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~ 1033 (1412)
..+..+ ..|||||||||+||++|+.+|++|+|||||+|||+.+...+++.|+++. .|||++||++. .+...
T Consensus 436 ~~~~~~-----~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~ 506 (552)
T TIGR03719 436 DQQKKV-----GQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRI 506 (552)
T ss_pred HhcCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHh
Confidence 344443 4799999999999999999999999999999999999999999999872 48999999986 57778
Q ss_pred hccEeEEecCcEEE-EEcC
Q 000576 1034 FDELFLLKRGGQEI-YVGP 1051 (1412)
Q Consensus 1034 fD~v~ll~~gG~~~-y~G~ 1051 (1412)
+|++++|++||+++ +.|+
T Consensus 507 ~d~i~~l~~~~~~~~~~g~ 525 (552)
T TIGR03719 507 ATHILAFEGDSHVEWFEGN 525 (552)
T ss_pred CCEEEEEECCCeEEEeCCC
Confidence 99999998767876 4444
No 37
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-58 Score=577.78 Aligned_cols=499 Identities=17% Similarity=0.242 Sum_probs=335.1
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 242 (1412)
++++++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|. +.++|++|++..++++
T Consensus 11 ~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~~~--------~~i~~~~q~~~~~~~~ 79 (530)
T PRK15064 11 FGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPS---AGNVSLDPN--------ERLGKLRQDQFAFEEF 79 (530)
T ss_pred eCCcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEecCC--------CEEEEEeccCCcCCCC
Confidence 34457999999999999999999999999999999999999887 799999973 3689999998888999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCC--CCCChHHH----HHHHHhhhhhhhHHHHHHHHHhCCCcccccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIK--PDPDLDVF----MKAAATEGQEASVVTDYILKILGLDVCADTM 316 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 316 (1412)
||+|++.++..- .+..... .+...... ...+.... .......+.+.+..++.+++.+||++..+
T Consensus 80 tv~e~l~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-- 149 (530)
T PRK15064 80 TVLDTVIMGHTE-----LWEVKQE---RDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQH-- 149 (530)
T ss_pred cHHHHHHHhhHH-----HHHHHHH---HHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHh--
Confidence 999999876310 0000000 00000000 00000000 00111112223345778999999975332
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
++.+..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++ .+.+||+++|+...+.++||+|
T Consensus 150 --~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~-----~~~tiiivsHd~~~~~~~~d~i 222 (530)
T PRK15064 150 --YGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE-----RNSTMIIISHDRHFLNSVCTHM 222 (530)
T ss_pred --cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh-----CCCeEEEEeCCHHHHHhhcceE
Confidence 123347999999999999999999999999999999999999999998864 2566777999999999999999
Q ss_pred EEEeCCeE-EEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhhhh
Q 000576 397 ILISDGQI-VYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQIL 475 (1412)
Q Consensus 397 ivL~~G~i-v~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (1412)
++|++|++ ++.|+++++.+.-+. . ..... +.... .
T Consensus 223 ~~l~~g~i~~~~g~~~~~~~~~~~------------~-------~~~~~-------------------~~~~~------~ 258 (530)
T PRK15064 223 ADLDYGELRVYPGNYDEYMTAATQ------------A-------RERLL-------------------ADNAK------K 258 (530)
T ss_pred EEEeCCEEEEecCCHHHHHHHHHH------------H-------HHHHH-------------------HHHHH------H
Confidence 99999999 589998876541100 0 00000 00000 0
Q ss_pred hhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccccc
Q 000576 476 GDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVTDG 555 (1412)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~~~ 555 (1412)
..+ .+.. . ++. .+ .. ... ...
T Consensus 259 ~~~---------------------------~~~~-~-~~~--~~-------------------------~~--~~~-~~~ 279 (530)
T PRK15064 259 KAQ---------------------------IAEL-Q-SFV--SR-------------------------FS--ANA-SKA 279 (530)
T ss_pred HHH---------------------------HHHH-H-HHH--HH-------------------------hh--ccc-hhh
Confidence 000 0000 0 000 00 00 000 000
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCCHH
Q 000576 556 VIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPNAG 635 (1412)
Q Consensus 556 ~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~~~ 635 (1412)
+
T Consensus 280 -----------------------------------~-------------------------------------------- 280 (530)
T PRK15064 280 -----------------------------------K-------------------------------------------- 280 (530)
T ss_pred -----------------------------------H--------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHHHH
Q 000576 636 RFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIMVN 715 (1412)
Q Consensus 636 ~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~~n 715 (1412)
. +....+ ...
T Consensus 281 -------------~-~~~~~~--------------------------------------------------------~~~ 290 (530)
T PRK15064 281 -------------Q-ATSRAK--------------------------------------------------------QID 290 (530)
T ss_pred -------------H-HHHHHH--------------------------------------------------------HHh
Confidence 0 000000 000
Q ss_pred HhcCCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccc
Q 000576 716 EFLGHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSLETI 795 (1412)
Q Consensus 716 ef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~~~ 795 (1412)
+...... .. . ......
T Consensus 291 ~~~~~~~--~~-----------------------------------------------------------~---~~~~~~ 306 (530)
T PRK15064 291 KIKLEEV--KP-----------------------------------------------------------S---SRQNPF 306 (530)
T ss_pred hcccccc--CC-----------------------------------------------------------c---cccCce
Confidence 0000000 00 0 000000
Q ss_pred cccCCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcC
Q 000576 796 TEANQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAG 875 (1412)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g 875 (1412)
...... . +.....++++|++++|+ ++.+|+|+|++|++||+++|+||||||||||+++|+|
T Consensus 307 ~~~~~~--~----~~~~~~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G 367 (530)
T PRK15064 307 IRFEQD--K----KLHRNALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVG 367 (530)
T ss_pred eeCCCC--C----CCCCceEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhC
Confidence 000000 0 00112589999999874 2358999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEcCccCCcccccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-
Q 000576 876 RKTTGYVTGNITISGYPKKQETFARISGYCEQNDI--HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN- 952 (1412)
Q Consensus 876 ~~~~~~~~G~i~i~g~~~~~~~~~~~~~yv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~- 952 (1412)
...+ .+|+|.++|. +.+||++|+.. +.+.+||+|++.+.. .. . ..++.++++++.+++.
T Consensus 368 ~~~p--~~G~i~~~~~--------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~ 429 (530)
T PRK15064 368 ELEP--DSGTVKWSEN--------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQ 429 (530)
T ss_pred CCCC--CCeEEEECCc--------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCCh
Confidence 7654 4799999873 45899999864 556799999986421 11 1 1134578899999984
Q ss_pred hhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHH
Q 000576 953 LLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE 1032 (1412)
Q Consensus 953 ~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~ 1032 (1412)
+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.+...+++.|+++ +.|||++||++. .+.+
T Consensus 430 ~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~ 500 (530)
T PRK15064 430 DDIKKSV-----KVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSS 500 (530)
T ss_pred hHhcCcc-----cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHH
Confidence 4555443 479999999999999999999999999999999999999999999886 459999999986 5778
Q ss_pred hhccEeEEecCcEEE-EEcCC
Q 000576 1033 AFDELFLLKRGGQEI-YVGPL 1052 (1412)
Q Consensus 1033 ~fD~v~ll~~gG~~~-y~G~~ 1052 (1412)
.+|++++|++ |+++ +.|+.
T Consensus 501 ~~d~i~~l~~-g~i~~~~g~~ 520 (530)
T PRK15064 501 LATRIIEITP-DGVVDFSGTY 520 (530)
T ss_pred hCCEEEEEEC-CeEEEcCCCH
Confidence 8999999986 6776 77764
No 38
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-56 Score=564.59 Aligned_cols=197 Identities=23% Similarity=0.367 Sum_probs=160.7
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.|+ ++.+|+|+|+.|++|+++||+|||||||||||++|+|...+ .+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAP--VSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCC--
Confidence 589999998874 24699999999999999999999999999999999997654 4799998641
Q ss_pred CcccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch-hhhcccCCCCCCCCCHH
Q 000576 894 KQETFARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL-LRQALVGLPGVNGLSTE 970 (1412)
Q Consensus 894 ~~~~~~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~~~lSgG 970 (1412)
..+||++|+. .+.+..|+.+++.- . .. ......+.++++.+++.. ..+..+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34566677776531 1 11 112345788999999853 445443 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEE-EE
Q 000576 971 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI-YV 1049 (1412)
Q Consensus 971 qrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~-y~ 1049 (1412)
|||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++ . .|||+++||+. .+...||++++|.+ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 3 49999999986 57788999999985 7876 77
Q ss_pred cCC
Q 000576 1050 GPL 1052 (1412)
Q Consensus 1050 G~~ 1052 (1412)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 39
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.9e-56 Score=521.68 Aligned_cols=459 Identities=22% Similarity=0.370 Sum_probs=359.8
Q ss_pred hhhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCcc----ceEEE
Q 000576 156 LNILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQ----RTAAY 231 (1412)
Q Consensus 156 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~y 231 (1412)
+++++++++..++|+||||++++||+++|+|.||||||||+|+|+|.++|+ +|+|.++|++..-..++ .-|+.
T Consensus 11 ~~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~ 87 (500)
T COG1129 11 LRGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIAT 87 (500)
T ss_pred eecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEE
Confidence 456778889999999999999999999999999999999999999999998 89999999988655553 46899
Q ss_pred EcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCc
Q 000576 232 ISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDV 311 (1412)
Q Consensus 232 v~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~ 311 (1412)
|.|+..++|++||.|||.++...... ... -|. .+.......+|+.+|++.
T Consensus 88 V~QEl~L~p~LsVaeNifLgre~~~~---~g~----------------id~-----------~~m~~~A~~~l~~lg~~~ 137 (500)
T COG1129 88 VHQELSLVPNLSVAENIFLGREPTRR---FGL----------------IDR-----------KAMRRRARELLARLGLDI 137 (500)
T ss_pred EeechhccCCccHHHHhhcccccccC---CCc----------------cCH-----------HHHHHHHHHHHHHcCCCC
Confidence 99999999999999999887543210 000 010 112234567899999976
Q ss_pred cccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 000576 312 CADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYD 391 (1412)
Q Consensus 312 ~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~ 391 (1412)
..++.|+ .||+||||.|.|||||..++++++||||||+|+...+.++++.++++.. +|..||.++|..+|+++
T Consensus 138 ~~~~~v~-----~LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~Ei~~ 210 (500)
T COG1129 138 DPDTLVG-----DLSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDEVFE 210 (500)
T ss_pred Chhhhhh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHHHHH
Confidence 6888887 4999999999999999999999999999999999999999999999864 68899999999999999
Q ss_pred hcCeEEEEeCCeEEEecCh-hhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcc
Q 000576 392 LFDDIILISDGQIVYQGPR-EHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFS 470 (1412)
Q Consensus 392 ~~D~vivL~~G~iv~~G~~-~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (1412)
+||+|.||.||+.+..++. .+.- .++..+
T Consensus 211 i~DritVlRDG~~v~~~~~~~~~~--------------------------------------------~~~lv~------ 240 (500)
T COG1129 211 IADRITVLRDGRVVGTRPTAAETS--------------------------------------------EDELVR------ 240 (500)
T ss_pred hcCEEEEEeCCEEeeecccccCCC--------------------------------------------HHHHHH------
Confidence 9999999999999876542 2210 000000
Q ss_pred hhhhhhhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCC
Q 000576 471 VGQILGDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRD 550 (1412)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~ 550 (1412)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhcccc
Q 000576 551 SVTDGVIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGF 630 (1412)
Q Consensus 551 ~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~ 630 (1412)
.|+|
T Consensus 241 ---------------------------------------------------------------------------~MvG- 244 (500)
T COG1129 241 ---------------------------------------------------------------------------LMVG- 244 (500)
T ss_pred ---------------------------------------------------------------------------HhhC-
Confidence 0000
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHH
Q 000576 631 DPNAGRFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQN 710 (1412)
Q Consensus 631 ~~~~~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~ 710 (1412)
+..
T Consensus 245 --------------------------------r~~--------------------------------------------- 247 (500)
T COG1129 245 --------------------------------REL--------------------------------------------- 247 (500)
T ss_pred --------------------------------cch---------------------------------------------
Confidence 000
Q ss_pred HHHHHHhcCCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcccccccccccccccc
Q 000576 711 AIMVNEFLGHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQ 790 (1412)
Q Consensus 711 al~~nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~ 790 (1412)
.+ .|
T Consensus 248 ---~~-----~~-------------------------------------------------------------------- 251 (500)
T COG1129 248 ---ED-----LF-------------------------------------------------------------------- 251 (500)
T ss_pred ---hh-----hc--------------------------------------------------------------------
Confidence 00 00
Q ss_pred ccccccccCCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHH
Q 000576 791 SLETITEANQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLM 870 (1412)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl 870 (1412)
. . . ... ...+..++++|++.. ..++||||++++||++||.|-=|||+|-|+
T Consensus 252 -----~--~-~-~~~---~~~~~~l~v~~l~~~-----------------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~ 302 (500)
T COG1129 252 -----P--E-P-PEE---GIGEPVLEVRNLSGG-----------------GKVRDVSFTVRAGEILGIAGLVGAGRTELA 302 (500)
T ss_pred -----c--c-c-ccc---CCCCcEEEEecCCCC-----------------CceeCceeEEeCCcEEEEeccccCCHHHHH
Confidence 0 0 0 000 111235677877632 147899999999999999999999999999
Q ss_pred hhhcCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccC---CCCCCCCCHHHHHHHHHHhcCCC--CCCHHHHHHH
Q 000576 871 DVLAGRKTTGYVTGNITISGYPKKQE----TFARISGYCEQN---DIHSPQVTVYESLLYSAWLRLSP--EVDSKTRKMF 941 (1412)
Q Consensus 871 ~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~~yv~Q~---~~~~~~lTv~E~l~f~a~lr~~~--~~~~~~~~~~ 941 (1412)
++|.|.... .+|+|.+||.+.... ..+.-++||+.| +-+++.++|+||+.++...+... -.+....++.
T Consensus 303 ~~lfG~~~~--~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~ 380 (500)
T COG1129 303 RALFGARPA--SSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERAL 380 (500)
T ss_pred HHHhCCCcC--CCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHH
Confidence 999995432 479999999986532 344568999987 44788999999998873323221 2445555667
Q ss_pred HHHHHHHcCCchhh-hcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEE
Q 000576 942 IEEVMELVELNLLR-QALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 1020 (1412)
Q Consensus 942 v~~~l~~l~l~~~~-~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi 1020 (1412)
+++..+.|++.... +.. +..||||++|||.|||.|..+|+||+|||||.|+|.-+...|.++|++++++|++||
T Consensus 381 ~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail 455 (500)
T COG1129 381 AERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAIL 455 (500)
T ss_pred HHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEE
Confidence 88899999886432 222 457999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcHHHHHhhccEeEEecCcEEEEEcC
Q 000576 1021 CTIHQPSIDIFEAFDELFLLKRGGQEIYVGP 1051 (1412)
Q Consensus 1021 ~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~ 1051 (1412)
+++-+.. |+..+||||++|.+ |+++-.=+
T Consensus 456 ~iSSElp-Ell~~~DRIlVm~~-Gri~~e~~ 484 (500)
T COG1129 456 MISSELP-ELLGLSDRILVMRE-GRIVGELD 484 (500)
T ss_pred EEeCChH-HHHhhCCEEEEEEC-CEEEEEec
Confidence 9999875 89999999999995 78876433
No 40
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=5.2e-56 Score=555.38 Aligned_cols=211 Identities=21% Similarity=0.258 Sum_probs=172.8
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++ + ..|+++|++|++||++||+||||||||||+++|+|...+ .+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p--~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKP--DEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEEe----
Confidence 488999998773 1 248999999999999999999999999999999997654 47999885
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 894 KQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 894 ~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.+++.+..+..+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 1479999998888899999999864211 111 124688999999987766654 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++||+. .+...+|++++|+ |++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~--~~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE--GEPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc--Ccceeeeec
Confidence 999999999999999999999999999999999999999764 899999999986 5777899999996 477777775
Q ss_pred CCC---chHHHHhhhcC
Q 000576 1053 GRH---SSHLIKYFEGN 1066 (1412)
Q Consensus 1053 ~~~---~~~~~~yF~~~ 1066 (1412)
... ...+..|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 322 12345566665
No 41
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.5e-55 Score=559.38 Aligned_cols=201 Identities=24% Similarity=0.352 Sum_probs=161.6
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.|+ .+.+|+|+|+.|++|+++||+|||||||||||++|+|...+ .+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQA--DSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEE-CCCc
Confidence 589999998874 24699999999999999999999999999999999997553 4799998 4321
Q ss_pred CcccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCCCCCCCHHH
Q 000576 894 KQETFARISGYCEQND-IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN-LLRQALVGLPGVNGLSTEQ 971 (1412)
Q Consensus 894 ~~~~~~~~~~yv~Q~~-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~lSgGq 971 (1412)
.+||++|+. .+.+.+||.|++.+..... ... .....+.++++.+++. +..+..+ ..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 489999975 5788999999998653210 011 1123467888888885 3445443 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEE-EEEc
Q 000576 972 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQE-IYVG 1050 (1412)
Q Consensus 972 rqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~-~y~G 1050 (1412)
||||+||++|+.+|++|||||||+|||..+...+.+.|+++ +.|||++||++. .+...||++++|...|++ .|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999976 577889999999733554 4555
Q ss_pred C
Q 000576 1051 P 1051 (1412)
Q Consensus 1051 ~ 1051 (1412)
.
T Consensus 522 ~ 522 (635)
T PRK11147 522 G 522 (635)
T ss_pred C
Confidence 4
No 42
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.9e-53 Score=515.74 Aligned_cols=504 Identities=25% Similarity=0.300 Sum_probs=342.0
Q ss_pred cccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCc
Q 000576 159 LSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVH 238 (1412)
Q Consensus 159 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~ 238 (1412)
++..++.+++|+|+|+.+.+|+.++|||+|||||||||++|+|.+.|+ +|+|...+. .+++|++|+...
T Consensus 9 ls~~~g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~~--------~~v~~l~Q~~~~ 77 (530)
T COG0488 9 LSLAYGDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPKG--------LRVGYLSQEPPL 77 (530)
T ss_pred eEEeeCCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecCC--------ceEEEeCCCCCc
Confidence 445567788999999999999999999999999999999999999987 799988752 379999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHH---H-HHHHHhhhhhhhHHHHHHHHHhCCCcccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDV---F-MKAAATEGQEASVVTDYILKILGLDVCAD 314 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~il~~lgL~~~~d 314 (1412)
.+..||.+.+.-+... .++...+...... ..++++... + ......++++.+..++.+|..||++.. +
T Consensus 78 ~~~~tv~~~v~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~ 148 (530)
T COG0488 78 DPEKTVLDYVIEGFGE-----LRELLAELEEAYA---LLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-D 148 (530)
T ss_pred CCCccHHHHHHhhhHH-----HHHHHHHHHHHHH---hcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-c
Confidence 8899999999876431 2222222222211 112221111 1 122234556677788999999999877 6
Q ss_pred ccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000576 315 TMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFD 394 (1412)
Q Consensus 315 t~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D 394 (1412)
+.++ .||||||.||+||++|+.+|++|+|||||++||..+...+-+.|++ ..+ ++|+++|+....-+.|+
T Consensus 149 ~~~~-----~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~----~~g-tviiVSHDR~FLd~V~t 218 (530)
T COG0488 149 RPVS-----SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKR----YPG-TVIVVSHDRYFLDNVAT 218 (530)
T ss_pred Cchh-----hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh----CCC-cEEEEeCCHHHHHHHhh
Confidence 6665 6999999999999999999999999999999999996666666654 456 66669999999999999
Q ss_pred eEEEEeCCeE-EEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchhh
Q 000576 395 DIILISDGQI-VYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVGQ 473 (1412)
Q Consensus 395 ~vivL~~G~i-v~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1412)
+|+-++.|++ .|.|.++...+.-+. ..-++....+.+++ ......++.+.+...
T Consensus 219 ~I~~ld~g~l~~y~Gny~~~~~~r~~------------~~~~~~~~~~~~~~---------~~~~~~~~i~r~~~~---- 273 (530)
T COG0488 219 HILELDRGKLTPYKGNYSSYLEQKAE------------RLRQEAAAYEKQQK---------ELAKEQEWIRRGKAA---- 273 (530)
T ss_pred heEEecCCceeEecCCHHHHHHHHHH------------HHHHHHHHHHHHHH---------HHHHHHHHHHHHHhc----
Confidence 9999999987 688888776542111 00000000000000 000011122222110
Q ss_pred hhhhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCccc
Q 000576 474 ILGDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSVT 553 (1412)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~~ 553 (1412)
.+ . + .+-+ .|.-..-+..
T Consensus 274 -------------~~-----~------~--k~a~---sr~k~l~k~~--------------------------------- 291 (530)
T COG0488 274 -------------AS-----K------A--KKAK---SRIKRLEKLE--------------------------------- 291 (530)
T ss_pred -------------cc-----h------H--HHHH---HHHHHHHHHH---------------------------------
Confidence 00 0 0 0000 0000000000
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCCC
Q 000576 554 DGVIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDPN 633 (1412)
Q Consensus 554 ~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~~ 633 (1412)
. .+..
T Consensus 292 -----------------------------~------~~~~---------------------------------------- 296 (530)
T COG0488 292 -----------------------------A------RLAE---------------------------------------- 296 (530)
T ss_pred -----------------------------h------hhhh----------------------------------------
Confidence 0 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHHH
Q 000576 634 AGRFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAIM 713 (1412)
Q Consensus 634 ~~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al~ 713 (1412)
.+
T Consensus 297 ------------------------------------------------------~~------------------------ 298 (530)
T COG0488 297 ------------------------------------------------------ER------------------------ 298 (530)
T ss_pred ------------------------------------------------------cc------------------------
Confidence 00
Q ss_pred HHHhcCCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccc
Q 000576 714 VNEFLGHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSLE 793 (1412)
Q Consensus 714 ~nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~~ 793 (1412)
+.... .+.
T Consensus 299 ------------~~~~~-----------------------------------------------------------~~~- 306 (530)
T COG0488 299 ------------PVEEG-----------------------------------------------------------KPL- 306 (530)
T ss_pred ------------ccccc-----------------------------------------------------------ccc-
Confidence 00000 000
Q ss_pred cccccCCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhh
Q 000576 794 TITEANQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVL 873 (1412)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L 873 (1412)
... ..... .+..+..++++|+++.|+ +.+.+++++||.|.+|+.+||+||||+||||||++|
T Consensus 307 ~~~-f~~~~-----~~~g~~vl~~~~~~~~y~------------~~~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l 368 (530)
T COG0488 307 AFR-FPPPG-----KRLGKLVLEFENVSKGYD------------GGRLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLL 368 (530)
T ss_pred eee-ccCCc-----ccCCCeeEEEeccccccC------------CCceeecCceEEecCCCEEEEECCCCCCHHHHHHHH
Confidence 000 00000 011234689999999885 225799999999999999999999999999999999
Q ss_pred cCCCCCCeEEEEEEEcCccCCcccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc
Q 000576 874 AGRKTTGYVTGNITISGYPKKQETFARISGYCEQND-IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN 952 (1412)
Q Consensus 874 ~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~yv~Q~~-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~ 952 (1412)
+|...+ .+|+|.+.-. -.+||..|+. .+.+..|+.|.+.-.. ++.. ...+...+..+++.
T Consensus 369 ~g~~~~--~~G~v~~g~~--------v~igyf~Q~~~~l~~~~t~~d~l~~~~-----~~~~----e~~~r~~L~~f~F~ 429 (530)
T COG0488 369 AGELGP--LSGTVKVGET--------VKIGYFDQHRDELDPDKTVLEELSEGF-----PDGD----EQEVRAYLGRFGFT 429 (530)
T ss_pred hhhccc--CCceEEeCCc--------eEEEEEEehhhhcCccCcHHHHHHhhC-----cccc----HHHHHHHHHHcCCC
Confidence 996543 3788887531 2479999986 3347889999885221 1111 34567788888886
Q ss_pred hhh-hcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHH
Q 000576 953 LLR-QALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1031 (1412)
Q Consensus 953 ~~~-~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~ 1031 (1412)
.-. .+. ++.||||||.||.+|+.++.+|.+|+|||||++||..+...+.+.|.+. ..|||+++||... +-
T Consensus 430 ~~~~~~~-----v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f---~Gtvl~VSHDr~F-l~ 500 (530)
T COG0488 430 GEDQEKP-----VGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF---EGTVLLVSHDRYF-LD 500 (530)
T ss_pred hHHHhCc-----hhhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC---CCeEEEEeCCHHH-HH
Confidence 532 222 4579999999999999999999999999999999999999999999876 4699999999874 77
Q ss_pred HhhccEeEEecCcEEEEEcC
Q 000576 1032 EAFDELFLLKRGGQEIYVGP 1051 (1412)
Q Consensus 1032 ~~fD~v~ll~~gG~~~y~G~ 1051 (1412)
..+++++++.+ +-..|.|.
T Consensus 501 ~va~~i~~~~~-~~~~~~g~ 519 (530)
T COG0488 501 RVATRIWLVED-KVEEFEGG 519 (530)
T ss_pred hhcceEEEEcC-ceeEcCCC
Confidence 88999999985 44444454
No 43
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=3e-53 Score=538.92 Aligned_cols=200 Identities=19% Similarity=0.275 Sum_probs=157.6
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.|+ +++.+|+|+|++|++|++++|+|||||||||||++|+|...+ .+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p--~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQP--SSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCceEEECCc--
Confidence 589999999873 123589999999999999999999999999999999997654 4799998752
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch-hhhcccCCCCCCCCCHHHH
Q 000576 894 KQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL-LRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 894 ~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~~~lSgGqr 972 (1412)
..+||++|+. .+.+++.++.........+ ... ++.+.++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHH--VDGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEeccc--cccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 3589999975 3445666664322111111 111 234678999999963 34433 357999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEE-EEcC
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI-YVGP 1051 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~-y~G~ 1051 (1412)
|||+||++|+.+|++|+|||||+|||+.+...+.+.|++. . .|||++||++. .+...||++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888765 3 49999999987 47778999999985 7887 7775
Q ss_pred C
Q 000576 1052 L 1052 (1412)
Q Consensus 1052 ~ 1052 (1412)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 3
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=4.4e-52 Score=478.67 Aligned_cols=466 Identities=21% Similarity=0.310 Sum_probs=364.6
Q ss_pred hhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCcc----ceEEEE
Q 000576 157 NILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQ----RTAAYI 232 (1412)
Q Consensus 157 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv 232 (1412)
..++++++...+++|||+++++||++||+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..|+ .-||+|
T Consensus 8 ~~itK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMV 84 (501)
T COG3845 8 RGITKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMV 84 (501)
T ss_pred eccEEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEE
Confidence 34567778888999999999999999999999999999999999999998 89999999998765553 468999
Q ss_pred cCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcc
Q 000576 233 SQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVC 312 (1412)
Q Consensus 233 ~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~ 312 (1412)
.||..+++++||.|||..+..-... .+. + ..+....++.+.+.+||+..
T Consensus 85 hQHF~Lv~~lTV~ENiiLg~e~~~~-~~~-------------------~-----------~~~~~~~i~~l~~~yGl~vd 133 (501)
T COG3845 85 HQHFMLVPTLTVAENIILGLEPSKG-GLI-------------------D-----------RRQARARIKELSERYGLPVD 133 (501)
T ss_pred eeccccccccchhhhhhhcCccccc-ccc-------------------C-----------HHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999988642100 000 0 11233456778999999999
Q ss_pred ccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000576 313 ADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDL 392 (1412)
Q Consensus 313 ~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~ 392 (1412)
.|.+|++ ||=||||||.|-++|+.+|++|+|||||+-|-|....++++.|+++++ .|.+||.++|-..|+.+.
T Consensus 134 p~~~V~d-----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~--~G~tIi~ITHKL~Ev~~i 206 (501)
T COG3845 134 PDAKVAD-----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA--EGKTIIFITHKLKEVMAI 206 (501)
T ss_pred ccceeec-----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHHh
Confidence 9988885 999999999999999999999999999999999999999999999976 478888899999999999
Q ss_pred cCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhcCCCCCccCCHhHHHHHHHhcchh
Q 000576 393 FDDIILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKEEPYRFVTVKEFADAFQSFSVG 472 (1412)
Q Consensus 393 ~D~vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (1412)
+|++.||..|+++..-++ .. + .+.+++++.
T Consensus 207 aDrvTVLR~Gkvvgt~~~--~~--------------~---------------------------~t~~ela~l------- 236 (501)
T COG3845 207 ADRVTVLRRGKVVGTVDP--VA--------------E---------------------------TTEEELAEL------- 236 (501)
T ss_pred hCeeEEEeCCeEEeeecC--CC--------------C---------------------------CCHHHHHHH-------
Confidence 999999999998643210 00 0 000000000
Q ss_pred hhhhhhhCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcccCCCCCcc
Q 000576 473 QILGDELGIPFDKTKSHPAALTTKKYGVGKKESLKACNSRELLLMKRNSFVYFFKLFQLTTIALVTMTLFFRTKMHRDSV 552 (1412)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~ali~~tlf~~~~~~~~~~ 552 (1412)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcCCcchhhHHHHhHhhhhhHHHHHHHHHHhhhhhccccCC
Q 000576 553 TDGVIYAGATFFIIIMIMFNGMAEISMTIAKLPIFYKQRDLQFYPSWAYAFPTWIPKIPISFVEVAVWVFSTYYVIGFDP 632 (1412)
Q Consensus 553 ~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~pvf~k~r~~~~y~~~ay~l~~~l~~lp~~~~~~~i~~~i~Y~~~g~~~ 632 (1412)
|+|
T Consensus 237 --------------------------------------------------------------------------MvG--- 239 (501)
T COG3845 237 --------------------------------------------------------------------------MVG--- 239 (501)
T ss_pred --------------------------------------------------------------------------hcC---
Confidence 000
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcccccccChhhHHHHHHHHcHHHHHHHHH
Q 000576 633 NAGRFFRQYLLLLFVNQMASALFRLIAATGRNLVVANTFGAFALLLLYALGGFVLNREDIKSWWIWAYWCSPLMYAQNAI 712 (1412)
Q Consensus 633 ~~~~ff~~~l~~~l~~~~~~~l~~~i~~~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~w~~~isp~~ya~~al 712 (1412)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhcCCcccccCCCCCCchhHHHhhccCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccc
Q 000576 713 MVNEFLGHSWRKILPNTTEPLGVEVLQSRGFFTDSYWYWLGVGALLGFIILFNIGFALALSFLNWSADDIRRRDSSSQSL 792 (1412)
Q Consensus 713 ~~nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~L~g~~~~f~i~~~l~l~~l~~~~~~~~~~~~~~~~~ 792 (1412)
.++. .+.
T Consensus 240 ----------------------~~v~---------------------------------------------------~~~ 246 (501)
T COG3845 240 ----------------------REVV---------------------------------------------------LRV 246 (501)
T ss_pred ----------------------Cccc---------------------------------------------------ccc
Confidence 0000 000
Q ss_pred ccccccCCccCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhh
Q 000576 793 ETITEANQPKRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDV 872 (1412)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~ 872 (1412)
. .....|. +..++++|++..-+. ....+++|||.+++||++||.|..|-|.+.|+.+
T Consensus 247 ------~----~~~~~pg-~~vL~V~~L~v~~~~------------~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~ea 303 (501)
T COG3845 247 ------V----KPPSTPG-EVVLEVEDLSVKDRR------------GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEA 303 (501)
T ss_pred ------c----cCCCCCC-CeEEEEeeeEeecCC------------CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHH
Confidence 0 0000011 236889999865431 2357999999999999999999999999999999
Q ss_pred hcCCCCCCeEEEEEEEcCccC----Cccc-ccceEEEeccCCC---CCCCCCHHHHHHHHHHhcC----CCCCCHHHHHH
Q 000576 873 LAGRKTTGYVTGNITISGYPK----KQET-FARISGYCEQNDI---HSPQVTVYESLLYSAWLRL----SPEVDSKTRKM 940 (1412)
Q Consensus 873 L~g~~~~~~~~G~i~i~g~~~----~~~~-~~~~~~yv~Q~~~---~~~~lTv~E~l~f~a~lr~----~~~~~~~~~~~ 940 (1412)
|+|...+ .+|+|.++|.++ +... .+.-++|||.|.. +.+.+|+.||+.+...-+. ..-......++
T Consensus 304 isGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~ 381 (501)
T COG3845 304 ISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRK 381 (501)
T ss_pred HhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHH
Confidence 9997644 249999999986 2222 2346899999864 5789999999987643221 11234455667
Q ss_pred HHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEE
Q 000576 941 FIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 1020 (1412)
Q Consensus 941 ~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi 1020 (1412)
...++++.++....... ...+.||||++||+-+||+|.++|++|+..+||.|||..+.+.|.+.|.+.++.|+.|+
T Consensus 382 ~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVL 457 (501)
T COG3845 382 FARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVL 457 (501)
T ss_pred HHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEE
Confidence 78889999887632211 12467999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcHHHHHhhccEeEEecCcEEEEEcCCCC
Q 000576 1021 CTIHQPSIDIFEAFDELFLLKRGGQEIYVGPLGR 1054 (1412)
Q Consensus 1021 ~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~~~ 1054 (1412)
+++-+.+ ++++++|||.+|.+ |+++...++.+
T Consensus 458 LiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~~ 489 (501)
T COG3845 458 LISEDLD-EILELSDRIAVIYE-GRIVGIVPPEE 489 (501)
T ss_pred EEehhHH-HHHHhhheeeeeeC-Cceeccccccc
Confidence 9999987 79999999999995 89998887743
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-44 Score=375.96 Aligned_cols=229 Identities=25% Similarity=0.397 Sum_probs=195.5
Q ss_pred hhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCc----CccceEEEE
Q 000576 157 NILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEF----VPQRTAAYI 232 (1412)
Q Consensus 157 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv 232 (1412)
+++.+++++..+|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|.++... ..++.+|+|
T Consensus 6 ~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmV 82 (240)
T COG1126 6 KNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMV 82 (240)
T ss_pred EeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCee
Confidence 45667788889999999999999999999999999999999999999987 89999999766321 235789999
Q ss_pred cCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcc
Q 000576 233 SQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVC 312 (1412)
Q Consensus 233 ~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~ 312 (1412)
+|+..+||++||.||+..+...-. ....++++.....+|+.+||.+.
T Consensus 83 FQ~fnLFPHlTvleNv~lap~~v~---------------------------------~~~k~eA~~~A~~lL~~VGL~~k 129 (240)
T COG1126 83 FQQFNLFPHLTVLENVTLAPVKVK---------------------------------KLSKAEAREKALELLEKVGLADK 129 (240)
T ss_pred cccccccccchHHHHHHhhhHHHc---------------------------------CCCHHHHHHHHHHHHHHcCchhh
Confidence 999999999999999998743110 01122344556778999999998
Q ss_pred ccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000576 313 ADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDL 392 (1412)
Q Consensus 313 ~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~ 392 (1412)
+|.+ +..|||||||||+|||||+.+|+++++|||||+|||....++.+.++++++ .|.|.+.++|....+.+.
T Consensus 130 a~~y-----P~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~--eGmTMivVTHEM~FAr~V 202 (240)
T COG1126 130 ADAY-----PAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE--EGMTMIIVTHEMGFAREV 202 (240)
T ss_pred hhhC-----ccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH--cCCeEEEEechhHHHHHh
Confidence 8755 457999999999999999999999999999999999999999999999987 467777799999999999
Q ss_pred cCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHh
Q 000576 393 FDDIILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQE 436 (1412)
Q Consensus 393 ~D~vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~ 436 (1412)
+|||+.|++|+++.+|+++++ |..|.+....+|+..
T Consensus 203 adrviFmd~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 203 ADRVIFMDQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred hheEEEeeCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 999999999999999999987 456766666677654
No 46
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=3.7e-43 Score=404.89 Aligned_cols=203 Identities=19% Similarity=0.265 Sum_probs=156.6
Q ss_pred CceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCc
Q 000576 812 PHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGY 891 (1412)
Q Consensus 812 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~ 891 (1412)
|..+.++|+++.|+. +..++++++|-|.+++.+|++||||+||||||+++.|...+ ..|.|.-.-+
T Consensus 387 ~pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H 452 (614)
T KOG0927|consen 387 PPVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSH 452 (614)
T ss_pred CCeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--cccccccccc
Confidence 446889999998862 22589999999999999999999999999999999997654 3576654322
Q ss_pred cCCcccccceEEEeccC--CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 892 PKKQETFARISGYCEQN--DIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 892 ~~~~~~~~~~~~yv~Q~--~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
. ..++-.|. +.+.-+.++-|++.=. ..++.+.+.+..++..+||....+.. ..+.||+
T Consensus 453 ~--------~~~~y~Qh~~e~ldl~~s~le~~~~~--------~~~~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~ 512 (614)
T KOG0927|consen 453 N--------KLPRYNQHLAEQLDLDKSSLEFMMPK--------FPDEKELEEMRSILGRFGLTGDAQVV----PMSQLSD 512 (614)
T ss_pred c--------cchhhhhhhHhhcCcchhHHHHHHHh--------ccccchHHHHHHHHHHhCCCcccccc----chhhccc
Confidence 1 12333333 3344456666665421 11133455678889999998544432 1468999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
|||+||..|+.++..|.+|+|||||+|||..+...+.+.|.+. ..+||.++||-. -|-+.++++.+..+++...+.
T Consensus 513 Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfr-lI~qVaeEi~~c~~~~~~~~~ 588 (614)
T KOG0927|consen 513 GQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFR-LISQVAEEIWVCENGTVTKWD 588 (614)
T ss_pred ccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhh-HHHHHHHHhHhhccCceeecC
Confidence 9999999999999999999999999999999999999998765 458999999976 377789999999999999998
Q ss_pred cCC
Q 000576 1050 GPL 1052 (1412)
Q Consensus 1050 G~~ 1052 (1412)
|..
T Consensus 589 G~i 591 (614)
T KOG0927|consen 589 GDI 591 (614)
T ss_pred ccH
Confidence 874
No 47
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.6e-43 Score=363.04 Aligned_cols=215 Identities=25% Similarity=0.358 Sum_probs=189.9
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.|+++|++++|. ...+|+|||++|++||+++|+|||||||||||++|.+...+ .+|+|.++|.+.
T Consensus 2 mi~i~~l~K~fg-------------~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~--~~G~I~i~g~~~ 66 (240)
T COG1126 2 MIEIKNLSKSFG-------------DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEP--DSGSITVDGEDV 66 (240)
T ss_pred eEEEEeeeEEeC-------------CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCC--CCceEEECCEec
Confidence 378999998884 46799999999999999999999999999999999997654 479999999754
Q ss_pred C----cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 K----QETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~----~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
. -...++.+|+|+|+..++|++||.||+..+...- ...+.++.++...+.|+.+||.+.+|... ..|||
T Consensus 67 ~~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSG 139 (240)
T COG1126 67 GDKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSG 139 (240)
T ss_pred cchhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCc
Confidence 3 2346788999999999999999999999875432 23456666777889999999999988774 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
||||||+|||||+.+|+++++|||||.|||+....+.+.+++++++|.|.||+||+... .-+.+||++.|++ |+++..
T Consensus 140 GQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~ 217 (240)
T COG1126 140 GQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEE 217 (240)
T ss_pred HHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999874 6778999999985 899999
Q ss_pred cCC
Q 000576 1050 GPL 1052 (1412)
Q Consensus 1050 G~~ 1052 (1412)
|++
T Consensus 218 g~p 220 (240)
T COG1126 218 GPP 220 (240)
T ss_pred cCH
Confidence 976
No 48
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-42 Score=363.47 Aligned_cols=218 Identities=26% Similarity=0.405 Sum_probs=193.8
Q ss_pred hhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEc
Q 000576 157 NILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYIS 233 (1412)
Q Consensus 157 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~ 233 (1412)
++++++++++.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||+++.+.+. ++.+|||-
T Consensus 5 ~nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYvi 81 (309)
T COG1125 5 ENVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVI 81 (309)
T ss_pred eeeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhh
Confidence 45566777889999999999999999999999999999999999999998 8999999999987654 68999999
Q ss_pred CCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccc
Q 000576 234 QHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCA 313 (1412)
Q Consensus 234 Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 313 (1412)
|+-.+||++||.|||.+-..+.+.. .++.+.+++++|+.+||+..
T Consensus 82 QqigLFPh~Tv~eNIa~VP~L~~w~----------------------------------k~~i~~r~~ELl~lvgL~p~- 126 (309)
T COG1125 82 QQIGLFPHLTVAENIATVPKLLGWD----------------------------------KERIKKRADELLDLVGLDPS- 126 (309)
T ss_pred hhcccCCCccHHHHHHhhhhhcCCC----------------------------------HHHHHHHHHHHHHHhCCCHH-
Confidence 9999999999999999877665431 12345568899999999852
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000576 314 DTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLF 393 (1412)
Q Consensus 314 dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~ 393 (1412)
...+++++.|||||+|||.+||||+.+|+|++||||+++|||-++.++.+.++++-+.. ++||+.++|+.+|+++++
T Consensus 127 --~~~~RyP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l-~kTivfVTHDidEA~kLa 203 (309)
T COG1125 127 --EYADRYPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKEL-GKTIVFVTHDIDEALKLA 203 (309)
T ss_pred --HHhhcCchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHhhh
Confidence 23467788999999999999999999999999999999999999999999999986654 677777999999999999
Q ss_pred CeEEEEeCCeEEEecChhhHHH
Q 000576 394 DDIILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 394 D~vivL~~G~iv~~G~~~~~~~ 415 (1412)
|||.+|++|+++..+++++++.
T Consensus 204 dri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 204 DRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred ceEEEecCCeEEEeCCHHHHHh
Confidence 9999999999999999999874
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-42 Score=374.96 Aligned_cols=223 Identities=26% Similarity=0.371 Sum_probs=195.9
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc------cceEEEEcCCCCc
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP------QRTAAYISQHDVH 238 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~ 238 (1412)
...+|+|||++|++|++.+|+|.||||||||++++.++-.|+ +|+|.++|.++..... ++.+|+++|+..+
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnL 94 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNL 94 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEeccccc
Confidence 467999999999999999999999999999999999999998 8999999988876543 4789999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
+.+.||.||++|..+..+.. +.+.+.++.++|+.+||++.+|..
T Consensus 95 LssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~~y-- 138 (339)
T COG1135 95 LSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKADRY-- 138 (339)
T ss_pred cccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhccC--
Confidence 99999999999998776531 123456778899999999888754
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
+.+|||||||||+|||||+.+|+||+.|||||+|||.|+..|++.|+++.+.. +.||+.++|.++-+-+.||||.+
T Consensus 139 ---P~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVav 214 (339)
T COG1135 139 ---PAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVAV 214 (339)
T ss_pred ---chhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhheE
Confidence 45799999999999999999999999999999999999999999999997754 78888899999999999999999
Q ss_pred EeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhc
Q 000576 399 ISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVT 438 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~ 438 (1412)
|++|+++++|+..++ |..|.+.-..+|+.+..
T Consensus 215 m~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 215 LDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred eeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 999999999999988 44566666666666544
No 50
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.5e-42 Score=389.04 Aligned_cols=227 Identities=29% Similarity=0.424 Sum_probs=199.9
Q ss_pred hcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCcc-ceEEEEcCCC
Q 000576 158 ILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQ-RTAAYISQHD 236 (1412)
Q Consensus 158 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d 236 (1412)
++.+.+++..+|+|+|++|++||+++|+|||||||||||++|||+.+|+ +|+|.++|+++++..|+ |.+|+|+|+.
T Consensus 8 ~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~y 84 (338)
T COG3839 8 NVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNY 84 (338)
T ss_pred eeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCc
Confidence 3445555544999999999999999999999999999999999999998 89999999999998775 8899999999
Q ss_pred CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccc
Q 000576 237 VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 316 (1412)
Q Consensus 237 ~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 316 (1412)
.++|+|||+|||.|+.+.++.. .++.+.+++++.+.|+|++..|.+
T Consensus 85 ALyPhmtV~~Niaf~Lk~~~~~----------------------------------k~ei~~rV~eva~~L~l~~lL~r~ 130 (338)
T COG3839 85 ALYPHMTVYENIAFGLKLRGVP----------------------------------KAEIDKRVKEVAKLLGLEHLLNRK 130 (338)
T ss_pred cccCCCcHHHHhhhhhhhCCCc----------------------------------hHHHHHHHHHHHHHcCChhHHhcC
Confidence 9999999999999998876531 123455678899999999988755
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
+++|||||||||++||||+.+|++++||||+|.||+..+.++...++++.+. -++|+|.++|+..|+..++|+|
T Consensus 131 -----P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~-l~~T~IYVTHDq~EAmtladri 204 (338)
T COG3839 131 -----PLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHER-LGTTTIYVTHDQVEAMTLADRI 204 (338)
T ss_pred -----cccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHh-cCCcEEEEcCCHHHHHhhCCEE
Confidence 4579999999999999999999999999999999999999999999997554 4677888999999999999999
Q ss_pred EEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHH
Q 000576 397 ILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQ 435 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ 435 (1412)
.+|++|+|...|++.++. ..|.+.-+|.|+-
T Consensus 205 ~Vm~~G~i~Q~g~p~ely--------~~P~n~fVA~FiG 235 (338)
T COG3839 205 VVMNDGRIQQVGTPLELY--------ERPANLFVAGFIG 235 (338)
T ss_pred EEEeCCeeeecCChHHHh--------hCccchhhhhhcC
Confidence 999999999999999984 4677777777754
No 51
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3e-41 Score=388.57 Aligned_cols=224 Identities=31% Similarity=0.443 Sum_probs=195.8
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++ .++.+|+||||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~ 69 (293)
T COG1131 4 VIEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDV 69 (293)
T ss_pred eeeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeC
Confidence 467889998874 135799999999999999999999999999999999997765 589999999886
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHH
Q 000576 894 KQ--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQ 971 (1412)
Q Consensus 894 ~~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGq 971 (1412)
.. ...++.+||++|++.+++.+||+|+|.|.+.++.+.. ...+++++++++.++|.+.++.. +++||+||
T Consensus 70 ~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~ 141 (293)
T COG1131 70 VKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGM 141 (293)
T ss_pred ccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHH
Confidence 54 4567789999999999999999999999999987643 34556799999999999855444 35799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 972 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 972 rqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
|||++||+||+++|++|||||||+|||+.++..+.+.|++++++| +||+++||+++ ++...||+|++|++ |++++.|
T Consensus 142 kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g 219 (293)
T COG1131 142 KQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEG 219 (293)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeC
Confidence 999999999999999999999999999999999999999999887 89999999997 68888999999985 8999999
Q ss_pred CCCCCchHHHHhhhc
Q 000576 1051 PLGRHSSHLIKYFEG 1065 (1412)
Q Consensus 1051 ~~~~~~~~~~~yF~~ 1065 (1412)
+. .++...+..
T Consensus 220 ~~----~~l~~~~~~ 230 (293)
T COG1131 220 TP----EELKEKFGG 230 (293)
T ss_pred CH----HHHHHhhcc
Confidence 76 445555543
No 52
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=389.77 Aligned_cols=230 Identities=29% Similarity=0.433 Sum_probs=203.3
Q ss_pred hcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCcc-ceEEEEcCCC
Q 000576 158 ILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQ-RTAAYISQHD 236 (1412)
Q Consensus 158 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d 236 (1412)
++++.++...+|+|+|++|++||+++|+|||||||||||++|||+..|+ +|+|.++|++++...+. |.+++|+|+-
T Consensus 10 ~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~Y 86 (352)
T COG3842 10 NVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSY 86 (352)
T ss_pred eeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCc
Confidence 3455667788999999999999999999999999999999999999998 89999999999988774 7899999999
Q ss_pred CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccc
Q 000576 237 VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 316 (1412)
Q Consensus 237 ~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 316 (1412)
.+||+|||+||+.|+.+.++... ..+.+.+++++|+.++|++.++
T Consensus 87 ALFPHltV~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~-- 131 (352)
T COG3842 87 ALFPHMTVEENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFAD-- 131 (352)
T ss_pred ccCCCCcHHHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhh--
Confidence 99999999999999987432110 1124457888999999998765
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
+.+..|||||||||+|||||+.+|++|+||||.|+||..-+.++...++++.+.. +.|.|.++|+..|++.++|||
T Consensus 132 ---R~p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI 207 (352)
T COG3842 132 ---RKPHQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRI 207 (352)
T ss_pred ---hChhhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccce
Confidence 4455799999999999999999999999999999999999999999999997765 777888999999999999999
Q ss_pred EEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhh
Q 000576 397 ILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEV 437 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v 437 (1412)
.+|++|+|...|+++++ |..|...-+|+|+.+.
T Consensus 208 ~Vm~~G~I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 208 AVMNDGRIEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred EEccCCceeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 99999999999999998 5578888888988754
No 53
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-41 Score=367.30 Aligned_cols=230 Identities=29% Similarity=0.456 Sum_probs=194.7
Q ss_pred hcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCc---cCCCcCc-cceEEEEc
Q 000576 158 ILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGH---NMDEFVP-QRTAAYIS 233 (1412)
Q Consensus 158 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~---~~~~~~~-~~~~~yv~ 233 (1412)
+.++..+...+++|||+.|+.||+++++|||||||||||++|||+..|+ +|+|.+||+ +.+.... .|.+|||+
T Consensus 7 ~~~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvF 83 (345)
T COG1118 7 NVKKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVF 83 (345)
T ss_pred hhhhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEE
Confidence 4455667788999999999999999999999999999999999999998 799999999 5555333 38899999
Q ss_pred CCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccc
Q 000576 234 QHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCA 313 (1412)
Q Consensus 234 Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 313 (1412)
|+..+|++|||.|||+||.+++.. .|+ ..+.+..++++|+.+.|++.+
T Consensus 84 Q~YALF~HmtVa~NIAFGl~~~~~-------------------~p~-------------~~~~r~rv~elL~lvqL~~la 131 (345)
T COG1118 84 QHYALFPHMTVADNIAFGLKVRKE-------------------RPS-------------EAEIRARVEELLRLVQLEGLA 131 (345)
T ss_pred echhhcccchHHhhhhhccccccc-------------------CCC-------------hhhHHHHHHHHHHHhcccchh
Confidence 999999999999999999876521 111 113345677889999998765
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000576 314 DTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLF 393 (1412)
Q Consensus 314 dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~ 393 (1412)
+ +++.+|||||||||++||||+..|++|+||||+++||.+.+..+-++|+++.... +.+.+.++|+..|+++++
T Consensus 132 ~-----ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~-~~ttvfVTHD~eea~~la 205 (345)
T COG1118 132 D-----RYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRL-GVTTVFVTHDQEEALELA 205 (345)
T ss_pred h-----cCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhh-CceEEEEeCCHHHHHhhc
Confidence 5 6677899999999999999999999999999999999999999999999986654 555666999999999999
Q ss_pred CeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHh
Q 000576 394 DDIILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQE 436 (1412)
Q Consensus 394 D~vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~ 436 (1412)
|+|++|++|+|...||++|+. ..|...-+..|+-+
T Consensus 206 drvvvl~~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 206 DRVVVLNQGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred ceEEEecCCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 999999999999999999984 34655555555544
No 54
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-40 Score=352.41 Aligned_cols=232 Identities=26% Similarity=0.387 Sum_probs=200.1
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..+++++|++++. .+.|++|||++|++||+++||||||+||||||+.|.|...+ .+|+|.++|.+
T Consensus 7 ~~I~vr~v~~~fG-------------~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~ 71 (263)
T COG1127 7 PLIEVRGVTKSFG-------------DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGED 71 (263)
T ss_pred ceEEEeeeeeecC-------------CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcc
Confidence 3689999998873 46899999999999999999999999999999999998765 47999999998
Q ss_pred CCc------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchh-hhcccCCCCCC
Q 000576 893 KKQ------ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLL-RQALVGLPGVN 965 (1412)
Q Consensus 893 ~~~------~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~~~ 965 (1412)
+.+ ...++.+|+++|+-.++..+||+||+.|. +|...+.+++..++.+..-++.+||... .+.. ..
T Consensus 72 i~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafp--lre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----Ps 144 (263)
T COG1127 72 IPQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFP--LREHTKLPESLIRELVLMKLELVGLRGAAADLY-----PS 144 (263)
T ss_pred hhccCHHHHHHHHhheeEEeeccccccccchhHhhhee--hHhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----ch
Confidence 643 23567899999999999999999999885 3444556677777788888999999876 4544 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
.||||+|||++|||||+.+|+|||+||||+||||.++..+-++|+++.++ |.|++++|||.+ +++..+|++++|.+ |
T Consensus 145 ELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-g 222 (263)
T COG1127 145 ELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-G 222 (263)
T ss_pred hhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999876 999999999987 68999999999996 8
Q ss_pred EEEEEcCCCC----CchHHHHhhhcCCC
Q 000576 1045 QEIYVGPLGR----HSSHLIKYFEGNPG 1068 (1412)
Q Consensus 1045 ~~~y~G~~~~----~~~~~~~yF~~~~g 1068 (1412)
+++..|++.+ +..-+.+||....+
T Consensus 223 kv~~~Gt~~el~~sd~P~v~qf~~G~~~ 250 (263)
T COG1127 223 KVIAEGTPEELLASDDPWVRQFFNGIRD 250 (263)
T ss_pred EEEEeCCHHHHHhCCCHHHHHHhcCCCC
Confidence 9999999842 22347788877543
No 55
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2e-41 Score=372.47 Aligned_cols=215 Identities=31% Similarity=0.423 Sum_probs=185.2
Q ss_pred cccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCcc---ceEEEEcCCCC
Q 000576 161 SRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQ---RTAAYISQHDV 237 (1412)
Q Consensus 161 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~ 237 (1412)
..++++++|+|+|+++++|++++|+||||||||||||+|+|.+.|. +|+|.++|+++.+...+ +.+|||||...
T Consensus 10 ~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~ 86 (258)
T COG1120 10 FGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPS 86 (258)
T ss_pred EEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCC
Confidence 3445678999999999999999999999999999999999999987 79999999999877653 78999999988
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
..+.+||+|-+.+|..-.. .. .. ...++....++..|+.+|+.+.++..+
T Consensus 87 ~~~~~tV~d~V~~GR~p~~--~~----------------~~------------~~~~~D~~~v~~aL~~~~~~~la~r~~ 136 (258)
T COG1120 87 APFGLTVYELVLLGRYPHL--GL----------------FG------------RPSKEDEEIVEEALELLGLEHLADRPV 136 (258)
T ss_pred CCCCcEEeehHhhcCCccc--cc----------------cc------------CCCHhHHHHHHHHHHHhCcHHHhcCcc
Confidence 8889999999999843210 00 00 001122335788899999999988666
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
. .|||||||||.|||||+++|++|+||||||+||...+.++++.++++++. ++.++|+++|+...+..+||+++
T Consensus 137 ~-----~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~-~~~tvv~vlHDlN~A~ryad~~i 210 (258)
T COG1120 137 D-----ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNRE-KGLTVVMVLHDLNLAARYADHLI 210 (258)
T ss_pred c-----ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEE
Confidence 5 69999999999999999999999999999999999999999999999864 46777779999999999999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000576 398 LISDGQIVYQGPREHVL 414 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~ 414 (1412)
+|++|+++++|++++++
T Consensus 211 ~lk~G~i~a~G~p~evl 227 (258)
T COG1120 211 LLKDGKIVAQGTPEEVL 227 (258)
T ss_pred EEECCeEEeecCcchhc
Confidence 99999999999998875
No 56
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-40 Score=363.95 Aligned_cols=218 Identities=23% Similarity=0.330 Sum_probs=192.0
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
+++++|++.+... ......+|+|||++|++||++||+|+||||||||++++.+...+ .+|+|.+||.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~P--tsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERP--TSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCC--CCceEEEcCEecc
Confidence 6789999777521 11245799999999999999999999999999999999997654 4899999997654
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 895 Q------ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 895 ~------~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
. ...++.+|+++|+..++.+.||+||+.|...+.. .++++.+++|.++++.+||.+.++... .+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRYP-----AQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccCc-----hhcC
Confidence 3 3467889999999999999999999999887764 567888999999999999998887763 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI 1047 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~ 1047 (1412)
|||||||+|||||+.+|+||++|||||.|||++...|.+.|+++.++ |.||+++||+++ -+-+.|||+.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999998755 999999999986 37778999999985 8999
Q ss_pred EEcCC
Q 000576 1048 YVGPL 1052 (1412)
Q Consensus 1048 y~G~~ 1052 (1412)
..|+.
T Consensus 222 E~G~v 226 (339)
T COG1135 222 EEGTV 226 (339)
T ss_pred EeccH
Confidence 99997
No 57
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-40 Score=360.89 Aligned_cols=217 Identities=28% Similarity=0.442 Sum_probs=185.6
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++|+ ++ .+|+|||+++++|++++|+||||||||||+++|.|...+ .+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~------------~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p--~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG------------NR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKP--SSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC------------CE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcC--CcceEEEccccc
Confidence 589999999985 22 599999999999999999999999999999999996654 489999999887
Q ss_pred CcccccceEEEeccCCCC--CCCCCHHHHHHHHHHhcCC--CCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQETFARISGYCEQNDIH--SPQVTVYESLLYSAWLRLS--PEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~~~~~~~~~yv~Q~~~~--~~~lTv~E~l~f~a~lr~~--~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
.+..-+..+|||||...+ ..-+||+|-+..+..-+.. .... ++.++.++++|+.+|+.+.+|..+| .|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQIG-----ELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCccc-----ccCc
Confidence 654445689999996422 2347999999876332221 1122 3336789999999999999998876 6999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
||+||+.|||||+.+|++|+|||||+|+|+.++..+.++|++++++|+||++++||++ .+.+.||+++.|+ +++++.
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~ 219 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIAS 219 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEec
Confidence 9999999999999999999999999999999999999999999988999999999998 5899999999997 589999
Q ss_pred cCCCC
Q 000576 1050 GPLGR 1054 (1412)
Q Consensus 1050 G~~~~ 1054 (1412)
|++.+
T Consensus 220 G~~~~ 224 (254)
T COG1121 220 GPPEE 224 (254)
T ss_pred cChhh
Confidence 99853
No 58
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2e-40 Score=350.35 Aligned_cols=216 Identities=25% Similarity=0.395 Sum_probs=185.5
Q ss_pred cccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc------cceEEEE
Q 000576 159 LSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP------QRTAAYI 232 (1412)
Q Consensus 159 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv 232 (1412)
+.++++.+.||+|||++|++||+++|+|||||||||||++|.|+++|+ +|+|.++|+++..... ++++|++
T Consensus 14 v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~Gvl 90 (263)
T COG1127 14 VTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVL 90 (263)
T ss_pred eeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEE
Confidence 345567888999999999999999999999999999999999999998 7999999999866543 4679999
Q ss_pred cCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcc
Q 000576 233 SQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVC 312 (1412)
Q Consensus 233 ~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~ 312 (1412)
+|+-.+|.++||+||+.|..+-... + | ....+..+..-|+.+||+..
T Consensus 91 FQ~gALFssltV~eNVafplre~~~---------l----------p--------------~~~i~~lv~~KL~~VGL~~~ 137 (263)
T COG1127 91 FQQGALFSSLTVFENVAFPLREHTK---------L----------P--------------ESLIRELVLMKLELVGLRGA 137 (263)
T ss_pred eeccccccccchhHhhheehHhhcc---------C----------C--------------HHHHHHHHHHHHHhcCCChh
Confidence 9999999999999999997543210 0 1 11223345556888999854
Q ss_pred ccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000576 313 ADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDL 392 (1412)
Q Consensus 313 ~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~ 392 (1412)
+.+.++..||||+|||++||||++.+|+++|+||||+||||.++..|.+.++++.+.. +.|+++++|+.++++..
T Consensus 138 ----~~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~l-g~T~i~VTHDl~s~~~i 212 (263)
T COG1127 138 ----AADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDAL-GLTVIMVTHDLDSLLTI 212 (263)
T ss_pred ----hhhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhh-CCEEEEEECChHHHHhh
Confidence 3456777899999999999999999999999999999999999999999999998765 56666699999999999
Q ss_pred cCeEEEEeCCeEEEecChhhHHH
Q 000576 393 FDDIILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 393 ~D~vivL~~G~iv~~G~~~~~~~ 415 (1412)
+|++++|.+|+|+.+|+++++.+
T Consensus 213 ~Drv~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 213 ADRVAVLADGKVIAEGTPEELLA 235 (263)
T ss_pred hceEEEEeCCEEEEeCCHHHHHh
Confidence 99999999999999999999864
No 59
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.3e-40 Score=379.92 Aligned_cols=219 Identities=32% Similarity=0.481 Sum_probs=190.8
Q ss_pred hhcccccc-cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCc--CccceEEEEc
Q 000576 157 NILSSRKK-HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEF--VPQRTAAYIS 233 (1412)
Q Consensus 157 ~~~~~~~~-~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~ 233 (1412)
++++++++ .+.+|+||||+|++|++++++||||||||||+|+|+|++.|+ +|+|.++|.+.... ..++.+||++
T Consensus 8 ~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~ 84 (293)
T COG1131 8 RNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVP 84 (293)
T ss_pred cceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEc
Confidence 45667777 689999999999999999999999999999999999999997 89999999887652 3357899999
Q ss_pred CCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccc
Q 000576 234 QHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCA 313 (1412)
Q Consensus 234 Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 313 (1412)
|++.+++.+||+||+.|.+++.+... ......++++++.+||++..
T Consensus 85 ~~~~~~~~lT~~e~l~~~~~l~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~ 130 (293)
T COG1131 85 QEPSLYPELTVRENLEFFARLYGLSK----------------------------------EEAEERIEELLELFGLEDKA 130 (293)
T ss_pred cCCCCCccccHHHHHHHHHHHhCCCh----------------------------------hHHHHHHHHHHHHcCCchhh
Confidence 99999999999999999988875421 01223567899999999844
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000576 314 DTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLF 393 (1412)
Q Consensus 314 dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~ 393 (1412)
++ .+++||+||||||+||.||+++|++|||||||+|||+.++.++.+.|+++++. ++++|+..+|...++..+|
T Consensus 131 ~~-----~~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~ 204 (293)
T COG1131 131 NK-----KVRTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELC 204 (293)
T ss_pred Cc-----chhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhC
Confidence 44 44579999999999999999999999999999999999999999999999864 3467777899999999999
Q ss_pred CeEEEEeCCeEEEecChhhHHHHHH
Q 000576 394 DDIILISDGQIVYQGPREHVLEFFE 418 (1412)
Q Consensus 394 D~vivL~~G~iv~~G~~~~~~~~f~ 418 (1412)
|+|++|++|++++.|+.+++...+.
T Consensus 205 d~v~il~~G~~~~~g~~~~l~~~~~ 229 (293)
T COG1131 205 DRVIILNDGKIIAEGTPEELKEKFG 229 (293)
T ss_pred CEEEEEeCCEEEEeCCHHHHHHhhc
Confidence 9999999999999999999876544
No 60
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.3e-35 Score=400.74 Aligned_cols=216 Identities=22% Similarity=0.361 Sum_probs=187.1
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++||++.++. +++.+|+|+|+.+++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~P--tsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPP--TSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCC--CceEEEECCEE
Confidence 46899999988741 235699999999999999999999999999999999997654 47999999988
Q ss_pred CCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHH
Q 000576 893 KKQ--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTE 970 (1412)
Q Consensus 893 ~~~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgG 970 (1412)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++.. ..++.++.++++++.++|.+..+..+ +.||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~---~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGR---SWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 643 23456799999999999999999999998766532 23344567899999999988877664 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 971 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 971 qrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
|||||+||+||+.+|+||+|||||+|||+.+++.+++.|+++. +|+|||++||+++ ++..++||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 5999999999986 57778999999995 8999999
Q ss_pred CC
Q 000576 1051 PL 1052 (1412)
Q Consensus 1051 ~~ 1052 (1412)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 86
No 61
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-40 Score=356.03 Aligned_cols=198 Identities=25% Similarity=0.372 Sum_probs=173.5
Q ss_pred ccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcC
Q 000576 160 SSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHI 239 (1412)
Q Consensus 160 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~ 239 (1412)
++.++...+|+|||++|++||+++|+||||||||||||+|+|+..|+ +|+|.++|.++. .+...++||+|++.++
T Consensus 10 ~~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~Ll 84 (248)
T COG1116 10 SKSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALL 84 (248)
T ss_pred EEEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCccc
Confidence 33445577999999999999999999999999999999999999998 799999999873 3567899999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
|-+||+||+.|+.+..+... .+....++..|+.+||....|
T Consensus 85 PW~Tv~~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~----- 125 (248)
T COG1116 85 PWLTVLDNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFED----- 125 (248)
T ss_pred chhhHHhhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhh-----
Confidence 99999999999987654211 112235678999999988776
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
+++..|||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+.. +.||+.++|+.+|+..++|||++|
T Consensus 126 ~~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~-~~TvllVTHdi~EAv~LsdRivvl 204 (248)
T COG1116 126 KYPHQLSGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEET-RKTVLLVTHDVDEAVYLADRVVVL 204 (248)
T ss_pred cCccccChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHhhhCEEEEe
Confidence 4556899999999999999999999999999999999999999999999998754 577777999999999999999999
Q ss_pred eCC
Q 000576 400 SDG 402 (1412)
Q Consensus 400 ~~G 402 (1412)
+++
T Consensus 205 ~~~ 207 (248)
T COG1116 205 SNR 207 (248)
T ss_pred cCC
Confidence 984
No 62
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.9e-40 Score=363.41 Aligned_cols=218 Identities=29% Similarity=0.420 Sum_probs=188.6
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++|+ ++.+|+|+||++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p--~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKP--KSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCCch
Confidence 478999999985 45799999999999999999999999999999999997654 479999999986
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCC-CCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPE-VDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~-~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
.. ..+.+.++|+||.....+.+||+|.+.++..-..... ...++..+.++++++.+++.++++..+ ..|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccCh
Confidence 54 4577899999999988899999999987743211111 112333457999999999999998765 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
|||||+.|||||+.+|+||+||||||.||...+..|++.++++.+ +|+|||+++||++. ...+||++++|++ |+++.
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 999999999999999999999999999999999999999999984 59999999999984 6788999999985 89999
Q ss_pred EcCCC
Q 000576 1049 VGPLG 1053 (1412)
Q Consensus 1049 ~G~~~ 1053 (1412)
.|++.
T Consensus 220 ~G~p~ 224 (258)
T COG1120 220 QGTPE 224 (258)
T ss_pred ecCcc
Confidence 99984
No 63
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=340.49 Aligned_cols=214 Identities=29% Similarity=0.389 Sum_probs=192.4
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
+++.+++.+|+. ..++++||||.++.||++||+|+|||||||+|++|++...+ .+|.|++||.+..
T Consensus 2 l~v~~l~K~y~~------------~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~ 67 (245)
T COG4555 2 LEVTDLTKSYGS------------KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTV 67 (245)
T ss_pred eeeeehhhhccC------------HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccc
Confidence 567888887753 23589999999999999999999999999999999997765 4899999999854
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 895 Q--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 895 ~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
. ...++.+|.++.+.-++..+|++|||.|.+.+.. ....+.+++++++.+.|+|.++.|+.+| ++|.|+|
T Consensus 68 ~~p~~vrr~IGVl~~e~glY~RlT~rEnl~~Fa~L~~---l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~k 139 (245)
T COG4555 68 RDPSFVRRKIGVLFGERGLYARLTARENLKYFARLNG---LSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMK 139 (245)
T ss_pred cChHHHhhhcceecCCcChhhhhhHHHHHHHHHHHhh---hhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhH
Confidence 3 4567889999977888999999999999998863 4556677889999999999999999876 7999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|||+|||||+++|++++|||||||||..+...+.+.++++.+.|++||+++|..+ ++.++||++++|++ |++++.|..
T Consensus 140 qkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~ 217 (245)
T COG4555 140 QKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSI 217 (245)
T ss_pred HHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCH
Confidence 9999999999999999999999999999999999999999988999999999986 78889999999996 899999987
No 64
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-40 Score=346.84 Aligned_cols=220 Identities=26% Similarity=0.341 Sum_probs=187.3
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++||+..|+ +++++|+|||+.|++||++||+|+|||||||||++|.|...+ .+|+|.++|.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~--t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDP--TSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCC--CcceEEecccch
Confidence 588999998884 356899999999999999999999999999999999996554 479999999764
Q ss_pred Cc------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCchhhhcccCCC
Q 000576 894 KQ------ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRL-----SPEVDSKTRKMFIEEVMELVELNLLRQALVGLP 962 (1412)
Q Consensus 894 ~~------~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~-----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~ 962 (1412)
.. ..+++.+||++|+..+.+.+||.+|+..+..-+. --....++.+...-+.++.+|+.+.+-...+
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~-- 146 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRAS-- 146 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhc--
Confidence 32 3457789999999999999999999986532211 1123334455667789999999988776643
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEe
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLK 1041 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~ 1041 (1412)
.|||||+|||+|||+|+.+|+||+.|||+++||+.++..||+.|+++.+ .|.|||++.||... ..++|||++-|+
T Consensus 147 ---~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 147 ---TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred ---cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 6999999999999999999999999999999999999999999999975 59999999999874 678999999998
Q ss_pred cCcEEEEEcCCCC
Q 000576 1042 RGGQEIYVGPLGR 1054 (1412)
Q Consensus 1042 ~gG~~~y~G~~~~ 1054 (1412)
+ |+++|.||..+
T Consensus 223 ~-G~ivfDg~~~e 234 (258)
T COG3638 223 A-GRIVFDGPASE 234 (258)
T ss_pred C-CcEEEeCChhh
Confidence 5 89999999854
No 65
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1e-39 Score=352.31 Aligned_cols=209 Identities=27% Similarity=0.433 Sum_probs=176.1
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++||+..|... .....+|++||+.|++||++||||||||||||||++|.|...+ .+|.|.++|.+..
T Consensus 2 i~~~~v~k~y~~~---------~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~ 70 (226)
T COG1136 2 IELKNVSKIYGLG---------GEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLT 70 (226)
T ss_pred cEEeeeEEEeccC---------CcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcC
Confidence 4578888777532 1225799999999999999999999999999999999997665 4799999997754
Q ss_pred c------ccc-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhh-cccCCCCCCC
Q 000576 895 Q------ETF-ARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQ-ALVGLPGVNG 966 (1412)
Q Consensus 895 ~------~~~-~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~-~~vg~~~~~~ 966 (1412)
. ..+ ++.+|||+|+-.+.|++||.||+.....+.... ...+++.++++++.+||.+..+ .. +..
T Consensus 71 ~l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~---~~~~~~~~~~l~~~lgl~~~~~~~~-----p~e 142 (226)
T COG1136 71 KLSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKS---AGRRKRAAEELLEVLGLEDRLLKKK-----PSE 142 (226)
T ss_pred cCCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCC---hhHHHHHHHHHHHhcCChhhhccCC-----chh
Confidence 2 123 457999999999999999999999876554322 2255667899999999986655 43 347
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 967 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 967 lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
|||||||||+|||||+.+|+||+.||||.+||+.++..|++.++++.++ |+|||++||||. +...|||++.|.+ |+
T Consensus 143 LSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~--lA~~~dr~i~l~d-G~ 219 (226)
T COG1136 143 LSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPE--LAKYADRVIELKD-GK 219 (226)
T ss_pred cCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHH--HHHhCCEEEEEeC-Ce
Confidence 9999999999999999999999999999999999999999999999865 999999999974 7889999999997 45
No 66
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.8e-40 Score=352.26 Aligned_cols=204 Identities=25% Similarity=0.369 Sum_probs=180.7
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.+.++++++++. ...+|+|||++|.+||+++|+|||||||||||++|+|..++ .+|+|.++|.++
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCccc
Confidence 478899998885 25799999999999999999999999999999999997765 479999999987
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 894 KQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 894 ~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
.. ....+|||+|++.++|.+||+||+.++...+. ...+++++.+++.++.+||.+..|... ..|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~P-----~qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKYP-----HQLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcCc-----cccChHHHH
Confidence 32 34568999999999999999999999877654 345566678999999999999988764 579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
||+|||||+.+|+||+||||.+.||+.|+..+++.|.++.+ .++||+++|||.+ |...+.|||++|+++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999864 5899999999987 677899999999864
No 67
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.1e-40 Score=393.91 Aligned_cols=226 Identities=23% Similarity=0.447 Sum_probs=191.9
Q ss_pred ceeEEEeeeeEEEEEecCCCCCCCchhhHHHHHHHHHhhhhhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHH
Q 000576 117 EIEVRFEHLKVEAEAYVGSRALPTFFNFCANIIEGLLNSLNILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLL 196 (1412)
Q Consensus 117 ~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL 196 (1412)
+..|+|+|+++.+.. +++.+||+|+||+|+|||.+||||||||||||+.
T Consensus 463 ~G~IeF~~VsFaYP~-------------------------------Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTia 511 (716)
T KOG0058|consen 463 QGVIEFEDVSFAYPT-------------------------------RPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIA 511 (716)
T ss_pred cceEEEEEeeeecCC-------------------------------CCCchhhcCceeeeCCCCEEEEECCCCCCHHHHH
Confidence 457999999997632 3456799999999999999999999999999999
Q ss_pred HHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHH
Q 000576 197 LALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKA 273 (1412)
Q Consensus 197 ~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~ 273 (1412)
++|..+++|+ +|+|.+||+|+.++++ ++.+|+|.|+|.+| +.||+|||.|+..
T Consensus 512 sLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLF-s~sI~eNI~YG~~-------------------- 567 (716)
T KOG0058|consen 512 SLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLF-SGSIRENIAYGLD-------------------- 567 (716)
T ss_pred HHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceee-cccHHHHHhcCCC--------------------
Confidence 9999999998 8999999999988876 48899999998766 5699999999853
Q ss_pred cCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCC
Q 000576 274 AGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEIST 353 (1412)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPts 353 (1412)
..+.|+.+.++. ....+|++.+ +++.+||.||+++. .||||||||++|||||+.+|.||||||.||
T Consensus 568 -----~~t~e~i~~AAk-----~ANah~FI~~---~p~gY~T~VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATS 633 (716)
T KOG0058|consen 568 -----NATDEEIEAAAK-----MANAHEFITN---FPDGYNTVVGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATS 633 (716)
T ss_pred -----CCCHHHHHHHHH-----HhChHHHHHh---CccccccccCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhh
Confidence 223333444432 2234566554 99999999999887 699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEEecChhhHHH
Q 000576 354 GLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 354 gLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G~~~~~~~ 415 (1412)
+||+.+...+.+.|.+..+ +.||++|.|... +.+.+|+|+++++|++++.|+++|+++
T Consensus 634 ALDaeSE~lVq~aL~~~~~---~rTVlvIAHRLS-TV~~Ad~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 634 ALDAESEYLVQEALDRLMQ---GRTVLVIAHRLS-TVRHADQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred hcchhhHHHHHHHHHHhhc---CCeEEEEehhhh-HhhhccEEEEEcCCeEEecccHHHHhh
Confidence 9999999999999998754 456666777764 557789999999999999999999975
No 68
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.4e-40 Score=346.37 Aligned_cols=213 Identities=24% Similarity=0.357 Sum_probs=190.4
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++|+||++.|. .+.+++|+|++|++||++.++|||||||||+|++|.+...+ .+|+|+|||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiep--t~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEP--TSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCC--CCceEEECCeecc
Confidence 68999998874 35799999999999999999999999999999999987664 4899999999876
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch--hhhcccCCCCCCCCCH
Q 000576 895 Q---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL--LRQALVGLPGVNGLST 969 (1412)
Q Consensus 895 ~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~vg~~~~~~lSg 969 (1412)
. ..++|.+|||-|.-.++|++||.||+.+-..+. ..++++.+++++|+++.++|.+ +.+.. ...|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 5 457889999999999999999999998876654 4567788889999999999975 55554 358999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
||+|||.+||||+++|+||+||||.+.||+-++..+++.++++.++ |+|||++|||.. +.+.+.||+.+|+ +|+++-
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEE
Confidence 9999999999999999999999999999999999999999998765 999999999987 7899999999998 589998
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
++++
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 8886
No 69
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=356.05 Aligned_cols=208 Identities=25% Similarity=0.417 Sum_probs=177.3
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCC--CcCCCCCH
Q 000576 167 TILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHD--VHIGEMTV 244 (1412)
Q Consensus 167 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d--~~~~~lTV 244 (1412)
++|+|||+.+++|++++|+||||||||||+|+|+|++.|. +|+|.++|.+......+.++|||||.. .+-+.+||
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV 94 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITV 94 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCH
Confidence 5999999999999999999999999999999999999987 799999999887766667999999953 34455799
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccccc
Q 000576 245 RETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRG 324 (1412)
Q Consensus 245 ~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~ 324 (1412)
+|.+..+.--+. ..++ .. ..+.+..++++|+.+|+.+.+|..+| .
T Consensus 95 ~d~V~~g~~~~~--g~~~---~~-------------------------~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~ 139 (254)
T COG1121 95 KDVVLLGRYGKK--GWFR---RL-------------------------NKKDKEKVDEALERVGMEDLRDRQIG-----E 139 (254)
T ss_pred HHHHHccCcccc--cccc---cc-------------------------cHHHHHHHHHHHHHcCchhhhCCccc-----c
Confidence 999998732111 0000 00 01123567889999999999998887 4
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeE
Q 000576 325 ISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQI 404 (1412)
Q Consensus 325 LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~i 404 (1412)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|.+.|+++.+. +.+|++++|+...+.++||+|+.| ++++
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~L-n~~~ 216 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICL-NRHL 216 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEE-cCee
Confidence 9999999999999999999999999999999999999999999999764 788888999999999999999999 5678
Q ss_pred EEecChhhHHH
Q 000576 405 VYQGPREHVLE 415 (1412)
Q Consensus 405 v~~G~~~~~~~ 415 (1412)
++.|+++++.+
T Consensus 217 ~~~G~~~~~~~ 227 (254)
T COG1121 217 IASGPPEEVLT 227 (254)
T ss_pred EeccChhhccC
Confidence 89999998753
No 70
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-40 Score=335.24 Aligned_cols=213 Identities=27% Similarity=0.323 Sum_probs=187.6
Q ss_pred cccccccce-eeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC--ccceEEEEcCC
Q 000576 159 LSSRKKHIT-ILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV--PQRTAAYISQH 235 (1412)
Q Consensus 159 ~~~~~~~~~-iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~ 235 (1412)
++++++.++ +++||||.++.||+++|+|||||||||+|++|++++.|+ +|+|+++|.+..... .++.+|.++.+
T Consensus 7 l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e 83 (245)
T COG4555 7 LTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGE 83 (245)
T ss_pred hhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCC
Confidence 344555444 899999999999999999999999999999999999998 899999999875432 35889999987
Q ss_pred CCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccc
Q 000576 236 DVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADT 315 (1412)
Q Consensus 236 d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 315 (1412)
..++..||+||||.|-+++.+.. ..+.+.+++.+.+.|+|.+|.|+
T Consensus 84 ~glY~RlT~rEnl~~Fa~L~~l~----------------------------------~~~~kari~~l~k~l~l~~~~~r 129 (245)
T COG4555 84 RGLYARLTARENLKYFARLNGLS----------------------------------RKEIKARIAELSKRLQLLEYLDR 129 (245)
T ss_pred cChhhhhhHHHHHHHHHHHhhhh----------------------------------hhHHHHHHHHHHHHhChHHHHHH
Confidence 89999999999999988775431 12344567889999999999999
Q ss_pred cccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000576 316 MVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDD 395 (1412)
Q Consensus 316 ~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~ 395 (1412)
.+| ++|-|+||||+|||||+.+|++++|||||||||..+...+.+.++++.. .+.+|+..+|.++|+..+||+
T Consensus 130 Rv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~--egr~viFSSH~m~EvealCDr 202 (245)
T COG4555 130 RVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN--EGRAVIFSSHIMQEVEALCDR 202 (245)
T ss_pred HHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc--CCcEEEEecccHHHHHHhhhe
Confidence 998 5999999999999999999999999999999999999999999999743 477888899999999999999
Q ss_pred EEEEeCCeEEEecChhhHHH
Q 000576 396 IILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 396 vivL~~G~iv~~G~~~~~~~ 415 (1412)
|++|++|++++.|+.+++.+
T Consensus 203 vivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 203 VIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred EEEEecCcEEEcCCHHHHHH
Confidence 99999999999999988754
No 71
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-40 Score=338.70 Aligned_cols=227 Identities=24% Similarity=0.371 Sum_probs=180.6
Q ss_pred ccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCC--CCCCceeEEEECCccCCCc-----CccceEEEE
Q 000576 160 SSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRLYGRVTYNGHNMDEF-----VPQRTAAYI 232 (1412)
Q Consensus 160 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv 232 (1412)
..+++.+.+|+|||+.|+++++||++|||||||||||++|....+ |..+++|+|.++|+++.+. ..++++|+|
T Consensus 14 ~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMV 93 (253)
T COG1117 14 NLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMV 93 (253)
T ss_pred eEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheee
Confidence 334567789999999999999999999999999999999998755 4567899999999998653 236899999
Q ss_pred cCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHH-HHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCc
Q 000576 233 SQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTEL-ARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDV 311 (1412)
Q Consensus 233 ~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~ 311 (1412)
+|.+.-|| +|++||+.|+.+..|... +.+.+. ....+. ...-|++=+.|.
T Consensus 94 FQkPnPFp-~SIydNVayG~r~~g~~~--~~ldeiVe~sLk~-----------------------AaLWdEVKDrL~--- 144 (253)
T COG1117 94 FQKPNPFP-MSIYDNVAYGLRLHGIKD--KELDEIVESSLKK-----------------------AALWDEVKDRLH--- 144 (253)
T ss_pred ccCCCCCC-chHHHHHHHhHHhhccch--HHHHHHHHHHHHH-----------------------hHhHHHhHHHhh---
Confidence 99999888 999999999999887643 111111 111110 011122222111
Q ss_pred cccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 000576 312 CADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYD 391 (1412)
Q Consensus 312 ~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~ 391 (1412)
+...+|||||+||++|||||+-+|+|||||||||+|||-++..|-+.+.++.+ .-||+.++|.+.++.+
T Consensus 145 --------~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaR 213 (253)
T COG1117 145 --------KSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAAR 213 (253)
T ss_pred --------CCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHH
Confidence 22347999999999999999999999999999999999999999999999853 4566669999999999
Q ss_pred hcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHH
Q 000576 392 LFDDIILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFL 434 (1412)
Q Consensus 392 ~~D~vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 434 (1412)
..|+...+..|++++.|+.+++ |..|.++...||+
T Consensus 214 vSD~taFf~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 214 VSDYTAFFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred HhHhhhhhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 9999999999999999999988 4456666666654
No 72
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=342.17 Aligned_cols=217 Identities=26% Similarity=0.366 Sum_probs=182.5
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc------cceEEEEcCCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP------QRTAAYISQHDV 237 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 237 (1412)
+++++|+|||++|++||+++|+|||||||||||++|.|..+++ +|+|.+||.++..... ++.+||++|+..
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~n 91 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFN 91 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCC
Confidence 6778999999999999999999999999999999999999987 8999999988765542 468999999999
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
+.+.+||.+|+..+..-+. +.++ .-.++.+. +.+...-..|+.+|+.+.+-++.
T Consensus 92 Lv~r~sv~~NVl~grl~~~--s~~~---------slfglfsk---------------~dk~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 92 LVPRLSVLENVLLGRLGYT--STWR---------SLFGLFSK---------------EDKAQALDALERVGILDKAYQRA 145 (258)
T ss_pred cccccHHHHHHHhhhcccc--hHHH---------HHhCCCCH---------------HHHHHHHHHHHHcCcHHHHHHHh
Confidence 9999999999998753221 1111 11122211 12223445789999998887776
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
+ +|||||+|||+|||||+.+|++++-|||+++||+.+++++++.|++.+.. .+.|++..+|..+-+.++||||+
T Consensus 146 ~-----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~-~g~Tvi~nLH~vdlA~~Y~~Rii 219 (258)
T COG3638 146 S-----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQE-DGITVIVNLHQVDLAKKYADRII 219 (258)
T ss_pred c-----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHH-cCCEEEEEechHHHHHHHHhhhe
Confidence 5 69999999999999999999999999999999999999999999999875 45666667888999999999999
Q ss_pred EEeCCeEEEecChhhHHH
Q 000576 398 LISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~~ 415 (1412)
-|++|+|+|+||++++.+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999988754
No 73
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6e-39 Score=326.06 Aligned_cols=213 Identities=25% Similarity=0.346 Sum_probs=184.4
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++|+||++.|+. .+.+|+||||.|++||++-|+|||||||||||++|.+...+ ..|+|.++|+++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~p--t~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERP--TRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcC--CCceEEECCeecc
Confidence 689999988853 35699999999999999999999999999999999996554 4799999999864
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 895 Q------ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 895 ~------~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
. ..++|.+|+|+||-.+.++.||+||+.|...... ....+-+++|.++++.+||.+..+.+. ..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~lP-----~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARALP-----SQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcCc-----cccC
Confidence 3 2357899999999999999999999999876654 345566778999999999999887663 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-hccEeEEecCcEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLLKRGGQEI 1047 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~-fD~v~ll~~gG~~~ 1047 (1412)
|||+||++||||++.+|++|+.||||-+||+..+..||+++.++...|.||++.||+.+ +.+. --|++.|.+ |+++
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~--lv~~~~~rvl~l~~-Grl~ 216 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLE--LVNRMRHRVLALED-GRLV 216 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHH--HHHhccCcEEEEeC-CEEE
Confidence 99999999999999999999999999999999999999999999989999999999954 4444 467888885 8988
Q ss_pred EEcCC
Q 000576 1048 YVGPL 1052 (1412)
Q Consensus 1048 y~G~~ 1052 (1412)
.....
T Consensus 217 ~d~~~ 221 (223)
T COG2884 217 RDESR 221 (223)
T ss_pred ecccc
Confidence 76543
No 74
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-39 Score=350.95 Aligned_cols=216 Identities=28% Similarity=0.440 Sum_probs=191.8
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCc---
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGY--- 891 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~--- 891 (1412)
+.++++++..+ ...+++|||+.|+.||++||+|||||||||||++|+|..++ ..|.|.+||.
T Consensus 3 i~i~~~~~~~~-------------~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~ 67 (345)
T COG1118 3 IRINNVKKRFG-------------AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLF 67 (345)
T ss_pred eeehhhhhhcc-------------cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEecc
Confidence 56677776653 35689999999999999999999999999999999998775 4799999998
Q ss_pred cCCc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHH
Q 000576 892 PKKQ-ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTE 970 (1412)
Q Consensus 892 ~~~~-~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgG 970 (1412)
+.++ ....|.+|||+|+..+++++||.+|+.|+..++ ....+..+.+.+++++++.+.|+++.+... ..||||
T Consensus 68 D~~~~~~~~R~VGfvFQ~YALF~HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----~QLSGG 141 (345)
T COG1118 68 DVSNLAVRDRKVGFVFQHYALFPHMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRYP-----AQLSGG 141 (345)
T ss_pred chhccchhhcceeEEEechhhcccchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcCc-----hhcChH
Confidence 5544 334578999999999999999999999998777 344556778889999999999999988763 579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 971 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 971 qrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
|||||++||||+..|++|+||||.++||+.-+..+.+.|+++.++ |.|+|++|||+. +.++++|||++|++ |++.-.
T Consensus 142 QrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqv 219 (345)
T COG1118 142 QRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQV 219 (345)
T ss_pred HHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-Ceeeee
Confidence 999999999999999999999999999999999999999999876 999999999987 79999999999996 899999
Q ss_pred cCCC
Q 000576 1050 GPLG 1053 (1412)
Q Consensus 1050 G~~~ 1053 (1412)
||+.
T Consensus 220 g~p~ 223 (345)
T COG1118 220 GPPD 223 (345)
T ss_pred CCHH
Confidence 9973
No 75
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-38 Score=330.16 Aligned_cols=218 Identities=23% Similarity=0.309 Sum_probs=188.1
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCC---CCCeEEEEEEEc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRK---TTGYVTGNITIS 889 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~---~~~~~~G~i~i~ 889 (1412)
..++++||++.|. .+++|+|||+.|++++++|+||||||||||||++|-... ..-.++|+|.++
T Consensus 6 ~~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~ 72 (253)
T COG1117 6 PAIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLD 72 (253)
T ss_pred ceeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEEC
Confidence 3588999998885 457999999999999999999999999999999998732 223578999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchh-hhcccCCCC
Q 000576 890 GYPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLL-RQALVGLPG 963 (1412)
Q Consensus 890 g~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~ 963 (1412)
|.++-. ..+|+.+|.|+|.+.-+| +|++||+.|+.++....+ ++.++.|++.++...|++- +|.+-..
T Consensus 73 g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s-- 146 (253)
T COG1117 73 GKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS-- 146 (253)
T ss_pred CeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--
Confidence 987643 357889999999999999 999999999987765443 5677889999999988764 4554333
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
..+|||||+|||||||+|+-+|+||+||||||.|||.+...|-+++.++++ .-|||++||.+. ......|+...+..
T Consensus 147 a~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~-~yTIviVTHnmq-QAaRvSD~taFf~~- 223 (253)
T COG1117 147 ALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK-KYTIVIVTHNMQ-QAARVSDYTAFFYL- 223 (253)
T ss_pred ccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh-ccEEEEEeCCHH-HHHHHhHhhhhhcc-
Confidence 347999999999999999999999999999999999999999999999974 689999999986 46778999999986
Q ss_pred cEEEEEcCC
Q 000576 1044 GQEIYVGPL 1052 (1412)
Q Consensus 1044 G~~~y~G~~ 1052 (1412)
|+++.+|++
T Consensus 224 G~LvE~g~T 232 (253)
T COG1117 224 GELVEFGPT 232 (253)
T ss_pred cEEEEEcCH
Confidence 799999997
No 76
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.3e-38 Score=341.81 Aligned_cols=196 Identities=27% Similarity=0.421 Sum_probs=167.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-------cceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-------QRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 238 (1412)
.++|+|||++|++||+++|+|||||||||||++|.|...|+ +|+|.++|.++..... ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 57999999999999999999999999999999999999997 8999999998876543 2579999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++++||+||+.+.....+...+ +.....+.+++.+||.+..+
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~---- 136 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLL---- 136 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhc----
Confidence 9999999999987765543110 12234567899999986655
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
+..+..|||||||||+|||||+.+|++++.||||.+||+.++..|++.++++++. .++|+++++|+. ++...|||++.
T Consensus 137 ~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~-~g~tii~VTHd~-~lA~~~dr~i~ 214 (226)
T COG1136 137 KKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKE-RGKTIIMVTHDP-ELAKYADRVIE 214 (226)
T ss_pred cCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHh-cCCEEEEEcCCH-HHHHhCCEEEE
Confidence 1234479999999999999999999999999999999999999999999999764 466777677764 67789999999
Q ss_pred EeCCeE
Q 000576 399 ISDGQI 404 (1412)
Q Consensus 399 L~~G~i 404 (1412)
|.+|++
T Consensus 215 l~dG~~ 220 (226)
T COG1136 215 LKDGKI 220 (226)
T ss_pred EeCCee
Confidence 999994
No 77
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-38 Score=362.49 Aligned_cols=214 Identities=27% Similarity=0.394 Sum_probs=192.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++||+++|+ +.. +|+|+|++|+.||.++|+|||||||||||++|+|...+ .+|+|.|+|.++
T Consensus 3 ~i~l~~v~K~yg------------~~~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~--~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG------------SFE-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEP--TSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC------------Cce-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEC
Confidence 588999998884 112 89999999999999999999999999999999997664 489999999988
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 894 KQ-ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 894 ~~-~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
+. ...+|.+++|+|+..++|++||+||+.|+.+++. .++++.+++|+++.+.|++.+..|... +.||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhH
Confidence 76 3456889999999999999999999999987764 345677888999999999999998764 57999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcC
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGP 1051 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~ 1051 (1412)
|||+|||||+++|++++||||.|+||+..+..+...|+++.++ |.|+|.+|||.. +...++||+++|. +|++.-.|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998754 899999999975 7889999999999 589999998
Q ss_pred C
Q 000576 1052 L 1052 (1412)
Q Consensus 1052 ~ 1052 (1412)
+
T Consensus 218 p 218 (338)
T COG3839 218 P 218 (338)
T ss_pred h
Confidence 8
No 78
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.6e-38 Score=365.08 Aligned_cols=215 Identities=27% Similarity=0.411 Sum_probs=187.8
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++||+++++ .+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 6 ~~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p--~~G~v~i~G~~ 70 (306)
T PRK13537 6 APIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHP--DAGSISLCGEP 70 (306)
T ss_pred ceEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEe
Confidence 3689999999884 24699999999999999999999999999999999997654 47999999998
Q ss_pred CCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHH
Q 000576 893 KKQ--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTE 970 (1412)
Q Consensus 893 ~~~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgG 970 (1412)
... ...++.+||++|++.+++.+||+|++.|.+.++. ....+..+.++++++.+++.+..++.+ +.||||
T Consensus 71 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (306)
T PRK13537 71 VPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGG 142 (306)
T ss_pred cccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHH
Confidence 643 2346789999999999999999999998776542 233344556789999999988777665 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 971 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 971 qrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
||||++||+||+++|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 143 ~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g 220 (306)
T PRK13537 143 MKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEG 220 (306)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999987 68889999999985 8999999
Q ss_pred CC
Q 000576 1051 PL 1052 (1412)
Q Consensus 1051 ~~ 1052 (1412)
++
T Consensus 221 ~~ 222 (306)
T PRK13537 221 AP 222 (306)
T ss_pred CH
Confidence 86
No 79
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-38 Score=372.51 Aligned_cols=208 Identities=27% Similarity=0.398 Sum_probs=180.6
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 242 (1412)
+++.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|++.+++++
T Consensus 15 ~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~ 91 (356)
T PRK11650 15 GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHM 91 (356)
T ss_pred CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCC
Confidence 3456999999999999999999999999999999999999987 8999999998876544 37899999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
||+||+.|+.+..+.. ..+....++++++.+||++..|..+
T Consensus 92 tv~eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~----- 132 (356)
T PRK11650 92 SVRENMAYGLKIRGMP----------------------------------KAEIEERVAEAARILELEPLLDRKP----- 132 (356)
T ss_pred CHHHHHHhHHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhHhhCCh-----
Confidence 9999999986533210 0112234677899999988776554
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
+.|||||||||+|||||+.+|++|+||||||+||+.++..+.+.|+++.+. .+++++.++|+..++..++|+|++|++|
T Consensus 133 ~~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~-~g~tii~vTHd~~ea~~l~D~i~vl~~G 211 (356)
T PRK11650 133 RELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRR-LKTTSLYVTHDQVEAMTLADRVVVMNGG 211 (356)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 479999999999999999999999999999999999999999999998653 3677777999999999999999999999
Q ss_pred eEEEecChhhHH
Q 000576 403 QIVYQGPREHVL 414 (1412)
Q Consensus 403 ~iv~~G~~~~~~ 414 (1412)
+++..|+++++.
T Consensus 212 ~i~~~g~~~~~~ 223 (356)
T PRK11650 212 VAEQIGTPVEVY 223 (356)
T ss_pred EEEEECCHHHHH
Confidence 999999999874
No 80
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.4e-38 Score=397.31 Aligned_cols=258 Identities=27% Similarity=0.432 Sum_probs=204.4
Q ss_pred hHhhHHHHHHhhcCCCCCHHHHHHHHHHHHhhcCCCCCceeEEEeeeeEEEEEecCCCCCCCchhhHHHHHHHHHhhhhh
Q 000576 79 LQERQLLIDKLVKVPDVDNEKFLLKLKNRFDRVGISMPEIEVRFEHLKVEAEAYVGSRALPTFFNFCANIIEGLLNSLNI 158 (1412)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 158 (1412)
.++.+...+|+..+.+.++|.-..+. ....+....+++|+|+++.+..
T Consensus 436 ~q~~~~~~~rL~dil~~~~E~~~~~~-----~~~~~~~~g~I~~~nvsf~y~~--------------------------- 483 (709)
T COG2274 436 FQQAKVALERLGDILDTPPEQEGDKT-----LIHLPKLQGEIEFENVSFRYGP--------------------------- 483 (709)
T ss_pred HHHHHHHHHHHHHHhcCCcccccccc-----cccccccCceEEEEEEEEEeCC---------------------------
Confidence 45666667777777766665211110 1112222358999999998642
Q ss_pred cccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCC
Q 000576 159 LSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQH 235 (1412)
Q Consensus 159 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 235 (1412)
.+..+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||.++++..+ ++.++||+|+
T Consensus 484 -----~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~ 555 (709)
T COG2274 484 -----DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQD 555 (709)
T ss_pred -----CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEccc
Confidence 1225899999999999999999999999999999999999997 7999999999987765 5889999996
Q ss_pred CCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccc
Q 000576 236 DVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADT 315 (1412)
Q Consensus 236 d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 315 (1412)
+ ++++.||+||+.++. |+.+.++.++|+...+ ..|.+. .++..+||
T Consensus 556 ~-~Lf~gSI~eNi~l~~-------------------------p~~~~e~i~~A~~~ag-----~~~fI~---~lP~gy~t 601 (709)
T COG2274 556 P-FLFSGSIRENIALGN-------------------------PEATDEEIIEAAQLAG-----AHEFIE---NLPMGYDT 601 (709)
T ss_pred c-hhhcCcHHHHHhcCC-------------------------CCCCHHHHHHHHHHhC-----cHHHHH---hccccccc
Confidence 5 566789999999863 3344445555554333 234444 48999999
Q ss_pred cccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000576 316 MVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDD 395 (1412)
Q Consensus 316 ~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~ 395 (1412)
.||+.+. +||||||||++|||||+++|+||+||||||+||+.+...|.+.|.++.+ +.|+|.++|.. .+.+.||+
T Consensus 602 ~v~E~G~-~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~---~~T~I~IaHRl-~ti~~adr 676 (709)
T COG2274 602 PVGEGGA-NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ---GRTVIIIAHRL-STIRSADR 676 (709)
T ss_pred ccccCCC-CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc---CCeEEEEEccc-hHhhhccE
Confidence 9998766 7999999999999999999999999999999999999999999999753 45555466654 57788999
Q ss_pred EEEEeCCeEEEecChhhHHH
Q 000576 396 IILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 396 vivL~~G~iv~~G~~~~~~~ 415 (1412)
|+||++|+|+.+|+++|+++
T Consensus 677 IiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 677 IIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred EEEccCCceeccCCHHHHHH
Confidence 99999999999999999976
No 81
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4.9e-38 Score=371.20 Aligned_cols=209 Identities=23% Similarity=0.362 Sum_probs=181.5
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCce--eEEEECCccCCCcCc-cceEEEEcCCCCcCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLY--GRVTYNGHNMDEFVP-QRTAAYISQHDVHIG 240 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~--G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~ 240 (1412)
+++.+|+|+|++|++|++++|+|||||||||||++|+|+++|+ + |+|.++|+++....+ ++.++||+|+..+++
T Consensus 16 ~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p 92 (362)
T TIGR03258 16 GANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFP 92 (362)
T ss_pred CCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCC
Confidence 3456999999999999999999999999999999999999987 7 999999998865443 467999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000576 241 EMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 320 (1412)
Q Consensus 241 ~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 320 (1412)
++||+||+.|+.+..+... .+....++++++.+||++..|+.+
T Consensus 93 ~~tv~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~~~--- 135 (362)
T TIGR03258 93 HLKVEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAHLP--- 135 (362)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhCCh---
Confidence 9999999999865432100 012234677899999998777655
Q ss_pred ccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe
Q 000576 321 MIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS 400 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~ 400 (1412)
+.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|+
T Consensus 136 --~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~ 213 (362)
T TIGR03258 136 --AQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMK 213 (362)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 479999999999999999999999999999999999999999999998764336777889999999999999999999
Q ss_pred CCeEEEecChhhHH
Q 000576 401 DGQIVYQGPREHVL 414 (1412)
Q Consensus 401 ~G~iv~~G~~~~~~ 414 (1412)
+|+++..|+++++.
T Consensus 214 ~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 214 DGRLAAHGEPQALY 227 (362)
T ss_pred CCEEEEEcCHHHHH
Confidence 99999999999884
No 82
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-38 Score=369.61 Aligned_cols=208 Identities=24% Similarity=0.378 Sum_probs=180.8
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 242 (1412)
+++.+|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++....+ ++.++||+|+..+++++
T Consensus 17 ~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~ 93 (351)
T PRK11432 17 GSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHM 93 (351)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCC
Confidence 3456899999999999999999999999999999999999987 8999999998876544 37899999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
||+||+.|+.+.++... .+....++++++.+||.+..|.. +
T Consensus 94 tv~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r~-----~ 134 (351)
T PRK11432 94 SLGENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDRY-----V 134 (351)
T ss_pred CHHHHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----h
Confidence 99999999865432110 11223567789999998776544 4
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
+.|||||||||+|||||+.+|++|+|||||++||+.++.++.+.|+++.+. .+++++.++|+..++..++|+|++|++|
T Consensus 135 ~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~-~g~tii~vTHd~~e~~~laD~i~vm~~G 213 (351)
T PRK11432 135 DQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQ-FNITSLYVTHDQSEAFAVSDTVIVMNKG 213 (351)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHHhCCEEEEEECC
Confidence 579999999999999999999999999999999999999999999998653 3567777999999999999999999999
Q ss_pred eEEEecChhhHH
Q 000576 403 QIVYQGPREHVL 414 (1412)
Q Consensus 403 ~iv~~G~~~~~~ 414 (1412)
+++..|+++++.
T Consensus 214 ~i~~~g~~~~~~ 225 (351)
T PRK11432 214 KIMQIGSPQELY 225 (351)
T ss_pred EEEEEcCHHHHH
Confidence 999999999874
No 83
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=5.5e-38 Score=370.45 Aligned_cols=209 Identities=26% Similarity=0.410 Sum_probs=181.2
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 242 (1412)
+.+.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..+++++
T Consensus 15 ~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~ 91 (353)
T TIGR03265 15 GAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNL 91 (353)
T ss_pred CCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCC
Confidence 3456999999999999999999999999999999999999987 8999999998866544 47799999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
||+||+.|+.+.++.. ..+....++++++.+||++..|..+
T Consensus 92 tv~eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~l~L~~~~~~~~----- 132 (353)
T TIGR03265 92 TVADNIAYGLKNRGMG----------------------------------RAEVAERVAELLDLVGLPGSERKYP----- 132 (353)
T ss_pred cHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhCCh-----
Confidence 9999999986533210 0112234678999999998776554
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
+.|||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+. .+++++.++|+..++..++|+|++|++|
T Consensus 133 ~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~~~tvi~vTHd~~ea~~l~d~i~vl~~G 211 (353)
T TIGR03265 133 GQLSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRR-LGVTTIMVTHDQEEALSMADRIVVMNHG 211 (353)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHHhCCEEEEEECC
Confidence 479999999999999999999999999999999999999999999998654 3567777999999999999999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
+++..|+++++.+
T Consensus 212 ~i~~~g~~~~~~~ 224 (353)
T TIGR03265 212 VIEQVGTPQEIYR 224 (353)
T ss_pred EEEEEcCHHHHHh
Confidence 9999999998853
No 84
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-38 Score=362.40 Aligned_cols=217 Identities=26% Similarity=0.387 Sum_probs=193.6
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++||+++|+ ...+|+|||++|++||.++|+|||||||||||++|+|...+ .+|+|.++|.+
T Consensus 4 ~~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p--~~G~I~l~G~~ 68 (352)
T COG3842 4 PALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQP--SSGEILLDGED 68 (352)
T ss_pred ceEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEE
Confidence 3689999998884 35799999999999999999999999999999999998765 47999999999
Q ss_pred CCcc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHH
Q 000576 893 KKQE-TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQ 971 (1412)
Q Consensus 893 ~~~~-~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGq 971 (1412)
+... ..+|.+|+|+|+-.+||+|||+||+.|+.+++ ....+++.+++|+++++.++|.+..+... ..|||||
T Consensus 69 i~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQ 141 (352)
T COG3842 69 ITDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQ 141 (352)
T ss_pred CCCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHH
Confidence 7653 45788999999999999999999999997643 33445667789999999999999888764 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 972 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 972 rqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
||||+|||||+.+|++|+||||.|.||..-+..++..++++.++ |.|.|++|||.. +.+.+.|||.+|++ |++.-.|
T Consensus 142 qQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~g 219 (352)
T COG3842 142 QQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVG 219 (352)
T ss_pred HHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecC
Confidence 99999999999999999999999999999999999999998754 999999999986 78899999999985 8999999
Q ss_pred CCC
Q 000576 1051 PLG 1053 (1412)
Q Consensus 1051 ~~~ 1053 (1412)
++.
T Consensus 220 tP~ 222 (352)
T COG3842 220 TPE 222 (352)
T ss_pred CHH
Confidence 873
No 85
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.2e-37 Score=362.45 Aligned_cols=208 Identities=28% Similarity=0.416 Sum_probs=179.8
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC--ccceEEEEcCCCCcCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGE 241 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~ 241 (1412)
+++.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.
T Consensus 18 ~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~ 94 (306)
T PRK13537 18 GDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPD 94 (306)
T ss_pred CCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCC
Confidence 3456999999999999999999999999999999999999987 799999999875432 24679999999988999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
+||+||+.|.++..+... .+....++.+++.+||.+..++.++
T Consensus 95 ~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 137 (306)
T PRK13537 95 FTVRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVG--- 137 (306)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchh---
Confidence 999999998655432110 0112235678899999988887765
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
+|||||||||+||+||+++|++|+|||||+|||+.++..+.+.|+++.+ .+++|+.++|..+++.++||+|++|++
T Consensus 138 --~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~till~sH~l~e~~~~~d~i~il~~ 213 (306)
T PRK13537 138 --ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVIEE 213 (306)
T ss_pred --hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999854 367788899999999999999999999
Q ss_pred CeEEEecChhhHHH
Q 000576 402 GQIVYQGPREHVLE 415 (1412)
Q Consensus 402 G~iv~~G~~~~~~~ 415 (1412)
|++++.|+++++.+
T Consensus 214 G~i~~~g~~~~l~~ 227 (306)
T PRK13537 214 GRKIAEGAPHALIE 227 (306)
T ss_pred CEEEEECCHHHHHh
Confidence 99999999998864
No 86
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.6e-37 Score=363.76 Aligned_cols=206 Identities=24% Similarity=0.360 Sum_probs=178.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc------cceEEEEcCCCCcC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP------QRTAAYISQHDVHI 239 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 239 (1412)
+++|+|||++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999987 7999999998876432 45799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
+.+||+||+.|+.+..+... .+....+.++++.+||.+..|..+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~~-- 138 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSYP-- 138 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998754332100 012234567899999988776554
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
..|||||||||+|||||+.+|++|+|||||||||+.++..+.+.|+++.+.. +.+|+.++|+.+.+.++||+|++|
T Consensus 139 ---~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~-g~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 139 ---SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRL-GLTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4799999999999999999999999999999999999999999999987643 567777999999999999999999
Q ss_pred eCCeEEEecChhhHH
Q 000576 400 SDGQIVYQGPREHVL 414 (1412)
Q Consensus 400 ~~G~iv~~G~~~~~~ 414 (1412)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 87
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.6e-37 Score=368.09 Aligned_cols=219 Identities=27% Similarity=0.400 Sum_probs=185.5
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMT 243 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 243 (1412)
++++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++....+ ++.++||+|++.+++++|
T Consensus 26 ~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~lt 102 (375)
T PRK09452 26 GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMT 102 (375)
T ss_pred CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCC
Confidence 346899999999999999999999999999999999999987 7999999998866544 467999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccc
Q 000576 244 VRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIR 323 (1412)
Q Consensus 244 V~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 323 (1412)
|+||+.|+.+.++... .+....++++++.+||++..|..+ .
T Consensus 103 v~eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~p-----~ 143 (375)
T PRK09452 103 VFENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQRKP-----H 143 (375)
T ss_pred HHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-----h
Confidence 9999999865332100 011234577899999988776554 4
Q ss_pred cCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCe
Q 000576 324 GISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQ 403 (1412)
Q Consensus 324 ~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~ 403 (1412)
.|||||||||+|||||+.+|++|+||||+++||..++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|+
T Consensus 144 ~LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~ 222 (375)
T PRK09452 144 QLSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGR 222 (375)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 799999999999999999999999999999999999999999999987643 6677779999999999999999999999
Q ss_pred EEEecChhhHHHHHHhcCCCCCCCCChhHHH
Q 000576 404 IVYQGPREHVLEFFEFMGFKCPERKGVADFL 434 (1412)
Q Consensus 404 iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 434 (1412)
++..|+++++.+ .|....+++|+
T Consensus 223 i~~~g~~~~i~~--------~p~~~~~a~~~ 245 (375)
T PRK09452 223 IEQDGTPREIYE--------EPKNLFVARFI 245 (375)
T ss_pred EEEEcCHHHHHh--------CcccHHHHHhc
Confidence 999999998743 45544445544
No 88
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.2e-37 Score=364.37 Aligned_cols=211 Identities=21% Similarity=0.320 Sum_probs=182.2
Q ss_pred ccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-------cceEEEEcC
Q 000576 162 RKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-------QRTAAYISQ 234 (1412)
Q Consensus 162 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q 234 (1412)
+++.+.+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|
T Consensus 2 ~~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q 78 (363)
T TIGR01186 2 KTGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQ 78 (363)
T ss_pred ccCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEEC
Confidence 345677999999999999999999999999999999999999997 8999999999876543 467999999
Q ss_pred CCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccc
Q 000576 235 HDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCAD 314 (1412)
Q Consensus 235 ~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d 314 (1412)
++.+++++||+||+.|+.+..+... .+....++++++.+||++..+
T Consensus 79 ~~~l~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~ 124 (363)
T TIGR01186 79 QFALFPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEH 124 (363)
T ss_pred CCcCCCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhh
Confidence 9999999999999999865433210 011234567899999987766
Q ss_pred ccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000576 315 TMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFD 394 (1412)
Q Consensus 315 t~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D 394 (1412)
+.++ .|||||||||+|||||+.+|++|||||||+|||+.++..+.+.++++.+. .++||+.++|+..++.+++|
T Consensus 125 ~~p~-----~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~-~~~Tii~vTHd~~ea~~~~d 198 (363)
T TIGR01186 125 RYPD-----ELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQAT-LQKTIVFITHDLDEAIRIGD 198 (363)
T ss_pred CChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCC
Confidence 5544 69999999999999999999999999999999999999999999998653 35677779999999999999
Q ss_pred eEEEEeCCeEEEecChhhHHH
Q 000576 395 DIILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 395 ~vivL~~G~iv~~G~~~~~~~ 415 (1412)
+|++|++|+++..|+++++..
T Consensus 199 rI~vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 199 RIVIMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEEEEeCCEEEeeCCHHHHHh
Confidence 999999999999999998753
No 89
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-37 Score=344.12 Aligned_cols=207 Identities=26% Similarity=0.393 Sum_probs=181.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCC----CcCccceEEEEcCCC-CcCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMD----EFVPQRTAAYISQHD-VHIG 240 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 240 (1412)
..+|+|+|+.|++|+.++|+||||||||||+++|+|++.|+ +|+|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999997 799999999865 223468899999994 6678
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000576 241 EMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 320 (1412)
Q Consensus 241 ~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 320 (1412)
.-||.|.++|+.+..+... ++...+++.+++.+||.+.+|.
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~r----- 134 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLDR----- 134 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhccC-----
Confidence 8899999999987765421 1234567889999999988764
Q ss_pred ccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe
Q 000576 321 MIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS 400 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~ 400 (1412)
.+..|||||||||+||.+|+.+|++|+|||||||||+..+.++++.++++.. .++.++|.++|+.+.+.+++|++++|+
T Consensus 135 ~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~-~~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 135 PPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKE-EGGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred CccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 4557999999999999999999999999999999999999999999999975 346777779999999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 000576 401 DGQIVYQGPREHVLE 415 (1412)
Q Consensus 401 ~G~iv~~G~~~~~~~ 415 (1412)
+|+++++|+++++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999887754
No 90
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3e-37 Score=361.50 Aligned_cols=217 Identities=22% Similarity=0.298 Sum_probs=186.2
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++|+.+ ...+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p--~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 6899999888421 1124699999999999999999999999999999999997664 4799999998864
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 895 QE------TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 895 ~~------~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
.. ..++.+||++|+..+++..||+||+.|...... .+..+.++++.++++.++|.+..|... ..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDN---TPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 235679999999999999999999998765432 334455667899999999988777653 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI 1047 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~ 1047 (1412)
|||||||+|||||+.+|++|+||||||+||+.+...+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999865 999999999986 57788999999985 8999
Q ss_pred EEcCC
Q 000576 1048 YVGPL 1052 (1412)
Q Consensus 1048 y~G~~ 1052 (1412)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99986
No 91
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-37 Score=347.06 Aligned_cols=214 Identities=24% Similarity=0.353 Sum_probs=180.9
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 65 (235)
T cd03261 1 IELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDIS 65 (235)
T ss_pred CeEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 36788988874 24599999999999999999999999999999999997654 4799999998754
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 895 Q------ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 895 ~------~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
. ..+++.++|++|++.+++.+||+|++.+...... ....++.++.++++++.+++.+..+..+ ..||
T Consensus 66 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (235)
T cd03261 66 GLSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELS 138 (235)
T ss_pred ccChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCC
Confidence 3 2345679999999999999999999988643221 1233444566888999999987666543 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI 1047 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~ 1047 (1412)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 139 gG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~ 216 (235)
T cd03261 139 GGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIV 216 (235)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEE
Confidence 99999999999999999999999999999999999999999998764 899999999987 57788999999985 8999
Q ss_pred EEcCC
Q 000576 1048 YVGPL 1052 (1412)
Q Consensus 1048 y~G~~ 1052 (1412)
+.|+.
T Consensus 217 ~~g~~ 221 (235)
T cd03261 217 AEGTP 221 (235)
T ss_pred EecCH
Confidence 99875
No 92
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=6.2e-37 Score=359.73 Aligned_cols=215 Identities=27% Similarity=0.387 Sum_probs=186.9
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++||+++++ ++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEE
Confidence 4689999999884 24699999999999999999999999999999999997654 47999999988
Q ss_pred CCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHH
Q 000576 893 KKQ--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTE 970 (1412)
Q Consensus 893 ~~~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgG 970 (1412)
... ...++.+||++|+..+++.+||+|++.+.+.+.. ....+..+.++++++.++|.+..+..+ +.||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHH
Confidence 643 2345679999999999999999999987665442 223334456788999999988777665 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 971 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 971 qrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
||||++||++|+++|++|+|||||+|||+.++..+.+.|+++.+.|+|||+++|+++ ++.+.||++++|++ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999878999999999987 68889999999985 8999999
Q ss_pred CC
Q 000576 1051 PL 1052 (1412)
Q Consensus 1051 ~~ 1052 (1412)
++
T Consensus 255 ~~ 256 (340)
T PRK13536 255 RP 256 (340)
T ss_pred CH
Confidence 86
No 93
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.6e-37 Score=358.69 Aligned_cols=229 Identities=24% Similarity=0.379 Sum_probs=190.6
Q ss_pred cCCCCCceeEEEeeeeEEEEEecCCCCCCCchhhHHHHHHHHHhhhhhcccccccceeeeceeeEEeCCeEEEEEcCCCC
Q 000576 111 VGISMPEIEVRFEHLKVEAEAYVGSRALPTFFNFCANIIEGLLNSLNILSSRKKHITILKGVSGIIRPGRMTLLLGPPAS 190 (1412)
Q Consensus 111 ~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 190 (1412)
..+..+.-.|+|+|+++++. ++++||+++||+|++||.+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCC
Confidence 35566677899999999763 234599999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHH
Q 000576 191 GKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTEL 267 (1412)
Q Consensus 191 GKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~ 267 (1412)
||||+|++|.++++ . +|+|.+||.++.+... ++.+|||||+ .++++.||.+||.+|..- ..++.+.+.
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd-~~LFndTIl~NI~YGn~s----as~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQD-SVLFNDTILYNIKYGNPS----ASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCc-ccccchhHHHHhhcCCCC----cCHHHHHHH
Confidence 99999999999998 3 7999999999987655 5789999995 666678999999998532 233444444
Q ss_pred HHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChhhhhHHHHHHHHhCCCcEeE
Q 000576 268 ARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFF 347 (1412)
Q Consensus 268 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vll 347 (1412)
|++. ...|.+. .++++++|.||+++.. |||||||||++|||++.+|+|++
T Consensus 461 ~k~a--------------------------~~hd~i~---~l~~GY~T~VGerG~~-LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRA--------------------------GLHDVIS---RLPDGYQTLVGERGLM-LSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHc--------------------------CcHHHHH---hccccchhhHhhcccc-cccchHHHHHHHHHHhcCCCeEE
Confidence 4432 1233333 3899999999998874 99999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEEecChhhHHH
Q 000576 348 MDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 348 LDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G~~~~~~~ 415 (1412)
+|||||+||+.|..+|++.+.+. .+++|+|.+.|+.. ..+-||+|++|++|++...|++++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~---~~~rTvI~IvH~l~-ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDV---MSGRTVIMIVHRLD-LLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHh---cCCCeEEEEEecch-hHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999983 35667777888764 567789999999999999999999875
No 94
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.6e-37 Score=314.16 Aligned_cols=202 Identities=24% Similarity=0.373 Sum_probs=178.7
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc------cceEEEEcCCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP------QRTAAYISQHDV 237 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 237 (1412)
....+|+|||+.|++||++-|+||||||||||||+|.+...|+ .|+|.+||+++..... +|++|+|+|+..
T Consensus 13 ~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~r 89 (223)
T COG2884 13 GGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFR 89 (223)
T ss_pred CCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecc
Confidence 3456999999999999999999999999999999999999998 7999999999875532 588999999999
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
++++.||.||++|+.+..|... .+.+.++.++|+.+||.+.++..
T Consensus 90 LL~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~l- 134 (223)
T COG2884 90 LLPDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARAL- 134 (223)
T ss_pred ccccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhcC-
Confidence 9999999999999987765321 23445677899999999887644
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
+..|||||||||+||||++.+|++|+-||||-.||+.++.+|++.+.++.+ .||||++.+|+..-+..+--+++
T Consensus 135 ----P~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl 208 (223)
T COG2884 135 ----PSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVL 208 (223)
T ss_pred ----ccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEE
Confidence 447999999999999999999999999999999999999999999999854 58888889999999988888999
Q ss_pred EEeCCeEEEecC
Q 000576 398 LISDGQIVYQGP 409 (1412)
Q Consensus 398 vL~~G~iv~~G~ 409 (1412)
.|++|+++....
T Consensus 209 ~l~~Grl~~d~~ 220 (223)
T COG2884 209 ALEDGRLVRDES 220 (223)
T ss_pred EEeCCEEEeccc
Confidence 999999987643
No 95
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-37 Score=326.17 Aligned_cols=214 Identities=24% Similarity=0.396 Sum_probs=177.4
Q ss_pred hcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCcc----ceEEEEc
Q 000576 158 ILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQ----RTAAYIS 233 (1412)
Q Consensus 158 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~ 233 (1412)
++...+++.++|+|||+++++||+++|+||||+||||||++|+|..++. +|+|.++|++++...+. +-++|||
T Consensus 8 ~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VP 84 (237)
T COG0410 8 NLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVP 84 (237)
T ss_pred eEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCc
Confidence 4455677889999999999999999999999999999999999999986 79999999999887664 5689999
Q ss_pred CCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhC-CCcc
Q 000576 234 QHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILG-LDVC 312 (1412)
Q Consensus 234 Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lg-L~~~ 312 (1412)
|....|++|||+|||..++...... +.. .. ..|.+.+.|= |.+.
T Consensus 85 egR~iF~~LTVeENL~~g~~~~~~~-~~~----------------~~------------------~~e~v~~lFP~Lker 129 (237)
T COG0410 85 EGRRIFPRLTVEENLLLGAYARRDK-EAQ----------------ER------------------DLEEVYELFPRLKER 129 (237)
T ss_pred ccccchhhCcHHHHHhhhhhccccc-ccc----------------cc------------------cHHHHHHHChhHHHH
Confidence 9999999999999999886433210 000 00 0122222221 3333
Q ss_pred ccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000576 313 ADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDL 392 (1412)
Q Consensus 313 ~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~ 392 (1412)
.+..-| .|||||||.++|||||+++|++|+|||||.||-|.-..+|.+.++++.+. .+.+|+.+-|+...+.++
T Consensus 130 ~~~~aG-----~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~i 203 (237)
T COG0410 130 RNQRAG-----TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALEI 203 (237)
T ss_pred hcCccc-----CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHHh
Confidence 344434 69999999999999999999999999999999999999999999999753 457888899999999999
Q ss_pred cCeEEEEeCCeEEEecChhhHHH
Q 000576 393 FDDIILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 393 ~D~vivL~~G~iv~~G~~~~~~~ 415 (1412)
+||.++|.+|+|++.|+.+++.+
T Consensus 204 aDr~yvle~Griv~~G~~~eL~~ 226 (237)
T COG0410 204 ADRGYVLENGRIVLSGTAAELLA 226 (237)
T ss_pred hCEEEEEeCCEEEEecCHHHHhc
Confidence 99999999999999999999853
No 96
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.9e-37 Score=363.26 Aligned_cols=212 Identities=27% Similarity=0.404 Sum_probs=179.6
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 242 (1412)
+++++|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++....+ ++.++||+|++.+++++
T Consensus 13 ~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~ 89 (353)
T PRK10851 13 GRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHM 89 (353)
T ss_pred CCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCC
Confidence 3456999999999999999999999999999999999999987 7999999998865433 36799999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
||+||+.|+.+......+ .+ ..+....++.+++.+||++..|..+
T Consensus 90 tv~eni~~~~~~~~~~~~-------------------~~-----------~~~~~~~~~~~l~~~~L~~~~~~~~----- 134 (353)
T PRK10851 90 TVFDNIAFGLTVLPRRER-------------------PN-----------AAAIKAKVTQLLEMVQLAHLADRYP----- 134 (353)
T ss_pred cHHHHHHhhhhhcccccC-------------------CC-----------HHHHHHHHHHHHHHcCCchhhhCCh-----
Confidence 999999997643210000 00 0112234677899999987766554
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+.+++.++|+..++..++|+|++|++|
T Consensus 135 ~~LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~g~tii~vTHd~~ea~~~~Dri~vl~~G 213 (353)
T PRK10851 135 AQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEE-LKFTSVFVTHDQEEAMEVADRVVVMSQG 213 (353)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 579999999999999999999999999999999999999999999998653 3667777999999999999999999999
Q ss_pred eEEEecChhhHH
Q 000576 403 QIVYQGPREHVL 414 (1412)
Q Consensus 403 ~iv~~G~~~~~~ 414 (1412)
++++.|+++++.
T Consensus 214 ~i~~~g~~~~i~ 225 (353)
T PRK10851 214 NIEQAGTPDQVW 225 (353)
T ss_pred EEEEEcCHHHHH
Confidence 999999999884
No 97
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=332.29 Aligned_cols=229 Identities=27% Similarity=0.372 Sum_probs=194.6
Q ss_pred hhhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCcc----ceEEE
Q 000576 156 LNILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQ----RTAAY 231 (1412)
Q Consensus 156 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~y 231 (1412)
.+.++++++...+++|||+++++||+++|+||||||||||+|+|+|.+.|+ +|+|.++|++++...+. .-++-
T Consensus 7 v~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~R 83 (250)
T COG0411 7 VRGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIAR 83 (250)
T ss_pred eccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhcccee
Confidence 345678899999999999999999999999999999999999999999998 79999999999887764 35778
Q ss_pred EcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCc
Q 000576 232 ISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDV 311 (1412)
Q Consensus 232 v~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~ 311 (1412)
-+|+..+|++|||.||+..++..+.. +.......+. ..+..+.......+|+.+||.+
T Consensus 84 TFQ~~rlF~~lTVlENv~va~~~~~~---~~~~l~~~~~-------------------~~~e~~~~e~A~~~Le~vgL~~ 141 (250)
T COG0411 84 TFQITRLFPGLTVLENVAVGAHARLG---LSGLLGRPRA-------------------RKEEREARERARELLEFVGLGE 141 (250)
T ss_pred ecccccccCCCcHHHHHHHHhhhhhh---hhhhhccccc-------------------hhhHHHHHHHHHHHHHHcCCch
Confidence 89999999999999999998764421 0000000000 0011233445678999999999
Q ss_pred cccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 000576 312 CADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYD 391 (1412)
Q Consensus 312 ~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~ 391 (1412)
.+|+..| +||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.++++.+ ..+.+|+.+-|++.-+++
T Consensus 142 ~a~~~A~-----~LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~ 215 (250)
T COG0411 142 LADRPAG-----NLSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMG 215 (250)
T ss_pred hhcchhh-----cCChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhh
Confidence 9998887 4999999999999999999999999999999999999999999999865 356888889999999999
Q ss_pred hcCeEEEEeCCeEEEecChhhHHH
Q 000576 392 LFDDIILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 392 ~~D~vivL~~G~iv~~G~~~~~~~ 415 (1412)
+||||+||+.|+++.+|+++++.+
T Consensus 216 l~dri~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 216 LADRIVVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred hccEEEeccCCcCcccCCHHHHhc
Confidence 999999999999999999999863
No 98
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-37 Score=362.48 Aligned_cols=215 Identities=23% Similarity=0.336 Sum_probs=187.2
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ +.+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 3 ~l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p--~~G~I~~~g~~i 68 (356)
T PRK11650 3 GLKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERI--TSGEIWIGGRVV 68 (356)
T ss_pred EEEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 478999998872 124699999999999999999999999999999999997654 479999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 894 KQE-TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 894 ~~~-~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
... ..++.+|||+|+..++|++||+||+.|....+ ..+..+.++.++++++.++|.+..+..+ ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~ 140 (356)
T PRK11650 69 NELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQR 140 (356)
T ss_pred CCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHH
Confidence 432 23467999999999999999999999986543 2344555677899999999998877654 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcC
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGP 1051 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~ 1051 (1412)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++.+++|++++|++ |+++..|+
T Consensus 141 QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~ 218 (356)
T PRK11650 141 QRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGT 218 (356)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECC
Confidence 9999999999999999999999999999999999999998765 899999999986 68899999999985 89999998
Q ss_pred C
Q 000576 1052 L 1052 (1412)
Q Consensus 1052 ~ 1052 (1412)
+
T Consensus 219 ~ 219 (356)
T PRK11650 219 P 219 (356)
T ss_pred H
Confidence 6
No 99
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=5.8e-37 Score=361.78 Aligned_cols=214 Identities=25% Similarity=0.373 Sum_probs=188.0
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ .+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p--~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQ--TAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 488999998874 24589999999999999999999999999999999997654 479999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 894 KQ-ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 894 ~~-~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
.. ...+|.+|||+|+..++|++||+||+.|....+ ..+..+.++.++++++.++|.+..+... ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHH
Confidence 43 223577999999999999999999999986543 2334556678999999999998877653 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcC
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGP 1051 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~ 1051 (1412)
|||+|||||+.+|++|+|||||++||..++..+.+.|+++.++ |.|+|++||+++ ++..++|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999987 68899999999995 89999998
Q ss_pred C
Q 000576 1052 L 1052 (1412)
Q Consensus 1052 ~ 1052 (1412)
+
T Consensus 219 ~ 219 (353)
T TIGR03265 219 P 219 (353)
T ss_pred H
Confidence 7
No 100
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-37 Score=345.55 Aligned_cols=210 Identities=29% Similarity=0.379 Sum_probs=175.1
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC------ccceEEEEcCCC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV------PQRTAAYISQHD 236 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d 236 (1412)
++++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~ 86 (235)
T cd03261 10 FGGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSG 86 (235)
T ss_pred ECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCc
Confidence 34456999999999999999999999999999999999999987 799999998875432 235799999998
Q ss_pred CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccc
Q 000576 237 VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 316 (1412)
Q Consensus 237 ~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 316 (1412)
.+++.+||+||+.++.+...... ..+....++.+++.+||++..++.
T Consensus 87 ~~~~~~tv~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~ 133 (235)
T cd03261 87 ALFDSLTVFENVAFPLREHTRLS---------------------------------EEEIREIVLEKLEAVGLRGAEDLY 133 (235)
T ss_pred ccCCCCcHHHHHHHHHhhccCCC---------------------------------HHHHHHHHHHHHHHcCCchhhcCC
Confidence 88899999999998643210000 001122356688999998766655
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
+ ..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.+++|+|
T Consensus 134 ~-----~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~vsH~~~~~~~~~d~v 207 (235)
T cd03261 134 P-----AELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKE-LGLTSIMVTHDLDTAFAIADRI 207 (235)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhcCEE
Confidence 5 469999999999999999999999999999999999999999999998653 3567777899999999999999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000576 397 ILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~ 414 (1412)
++|++|++++.|+++++.
T Consensus 208 ~~l~~G~i~~~g~~~~~~ 225 (235)
T cd03261 208 AVLYDGKIVAEGTPEELR 225 (235)
T ss_pred EEEECCeEEEecCHHHHc
Confidence 999999999999987763
No 101
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.5e-37 Score=311.21 Aligned_cols=201 Identities=24% Similarity=0.396 Sum_probs=174.9
Q ss_pred ceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCCCCHHHHHH
Q 000576 171 GVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTVRETLA 249 (1412)
Q Consensus 171 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~e~l~ 249 (1412)
..++.|++||++||+||||||||||||+|+|+..|. +|+|.+||.+.+...| +|-+++++|+..+|.++||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 467899999999999999999999999999999997 8999999999877655 478999999999999999999999
Q ss_pred HhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChhh
Q 000576 250 FSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGGQ 329 (1412)
Q Consensus 250 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGGq 329 (1412)
++..- +-+ +. .+..+.++.++..+||..+.+...+ .|||||
T Consensus 94 LGl~P---~Lk------L~-------------------------a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGq 134 (231)
T COG3840 94 LGLSP---GLK------LN-------------------------AEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQ 134 (231)
T ss_pred ccCCc---ccc------cC-------------------------HHHHHHHHHHHHHhChhhHhhhCcc-----ccCchH
Confidence 87431 111 00 1123456778999999988876655 699999
Q ss_pred hhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEEecC
Q 000576 330 RKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVYQGP 409 (1412)
Q Consensus 330 kqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G~ 409 (1412)
||||++||+|+.+.+||+||||+|+||+.-+.+....+.+++.+ ++.|+++++|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E-~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDE-RKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHh-hCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 99999999999999999999999999999999999999999875 46667778999999999999999999999999999
Q ss_pred hhhHH
Q 000576 410 REHVL 414 (1412)
Q Consensus 410 ~~~~~ 414 (1412)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 88764
No 102
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8e-38 Score=319.84 Aligned_cols=217 Identities=25% Similarity=0.372 Sum_probs=190.4
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.+..+|+.++|. ++++++|||+.+++||++|++|||||||||.+.++.|...+ .+|+|.+||.++
T Consensus 4 ~L~a~~l~K~y~-------------kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~di 68 (243)
T COG1137 4 TLVAENLAKSYK-------------KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDI 68 (243)
T ss_pred EEEehhhhHhhC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCccc
Confidence 577888887773 46799999999999999999999999999999999997665 479999999988
Q ss_pred Ccccc----cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQETF----ARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~~~~----~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
+.... +.-+||.||+...|..+||+||+.-....+.. +....+++...+++++.+++.++++... ..|||
T Consensus 69 T~lPm~~RArlGigYLpQE~SIFr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSG 142 (243)
T COG1137 69 TKLPMHKRARLGIGYLPQEASIFRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSG 142 (243)
T ss_pred ccCChHHHhhcCcccccccchHhhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----ccccc
Confidence 75332 23589999999999999999999877666542 2233566677899999999999998763 36999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
|||||+.|||||+.+|+.++||||.+|+||-+...|+++++.+.+.|.-|++|-|.-. +....|||.+++.+ |+++..
T Consensus 143 GERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~ 220 (243)
T COG1137 143 GERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAE 220 (243)
T ss_pred chHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEec
Confidence 9999999999999999999999999999999999999999999999999999999987 78999999999996 899999
Q ss_pred cCCC
Q 000576 1050 GPLG 1053 (1412)
Q Consensus 1050 G~~~ 1053 (1412)
|.+.
T Consensus 221 G~p~ 224 (243)
T COG1137 221 GSPE 224 (243)
T ss_pred CCHH
Confidence 9873
No 103
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.8e-36 Score=359.75 Aligned_cols=215 Identities=26% Similarity=0.431 Sum_probs=181.2
Q ss_pred CceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCc
Q 000576 812 PHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGY 891 (1412)
Q Consensus 812 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~ 891 (1412)
...++|+||++.|+..+ +..+|+|+||+|+|||.+||+||||+||||+.++|-....+ .+|+|.+||+
T Consensus 463 ~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~P--tsG~IllDG~ 530 (716)
T KOG0058|consen 463 QGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDP--TSGRILLDGV 530 (716)
T ss_pred cceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCC--CCCeEEECCe
Confidence 34799999999998542 45799999999999999999999999999999999986654 5899999999
Q ss_pred cCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHH-----HHHHHHHHHHHcCCchhhhcccCCCC
Q 000576 892 PKKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKT-----RKMFIEEVMELVELNLLRQALVGLPG 963 (1412)
Q Consensus 892 ~~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~-----~~~~v~~~l~~l~l~~~~~~~vg~~~ 963 (1412)
|+++ ..+++.+|+|.|+|.++. -||+||+.|+.. +.++++ +.+.+.+.+. ++.+-.|+.+|..|
T Consensus 531 ~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI~--~~p~gY~T~VGEkG 602 (716)
T KOG0058|consen 531 PISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFIT--NFPDGYNTVVGEKG 602 (716)
T ss_pred ehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHH--hCccccccccCCcc
Confidence 9765 457789999999999986 499999998753 233322 2222333344 34445788999876
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
. .||||||||++|||||++||+||+|||+||.||+++...|+++|.++.+ ++|||+++|+.| ..+.+|+|+++++
T Consensus 603 ~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~- 677 (716)
T KOG0058|consen 603 S-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK- 677 (716)
T ss_pred c-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC-
Confidence 5 6999999999999999999999999999999999999999999998875 699999999986 5788999999986
Q ss_pred cEEEEEcC
Q 000576 1044 GQEIYVGP 1051 (1412)
Q Consensus 1044 G~~~y~G~ 1051 (1412)
|+++..|.
T Consensus 678 G~V~E~G~ 685 (716)
T KOG0058|consen 678 GRVVEMGT 685 (716)
T ss_pred CeEEeccc
Confidence 89999995
No 104
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-37 Score=359.53 Aligned_cols=214 Identities=23% Similarity=0.385 Sum_probs=188.2
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++ .+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.+||.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKP--TEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 589999998874 24589999999999999999999999999999999997664 479999999886
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 894 KQE-TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 894 ~~~-~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
... ..+|.+|||+|+..++|++||+||+.|....+. ....+.+++++++++.+++.+..+... ..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 542 234679999999999999999999999865432 344556678999999999988776653 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcC
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGP 1051 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~ 1051 (1412)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||+++ ++.+++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999987 68899999999995 89999998
Q ss_pred C
Q 000576 1052 L 1052 (1412)
Q Consensus 1052 ~ 1052 (1412)
+
T Consensus 221 ~ 221 (351)
T PRK11432 221 P 221 (351)
T ss_pred H
Confidence 7
No 105
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-37 Score=328.34 Aligned_cols=205 Identities=28% Similarity=0.341 Sum_probs=176.9
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC----ccceEEEEcCCC--CcCC
Q 000576 167 TILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV----PQRTAAYISQHD--VHIG 240 (1412)
Q Consensus 167 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d--~~~~ 240 (1412)
++|+|||++|.+||..+|+|+||||||||.++|+|..+|+ +|+|+++|.+..... ..+.+-+|+||+ .+-|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 5999999999999999999999999999999999999997 799999998775542 346789999986 6678
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000576 241 EMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 320 (1412)
Q Consensus 241 ~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 320 (1412)
..||++.|.-+.+..+.. +.+..+.++|+.+||+.. +-++
T Consensus 98 ~~tv~~~l~Epl~~~~~~------------------------------------~~~~~i~~~L~~VgL~~~----~l~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLS------------------------------------KSQQRIAELLDQVGLPPS----FLDR 137 (252)
T ss_pred chhHHHHHhhhhccCCcc------------------------------------HHHHHHHHHHHHcCCCHH----HHhc
Confidence 899999998665443221 111225678999999854 3356
Q ss_pred ccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe
Q 000576 321 MIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS 400 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~ 400 (1412)
.+..||||||||++|||||..+|++|++|||||+||+..+.+|++.|.++.+. .+.+.+.++|+..-+..+||||+||+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~-~~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKE-RGLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHh-cCceEEEEeCcHHHHHHHhhheeeee
Confidence 67789999999999999999999999999999999999999999999998764 56788889999999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 000576 401 DGQIVYQGPREHVLE 415 (1412)
Q Consensus 401 ~G~iv~~G~~~~~~~ 415 (1412)
+|++++.++.+++..
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999999864
No 106
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-37 Score=363.66 Aligned_cols=207 Identities=24% Similarity=0.344 Sum_probs=179.4
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMT 243 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 243 (1412)
+..+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.+|||+|+..+++++|
T Consensus 31 ~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~lt 107 (377)
T PRK11607 31 GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMT 107 (377)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCC
Confidence 346999999999999999999999999999999999999987 7999999998865443 478999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccc
Q 000576 244 VRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIR 323 (1412)
Q Consensus 244 V~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 323 (1412)
|+||+.|+.+..+.. ..+....++++++.+||.+..|.. +.
T Consensus 108 v~eNi~~~l~~~~~~----------------------------------~~~~~~~v~~~l~~l~L~~~~~~~-----~~ 148 (377)
T PRK11607 108 VEQNIAFGLKQDKLP----------------------------------KAEIASRVNEMLGLVHMQEFAKRK-----PH 148 (377)
T ss_pred HHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhcCC-----hh
Confidence 999999986533210 001223467789999998766654 45
Q ss_pred cCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCe
Q 000576 324 GISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQ 403 (1412)
Q Consensus 324 ~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~ 403 (1412)
+|||||||||+|||||+.+|++|||||||++||..++..+.+.|+++.+.. +.+++.++|+..++..++|+|++|++|+
T Consensus 149 ~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~ 227 (377)
T PRK11607 149 QLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGK 227 (377)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCE
Confidence 799999999999999999999999999999999999999999999886644 5677779999999999999999999999
Q ss_pred EEEecChhhHH
Q 000576 404 IVYQGPREHVL 414 (1412)
Q Consensus 404 iv~~G~~~~~~ 414 (1412)
++..|+++++.
T Consensus 228 i~~~g~~~~~~ 238 (377)
T PRK11607 228 FVQIGEPEEIY 238 (377)
T ss_pred EEEEcCHHHHH
Confidence 99999999874
No 107
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.5e-37 Score=352.94 Aligned_cols=205 Identities=20% Similarity=0.206 Sum_probs=152.3
Q ss_pred CCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcC
Q 000576 811 EPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISG 890 (1412)
Q Consensus 811 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 890 (1412)
.|..+.+.+|++.|+.. .-+++.+++..+..-...+++|+||+||||+++++.|...+ ..|.+.+++
T Consensus 359 ~~p~l~i~~V~f~y~p~-----------~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~--~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTPS-----------EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTP--TRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCCc-----------chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCc--ccceeeecc
Confidence 45578999999887521 12588899999999999999999999999999999985543 357666654
Q ss_pred ccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHH
Q 000576 891 YPKKQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTE 970 (1412)
Q Consensus 891 ~~~~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgG 970 (1412)
+..++|-.|...-+-.+.|.+ +.+-...+. ...+ +.+++-+..+||..-. .-. .+.+||||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~-vd~~~~~~p--G~~~----ee~r~hl~~~Gl~g~l---a~~-si~~LSGG 486 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNA-VDFMEKSFP--GKTE----EEIRRHLGSFGLSGEL---ALQ-SIASLSGG 486 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHH-HHHHHHhCC--CCCH----HHHHHHHHhcCCCchh---hhc-cccccCCc
Confidence 456789888765544555543 333333321 2222 2356677788886422 111 25689999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 971 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 971 qrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
||-||++|.....+|.+|+|||||+.||..+-..+-+.|++. +..||+++|+-+ -+-..|+++.+.++|.-.-..|
T Consensus 487 QKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~-fi~~~c~E~Wvve~g~vt~ieg 562 (582)
T KOG0062|consen 487 QKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEE-FISSLCKELWVVEDGKVTPIEG 562 (582)
T ss_pred chhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHH-HHhhcCceeEEEcCCcEEeeec
Confidence 999999999999999999999999999999999999999875 457999999976 3777899999998643333444
Q ss_pred C
Q 000576 1051 P 1051 (1412)
Q Consensus 1051 ~ 1051 (1412)
.
T Consensus 563 ~ 563 (582)
T KOG0062|consen 563 G 563 (582)
T ss_pred c
Confidence 3
No 108
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=9.6e-37 Score=360.24 Aligned_cols=214 Identities=23% Similarity=0.330 Sum_probs=187.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEE--EEEEEcCc
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVT--GNITISGY 891 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~--G~i~i~g~ 891 (1412)
.++++|++++++ .+.+|+|+|++|++||+++|+|||||||||||++|+|...+ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 588999999884 23599999999999999999999999999999999997654 36 99999998
Q ss_pred cCCc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHH
Q 000576 892 PKKQ-ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTE 970 (1412)
Q Consensus 892 ~~~~-~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgG 970 (1412)
+... ...++.+|||+|+..++|.+||+||+.|....+ .....+.+++++++++.++|.+..+..+ ..||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 7643 223567999999999999999999999986543 2344555667899999999998877664 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 971 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 971 qrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++..++|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999875 799999999987 68889999999985 89999
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
.|++
T Consensus 220 ~g~~ 223 (362)
T TIGR03258 220 HGEP 223 (362)
T ss_pred EcCH
Confidence 9986
No 109
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-37 Score=363.79 Aligned_cols=208 Identities=25% Similarity=0.415 Sum_probs=178.4
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 242 (1412)
+++.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|+..+++++
T Consensus 14 ~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~ 90 (369)
T PRK11000 14 GDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHL 90 (369)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCC
Confidence 3456999999999999999999999999999999999999987 7999999998865433 36799999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
||+||+.|+.+..+... .+....++.+++.+||++..|+.+
T Consensus 91 tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~lgL~~~~~~~~----- 131 (369)
T PRK11000 91 SVAENMSFGLKLAGAKK----------------------------------EEINQRVNQVAEVLQLAHLLDRKP----- 131 (369)
T ss_pred CHHHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCCh-----
Confidence 99999999764322100 011234567899999987776555
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
..|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++++.++|+..++..++|+|++|++|
T Consensus 132 ~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tvI~vTHd~~~~~~~~d~i~vl~~G 210 (369)
T PRK11000 132 KALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKR-LGRTMIYVTHDQVEAMTLADKIVVLDAG 210 (369)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-hCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 479999999999999999999999999999999999999999999998653 3567777999999999999999999999
Q ss_pred eEEEecChhhHH
Q 000576 403 QIVYQGPREHVL 414 (1412)
Q Consensus 403 ~iv~~G~~~~~~ 414 (1412)
+++..|+++++.
T Consensus 211 ~i~~~g~~~~i~ 222 (369)
T PRK11000 211 RVAQVGKPLELY 222 (369)
T ss_pred EEEEEcCHHHHH
Confidence 999999998874
No 110
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=337.41 Aligned_cols=211 Identities=27% Similarity=0.404 Sum_probs=177.4
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 1 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 65 (213)
T cd03259 1 LELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERP--DSGEILIDGRDVT 65 (213)
T ss_pred CeeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEcC
Confidence 35788888774 24699999999999999999999999999999999997654 4799999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 895 QE-TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 895 ~~-~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
.. ..++.++|++|++.+++.+|++|++.+...... ......++.++++++.+++.+..+..+ ..|||||||
T Consensus 66 ~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~q 137 (213)
T cd03259 66 GVPPERRNIGMVFQDYALFPHLTVAENIAFGLKLRG---VPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQ 137 (213)
T ss_pred cCchhhccEEEEcCchhhccCCcHHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHH
Confidence 32 234578999999988899999999987654321 223344456788999999987766553 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
|++|||+|+.+|++|+|||||+|||+.++..+++.|+++++ .|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 138 rl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 138 RVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999876 4899999999986 57788999999986 7887765
No 111
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=9.3e-37 Score=355.33 Aligned_cols=208 Identities=28% Similarity=0.403 Sum_probs=178.7
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC--ccceEEEEcCCCCcCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGE 241 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~ 241 (1412)
+++++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 4 ~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 80 (302)
T TIGR01188 4 GDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDED 80 (302)
T ss_pred CCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCC
Confidence 4567999999999999999999999999999999999999987 799999998875421 23579999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
+||+||+.+.++..+... .+....++.+++.+||++..++.++
T Consensus 81 ~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 123 (302)
T TIGR01188 81 LTGRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVG--- 123 (302)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchh---
Confidence 999999998765432100 0112235678999999887776654
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.++||+|++|++
T Consensus 124 --~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~g~tvi~~sH~~~~~~~~~d~v~~l~~ 199 (302)
T TIGR01188 124 --TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE--EGVTILLTTHYMEEADKLCDRIAIIDH 199 (302)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999864 367777799999999999999999999
Q ss_pred CeEEEecChhhHHH
Q 000576 402 GQIVYQGPREHVLE 415 (1412)
Q Consensus 402 G~iv~~G~~~~~~~ 415 (1412)
|++++.|+++++.+
T Consensus 200 G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 200 GRIIAEGTPEELKR 213 (302)
T ss_pred CEEEEECCHHHHHH
Confidence 99999999988754
No 112
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1e-36 Score=357.94 Aligned_cols=211 Identities=27% Similarity=0.392 Sum_probs=180.0
Q ss_pred cccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC--ccceEEEEcCCCCc
Q 000576 161 SRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV--PQRTAAYISQHDVH 238 (1412)
Q Consensus 161 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~ 238 (1412)
++++++.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+||++|++.+
T Consensus 49 k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~ 125 (340)
T PRK13536 49 KSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNL 125 (340)
T ss_pred EEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccC
Confidence 3344567999999999999999999999999999999999999987 799999999875432 24679999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++.+||+||+.|.....+... .+.....+.+++.+||++..++.++
T Consensus 126 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~~ 171 (340)
T PRK13536 126 DLEFTVRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADARVS 171 (340)
T ss_pred CCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCCChh
Confidence 899999999987554332100 0111234567889999988877765
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
+|||||||||+||+||+++|++|+|||||+|||+.++.++.+.|+++.. .+++|+.++|+.+++.++||+|++
T Consensus 172 -----~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~--~g~tilisSH~l~e~~~~~d~i~i 244 (340)
T PRK13536 172 -----DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCV 244 (340)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEE
Confidence 6999999999999999999999999999999999999999999999864 367777799999999999999999
Q ss_pred EeCCeEEEecChhhHHH
Q 000576 399 ISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~~ 415 (1412)
|++|+++++|+++++.+
T Consensus 245 l~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 245 LEAGRKIAEGRPHALID 261 (340)
T ss_pred EECCEEEEEcCHHHHHh
Confidence 99999999999998864
No 113
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.1e-37 Score=318.97 Aligned_cols=216 Identities=21% Similarity=0.359 Sum_probs=187.3
Q ss_pred hcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCcc----ceEEEEc
Q 000576 158 ILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQ----RTAAYIS 233 (1412)
Q Consensus 158 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~ 233 (1412)
++.++++++++++|||+.+++||+++++|||||||||...++.|+..|+ +|+|.++|.+++..... .-+||+|
T Consensus 9 ~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLp 85 (243)
T COG1137 9 NLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLP 85 (243)
T ss_pred hhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCccccc
Confidence 4567788899999999999999999999999999999999999999998 89999999999887653 3589999
Q ss_pred CCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccc
Q 000576 234 QHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCA 313 (1412)
Q Consensus 234 Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 313 (1412)
|++..|-.+||+|||.-..+.+.... ...+.+...+.+|+.|+|.|++
T Consensus 86 QE~SIFr~LtV~dNi~~vlE~~~~d~--------------------------------~~~~~~~~l~~LL~ef~i~hlr 133 (243)
T COG1137 86 QEASIFRKLTVEDNIMAVLEIREKDL--------------------------------KKAERKEELDALLEEFHITHLR 133 (243)
T ss_pred ccchHhhcCcHHHHHHHHHhhhhcch--------------------------------hHHHHHHHHHHHHHHhchHHHh
Confidence 99999999999999987665432100 0012233467899999999988
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000576 314 DTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLF 393 (1412)
Q Consensus 314 dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~ 393 (1412)
|..-. .||||||+|+.|||||+.+|+.++||||++|+||-+..+|.+.++.+.+ ++.-|+..-|+..|+...+
T Consensus 134 ~~~a~-----sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~ 206 (243)
T COG1137 134 DSKAY-----SLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDIC 206 (243)
T ss_pred cCccc-----ccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhh
Confidence 86533 6999999999999999999999999999999999999999999999865 4666666789999999999
Q ss_pred CeEEEEeCCeEEEecChhhHHH
Q 000576 394 DDIILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 394 D~vivL~~G~iv~~G~~~~~~~ 415 (1412)
||.+++++|++..+|+++++.+
T Consensus 207 dRaYIi~~G~vla~G~p~ei~~ 228 (243)
T COG1137 207 DRAYIISDGKVLAEGSPEEIVN 228 (243)
T ss_pred heEEEEecCeEEecCCHHHHhc
Confidence 9999999999999999999864
No 114
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.4e-36 Score=337.74 Aligned_cols=208 Identities=24% Similarity=0.334 Sum_probs=175.3
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKP--TRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEehh
Confidence 678999988741 123599999999999999999999999999999999997654 4799999998753
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 895 QE------TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 895 ~~------~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
.. .+++.++|++|++.+++.+||+||+.+....+. ....+.++.++++++.+++.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 245679999999999999999999988754332 223334556889999999987766553 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+.+.+|++++|++ |+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999999999999999999999999999777999999999986 57778999999986 55
No 115
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=357.68 Aligned_cols=217 Identities=25% Similarity=0.387 Sum_probs=186.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ .+.+|+|+|++|++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 2 ~L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i 66 (353)
T PRK10851 2 SIEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDV 66 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEC
Confidence 378899998874 24699999999999999999999999999999999997654 479999999886
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHH
Q 000576 894 KQE-TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLS-PEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQ 971 (1412)
Q Consensus 894 ~~~-~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGq 971 (1412)
... ..++.+|||+|+..++|.+||+||+.|....+.. ...+.++.++.++++++.++|.+..+..+ ..|||||
T Consensus 67 ~~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq 141 (353)
T PRK10851 67 SRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQ 141 (353)
T ss_pred CCCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHH
Confidence 432 2346799999999999999999999987654211 12334455667899999999988777654 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 972 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 972 rqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||++. ++.+++|++++|++ |++++.|
T Consensus 142 ~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g 219 (353)
T PRK10851 142 KQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAG 219 (353)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 99999999999999999999999999999999999999998765 899999999987 68899999999985 8999999
Q ss_pred CC
Q 000576 1051 PL 1052 (1412)
Q Consensus 1051 ~~ 1052 (1412)
++
T Consensus 220 ~~ 221 (353)
T PRK10851 220 TP 221 (353)
T ss_pred CH
Confidence 86
No 116
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-36 Score=334.33 Aligned_cols=210 Identities=26% Similarity=0.441 Sum_probs=178.1
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 65 (210)
T cd03269 1 LEVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILP--DSGEVLFDGKPLD 65 (210)
T ss_pred CEEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCCchh
Confidence 35788888773 24599999999999999999999999999999999997554 4799999998764
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHH
Q 000576 895 QETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKR 974 (1412)
Q Consensus 895 ~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqR 974 (1412)
. ..++.++|++|+..+++.+|++|++.+....+. ....+.++.++++++.+++.+..+..+ ..||||||||
T Consensus 66 ~-~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 136 (210)
T cd03269 66 I-AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQK 136 (210)
T ss_pred H-HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHH
Confidence 3 345678999999999999999999988654432 223334556888999999987666543 4799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 975 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 975 l~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 137 l~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 137 VQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999998877899999999986 57788999999985 7887754
No 117
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.5e-36 Score=351.85 Aligned_cols=214 Identities=28% Similarity=0.392 Sum_probs=183.3
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ .+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478999998874 24699999999999999999999999999999999997654 479999999875
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHH
Q 000576 894 KQ--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQ 971 (1412)
Q Consensus 894 ~~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGq 971 (1412)
.. ...++.+||++|++.+++.+||+|++.+.+.... ....+.++.++++++.+++.+..+..+ ..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 42 2245679999999999999999999987554331 223333456788999999987776654 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcC
Q 000576 972 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGP 1051 (1412)
Q Consensus 972 rqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~ 1051 (1412)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999987 67789999999985 89999998
Q ss_pred C
Q 000576 1052 L 1052 (1412)
Q Consensus 1052 ~ 1052 (1412)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 118
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-36 Score=335.37 Aligned_cols=216 Identities=26% Similarity=0.369 Sum_probs=180.4
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 69 (220)
T cd03293 1 LEVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERP--TSGEVLVDGEPVT 69 (220)
T ss_pred CeEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECc
Confidence 3578888877411 0114699999999999999999999999999999999997654 4799999998764
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHH
Q 000576 895 QETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKR 974 (1412)
Q Consensus 895 ~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqR 974 (1412)
. .++.++|++|++.+++.+|++|++.+....+. .......+.++++++.+++.+..+..+ ..||||||||
T Consensus 70 ~--~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 139 (220)
T cd03293 70 G--PGPDRGYVFQQDALLPWLTVLDNVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQR 139 (220)
T ss_pred c--ccCcEEEEecccccccCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHH
Confidence 2 35678999999988889999999988754432 223334566889999999987666553 4799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEec-CcEEEEEcCC
Q 000576 975 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKR-GGQEIYVGPL 1052 (1412)
Q Consensus 975 l~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~-gG~~~y~G~~ 1052 (1412)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ .|+++..++.
T Consensus 140 l~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 140 VALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999999999864 4899999999986 57788999999985 4899988765
No 119
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=3e-36 Score=357.28 Aligned_cols=214 Identities=21% Similarity=0.335 Sum_probs=187.1
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ .+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETP--DSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 589999999874 24589999999999999999999999999999999997664 479999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 894 KQ-ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 894 ~~-~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
.. ...++.+||++|+..++|++||+||+.|+...+ ..+..+.++.++++++.+++.+..+..+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 43 223567999999999999999999999976433 2334455667899999999998877654 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcC
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGP 1051 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~ 1051 (1412)
|||+|||+|+.+|++|+|||||+|||..++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 999999999986 68899999999985 89999998
Q ss_pred C
Q 000576 1052 L 1052 (1412)
Q Consensus 1052 ~ 1052 (1412)
+
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 6
No 120
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-36 Score=335.26 Aligned_cols=213 Identities=28% Similarity=0.373 Sum_probs=180.5
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++ ++.+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 65 (220)
T cd03265 1 IEVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKP--TSGRATVAGHDVV 65 (220)
T ss_pred CEEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecC
Confidence 46788888774 24699999999999999999999999999999999997554 4799999998653
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 895 Q--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 895 ~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
. ...++.++|++|+..+++.+||+|++.+....+. ....+.++.++++++.+++.+..+..+ ..||||||
T Consensus 66 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 137 (220)
T cd03265 66 REPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMR 137 (220)
T ss_pred cChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHH
Confidence 2 2334578999999999999999999988754432 223334456889999999987766554 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcC
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGP 1051 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~ 1051 (1412)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+
T Consensus 138 qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 215 (220)
T cd03265 138 RRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGT 215 (220)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 9999999999999999999999999999999999999999876 899999999987 57788999999985 89998887
Q ss_pred C
Q 000576 1052 L 1052 (1412)
Q Consensus 1052 ~ 1052 (1412)
.
T Consensus 216 ~ 216 (220)
T cd03265 216 P 216 (220)
T ss_pred h
Confidence 4
No 121
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-36 Score=322.77 Aligned_cols=217 Identities=25% Similarity=0.334 Sum_probs=179.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.|+... ....+|+|||++|.+||++||+|+||||||||.++|+|...+ .+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCccc
Confidence 478999998886321 122699999999999999999999999999999999997654 489999999875
Q ss_pred Ccc----cccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh-hcccCCCCCCC
Q 000576 894 KQE----TFARISGYCEQNDI--HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR-QALVGLPGVNG 966 (1412)
Q Consensus 894 ~~~----~~~~~~~yv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-~~~vg~~~~~~ 966 (1412)
... .+.+.+-+|+||+. +.|..||++.|.=.... ...++. .+++.++++.+||.+-. +.. ...
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~--~~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKS--QQRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHH--HHHHHHHHHHcCCCHHHHhcC-----chh
Confidence 542 46778999999985 67999999988544322 122222 23389999999997632 322 347
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 967 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 967 lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
||||||||+||||||+.+|++|++|||||.||+..++.|++.|.++.++ |.|.|+++||.+ -+..+|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999764 789999999987 47788999999996 89
Q ss_pred EEEEcCCC
Q 000576 1046 EIYVGPLG 1053 (1412)
Q Consensus 1046 ~~y~G~~~ 1053 (1412)
++..+|.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999973
No 122
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.8e-36 Score=333.41 Aligned_cols=211 Identities=26% Similarity=0.395 Sum_probs=178.0
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++ .+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~v~~~g~~~~ 65 (213)
T cd03301 1 VELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEP--TSGRIYIGGRDVT 65 (213)
T ss_pred CEEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 36788988774 23599999999999999999999999999999999997654 4799999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 895 QE-TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 895 ~~-~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
.. ..++.++|++|++.+++..|++||+.+....+. ....+.++.++++++.+++.+..+..+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (213)
T cd03301 66 DLPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRK---VPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQ 137 (213)
T ss_pred cCCcccceEEEEecChhhccCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHH
Confidence 32 223579999999988889999999987654321 223344556888999999987766554 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
|++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 r~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 138 RVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999999764 899999999986 57788999999985 7888876
No 123
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=9.6e-37 Score=307.00 Aligned_cols=211 Identities=27% Similarity=0.350 Sum_probs=179.5
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
+..++|+++|..-+ =..+..|.+||++||+||||||||||||+++|...+ .+|.|.|||.+..
T Consensus 2 l~L~~V~~~y~~~~---------------~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t 64 (231)
T COG3840 2 LALDDVRFSYGHLP---------------MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHT 64 (231)
T ss_pred ccccceEEeeCcce---------------EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecC
Confidence 34677777775321 136789999999999999999999999999998775 4899999999865
Q ss_pred c-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 895 Q-ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 895 ~-~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
. ....|-++.++|+..++.++||.+|+-++..-. ... .++.+++++.++..+||.++.+.+.+ .|||||||
T Consensus 65 ~~~P~~RPVSmlFQEnNLFaHLtV~qNigLGl~P~--LkL-~a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGqRQ 136 (231)
T COG3840 65 ASPPAERPVSMLFQENNLFAHLTVAQNIGLGLSPG--LKL-NAEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQRQ 136 (231)
T ss_pred cCCcccCChhhhhhccccchhhhhhhhhcccCCcc--ccc-CHHHHHHHHHHHHHhChhhHhhhCcc-----ccCchHHH
Confidence 4 345677899999999999999999997653211 112 23455679999999999999887754 69999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|+++||+|+++-+||+||||.|.||+.-+..+...+.++.+ ++.|++++||+|+ |.....|+++++++ ||+.+.|+.
T Consensus 137 RvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 137 RVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 99999999999999999999999999999999999999875 5899999999998 78999999999996 899999986
No 124
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.9e-35 Score=368.38 Aligned_cols=218 Identities=28% Similarity=0.438 Sum_probs=178.3
Q ss_pred ccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEE
Q 000576 807 VLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNI 886 (1412)
Q Consensus 807 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i 886 (1412)
..+.-+..++|+||+|+|+. +...+|+|+|++|+|||.+||+|+||||||||+|+|+|...+ .+|+|
T Consensus 464 ~~~~~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p--~~G~I 530 (709)
T COG2274 464 HLPKLQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKP--QQGRI 530 (709)
T ss_pred cccccCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceE
Confidence 34444568999999999963 223699999999999999999999999999999999998765 48999
Q ss_pred EEcCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch-------hhh
Q 000576 887 TISGYPKKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL-------LRQ 956 (1412)
Q Consensus 887 ~i~g~~~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~ 956 (1412)
.+||++.++ ..+++.+|||+|++.++. -|++||+.+.. ++.+.++ +.++++.-+..+ -.+
T Consensus 531 ~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e~----i~~A~~~ag~~~fI~~lP~gy~ 600 (709)
T COG2274 531 LLDGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDEE----IIEAAQLAGAHEFIENLPMGYD 600 (709)
T ss_pred EECCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHHH----HHHHHHHhCcHHHHHhcccccc
Confidence 999998654 567899999999888765 59999997642 2333222 333333333322 234
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhcc
Q 000576 957 ALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 1036 (1412)
Q Consensus 957 ~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~ 1036 (1412)
+.+|.. +.+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|.+.. .|+|+|+++|+++ .+..+|+
T Consensus 601 t~v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adr 676 (709)
T COG2274 601 TPVGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADR 676 (709)
T ss_pred cccccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccE
Confidence 555544 45899999999999999999999999999999999999999999999986 4799999999986 6889999
Q ss_pred EeEEecCcEEEEEcCC
Q 000576 1037 LFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1037 v~ll~~gG~~~y~G~~ 1052 (1412)
+++|++ |+++..|+.
T Consensus 677 IiVl~~-Gkiv~~gs~ 691 (709)
T COG2274 677 IIVLDQ-GKIVEQGSH 691 (709)
T ss_pred EEEccC-CceeccCCH
Confidence 999985 899999985
No 125
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-36 Score=335.31 Aligned_cols=204 Identities=27% Similarity=0.423 Sum_probs=169.9
Q ss_pred ccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCC
Q 000576 162 RKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIG 240 (1412)
Q Consensus 162 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~ 240 (1412)
+++++++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++
T Consensus 9 ~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~ 85 (213)
T cd03259 9 TYGSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFP 85 (213)
T ss_pred EeCCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhcc
Confidence 334457999999999999999999999999999999999999887 7999999998754322 357999999988888
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000576 241 EMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 320 (1412)
Q Consensus 241 ~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 320 (1412)
.+||+||+.++....+... .+....++.+++.+||++..++.++
T Consensus 86 ~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 129 (213)
T cd03259 86 HLTVAENIAFGLKLRGVPK----------------------------------AEIRARVRELLELVGLEGLLNRYPH-- 129 (213)
T ss_pred CCcHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhcChh--
Confidence 9999999988643221000 0011234567889999876665554
Q ss_pred ccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe
Q 000576 321 MIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS 400 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~ 400 (1412)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.+++|++++|+
T Consensus 130 ---~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~ 205 (213)
T cd03259 130 ---ELSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRE-LGITTIYVTHDQEEALALADRIAVMN 205 (213)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhcCEEEEEE
Confidence 69999999999999999999999999999999999999999999998653 35677778999999999999999999
Q ss_pred CCeEEEec
Q 000576 401 DGQIVYQG 408 (1412)
Q Consensus 401 ~G~iv~~G 408 (1412)
+|++++.|
T Consensus 206 ~G~i~~~g 213 (213)
T cd03259 206 EGRIVQVG 213 (213)
T ss_pred CCEEEecC
Confidence 99998765
No 126
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=313.05 Aligned_cols=209 Identities=29% Similarity=0.460 Sum_probs=176.7
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCcc---ceEEEEcCCCCcCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQ---RTAAYISQHDVHIG 240 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~ 240 (1412)
..+.+|++||++++|||+++|+||||||||||||+|+|++.|+ +|++.+||++++.+.+. +.-|..+|+..+-+
T Consensus 12 ~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laF 88 (259)
T COG4559 12 AGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAF 88 (259)
T ss_pred ecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCccccc
Confidence 3456999999999999999999999999999999999999997 79999999999887664 56789999988888
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000576 241 EMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 320 (1412)
Q Consensus 241 ~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 320 (1412)
..||+|-+.++..-.+.+.. | .+...+.+..|...++.+.+. +
T Consensus 89 pFtv~eVV~mGr~p~~~g~~-----------------~---------------~e~~~i~~~ala~~d~~~la~-----R 131 (259)
T COG4559 89 PFTVQEVVQMGRIPHRSGRE-----------------P---------------EEDERIAAQALAATDLSGLAG-----R 131 (259)
T ss_pred ceEHHHHHHhcccccccCCC-----------------c---------------hhhHHHHHHHHHHcChhhhhc-----c
Confidence 88999999998654321110 0 122334566777778877664 3
Q ss_pred ccccCChhhhhHHHHHHHHhC------CCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000576 321 MIRGISGGQRKRVTTGEMLVG------PAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFD 394 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~------~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D 394 (1412)
..+.|||||||||.+||.|+. ++++||||||||+||...+..+++..+++++. +..|+.++|+..-+..++|
T Consensus 132 ~y~~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~--g~~V~~VLHDLNLAA~YaD 209 (259)
T COG4559 132 DYRTLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE--GGAVLAVLHDLNLAAQYAD 209 (259)
T ss_pred chhhcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc--CCcEEEEEccchHHHHhhh
Confidence 455799999999999999974 45699999999999999999999999999984 3556668999999999999
Q ss_pred eEEEEeCCeEEEecChhhHH
Q 000576 395 DIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 395 ~vivL~~G~iv~~G~~~~~~ 414 (1412)
+|++|.+||++..|++++++
T Consensus 210 rivll~~Grv~a~g~p~~vl 229 (259)
T COG4559 210 RIVLLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeeeeCCeEeecCCHHHhc
Confidence 99999999999999999986
No 127
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.7e-36 Score=351.45 Aligned_cols=201 Identities=27% Similarity=0.377 Sum_probs=175.7
Q ss_pred eeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCCCH
Q 000576 840 LVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQ--ETFARISGYCEQNDIHSPQVTV 917 (1412)
Q Consensus 840 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~yv~Q~~~~~~~lTv 917 (1412)
+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+||
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 83 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRP--TSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTG 83 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcH
Confidence 4699999999999999999999999999999999997654 47999999987643 2345679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000576 918 YESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 997 (1412)
Q Consensus 918 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgL 997 (1412)
+|++.+.+.++. ....+.++.++++++.+++.+..+..+ +.||||||||++||+||+.+|++|+|||||+||
T Consensus 84 ~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gL 155 (302)
T TIGR01188 84 RENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGL 155 (302)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 999998766542 223344556889999999988777654 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 998 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 998 D~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 156 D~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 156 DPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999877999999999987 67889999999985 899999985
No 128
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-36 Score=335.83 Aligned_cols=209 Identities=30% Similarity=0.399 Sum_probs=174.7
Q ss_pred ccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC--ccceEEEEcCCCCcC
Q 000576 162 RKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV--PQRTAAYISQHDVHI 239 (1412)
Q Consensus 162 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~ 239 (1412)
+++++++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 9 ~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~ 85 (220)
T cd03265 9 KYGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVD 85 (220)
T ss_pred EECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCcccc
Confidence 344557999999999999999999999999999999999999887 799999998764321 135799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
+.+||+||+.+..+..+... .+....++.+++.+||++..++.++
T Consensus 86 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 130 (220)
T cd03265 86 DELTGWENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLVK- 130 (220)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCChh-
Confidence 89999999998654322100 0112235678999999876666554
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.+++|++++|
T Consensus 131 ----~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~~tH~~~~~~~~~d~i~~l 205 (220)
T cd03265 131 ----TYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEE-FGMTILLTTHYMEEAEQLCDRVAII 205 (220)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 69999999999999999999999999999999999999999999998653 2567777999999999999999999
Q ss_pred eCCeEEEecChhhH
Q 000576 400 SDGQIVYQGPREHV 413 (1412)
Q Consensus 400 ~~G~iv~~G~~~~~ 413 (1412)
++|+++..|+++++
T Consensus 206 ~~G~i~~~~~~~~~ 219 (220)
T cd03265 206 DHGRIIAEGTPEEL 219 (220)
T ss_pred eCCEEEEeCChHHc
Confidence 99999999987653
No 129
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=5.6e-36 Score=334.99 Aligned_cols=221 Identities=37% Similarity=0.611 Sum_probs=181.2
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC-CeEEEEEEEcCccC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT-GYVTGNITISGYPK 893 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~-~~~~G~i~i~g~~~ 893 (1412)
+.|+|+++.++.. +..+.+|+|+|+++++||+++|+||||||||||+++|+|.... ++.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 5688999887421 0135799999999999999999999999999999999997541 12579999999877
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHH-HHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 894 KQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEE-VMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 894 ~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~-~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
.....++.++|++|++.+++.+||+||+.|..................+++ .++.+++.+..+.. .+.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 544556779999999999999999999998765443222122222334555 88888887766544 357999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+.|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998777899999999985468899999999985 8998765
No 130
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-36 Score=355.27 Aligned_cols=215 Identities=23% Similarity=0.363 Sum_probs=187.1
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++|+++.++ ...+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+
T Consensus 18 ~~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~ 82 (377)
T PRK11607 18 PLLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQP--TAGQIMLDGVD 82 (377)
T ss_pred ceEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEE
Confidence 3589999998874 24689999999999999999999999999999999997664 47999999987
Q ss_pred CCc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHH
Q 000576 893 KKQ-ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQ 971 (1412)
Q Consensus 893 ~~~-~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGq 971 (1412)
+.. ...+|.+|||+|+..++|++||.||+.|....+ .....+.+++++++++.+++.+..+..+ ..|||||
T Consensus 83 i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq 154 (377)
T PRK11607 83 LSHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQ 154 (377)
T ss_pred CCCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHH
Confidence 643 234578999999999999999999999876543 2234555667899999999988777653 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 972 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 972 rqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
||||+|||||+.+|++|+|||||++||..++..+.+.|+++.+ .|.|+|++||++. ++..++|++++|++ |+++..|
T Consensus 155 ~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g 232 (377)
T PRK11607 155 RQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIG 232 (377)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEc
Confidence 9999999999999999999999999999999999999999865 4899999999987 68899999999985 8999999
Q ss_pred CC
Q 000576 1051 PL 1052 (1412)
Q Consensus 1051 ~~ 1052 (1412)
++
T Consensus 233 ~~ 234 (377)
T PRK11607 233 EP 234 (377)
T ss_pred CH
Confidence 86
No 131
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-36 Score=354.13 Aligned_cols=217 Identities=22% Similarity=0.300 Sum_probs=184.1
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++|+.. ...+.+|+|+|++|++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p--~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERP--TSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 6789999888411 1135699999999999999999999999999999999997654 4799999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 895 QE------TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 895 ~~------~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
.. ..++.+||++|+..+++.+||+||+.+....+. ....+.++.++++++.+++.+..+..+ ..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 235679999999999999999999998754432 233444567889999999987766543 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI 1047 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~ 1047 (1412)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 899999999987 57788999999985 8999
Q ss_pred EEcCC
Q 000576 1048 YVGPL 1052 (1412)
Q Consensus 1048 y~G~~ 1052 (1412)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99986
No 132
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.9e-36 Score=337.98 Aligned_cols=216 Identities=28% Similarity=0.378 Sum_probs=179.9
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 65 (236)
T cd03219 1 LEVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRP--TSGSVLFDGEDIT 65 (236)
T ss_pred CeeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEECC
Confidence 35788888773 23599999999999999999999999999999999997654 4799999998764
Q ss_pred cc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCC-------CCHHHHHHHHHHHHHHcCCchhhhcccCCCC
Q 000576 895 QE---T-FARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPE-------VDSKTRKMFIEEVMELVELNLLRQALVGLPG 963 (1412)
Q Consensus 895 ~~---~-~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~-------~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~ 963 (1412)
.. . .++.++|++|++.+++.+||+|++.+......... ....+.++.++++++.+++.+..+..+
T Consensus 66 ~~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (236)
T cd03219 66 GLPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA---- 141 (236)
T ss_pred CCCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh----
Confidence 32 1 23458999999999999999999988754332110 012334456889999999987665543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|+++ ++.+.+|++++|++
T Consensus 142 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~- 218 (236)
T cd03219 142 -GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ- 218 (236)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-
Confidence 479999999999999999999999999999999999999999999999877999999999987 57788999999985
Q ss_pred cEEEEEcCC
Q 000576 1044 GQEIYVGPL 1052 (1412)
Q Consensus 1044 G~~~y~G~~ 1052 (1412)
|++++.|+.
T Consensus 219 G~i~~~~~~ 227 (236)
T cd03219 219 GRVIAEGTP 227 (236)
T ss_pred CEEEeecCH
Confidence 899998875
No 133
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=355.23 Aligned_cols=207 Identities=26% Similarity=0.369 Sum_probs=177.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc------cceEEEEcCCCCc
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP------QRTAAYISQHDVH 238 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~ 238 (1412)
.+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 17 ~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l 93 (343)
T PRK11153 17 TIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNL 93 (343)
T ss_pred ceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCcc
Confidence 356999999999999999999999999999999999999987 7999999998765432 3579999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++.+||+||+.++.+..+... .+....++.+++.+||++..++.+
T Consensus 94 ~~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~- 138 (343)
T PRK11153 94 LSSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADRYP- 138 (343)
T ss_pred CCCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 899999999998754332100 011123567899999987766554
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.++||+|++
T Consensus 139 ----~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiilvtH~~~~i~~~~d~v~~ 213 (343)
T PRK11153 139 ----AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRE-LGLTIVLITHEMDVVKRICDRVAV 213 (343)
T ss_pred ----hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEE
Confidence 469999999999999999999999999999999999999999999998653 356777799999999999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000576 399 ISDGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~ 414 (1412)
|++|++++.|+.+++.
T Consensus 214 l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 214 IDAGRLVEQGTVSEVF 229 (343)
T ss_pred EECCEEEEEcCHHHHH
Confidence 9999999999998874
No 134
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=4.8e-36 Score=333.91 Aligned_cols=215 Identities=28% Similarity=0.416 Sum_probs=180.2
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++.. .....+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEP--DAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEEcc
Confidence 5789999887421 0112699999999999999999999999999999999997654 4799999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 895 Q--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 895 ~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
. ..+++.++|++|++.+++.+||+||+.+....+. ....+..+.++++++.+++.+..+..+ ..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 3 2345679999999988999999999987654431 223444567889999999987766553 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999777999999999986 57788999999986 7887654
No 135
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-37 Score=348.18 Aligned_cols=250 Identities=21% Similarity=0.378 Sum_probs=201.7
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHhhcCCCCCceeEEEeeeeEEEEEecCCCCCCCchhhHHHHHHHHHhhhhhccccccc
Q 000576 86 IDKLVKVPDVDNEKFLLKLKNRFDRVGISMPEIEVRFEHLKVEAEAYVGSRALPTFFNFCANIIEGLLNSLNILSSRKKH 165 (1412)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1412)
+|+++.+.++++| +.+.........++..|.|+|+++.++ ++
T Consensus 509 mEnmfdllkee~e-----Vvd~P~a~pl~~~~G~i~fsnvtF~Y~---------------------------------p~ 550 (790)
T KOG0056|consen 509 MENMFDLLKEEPE-----VVDLPGAPPLKVTQGKIEFSNVTFAYD---------------------------------PG 550 (790)
T ss_pred HHHHHHHhhcCch-----hhcCCCCCCccccCCeEEEEEeEEecC---------------------------------CC
Confidence 6777777777666 444444444555678899999999764 35
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC---ccceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV---PQRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 242 (1412)
+++|+||||++.||+.+|++||+|+||||++++|..+.+-+ +|.|+++|++++... .++.+|.|||+ ..+++.
T Consensus 551 k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQD-tvLFNd 626 (790)
T KOG0056|consen 551 KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQD-TVLFND 626 (790)
T ss_pred CceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCc-ceeecc
Confidence 67999999999999999999999999999999999999876 899999999986543 35789999996 445567
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|+..||.|+. |+...|+..+|+ ++..+.|. +++++++++|+||+++.
T Consensus 627 TI~yNIryak-------------------------~~AsneevyaAA-----kAA~IHdr---Il~fPegY~t~VGERGL 673 (790)
T KOG0056|consen 627 TILYNIRYAK-------------------------PSASNEEVYAAA-----KAAQIHDR---ILQFPEGYNTRVGERGL 673 (790)
T ss_pred eeeeheeecC-------------------------CCCChHHHHHHH-----HHhhHHHH---HhcCchhhhhhhhhccc
Confidence 9999999863 233223332222 22334454 56799999999999999
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
+ |||||||||+|||+++..|.+++|||.||+||..+.++|..+|.+++. ++|+|+ +.|..+.+ --+|.|+++++|
T Consensus 674 k-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIV-vAHRLSTi-vnAD~ILvi~~G 748 (790)
T KOG0056|consen 674 K-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIV-VAHRLSTI-VNADLILVISNG 748 (790)
T ss_pred c-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEE-Eeeeehhe-ecccEEEEEeCC
Confidence 6 999999999999999999999999999999999999999999999986 456666 44555443 457999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
+|++.|.++|++.
T Consensus 749 ~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 749 RIVERGRHEELLK 761 (790)
T ss_pred eEeecCcHHHHHh
Confidence 9999999999975
No 136
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=5e-36 Score=337.01 Aligned_cols=213 Identities=26% Similarity=0.375 Sum_probs=180.0
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 65 (232)
T cd03218 1 LRAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKP--DSGKILLDGQDIT 65 (232)
T ss_pred CeEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecc
Confidence 36788888774 24699999999999999999999999999999999997654 4799999998754
Q ss_pred cc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHH
Q 000576 895 QE---T-FARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTE 970 (1412)
Q Consensus 895 ~~---~-~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgG 970 (1412)
.. . .++.++|++|++.+++.+||+|++.+....+. ....+..+.++++++.+++.+..+..+ ..||||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 137 (232)
T cd03218 66 KLPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGG 137 (232)
T ss_pred cCCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHH
Confidence 31 1 23468999999999999999999987643322 223334456788999999987666543 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 971 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 971 qrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 138 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 215 (232)
T cd03218 138 ERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEG 215 (232)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEe
Confidence 999999999999999999999999999999999999999999877999999999987 68889999999985 8999988
Q ss_pred CC
Q 000576 1051 PL 1052 (1412)
Q Consensus 1051 ~~ 1052 (1412)
+.
T Consensus 216 ~~ 217 (232)
T cd03218 216 TP 217 (232)
T ss_pred CH
Confidence 75
No 137
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-36 Score=336.98 Aligned_cols=217 Identities=26% Similarity=0.406 Sum_probs=181.1
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.|+ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 66 (239)
T cd03296 2 SIEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERP--DSGTILFGGEDA 66 (239)
T ss_pred EEEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 378999998874 24699999999999999999999999999999999997654 479999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHH
Q 000576 894 KQE-TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSP-EVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQ 971 (1412)
Q Consensus 894 ~~~-~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGq 971 (1412)
... ..++.++|++|++.+++.+||+|++.+....+... .....+..+.++++++.+++.+..+..+ ..|||||
T Consensus 67 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 141 (239)
T cd03296 67 TDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQ 141 (239)
T ss_pred CcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHH
Confidence 432 22456899999998888999999998865432110 0122233456788999999987666543 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 972 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 972 rqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 142 ~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 219 (239)
T cd03296 142 RQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVG 219 (239)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEec
Confidence 99999999999999999999999999999999999999999765 899999999986 57788999999985 8999998
Q ss_pred CC
Q 000576 1051 PL 1052 (1412)
Q Consensus 1051 ~~ 1052 (1412)
+.
T Consensus 220 ~~ 221 (239)
T cd03296 220 TP 221 (239)
T ss_pred CH
Confidence 75
No 138
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-36 Score=333.87 Aligned_cols=215 Identities=24% Similarity=0.339 Sum_probs=187.9
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.+.++|++|+|+. +..+|+|+|+.|++||.++|+|+||||||||+++|+|...+ .+|.|.++|.+.
T Consensus 3 ~i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~ 68 (235)
T COG1122 3 MIEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDT 68 (235)
T ss_pred eEEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeec
Confidence 4689999999851 25799999999999999999999999999999999997664 369999999985
Q ss_pred C----cccccceEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 894 K----QETFARISGYCEQNDIH-SPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 894 ~----~~~~~~~~~yv~Q~~~~-~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
. ...+++.+|||+|++.. +..-||.|.+.|+..-. ..+.++.+++++++++.+++.+.++.. ...||
T Consensus 69 ~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LS 140 (235)
T COG1122 69 SSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRP-----PFNLS 140 (235)
T ss_pred cchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCC-----ccccC
Confidence 5 34577889999999753 55779999999986432 345556788999999999999987765 34799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI 1047 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~ 1047 (1412)
|||||||+||.+|+.+|++|+|||||||||+.+...+++.++++.++ |.|||+++|+.. .+.+.+|++++|++ |+++
T Consensus 141 GGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~ 218 (235)
T COG1122 141 GGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKIL 218 (235)
T ss_pred CcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEe
Confidence 99999999999999999999999999999999999999999999877 789999999987 58888999999996 8999
Q ss_pred EEcCC
Q 000576 1048 YVGPL 1052 (1412)
Q Consensus 1048 y~G~~ 1052 (1412)
+.|++
T Consensus 219 ~~g~p 223 (235)
T COG1122 219 ADGDP 223 (235)
T ss_pred ecCCH
Confidence 99986
No 139
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.5e-36 Score=350.65 Aligned_cols=208 Identities=27% Similarity=0.399 Sum_probs=176.0
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC--ccceEEEEcCCCCcCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGE 241 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~ 241 (1412)
+++++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 15 ~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (303)
T TIGR01288 15 GDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPE 91 (303)
T ss_pred CCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcC
Confidence 3456999999999999999999999999999999999999887 799999998864322 24679999999888889
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
+||+||+.+..+..+... .+....++.+++.+||++..++.++
T Consensus 92 ~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~l~~~~~~~~~--- 134 (303)
T TIGR01288 92 FTVRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADVRVA--- 134 (303)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCchh---
Confidence 999999987543221100 0011234567889999887777665
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+++|+.++|+.+++.++||++++|++
T Consensus 135 --~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~g~til~~sH~~~~~~~~~d~i~~l~~ 210 (303)
T TIGR01288 135 --LLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVLES 210 (303)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999864 366777799999999999999999999
Q ss_pred CeEEEecChhhHHH
Q 000576 402 GQIVYQGPREHVLE 415 (1412)
Q Consensus 402 G~iv~~G~~~~~~~ 415 (1412)
|++++.|+++++.+
T Consensus 211 G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 211 GRKIAEGRPHALID 224 (303)
T ss_pred CEEEEEcCHHHHHh
Confidence 99999999988754
No 140
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.7e-36 Score=383.29 Aligned_cols=207 Identities=27% Similarity=0.415 Sum_probs=168.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 242 (1412)
+++|+|+|++|+||+.++|+||||||||||+++|+|++ |+ +|+|.+||+++++... ++.++||+|++. +++.
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~-LF~~ 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQ-LPHG 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCc-CCCc
Confidence 46999999999999999999999999999999999999 76 7999999999887654 478999999765 5567
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
||+|||.++.. +.+.+++.+++...+ ..+.+ -.|+++.||.||+++.
T Consensus 438 TI~eNI~~g~~-------------------------~~~~eei~~al~~a~-----l~~~i---~~lp~G~dT~vge~G~ 484 (588)
T PRK11174 438 TLRDNVLLGNP-------------------------DASDEQLQQALENAW-----VSEFL---PLLPQGLDTPIGDQAA 484 (588)
T ss_pred CHHHHhhcCCC-------------------------CCCHHHHHHHHHHhC-----HHHHH---HhcccccccccccCCC
Confidence 99999998631 111222222221111 11222 2378888999998865
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
+||||||||++|||||+++|+||+||||||+||+.++..|.+.|+++. +++|++.++|.. +..+.+|+|++|++|
T Consensus 485 -~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~---~~~TvIiItHrl-~~i~~aD~Iivl~~G 559 (588)
T PRK11174 485 -GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS---RRQTTLMVTHQL-EDLAQWDQIWVMQDG 559 (588)
T ss_pred -CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh---CCCEEEEEecCh-HHHHhCCEEEEEeCC
Confidence 699999999999999999999999999999999999999999998864 345556577776 455779999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
+++++|+++++.+
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999999864
No 141
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.9e-36 Score=331.26 Aligned_cols=207 Identities=30% Similarity=0.411 Sum_probs=175.9
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 65 (208)
T cd03268 1 LKTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKP--DSGEITFDGKSYQ 65 (208)
T ss_pred CEEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCCccc
Confidence 36788888773 24699999999999999999999999999999999997654 4899999998764
Q ss_pred c-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 895 Q-ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 895 ~-~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
. ...++.++|++|++.+++.+||+||+.+....+. . .++.++++++.+++.+..+..+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 133 (208)
T cd03268 66 KNIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQ 133 (208)
T ss_pred chHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHH
Confidence 3 2335678999999988999999999987654321 1 1345788999999987766553 469999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
|++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+.|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 134 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 134 RLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999998877899999999987 57778999999985 7888765
No 142
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-36 Score=346.02 Aligned_cols=218 Identities=25% Similarity=0.391 Sum_probs=178.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC-----ccceEEEEcCCCC-cC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV-----PQRTAAYISQHDV-HI 239 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 239 (1412)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999987 899999999886532 2367999999853 45
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC--ccccccc
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD--VCADTMV 317 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~--~~~dt~v 317 (1412)
..+||+||+.|+....+.. .++....++++++.+||+ +..|+
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~-- 140 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------------------------------EEEIENRVKRAMNIVGLDYEDYKDK-- 140 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhccC--
Confidence 5689999999865332110 011223456789999996 44444
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
.++.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.++||+|+
T Consensus 141 ---~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 141 ---SPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred ---CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 44579999999999999999999999999999999999999999999998653 36778889999999999999999
Q ss_pred EEeCCeEEEecChhhHHH---HHHhcCCCCCC
Q 000576 398 LISDGQIVYQGPREHVLE---FFEFMGFKCPE 426 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 426 (1412)
+|++|+++++|+++++.+ .....|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988753 23344555443
No 143
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-36 Score=356.45 Aligned_cols=214 Identities=25% Similarity=0.372 Sum_probs=184.9
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ .+.+|+|+|++|++||+++|+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478999998874 24699999999999999999999999999999999997654 479999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 894 KQE-TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 894 ~~~-~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
... ..++.+||++|+..+++.+||+||+.|....+. ....+.++.++++++.+++.+..+..+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 432 234679999999999999999999998765432 233445567899999999987776654 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcC
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGP 1051 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~ 1051 (1412)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++.+++|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 899999999986 68889999999985 89999998
Q ss_pred C
Q 000576 1052 L 1052 (1412)
Q Consensus 1052 ~ 1052 (1412)
+
T Consensus 218 ~ 218 (369)
T PRK11000 218 P 218 (369)
T ss_pred H
Confidence 6
No 144
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-36 Score=356.12 Aligned_cols=206 Identities=26% Similarity=0.435 Sum_probs=168.3
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCCC
Q 000576 167 TILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMT 243 (1412)
Q Consensus 167 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 243 (1412)
++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|++||.+..+... +++++||+|++. ++..|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~-lf~gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPY-LFAGT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCc-ccccc
Confidence 7999999999999999999999999999999999999987 8999999999877654 589999999755 55679
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccc
Q 000576 244 VRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIR 323 (1412)
Q Consensus 244 V~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 323 (1412)
+||||.++... ...++..++... ..+.+.+.-+++.||.+|+.+.
T Consensus 411 ireNi~l~~~~-------------------------~s~e~i~~al~~---------a~l~~~v~~p~GLdt~ige~G~- 455 (559)
T COG4988 411 IRENILLARPD-------------------------ASDEEIIAALDQ---------AGLLEFVPKPDGLDTVIGEGGA- 455 (559)
T ss_pred HHHHhhccCCc-------------------------CCHHHHHHHHHH---------hcHHHhhcCCCcccchhccCCC-
Confidence 99999997421 111111111100 0122333336788999997665
Q ss_pred cCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCe
Q 000576 324 GISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQ 403 (1412)
Q Consensus 324 ~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~ 403 (1412)
+|||||+|||++||||+++++++++||||++||.+|+..|.+.|.++++ ++|+++++|.... ..-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~---~ktvl~itHrl~~-~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK---QKTVLVITHRLED-AADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh---CCeEEEEEcChHH-HhcCCEEEEecCCc
Confidence 8999999999999999999999999999999999999999999999875 3556657777655 45679999999999
Q ss_pred EEEecChhhHHH
Q 000576 404 IVYQGPREHVLE 415 (1412)
Q Consensus 404 iv~~G~~~~~~~ 415 (1412)
++++|.++++.+
T Consensus 532 l~~~g~~~~L~~ 543 (559)
T COG4988 532 LVEQGTHEELSE 543 (559)
T ss_pred eeccCCHHHHhh
Confidence 999999999854
No 145
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=5.3e-36 Score=335.63 Aligned_cols=214 Identities=23% Similarity=0.292 Sum_probs=177.6
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCC-----CCCeEEEEEEEc
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRK-----TTGYVTGNITIS 889 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~-----~~~~~~G~i~i~ 889 (1412)
++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|.. . +.+|+|.++
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~ 65 (227)
T cd03260 1 IELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLD 65 (227)
T ss_pred CEEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEEC
Confidence 36788888773 235999999999999999999999999999999999975 3 357999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCC
Q 000576 890 GYPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGV 964 (1412)
Q Consensus 890 g~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~ 964 (1412)
|.+... ..+++.++|++|++.++ .+||+||+.+....+.. ....+.++.++++++.+++.+..+.... +
T Consensus 66 g~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~ 139 (227)
T cd03260 66 GKDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHGI--KLKEELDERVEEALRKAALWDEVKDRLH---A 139 (227)
T ss_pred CEEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCChHHhccCC---c
Confidence 987542 23456789999998877 79999999886544321 1122234567889999999876554321 2
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ +|||+++|+++ ++.+.+|++++|++ |
T Consensus 140 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G 216 (227)
T cd03260 140 LGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-G 216 (227)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-C
Confidence 479999999999999999999999999999999999999999999999876 99999999987 57788999999985 8
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
++++.|+.
T Consensus 217 ~i~~~g~~ 224 (227)
T cd03260 217 RLVEFGPT 224 (227)
T ss_pred EEEEecCc
Confidence 99999875
No 146
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-36 Score=342.50 Aligned_cols=215 Identities=24% Similarity=0.344 Sum_probs=181.1
Q ss_pred hhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-------cceE
Q 000576 157 NILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-------QRTA 229 (1412)
Q Consensus 157 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~ 229 (1412)
+++.++++.+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.+
T Consensus 28 ~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i 104 (269)
T cd03294 28 EEILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKI 104 (269)
T ss_pred hhhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcE
Confidence 45566778888999999999999999999999999999999999999887 7999999988754321 2469
Q ss_pred EEEcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCC
Q 000576 230 AYISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGL 309 (1412)
Q Consensus 230 ~yv~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL 309 (1412)
+|++|++.+++++||+||+.++....+... .+....++.+++.+||
T Consensus 105 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l 150 (269)
T cd03294 105 SMVFQSFALLPHRTVLENVAFGLEVQGVPR----------------------------------AEREERAAEALELVGL 150 (269)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCC
Confidence 999999888889999999998754321100 0011234568899999
Q ss_pred CccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 000576 310 DVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEA 389 (1412)
Q Consensus 310 ~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~ 389 (1412)
++..++.++ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++
T Consensus 151 ~~~~~~~~~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiii~tH~~~~~ 224 (269)
T cd03294 151 EGWEHKYPD-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAE-LQKTIVFITHDLDEA 224 (269)
T ss_pred HhHhhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHH
Confidence 877766654 69999999999999999999999999999999999999999999998653 356777789999999
Q ss_pred HhhcCeEEEEeCCeEEEecChhhHH
Q 000576 390 YDLFDDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 390 ~~~~D~vivL~~G~iv~~G~~~~~~ 414 (1412)
.+++|++++|++|++++.|+++++.
T Consensus 225 ~~~~d~v~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 225 LRLGDRIAIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred HHhcCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999988764
No 147
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=5.2e-36 Score=337.76 Aligned_cols=218 Identities=25% Similarity=0.383 Sum_probs=176.0
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCCCc
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHDVH 238 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~ 238 (1412)
++++.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 10 ~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l 86 (236)
T cd03219 10 FGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRL 86 (236)
T ss_pred ECCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEeccccc
Confidence 34456999999999999999999999999999999999999886 7999999998765432 2459999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++.+||+||+.++....+... ... . ....+ ..+....++++++.+||++..++.+
T Consensus 87 ~~~~tv~~~l~~~~~~~~~~~-------~~~---~---~~~~~-----------~~~~~~~~~~~l~~~~l~~~~~~~~- 141 (236)
T cd03219 87 FPELTVLENVMVAAQARTGSG-------LLL---A---RARRE-----------EREARERAEELLERVGLADLADRPA- 141 (236)
T ss_pred ccCCCHHHHHHHHHhhccccc-------ccc---c---ccccc-----------HHHHHHHHHHHHHHcCccchhhCCh-
Confidence 999999999998754321000 000 0 00000 0011234567889999987666554
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+++|+.++|+.+++.+++|++++
T Consensus 142 ----~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~vsH~~~~~~~~~d~i~~ 215 (236)
T cd03219 142 ----GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE--RGITVLLVEHDMDVVMSLADRVTV 215 (236)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEEE
Confidence 47999999999999999999999999999999999999999999999865 356777789999999999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000576 399 ISDGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~ 414 (1412)
|++|++++.|+++++.
T Consensus 216 l~~G~i~~~~~~~~~~ 231 (236)
T cd03219 216 LDQGRVIAEGTPDEVR 231 (236)
T ss_pred EeCCEEEeecCHHHhc
Confidence 9999999999988763
No 148
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=7.5e-36 Score=347.29 Aligned_cols=213 Identities=24% Similarity=0.368 Sum_probs=184.6
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ .+.+|+|+||++++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~--~~G~i~i~g~~~ 66 (301)
T TIGR03522 2 SIRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPP--DSGSVQVCGEDV 66 (301)
T ss_pred EEEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEc
Confidence 378899998874 24699999999999999999999999999999999997654 479999999876
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHH
Q 000576 894 KQ--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQ 971 (1412)
Q Consensus 894 ~~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGq 971 (1412)
.. ...++.+||++|++.+++.+||.|++.+.+.++. ...++..+.++++++.+++.+..+..+ +.|||||
T Consensus 67 ~~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~ 138 (301)
T TIGR03522 67 LQNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGY 138 (301)
T ss_pred ccChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHH
Confidence 43 2345679999999999999999999998776542 223344456889999999998877664 4799999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcC
Q 000576 972 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGP 1051 (1412)
Q Consensus 972 rqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~ 1051 (1412)
|||++||+||+++|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 139 ~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~ 215 (301)
T TIGR03522 139 RQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKK 215 (301)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCC
Confidence 9999999999999999999999999999999999999999865 799999999987 68889999999985 89999998
Q ss_pred C
Q 000576 1052 L 1052 (1412)
Q Consensus 1052 ~ 1052 (1412)
.
T Consensus 216 ~ 216 (301)
T TIGR03522 216 L 216 (301)
T ss_pred H
Confidence 6
No 149
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-36 Score=337.77 Aligned_cols=211 Identities=28% Similarity=0.392 Sum_probs=174.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMT 243 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 243 (1412)
++++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|
T Consensus 14 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t 90 (239)
T cd03296 14 DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMT 90 (239)
T ss_pred CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCC
Confidence 356999999999999999999999999999999999999886 7999999988754332 357999999988888899
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccc
Q 000576 244 VRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIR 323 (1412)
Q Consensus 244 V~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 323 (1412)
|+||+.++....+...+. +. .+....++.+++.+||++..++.+ .
T Consensus 91 v~e~l~~~~~~~~~~~~~-------------------~~-----------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 135 (239)
T cd03296 91 VFDNVAFGLRVKPRSERP-------------------PE-----------AEIRAKVHELLKLVQLDWLADRYP-----A 135 (239)
T ss_pred HHHHHhhhhhhccccccC-------------------CH-----------HHHHHHHHHHHHHcCChhhhhcCh-----h
Confidence 999999865332110000 00 011123466888999977666554 4
Q ss_pred cCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCe
Q 000576 324 GISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQ 403 (1412)
Q Consensus 324 ~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~ 403 (1412)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.+++|++++|++|+
T Consensus 136 ~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~~G~ 214 (239)
T cd03296 136 QLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDE-LHVTTVFVTHDQEEALEVADRVVVMNKGR 214 (239)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 69999999999999999999999999999999999999999999998653 35667778999999999999999999999
Q ss_pred EEEecChhhHH
Q 000576 404 IVYQGPREHVL 414 (1412)
Q Consensus 404 iv~~G~~~~~~ 414 (1412)
+++.|+++++.
T Consensus 215 i~~~~~~~~~~ 225 (239)
T cd03296 215 IEQVGTPDEVY 225 (239)
T ss_pred EEEecCHHHHh
Confidence 99999988763
No 150
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=6.2e-36 Score=356.22 Aligned_cols=218 Identities=27% Similarity=0.361 Sum_probs=185.0
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.|+ ++.+|+|+||.+++||+++|+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p--~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTP--TAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCC--CCcEEEECCEEc
Confidence 478999998874 24699999999999999999999999999999999997654 479999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLS-PEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
.. ...++.+||++|+..+++.+||+|++.+....... ........++.++++++.+++.+..+..+ +.|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 43 34567799999999998999999999875321110 01012234567899999999988777654 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
|||||+.|||+|+++|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.||++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999987 57889999999985 899999
Q ss_pred cCCC
Q 000576 1050 GPLG 1053 (1412)
Q Consensus 1050 G~~~ 1053 (1412)
|++.
T Consensus 221 G~~~ 224 (402)
T PRK09536 221 GPPA 224 (402)
T ss_pred cCHH
Confidence 9873
No 151
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=6.6e-36 Score=336.07 Aligned_cols=210 Identities=21% Similarity=0.383 Sum_probs=175.2
Q ss_pred cccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCC
Q 000576 161 SRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHD 236 (1412)
Q Consensus 161 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d 236 (1412)
++++++.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 8 ~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~ 84 (232)
T cd03218 8 KRYGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEA 84 (232)
T ss_pred EEeCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCc
Confidence 3344557999999999999999999999999999999999999887 7999999988754332 24699999998
Q ss_pred CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccc
Q 000576 237 VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 316 (1412)
Q Consensus 237 ~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 316 (1412)
.+++.+||+||+.+.....+.. + .+....++.+++.+|+++..++.
T Consensus 85 ~~~~~~tv~~~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 130 (232)
T cd03218 85 SIFRKLTVEENILAVLEIRGLS-K---------------------------------KEREEKLEELLEEFHITHLRKSK 130 (232)
T ss_pred cccccCcHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHcCChhhhhCC
Confidence 8899999999998864322110 0 01112356788899998766655
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
+ +.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.+++|++
T Consensus 131 ~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i 203 (232)
T cd03218 131 A-----SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD--RGIGVLITDHNVRETLSITDRA 203 (232)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEE
Confidence 4 46999999999999999999999999999999999999999999999864 3567777899999999999999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000576 397 ILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~ 414 (1412)
++|++|++++.|+.+++.
T Consensus 204 ~~l~~G~i~~~~~~~~~~ 221 (232)
T cd03218 204 YIIYEGKVLAEGTPEEIA 221 (232)
T ss_pred EEEECCeEEEEeCHHHhh
Confidence 999999999999987763
No 152
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-36 Score=335.41 Aligned_cols=217 Identities=24% Similarity=0.321 Sum_probs=181.4
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++.. .+.+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERP--TSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 5789999887410 0012699999999999999999999999999999999997654 4799999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 895 QE------TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 895 ~~------~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
.. ..++.++|++|++.+++.+|++||+.+....+. .......+.++++++.+++.+..+..+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCC
Confidence 31 235678999999999999999999988654332 223344556789999999987666543 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI 1047 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~ 1047 (1412)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999986 57788999999985 8999
Q ss_pred EEcCC
Q 000576 1048 YVGPL 1052 (1412)
Q Consensus 1048 y~G~~ 1052 (1412)
+.|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 98874
No 153
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=342.60 Aligned_cols=224 Identities=24% Similarity=0.363 Sum_probs=181.4
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCc-------CccceEEEEcCCC-Cc
Q 000576 167 TILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEF-------VPQRTAAYISQHD-VH 238 (1412)
Q Consensus 167 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 238 (1412)
.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999987 79999999987521 1235799999985 34
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCc-cccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDV-CADTMV 317 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-~~dt~v 317 (1412)
+...||.||+.|+.+..+... .+....++++++.+||++ ..++
T Consensus 97 l~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~-- 140 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIPK----------------------------------EKAEKIAAEKLEMVGLADEFWEK-- 140 (288)
T ss_pred cccchHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhccC--
Confidence 555799999999764322100 011234567888999963 4443
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
.++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .+.+|++++|+.+++.+++|+|+
T Consensus 141 ---~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 141 ---SPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ--SGQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred ---CcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEE
Confidence 4457999999999999999999999999999999999999999999998864 36677889999999999999999
Q ss_pred EEeCCeEEEecChhhHH---HHHHhcCCCCCCCCChhHHH
Q 000576 398 LISDGQIVYQGPREHVL---EFFEFMGFKCPERKGVADFL 434 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~---~~f~~~G~~~p~~~~~ad~l 434 (1412)
+|++|+++++|+++++. +.++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999999875 34456677776654444433
No 154
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.4e-36 Score=347.89 Aligned_cols=209 Identities=26% Similarity=0.370 Sum_probs=178.8
Q ss_pred ccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC--ccceEEEEcCCCCcC
Q 000576 162 RKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV--PQRTAAYISQHDVHI 239 (1412)
Q Consensus 162 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~ 239 (1412)
+++++.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 11 ~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~ 87 (301)
T TIGR03522 11 LYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLY 87 (301)
T ss_pred EECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCC
Confidence 334567999999999999999999999999999999999999987 899999998875422 235799999998889
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
+.+||+||+.|.++..+... .+....++.+++.+||++..|+.++
T Consensus 88 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~- 132 (301)
T TIGR03522 88 LDMYVREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG- 132 (301)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchh-
Confidence 99999999998765432100 0112235678999999988776654
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
.|||||||||+||+||+++|++|+|||||+|||+.++..+.+.|+++.. +++|+.++|..+++.++||+|++|
T Consensus 133 ----~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~---~~tiii~sH~l~~~~~~~d~i~~l 205 (301)
T TIGR03522 133 ----QLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK---DKTIILSTHIMQEVEAICDRVIII 205 (301)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC---CCEEEEEcCCHHHHHHhCCEEEEE
Confidence 6999999999999999999999999999999999999999999999742 467777999999999999999999
Q ss_pred eCCeEEEecChhhHHH
Q 000576 400 SDGQIVYQGPREHVLE 415 (1412)
Q Consensus 400 ~~G~iv~~G~~~~~~~ 415 (1412)
++|++++.|+.+++..
T Consensus 206 ~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 206 NKGKIVADKKLDELSA 221 (301)
T ss_pred ECCEEEEeCCHHHHHH
Confidence 9999999999998754
No 155
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=7.1e-36 Score=332.51 Aligned_cols=209 Identities=28% Similarity=0.406 Sum_probs=173.0
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++.. +..+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 69 (218)
T cd03255 1 IELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRP--TSGEVRVDGTDIS 69 (218)
T ss_pred CeEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCC--CceeEEECCEehh
Confidence 3678998887411 0114699999999999999999999999999999999997654 4799999998764
Q ss_pred ccc-------ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCC
Q 000576 895 QET-------FARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGL 967 (1412)
Q Consensus 895 ~~~-------~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~l 967 (1412)
... .++.++|++|++.+++.+||+|++.+....+. ......++.++++++.+++.+..+..+ ..|
T Consensus 70 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 141 (218)
T cd03255 70 KLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SEL 141 (218)
T ss_pred hcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhc
Confidence 311 24578999999999999999999998765432 222334456889999999987666543 479
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 968 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 968 SgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++ +.+|++++|++ |+
T Consensus 142 S~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 142 SGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRD-GK 217 (218)
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeC-Cc
Confidence 99999999999999999999999999999999999999999999976 5899999999986 34 48999999986 54
No 156
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-36 Score=335.27 Aligned_cols=205 Identities=27% Similarity=0.378 Sum_probs=173.2
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc------cceEEEEcCCCCcCC
Q 000576 167 TILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP------QRTAAYISQHDVHIG 240 (1412)
Q Consensus 167 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 240 (1412)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999987 7999999998764321 357999999988888
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000576 241 EMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 320 (1412)
Q Consensus 241 ~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 320 (1412)
.+||+||+.++....+... ......++.+++.+||++..+..+
T Consensus 96 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVPK----------------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 9999999988653321100 001123466889999987666544
Q ss_pred ccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe
Q 000576 321 MIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS 400 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~ 400 (1412)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRE-LGLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 479999999999999999999999999999999999999999999998653 35677778999999999999999999
Q ss_pred CCeEEEecChhhHH
Q 000576 401 DGQIVYQGPREHVL 414 (1412)
Q Consensus 401 ~G~iv~~G~~~~~~ 414 (1412)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999887763
No 157
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-36 Score=337.66 Aligned_cols=217 Identities=27% Similarity=0.336 Sum_probs=177.8
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 1 l~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 66 (241)
T cd03256 1 IEVENLSKTYPN------------GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEP--TSGSVLIDGTDIN 66 (241)
T ss_pred CEEeeEEEecCC------------ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEecc
Confidence 357888887741 14699999999999999999999999999999999997653 4799999998764
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCC
Q 000576 895 Q------ETFARISGYCEQNDIHSPQVTVYESLLYSAWLR-----LSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPG 963 (1412)
Q Consensus 895 ~------~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr-----~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~ 963 (1412)
. ...++.++|++|++.+++.+||+||+.+..... ...........+.++++++.+++.+..+..
T Consensus 67 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 141 (241)
T cd03256 67 KLKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR----- 141 (241)
T ss_pred ccCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----
Confidence 2 124567899999999999999999997753210 000111123345678899999997665544
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 142 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~ 220 (241)
T cd03256 142 ADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD 220 (241)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC
Confidence 3479999999999999999999999999999999999999999999998764 899999999987 57779999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|++++.|+.
T Consensus 221 -G~i~~~~~~ 229 (241)
T cd03256 221 -GRIVFDGPP 229 (241)
T ss_pred -CEEEeecCH
Confidence 899999875
No 158
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=8.2e-36 Score=330.79 Aligned_cols=203 Identities=30% Similarity=0.436 Sum_probs=170.1
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGE 241 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~ 241 (1412)
++++++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++++
T Consensus 10 ~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~ 86 (213)
T cd03301 10 FGNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPH 86 (213)
T ss_pred ECCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccC
Confidence 33456999999999999999999999999999999999999886 7999999998754332 3579999999888888
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
+||+||+.++.+..+... .+....++.+++.+||++..+..++
T Consensus 87 ~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 129 (213)
T cd03301 87 MTVYDNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRKPK--- 129 (213)
T ss_pred CCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCChh---
Confidence 999999988643321100 0112235668899999877666554
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+++|++++|++
T Consensus 130 --~LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~~sH~~~~~~~~~d~i~~l~~ 206 (213)
T cd03301 130 --QLSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQR-LGTTTIYVTHDQVEAMTMADRIAVMND 206 (213)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEEEC
Confidence 69999999999999999999999999999999999999999999998653 356677789999999999999999999
Q ss_pred CeEEEec
Q 000576 402 GQIVYQG 408 (1412)
Q Consensus 402 G~iv~~G 408 (1412)
|++++.|
T Consensus 207 g~~~~~g 213 (213)
T cd03301 207 GQIQQIG 213 (213)
T ss_pred CEEEecC
Confidence 9999876
No 159
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.6e-35 Score=334.60 Aligned_cols=214 Identities=20% Similarity=0.332 Sum_probs=180.8
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEI--TSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 57889998773 24599999999999999999999999999999999997653 4799999998764
Q ss_pred c-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 895 Q-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 895 ~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
. ...++.++|++|++.+++.+||+|++.+...... .....+.++.++++++.+++.+..+..+ ..|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCH
Confidence 2 2335678999999988999999999987542111 1233344566889999999987666543 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999987 57778999999985 899999
Q ss_pred cCC
Q 000576 1050 GPL 1052 (1412)
Q Consensus 1050 G~~ 1052 (1412)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 885
No 160
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.1e-35 Score=331.37 Aligned_cols=214 Identities=25% Similarity=0.403 Sum_probs=179.7
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++. .++.+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (220)
T cd03263 1 LQIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRP--TSGTAYINGYSIR 67 (220)
T ss_pred CEEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecc
Confidence 467888887741 114699999999999999999999999999999999997654 4799999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 895 Q--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 895 ~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
. ..+++.++|++|++.+++.+|++||+.+....+. ....+..+.++++++.+++.+..+..+ ..||+|||
T Consensus 68 ~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 139 (220)
T cd03263 68 TDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMK 139 (220)
T ss_pred cchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHH
Confidence 3 2345679999999988889999999988654432 223333456789999999987666543 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 140 RKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999999876 599999999987 57778999999985 899998875
No 161
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.8e-35 Score=336.39 Aligned_cols=215 Identities=24% Similarity=0.346 Sum_probs=180.7
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (250)
T PRK11264 3 AIEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQP--EAGTIRVGDITI 67 (250)
T ss_pred cEEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEc
Confidence 378999998874 23599999999999999999999999999999999997654 479999999875
Q ss_pred Cc-----------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCC
Q 000576 894 KQ-----------ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLP 962 (1412)
Q Consensus 894 ~~-----------~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~ 962 (1412)
.. ...++.++|++|++.+++..|++||+.+...... ........+.++++++.+++.+..+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~---- 141 (250)
T PRK11264 68 DTARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY---- 141 (250)
T ss_pred cccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC----
Confidence 42 1234578999999988999999999987543211 122334455688899999998765544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+.|+|||+++|+++ ++.+.+|++++|++
T Consensus 142 -~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~ 219 (250)
T PRK11264 142 -PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ 219 (250)
T ss_pred -hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999999877999999999986 57788999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|++++.|+.
T Consensus 220 -G~i~~~~~~ 228 (250)
T PRK11264 220 -GRIVEQGPA 228 (250)
T ss_pred -CEEEEeCCH
Confidence 899999875
No 162
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=331.17 Aligned_cols=217 Identities=23% Similarity=0.326 Sum_probs=179.4
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTP--TSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEc
Confidence 48899999887411 0114699999999999999999999999999999999997654 489999999876
Q ss_pred Cccc------c-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCC
Q 000576 894 KQET------F-ARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNG 966 (1412)
Q Consensus 894 ~~~~------~-~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~ 966 (1412)
.... . ++.++|++|+..+++.+|++||+.+....+ .....+.++.++++++.+++.+..+..+ ..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRP-----SE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 4321 2 256899999998899999999998865432 1223344566889999999987665543 47
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 967 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 967 lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ .|+|||+++|+++ ++ +.+|++++|.+ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~-~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LA-KRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 5899999999986 34 44689999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
++..|+.
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9998886
No 163
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.7e-36 Score=329.88 Aligned_cols=203 Identities=29% Similarity=0.391 Sum_probs=168.9
Q ss_pred EeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCcc
Q 000576 817 FDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQE 896 (1412)
Q Consensus 817 ~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~ 896 (1412)
++|+++.++. .+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+....
T Consensus 2 ~~~l~~~~~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~ 67 (205)
T cd03226 2 IENISFSYKK------------GTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKE--SSGSILLNGKPIKAK 67 (205)
T ss_pred cccEEEEeCC------------cCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEhhhH
Confidence 5677777631 13599999999999999999999999999999999997654 479999999876544
Q ss_pred cccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHH
Q 000576 897 TFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRL 975 (1412)
Q Consensus 897 ~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl 975 (1412)
..++.++|++|++. .+...|++||+.+...... . ..+.++++++.+++.+..+..+ ..||||||||+
T Consensus 68 ~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~-----~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv 135 (205)
T cd03226 68 ERRKSIGYVMQDVDYQLFTDSVREELLLGLKELD-----A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRL 135 (205)
T ss_pred HhhcceEEEecChhhhhhhccHHHHHhhhhhhcC-----c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHH
Confidence 44567999999974 3456799999987543221 1 1245788999999987766553 47999999999
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEE
Q 000576 976 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI 1047 (1412)
Q Consensus 976 ~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~ 1047 (1412)
+|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 136 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 136 AIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 9999999999999999999999999999999999999777999999999987 57778999999986 6764
No 164
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=330.74 Aligned_cols=200 Identities=28% Similarity=0.405 Sum_probs=169.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCCCHH
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVR 245 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 245 (1412)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 56999999999999999999999999999999999999886 7999999988753 246799999998888889999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccC
Q 000576 246 ETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGI 325 (1412)
Q Consensus 246 e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~L 325 (1412)
||+.++....+... .+....++.+++.+||++..+..+ ..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 99998654321100 001123566889999987666554 469
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe--CCe
Q 000576 326 SGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS--DGQ 403 (1412)
Q Consensus 326 SGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~--~G~ 403 (1412)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRE-TGKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 999999999999999999999999999999999999999999987543 35667778999999999999999999 799
Q ss_pred EEEecCh
Q 000576 404 IVYQGPR 410 (1412)
Q Consensus 404 iv~~G~~ 410 (1412)
++..++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9988764
No 165
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.1e-35 Score=331.97 Aligned_cols=207 Identities=24% Similarity=0.407 Sum_probs=170.7
Q ss_pred ccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCCC
Q 000576 162 RKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHDV 237 (1412)
Q Consensus 162 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~ 237 (1412)
+++++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.
T Consensus 9 ~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~ 85 (222)
T cd03224 9 GYGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRR 85 (222)
T ss_pred ecCCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccc
Confidence 344457999999999999999999999999999999999999987 7999999988755432 356999999988
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHh-CCCcccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKIL-GLDVCADTM 316 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l-gL~~~~dt~ 316 (1412)
+++.+||+||+.++....+. . +.....+.+++.+ ++++..++.
T Consensus 86 ~~~~~t~~~~l~~~~~~~~~-~-----------------------------------~~~~~~~~~l~~~~~l~~~~~~~ 129 (222)
T cd03224 86 IFPELTVEENLLLGAYARRR-A-----------------------------------KRKARLERVYELFPRLKERRKQL 129 (222)
T ss_pred cCCCCcHHHHHHHHhhhcCc-h-----------------------------------hHHHHHHHHHHHHHhhhhhhhCc
Confidence 89999999999886432210 0 0011233455666 465555544
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
+ +.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ .+++|++++|+.+++.+++|++
T Consensus 130 ~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i 202 (222)
T cd03224 130 A-----GTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD--EGVTILLVEQNARFALEIADRA 202 (222)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhccEE
Confidence 4 46999999999999999999999999999999999999999999999864 3567777899999999999999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000576 397 ILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~ 414 (1412)
++|++|++++.|+.+++.
T Consensus 203 ~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 203 YVLERGRVVLEGTAAELL 220 (222)
T ss_pred EEeeCCeEEEeCCHHHHh
Confidence 999999999999887753
No 166
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=6.2e-36 Score=379.08 Aligned_cols=209 Identities=27% Similarity=0.447 Sum_probs=171.7
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGE 241 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 241 (1412)
++++|+|+|++++|||.+||+||+|||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.+| +
T Consensus 341 ~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF-~ 416 (567)
T COG1132 341 KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLF-S 416 (567)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceee-c
Confidence 456999999999999999999999999999999999999997 7999999999987654 57899999965555 5
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
.||+|||.++..- .+.++..+++... ...|.+.+ ++++.||.||+++
T Consensus 417 ~TI~~NI~~g~~~-------------------------at~eei~~a~k~a-----~~~d~I~~---lp~g~dt~vge~G 463 (567)
T COG1132 417 GTIRENIALGRPD-------------------------ATDEEIEEALKLA-----NAHEFIAN---LPDGYDTIVGERG 463 (567)
T ss_pred ccHHHHHhcCCCC-------------------------CCHHHHHHHHHHh-----ChHHHHHh---CcccccceecCCC
Confidence 8999999997421 1112222222111 12233333 6888999999766
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
. .||||||||++||||++.+|+||+||||||+||+.+...|.+.++++.+ ++|+++ +.|..+.+.+ +|+|++|++
T Consensus 464 ~-~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT~ii-IaHRlsti~~-aD~IiVl~~ 538 (567)
T COG1132 464 V-NLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRTTLI-IAHRLSTIKN-ADRIIVLDN 538 (567)
T ss_pred c-cCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCEEEE-EeccHhHHHh-CCEEEEEEC
Confidence 6 6999999999999999999999999999999999999999999997653 345555 7888766655 999999999
Q ss_pred CeEEEecChhhHHH
Q 000576 402 GQIVYQGPREHVLE 415 (1412)
Q Consensus 402 G~iv~~G~~~~~~~ 415 (1412)
|++++.|+++++..
T Consensus 539 G~i~e~G~h~eLl~ 552 (567)
T COG1132 539 GRIVERGTHEELLA 552 (567)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999975
No 167
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.4e-35 Score=329.10 Aligned_cols=206 Identities=26% Similarity=0.365 Sum_probs=173.6
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTP--SRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 57889998773 123599999999999999999999999999999999997654 4799999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 895 QE------TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 895 ~~------~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
.. .+++.++|++|++.+++.+|++|++.+....+. ......++.++++++.+++.+..+..+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 31 245678999999988999999999988754331 223334456889999999987655543 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999986 577789999999863
No 168
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=7.7e-36 Score=334.30 Aligned_cols=208 Identities=23% Similarity=0.330 Sum_probs=171.0
Q ss_pred ccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCC-----CCCCCceeEEEECCccCCCcC-----ccceEEE
Q 000576 162 RKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKL-----DSSLRLYGRVTYNGHNMDEFV-----PQRTAAY 231 (1412)
Q Consensus 162 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~-----~~~~~~~G~V~~~G~~~~~~~-----~~~~~~y 231 (1412)
+++++++|+|+|+++++||+++|+||||||||||+++|+|.+ +|+ +|+|.++|+++.... .++.++|
T Consensus 9 ~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~ 85 (227)
T cd03260 9 YYGDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGM 85 (227)
T ss_pred EcCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEE
Confidence 334457999999999999999999999999999999999998 765 799999999875432 2357999
Q ss_pred EcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCc
Q 000576 232 ISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDV 311 (1412)
Q Consensus 232 v~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~ 311 (1412)
++|++.++ .+||+||+.++.+..+.... .+....++.+++.+||++
T Consensus 86 ~~q~~~~~-~~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~ 131 (227)
T cd03260 86 VFQKPNPF-PGSIYDNVAYGLRLHGIKLK---------------------------------EELDERVEEALRKAALWD 131 (227)
T ss_pred EecCchhc-cccHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCCh
Confidence 99998777 89999999986543211000 001123456888999987
Q ss_pred cccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 000576 312 CADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYD 391 (1412)
Q Consensus 312 ~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~ 391 (1412)
..+..+. +..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++ + ++|++++|+.+++.+
T Consensus 132 ~~~~~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~ 205 (227)
T cd03260 132 EVKDRLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAAR 205 (227)
T ss_pred HHhccCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHH
Confidence 6554430 347999999999999999999999999999999999999999999999865 3 677778999999999
Q ss_pred hcCeEEEEeCCeEEEecChhh
Q 000576 392 LFDDIILISDGQIVYQGPREH 412 (1412)
Q Consensus 392 ~~D~vivL~~G~iv~~G~~~~ 412 (1412)
++|++++|++|++++.|++++
T Consensus 206 ~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 206 VADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred hCCEEEEEeCCEEEEecCccc
Confidence 999999999999999998765
No 169
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.2e-35 Score=349.64 Aligned_cols=202 Identities=24% Similarity=0.304 Sum_probs=176.8
Q ss_pred ceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCcc---cc----cceEEEeccCCCC
Q 000576 839 RLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQE---TF----ARISGYCEQNDIH 911 (1412)
Q Consensus 839 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~~yv~Q~~~~ 911 (1412)
.+.+|+|+||+|++||+++|+|||||||||||++|+|...+ .+|+|.++|.++... .+ ++.++||+|+..+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p--~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEP--TAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCC--CceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 35699999999999999999999999999999999997654 479999999886532 22 5689999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000576 912 SPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 991 (1412)
Q Consensus 912 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlD 991 (1412)
+|++||+||+.|...+. ....++..+++.++++.++|.+..+... ..|||||||||+|||||+.+|+||+||
T Consensus 83 ~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 83 FPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999876543 2344556678899999999987776654 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 992 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 992 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|||++||+.++..+++.++++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|++
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~ 214 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTP 214 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCH
Confidence 999999999999999999998754 899999999986 57889999999985 899999986
No 170
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=9.7e-36 Score=331.90 Aligned_cols=203 Identities=28% Similarity=0.429 Sum_probs=171.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC--ccceEEEEcCCCCcCCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGEMT 243 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 243 (1412)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 56999999999999999999999999999999999999887 899999998875321 2356999999988888999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccc
Q 000576 244 VRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIR 323 (1412)
Q Consensus 244 V~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 323 (1412)
|+||+.+..+..+... .+....++++++.+||++..++.++
T Consensus 92 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 132 (220)
T cd03263 92 VREHLRFYARLKGLPK----------------------------------SEIKEEVELLLRVLGLTDKANKRAR----- 132 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhChhh-----
Confidence 9999988654322100 0011234567889999877766554
Q ss_pred cCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCe
Q 000576 324 GISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQ 403 (1412)
Q Consensus 324 ~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~ 403 (1412)
.||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++++ +.+++.++|+.+++.+++|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK---GRSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc---CCEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999753 3677778999999999999999999999
Q ss_pred EEEecChhhH
Q 000576 404 IVYQGPREHV 413 (1412)
Q Consensus 404 iv~~G~~~~~ 413 (1412)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 171
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=343.94 Aligned_cols=218 Identities=23% Similarity=0.350 Sum_probs=176.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCc-------CccceEEEEcCCC-C
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEF-------VPQRTAAYISQHD-V 237 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~ 237 (1412)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++ .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 45999999999999999999999999999999999999987 79999999987531 1135799999985 2
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC-cccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD-VCADTM 316 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 316 (1412)
.+...||+||+.|+.+..+... .+....++.+++.+||+ +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVSE----------------------------------EDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCChhhhhCC
Confidence 4556799999998754322100 01122456789999996 445544
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++.. .+++|++++|+.+++.+++|+|
T Consensus 143 -----~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 -----PFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEE
Confidence 4479999999999999999999999999999999999999999999998653 3667777999999999999999
Q ss_pred EEEeCCeEEEecChhhHHH---HHHhcCCCCCC
Q 000576 397 ILISDGQIVYQGPREHVLE---FFEFMGFKCPE 426 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 426 (1412)
++|++|+++++|+++++.+ .+...++.+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 9999999999999988742 23344444443
No 172
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.3e-35 Score=331.48 Aligned_cols=211 Identities=28% Similarity=0.427 Sum_probs=175.1
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++ .+.+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 65 (222)
T cd03224 1 LEVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPP--RSGSIRFDGRDIT 65 (222)
T ss_pred CEEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcC
Confidence 46788888763 23589999999999999999999999999999999997654 4799999998754
Q ss_pred cc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCchhhhcccCCCCCCCCCH
Q 000576 895 QE---T-FARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELV-ELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 895 ~~---~-~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~vg~~~~~~lSg 969 (1412)
.. . .++.++|++|++.+++.+|++||+.+...... ..+.+..++++++.+ ++.+..+.. ...|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~ 135 (222)
T cd03224 66 GLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSG 135 (222)
T ss_pred CCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCH
Confidence 32 1 24568999999999999999999988654321 122334566777777 465554543 347999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||+++|+++ ++.+.+|++++|++ |+++..
T Consensus 136 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 213 (222)
T cd03224 136 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLE 213 (222)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEe
Confidence 9999999999999999999999999999999999999999999877899999999986 57788999999985 899998
Q ss_pred cCC
Q 000576 1050 GPL 1052 (1412)
Q Consensus 1050 G~~ 1052 (1412)
|+.
T Consensus 214 ~~~ 216 (222)
T cd03224 214 GTA 216 (222)
T ss_pred CCH
Confidence 875
No 173
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.4e-35 Score=329.28 Aligned_cols=207 Identities=26% Similarity=0.379 Sum_probs=173.9
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ +.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 1 l~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 66 (214)
T cd03292 1 IEFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELP--TSGTIRVNGQDVS 66 (214)
T ss_pred CEEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcc
Confidence 35788888773 124699999999999999999999999999999999997554 4799999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 895 QE------TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 895 ~~------~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
.. ..++.++|++|++.+++.+|++||+.+....+. ...++.++.++++++.+++.+..+..+ ..||
T Consensus 67 ~~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (214)
T cd03292 67 DLRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELS 138 (214)
T ss_pred cCCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcC
Confidence 21 245679999999999999999999988754332 223344556889999999987666543 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.++|+|||+++|++. .+.+.+|++++|++ |+
T Consensus 139 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 139 GGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999999999999999999999999998777999999999986 56778999999985 54
No 174
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.4e-36 Score=329.50 Aligned_cols=201 Identities=24% Similarity=0.370 Sum_probs=168.9
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 242 (1412)
++++.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+
T Consensus 10 ~~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~ 85 (210)
T cd03269 10 FGRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKM 85 (210)
T ss_pred ECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCC
Confidence 34456999999999999999999999999999999999999886 8999999987754 2346799999998888889
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
||+||+.+..+..+... .+....++++++.+||++..++.+
T Consensus 86 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 126 (210)
T cd03269 86 KVIDQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV----- 126 (210)
T ss_pred cHHHHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----
Confidence 99999988654322100 011123566888999987666554
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ++.+|+.++|+.+++.+++|++++|++|
T Consensus 127 ~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i~~l~~g 204 (210)
T cd03269 127 EELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR--AGKTVILSTHQMELVEELCDRVLLLNKG 204 (210)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEECCCHHHHHHhhhEEEEEeCC
Confidence 46999999999999999999999999999999999999999999999764 3567777899999999999999999999
Q ss_pred eEEEec
Q 000576 403 QIVYQG 408 (1412)
Q Consensus 403 ~iv~~G 408 (1412)
++++.|
T Consensus 205 ~i~~~~ 210 (210)
T cd03269 205 RAVLYG 210 (210)
T ss_pred EEEecC
Confidence 998764
No 175
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-35 Score=334.29 Aligned_cols=212 Identities=26% Similarity=0.337 Sum_probs=179.0
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPY--QHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 67899998773 24599999999999999999999999999999999997654 4799999998764
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHH
Q 000576 895 QETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKR 974 (1412)
Q Consensus 895 ~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqR 974 (1412)
. ..+.++|++|+..+++.+||+||+.+....+. ....+.++.++++++.+++.+..+..+ ..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLAG---VEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHH
Confidence 3 23457999999988899999999987644321 223344556889999999987665443 4799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEec-CcEEEEEcCC
Q 000576 975 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKR-GGQEIYVGPL 1052 (1412)
Q Consensus 975 l~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~-gG~~~y~G~~ 1052 (1412)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999987 57788999999985 5899988765
No 176
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=334.07 Aligned_cols=214 Identities=25% Similarity=0.365 Sum_probs=179.5
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++. .+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 66 (242)
T cd03295 1 IEFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEP--TSGEIFIDGEDIR 66 (242)
T ss_pred CEEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCeEcC
Confidence 357888887741 13599999999999999999999999999999999997654 4799999998754
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch--hhhcccCCCCCCCCCH
Q 000576 895 Q---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL--LRQALVGLPGVNGLST 969 (1412)
Q Consensus 895 ~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~vg~~~~~~lSg 969 (1412)
. ...++.++|++|++.+++.+||+||+.+...++. .......+.++++++.+++.+ ..+.. .+.|||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~ 138 (242)
T cd03295 67 EQDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSG 138 (242)
T ss_pred cCChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCH
Confidence 2 2345678999999999999999999987654431 223344556889999999975 44443 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 139 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (242)
T cd03295 139 GQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQ 216 (242)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 899999999986 57788999999985 89999
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
.|+.
T Consensus 217 ~~~~ 220 (242)
T cd03295 217 VGTP 220 (242)
T ss_pred ecCH
Confidence 8875
No 177
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=341.20 Aligned_cols=219 Identities=21% Similarity=0.314 Sum_probs=180.7
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++||++.|+... ...+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 71 (287)
T PRK13637 2 SIKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKP--TSGKIIIDGVDI 71 (287)
T ss_pred EEEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CccEEEECCEEC
Confidence 378999999884210 0124699999999999999999999999999999999997654 479999999886
Q ss_pred Cc-----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc--hhhhcccCCCCCC
Q 000576 894 KQ-----ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN--LLRQALVGLPGVN 965 (1412)
Q Consensus 894 ~~-----~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~--~~~~~~vg~~~~~ 965 (1412)
.. ...++.+||++|++. .+...||+|++.|..... ....++..+.++++++.++|. +..+.. ..
T Consensus 72 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~ 143 (287)
T PRK13637 72 TDKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PF 143 (287)
T ss_pred CCcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----cc
Confidence 53 134567999999863 334579999998865432 234455556789999999996 444443 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
.||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |
T Consensus 144 ~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G 221 (287)
T PRK13637 144 ELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-G 221 (287)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999986 57788999999985 8
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13637 222 KCELQGTP 229 (287)
T ss_pred EEEEECCH
Confidence 99999985
No 178
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.2e-35 Score=353.61 Aligned_cols=212 Identities=26% Similarity=0.437 Sum_probs=178.1
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHI 239 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~ 239 (1412)
++++++|+|+|+.|++||+++|+||||||||||||+|+|.++|+ +|+|.++|+++..... ++.++||+|+..++
T Consensus 13 y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~ 89 (402)
T PRK09536 13 FGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLS 89 (402)
T ss_pred ECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCC
Confidence 34567999999999999999999999999999999999999987 7999999998765432 36799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
+.+||+||+.++..... .++. .. ..+....++++++.+||.+..|+.+
T Consensus 90 ~~~tv~e~v~~~~~~~~--~~~~----------------~~------------~~~~~~~v~~~le~vgl~~~~~~~~-- 137 (402)
T PRK09536 90 FEFDVRQVVEMGRTPHR--SRFD----------------TW------------TETDRAAVERAMERTGVAQFADRPV-- 137 (402)
T ss_pred CCCCHHHHHHhccchhc--cccc----------------CC------------CHHHHHHHHHHHHHcCCchhhcCCh--
Confidence 99999999998642110 0000 00 0012234677899999987776554
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
+.|||||||||.|||||+++|++|+|||||+|||+.++.++.+.|+++++ .+++|++++|+.+++.+++|++++|
T Consensus 138 ---~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~--~g~TIIivsHdl~~~~~~adrii~l 212 (402)
T PRK09536 138 ---TSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD--DGKTAVAAIHDLDLAARYCDELVLL 212 (402)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEECCHHHHHHhCCEEEEE
Confidence 47999999999999999999999999999999999999999999999875 3567777999999999999999999
Q ss_pred eCCeEEEecChhhHH
Q 000576 400 SDGQIVYQGPREHVL 414 (1412)
Q Consensus 400 ~~G~iv~~G~~~~~~ 414 (1412)
++|++++.|+++++.
T Consensus 213 ~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 213 ADGRVRAAGPPADVL 227 (402)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999998864
No 179
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=8.4e-36 Score=331.38 Aligned_cols=195 Identities=24% Similarity=0.378 Sum_probs=164.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC------ccceEEEEcCCCCcC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV------PQRTAAYISQHDVHI 239 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 239 (1412)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999999887 799999998875432 235799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
+.+||+||+.++.+..+... .+....++.+++.+||++..++.+
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 136 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHALP-- 136 (216)
T ss_pred ccccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 89999999998754321100 001123566889999987666554
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.+++|++++|
T Consensus 137 ---~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 137 ---MQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR--RGTTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999854 3567777999999999999999999
Q ss_pred eCCeE
Q 000576 400 SDGQI 404 (1412)
Q Consensus 400 ~~G~i 404 (1412)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99974
No 180
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.1e-35 Score=336.72 Aligned_cols=217 Identities=24% Similarity=0.294 Sum_probs=177.7
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ .++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEP--SSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CccEEEECCEEhh
Confidence 57889988763 023599999999999999999999999999999999997654 4799999998754
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCC
Q 000576 895 Q------ETFARISGYCEQNDIHSPQVTVYESLLYSAWLR-----LSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPG 963 (1412)
Q Consensus 895 ~------~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr-----~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~ 963 (1412)
. ..+++.++|++|++.+++.+||+||+.+..... ........+.++.++++++.+++.+..+..
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 142 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR----- 142 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----
Confidence 2 124567999999998999999999997642110 000111223345678899999998766554
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
...||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ .+.+.||++++|++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 3479999999999999999999999999999999999999999999998754 899999999987 57788999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|++++.|+.
T Consensus 222 -G~i~~~~~~ 230 (243)
T TIGR02315 222 -GEIVFDGAP 230 (243)
T ss_pred -CEEEecCCH
Confidence 899998875
No 181
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=334.66 Aligned_cols=214 Identities=29% Similarity=0.409 Sum_probs=173.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC------ccceEEEEcCCCCcC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV------PQRTAAYISQHDVHI 239 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 239 (1412)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 56999999999999999999999999999999999999886 799999999876543 135799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
+.+||+||+.++..... .... .. .+..+ ......++.+++.+||++..++.+
T Consensus 91 ~~~tv~~~l~~~~~~~~--~~~~---~~------~~~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~-- 142 (241)
T cd03256 91 ERLSVLENVLSGRLGRR--STWR---SL------FGLFP---------------KEEKQRALAALERVGLLDKAYQRA-- 142 (241)
T ss_pred ccCcHHHHHHhhhcccc--hhhh---hh------cccCc---------------HHHHHHHHHHHHHcCChhhhCCCc--
Confidence 89999999987642110 0000 00 00000 011123456788999976655544
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+++|++++|
T Consensus 143 ---~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 143 ---DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINRE-EGITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 479999999999999999999999999999999999999999999998653 3567777899999999999999999
Q ss_pred eCCeEEEecChhhHH
Q 000576 400 SDGQIVYQGPREHVL 414 (1412)
Q Consensus 400 ~~G~iv~~G~~~~~~ 414 (1412)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988763
No 182
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=338.52 Aligned_cols=215 Identities=25% Similarity=0.327 Sum_probs=180.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++. ...+|+|+|++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYKD------------GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLP--QRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeCC------------CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 4789999988741 23599999999999999999999999999999999997654 479999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQ---ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
.. ...++.+||++|++. .++..||.|++.|..... .....+.++.++++++.+++.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 223467999999863 445689999998764321 2233344456889999999987766654 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ .+.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 46788999999985 899999
Q ss_pred cCC
Q 000576 1050 GPL 1052 (1412)
Q Consensus 1050 G~~ 1052 (1412)
|++
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 985
No 183
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-35 Score=338.15 Aligned_cols=205 Identities=20% Similarity=0.330 Sum_probs=172.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCC-CcCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHD-VHIGE 241 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 241 (1412)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35999999999999999999999999999999999999987 8999999998764322 35799999986 36778
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
+||+||+.|+.+..+... .+....++++++.+||++..|..+
T Consensus 97 ~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~---- 138 (279)
T PRK13650 97 ATVEDDVAFGLENKGIPH----------------------------------EEMKERVNEALELVGMQDFKEREP---- 138 (279)
T ss_pred ccHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc----
Confidence 899999998753322100 011224567899999987666554
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++ ..+|+|++|++
T Consensus 139 -~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tilivtH~~~~~-~~~dri~~l~~ 215 (279)
T PRK13650 139 -ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDD-YQMTVISITHDLDEV-ALSDRVLVMKN 215 (279)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 479999999999999999999999999999999999999999999998653 366777788998888 58999999999
Q ss_pred CeEEEecChhhHH
Q 000576 402 GQIVYQGPREHVL 414 (1412)
Q Consensus 402 G~iv~~G~~~~~~ 414 (1412)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (279)
T PRK13650 216 GQVESTSTPRELF 228 (279)
T ss_pred CEEEEECCHHHHH
Confidence 9999999998875
No 184
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-35 Score=338.36 Aligned_cols=202 Identities=24% Similarity=0.307 Sum_probs=172.0
Q ss_pred ceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCcc---c----ccceEEEeccCCCC
Q 000576 839 RLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQE---T----FARISGYCEQNDIH 911 (1412)
Q Consensus 839 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~~yv~Q~~~~ 911 (1412)
.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.... . .++.++|++|++.+
T Consensus 36 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 113 (269)
T cd03294 36 QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFAL 113 (269)
T ss_pred CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcEEEEecCccc
Confidence 35699999999999999999999999999999999997654 479999999876421 1 13568999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEe
Q 000576 912 SPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 991 (1412)
Q Consensus 912 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlD 991 (1412)
++.+||+||+.+...... .......+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+||
T Consensus 114 ~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illLD 185 (269)
T cd03294 114 LPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLMD 185 (269)
T ss_pred CCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 999999999988654321 223334456888999999987776654 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 992 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 992 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 186 EPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 186 EAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999998754 899999999986 57788999999985 899999875
No 185
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1e-35 Score=327.85 Aligned_cols=198 Identities=25% Similarity=0.346 Sum_probs=164.5
Q ss_pred cccccc-ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCC-
Q 000576 160 SSRKKH-ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDV- 237 (1412)
Q Consensus 160 ~~~~~~-~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~- 237 (1412)
++++++ +++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++.
T Consensus 6 ~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~ 82 (205)
T cd03226 6 SFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDY 82 (205)
T ss_pred EEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhh
Confidence 333444 57999999999999999999999999999999999999887 8999999988754333467999999863
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
.++.+||+||+.++....+ .....++.+++.+||++..++.+
T Consensus 83 ~~~~~tv~e~l~~~~~~~~--------------------------------------~~~~~~~~~l~~~~l~~~~~~~~ 124 (205)
T cd03226 83 QLFTDSVREELLLGLKELD--------------------------------------AGNEQAETVLKDLDLYALKERHP 124 (205)
T ss_pred hhhhccHHHHHhhhhhhcC--------------------------------------ccHHHHHHHHHHcCCchhcCCCc
Confidence 3557899999987542210 00113456889999987766555
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
+ .||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ .+.+++.++|+.+++.+++|+++
T Consensus 125 ~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i~ 197 (205)
T cd03226 125 L-----SLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA--QGKAVIVITHDYEFLAKVCDRVL 197 (205)
T ss_pred h-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEE
Confidence 4 6999999999999999999999999999999999999999999999864 35677778999999999999999
Q ss_pred EEeCCeEE
Q 000576 398 LISDGQIV 405 (1412)
Q Consensus 398 vL~~G~iv 405 (1412)
+|++|+++
T Consensus 198 ~l~~G~iv 205 (205)
T cd03226 198 LLANGAIV 205 (205)
T ss_pred EEECCEEC
Confidence 99999875
No 186
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-35 Score=333.71 Aligned_cols=206 Identities=27% Similarity=0.415 Sum_probs=172.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 242 (1412)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 56999999999999999999999999999999999999886 7999999988754322 35789999998888899
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCc--cccccccCc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDV--CADTMVGDE 320 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~--~~dt~vg~~ 320 (1412)
||+||+.++.+..+... .+....++.+++.+||++ ..++
T Consensus 91 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~~----- 131 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFADR----- 131 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHhc-----
Confidence 99999988643321100 001123456888999975 4443
Q ss_pred ccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe
Q 000576 321 MIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS 400 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~ 400 (1412)
.++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+++|+|++|+
T Consensus 132 ~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 132 YPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQE-LGKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 34579999999999999999999999999999999999999999999998653 35677778999999999999999999
Q ss_pred CCeEEEecChhhHH
Q 000576 401 DGQIVYQGPREHVL 414 (1412)
Q Consensus 401 ~G~iv~~G~~~~~~ 414 (1412)
+|++++.|+++++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999987763
No 187
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4e-35 Score=336.37 Aligned_cols=215 Identities=19% Similarity=0.310 Sum_probs=181.0
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP--DHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEc
Confidence 589999998873 24699999999999999999999999999999999997654 479999999876
Q ss_pred Ccc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCC
Q 000576 894 KQE------TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGL 967 (1412)
Q Consensus 894 ~~~------~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~l 967 (1412)
... ..++.++|++|+..+++.+||.||+.+...... .......++.+.++++.+++.+..+..+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 421 134568999999988999999999987543211 1223334456788999999987766543 479
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEE
Q 000576 968 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQE 1046 (1412)
Q Consensus 968 SgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~ 1046 (1412)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999986 57788999999985 899
Q ss_pred EEEcCC
Q 000576 1047 IYVGPL 1052 (1412)
Q Consensus 1047 ~y~G~~ 1052 (1412)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 999885
No 188
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=338.57 Aligned_cols=204 Identities=26% Similarity=0.324 Sum_probs=171.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCC-cCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDV-HIGE 241 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 241 (1412)
.++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 18 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (274)
T PRK13647 18 TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFS 94 (274)
T ss_pred CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhcc
Confidence 35999999999999999999999999999999999999987 7999999998764322 357999999852 5667
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
+||+||+.|+.+..+.. ..+....++.+++.+||.+..++.+.
T Consensus 95 ~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~~--- 137 (274)
T PRK13647 95 STVWDDVAFGPVNMGLD----------------------------------KDEVERRVEEALKAVRMWDFRDKPPY--- 137 (274)
T ss_pred CcHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCHHHhcCChh---
Confidence 89999999864322110 00112235678899999876665554
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|++++. . +.+|+.++|+.+++.+++|+|++|++
T Consensus 138 --~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~ 213 (274)
T PRK13647 138 --HLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKE 213 (274)
T ss_pred --hCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999864 3 66777799999999999999999999
Q ss_pred CeEEEecChhhH
Q 000576 402 GQIVYQGPREHV 413 (1412)
Q Consensus 402 G~iv~~G~~~~~ 413 (1412)
|++++.|+++++
T Consensus 214 G~i~~~g~~~~~ 225 (274)
T PRK13647 214 GRVLAEGDKSLL 225 (274)
T ss_pred CEEEEECCHHHh
Confidence 999999998654
No 189
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=350.82 Aligned_cols=211 Identities=23% Similarity=0.335 Sum_probs=179.2
Q ss_pred cccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-------cceEEEEc
Q 000576 161 SRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-------QRTAAYIS 233 (1412)
Q Consensus 161 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~ 233 (1412)
+.++...+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+
T Consensus 36 ~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~ 112 (400)
T PRK10070 36 EKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVF 112 (400)
T ss_pred hhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEE
Confidence 3445667999999999999999999999999999999999999987 7999999998765432 24799999
Q ss_pred CCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccc
Q 000576 234 QHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCA 313 (1412)
Q Consensus 234 Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 313 (1412)
|+..+++++||+||+.|+.+..+... .+....++++++.+||++..
T Consensus 113 Q~~~l~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~ 158 (400)
T PRK10070 113 QSFALMPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYA 158 (400)
T ss_pred CCCcCCCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhh
Confidence 99999999999999999765432100 01112356789999998766
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000576 314 DTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLF 393 (1412)
Q Consensus 314 dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~ 393 (1412)
++.+ +.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+++
T Consensus 159 ~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~-~g~TIIivTHd~~~~~~~~ 232 (400)
T PRK10070 159 HSYP-----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAK-HQRTIVFISHDLDEAMRIG 232 (400)
T ss_pred hcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-CCCeEEEEECCHHHHHHhC
Confidence 6554 479999999999999999999999999999999999999999999998653 3567777999999999999
Q ss_pred CeEEEEeCCeEEEecChhhHH
Q 000576 394 DDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 394 D~vivL~~G~iv~~G~~~~~~ 414 (1412)
|+|++|++|+++..|+++++.
T Consensus 233 Dri~vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 233 DRIAIMQNGEVVQVGTPDEIL 253 (400)
T ss_pred CEEEEEECCEEEecCCHHHHH
Confidence 999999999999999988874
No 190
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-35 Score=316.98 Aligned_cols=217 Identities=27% Similarity=0.369 Sum_probs=187.1
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
-++.++++.++. ...+++|||+++++||++||+||||||||||+|+|+|...+ .+|+|.++|.++
T Consensus 4 lL~v~~l~k~FG-------------Gl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~i 68 (250)
T COG0411 4 LLEVRGLSKRFG-------------GLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDI 68 (250)
T ss_pred eeeeccceeecC-------------CEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCccc
Confidence 367888887763 57899999999999999999999999999999999997765 479999999987
Q ss_pred Cccc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhcC--------CCC-CCHHHHHHHHHHHHHHcCCchhhhcccC
Q 000576 894 KQET----FARISGYCEQNDIHSPQVTVYESLLYSAWLRL--------SPE-VDSKTRKMFIEEVMELVELNLLRQALVG 960 (1412)
Q Consensus 894 ~~~~----~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~--------~~~-~~~~~~~~~v~~~l~~l~l~~~~~~~vg 960 (1412)
.... .+.-++-.+|...+++.+||.||+..++..+. +.. ...++..++..++++.+||.+.+|...|
T Consensus 69 t~l~p~~iar~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~ 148 (250)
T COG0411 69 TGLPPHRIARLGIARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG 148 (250)
T ss_pred CCCCHHHHHhccceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh
Confidence 6422 23457788999999999999999988755331 111 1234455678899999999999998865
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeE
Q 000576 961 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFL 1039 (1412)
Q Consensus 961 ~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~l 1039 (1412)
+||+||||||.|||||+.+|++|+||||.+||.+.....+.+.|+++.++ |.||+++-|+.+ -++.+||||++
T Consensus 149 -----~LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~V 222 (250)
T COG0411 149 -----NLSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIVV 222 (250)
T ss_pred -----cCChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEEe
Confidence 69999999999999999999999999999999999999999999999874 799999999998 48999999999
Q ss_pred EecCcEEEEEcCC
Q 000576 1040 LKRGGQEIYVGPL 1052 (1412)
Q Consensus 1040 l~~gG~~~y~G~~ 1052 (1412)
|+. |+++..|++
T Consensus 223 l~~-G~~IAeG~P 234 (250)
T COG0411 223 LNY-GEVIAEGTP 234 (250)
T ss_pred ccC-CcCcccCCH
Confidence 995 899999998
No 191
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-35 Score=342.39 Aligned_cols=217 Identities=20% Similarity=0.396 Sum_probs=174.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCc-------------------Ccc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEF-------------------VPQ 226 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------------------~~~ 226 (1412)
+++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|+++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35999999999999999999999999999999999999987 79999999887532 113
Q ss_pred ceEEEEcCCC-CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHH
Q 000576 227 RTAAYISQHD-VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILK 305 (1412)
Q Consensus 227 ~~~~yv~Q~d-~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 305 (1412)
+.++||+|++ ..+...||+||+.|+....+.. . .+....++.+++
T Consensus 116 ~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 161 (320)
T PRK13631 116 RRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVK-K---------------------------------SEAKKLAKFYLN 161 (320)
T ss_pred hcEEEEEECchhccccchHHHHHHhhHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 6799999985 2344569999999874322110 0 011123556888
Q ss_pred HhCCC-ccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEec
Q 000576 306 ILGLD-VCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQ 384 (1412)
Q Consensus 306 ~lgL~-~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~ 384 (1412)
.+||+ ...+ +.+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.. +++||++++|
T Consensus 162 ~~gL~~~~~~-----~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~--~g~TiiivtH 234 (320)
T PRK13631 162 KMGLDDSYLE-----RSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA--NNKTVFVITH 234 (320)
T ss_pred HcCCChhHhc-----CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEec
Confidence 99996 3344 33457999999999999999999999999999999999999999999998754 3667777999
Q ss_pred ChhhHHhhcCeEEEEeCCeEEEecChhhHHH---HHHhcCCCCCC
Q 000576 385 PAPEAYDLFDDIILISDGQIVYQGPREHVLE---FFEFMGFKCPE 426 (1412)
Q Consensus 385 ~~~~~~~~~D~vivL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 426 (1412)
+.+++.+++|+|++|++|++++.|+++++.+ .++..|+..|.
T Consensus 235 d~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 235 TMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred CHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 9999999999999999999999999988742 34445555544
No 192
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-35 Score=325.80 Aligned_cols=209 Identities=33% Similarity=0.489 Sum_probs=175.7
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ .+.+|+|+|+++++| +++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 64 (211)
T cd03264 1 LQLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPP--SSGTIRIDGQDVL 64 (211)
T ss_pred CEEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCCccc
Confidence 36788888773 236999999999999 9999999999999999999997654 4799999998754
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 895 Q--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 895 ~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
. ...++.++|++|++.+++.+||.|++.+....+. ....+.++.++++++.+++.+..+..+ ..||||||
T Consensus 65 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 136 (211)
T cd03264 65 KQPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMR 136 (211)
T ss_pred cchHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHH
Confidence 3 2345678999999999999999999988655432 222333456788999999987766543 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ +.|||+++|++. .+.+.+|++++|++ |++++.|
T Consensus 137 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 137 RRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999999876 599999999986 46778999999985 7888764
No 193
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.7e-35 Score=337.70 Aligned_cols=208 Identities=22% Similarity=0.352 Sum_probs=173.6
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc------cceEEEEcCCCCc
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP------QRTAAYISQHDVH 238 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~ 238 (1412)
++.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+
T Consensus 19 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 95 (269)
T PRK11831 19 NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGAL 95 (269)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEeccccc
Confidence 456999999999999999999999999999999999999886 7999999988754321 3569999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++++||+||+.++...... ++ . .+....++.+++.+||++..++.++
T Consensus 96 ~~~~tv~enl~~~~~~~~~---~~------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~ 142 (269)
T PRK11831 96 FTDMNVFDNVAYPLREHTQ---LP------A------------------------PLLHSTVMMKLEAVGLRGAAKLMPS 142 (269)
T ss_pred CCCCCHHHHHHHHHHHccC---CC------H------------------------HHHHHHHHHHHHHcCChhhhhCChh
Confidence 8889999999886421100 00 0 0011234567889999887766554
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+++|++++
T Consensus 143 -----~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~v~~ 216 (269)
T PRK11831 143 -----ELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVPEVLSIADHAYI 216 (269)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhhCEEEE
Confidence 69999999999999999999999999999999999999999999998653 356777789999999999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000576 399 ISDGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~ 414 (1412)
|++|++++.|+++++.
T Consensus 217 l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 217 VADKKIVAHGSAQALQ 232 (269)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988764
No 194
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.8e-36 Score=324.01 Aligned_cols=224 Identities=25% Similarity=0.368 Sum_probs=195.7
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-------cceEEEEcCC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-------QRTAAYISQH 235 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 235 (1412)
.+...-++|+|++|+.||+..|+|=||||||||+++|.++.+|+ +|+|.++|.++..... ++.+++|+|+
T Consensus 38 tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~ 114 (386)
T COG4175 38 TGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQS 114 (386)
T ss_pred hCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhh
Confidence 34455799999999999999999999999999999999999998 8999999999876544 3679999999
Q ss_pred CCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccc
Q 000576 236 DVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADT 315 (1412)
Q Consensus 236 d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 315 (1412)
..++|+.||.||..|+.+.+|+... +.+.+..+.|+.+||+...+.
T Consensus 115 FaLlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~ 160 (386)
T COG4175 115 FALLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADK 160 (386)
T ss_pred hccccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhc
Confidence 9999999999999999999886421 223345678999999988875
Q ss_pred cccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000576 316 MVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDD 395 (1412)
Q Consensus 316 ~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~ 395 (1412)
++ +.||||+||||.|||||+.+|+||+||||+|+|||--+.+..+.|.++-+.. ++||+.++|+.+|++++.||
T Consensus 161 yp-----~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l-~KTIvFitHDLdEAlriG~r 234 (386)
T COG4175 161 YP-----NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKL-KKTIVFITHDLDEALRIGDR 234 (386)
T ss_pred Cc-----ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHh-CCeEEEEecCHHHHHhccce
Confidence 54 4799999999999999999999999999999999999999999999987665 56677799999999999999
Q ss_pred EEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhh
Q 000576 396 IILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEV 437 (1412)
Q Consensus 396 vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v 437 (1412)
|.+|.+|+|+..|+++|++. .|...-+++|...+
T Consensus 235 IaimkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 235 IAIMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EEEecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 99999999999999999964 46666667776654
No 195
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.7e-35 Score=326.98 Aligned_cols=198 Identities=24% Similarity=0.382 Sum_probs=167.4
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCc-CccceEEEEcCCCCcCCC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEF-VPQRTAAYISQHDVHIGE 241 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~ 241 (1412)
++++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.
T Consensus 10 ~~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~ 86 (208)
T cd03268 10 YGKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPN 86 (208)
T ss_pred ECCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCcc
Confidence 34457999999999999999999999999999999999999886 89999999877542 123579999999888889
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
+||+||+.+.....+. ....++.+++.+||++..++.+
T Consensus 87 ~tv~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~---- 124 (208)
T cd03268 87 LTARENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKV---- 124 (208)
T ss_pred CcHHHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhH----
Confidence 9999999886432110 0112456788899987666554
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
..|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+ .+.++++++|+.+++.+++|++++|++
T Consensus 125 -~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~d~v~~l~~ 201 (208)
T cd03268 125 -KGFSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD--QGITVLISSHLLSEIQKVADRIGIINK 201 (208)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHhcCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999865 356677789999999999999999999
Q ss_pred CeEEEec
Q 000576 402 GQIVYQG 408 (1412)
Q Consensus 402 G~iv~~G 408 (1412)
|++++.|
T Consensus 202 g~i~~~g 208 (208)
T cd03268 202 GKLIEEG 208 (208)
T ss_pred CEEEecC
Confidence 9998765
No 196
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-35 Score=332.06 Aligned_cols=215 Identities=27% Similarity=0.384 Sum_probs=181.1
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (241)
T PRK10895 3 TLTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPR--DAGNIIIDDEDI 67 (241)
T ss_pred eEEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEC
Confidence 478899998873 24699999999999999999999999999999999997654 479999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQE----TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~~----~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
... ..++.++|++|++.+++.+||.||+.+...++. ....++.+..++++++.+++.+..+.. .+.|||
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 140 (241)
T PRK10895 68 SLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSG 140 (241)
T ss_pred CCCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCH
Confidence 431 134568999999988999999999987643321 122334456688899999997765544 347999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.++++.+.|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~ 218 (241)
T PRK10895 141 GERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAH 218 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEee
Confidence 9999999999999999999999999999999999999999998877999999999986 57889999999985 899999
Q ss_pred cCC
Q 000576 1050 GPL 1052 (1412)
Q Consensus 1050 G~~ 1052 (1412)
|+.
T Consensus 219 ~~~ 221 (241)
T PRK10895 219 GTP 221 (241)
T ss_pred CCH
Confidence 885
No 197
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.8e-35 Score=329.08 Aligned_cols=217 Identities=23% Similarity=0.294 Sum_probs=172.8
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++.. .....+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKP--TSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 5789999887411 0013699999999999999999999999999999999997654 4799999998764
Q ss_pred c------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCCCC
Q 000576 895 Q------ETFARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN-LLRQALVGLPGVN 965 (1412)
Q Consensus 895 ~------~~~~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~ 965 (1412)
. ..+++.++|++|++ .+.+.+||+||+.+........ ......+...+++++.+++. ...+.. ..
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PH 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----ch
Confidence 3 23456799999998 4667899999998765433211 11111122235788889884 444443 34
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999986 56678999999985 7
Q ss_pred EEEEEc
Q 000576 1045 QEIYVG 1050 (1412)
Q Consensus 1045 ~~~y~G 1050 (1412)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 887654
No 198
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-35 Score=312.26 Aligned_cols=213 Identities=26% Similarity=0.389 Sum_probs=178.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++||+..|. +.++|++||+++++||+++|+|+|||||||||++|+|..+. .+|+|.++|.++
T Consensus 3 mL~v~~l~~~YG-------------~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~di 67 (237)
T COG0410 3 MLEVENLSAGYG-------------KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDI 67 (237)
T ss_pred ceeEEeEeeccc-------------ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeec
Confidence 378899988774 36799999999999999999999999999999999997654 379999999997
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CchhhhcccCCCCCCCCC
Q 000576 894 KQE----TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVE-LNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 894 ~~~----~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~vg~~~~~~lS 968 (1412)
+.. ..++-++||||....||.+||+|||..++..+.. ++..+..++++.+.+- |.+.++...| .||
T Consensus 68 t~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LS 138 (237)
T COG0410 68 TGLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLS 138 (237)
T ss_pred CCCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCC
Confidence 642 2455689999999999999999999987655432 1111222677777774 4455555443 699
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI 1047 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~ 1047 (1412)
|||||-++|||||+++|++|+|||||.||-|.-...|.++|+++.++ |.||+.+-+... ...+.+||.++|.+ |+++
T Consensus 139 GGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv 216 (237)
T COG0410 139 GGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIV 216 (237)
T ss_pred hHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEE
Confidence 99999999999999999999999999999999999999999999966 779999888765 47789999999985 8999
Q ss_pred EEcCC
Q 000576 1048 YVGPL 1052 (1412)
Q Consensus 1048 y~G~~ 1052 (1412)
+.|+.
T Consensus 217 ~~G~~ 221 (237)
T COG0410 217 LSGTA 221 (237)
T ss_pred EecCH
Confidence 99996
No 199
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=4.7e-35 Score=326.69 Aligned_cols=209 Identities=23% Similarity=0.302 Sum_probs=174.9
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERP--SAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 57899998873 123599999999999999999999999999999999997654 4799999998754
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 895 QE------TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 895 ~~------~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
.. .+++.++|++|++.+++..|++||+.+....+ .....+..+.++++++.+++.+..+..+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCC
Confidence 21 13567899999998888999999998865433 1233344456788999999987665543 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI 1047 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~ 1047 (1412)
||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 216 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHLH 216 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEc
Confidence 99999999999999999999999999999999999999999999777899999999987 57778999999986 6753
No 200
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-35 Score=340.18 Aligned_cols=218 Identities=25% Similarity=0.305 Sum_probs=179.5
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++|+... .....+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQP--TSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 78999999885210 0123599999999999999999999999999999999997654 4799999998763
Q ss_pred c-------ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCCCC
Q 000576 895 Q-------ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN-LLRQALVGLPGVN 965 (1412)
Q Consensus 895 ~-------~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~ 965 (1412)
. ..+++.+|||+|++. .+...||+||+.|..... ....++.++.++++++.++|. +..+.. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 1 234567999999862 233579999998875432 223444456789999999996 455543 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999764 899999999987 57888999999985 8
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999985
No 201
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.6e-35 Score=329.59 Aligned_cols=195 Identities=28% Similarity=0.410 Sum_probs=163.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-------cceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-------QRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 238 (1412)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 56999999999999999999999999999999999999887 7999999998765331 3579999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++.+||+||+.++....+... .+....++.+++.+||++..++.+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 889999999998754322100 001123566889999987666554
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++. ++|++++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKE-AGTTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEECCHHHHh-hhcEEEE
Confidence 469999999999999999999999999999999999999999999998652 3567777889888876 9999999
Q ss_pred EeCCeE
Q 000576 399 ISDGQI 404 (1412)
Q Consensus 399 L~~G~i 404 (1412)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 202
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=338.19 Aligned_cols=216 Identities=25% Similarity=0.380 Sum_probs=181.4
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++|+++.++ +++.+|+|+|++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+
T Consensus 4 ~~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p--~~G~i~i~g~~ 69 (283)
T PRK13636 4 YILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKP--SSGRILFDGKP 69 (283)
T ss_pred ceEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CccEEEECCEE
Confidence 3589999999884 123599999999999999999999999999999999997654 47999999987
Q ss_pred CCc-----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCC
Q 000576 893 KKQ-----ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNG 966 (1412)
Q Consensus 893 ~~~-----~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~ 966 (1412)
... ..+++.+||++|++. .+...||+|++.+..... ..+..+.++.++++++.+++.+..+.. .+.
T Consensus 70 ~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~ 141 (283)
T PRK13636 70 IDYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THC 141 (283)
T ss_pred CCCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----ccc
Confidence 631 234567999999864 334679999998764322 223444456789999999998776655 357
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 967 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 967 lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ ++.+.||++++|++ |+
T Consensus 142 LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~ 219 (283)
T PRK13636 142 LSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GR 219 (283)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999865 899999999987 46678999999986 79
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
+++.|+.
T Consensus 220 i~~~g~~ 226 (283)
T PRK13636 220 VILQGNP 226 (283)
T ss_pred EEEeCCH
Confidence 9999986
No 203
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=342.38 Aligned_cols=205 Identities=23% Similarity=0.352 Sum_probs=170.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCC-----------------------
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDE----------------------- 222 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----------------------- 222 (1412)
..+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+...
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999987 7999999875421
Q ss_pred ----cCccceEEEEcCCC-CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhh
Q 000576 223 ----FVPQRTAAYISQHD-VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEAS 297 (1412)
Q Consensus 223 ----~~~~~~~~yv~Q~d-~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1412)
...++.+|||+|++ ..++..||+||+.|+....+... ++..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------------------------------HHHH
Confidence 01135799999984 45567899999998754322100 0112
Q ss_pred HHHHHHHHHhCCC-ccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCC
Q 000576 298 VVTDYILKILGLD-VCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRG 376 (1412)
Q Consensus 298 ~~~~~il~~lgL~-~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~ 376 (1412)
..++.+++.+||+ +..++. +..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .+
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~--~g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK--QG 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH--CC
Confidence 2456788999996 445544 457999999999999999999999999999999999999999999999864 36
Q ss_pred eEEEEEecChhhHHhhcCeEEEEeCCeEEEecChhhHH
Q 000576 377 TTLISLLQPAPEAYDLFDDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 377 t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G~~~~~~ 414 (1412)
++|++++|+.+++.+++|+|++|++|+++++|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 77888999999999999999999999999999998875
No 204
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=6e-35 Score=333.08 Aligned_cols=214 Identities=20% Similarity=0.261 Sum_probs=180.7
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEc
Confidence 488999998874 24699999999999999999999999999999999997654 479999999865
Q ss_pred Cc----------------ccccceEEEeccCCCCCCCCCHHHHHHHHHH-hcCCCCCCHHHHHHHHHHHHHHcCCchhh-
Q 000576 894 KQ----------------ETFARISGYCEQNDIHSPQVTVYESLLYSAW-LRLSPEVDSKTRKMFIEEVMELVELNLLR- 955 (1412)
Q Consensus 894 ~~----------------~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~-lr~~~~~~~~~~~~~v~~~l~~l~l~~~~- 955 (1412)
.. ..+++.++|++|++.+++.+||+||+.+... .. .....+.++.++++++.+++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~ 146 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQ 146 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhh
Confidence 31 1335678999999999999999999987542 21 123344456788999999997653
Q ss_pred hcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhc
Q 000576 956 QALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1035 (1412)
Q Consensus 956 ~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD 1035 (1412)
+.. ...||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++.|+|||+++|+++ ++.+.||
T Consensus 147 ~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d 220 (257)
T PRK10619 147 GKY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSS 220 (257)
T ss_pred hCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcC
Confidence 432 3579999999999999999999999999999999999999999999999877999999999987 5777899
Q ss_pred cEeEEecCcEEEEEcCC
Q 000576 1036 ELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1036 ~v~ll~~gG~~~y~G~~ 1052 (1412)
++++|++ |++++.|+.
T Consensus 221 ~i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 221 HVIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEEC-CEEEEeCCH
Confidence 9999985 899999875
No 205
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=3e-35 Score=326.26 Aligned_cols=207 Identities=23% Similarity=0.338 Sum_probs=173.6
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ .+.+|+++|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 65 (213)
T cd03262 1 IEIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEP--DSGTIIIDGLKLT 65 (213)
T ss_pred CEEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECC
Confidence 35788888774 24599999999999999999999999999999999997654 4799999998763
Q ss_pred c-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 895 Q-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 895 ~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
. ..+++.++|++|++.+++.+|++||+.+...... ....++.++.++++++.+++.+..+..+ ..|||
T Consensus 66 ~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 138 (213)
T cd03262 66 DDKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSG 138 (213)
T ss_pred ccchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCH
Confidence 2 2345679999999999999999999987642111 1223344556788999999987666543 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 139 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 139 GQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999999999999999999999999999877899999999986 57788999999986 55
No 206
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.8e-35 Score=346.76 Aligned_cols=213 Identities=25% Similarity=0.322 Sum_probs=180.4
Q ss_pred cccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCc----cCCCcCc-------cc
Q 000576 159 LSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGH----NMDEFVP-------QR 227 (1412)
Q Consensus 159 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~----~~~~~~~-------~~ 227 (1412)
+.++++...+|+|+|++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+ ++..... ++
T Consensus 30 ~~~~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~ 106 (382)
T TIGR03415 30 ILDETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTH 106 (382)
T ss_pred HHHhhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcC
Confidence 345667788999999999999999999999999999999999999987 799999996 3332211 14
Q ss_pred eEEEEcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHh
Q 000576 228 TAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKIL 307 (1412)
Q Consensus 228 ~~~yv~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l 307 (1412)
.++||+|+..+++.+||+||+.|+.+..+... .+....++++++.+
T Consensus 107 ~i~~vfQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~v 152 (382)
T TIGR03415 107 RVSMVFQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELV 152 (382)
T ss_pred CEEEEECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHc
Confidence 69999999999999999999999864432110 01122456789999
Q ss_pred CCCccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChh
Q 000576 308 GLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAP 387 (1412)
Q Consensus 308 gL~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~ 387 (1412)
||++..|..++ .|||||||||+|||||+.+|+||||||||+|||+.++.++.+.|+++.+. .+++|+.++|+.+
T Consensus 153 gL~~~~~~~~~-----~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~-~~~TII~iTHdl~ 226 (382)
T TIGR03415 153 GLAQWADKKPG-----ELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAK-LNKTIIFVSHDLD 226 (382)
T ss_pred CCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHH
Confidence 99887766554 69999999999999999999999999999999999999999999998653 3567777999999
Q ss_pred hHHhhcCeEEEEeCCeEEEecChhhHH
Q 000576 388 EAYDLFDDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 388 ~~~~~~D~vivL~~G~iv~~G~~~~~~ 414 (1412)
++.+++|+|++|++|+++..|+++++.
T Consensus 227 e~~~l~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 227 EALKIGNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred HHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999998875
No 207
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=5.8e-35 Score=331.30 Aligned_cols=214 Identities=23% Similarity=0.320 Sum_probs=178.1
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEEcCc
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITISGY 891 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 891 (1412)
++++|++++++ +..+|+|+|++|++||+++|+|+||||||||+++|+|...+. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 67899998874 235899999999999999999999999999999999976432 12799999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----hhhhcccCCC
Q 000576 892 PKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN----LLRQALVGLP 962 (1412)
Q Consensus 892 ~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~vg~~ 962 (1412)
+... ...++.++|++|+..+++ .|++||+.+....+. .....+.++.++++++.+++. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 234567999999988888 999999988654431 122334455688899999997 444433
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
...||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999876 489999999987 57788999999995
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 899999875
No 208
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.1e-35 Score=334.28 Aligned_cols=214 Identities=26% Similarity=0.349 Sum_probs=172.6
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC------ccceEEEEcCCCCc
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV------PQRTAAYISQHDVH 238 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~ 238 (1412)
++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+
T Consensus 14 ~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~ 90 (243)
T TIGR02315 14 GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNL 90 (243)
T ss_pred CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcc
Confidence 456999999999999999999999999999999999999886 799999998875432 13569999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++.+||+||+.++..... ..+. ... +.. ..+....++.+++.+||++..+..
T Consensus 91 ~~~~tv~~~l~~~~~~~~--~~~~---~~~------~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~-- 142 (243)
T TIGR02315 91 IERLTVLENVLHGRLGYK--PTWR---SLL------GRF---------------SEEDKERALSALERVGLADKAYQR-- 142 (243)
T ss_pred cccccHHHHHhhcccccc--cchh---hhh------ccc---------------cHHHHHHHHHHHHHcCcHhhhcCC--
Confidence 889999999987532110 0000 000 000 001122356678899997666544
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+++|++++
T Consensus 143 ---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~tH~~~~~~~~~d~v~~ 218 (243)
T TIGR02315 143 ---ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKE-DGITVIINLHQVDLAKKYADRIVG 218 (243)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEE
Confidence 4479999999999999999999999999999999999999999999998653 356777789999999999999999
Q ss_pred EeCCeEEEecChhhH
Q 000576 399 ISDGQIVYQGPREHV 413 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~ 413 (1412)
|++|++++.|+++++
T Consensus 219 l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 219 LKAGEIVFDGAPSEL 233 (243)
T ss_pred EECCEEEecCCHHHh
Confidence 999999999988775
No 209
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=4.3e-35 Score=330.07 Aligned_cols=208 Identities=25% Similarity=0.379 Sum_probs=172.4
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc--cceEEEEcCCCCcCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP--QRTAAYISQHDVHIGE 241 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~ 241 (1412)
+++++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.
T Consensus 12 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~ 88 (236)
T TIGR03864 12 GARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLD 88 (236)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCccc
Confidence 4456999999999999999999999999999999999999887 7999999988754322 2579999999888889
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
+||+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 89 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~--- 131 (236)
T TIGR03864 89 LSVRQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAERADDKVR--- 131 (236)
T ss_pred CcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCChh---
Confidence 999999987643221100 0011234567888999877666554
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. .++++++++|+.+++.. +|++++|++
T Consensus 132 --~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~-~d~i~~l~~ 207 (236)
T TIGR03864 132 --ELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRD-QGLSVLWATHLVDEIEA-DDRLVVLHR 207 (236)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecChhhHhh-CCEEEEEeC
Confidence 69999999999999999999999999999999999999999999998653 35667778899888864 999999999
Q ss_pred CeEEEecChhhHHH
Q 000576 402 GQIVYQGPREHVLE 415 (1412)
Q Consensus 402 G~iv~~G~~~~~~~ 415 (1412)
|++++.|+.+++.+
T Consensus 208 G~i~~~~~~~~~~~ 221 (236)
T TIGR03864 208 GRVLADGAAAELRG 221 (236)
T ss_pred CeEEEeCCHHHHHH
Confidence 99999999887753
No 210
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-35 Score=375.50 Aligned_cols=225 Identities=24% Similarity=0.433 Sum_probs=187.6
Q ss_pred eeEEEeeeeEEEEEecCCCCCCCchhhHHHHHHHHHhhhhhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHH
Q 000576 118 IEVRFEHLKVEAEAYVGSRALPTFFNFCANIIEGLLNSLNILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLL 197 (1412)
Q Consensus 118 ~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~ 197 (1412)
.+|+|+|+++.+. .+++.+||+|+|++|++|+.+|||||+||||||...
T Consensus 986 G~I~~~~V~F~YP-------------------------------sRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~ 1034 (1228)
T KOG0055|consen 986 GDIEFRNVSFAYP-------------------------------TRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVIS 1034 (1228)
T ss_pred eEEEEeeeEeeCC-------------------------------CCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHH
Confidence 4699999999763 235667999999999999999999999999999999
Q ss_pred HHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHc
Q 000576 198 ALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAA 274 (1412)
Q Consensus 198 ~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 274 (1412)
+|-..++|+ +|+|.+||+++++.+. |+.+|.|+|+|.+| +.|+||||.||.+. +
T Consensus 1035 LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF-~~TIrENI~YG~~~--v----------------- 1091 (1228)
T KOG0055|consen 1035 LLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLF-NGTIRENIAYGSEE--V----------------- 1091 (1228)
T ss_pred HHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceeccCchhh-cccHHHHHhccCCC--C-----------------
Confidence 999999997 7999999999988766 47899999987766 56999999998211 1
Q ss_pred CCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCC
Q 000576 275 GIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTG 354 (1412)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsg 354 (1412)
+.++.++|+ +...+.+++. +|++++||.||+++. +||||||||++||||+++||+||||||.||+
T Consensus 1092 ------s~~eIi~Aa-----k~ANaH~FI~---sLP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSA 1156 (1228)
T KOG0055|consen 1092 ------SEEEIIEAA-----KLANAHNFIS---SLPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSA 1156 (1228)
T ss_pred ------CHHHHHHHH-----HHhhhHHHHh---cCcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchh
Confidence 122223332 2233455554 599999999999988 6999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEEecChhhHHH
Q 000576 355 LDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 355 LD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G~~~~~~~ 415 (1412)
||+++.+.+.+.|++... ++|+|+ +.|.. .+.+.+|.|+|+++|+|+++|++++++.
T Consensus 1157 LDseSErvVQeALd~a~~--gRT~Iv-IAHRL-STIqnaD~I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1157 LDSESERVVQEALDRAME--GRTTIV-IAHRL-STIQNADVIAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred hhhhhHHHHHHHHHHhhc--CCcEEE-Eecch-hhhhcCCEEEEEECCEEEecccHHHHHh
Confidence 999999999999999643 455555 55554 4567889999999999999999999975
No 211
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.4e-35 Score=328.23 Aligned_cols=198 Identities=30% Similarity=0.461 Sum_probs=167.1
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC--ccceEEEEcCCCCcCCCCCH
Q 000576 167 TILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGEMTV 244 (1412)
Q Consensus 167 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 244 (1412)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999887 799999998875421 23679999999888888999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccccc
Q 000576 245 RETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRG 324 (1412)
Q Consensus 245 ~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~ 324 (1412)
+||+.+..+..+.. ..+....++++++.+||++..+..+ ..
T Consensus 96 ~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (218)
T cd03266 96 RENLEYFAGLYGLK----------------------------------GDELTARLEELADRLGMEELLDRRV-----GG 136 (218)
T ss_pred HHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHHhhhh-----hh
Confidence 99998754322110 0011224567889999987666554 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeE
Q 000576 325 ISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQI 404 (1412)
Q Consensus 325 LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~i 404 (1412)
||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+.+++.++|+..++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA--LGKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999854 356777789999999999999999999999
Q ss_pred EEec
Q 000576 405 VYQG 408 (1412)
Q Consensus 405 v~~G 408 (1412)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 212
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=338.38 Aligned_cols=217 Identities=26% Similarity=0.352 Sum_probs=179.6
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.|+... ...+.+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQP--TEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67999999885110 0113599999999999999999999999999999999997654 4799999998864
Q ss_pred c-------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCCC
Q 000576 895 Q-------ETFARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN-LLRQALVGLPGV 964 (1412)
Q Consensus 895 ~-------~~~~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~ 964 (1412)
. ..+++.+||++|++ .++ ..||.|++.|..... ..+..+.++.+.++++.++|. +..+.. .
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLF-EETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhcc-cchHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 13456799999986 344 469999999875432 223445566788999999995 344433 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+.|+|||++||+++ ++.+.||++++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999986 57788999999985 8
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
++++.|++
T Consensus 221 ~i~~~g~~ 228 (288)
T PRK13643 221 HIISCGTP 228 (288)
T ss_pred EEEEECCH
Confidence 99999986
No 213
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-35 Score=340.21 Aligned_cols=219 Identities=24% Similarity=0.310 Sum_probs=179.8
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.|+... .....+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~ 71 (305)
T PRK13651 2 QIKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDE 71 (305)
T ss_pred EEEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceec
Confidence 378999999885210 0113599999999999999999999999999999999997654 369999998653
Q ss_pred C---------------------------cccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHH
Q 000576 894 K---------------------------QETFARISGYCEQND-IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEV 945 (1412)
Q Consensus 894 ~---------------------------~~~~~~~~~yv~Q~~-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~ 945 (1412)
. ....++.+|||+|++ ..+...||+|++.|..... ....++.+++++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~ 148 (305)
T PRK13651 72 KNKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKY 148 (305)
T ss_pred ccccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHH
Confidence 1 123456799999985 3344579999998865432 23444555678999
Q ss_pred HHHcCCc-hhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEec
Q 000576 946 MELVELN-LLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 1024 (1412)
Q Consensus 946 l~~l~l~-~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H 1024 (1412)
++.++|. +..+.. ...||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+.|+|||+++|
T Consensus 149 l~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtH 223 (305)
T PRK13651 149 IELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTH 223 (305)
T ss_pred HHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEee
Confidence 9999996 555544 3479999999999999999999999999999999999999999999999877999999999
Q ss_pred CCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 1025 QPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1025 qp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
++. .+.+.+|++++|++ |++++.|++
T Consensus 224 d~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 224 DLD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred CHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 986 57789999999985 899999986
No 214
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.9e-35 Score=331.40 Aligned_cols=207 Identities=21% Similarity=0.351 Sum_probs=173.0
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC-----ccceEEEEcCCCCc
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV-----PQRTAAYISQHDVH 238 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 238 (1412)
+++++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+
T Consensus 12 ~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 88 (240)
T PRK09493 12 GPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYL 88 (240)
T ss_pred CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEeccccc
Confidence 3456999999999999999999999999999999999999887 799999999875421 13579999999888
Q ss_pred CCCCCHHHHHHHhhhh-cCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 239 IGEMTVRETLAFSARC-QGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
++.+||+||+.++... .+.. . .+....++++++.+||++..|..+
T Consensus 89 ~~~~tv~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~ 134 (240)
T PRK09493 89 FPHLTALENVMFGPLRVRGAS----------K------------------------EEAEKQARELLAKVGLAERAHHYP 134 (240)
T ss_pred CCCCcHHHHHHhHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChHHHhcCh
Confidence 8899999999886321 1100 0 011123466888999986666544
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
+.||||||||++||+||+.+|++++|||||+|||..++..+.+.|+++++ .+++++.++|+.+++.+++|+++
T Consensus 135 -----~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~ 207 (240)
T PRK09493 135 -----SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE--EGMTMVIVTHEIGFAEKVASRLI 207 (240)
T ss_pred -----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhCCEEE
Confidence 47999999999999999999999999999999999999999999999854 35677778999999999999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000576 398 LISDGQIVYQGPREHVL 414 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~ 414 (1412)
+|++|++++.|+.+++.
T Consensus 208 ~l~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 208 FIDKGRIAEDGDPQVLI 224 (240)
T ss_pred EEECCEEEeeCCHHHHh
Confidence 99999999999988764
No 215
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-35 Score=341.54 Aligned_cols=218 Identities=23% Similarity=0.336 Sum_probs=179.6
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.|+... ...+.+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p--~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKS--KYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCEEc
Confidence 589999999885210 0123599999999999999999999999999999999997654 479999999775
Q ss_pred Cc-------------------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc
Q 000576 894 KQ-------------------ETFARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN 952 (1412)
Q Consensus 894 ~~-------------------~~~~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~ 952 (1412)
.. ..+++.+|||+|++ .+++ .||+||+.|..... ..+.++..+.++++++.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13456799999986 3554 59999998864321 223444455788999999996
Q ss_pred -hhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHH
Q 000576 953 -LLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1031 (1412)
Q Consensus 953 -~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~ 1031 (1412)
+..+.. +..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ .+.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 444433 3579999999999999999999999999999999999999999999998777999999999986 477
Q ss_pred HhhccEeEEecCcEEEEEcCC
Q 000576 1032 EAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1032 ~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
+.+|++++|++ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999985 899999985
No 216
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.4e-33 Score=375.29 Aligned_cols=134 Identities=22% Similarity=0.262 Sum_probs=107.0
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchh-hhcccCCCCCCCCCHHHHHHHHHHHHHh---hCCc
Q 000576 911 HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLL-RQALVGLPGVNGLSTEQRKRLTIAVELV---ANPS 986 (1412)
Q Consensus 911 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~~~~lSgGqrqRl~ia~~L~---~~p~ 986 (1412)
.+...||.|+|.++..-........++..+.+ ++++.++|.+. .+.. ...||||||||+.||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44578999999877542211111223334445 47888998765 4443 3479999999999999998 5999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEe-----cCcEEEEEcCC
Q 000576 987 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLK-----RGGQEIYVGPL 1052 (1412)
Q Consensus 987 illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~-----~gG~~~y~G~~ 1052 (1412)
+++|||||+|||+.+...+++.|+++++.|.|||+++|++. .+ +.+|++++|. .||+++..|++
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 99999999999999999999999999888999999999986 34 8999999995 36899999987
No 217
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=4.1e-35 Score=333.39 Aligned_cols=206 Identities=25% Similarity=0.380 Sum_probs=172.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCc-----------CccceEEEEc
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEF-----------VPQRTAAYIS 233 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----------~~~~~~~yv~ 233 (1412)
++++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++
T Consensus 15 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~ 91 (250)
T PRK11264 15 GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVF 91 (250)
T ss_pred CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEe
Confidence 346999999999999999999999999999999999999886 79999999887532 1135799999
Q ss_pred CCCCcCCCCCHHHHHHHhhhh-cCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcc
Q 000576 234 QHDVHIGEMTVRETLAFSARC-QGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVC 312 (1412)
Q Consensus 234 Q~d~~~~~lTV~e~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~ 312 (1412)
|++.+++.+||+||+.++... .+. . ..+....++.+++.+||++.
T Consensus 92 q~~~~~~~~tv~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~~l~~~gl~~~ 137 (250)
T PRK11264 92 QNFNLFPHRTVLENIIEGPVIVKGE-P---------------------------------KEEATARARELLAKVGLAGK 137 (250)
T ss_pred cCcccCCCCCHHHHHHHHHHHhcCC-C---------------------------------HHHHHHHHHHHHHHcCCcch
Confidence 998888889999999875321 110 0 00112234567888999876
Q ss_pred ccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000576 313 ADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDL 392 (1412)
Q Consensus 313 ~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~ 392 (1412)
.|+.+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+.+|+.++|+.+++.++
T Consensus 138 ~~~~~-----~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~~tH~~~~~~~~ 210 (250)
T PRK11264 138 ETSYP-----RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ--EKRTMVIVTHEMSFARDV 210 (250)
T ss_pred hhCCh-----hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHh
Confidence 66544 47999999999999999999999999999999999999999999999864 356677789999999999
Q ss_pred cCeEEEEeCCeEEEecChhhHH
Q 000576 393 FDDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 393 ~D~vivL~~G~iv~~G~~~~~~ 414 (1412)
+|++++|++|++++.|+.+++.
T Consensus 211 ~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 211 ADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred cCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999988763
No 218
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-35 Score=329.59 Aligned_cols=212 Identities=23% Similarity=0.344 Sum_probs=177.0
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRA--TSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEec
Confidence 488999998874 23599999999999999999999999999999999997654 479999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCchhhhcccCCCCCCCCC
Q 000576 894 KQE----TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELV-ELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 894 ~~~----~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~vg~~~~~~lS 968 (1412)
... ..++.++|++|+..+++.+||.||+.+..... ...+..+.++++++.+ ++.+..+.. ...||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 432 23457999999998899999999998754221 1122234466777777 465544433 34799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999998877999999999986 58889999999985 89999
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 9986
No 219
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=8.7e-35 Score=324.80 Aligned_cols=209 Identities=24% Similarity=0.356 Sum_probs=177.9
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~~~~~~ 65 (223)
T TIGR03740 1 LETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRP--TSGEIIFDGHPWT 65 (223)
T ss_pred CEEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecc
Confidence 35788887763 24699999999999999999999999999999999997653 4799999998764
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHH
Q 000576 895 QETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKR 974 (1412)
Q Consensus 895 ~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqR 974 (1412)
... .+.++|++|++.+++.+|++||+.+....+. .. +..+.++++.+++.+..+..+ ..||||||||
T Consensus 66 ~~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~r 132 (223)
T TIGR03740 66 RKD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQR 132 (223)
T ss_pred ccc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHH
Confidence 322 2468999999988899999999987654332 11 234688899999987766543 4799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCCC
Q 000576 975 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPLG 1053 (1412)
Q Consensus 975 l~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~~ 1053 (1412)
++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|++.
T Consensus 133 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 133 LGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 99999999999999999999999999999999999999877999999999987 57788999999985 8999999874
No 220
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-35 Score=303.86 Aligned_cols=216 Identities=27% Similarity=0.393 Sum_probs=181.7
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
|+.+|++|+.. .+++|++||++++|||++||+|||||||||||++|+|...+ .+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 67899999874 46799999999999999999999999999999999997654 3799999999876
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHH
Q 000576 895 Q---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQ 971 (1412)
Q Consensus 895 ~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGq 971 (1412)
+ ....+..+..+|+..+....||+|-+.++..-... .-...+..+..++++...++.+++... ...|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRD-----YRTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCchH
Confidence 4 34566778999998887778999999887432111 111123445678899999998887654 34799999
Q ss_pred HHHHHHHHHHhh------CCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 972 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 972 rqRl~ia~~L~~------~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
||||.+||.|+. ++++||||||||.||...+..++++.|++++.|..|+++.||.+. ...++|||++|++ ||
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 999999999975 346999999999999999999999999999999999999999985 5678999999995 89
Q ss_pred EEEEcCCC
Q 000576 1046 EIYVGPLG 1053 (1412)
Q Consensus 1046 ~~y~G~~~ 1053 (1412)
++..|++.
T Consensus 219 v~a~g~p~ 226 (259)
T COG4559 219 VIASGSPQ 226 (259)
T ss_pred EeecCCHH
Confidence 99999984
No 221
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-35 Score=331.52 Aligned_cols=206 Identities=21% Similarity=0.269 Sum_probs=175.8
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p--~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETP--SAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEH
Confidence 589999999884 23599999999999999999999999999999999997654 479999999765
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 894 KQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 894 ~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
. ..++.++|++|++.+++.+||+||+.+... . ..+..++++++.+++.+..+..+ ..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHH
Confidence 3 245678999999988898999999987421 0 12345788999999987665543 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ .+.+.+|++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999987 57788999999985 799988764
No 222
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3e-35 Score=326.24 Aligned_cols=209 Identities=28% Similarity=0.425 Sum_probs=169.3
Q ss_pred EeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCcc
Q 000576 817 FDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQE 896 (1412)
Q Consensus 817 ~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~ 896 (1412)
++|++++++ .+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 ~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~-- 64 (213)
T cd03235 2 VEDLTVSYG-------------GHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKP--TSGSIRVFGKPLE-- 64 (213)
T ss_pred cccceeEEC-------------CEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCccHH--
Confidence 567777663 24599999999999999999999999999999999997654 4799999998654
Q ss_pred cccceEEEeccCCCCC--CCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 897 TFARISGYCEQNDIHS--PQVTVYESLLYSAWLRLS-PEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 897 ~~~~~~~yv~Q~~~~~--~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
..++.++|++|++.+. +.+||+||+.+....... .....+..++.++++++.+++.+..+..+ ..|||||||
T Consensus 65 ~~~~~i~~v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~q 139 (213)
T cd03235 65 KERKRIGYVPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQ 139 (213)
T ss_pred HHHhheEEeccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHH
Confidence 2456789999997653 348999999875432110 00111233456889999999987666543 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ | +++.|
T Consensus 140 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 140 RVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 999999999999999999999999999999999999998877899999999987 57788999999974 4 56654
No 223
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.1e-34 Score=339.84 Aligned_cols=229 Identities=20% Similarity=0.236 Sum_probs=184.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++||+++++...........++...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 589999998885321000000001235799999999999999999999999999999999997654 479999999886
Q ss_pred Ccc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCCC
Q 000576 894 KQE------TFARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN-LLRQALVGLPGV 964 (1412)
Q Consensus 894 ~~~------~~~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~ 964 (1412)
... .+++.++||+|++ .++|.+||.|++.+...... ...+.++.++.++++++.+++. +..+.. .
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 431 2356799999997 57889999999987644321 1234455667788999999994 344443 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
..||||||||++||+||+.+|++|++||||+|||..++..|++.|+++.++ |.|||++||+++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 899999999986 57778999999985
Q ss_pred cEEEEEcCC
Q 000576 1044 GQEIYVGPL 1052 (1412)
Q Consensus 1044 G~~~y~G~~ 1052 (1412)
|+++..|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 899999986
No 224
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-35 Score=336.62 Aligned_cols=206 Identities=20% Similarity=0.300 Sum_probs=170.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC-------ccceEEEEcCCC-C
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV-------PQRTAAYISQHD-V 237 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d-~ 237 (1412)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 45999999999999999999999999999999999999987 799999999875421 245799999985 2
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC-cccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD-VCADTM 316 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 316 (1412)
.+...||+||+.|+....+... .+....++.+++.+||+ +..++.
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKMNL----------------------------------DEVKNYAHRLLMDLGFSRDVMSQS 142 (286)
T ss_pred ccchhhHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 3444699999998743221100 01122356788999996 455544
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++... .+++|++++|+.+++.+++|+|
T Consensus 143 -----~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 143 -----PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred -----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEE
Confidence 4579999999999999999999999999999999999999999999998653 4677888999999999999999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000576 397 ILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~ 414 (1412)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 217 IVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999998864
No 225
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.2e-35 Score=310.46 Aligned_cols=213 Identities=26% Similarity=0.407 Sum_probs=192.7
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.+++++|+++++ .+.+++|+||.++||+++|++|+|||||||++++|.|...+ .+|.|.++|.+.
T Consensus 2 ~L~ie~vtK~Fg-------------~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~--~~G~I~~~g~~~ 66 (300)
T COG4152 2 ALEIEGVTKSFG-------------DKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEP--TEGEITWNGGPL 66 (300)
T ss_pred ceEEecchhccC-------------ceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCc--cCceEEEcCcch
Confidence 478899988774 46799999999999999999999999999999999997664 489999999998
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 894 KQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 894 ~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
++.. +.++||.|.+.-++|.+||.|.|.|-|.|+. ++.++.++.++.+|+.+++.......+ +.||-|++|
T Consensus 67 ~~~~-~~rIGyLPEERGLy~k~tv~dql~yla~LkG---m~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQ 137 (300)
T COG4152 67 SQEI-KNRIGYLPEERGLYPKMTVEDQLKYLAELKG---MPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQ 137 (300)
T ss_pred hhhh-hhhcccChhhhccCccCcHHHHHHHHHHhcC---CcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhH
Confidence 7643 4568999999999999999999999999874 456677778999999999988776664 579999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
++.+-.+++++|++++||||.|||||.+.+.+-+.+.++++.|.|||+++|+.+ .+-++||++++|++ |+.|.+|+.
T Consensus 138 KIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 138 KIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred HHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 999999999999999999999999999999999999999999999999999987 68999999999996 799999987
No 226
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-35 Score=330.26 Aligned_cols=221 Identities=24% Similarity=0.277 Sum_probs=179.1
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 890 (1412)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14247 3 KIEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDG 69 (250)
T ss_pred eEEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECC
Confidence 478999998874 235999999999999999999999999999999999975431 3589999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCC
Q 000576 891 YPKKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGL 967 (1412)
Q Consensus 891 ~~~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~l 967 (1412)
.++.. ..+++.++|++|++.+++.+||.||+.+....+.. .....+..+.++++++.+++.+..+.... .....|
T Consensus 70 ~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~L 147 (250)
T PRK14247 70 QDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLD-APAGKL 147 (250)
T ss_pred EECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhc-CCcccC
Confidence 87642 23456789999999888999999999886543211 11223344568889999998542111111 113579
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEE
Q 000576 968 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI 1047 (1412)
Q Consensus 968 SgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~ 1047 (1412)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ .+.+.+|++++|++ |+++
T Consensus 148 SgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 224 (250)
T PRK14247 148 SGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-GQIV 224 (250)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-CeEE
Confidence 99999999999999999999999999999999999999999999864 899999999987 57788999999985 8999
Q ss_pred EEcCC
Q 000576 1048 YVGPL 1052 (1412)
Q Consensus 1048 y~G~~ 1052 (1412)
..|+.
T Consensus 225 ~~g~~ 229 (250)
T PRK14247 225 EWGPT 229 (250)
T ss_pred EECCH
Confidence 99875
No 227
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=336.58 Aligned_cols=216 Identities=23% Similarity=0.310 Sum_probs=181.6
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++.. ..+.+|+|+|++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEA--ESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 47899999988421 123599999999999999999999999999999999997654 479999999886
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQ---ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
.. ...++.+||++|++. .++..||+||+.|..... ....++.++.++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567999999973 677889999998865332 2334445567899999999987766553 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++ ..+|++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 999999999986 35 67999999985 89999
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
.|++
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 9985
No 228
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.1e-34 Score=326.66 Aligned_cols=212 Identities=28% Similarity=0.410 Sum_probs=177.1
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVA--QEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcc
Confidence 57889988773 24699999999999999999999999999999999997654 4799999998754
Q ss_pred cc--cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 895 QE--TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 895 ~~--~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
.. ...+.++|++|++.+++.+|++|++.+.+..+ .....+..+.++++++.+++.+..+..+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 21 22356899999988888999999998765432 1223334456788999999987665543 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcC
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGP 1051 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~ 1051 (1412)
||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ +|+|||+++|+++ ++ +.+|++++|++ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999875 5899999999987 34 45999999985 89998887
Q ss_pred C
Q 000576 1052 L 1052 (1412)
Q Consensus 1052 ~ 1052 (1412)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 5
No 229
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-35 Score=327.74 Aligned_cols=201 Identities=24% Similarity=0.339 Sum_probs=167.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-------cceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-------QRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 238 (1412)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999999886 8999999998765432 2469999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++.+||+||+.++....+... .+.+..++.+++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 888999999998643221100 011123566889999987666554
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
..||||||||++||+|++.+|++|+|||||+|||+.++..+.+.|+++++. ++++|+.++|+.+++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeCCHHHHHh-hCEEEE
Confidence 469999999999999999999999999999999999999999999998643 35677778899888766 589999
Q ss_pred EeCCeEEEecCh
Q 000576 399 ISDGQIVYQGPR 410 (1412)
Q Consensus 399 L~~G~iv~~G~~ 410 (1412)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999988763
No 230
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=330.59 Aligned_cols=215 Identities=21% Similarity=0.249 Sum_probs=176.4
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 890 (1412)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 589999998874 135899999999999999999999999999999999975432 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch----hhhcccCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL----LRQALVGL 961 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 961 (1412)
.++.. ...++.++|++|++.+++ +||+||+.+....... ......++.++++++.+++.+ ..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHGT--KDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87532 234567999999987774 8999999886543211 122333456788888888742 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEe
Q 000576 962 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLK 1041 (1412)
Q Consensus 962 ~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~ 1041 (1412)
.+.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 45799999999999999999999999999999999999999999999996 4799999999987 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000576 1042 RGGQEIYVGPL 1052 (1412)
Q Consensus 1042 ~gG~~~y~G~~ 1052 (1412)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 231
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=5.7e-35 Score=378.05 Aligned_cols=205 Identities=27% Similarity=0.385 Sum_probs=166.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 242 (1412)
+++|+|+|++|+|||.++|+||||||||||+|+|+|+++|+ +|+|.+||+++++..+ ++.++||+|++.+ ++.
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~l-f~g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRL-MSG 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCcc-Ccc
Confidence 45999999999999999999999999999999999999997 8999999999987654 4789999997655 567
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|++|||.++.. . +.+...+++...+ ..+.+ -.++++.||.+|+++.
T Consensus 542 TI~eNi~~~~~-~-------------------------~~e~i~~al~~a~-----l~~~i---~~lp~G~dt~ige~G~ 587 (686)
T TIGR03797 542 SIFENIAGGAP-L-------------------------TLDEAWEAARMAG-----LAEDI---RAMPMGMHTVISEGGG 587 (686)
T ss_pred cHHHHHhcCCC-C-------------------------CHHHHHHHHHHcC-----cHHHH---HhccccccccccCCCC
Confidence 99999998632 1 0111111111100 01111 1367889999998764
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
+||||||||++|||||+++|++|+||||||+||+.++.+|.+.|+++ + .|++.++|..+ ..+.+|+|++|++|
T Consensus 588 -~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~-~T~IiItHr~~-~i~~~D~Iivl~~G 660 (686)
T TIGR03797 588 -TLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----K-VTRIVIAHRLS-TIRNADRIYVLDAG 660 (686)
T ss_pred -CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----C-CeEEEEecChH-HHHcCCEEEEEECC
Confidence 79999999999999999999999999999999999999999999874 2 45565777764 45679999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
+++++|+++++.+
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999864
No 232
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=8.4e-35 Score=324.61 Aligned_cols=211 Identities=24% Similarity=0.325 Sum_probs=172.7
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNP--TSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhh
Confidence 5789999887421 1124699999999999999999999999999999999997654 4799999998754
Q ss_pred cc---c---cc-ceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCC
Q 000576 895 QE---T---FA-RISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGL 967 (1412)
Q Consensus 895 ~~---~---~~-~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~l 967 (1412)
.. . ++ +.++|++|++.+++.+||+|++.+....+. ....+..+.+.++++.+++.+..+..+ ..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 31 1 22 568999999988889999999988654331 122333456788999999987666543 479
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEE
Q 000576 968 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQE 1046 (1412)
Q Consensus 968 SgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~ 1046 (1412)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+ +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999998764 899999999986 34 55799999985 676
Q ss_pred E
Q 000576 1047 I 1047 (1412)
Q Consensus 1047 ~ 1047 (1412)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 4
No 233
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-35 Score=325.56 Aligned_cols=199 Identities=29% Similarity=0.447 Sum_probs=167.2
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC--ccceEEEEcCCCCcCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGE 241 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~ 241 (1412)
+++++|+|+|+++++| +++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.
T Consensus 11 ~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 86 (211)
T cd03264 11 GKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPN 86 (211)
T ss_pred CCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCccccc
Confidence 3456999999999999 99999999999999999999999987 899999998875432 24679999999888888
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
+||+||+.+.....+.. + .+....++.+++.+||++..|+.++
T Consensus 87 ~tv~~~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 129 (211)
T cd03264 87 FTVREFLDYIAWLKGIP-S---------------------------------KEVKARVDEVLELVNLGDRAKKKIG--- 129 (211)
T ss_pred CCHHHHHHHHHHHhCCC-H---------------------------------HHHHHHHHHHHHHCCCHHHHhCchh---
Confidence 99999998864332110 0 0011235668889999877666554
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + ++++.++|+.+++.+++|++++|++
T Consensus 130 --~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~ 204 (211)
T cd03264 130 --SLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNK 204 (211)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999853 3 6777789999999999999999999
Q ss_pred CeEEEec
Q 000576 402 GQIVYQG 408 (1412)
Q Consensus 402 G~iv~~G 408 (1412)
|++++.|
T Consensus 205 g~i~~~g 211 (211)
T cd03264 205 GKLVFEG 211 (211)
T ss_pred CEEEecC
Confidence 9998765
No 234
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-35 Score=331.96 Aligned_cols=217 Identities=23% Similarity=0.275 Sum_probs=179.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKP--TGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CcceEEECCEEC
Confidence 488999998873 24699999999999999999999999999999999997554 479999999876
Q ss_pred Ccc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC----------C--CCCHHHHHHHHHHHHHHcCCchhhhc
Q 000576 894 KQE---T-FARISGYCEQNDIHSPQVTVYESLLYSAWLRLS----------P--EVDSKTRKMFIEEVMELVELNLLRQA 957 (1412)
Q Consensus 894 ~~~---~-~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~----------~--~~~~~~~~~~v~~~l~~l~l~~~~~~ 957 (1412)
... . .+..++|++|++.+++.+||+||+.+....... . .....+..+.+++.++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233479999999999999999999886431110 0 00111233467888999999776665
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhcc
Q 000576 958 LVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1036 (1412)
Q Consensus 958 ~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~ 1036 (1412)
.+ ..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|+++ ++.+.+|+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 43 479999999999999999999999999999999999999999999999775 899999999987 57788999
Q ss_pred EeEEecCcEEEEEcCC
Q 000576 1037 LFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1037 v~ll~~gG~~~y~G~~ 1052 (1412)
+++|++ |++++.|+.
T Consensus 224 i~~l~~-g~i~~~~~~ 238 (255)
T PRK11300 224 IYVVNQ-GTPLANGTP 238 (255)
T ss_pred EEEEEC-CeEEecCCH
Confidence 999985 899999986
No 235
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.3e-34 Score=339.41 Aligned_cols=215 Identities=22% Similarity=0.248 Sum_probs=176.8
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-------cceEEEEcCCC-
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-------QRTAAYISQHD- 236 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 236 (1412)
...+|+|||++|++||+++|+|+||||||||+++|+|.++|+...+|+|.++|+++..... ++.++||+|++
T Consensus 28 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 107 (330)
T PRK09473 28 DVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPM 107 (330)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCch
Confidence 3569999999999999999999999999999999999998742237999999998865432 14699999986
Q ss_pred -CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccc
Q 000576 237 -VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADT 315 (1412)
Q Consensus 237 -~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 315 (1412)
.+.+.+||.+++.+......... ..+....+..+++.+||++..++
T Consensus 108 ~~l~p~~~v~~~i~~~~~~~~~~~---------------------------------~~~~~~~~~~~L~~vgL~~~~~~ 154 (330)
T PRK09473 108 TSLNPYMRVGEQLMEVLMLHKGMS---------------------------------KAEAFEESVRMLDAVKMPEARKR 154 (330)
T ss_pred hhcCCCCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHcCCCChHHH
Confidence 67889999999987543221000 00112245667889999764332
Q ss_pred cccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000576 316 MVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDD 395 (1412)
Q Consensus 316 ~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~ 395 (1412)
. ++.++.|||||||||+||+||+.+|++|++||||+|||..++.+|.+.|+++.+. .+++++.++|+...+.+++|+
T Consensus 155 -~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dr 231 (330)
T PRK09473 155 -M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDK 231 (330)
T ss_pred -h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCE
Confidence 2 3567789999999999999999999999999999999999999999999998663 367788899999999999999
Q ss_pred EEEEeCCeEEEecChhhHHH
Q 000576 396 IILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 396 vivL~~G~iv~~G~~~~~~~ 415 (1412)
|++|++|+|++.|+.+++.+
T Consensus 232 i~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 232 VLVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEEECCEEEEECCHHHHHh
Confidence 99999999999999998853
No 236
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-35 Score=330.56 Aligned_cols=209 Identities=19% Similarity=0.337 Sum_probs=173.2
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCCCc
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHDVH 238 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~ 238 (1412)
++++.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|+++|.++..... ++.++|++|++..
T Consensus 13 ~~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~ 89 (241)
T PRK10895 13 YKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASI 89 (241)
T ss_pred eCCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCcc
Confidence 33456999999999999999999999999999999999999887 7999999988755332 3569999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++.+||+||+.+..+...... ..+....++.+++.+||++..+..
T Consensus 90 ~~~~tv~enl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-- 134 (241)
T PRK10895 90 FRRLSVYDNLMAVLQIRDDLS---------------------------------AEQREDRANELMEEFHIEHLRDSM-- 134 (241)
T ss_pred cccCcHHHHHhhhhhcccccC---------------------------------HHHHHHHHHHHHHHcCCHHHhhcc--
Confidence 888999999987543211000 001122356688889997655544
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
.+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.++++.. .+.+++.++|+..++.+++|++++
T Consensus 135 ---~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiii~sH~~~~~~~~~d~v~~ 209 (241)
T PRK10895 135 ---GQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD--SGLGVLITDHNVRETLAVCERAYI 209 (241)
T ss_pred ---hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEEcCHHHHHHhcCEEEE
Confidence 447999999999999999999999999999999999999999999998754 356777788999999999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000576 399 ISDGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~ 414 (1412)
|++|++++.|+++++.
T Consensus 210 l~~G~i~~~~~~~~~~ 225 (241)
T PRK10895 210 VSQGHLIAHGTPTEIL 225 (241)
T ss_pred EeCCeEEeeCCHHHHh
Confidence 9999999999988764
No 237
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=8.5e-35 Score=329.45 Aligned_cols=219 Identities=23% Similarity=0.265 Sum_probs=176.1
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 67 (243)
T TIGR01978 1 LKIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLL 67 (243)
T ss_pred CeEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecC
Confidence 46789988874 24699999999999999999999999999999999997311135799999998764
Q ss_pred cc---cc-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC----CCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCCCC
Q 000576 895 QE---TF-ARISGYCEQNDIHSPQVTVYESLLYSAWLRLSP----EVDSKTRKMFIEEVMELVELN-LLRQALVGLPGVN 965 (1412)
Q Consensus 895 ~~---~~-~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~----~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~ 965 (1412)
.. .. +..++|++|++.+++.+|++|++.+........ .....+..+.++++++.+++. +..+..++ .
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 143 (243)
T TIGR01978 68 ELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----E 143 (243)
T ss_pred CCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----c
Confidence 31 12 234899999999999999999998764322110 112223345678899999996 34443321 2
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-hccEeEEecCc
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLLKRGG 1044 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~-fD~v~ll~~gG 1044 (1412)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+... +|++++|++ |
T Consensus 144 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G 221 (243)
T TIGR01978 144 GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-G 221 (243)
T ss_pred CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-C
Confidence 49999999999999999999999999999999999999999999999877899999999986 46666 799999985 8
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (243)
T TIGR01978 222 RIVKSGDV 229 (243)
T ss_pred EEEEecCH
Confidence 99999875
No 238
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-35 Score=343.54 Aligned_cols=208 Identities=27% Similarity=0.416 Sum_probs=169.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 242 (1412)
.++|+|+|+++++||.+||+|++|||||||++.|+|-++|+ +|+|+.||.++..... ++.++.++| ..|++..
T Consensus 351 ~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Q-r~hlF~~ 426 (573)
T COG4987 351 TKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQ-RVHLFSG 426 (573)
T ss_pred cchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhcc-chHHHHH
Confidence 35999999999999999999999999999999999999998 7999999999877655 468999999 4788889
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|+|+||..+.. +...++..++...-+ .+..+ .+.++..||.+|+.+.
T Consensus 427 Tlr~NL~lA~~-------------------------~AsDEel~~aL~qvg------L~~l~--~~~p~gl~t~lge~G~ 473 (573)
T COG4987 427 TLRDNLRLANP-------------------------DASDEELWAALQQVG------LEKLL--ESAPDGLNTWLGEGGR 473 (573)
T ss_pred HHHHHHhhcCC-------------------------CCCHHHHHHHHHHcC------HHHHH--HhChhhhhchhccCCC
Confidence 99999998642 222222211111000 01111 1245677899997665
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
.||||||||++|||+|++++++++|||||.|||+.|..++++.+.+.+ ++++++.++|+...+ +.||+|++|++|
T Consensus 474 -~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~---~~kTll~vTHrL~~l-e~~drIivl~~G 548 (573)
T COG4987 474 -RLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA---EGKTLLMVTHRLRGL-ERMDRIIVLDNG 548 (573)
T ss_pred -cCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh---cCCeEEEEecccccH-hhcCEEEEEECC
Confidence 699999999999999999999999999999999999999999998754 367777789988775 667999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
+++++|.+.++++
T Consensus 549 kiie~G~~~~Ll~ 561 (573)
T COG4987 549 KIIEEGTHAELLA 561 (573)
T ss_pred eeeecCCHHhhhc
Confidence 9999999999864
No 239
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-35 Score=336.83 Aligned_cols=218 Identities=22% Similarity=0.325 Sum_probs=179.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++|+... ...+.+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKP--TTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 378999999885210 0123599999999999999999999999999999999997654 479999999876
Q ss_pred Cc-------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCC
Q 000576 894 KQ-------ETFARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN-LLRQALVGLPG 963 (1412)
Q Consensus 894 ~~-------~~~~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~ 963 (1412)
.. ..+++.+|||+|++ .+++ .||.||+.|..... .....+.++.++++++.+||. +..+..
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~----- 142 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS----- 142 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----
Confidence 42 13466799999986 3444 59999998865332 223444556788999999996 555543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++
T Consensus 143 ~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~ 221 (286)
T PRK13646 143 PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE 221 (286)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999975 4899999999986 57788999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|++++.|++
T Consensus 222 -G~i~~~g~~ 230 (286)
T PRK13646 222 -GSIVSQTSP 230 (286)
T ss_pred -CEEEEECCH
Confidence 899999985
No 240
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.8e-36 Score=346.91 Aligned_cols=212 Identities=26% Similarity=0.420 Sum_probs=175.6
Q ss_pred CCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcC
Q 000576 811 EPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISG 890 (1412)
Q Consensus 811 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 890 (1412)
.+..++|+||+++|. +++++|+++||+|++||++||+|+|||||||++++|.+... .+|+|.|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 345699999999985 23469999999999999999999999999999999998654 379999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch-------hhhcccC
Q 000576 891 YPKKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL-------LRQALVG 960 (1412)
Q Consensus 891 ~~~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~vg 960 (1412)
+++++ +.+|+.+||||||..++. -||.+|+.|+. ++.+.++ |-++.+..++.+ -.++.+|
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~ee----V~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDEE----VVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHHH----HHHHHHHcCcHHHHHhccccchhhHh
Confidence 98654 567889999999777664 59999998863 3344332 344444444433 3455677
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEE
Q 000576 961 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLL 1040 (1412)
Q Consensus 961 ~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll 1040 (1412)
..|. .|||||||||+||||++++|+|+++|||||.||+.|...+++.+++. ..|+|+|++.|+.+ +.+.||+|++|
T Consensus 483 erG~-~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l~--ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERGL-MLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRLD--LLKDFDKIIVL 558 (591)
T ss_pred hccc-ccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecch--hHhcCCEEEEE
Confidence 6653 59999999999999999999999999999999999999999999994 35899999999964 68899999999
Q ss_pred ecCcEEEEEcCC
Q 000576 1041 KRGGQEIYVGPL 1052 (1412)
Q Consensus 1041 ~~gG~~~y~G~~ 1052 (1412)
++ |++...|+-
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 96 799999985
No 241
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1e-34 Score=330.25 Aligned_cols=214 Identities=23% Similarity=0.298 Sum_probs=179.6
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++||++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPI--DEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 46889998874 23599999999999999999999999999999999997654 4799999998753
Q ss_pred c----------------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcc
Q 000576 895 Q----------------ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQAL 958 (1412)
Q Consensus 895 ~----------------~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~ 958 (1412)
. ...++.++|++|++.+++..|+.||+.+..... .........+.++++++.+++.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 2 123567999999999999999999998753211 1123334455688899999998766654
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccE
Q 000576 959 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1037 (1412)
Q Consensus 959 vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v 1037 (1412)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++...+|++
T Consensus 144 -----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 -----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred -----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3479999999999999999999999999999999999999999999998764 899999999987 577889999
Q ss_pred eEEecCcEEEEEcCC
Q 000576 1038 FLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1038 ~ll~~gG~~~y~G~~ 1052 (1412)
++|++ |++++.|+.
T Consensus 218 ~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 218 CFFDK-GRIVEQGKP 231 (252)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 899998875
No 242
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.9e-35 Score=324.04 Aligned_cols=205 Identities=25% Similarity=0.378 Sum_probs=168.5
Q ss_pred EeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCc-
Q 000576 817 FDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQ- 895 (1412)
Q Consensus 817 ~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~- 895 (1412)
++|+++.++. ..+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~l~~~~~~-----------~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~ 68 (211)
T cd03225 2 LKNLSFSYPD-----------GARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGP--TSGEVLVDGKDLTKL 68 (211)
T ss_pred ceeEEEecCC-----------CCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEcccC
Confidence 5677776631 114699999999999999999999999999999999997654 47999999987542
Q ss_pred --ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 896 --ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 896 --~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
..+++.++|++|++. .++.+|++||+.+..... .......++.++++++.+++.+..+..+ ..||||||
T Consensus 69 ~~~~~~~~i~~~~q~~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~ 140 (211)
T cd03225 69 SLKELRRKVGLVFQNPDDQFFGPTVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQK 140 (211)
T ss_pred CHHHHHhhceEEecChhhhcCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHH
Confidence 234567899999874 466789999998765332 1223333456788999999976655543 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++...||++++|++|
T Consensus 141 qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 141 QRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999877999999999986 577789999999863
No 243
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=330.54 Aligned_cols=218 Identities=23% Similarity=0.288 Sum_probs=177.2
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 890 (1412)
.++++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 589999998773 235899999999999999999999999999999999975431 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++.. ..+++.++|++|++.+++ +|++||+.+....+ ....++.++.++++++.+++......... ....
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 153 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLK-SPAL 153 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhc-CChh
Confidence 87532 134567999999988877 89999998865432 12333344567889999988432111111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|++. ++.+.+|++++|++ |+
T Consensus 154 ~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 230 (258)
T PRK14268 154 SLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFLM-GE 230 (258)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999864 799999999986 57788999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
+++.|+.
T Consensus 231 i~~~~~~ 237 (258)
T PRK14268 231 LIEFGQT 237 (258)
T ss_pred EEEeCCH
Confidence 9999875
No 244
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=330.40 Aligned_cols=220 Identities=24% Similarity=0.264 Sum_probs=178.9
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 890 (1412)
.++++|++++++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 478999998874 235999999999999999999999999999999999976542 2479999999
Q ss_pred ccCC--c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchh-hhcccCCCCC
Q 000576 891 YPKK--Q---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLL-RQALVGLPGV 964 (1412)
Q Consensus 891 ~~~~--~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~~ 964 (1412)
.++. . ..+++.++|++|++.+++.+||.||+.+....+.. ....++.++.++++++.+++... .+.. . ...
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~-~~~ 147 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRL-N-DYP 147 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhh-c-cCh
Confidence 8764 1 23456799999999999999999999876543211 11223334567888999987532 1111 1 123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 224 (253)
T PRK14267 148 SNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLYL-G 224 (253)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999865 699999999987 57788999999985 8
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
++++.|+.
T Consensus 225 ~i~~~~~~ 232 (253)
T PRK14267 225 KLIEVGPT 232 (253)
T ss_pred EEEEeCCH
Confidence 99999885
No 245
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-35 Score=336.01 Aligned_cols=219 Identities=25% Similarity=0.311 Sum_probs=179.9
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++... ...+.+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 2 ~i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKP--SSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 478899998884210 0124599999999999999999999999999999999997654 479999999875
Q ss_pred Cc-------ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCCC
Q 000576 894 KQ-------ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN-LLRQALVGLPGV 964 (1412)
Q Consensus 894 ~~-------~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~ 964 (1412)
.. ...++.++|++|++. .+..+||.|++.|..... ....++..++++++++.+++. +..+..+
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~----- 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSP----- 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCc-----
Confidence 32 123457899999863 333589999998765432 123444556788999999996 5555543
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+.|.|||+++|+++ ++.+.||++++|++ |
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 479999999999999999999999999999999999999999999999777999999999986 57889999999985 8
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13641 222 KLIKHASP 229 (287)
T ss_pred EEEEeCCH
Confidence 99999985
No 246
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=328.23 Aligned_cols=214 Identities=22% Similarity=0.311 Sum_probs=179.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 66 (242)
T PRK11124 2 SIQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMP--RSGTLNIAGNHF 66 (242)
T ss_pred EEEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEec
Confidence 378899998874 23599999999999999999999999999999999997654 479999999865
Q ss_pred C---------cccccceEEEeccCCCCCCCCCHHHHHHHH-HHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCC
Q 000576 894 K---------QETFARISGYCEQNDIHSPQVTVYESLLYS-AWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPG 963 (1412)
Q Consensus 894 ~---------~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~-a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~ 963 (1412)
. ....++.++|++|++.+++.+||.||+.+. .... .....+....++++++.+++.+..+..+
T Consensus 67 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 139 (242)
T PRK11124 67 DFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP---- 139 (242)
T ss_pred ccccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh----
Confidence 2 012345789999999999999999999653 2221 1223333456788999999987666543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
..||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+
T Consensus 140 -~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~- 216 (242)
T PRK11124 140 -LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN- 216 (242)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 479999999999999999999999999999999999999999999999877999999999987 56778999999985
Q ss_pred cEEEEEcCC
Q 000576 1044 GQEIYVGPL 1052 (1412)
Q Consensus 1044 G~~~y~G~~ 1052 (1412)
|++++.|+.
T Consensus 217 g~i~~~~~~ 225 (242)
T PRK11124 217 GHIVEQGDA 225 (242)
T ss_pred CEEEEeCCH
Confidence 899999875
No 247
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-35 Score=334.37 Aligned_cols=213 Identities=22% Similarity=0.329 Sum_probs=179.0
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ +++.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRP--QKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEECC
Confidence 57889998873 123599999999999999999999999999999999997654 4799999998764
Q ss_pred c----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 895 Q----ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 895 ~----~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
. ...++.++|++|++. .++..|+.||+.+..... .....+.++.++++++.+++.+..+..+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 2 234567999999875 366789999998765332 1234444566889999999987766543 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++ +.+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999987 45 67999999985 899999
Q ss_pred cCC
Q 000576 1050 GPL 1052 (1412)
Q Consensus 1050 G~~ 1052 (1412)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 986
No 248
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.1e-34 Score=337.69 Aligned_cols=213 Identities=25% Similarity=0.432 Sum_probs=180.0
Q ss_pred CCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcC
Q 000576 811 EPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISG 890 (1412)
Q Consensus 811 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 890 (1412)
++..+..+|+++.|+. ++++++|+|++++||+++||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 4556777799999852 23799999999999999999999999999999999998764 489999999
Q ss_pred ccCC---cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhh------cccCC
Q 000576 891 YPKK---QETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQ------ALVGL 961 (1412)
Q Consensus 891 ~~~~---~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~------~~vg~ 961 (1412)
.+.. ...+++.++||+|++.+++. |++||+.++. .+.+ ++.+.++++..++.+..+ +.+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~g-TireNi~l~~-----~~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFAG-TIRENILLAR-----PDAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCccccc-cHHHHhhccC-----CcCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8754 46788999999999988775 9999998752 1222 234678888888876544 44443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEe
Q 000576 962 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLK 1041 (1412)
Q Consensus 962 ~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~ 1041 (1412)
++++|||||+|||++||||+++++++++||||++||.++++.|++.|.++++ ++||+++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 4578999999999999999999999999999999999999999999999986 599999999975 456789999998
Q ss_pred cCcEEEEEcCC
Q 000576 1042 RGGQEIYVGPL 1052 (1412)
Q Consensus 1042 ~gG~~~y~G~~ 1052 (1412)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 5 899999875
No 249
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.7e-33 Score=362.32 Aligned_cols=123 Identities=24% Similarity=0.309 Sum_probs=102.0
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchh-hhcccCCCCCCCCCHHHHHHHHHHHHHhhCC---cEEE
Q 000576 914 QVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLL-RQALVGLPGVNGLSTEQRKRLTIAVELVANP---SIIF 989 (1412)
Q Consensus 914 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p---~ill 989 (1412)
.+||.|++.|...+.. .....+.++.++|... .+.. ...||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~~---------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIPK---------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhchh---------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 3789999888654321 1124678889998753 3332 3479999999999999999999 9999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEe-----cCcEEEEEcCC
Q 000576 990 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLK-----RGGQEIYVGPL 1052 (1412)
Q Consensus 990 lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~-----~gG~~~y~G~~ 1052 (1412)
|||||+|||+.+...+++.|+++.+.|.|||+++|++. ..+.+|+++.|. +||++++.|++
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999985 346899999994 47999999986
No 250
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.8e-35 Score=316.62 Aligned_cols=190 Identities=58% Similarity=0.959 Sum_probs=162.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.|+.+ ...+.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 47899999888521 012469999999999999999999999999999999999643223589999999876
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 894 KQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 894 ~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
. ...++.++|++|++.+++.+|++||+.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 5 344567899999998899999999998643110 49999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
|++||++|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||+++|+++.++.+.+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999887799999999998744678899999998658999876
No 251
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-34 Score=318.29 Aligned_cols=196 Identities=30% Similarity=0.564 Sum_probs=163.7
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC-eEEEEEEEcCcc
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG-YVTGNITISGYP 892 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 892 (1412)
.++|+|++|.|+.+ .+++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999999643 13457999999999999999999999999999999999976522 458999999987
Q ss_pred CCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHH
Q 000576 893 KKQ--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTE 970 (1412)
Q Consensus 893 ~~~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgG 970 (1412)
... ...++.++|++|++.+++.+||+|++.+....+ .+. ....||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~-----~~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNE-----FVRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------ccc-----chhhCCHH
Confidence 643 234567999999999999999999998754211 111 13479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 971 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 971 qrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999998765 678777776654468889999999995 888876
Q ss_pred c
Q 000576 1050 G 1050 (1412)
Q Consensus 1050 G 1050 (1412)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 5
No 252
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-35 Score=334.43 Aligned_cols=215 Identities=25% Similarity=0.308 Sum_probs=181.0
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++||++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 4889999988741 123599999999999999999999999999999999997654 479999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQ---ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
.. ...++.+||++|++. .++..||.||+.+..... ....++.++.++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCH
Confidence 43 234567999999973 667789999998865432 1233444567899999999988776654 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++ +.+|++++|.+ |++++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILE 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 899999999987 34 46999999985 89999
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13635 221 EGTP 224 (279)
T ss_pred ECCH
Confidence 9986
No 253
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=333.25 Aligned_cols=215 Identities=24% Similarity=0.363 Sum_probs=180.3
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++. +..+|+|||+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (277)
T PRK13652 3 LIETRDLCYSYSG------------SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKP--TSGSVLIRGEPI 68 (277)
T ss_pred eEEEEEEEEEeCC------------CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 3788999988741 23489999999999999999999999999999999997654 479999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQ---ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
.. ...++.++|++|++. .+...||.|++.+..... ....+..++.++++++.+++.+..+..+ +.|||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 140 (277)
T PRK13652 69 TKENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSG 140 (277)
T ss_pred CcCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCH
Confidence 43 234567899999863 344679999998765322 2334444556889999999987766653 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 141 Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~ 218 (277)
T PRK13652 141 GEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVA 218 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 899999999987 57789999999985 79999
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
.|+.
T Consensus 219 ~g~~ 222 (277)
T PRK13652 219 YGTV 222 (277)
T ss_pred ECCH
Confidence 9986
No 254
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=330.14 Aligned_cols=213 Identities=26% Similarity=0.366 Sum_probs=178.6
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ ++.+|+|+|+++++|++++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p--~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSP--DSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEcc
Confidence 67899998874 24599999999999999999999999999999999997553 4799999998754
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHH
Q 000576 895 Q---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQ 971 (1412)
Q Consensus 895 ~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGq 971 (1412)
. ...++.++|++|++.+++.+||+|++.+...... ...+..++.++++++.+++.+..+..+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPHG---LSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhcccC---CCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 2234578999999888888999999987542211 112233456788999999987666553 4799999
Q ss_pred HHHHHHHHHHh------hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 972 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 972 rqRl~ia~~L~------~~p~illlDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|+++. +.|+|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999987 56899999999986 57779999999985 7
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (258)
T PRK13548 218 RLVADGTP 225 (258)
T ss_pred EEEeeCCH
Confidence 99998875
No 255
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5e-34 Score=317.57 Aligned_cols=217 Identities=23% Similarity=0.239 Sum_probs=157.8
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMT 243 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 243 (1412)
..+.++.|.|+.|-.|+..+++||||-||||||+.|+.+--. ..+.-.+-||.|+ ....+-|
T Consensus 275 ~Gk~LFvnA~L~Iv~GRRYGLVGPNG~GKTTLLkHIa~Rala-----------------IPpnIDvLlCEQE-vvad~t~ 336 (807)
T KOG0066|consen 275 QGKLLFVNASLTIVYGRRYGLVGPNGMGKTTLLKHIAARALA-----------------IPPNIDVLLCEQE-VVADSTS 336 (807)
T ss_pred ccceeeeccceEEEecceecccCCCCCchHHHHHHHHhhhcc-----------------CCCCCceEeeeee-eeecCcH
Confidence 445688999999999999999999999999999999876311 0011246678885 4444556
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCCh-------HHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccc
Q 000576 244 VRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDL-------DVFMKAAATEGQEASVVTDYILKILGLDVCADTM 316 (1412)
Q Consensus 244 V~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 316 (1412)
.-+++.-+ ...|..++.+..+++.... .+|. +.+.+..+.....++.+...||..||.+...
T Consensus 337 Ai~tvl~a-----D~kRl~lLeee~~L~~q~e---~Gd~taaErl~~v~~ELraiGA~sAEarARRILAGLGFskEM--- 405 (807)
T KOG0066|consen 337 AIDTVLKA-----DKKRLALLEEEAKLMSQIE---EGDTTAAERLKEVADELRAIGADSAEARARRILAGLGFSKEM--- 405 (807)
T ss_pred HHHHHHHh-----hHHHHHHHHHHHHHHHHHH---cCchHHHHHHHHHHHHHHHhccccchhHHHHHHhhcCCChhH---
Confidence 66666533 1245556666555554432 2332 1223333444555666778899999998543
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
-++.....|||-|-||++||||...|-+|.|||||++||-.....+-+.|+.+ +.|+++++|+.....+.|.+|
T Consensus 406 -Q~rPt~kFSGGWRMRvSLARALflEPTLLMLDEPTNHLDLNAVIWLdNYLQgW-----kKTLLIVSHDQgFLD~VCtdI 479 (807)
T KOG0066|consen 406 -QERPTTKFSGGWRMRVSLARALFLEPTLLMLDEPTNHLDLNAVIWLDNYLQGW-----KKTLLIVSHDQGFLDSVCTDI 479 (807)
T ss_pred -hcCCccccCCceeeehhHHHHHhcCceeeeecCCccccccceeeehhhHHhhh-----hheeEEEecccchHHHHHHHH
Confidence 35566679999999999999999999999999999999999988887888776 345555889999999999999
Q ss_pred EEEeCCeE-EEecChhhHHH
Q 000576 397 ILISDGQI-VYQGPREHVLE 415 (1412)
Q Consensus 397 ivL~~G~i-v~~G~~~~~~~ 415 (1412)
|-|++-++ .|.|.+.-...
T Consensus 480 IHLD~qkLhyYrGNY~~FKK 499 (807)
T KOG0066|consen 480 IHLDNQKLHYYRGNYTLFKK 499 (807)
T ss_pred hhhhhhhhhhhcchHHHHHH
Confidence 99998887 45677654433
No 256
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-35 Score=335.42 Aligned_cols=207 Identities=26% Similarity=0.362 Sum_probs=172.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCC--c---CccceEEEEcCCCC-cC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDE--F---VPQRTAAYISQHDV-HI 239 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~ 239 (1412)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 45999999999999999999999999999999999999987 7999999998741 1 12357999999853 34
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
...||+||+.++....+.. ..+....++++++.+||.+..|+.+
T Consensus 96 ~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~-- 139 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKLP----------------------------------EDEVRKRVDNALKRTGIEHLKDKPT-- 139 (283)
T ss_pred ccccHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCChhhhhCCc--
Confidence 5689999998864322110 0011224567889999987666554
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.+++|++++|
T Consensus 140 ---~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvsH~~~~~~~~~dri~~l 215 (283)
T PRK13636 140 ---HCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKE-LGLTIIIATHDIDIVPLYCDNVFVM 215 (283)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEE
Confidence 479999999999999999999999999999999999999999999998653 3567777899999999999999999
Q ss_pred eCCeEEEecChhhHHH
Q 000576 400 SDGQIVYQGPREHVLE 415 (1412)
Q Consensus 400 ~~G~iv~~G~~~~~~~ 415 (1412)
++|++++.|+++++..
T Consensus 216 ~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 216 KEGRVILQGNPKEVFA 231 (283)
T ss_pred ECCEEEEeCCHHHHhc
Confidence 9999999999988753
No 257
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=8.9e-35 Score=340.67 Aligned_cols=209 Identities=23% Similarity=0.277 Sum_probs=174.7
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc------cceEEEEcCCC--
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP------QRTAAYISQHD-- 236 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d-- 236 (1412)
...+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.+... ++.++||+|++
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~ 109 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLA 109 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchh
Confidence 356999999999999999999999999999999999999886 7999999998865432 35799999986
Q ss_pred CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC-ccccc
Q 000576 237 VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD-VCADT 315 (1412)
Q Consensus 237 ~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt 315 (1412)
.+++.+||.||+.+..+....+ .. ..+....++.+++.+||+ +..+
T Consensus 110 ~l~p~~tv~~~i~~~l~~~~~~--------~~------------------------~~~~~~~~~~~l~~vgl~~~~~~- 156 (331)
T PRK15079 110 SLNPRMTIGEIIAEPLRTYHPK--------LS------------------------RQEVKDRVKAMMLKVGLLPNLIN- 156 (331)
T ss_pred hcCCCCCHHHHHHHHHHHhccC--------CC------------------------HHHHHHHHHHHHHHcCCChHHhc-
Confidence 5788999999999865322100 00 001123456788999995 3334
Q ss_pred cccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000576 316 MVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDD 395 (1412)
Q Consensus 316 ~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~ 395 (1412)
+.+..|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+. .+++++.++|+...+.+++|+
T Consensus 157 ----~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dr 231 (331)
T PRK15079 157 ----RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDR 231 (331)
T ss_pred ----CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCE
Confidence 445579999999999999999999999999999999999999999999998653 367788899999999999999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000576 396 IILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 396 vivL~~G~iv~~G~~~~~~ 414 (1412)
|++|++|++++.|+.+++.
T Consensus 232 i~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 232 VLVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999998875
No 258
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.4e-34 Score=327.41 Aligned_cols=215 Identities=27% Similarity=0.327 Sum_probs=178.4
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRP--DEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCeecC
Confidence 67899998774 23699999999999999999999999999999999997554 4799999998754
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC--C---CCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 895 QE----TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLS--P---EVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 895 ~~----~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~--~---~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.. ..++.++|++|++.+++.+||+||+.+....... . ....+..++.++++++.+++.+..+..+ +
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----G 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 31 1234699999999999999999999876432110 0 0112233456889999999987665543 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.||++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999876 799999999987 57788999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
++..|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 9998875
No 259
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.6e-34 Score=324.95 Aligned_cols=232 Identities=24% Similarity=0.322 Sum_probs=181.7
Q ss_pred EEeeeeEEEEEecCCCCCCCchhhHHHHHHHHHhhhhhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHh
Q 000576 121 RFEHLKVEAEAYVGSRALPTFFNFCANIIEGLLNSLNILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALA 200 (1412)
Q Consensus 121 ~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~ 200 (1412)
+.+|++.++.... ..+++.+..++.+ .++++.+++|+|+|++|++|++++|+|||||||||||++|+
T Consensus 2 ~~~~~~~~~~~~~---~~~~~~~~~~~~~----------~~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~ 68 (236)
T cd03267 2 EVSNLSKSYRVYS---KEPGLIGSLKSLF----------KRKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILS 68 (236)
T ss_pred ceecchhhccCcC---CccccchhHHHHH----------hcccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHh
Confidence 4577777765432 1233333333221 24556778999999999999999999999999999999999
Q ss_pred cCCCCCCCceeEEEECCccCCCc--CccceEEEEc-CCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCC
Q 000576 201 GKLDSSLRLYGRVTYNGHNMDEF--VPQRTAAYIS-QHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIK 277 (1412)
Q Consensus 201 G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~ 277 (1412)
|.++|+ +|+|.++|++.... ..++.++|++ |++.+++.+||+||+.+.....+...
T Consensus 69 Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv~e~l~~~~~~~~~~~------------------ 127 (236)
T cd03267 69 GLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPVIDSFYLLAAIYDLPP------------------ 127 (236)
T ss_pred CCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCCCcHHHHHHHHHHHcCCCH------------------
Confidence 999887 79999999875332 1235799997 54667788999999988654322100
Q ss_pred CCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCH
Q 000576 278 PDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDS 357 (1412)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~ 357 (1412)
++....++.+++.+||++..|+.++ .||||||||++||++|+.+|++++|||||+|||+
T Consensus 128 ----------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~ 186 (236)
T cd03267 128 ----------------ARFKKRLDELSELLDLEELLDTPVR-----QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDV 186 (236)
T ss_pred ----------------HHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCH
Confidence 0111234567888999888877664 6999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEEec
Q 000576 358 STTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVYQG 408 (1412)
Q Consensus 358 ~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G 408 (1412)
.++..+.+.|+++++. ++.+|+.++|+.+++.+++|++++|.+|++++.|
T Consensus 187 ~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 187 VAQENIRNFLKEYNRE-RGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHHhc-CCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999999998653 3566777899999999999999999999998765
No 260
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8.1e-35 Score=326.71 Aligned_cols=205 Identities=25% Similarity=0.353 Sum_probs=168.8
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCCCc
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHDVH 238 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~ 238 (1412)
++++++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~ 86 (230)
T TIGR03410 10 YGQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREI 86 (230)
T ss_pred eCCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcc
Confidence 34457999999999999999999999999999999999999987 7999999988754332 3569999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhC-CCccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILG-LDVCADTMV 317 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lg-L~~~~dt~v 317 (1412)
++.+||+||+.++.+..+.. .....+.+++.++ +++..|+.
T Consensus 87 ~~~~tv~~~l~~~~~~~~~~-------------------------------------~~~~~~~~l~~~~~l~~~~~~~- 128 (230)
T TIGR03410 87 FPRLTVEENLLTGLAALPRR-------------------------------------SRKIPDEIYELFPVLKEMLGRR- 128 (230)
T ss_pred cCCCcHHHHHHHHHHhcCcc-------------------------------------hHHHHHHHHHHHHhHHHHhhCC-
Confidence 88899999998865322100 0011234455554 44434443
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
++.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++++.++|+.+++.+++|+++
T Consensus 129 ----~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~ 203 (230)
T TIGR03410 129 ----GGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYY 203 (230)
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEE
Confidence 4579999999999999999999999999999999999999999999997652 35677778999999999999999
Q ss_pred EEeCCeEEEecChhhH
Q 000576 398 LISDGQIVYQGPREHV 413 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~ 413 (1412)
+|++|++++.|+.+++
T Consensus 204 ~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 204 VMERGRVVASGAGDEL 219 (230)
T ss_pred EEECCEEEEECCHHHc
Confidence 9999999999998776
No 261
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=329.94 Aligned_cols=203 Identities=25% Similarity=0.363 Sum_probs=169.2
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMT 243 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 243 (1412)
+++.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... .+.++|++|++.+++.+|
T Consensus 12 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~t 86 (255)
T PRK11248 12 GGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRN 86 (255)
T ss_pred CCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCc
Confidence 3456999999999999999999999999999999999999887 79999999887542 346899999988888899
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccc
Q 000576 244 VRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIR 323 (1412)
Q Consensus 244 V~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 323 (1412)
|+||+.++.+..+... .+....++.+++.+||++..++.+ .
T Consensus 87 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (255)
T PRK11248 87 VQDNVAFGLQLAGVEK----------------------------------MQRLEIAHQMLKKVGLEGAEKRYI-----W 127 (255)
T ss_pred HHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----h
Confidence 9999988643221100 001123567889999987666544 4
Q ss_pred cCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe--C
Q 000576 324 GISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS--D 401 (1412)
Q Consensus 324 ~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~--~ 401 (1412)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.+++|+|++|+ +
T Consensus 128 ~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l~~~~ 206 (255)
T PRK11248 128 QLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQE-TGKQVLLITHDIEEAVFMATELVLLSPGP 206 (255)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 79999999999999999999999999999999999999999999997543 35667778999999999999999998 5
Q ss_pred CeEEEecChh
Q 000576 402 GQIVYQGPRE 411 (1412)
Q Consensus 402 G~iv~~G~~~ 411 (1412)
|+++..++.+
T Consensus 207 G~i~~~~~~~ 216 (255)
T PRK11248 207 GRVVERLPLN 216 (255)
T ss_pred cEEEEEecCC
Confidence 9999987653
No 262
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=328.07 Aligned_cols=221 Identities=24% Similarity=0.306 Sum_probs=177.5
Q ss_pred CceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--C-CeEEEEEEE
Q 000576 812 PHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT--T-GYVTGNITI 888 (1412)
Q Consensus 812 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i 888 (1412)
|..++++|++++++ .+.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.+
T Consensus 4 ~~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 70 (253)
T PRK14242 4 PPKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILL 70 (253)
T ss_pred CcEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEE
Confidence 34689999999874 1359999999999999999999999999999999999632 1 124799999
Q ss_pred cCccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCC
Q 000576 889 SGYPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPG 963 (1412)
Q Consensus 889 ~g~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~ 963 (1412)
+|.++.. ...++.++|++|++.+++ .||+||+.+....+.. ...+..++.++++++.+++.+........ .
T Consensus 71 ~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~ 146 (253)
T PRK14242 71 DGENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLHE-S 146 (253)
T ss_pred CCEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhhC-C
Confidence 9987642 133567999999988887 5999999887543321 12223345678889999885422111111 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++
T Consensus 147 ~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l~~- 223 (253)
T PRK14242 147 ALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFFYM- 223 (253)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEEEC-
Confidence 457999999999999999999999999999999999999999999999854 799999999987 57788999999985
Q ss_pred cEEEEEcCC
Q 000576 1044 GQEIYVGPL 1052 (1412)
Q Consensus 1044 G~~~y~G~~ 1052 (1412)
|+++..|+.
T Consensus 224 G~i~~~g~~ 232 (253)
T PRK14242 224 GKLIEVGPT 232 (253)
T ss_pred CEEEEeCCH
Confidence 899998875
No 263
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=331.11 Aligned_cols=220 Identities=25% Similarity=0.342 Sum_probs=181.1
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC-eEEEEEEEcCcc
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG-YVTGNITISGYP 892 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 892 (1412)
.++++||++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 588999998874 246999999999999999999999999999999999976543 136999999987
Q ss_pred CCc--------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHcCCchhhhccc
Q 000576 893 KKQ--------ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLS-----PEVDSKTRKMFIEEVMELVELNLLRQALV 959 (1412)
Q Consensus 893 ~~~--------~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~v 959 (1412)
+.. ...++.++|++|++.+++.+||+||+.+......+ .....++.+..++++++.+++.+..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 12345689999999999999999999875321100 01112234456889999999987666543
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEe
Q 000576 960 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1038 (1412)
Q Consensus 960 g~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ 1038 (1412)
..||||||||++|||+|+.+|++|+|||||+|||..++..+.+.|+++.++ |+|||+++|++. .+.+.+|+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 479999999999999999999999999999999999999999999999754 899999999986 4778899999
Q ss_pred EEecCcEEEEEcCCC
Q 000576 1039 LLKRGGQEIYVGPLG 1053 (1412)
Q Consensus 1039 ll~~gG~~~y~G~~~ 1053 (1412)
+|.+ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9985 7999998863
No 264
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-34 Score=320.04 Aligned_cols=231 Identities=24% Similarity=0.340 Sum_probs=187.7
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCC-C-CCCceeEEEECCccCCCcCc-------cceEEEEcCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD-S-SLRLYGRVTYNGHNMDEFVP-------QRTAAYISQH 235 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-~-~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 235 (1412)
...+++||||++++||+++|+|.|||||||+.++|+|+++ + ....+|+|.++|.++..... .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999998 4 33467999999998755432 2579999998
Q ss_pred C--CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccc
Q 000576 236 D--VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCA 313 (1412)
Q Consensus 236 d--~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 313 (1412)
+ .+-|.+||.+.+.-..+...... ..++....+.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 5 67888999988875543221000 0112334566789999998642
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000576 314 DTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLF 393 (1412)
Q Consensus 314 dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~ 393 (1412)
.+-+.++..|||||||||.||.||+.+|++||.||||++||..++.+|++.|+++.+ ..+++++.++|+..-+.++|
T Consensus 145 --~~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 --RRLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIA 221 (316)
T ss_pred --HHHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhc
Confidence 234677889999999999999999999999999999999999999999999999987 46888888999999999999
Q ss_pred CeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhc
Q 000576 394 DDIILISDGQIVYQGPREHVLEFFEFMGFKCPERKGVADFLQEVT 438 (1412)
Q Consensus 394 D~vivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~ 438 (1412)
|||+||..|+||+.|+.+++. ..|.+.-....+..+.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~--------~~P~HPYT~~Ll~s~P 258 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF--------KNPKHPYTRGLLNSLP 258 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh--------cCCCChHHHHHHHhCc
Confidence 999999999999999999884 3455544444444443
No 265
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-34 Score=320.75 Aligned_cols=209 Identities=25% Similarity=0.344 Sum_probs=172.2
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++ .+. .|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 1 i~~~~l~~~~~-------------~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~--~~G~i~~~g~~~~ 63 (211)
T cd03298 1 VRLDKIRFSYG-------------EQP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETP--QSGRVLINGVDVT 63 (211)
T ss_pred CEEEeEEEEeC-------------CEe--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcC
Confidence 35788888773 112 289999999999999999999999999999997654 4799999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 895 QE-TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 895 ~~-~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
.. ..++.++|++|++.+++.+|++||+.+....+. .. ....++.++++++.+++.+..+..+ ..|||||||
T Consensus 64 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 135 (211)
T cd03298 64 AAPPADRPVSMLFQENNLFAHLTVEQNVGLGLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQ 135 (211)
T ss_pred cCCHhHccEEEEecccccCCCCcHHHHHhccccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHH
Confidence 31 234679999999999999999999987543211 11 1233456889999999987766653 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
|++|||+|+.+|++|+|||||+|||+.++..+++.|+++++ .|+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 136 rv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 136 RVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 99999999999999999999999999999999999999875 4899999999986 57788999999985 7887654
No 266
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=333.47 Aligned_cols=216 Identities=26% Similarity=0.387 Sum_probs=176.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCC-CcCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHD-VHIGE 241 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 241 (1412)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 45999999999999999999999999999999999999987 8999999998865332 35799999986 36778
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
.||+||+.++.+..+... .+....++++++.+||++..++.++
T Consensus 97 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~--- 139 (279)
T PRK13635 97 ATVQDDVAFGLENIGVPR----------------------------------EEMVERVDQALRQVGMEDFLNREPH--- 139 (279)
T ss_pred ccHHHHHhhhHhhCCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCcc---
Confidence 899999998653321100 0112245678899999877766554
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++.. .+++|++++|+.+++. .+|++++|++
T Consensus 140 --~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~-~~~tilivsH~~~~~~-~~d~i~~l~~ 215 (279)
T PRK13635 140 --RLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQ-KGITVLSITHDLDEAA-QADRVIVMNK 215 (279)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc-CCCEEEEEecCHHHHH-cCCEEEEEEC
Confidence 69999999999999999999999999999999999999999999998653 3677777889888886 5999999999
Q ss_pred CeEEEecChhhHHH---HHHhcCCCCC
Q 000576 402 GQIVYQGPREHVLE---FFEFMGFKCP 425 (1412)
Q Consensus 402 G~iv~~G~~~~~~~---~f~~~G~~~p 425 (1412)
|++++.|+.+++.. .+...++.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999988753 2334444443
No 267
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-35 Score=344.28 Aligned_cols=195 Identities=23% Similarity=0.373 Sum_probs=169.6
Q ss_pred ceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCc-------CccceEEEEcCCCCcCCCCC
Q 000576 171 GVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEF-------VPQRTAAYISQHDVHIGEMT 243 (1412)
Q Consensus 171 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 243 (1412)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|+..+++++|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999987 79999999886431 12467999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccc
Q 000576 244 VRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIR 323 (1412)
Q Consensus 244 V~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 323 (1412)
|+||+.|+.+.. ....++.+++.+||++..+..+ +
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999999863200 0113456889999987766554 4
Q ss_pred cCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCe
Q 000576 324 GISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQ 403 (1412)
Q Consensus 324 ~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~ 403 (1412)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++++.++|+..++.+++|++++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLARE-INIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 79999999999999999999999999999999999999999999998653 35677779999999999999999999999
Q ss_pred EEEecChhhHH
Q 000576 404 IVYQGPREHVL 414 (1412)
Q Consensus 404 iv~~G~~~~~~ 414 (1412)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999884
No 268
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=8e-35 Score=323.13 Aligned_cols=195 Identities=24% Similarity=0.381 Sum_probs=164.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC------ccceEEEEcCCCCcC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV------PQRTAAYISQHDVHI 239 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 239 (1412)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 46999999999999999999999999999999999999887 799999999875432 235799999998889
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
+.+||+||+.++....+.. . .+....++.+++.+||++..++.+
T Consensus 91 ~~~t~~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP--P--------------------------------REIRKRVPAALELVGLSHKHRALP-- 134 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHHHHHHHcCCHHHhhCCh--
Confidence 9999999999875432110 0 011123466888899987666554
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .++++++++|+.+++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--~~~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 135 ---AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK--AGTTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred ---hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999854 3567777899999999999999999
Q ss_pred eCCeE
Q 000576 400 SDGQI 404 (1412)
Q Consensus 400 ~~G~i 404 (1412)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 269
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=326.91 Aligned_cols=219 Identities=21% Similarity=0.275 Sum_probs=176.1
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCC---CCCeEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRK---TTGYVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~---~~~~~~G~i~i~g 890 (1412)
.++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|.. .+.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 578999998873 245999999999999999999999999999999999952 2212379999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++.. ...++.++|++|++.+++ .|+.||+.+....+.. ...+..++.++++++.+++.+..+..... ...
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLKE-SAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhhC-Ccc
Confidence 87642 234567999999988776 5999999876543311 11223345678899999986422111111 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 4799999999987 57788999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 9999985
No 270
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=328.52 Aligned_cols=217 Identities=20% Similarity=0.261 Sum_probs=178.7
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 890 (1412)
.++++|++++++ .+.+|+|+|++|++||++||+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 478999999874 235999999999999999999999999999999999975432 2489999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch----hhhcccCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL----LRQALVGL 961 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 961 (1412)
.++.. ...++.++|++|+..+++.+||+||+.+....+. .......++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87531 2345679999999999999999999987654331 1123334456788899998842 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEe
Q 000576 962 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLK 1041 (1412)
Q Consensus 962 ~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~ 1041 (1412)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 357999999999999999999999999999999999999999999999864 689999999986 5778999999997
Q ss_pred c-----CcEEEEEcCC
Q 000576 1042 R-----GGQEIYVGPL 1052 (1412)
Q Consensus 1042 ~-----gG~~~y~G~~ 1052 (1412)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 2 4899999885
No 271
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=335.63 Aligned_cols=205 Identities=21% Similarity=0.330 Sum_probs=170.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCc-------CccceEEEEcCCCC-
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEF-------VPQRTAAYISQHDV- 237 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~- 237 (1412)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45999999999999999999999999999999999999987 89999999987532 11357999999852
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC-cccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD-VCADTM 316 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 316 (1412)
.+..+||+||+.|+....+.. + .+....++.+++.+||+ ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS-E---------------------------------DEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 444689999999864322110 0 01122356788999996 445544
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.++||++
T Consensus 143 ~-----~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 P-----FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEE
Confidence 4 47999999999999999999999999999999999999999999999853 3677788999999999999999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000576 397 ILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~ 414 (1412)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 272
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-35 Score=327.56 Aligned_cols=204 Identities=25% Similarity=0.411 Sum_probs=166.9
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCCCcCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHDVHIG 240 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 240 (1412)
.+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++..++
T Consensus 17 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (237)
T PRK11614 17 KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFS 93 (237)
T ss_pred CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCC
Confidence 346999999999999999999999999999999999999887 7999999998765432 356999999988888
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHh-CCCccccccccC
Q 000576 241 EMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKIL-GLDVCADTMVGD 319 (1412)
Q Consensus 241 ~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l-gL~~~~dt~vg~ 319 (1412)
.+||+||+.++..... . + + ....++.+++.+ ++.+..++.
T Consensus 94 ~~tv~~~l~~~~~~~~---~-~---~-----------------------------~~~~~~~~l~~~~~l~~~~~~~--- 134 (237)
T PRK11614 94 RMTVEENLAMGGFFAE---R-D---Q-----------------------------FQERIKWVYELFPRLHERRIQR--- 134 (237)
T ss_pred CCcHHHHHHHhhhccC---h-h---H-----------------------------HHHHHHHHHHHHHHHHHHHhCc---
Confidence 8999999988532110 0 0 0 001123345555 354433433
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
+..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+.+|+.++|+.+++.+++|++++|
T Consensus 135 --~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l 210 (237)
T PRK11614 135 --AGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE--QGMTIFLVEQNANQALKLADRGYVL 210 (237)
T ss_pred --hhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCcHHHHHhhCCEEEEE
Confidence 447999999999999999999999999999999999999999999999864 3566777899999999999999999
Q ss_pred eCCeEEEecChhhHH
Q 000576 400 SDGQIVYQGPREHVL 414 (1412)
Q Consensus 400 ~~G~iv~~G~~~~~~ 414 (1412)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 211 ENGHVVLEDTGDALL 225 (237)
T ss_pred eCCEEEeeCCHHHHh
Confidence 999999999988774
No 273
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.3e-34 Score=328.58 Aligned_cols=208 Identities=24% Similarity=0.387 Sum_probs=170.2
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCC--CCceeEEEECCccCCCc-----CccceEEEEcCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDV 237 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 237 (1412)
+..+|+|+|++|++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++.
T Consensus 13 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 92 (247)
T TIGR00972 13 EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPN 92 (247)
T ss_pred CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcc
Confidence 346999999999999999999999999999999999999863 11269999999987542 12357999999987
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC----ccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD----VCA 313 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~ 313 (1412)
+++ +||+||+.++.+..+.... .+....++.+++.+||. +..
T Consensus 93 ~~~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 138 (247)
T TIGR00972 93 PFP-MSIYDNIAYGPRLHGIKDK---------------------------------KELDEIVEESLKKAALWDEVKDRL 138 (247)
T ss_pred cCC-CCHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchhhHh
Confidence 777 9999999986543210000 01112346678889997 444
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000576 314 DTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLF 393 (1412)
Q Consensus 314 dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~ 393 (1412)
++. ++.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|+..++.+++
T Consensus 139 ~~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~ 210 (247)
T TIGR00972 139 HDS-----ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARIS 210 (247)
T ss_pred hCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhC
Confidence 443 457999999999999999999999999999999999999999999999864 3 56777899999999999
Q ss_pred CeEEEEeCCeEEEecChhhHH
Q 000576 394 DDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 394 D~vivL~~G~iv~~G~~~~~~ 414 (1412)
|++++|++|+++++|+++++.
T Consensus 211 d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 211 DRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred CEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999988764
No 274
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=329.37 Aligned_cols=216 Identities=27% Similarity=0.366 Sum_probs=179.7
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTP--QSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCcEEEECCEEhH
Confidence 68899998874 24699999999999999999999999999999999997543 4799999998753
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHh--cCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 895 Q---ETFARISGYCEQNDIHSPQVTVYESLLYSAWL--RLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 895 ~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~l--r~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
. ...++.++|++|+..+++.+|+.|++.+.... ..... .....++.++++++.+++.+..+... ..|||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 141 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGR-LSAEDNARVNQAMEQTRINHLADRRL-----TDLSG 141 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccC-CCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCH
Confidence 2 23345689999998888889999999875211 10011 11223456788999999987666543 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (255)
T PRK11231 142 GQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQ 219 (255)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEE
Confidence 9999999999999999999999999999999999999999998777899999999987 67889999999985 799999
Q ss_pred cCCC
Q 000576 1050 GPLG 1053 (1412)
Q Consensus 1050 G~~~ 1053 (1412)
|+..
T Consensus 220 ~~~~ 223 (255)
T PRK11231 220 GTPE 223 (255)
T ss_pred cCHH
Confidence 8863
No 275
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=330.54 Aligned_cols=217 Identities=28% Similarity=0.381 Sum_probs=179.8
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++ ++.+|+|+||++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPP--SEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEeh
Confidence 589999998873 24699999999999999999999999999999999997553 479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLS-PEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
.. ..+++.++|++|+..+++.+|+.||+.+....... ........++.++++++.+++.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 23456789999998888899999999875321100 00111223456788999999987666554 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|.+ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998765 899999999987 57789999999985 89999
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
.|+.
T Consensus 229 ~~~~ 232 (265)
T PRK10575 229 QGTP 232 (265)
T ss_pred ecCH
Confidence 9876
No 276
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=9.3e-35 Score=322.56 Aligned_cols=195 Identities=28% Similarity=0.416 Sum_probs=163.5
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC------ccceEEEEcCCCCc
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV------PQRTAAYISQHDVH 238 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~ 238 (1412)
++.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+
T Consensus 14 ~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~ 90 (214)
T TIGR02673 14 GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRL 90 (214)
T ss_pred CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhh
Confidence 346999999999999999999999999999999999999886 799999999876532 13579999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++.+||+||+.++....+... ...+..++.+++.+||++..++.+
T Consensus 91 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 135 (214)
T TIGR02673 91 LPDRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFP- 135 (214)
T ss_pred ccCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh-
Confidence 888999999998754321100 011123566888999986655554
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.+++|++++
T Consensus 136 ----~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~d~i~~ 209 (214)
T TIGR02673 136 ----EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK--RGTTVIVATHDLSLVDRVAHRVII 209 (214)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhcCEEEE
Confidence 46999999999999999999999999999999999999999999999754 356777789999999999999999
Q ss_pred EeCCe
Q 000576 399 ISDGQ 403 (1412)
Q Consensus 399 L~~G~ 403 (1412)
|++|+
T Consensus 210 l~~G~ 214 (214)
T TIGR02673 210 LDDGR 214 (214)
T ss_pred ecCCC
Confidence 99985
No 277
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=9.6e-35 Score=376.44 Aligned_cols=208 Identities=30% Similarity=0.492 Sum_probs=169.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 242 (1412)
+++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|.+||+++++... ++.++||+|++.+ ++.
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~l-f~~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRL-FYG 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhh-hhh
Confidence 35899999999999999999999999999999999999997 7999999999887654 4789999997654 457
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|++|||.++.. +.+.+...+++...+ ..+.+. .+++..||.+|+++.
T Consensus 554 TI~eNi~~~~~-------------------------~~~~~~i~~a~~~~~-----l~~~i~---~lp~gl~T~i~e~G~ 600 (694)
T TIGR03375 554 TLRDNIALGAP-------------------------YADDEEILRAAELAG-----VTEFVR---RHPDGLDMQIGERGR 600 (694)
T ss_pred hHHHHHhCCCC-------------------------CCCHHHHHHHHHHcC-----hHHHHH---hCcccccceecCCCC
Confidence 99999998631 111122222221111 112221 378889999998765
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
+||||||||++|||||+.+|++++||||||+||+.++..|.+.|+++.+ +.|++.++|..+ ..+.+|+|++|++|
T Consensus 601 -~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~---~~T~iiItHrl~-~~~~~D~iivl~~G 675 (694)
T TIGR03375 601 -SLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA---GKTLVLVTHRTS-LLDLVDRIIVMDNG 675 (694)
T ss_pred -CCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC---CCEEEEEecCHH-HHHhCCEEEEEeCC
Confidence 6999999999999999999999999999999999999999999998642 455565777765 55789999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
+++++|+++++++
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999999865
No 278
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1e-34 Score=333.58 Aligned_cols=235 Identities=29% Similarity=0.441 Sum_probs=191.7
Q ss_pred hcCCCCCceeEEEeeeeEEEEEecCCCCCCCchhhHHHHHHHHHhhhhhcccccccceeeeceeeEEeCCeEEEEEcCCC
Q 000576 110 RVGISMPEIEVRFEHLKVEAEAYVGSRALPTFFNFCANIIEGLLNSLNILSSRKKHITILKGVSGIIRPGRMTLLLGPPA 189 (1412)
Q Consensus 110 ~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~G 189 (1412)
+..+|-|+..+..|++++- . ...++++|+|+||.+.+|+-++|+||||
T Consensus 325 ~m~LP~P~g~L~Ve~l~~~---P-----------------------------Pg~~~pil~~isF~l~~G~~lgIIGPSg 372 (580)
T COG4618 325 RMPLPAPQGALSVERLTAA---P-----------------------------PGQKKPILKGISFALQAGEALGIIGPSG 372 (580)
T ss_pred CCCCCCCCceeeEeeeeec---C-----------------------------CCCCCcceecceeEecCCceEEEECCCC
Confidence 4556677788999988882 1 1234679999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCcc---ceEEEEcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHH
Q 000576 190 SGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQ---RTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTE 266 (1412)
Q Consensus 190 sGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~ 266 (1412)
||||||.++|.|...|. +|.|.+||-+++..++. +.+||.||+ .-++..||.|||. |+.
T Consensus 373 SGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQd-VeLF~GTIaeNIa---Rf~----------- 434 (580)
T COG4618 373 SGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQD-VELFDGTIAENIA---RFG----------- 434 (580)
T ss_pred ccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCccc-ceecCCcHHHHHH---hcc-----------
Confidence 99999999999999987 89999999999877654 789999996 5555679999995 221
Q ss_pred HHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChhhhhHHHHHHHHhCCCcEe
Q 000576 267 LARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAF 346 (1412)
Q Consensus 267 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vl 346 (1412)
++.|.+...+|+.. ..++|.++ .|++++||.||+.+. +||||||||+++||||+++|.++
T Consensus 435 -----------~~~d~~kIieAA~l-----AgvHelIl---~lP~GYdT~iG~~G~-~LSgGQRQRIaLARAlYG~P~lv 494 (580)
T COG4618 435 -----------EEADPEKVIEAARL-----AGVHELIL---RLPQGYDTRIGEGGA-TLSGGQRQRIALARALYGDPFLV 494 (580)
T ss_pred -----------ccCCHHHHHHHHHH-----cChHHHHH---hCcCCccCccCCCCC-CCCchHHHHHHHHHHHcCCCcEE
Confidence 23344444444432 23445554 499999999998776 79999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEEecChhhHHHHH
Q 000576 347 FMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVYQGPREHVLEFF 417 (1412)
Q Consensus 347 lLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G~~~~~~~~f 417 (1412)
+||||-|+||+.....+.+.+.+... . |.++++++| .+.+...+|+|++|++|++-.+|+++|++...
T Consensus 495 VLDEPNsNLD~~GE~AL~~Ai~~~k~-r-G~~vvviaH-RPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 495 VLDEPNSNLDSEGEAALAAAILAAKA-R-GGTVVVIAH-RPSALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred EecCCCCCcchhHHHHHHHHHHHHHH-c-CCEEEEEec-CHHHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 99999999999999999999998743 3 444444555 46788999999999999999999999998743
No 279
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=331.26 Aligned_cols=213 Identities=24% Similarity=0.350 Sum_probs=177.3
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRP--QKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CccEEEECCEEcc
Confidence 67899998874 23589999999999999999999999999999999997654 4799999998763
Q ss_pred c-----ccccceEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 895 Q-----ETFARISGYCEQNDIH-SPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 895 ~-----~~~~~~~~yv~Q~~~~-~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
. ...++.++|++|++.. ....|+.|++.+....+ .....+.++.++++++.+++.+..+..+ ..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCC
Confidence 1 1234678999998753 44568999998764332 1233344456788999999987666543 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999998877999999999986 57788999999985 89999
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 9975
No 280
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=328.99 Aligned_cols=195 Identities=22% Similarity=0.296 Sum_probs=165.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCCCHH
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVR 245 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 245 (1412)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+
T Consensus 25 ~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~ 99 (257)
T PRK11247 25 RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVI 99 (257)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHH
Confidence 45999999999999999999999999999999999999887 7999999976543 245799999998888889999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccC
Q 000576 246 ETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGI 325 (1412)
Q Consensus 246 e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~L 325 (1412)
||+.++... . ....++.+++.+||++..+..+ ..|
T Consensus 100 enl~~~~~~-----~-----------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~~L 134 (257)
T PRK11247 100 DNVGLGLKG-----Q-----------------------------------WRDAALQALAAVGLADRANEWP-----AAL 134 (257)
T ss_pred HHHHhcccc-----h-----------------------------------HHHHHHHHHHHcCChhHhcCCh-----hhC
Confidence 999874210 0 0012355788899987665544 479
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEE
Q 000576 326 SGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIV 405 (1412)
Q Consensus 326 SGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv 405 (1412)
||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. .+.+|++++|+..++.+++|+|++|++|+++
T Consensus 135 SgGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tviivsHd~~~~~~~~d~i~~l~~G~i~ 213 (257)
T PRK11247 135 SGGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQ-HGFTVLLVTHDVSEAVAMADRVLLIEEGKIG 213 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998653 3566777899999999999999999999999
Q ss_pred EecChh
Q 000576 406 YQGPRE 411 (1412)
Q Consensus 406 ~~G~~~ 411 (1412)
++|+.+
T Consensus 214 ~~~~~~ 219 (257)
T PRK11247 214 LDLTVD 219 (257)
T ss_pred eecccc
Confidence 988754
No 281
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=329.47 Aligned_cols=209 Identities=31% Similarity=0.480 Sum_probs=173.0
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHI 239 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~ 239 (1412)
++++.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 12 ~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (258)
T PRK13548 12 LGGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLS 88 (258)
T ss_pred eCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCC
Confidence 33456999999999999999999999999999999999999886 7999999987754322 35699999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
+.+||+||+.++....+... ++....++.+++.+||++..++.++
T Consensus 89 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 133 (258)
T PRK13548 89 FPFTVEEVVAMGRAPHGLSR----------------------------------AEDDALVAAALAQVDLAHLAGRDYP- 133 (258)
T ss_pred CCCCHHHHHHhhhcccCCCc----------------------------------HHHHHHHHHHHHHcCCHhHhcCCcc-
Confidence 88999999988642211000 0011234668889999876666554
Q ss_pred cccccCChhhhhHHHHHHHHh------CCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000576 320 EMIRGISGGQRKRVTTGEMLV------GPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLF 393 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~------~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~ 393 (1412)
.|||||||||+||+||+ .+|++|+|||||+|||+.++..+.+.|+++++. .+++|++++|+..++.+++
T Consensus 134 ----~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~ 208 (258)
T PRK13548 134 ----QLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHE-RGLAVIVVLHDLNLAARYA 208 (258)
T ss_pred ----cCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhc
Confidence 69999999999999999 599999999999999999999999999998633 3567777899999999999
Q ss_pred CeEEEEeCCeEEEecChhhHH
Q 000576 394 DDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 394 D~vivL~~G~iv~~G~~~~~~ 414 (1412)
|+|++|++|++++.|+++++.
T Consensus 209 d~i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 209 DRIVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred CEEEEEECCEEEeeCCHHHHh
Confidence 999999999999999987764
No 282
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=328.06 Aligned_cols=224 Identities=19% Similarity=0.252 Sum_probs=179.4
Q ss_pred CCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--C-CeEEEE
Q 000576 809 PFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT--T-GYVTGN 885 (1412)
Q Consensus 809 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~ 885 (1412)
|.++..++++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+
T Consensus 8 ~~~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~ 74 (260)
T PRK10744 8 ATAPSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGE 74 (260)
T ss_pred cCCCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceE
Confidence 33445689999999874 1359999999999999999999999999999999999753 1 135799
Q ss_pred EEEcCccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccC
Q 000576 886 ITISGYPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVG 960 (1412)
Q Consensus 886 i~i~g~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg 960 (1412)
|.++|.++.. ..+++.++|++|+..+++ .|++||+.+...... ..+.++.++.++++++.+++.+.......
T Consensus 75 i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 151 (260)
T PRK10744 75 ILLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLH 151 (260)
T ss_pred EEECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHh
Confidence 9999987632 234567999999988777 899999987653321 12333444568889999988431111111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEE
Q 000576 961 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLL 1040 (1412)
Q Consensus 961 ~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll 1040 (1412)
. ....||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||+++|++. ++.+.+|++++|
T Consensus 152 ~-~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l 228 (260)
T PRK10744 152 Q-SGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAFM 228 (260)
T ss_pred c-CCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEE
Confidence 1 135799999999999999999999999999999999999999999999986 4789999999986 577889999999
Q ss_pred ecCcEEEEEcCC
Q 000576 1041 KRGGQEIYVGPL 1052 (1412)
Q Consensus 1041 ~~gG~~~y~G~~ 1052 (1412)
++ |+++..|+.
T Consensus 229 ~~-G~i~~~g~~ 239 (260)
T PRK10744 229 YL-GELIEFGNT 239 (260)
T ss_pred EC-CEEEEeCCH
Confidence 85 899999875
No 283
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=6.1e-33 Score=359.19 Aligned_cols=209 Identities=28% Similarity=0.376 Sum_probs=177.0
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++||+|+|+. +.+.+|+|+|++|+|||++||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP--ESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEE
Confidence 36999999999852 224699999999999999999999999999999999997664 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh-------hcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR-------QALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~vg~~ 962 (1412)
+++ ..+++.+|||+|++.+++ -|++||+.+.. + .+ ++.++++++..++.+.. |+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 754 457788999999998876 49999997642 1 22 23467788888877543 4556544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|++++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 3679999999999999999999999999999999999999999999886 589999999985 4678999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|+++..|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 899999985
No 284
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-34 Score=327.88 Aligned_cols=224 Identities=23% Similarity=0.253 Sum_probs=181.2
Q ss_pred CCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC---CeEEEE
Q 000576 809 PFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT---GYVTGN 885 (1412)
Q Consensus 809 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~ 885 (1412)
|..+..++++|++++++ .+.+|+|+|+++++||++||+|+||||||||+++|+|...+ .+.+|+
T Consensus 15 ~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~ 81 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ 81 (267)
T ss_pred CCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE
Confidence 44455799999999874 24699999999999999999999999999999999997542 135899
Q ss_pred EEEcCccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccC
Q 000576 886 ITISGYPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVG 960 (1412)
Q Consensus 886 i~i~g~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg 960 (1412)
|.++|.+... ...++.++|++|++.+++ .||+||+.+..... ........++.++++++.+++.+..+...+
T Consensus 82 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 82 ILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred EEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 9999987642 123567899999988777 59999998764322 111233445567888999988542222222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEE
Q 000576 961 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLL 1040 (1412)
Q Consensus 961 ~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll 1040 (1412)
. ....||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++. ++.|||+++|+++ ++.+.||++++|
T Consensus 159 ~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l 235 (267)
T PRK14237 159 K-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFF 235 (267)
T ss_pred C-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEE
Confidence 2 245799999999999999999999999999999999999999999999986 4799999999987 578899999999
Q ss_pred ecCcEEEEEcCC
Q 000576 1041 KRGGQEIYVGPL 1052 (1412)
Q Consensus 1041 ~~gG~~~y~G~~ 1052 (1412)
++ |++++.|+.
T Consensus 236 ~~-G~i~~~g~~ 246 (267)
T PRK14237 236 YL-GDLIEYDKT 246 (267)
T ss_pred EC-CEEEEeCCH
Confidence 85 899999986
No 285
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.9e-34 Score=326.29 Aligned_cols=215 Identities=20% Similarity=0.325 Sum_probs=174.2
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCCCc
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHDVH 238 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~ 238 (1412)
++++++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 12 ~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~ 88 (242)
T TIGR03411 12 FDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTV 88 (242)
T ss_pred cCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEecccccc
Confidence 33456999999999999999999999999999999999999887 7999999988754332 2469999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++.+||+||+.++..... ..+... .. .. ..+....++++++.+|+++..++.++
T Consensus 89 ~~~~tv~~nl~~~~~~~~--~~~~~~------------~~-~~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~ 142 (242)
T TIGR03411 89 FENLTVFENLELALPRDK--SVFASL------------FF-RL-----------SAEEKDRIEEVLETIGLADEADRLAG 142 (242)
T ss_pred CCCCCHHHHHHHhhhccc--cccccc------------cc-cc-----------HHHHHHHHHHHHHHcCCchhhcCChh
Confidence 999999999998643110 000000 00 00 00112345678899999876665554
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.+ +.+|+.++|+.+++.++||++++
T Consensus 143 -----~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~---~~tii~~sH~~~~~~~~~d~i~~ 214 (242)
T TIGR03411 143 -----LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG---KHSVVVVEHDMEFVRSIADKVTV 214 (242)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc---CCEEEEEECCHHHHHHhCCEEEE
Confidence 6999999999999999999999999999999999999999999999854 35777789999999999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000576 399 ISDGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~ 414 (1412)
|++|+++++|+.+++.
T Consensus 215 l~~g~~~~~~~~~~~~ 230 (242)
T TIGR03411 215 LHQGSVLAEGSLDQVQ 230 (242)
T ss_pred EECCeEEeeCCHHHHh
Confidence 9999999999987763
No 286
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.5e-33 Score=318.49 Aligned_cols=170 Identities=24% Similarity=0.321 Sum_probs=134.1
Q ss_pred eEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHH
Q 000576 846 VSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQETFARISGYCEQNDIHSPQVTVYESLLYSA 925 (1412)
Q Consensus 846 vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a 925 (1412)
=.+.|+.||+++++||||-||||+.++|+|...+. +|+ .. .-.++|-||--.-..+.||++-|.-..
T Consensus 360 ~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPd--eg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~~~~ 426 (591)
T COG1245 360 EEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPD--EGS----EE-------DLKVSYKPQYISPDYDGTVEDLLRSAI 426 (591)
T ss_pred cCCeeecceEEEEECCCCcchHHHHHHHhccccCC--CCC----Cc-------cceEeecceeecCCCCCcHHHHHHHhh
Confidence 36788999999999999999999999999966543 454 11 123678888655557889998775332
Q ss_pred HhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHH
Q 000576 926 WLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1005 (1412)
Q Consensus 926 ~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i 1005 (1412)
.-+... .....++.+-|.|..+.+..+ .+|||||.|||+||.+|.++.++.+||||++.||++.+..+
T Consensus 427 ~~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~v 494 (591)
T COG1245 427 RSAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIV 494 (591)
T ss_pred hhhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHH
Confidence 221111 123467888899998888765 47999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEe
Q 000576 1006 MRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLK 1041 (1412)
Q Consensus 1006 ~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~ 1041 (1412)
-++||+... +++|.+++-||... +--..||+++..
T Consensus 495 akvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 495 AKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 999999875 48899999999763 444578887775
No 287
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=335.70 Aligned_cols=211 Identities=19% Similarity=0.282 Sum_probs=170.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCC--CCceeEEEECCccCCCc-----CccceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 238 (1412)
.++|+|+|++|++||+++|+|||||||||||++|+|..++. ...+|+|.++|+++... ..++.++||+|++..
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35899999999999999999999999999999999998631 01379999999998532 224679999998765
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
+ +.||+||+.|+....+... . +..+..++.+++.++|.+..++.++
T Consensus 175 ~-~~ti~eNi~~~~~~~~~~~-~--------------------------------~~~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 F-EMSIFDNVAYGPRNNGIND-R--------------------------------KILEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred C-CCcHHHHHHhHHHhcCCCh-H--------------------------------HHHHHHHHHHHHHcCCcchhhhhhh
Confidence 5 6899999998753321100 0 0011123456777777655556665
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
+ ....|||||||||+|||||+.+|+||+|||||+|||+.+...+.+.|+++.+ +.++++++|....+.+++|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~---~~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK---KYSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCEEEE
Confidence 4 4457999999999999999999999999999999999999999999998753 46777799999999999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000576 399 ISDGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~ 414 (1412)
|++|++++.|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999984
No 288
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-34 Score=315.73 Aligned_cols=183 Identities=44% Similarity=0.789 Sum_probs=154.5
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC--ccceEEEEcCCCCcCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV--PQRTAAYISQHDVHIGE 241 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~ 241 (1412)
+++.+|+|+|+++++|++++|+||||||||||+++|+|.++|....+|+|.++|+++.... .++.++|++|++.+++.
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 97 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPT 97 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCC
Confidence 3457999999999999999999999999999999999999831113899999999876532 24679999999889999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
+||+||+.++.+.. .++.
T Consensus 98 ~tv~~~l~~~~~~~--------------------------------------------------------------~~~~ 115 (202)
T cd03233 98 LTVRETLDFALRCK--------------------------------------------------------------GNEF 115 (202)
T ss_pred CcHHHHHhhhhhhc--------------------------------------------------------------cccc
Confidence 99999998753210 1123
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
+..||||||||++||+||+.+|++++|||||+|||+.++..+.+.++++.+..+.+++++.||+.+++.+++|++++|++
T Consensus 116 ~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~ 195 (202)
T cd03233 116 VRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE 195 (202)
T ss_pred hhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC
Confidence 34699999999999999999999999999999999999999999999986643456677677777899999999999999
Q ss_pred CeEEEec
Q 000576 402 GQIVYQG 408 (1412)
Q Consensus 402 G~iv~~G 408 (1412)
|++++.|
T Consensus 196 G~i~~~g 202 (202)
T cd03233 196 GRQIYYG 202 (202)
T ss_pred CEEEecC
Confidence 9998765
No 289
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=330.15 Aligned_cols=219 Identities=22% Similarity=0.296 Sum_probs=181.2
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++|++++++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 6 ~~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~ 70 (265)
T PRK10253 6 ARLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTP--AHGHVWLDGEH 70 (265)
T ss_pred cEEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEE
Confidence 3688999999884 24699999999999999999999999999999999997654 47999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLS-PEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
+.. ...++.++|++|++.+++..|++|++.+...-..+ .....+..++.++++++.+++.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 145 (265)
T PRK10253 71 IQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLS 145 (265)
T ss_pred hhhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCC
Confidence 542 23345689999999988899999999764211100 0001123345678899999998766654 35799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI 1047 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~ 1047 (1412)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++++|++ |+++
T Consensus 146 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~ 223 (265)
T PRK10253 146 GGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIV 223 (265)
T ss_pred hHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 899999999987 58889999999985 8999
Q ss_pred EEcCCC
Q 000576 1048 YVGPLG 1053 (1412)
Q Consensus 1048 y~G~~~ 1053 (1412)
+.|+..
T Consensus 224 ~~g~~~ 229 (265)
T PRK10253 224 AQGAPK 229 (265)
T ss_pred EeCCHH
Confidence 999863
No 290
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=342.51 Aligned_cols=201 Identities=22% Similarity=0.298 Sum_probs=173.4
Q ss_pred eeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCcc---c----ccceEEEeccCCCCC
Q 000576 840 LVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQE---T----FARISGYCEQNDIHS 912 (1412)
Q Consensus 840 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~~yv~Q~~~~~ 912 (1412)
..+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++... . .++.+||++|+..++
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p--~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~ 118 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP--TRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALM 118 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCC--CCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCC
Confidence 4589999999999999999999999999999999997654 479999999886431 1 134689999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 000576 913 PQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 992 (1412)
Q Consensus 913 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDE 992 (1412)
+.+||+||+.|....+. ...++.++.++++++.++|.+..+..+ ..||||||||++|||+|+.+|++|+|||
T Consensus 119 ~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 119 PHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999999998765432 223444567889999999988776653 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 993 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 993 PTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+++|++++|++ |+++..|+.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 9999999999999999999875 4899999999987 57789999999985 899999875
No 291
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=293.76 Aligned_cols=201 Identities=26% Similarity=0.388 Sum_probs=175.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCCCHH
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVR 245 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 245 (1412)
..+|+|+|+.|.+||.++++||||||||||||+++|+.+|. .|+|.+||++++-. ...-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gP--gaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGP--GAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCC--CccceeEeccCccchhhHHH
Confidence 34999999999999999999999999999999999999997 79999999987642 34568999999999999999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccC
Q 000576 246 ETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGI 325 (1412)
Q Consensus 246 e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~L 325 (1412)
||++|+.++.|+.+.. ...+....+..+||++..+ +++-.|
T Consensus 93 dNvafgL~l~Gi~k~~----------------------------------R~~~a~q~l~~VgL~~~~~-----~~i~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKAQ----------------------------------RREIAHQMLALVGLEGAEH-----KYIWQL 133 (259)
T ss_pred HHHHHHHHhcCCCHHH----------------------------------HHHHHHHHHHHhCcccccc-----cceEee
Confidence 9999999998864321 1234566888999987665 445579
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC--Ce
Q 000576 326 SGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD--GQ 403 (1412)
Q Consensus 326 SGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~--G~ 403 (1412)
||||||||.|||||.-+|+.|+||||+++||.-|++++.+.|-++.+. .++-+..++|+.+|+.-++++++||+. |+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~-tgk~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQE-TGKQVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHH-hCCeEEEEeccHHHHHhhhheeEEecCCCce
Confidence 999999999999999999999999999999999999999999998875 466677799999999999999999984 79
Q ss_pred EEEecChh
Q 000576 404 IVYQGPRE 411 (1412)
Q Consensus 404 iv~~G~~~ 411 (1412)
|+..=+++
T Consensus 213 vv~~~~~d 220 (259)
T COG4525 213 VVERLPLD 220 (259)
T ss_pred eeEecCCC
Confidence 98876655
No 292
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-34 Score=335.17 Aligned_cols=224 Identities=18% Similarity=0.221 Sum_probs=181.1
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC-C-eEEEEEEEcCc
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT-G-YVTGNITISGY 891 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~-~-~~~G~i~i~g~ 891 (1412)
.++++|+++.++.+ .+...+|+||||+|++||++||+|+||||||||+++|+|...+ + ..+|+|.++|.
T Consensus 3 ~L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~ 73 (326)
T PRK11022 3 LLNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQ 73 (326)
T ss_pred eEEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCE
Confidence 37899999888521 1124699999999999999999999999999999999997542 2 35799999998
Q ss_pred cCCcc---cc----cceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCC
Q 000576 892 PKKQE---TF----ARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLP 962 (1412)
Q Consensus 892 ~~~~~---~~----~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~ 962 (1412)
++... .+ ++.++|++|++ .+.|.+|+.+++........ ....++.++.+.++++.++|.+..+.+..
T Consensus 74 ~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~-- 149 (326)
T PRK11022 74 DLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDV-- 149 (326)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhC--
Confidence 86431 11 23689999997 47889999998865543221 22344556778999999999753222211
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEe
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLK 1041 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~ 1041 (1412)
....|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|+|++||+++ .+.+.+|++++|.
T Consensus 150 ~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~ 228 (326)
T PRK11022 150 YPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMY 228 (326)
T ss_pred CchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 2357999999999999999999999999999999999999999999999976 4899999999987 4678899999998
Q ss_pred cCcEEEEEcCC
Q 000576 1042 RGGQEIYVGPL 1052 (1412)
Q Consensus 1042 ~gG~~~y~G~~ 1052 (1412)
+ |+++..|+.
T Consensus 229 ~-G~ive~g~~ 238 (326)
T PRK11022 229 A-GQVVETGKA 238 (326)
T ss_pred C-CEEEEECCH
Confidence 5 899999986
No 293
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=8.1e-35 Score=378.40 Aligned_cols=206 Identities=25% Similarity=0.357 Sum_probs=166.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 242 (1412)
+++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.++ +.
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLF-EG 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhh-hc
Confidence 45999999999999999999999999999999999999997 7999999999877654 57899999976554 67
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|++|||.++.. +.+.+...+++...+ ..+.+ -.++.+.||.+|+++.
T Consensus 568 Ti~eNi~l~~~-------------------------~~~~~~i~~al~~~~-----l~~~i---~~lp~gl~t~i~e~G~ 614 (710)
T TIGR03796 568 TVRDNLTLWDP-------------------------TIPDADLVRACKDAA-----IHDVI---TSRPGGYDAELAEGGA 614 (710)
T ss_pred cHHHHhhCCCC-------------------------CCCHHHHHHHHHHhC-----CHHHH---HhCcCcccceeccCCC
Confidence 99999987521 111111212111110 11111 1377788999998764
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
+||||||||++|||||+++|++|+||||||+||+.++.+|.+.|++ . +.|+|.++|..+. ...+|+|++|++|
T Consensus 615 -~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~-~~T~IiitHrl~~-i~~~D~Iivl~~G 687 (710)
T TIGR03796 615 -NLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----R-GCTCIIVAHRLST-IRDCDEIIVLERG 687 (710)
T ss_pred -CCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----c-CCEEEEEecCHHH-HHhCCEEEEEeCC
Confidence 7999999999999999999999999999999999999999999975 2 4556657777655 4669999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
+++++|+++++++
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 294
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=4.6e-34 Score=334.84 Aligned_cols=224 Identities=20% Similarity=0.286 Sum_probs=182.8
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC-eEEEEEEEcCcc
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG-YVTGNITISGYP 892 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 892 (1412)
.++++|+++.+... ++...+|+||||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 58999999887521 12356999999999999999999999999999999999976542 137999999988
Q ss_pred CCc---cc---c-cceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCC
Q 000576 893 KKQ---ET---F-ARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPG 963 (1412)
Q Consensus 893 ~~~---~~---~-~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~ 963 (1412)
+.. .. + .+.++|++|++ .+.|.+|+.+++........ .....+..+++.++++.++|.+..+... ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~~--~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRMK--MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHhc--CC
Confidence 643 11 1 24699999997 67899999999876544322 2344455567888999999875333222 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
...||||||||++||+||+.+|++|++||||+|||..++..|++.|+++.++ |.|+|++|||++ .+.+.+|++++|++
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999999765 899999999987 46778999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|+++..|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 899999986
No 295
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=330.68 Aligned_cols=208 Identities=26% Similarity=0.377 Sum_probs=170.8
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCc-----CccceEEEEcCCCC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDV 237 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 237 (1412)
++++.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.
T Consensus 11 ~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 87 (271)
T PRK13638 11 YQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPE 87 (271)
T ss_pred cCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChh
Confidence 33456999999999999999999999999999999999999987 79999999987421 11357999999864
Q ss_pred -cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccc
Q 000576 238 -HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 316 (1412)
Q Consensus 238 -~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 316 (1412)
.+...|+.||+.+..+..+... .+....++.+++.+||++..++.
T Consensus 88 ~~~~~~~~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 133 (271)
T PRK13638 88 QQIFYTDIDSDIAFSLRNLGVPE----------------------------------AEITRRVDEALTLVDAQHFRHQP 133 (271)
T ss_pred hccccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhcCC
Confidence 3456789999988643221100 01112345688889998766655
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
+ ..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. .+++|+.++|+..++.+++|++
T Consensus 134 ~-----~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~g~tii~vtH~~~~~~~~~d~i 206 (271)
T PRK13638 134 I-----QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA--QGNHVIISSHDIDLIYEISDAV 206 (271)
T ss_pred c-----hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEE
Confidence 4 46999999999999999999999999999999999999999999999864 3567777899999999999999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000576 397 ILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~ 414 (1412)
++|++|++++.|+++++.
T Consensus 207 ~~l~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 207 YVLRQGQILTHGAPGEVF 224 (271)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 296
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.2e-34 Score=328.35 Aligned_cols=223 Identities=24% Similarity=0.314 Sum_probs=179.0
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++||++.++.....+ ..+.+.+|+|+|++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKP--AQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 68899998874210000 00135699999999999999999999999999999999997654 4799999998764
Q ss_pred cc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCCCC
Q 000576 895 QE------TFARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN-LLRQALVGLPGVN 965 (1412)
Q Consensus 895 ~~------~~~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~ 965 (1412)
.. ..++.++|++|++ .+.+.+||+|++.+..... ........++.++++++.+++. ...+.. ..
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 31 1345799999986 4667899999997654321 1122233445688999999995 455543 34
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999986 57778999999985 8
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99999986
No 297
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.8e-34 Score=342.54 Aligned_cols=208 Identities=23% Similarity=0.401 Sum_probs=174.3
Q ss_pred ccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCc-------CccceEEEE
Q 000576 160 SSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEF-------VPQRTAAYI 232 (1412)
Q Consensus 160 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv 232 (1412)
+++++++. + |+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|+
T Consensus 6 ~~~~~~~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v 80 (354)
T TIGR02142 6 SKRLGDFS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYV 80 (354)
T ss_pred EEEECCEE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEE
Confidence 33444444 4 999999999999999999999999999999999987 79999999887532 124679999
Q ss_pred cCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcc
Q 000576 233 SQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVC 312 (1412)
Q Consensus 233 ~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~ 312 (1412)
+|++.+++.+||+||+.|+.+.... .+....++++++.+||++.
T Consensus 81 ~q~~~l~~~~tv~enl~~~~~~~~~------------------------------------~~~~~~~~~~l~~~gL~~~ 124 (354)
T TIGR02142 81 FQEARLFPHLSVRGNLRYGMKRARP------------------------------------SERRISFERVIELLGIGHL 124 (354)
T ss_pred ecCCccCCCCcHHHHHHHHhhccCh------------------------------------hHHHHHHHHHHHHcCChhH
Confidence 9999899999999999986432100 0011235678899999877
Q ss_pred ccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000576 313 ADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDL 392 (1412)
Q Consensus 313 ~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~ 392 (1412)
.|+.+ ..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .++++++++|+.+++..+
T Consensus 125 ~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiiivtH~~~~~~~~ 198 (354)
T TIGR02142 125 LGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAE-FGIPILYVSHSLQEVLRL 198 (354)
T ss_pred hcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHh
Confidence 76554 469999999999999999999999999999999999999999999998653 356777789999999999
Q ss_pred cCeEEEEeCCeEEEecChhhHH
Q 000576 393 FDDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 393 ~D~vivL~~G~iv~~G~~~~~~ 414 (1412)
+|++++|++|+++..|+++++.
T Consensus 199 ~d~i~~l~~G~i~~~g~~~~~~ 220 (354)
T TIGR02142 199 ADRVVVLEDGRVAAAGPIAEVW 220 (354)
T ss_pred CCEEEEEeCCEEEEECCHHHHh
Confidence 9999999999999999988874
No 298
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.6e-34 Score=322.33 Aligned_cols=197 Identities=24% Similarity=0.338 Sum_probs=164.9
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC------ccceEEEEcCCCCc
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV------PQRTAAYISQHDVH 238 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~ 238 (1412)
++++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+
T Consensus 14 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~ 90 (222)
T PRK10908 14 GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHL 90 (222)
T ss_pred CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccc
Confidence 346999999999999999999999999999999999999887 799999998875432 13579999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++.+||+||+.+.....+... ++....++.+++.+||++..++.+
T Consensus 91 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 135 (222)
T PRK10908 91 LMDRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNFP- 135 (222)
T ss_pred cccccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-
Confidence 889999999988653321100 011123456788899987665544
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .++++++++|+.+++..++|+|++
T Consensus 136 ----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~ 209 (222)
T PRK10908 136 ----IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR--VGVTVLMATHDIGLISRRSYRMLT 209 (222)
T ss_pred ----hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEE
Confidence 47999999999999999999999999999999999999999999999854 356777799999999999999999
Q ss_pred EeCCeEE
Q 000576 399 ISDGQIV 405 (1412)
Q Consensus 399 L~~G~iv 405 (1412)
|++|+++
T Consensus 210 l~~G~i~ 216 (222)
T PRK10908 210 LSDGHLH 216 (222)
T ss_pred EECCEEc
Confidence 9999985
No 299
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.9e-34 Score=323.39 Aligned_cols=201 Identities=26% Similarity=0.341 Sum_probs=163.2
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC------ccceEEEEcCCC--Cc
Q 000576 167 TILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV------PQRTAAYISQHD--VH 238 (1412)
Q Consensus 167 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 238 (1412)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999999887 799999999876533 235799999987 45
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC-ccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD-VCADTMV 317 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~v 317 (1412)
.+.+||+||+.+.....+..... .......+.+++.+|+. ...+..
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 142 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSKK--------------------------------EARKEAVLLLLVGVGLPEEVLNRY- 142 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcHH--------------------------------HHHHHHHHHHHHHCCCChhHhhCC-
Confidence 67899999998864332110000 00011124577888885 344444
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.+++|+++
T Consensus 143 ----~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 143 ----PHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEE-LGLTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEE
Confidence 4479999999999999999999999999999999999999999999998653 25677778999999999999999
Q ss_pred EEeCCeEEEec
Q 000576 398 LISDGQIVYQG 408 (1412)
Q Consensus 398 vL~~G~iv~~G 408 (1412)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 300
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-34 Score=324.55 Aligned_cols=220 Identities=20% Similarity=0.283 Sum_probs=178.4
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--CC-eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT--TG-YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 890 (1412)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 478999998874 2359999999999999999999999999999999999753 21 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++.. ..+++.++|++|+..+++.+|++||+.+...... .....+.++.++++++.+++......... ....
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcC
Confidence 87632 2346679999999999999999999987543321 11223334567888999998642111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ ++.+.||++++|.+ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999975 689999999987 57789999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 9999985
No 301
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=331.75 Aligned_cols=204 Identities=25% Similarity=0.401 Sum_probs=170.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCCC-cCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHDV-HIG 240 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~-~~~ 240 (1412)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFV 91 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcc
Confidence 45999999999999999999999999999999999999886 7999999998754321 357999999864 467
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000576 241 EMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 320 (1412)
Q Consensus 241 ~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 320 (1412)
..||+||+.|+.+..+.. + .+....++.+++.+||++..++.+
T Consensus 92 ~~tv~enl~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gl~~~~~~~~--- 134 (274)
T PRK13644 92 GRTVEEDLAFGPENLCLP-P---------------------------------IEIRKRVDRALAEIGLEKYRHRSP--- 134 (274)
T ss_pred cchHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCHHHhcCCc---
Confidence 789999999865332110 0 011223566888999987766655
Q ss_pred ccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe
Q 000576 321 MIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS 400 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~ 400 (1412)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+++|++++|+..++ ..+|++++|+
T Consensus 135 --~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~~tH~~~~~-~~~d~v~~l~ 209 (274)
T PRK13644 135 --KTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE--KGKTIVYITHNLEEL-HDADRIIVMD 209 (274)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHH-hhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999864 367777789999888 5699999999
Q ss_pred CCeEEEecChhhHH
Q 000576 401 DGQIVYQGPREHVL 414 (1412)
Q Consensus 401 ~G~iv~~G~~~~~~ 414 (1412)
+|++++.|+.+++.
T Consensus 210 ~G~i~~~g~~~~~~ 223 (274)
T PRK13644 210 RGKIVLEGEPENVL 223 (274)
T ss_pred CCEEEEECCHHHHh
Confidence 99999999988764
No 302
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-34 Score=329.46 Aligned_cols=215 Identities=24% Similarity=0.319 Sum_probs=179.7
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKP--QSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEec
Confidence 5899999988741 124589999999999999999999999999999999997654 479999999886
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQ---ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
.. ..+++.++|++|++. .++.+||+||+.+..... ....++.+..++++++.+++.+..+..+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 234567999999974 567789999998764322 1223344556889999999987766654 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++ ++|||+++|+++. + ..+|++++|++ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998766 5999999999873 4 47999999985 89999
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 303
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=331.66 Aligned_cols=206 Identities=23% Similarity=0.340 Sum_probs=172.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCC-cCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDV-HIGE 241 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 241 (1412)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+..
T Consensus 17 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 93 (277)
T PRK13652 17 KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFS 93 (277)
T ss_pred CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCccccccc
Confidence 35999999999999999999999999999999999999987 8999999998754322 356899999853 3557
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
.||+||+.++....+.. ..+....++.+++.+||.+..++.++
T Consensus 94 ~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~--- 136 (277)
T PRK13652 94 PTVEQDIAFGPINLGLD----------------------------------EETVAHRVSSALHMLGLEELRDRVPH--- 136 (277)
T ss_pred ccHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCCcc---
Confidence 89999998764322110 00112235678999999877766554
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+++|++++|++
T Consensus 137 --~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~ 213 (277)
T PRK13652 137 --HLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDK 213 (277)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 69999999999999999999999999999999999999999999998653 356777789999999999999999999
Q ss_pred CeEEEecChhhHH
Q 000576 402 GQIVYQGPREHVL 414 (1412)
Q Consensus 402 G~iv~~G~~~~~~ 414 (1412)
|++++.|+++++.
T Consensus 214 G~i~~~g~~~~~~ 226 (277)
T PRK13652 214 GRIVAYGTVEEIF 226 (277)
T ss_pred CeEEEECCHHHHh
Confidence 9999999998875
No 304
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.9e-34 Score=328.09 Aligned_cols=208 Identities=24% Similarity=0.346 Sum_probs=173.2
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC----------------ccc
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV----------------PQR 227 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----------------~~~ 227 (1412)
+++++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (252)
T TIGR03005 11 GILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRN 87 (252)
T ss_pred CCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhh
Confidence 3456999999999999999999999999999999999999886 799999998775321 145
Q ss_pred eEEEEcCCCCcCCCCCHHHHHHHhhhh-cCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHH
Q 000576 228 TAAYISQHDVHIGEMTVRETLAFSARC-QGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKI 306 (1412)
Q Consensus 228 ~~~yv~Q~d~~~~~lTV~e~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 306 (1412)
.++|++|++.+++.+||+||+.++... .+.. . .+....++.+++.
T Consensus 88 ~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~ 133 (252)
T TIGR03005 88 KIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMA----------R------------------------AEAEKRAMELLDM 133 (252)
T ss_pred CeEEEecCcccCCCCcHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHH
Confidence 799999998888899999999875321 0000 0 0011234567889
Q ss_pred hCCCccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCh
Q 000576 307 LGLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPA 386 (1412)
Q Consensus 307 lgL~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~ 386 (1412)
+|+++..+.. +..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++++.++|+.
T Consensus 134 ~gl~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~ 207 (252)
T TIGR03005 134 VGLADKADHM-----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEM 207 (252)
T ss_pred cCChhHhhcC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCH
Confidence 9998766544 4479999999999999999999999999999999999999999999998653 367777799999
Q ss_pred hhHHhhcCeEEEEeCCeEEEecChhhHH
Q 000576 387 PEAYDLFDDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 387 ~~~~~~~D~vivL~~G~iv~~G~~~~~~ 414 (1412)
+++.+++|++++|++|++++.|+.+++.
T Consensus 208 ~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 208 GFAREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999988764
No 305
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=326.90 Aligned_cols=214 Identities=23% Similarity=0.305 Sum_probs=171.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCC--CCceeEEEECCccCCCcC---ccceEEEEcCCCCcC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRLYGRVTYNGHNMDEFV---PQRTAAYISQHDVHI 239 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~ 239 (1412)
++++|+|+|++|++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~ 94 (250)
T PRK14247 15 QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPI 94 (250)
T ss_pred CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccC
Confidence 356999999999999999999999999999999999998741 113799999999875432 235799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
+.+||+||+.++.+..+.... ..+....++.+++.+||.+..+.. -+
T Consensus 95 ~~~tv~enl~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-~~ 141 (250)
T PRK14247 95 PNLSIFENVALGLKLNRLVKS--------------------------------KKELQERVRWALEKAQLWDEVKDR-LD 141 (250)
T ss_pred CCCcHHHHHHHHHHhccccCC--------------------------------HHHHHHHHHHHHHHcCCCcchhhh-hc
Confidence 899999999986532210000 001112345678888886421111 12
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
..+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +++++.++|+.+++.+++|++++|
T Consensus 142 ~~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~i~~l 218 (250)
T PRK14247 142 APAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK---DMTIVLVTHFPQQAARISDYVAFL 218 (250)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEEEEE
Confidence 34457999999999999999999999999999999999999999999999742 467777899999999999999999
Q ss_pred eCCeEEEecChhhHH
Q 000576 400 SDGQIVYQGPREHVL 414 (1412)
Q Consensus 400 ~~G~iv~~G~~~~~~ 414 (1412)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 219 YKGQIVEWGPTREVF 233 (250)
T ss_pred ECCeEEEECCHHHHH
Confidence 999999999988764
No 306
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-34 Score=331.33 Aligned_cols=218 Identities=24% Similarity=0.330 Sum_probs=176.8
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++... ...+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i 71 (280)
T PRK13649 2 GINLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVP--TQGSVRVDDTLI 71 (280)
T ss_pred eEEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEc
Confidence 378899998874210 0013599999999999999999999999999999999997654 479999999875
Q ss_pred Cc-------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch-hhhcccCCCC
Q 000576 894 KQ-------ETFARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL-LRQALVGLPG 963 (1412)
Q Consensus 894 ~~-------~~~~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~ 963 (1412)
.. ..+++.++|++|++ .+++ .||+||+.+..... ....++.++.++++++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 142 (280)
T PRK13649 72 TSTSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN----- 142 (280)
T ss_pred cccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----
Confidence 42 22456789999986 3444 69999998764332 1223344456788999999963 44443
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|+++ ++.+.+|++++|++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~- 220 (280)
T PRK13649 143 PFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK- 220 (280)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-
Confidence 3479999999999999999999999999999999999999999999999777899999999986 57788999999985
Q ss_pred cEEEEEcCC
Q 000576 1044 GQEIYVGPL 1052 (1412)
Q Consensus 1044 G~~~y~G~~ 1052 (1412)
|++++.|+.
T Consensus 221 G~i~~~g~~ 229 (280)
T PRK13649 221 GKLVLSGKP 229 (280)
T ss_pred CEEEEeCCH
Confidence 899998875
No 307
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=4.4e-34 Score=320.31 Aligned_cols=213 Identities=24% Similarity=0.347 Sum_probs=175.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++.. .....+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDG--SSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCeeEEECCEEc
Confidence 58899999887421 0113599999999999999999999999999999999997654 479999999876
Q ss_pred Cccc------c-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCC
Q 000576 894 KQET------F-ARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNG 966 (1412)
Q Consensus 894 ~~~~------~-~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~ 966 (1412)
.... . ++.++|++|++.+++.+|+.||+.+....+. ....+.++.++++++.+++.+..+..+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 4311 1 2468999999988899999999987654321 223344567889999999987666543 47
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 967 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 967 lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|+++ .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998754 899999999987 34 56999999985 78
Q ss_pred EEE
Q 000576 1046 EIY 1048 (1412)
Q Consensus 1046 ~~y 1048 (1412)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 764
No 308
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=328.11 Aligned_cols=211 Identities=21% Similarity=0.296 Sum_probs=167.3
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCC--CceeEEEECCccCCCcC-----ccceEEEEcCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL--RLYGRVTYNGHNMDEFV-----PQRTAAYISQHDV 237 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~ 237 (1412)
++.+|+|+|++|++||+++|+|||||||||||++|+|.+++.. ..+|+|.++|+++.... .++.++|++|++.
T Consensus 24 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 103 (258)
T PRK14268 24 EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPN 103 (258)
T ss_pred CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCc
Confidence 3459999999999999999999999999999999999987510 13799999998874321 2356999999877
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
+++ +||+||+.|+.+..+... .+....++.+++.+|+....+...
T Consensus 104 ~~~-~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK14268 104 PFP-MSIYDNVAYGPRIHGANK----------------------------------KDLDGVVENALRSAALWDETSDRL 148 (258)
T ss_pred cCc-ccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcchhhhh
Confidence 776 899999998753321100 001123456778888742111111
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
++.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +++|+.++|+.+++.+++|+++
T Consensus 149 -~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~---~~tiiivsH~~~~~~~~~d~i~ 224 (258)
T PRK14268 149 -KSPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK---DYTIVIVTHNMQQAARISDYTG 224 (258)
T ss_pred -cCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh---CCEEEEEECCHHHHHHhCCEEE
Confidence 233457999999999999999999999999999999999999999999999743 4677778999999999999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000576 398 LISDGQIVYQGPREHVL 414 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~ 414 (1412)
+|++|++++.|+++++.
T Consensus 225 ~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 225 FFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999988763
No 309
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-34 Score=327.91 Aligned_cols=220 Identities=24% Similarity=0.277 Sum_probs=177.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC---CeEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT---GYVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 890 (1412)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 689999999874 24599999999999999999999999999999999996542 12579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++.. ..+++.++|++|++.+++. ||.||+.+....+.. .....+..+.++++++.+++.+....... ....
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLH-EPGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87642 2345678999999887775 999999887543321 11223334567889999998642111111 1135
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|++ |+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 239 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFHL-GN 239 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 789999999987 57788999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
++..|+.
T Consensus 240 i~~~g~~ 246 (267)
T PRK14235 240 LVEVGDT 246 (267)
T ss_pred EEEeCCH
Confidence 9999875
No 310
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-34 Score=329.89 Aligned_cols=214 Identities=27% Similarity=0.350 Sum_probs=178.4
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++ +.+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKP--TSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEECc
Confidence 67899998873 123589999999999999999999999999999999997654 4799999998763
Q ss_pred c-----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 895 Q-----ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 895 ~-----~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
. ...++.++|++|++. .+...||.|++.+..... ....++..+.+.++++.+++.+..+..+ ..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 123567999999863 334579999998754321 1233444556889999999987776653 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.||++++|++ |++++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 57778999999986 89999
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 9985
No 311
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.1e-34 Score=321.64 Aligned_cols=200 Identities=25% Similarity=0.345 Sum_probs=169.4
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 242 (1412)
++++++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .+.++|++|++..++.+
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~ 85 (223)
T TIGR03740 10 FGKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENL 85 (223)
T ss_pred ECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccC
Confidence 34457999999999999999999999999999999999999887 899999998765322 35799999998888889
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
||+||+.+.....+. .+..++.+++.+||++..|..+
T Consensus 86 t~~~~~~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~----- 122 (223)
T TIGR03740 86 TARENLKVHTTLLGL--------------------------------------PDSRIDEVLNIVDLTNTGKKKA----- 122 (223)
T ss_pred CHHHHHHHHHHHcCC--------------------------------------CHHHHHHHHHHcCCcHHHhhhH-----
Confidence 999999876432210 0012355788899987666554
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
..||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .+.+|+.++|+..++.+++|++++|++|
T Consensus 123 ~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~~g 200 (223)
T TIGR03740 123 KQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE--QGITVILSSHILSEVQQLADHIGIISEG 200 (223)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHhcCEEEEEeCC
Confidence 46999999999999999999999999999999999999999999999854 3566777889999999999999999999
Q ss_pred eEEEecChh
Q 000576 403 QIVYQGPRE 411 (1412)
Q Consensus 403 ~iv~~G~~~ 411 (1412)
++++.|++.
T Consensus 201 ~i~~~~~~~ 209 (223)
T TIGR03740 201 VLGYQGKIN 209 (223)
T ss_pred EEEEecChh
Confidence 999999864
No 312
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.4e-34 Score=322.90 Aligned_cols=210 Identities=25% Similarity=0.316 Sum_probs=173.4
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++||++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 65 (230)
T TIGR03410 1 LEVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPV--KSGSIRLDGEDIT 65 (230)
T ss_pred CEEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 46788888774 24699999999999999999999999999999999997654 4799999998754
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CchhhhcccCCCCCCCCCH
Q 000576 895 QE----TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVE-LNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 895 ~~----~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~vg~~~~~~lSg 969 (1412)
.. ..++.++|++|+..+++.+|+.|++.+....+. .. ..+..+++++.++ +.+..+.. ...|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~ 134 (230)
T TIGR03410 66 KLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSG 134 (230)
T ss_pred CCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCH
Confidence 31 124568999999999999999999987654321 11 1223567777776 44444443 347999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |+++.
T Consensus 135 G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~ 212 (230)
T TIGR03410 135 GQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVA 212 (230)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998864 899999999986 57778999999985 89999
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
.|+.
T Consensus 213 ~~~~ 216 (230)
T TIGR03410 213 SGAG 216 (230)
T ss_pred ECCH
Confidence 9986
No 313
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=329.02 Aligned_cols=205 Identities=27% Similarity=0.371 Sum_probs=169.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC---ccceEEEEcCCCC-cCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV---PQRTAAYISQHDV-HIGE 241 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 241 (1412)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 45899999999999999999999999999999999999987 799999999875432 2457999999863 6778
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
+||+||+.++....+.. ..+....++++++.+||++..++.+
T Consensus 99 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~---- 140 (271)
T PRK13632 99 ATVEDDIAFGLENKKVP----------------------------------PKKMKDIIDDLAKKVGMEDYLDKEP---- 140 (271)
T ss_pred ccHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHhhCCc----
Confidence 99999998864321100 0011224567889999987766655
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++. ++++|++++|+.+++. .+|++++|++
T Consensus 141 -~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~ 217 (271)
T PRK13632 141 -QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSE 217 (271)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEEC
Confidence 479999999999999999999999999999999999999999999998653 3466776888888775 7999999999
Q ss_pred CeEEEecChhhHH
Q 000576 402 GQIVYQGPREHVL 414 (1412)
Q Consensus 402 G~iv~~G~~~~~~ 414 (1412)
|+++..|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 314
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.6e-34 Score=320.06 Aligned_cols=194 Identities=27% Similarity=0.433 Sum_probs=161.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCC-cCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDV-HIGE 241 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 241 (1412)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 57999999999999999999999999999999999999887 7999999988754321 357999999864 4678
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
+||+||+.++....+... .+.....+.+++.+||++..++.+
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 999999988643211000 001123456788899986665544
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ .+++|+.++|+.+++.+++|+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--~~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA--EGKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999999865 256777799999999999999999999
Q ss_pred Ce
Q 000576 402 GQ 403 (1412)
Q Consensus 402 G~ 403 (1412)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 315
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=328.16 Aligned_cols=222 Identities=20% Similarity=0.273 Sum_probs=174.3
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc----cceEEEEcCCCCcCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQHDVHIG 240 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 240 (1412)
++++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++
T Consensus 17 ~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (255)
T PRK11300 17 GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFR 93 (255)
T ss_pred CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCC
Confidence 456999999999999999999999999999999999999987 7999999998764332 235899999999999
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000576 241 EMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 320 (1412)
Q Consensus 241 ~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 320 (1412)
.+||+||+.++....... +...... + .+..+ ....+....++.+++.+||++..++.+
T Consensus 94 ~~tv~enl~~~~~~~~~~---~~~~~~~------~-~~~~~---------~~~~~~~~~~~~~l~~~gl~~~~~~~~--- 151 (255)
T PRK11300 94 EMTVIENLLVAQHQQLKT---GLFSGLL------K-TPAFR---------RAESEALDRAATWLERVGLLEHANRQA--- 151 (255)
T ss_pred CCcHHHHHHHhhhccccc---hhhhhhc------c-ccccc---------cchhHHHHHHHHHHHhCChhhhhhCCh---
Confidence 999999999864311000 0000000 0 00000 000011234566788999986666554
Q ss_pred ccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe
Q 000576 321 MIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS 400 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~ 400 (1412)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+++|++++|+
T Consensus 152 --~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~ 228 (255)
T PRK11300 152 --GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNE-HNVTVLLIEHDMKLVMGISDRIYVVN 228 (255)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 469999999999999999999999999999999999999999999998653 35677778999999999999999999
Q ss_pred CCeEEEecChhhHH
Q 000576 401 DGQIVYQGPREHVL 414 (1412)
Q Consensus 401 ~G~iv~~G~~~~~~ 414 (1412)
+|++++.|+++++.
T Consensus 229 ~g~i~~~~~~~~~~ 242 (255)
T PRK11300 229 QGTPLANGTPEEIR 242 (255)
T ss_pred CCeEEecCCHHHHh
Confidence 99999999988763
No 316
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.5e-34 Score=327.78 Aligned_cols=216 Identities=28% Similarity=0.402 Sum_probs=178.4
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRP--DAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEEcc
Confidence 57889998774 24699999999999999999999999999999999997654 4799999998754
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHH-hcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHH
Q 000576 895 Q---ETFARISGYCEQNDIHSPQVTVYESLLYSAW-LRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTE 970 (1412)
Q Consensus 895 ~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~-lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgG 970 (1412)
. ...++.++|++|++.+++.+||+||+.+... .+........+..+.++++++.+++.+..+..+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 3 2234568999999877888999999987521 110000111223456788999999977666543 479999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 971 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 971 qrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999987 57789999999985 7999998
Q ss_pred CC
Q 000576 1051 PL 1052 (1412)
Q Consensus 1051 ~~ 1052 (1412)
+.
T Consensus 220 ~~ 221 (256)
T TIGR03873 220 PP 221 (256)
T ss_pred CH
Confidence 86
No 317
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.3e-34 Score=374.29 Aligned_cols=206 Identities=24% Similarity=0.405 Sum_probs=164.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 242 (1412)
+++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|.+||+++++... ++.++||+|++. +++.
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~-lF~g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPV-LFSG 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCcc-cccc
Confidence 46899999999999999999999999999999999999997 7999999999877654 478999999765 4568
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|+||||.++.... +.+...++....+ . +..++ .+++..||.+|+++.
T Consensus 570 TIreNI~~g~~~~-------------------------~~e~i~~al~~a~-----l-~~~i~--~lp~GldT~ige~G~ 616 (711)
T TIGR00958 570 SVRENIAYGLTDT-------------------------PDEEIMAAAKAAN-----A-HDFIM--EFPNGYDTEVGEKGS 616 (711)
T ss_pred CHHHHHhcCCCCC-------------------------CHHHHHHHHHHcC-----C-HHHHH--hCCCccCCcccCCCC
Confidence 9999999863210 1111111111100 0 11112 367788999998754
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
.||||||||++||||++++|+|++||||||+||+.++..|.+ ... .+++|++.++|..+. .+.+|+|++|++|
T Consensus 617 -~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~----~~~~TvIiItHrl~~-i~~aD~IivL~~G 689 (711)
T TIGR00958 617 -QLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS----RASRTVLLIAHRLST-VERADQILVLKKG 689 (711)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc----cCCCeEEEEeccHHH-HHhCCEEEEEECC
Confidence 799999999999999999999999999999999999998887 221 245667768888754 5679999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
+++++|+++++.+
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999864
No 318
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.2e-34 Score=367.00 Aligned_cols=206 Identities=22% Similarity=0.292 Sum_probs=166.1
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCCC
Q 000576 167 TILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMT 243 (1412)
Q Consensus 167 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 243 (1412)
++|+|+|++++|||.++|+|+||||||||+++|+|+++|+ +|+|.+||+++++..+ ++.++||+|++.+|+ .|
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~-~T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLA-DT 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCcccc-ch
Confidence 5899999999999999999999999999999999999997 7999999999877654 478999999876655 59
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccc
Q 000576 244 VRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIR 323 (1412)
Q Consensus 244 V~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 323 (1412)
++|||.++... ..+.+. +++...+ .+..++ .|++..||.+|+.+.
T Consensus 431 i~~NI~~~~~~-----~d~~i~---------------------~a~~~~g------l~~~i~--~lp~Gldt~i~e~g~- 475 (592)
T PRK10790 431 FLANVTLGRDI-----SEEQVW---------------------QALETVQ------LAELAR--SLPDGLYTPLGEQGN- 475 (592)
T ss_pred HHHHHHhCCCC-----CHHHHH---------------------HHHHHcC------cHHHHH--hccccccccccCCCC-
Confidence 99999986310 001111 1110000 011122 267788999998665
Q ss_pred cCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCe
Q 000576 324 GISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQ 403 (1412)
Q Consensus 324 ~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~ 403 (1412)
.||||||||++|||||+.+|+|++||||||+||+.++.+|.+.|+++.. ++|++.++|.. +....+|+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~---~~tvIivtHr~-~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE---HTTLVVIAHRL-STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC---CCEEEEEecch-HHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998643 34555567766 4566799999999999
Q ss_pred EEEecChhhHHH
Q 000576 404 IVYQGPREHVLE 415 (1412)
Q Consensus 404 iv~~G~~~~~~~ 415 (1412)
++..|+++++.+
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 319
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=328.08 Aligned_cols=206 Identities=24% Similarity=0.334 Sum_probs=171.2
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCc----------------Cccce
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEF----------------VPQRT 228 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----------------~~~~~ 228 (1412)
++++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.
T Consensus 17 ~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (257)
T PRK10619 17 EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTR 93 (257)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhc
Confidence 456999999999999999999999999999999999999886 79999999876421 11357
Q ss_pred EEEEcCCCCcCCCCCHHHHHHHhhh-hcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHh
Q 000576 229 AAYISQHDVHIGEMTVRETLAFSAR-CQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKIL 307 (1412)
Q Consensus 229 ~~yv~Q~d~~~~~lTV~e~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l 307 (1412)
++|++|++.+++.+||+||+.++.. ..+.. ..+....+.++++.+
T Consensus 94 i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~ 139 (257)
T PRK10619 94 LTMVFQHFNLWSHMTVLENVMEAPIQVLGLS----------------------------------KQEARERAVKYLAKV 139 (257)
T ss_pred eEEEecCcccCCCCcHHHHHHHHHHHhCCCC----------------------------------HHHHHHHHHHHHHHc
Confidence 9999999888888999999987532 11100 001122345688999
Q ss_pred CCCccc-cccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCh
Q 000576 308 GLDVCA-DTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPA 386 (1412)
Q Consensus 308 gL~~~~-dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~ 386 (1412)
||++.. + +.+..||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++++ .+.+|+.++|+.
T Consensus 140 gl~~~~~~-----~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~g~tiiivsH~~ 212 (257)
T PRK10619 140 GIDERAQG-----KYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE--EGKTMVVVTHEM 212 (257)
T ss_pred CCChhhhh-----CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCH
Confidence 997643 3 33457999999999999999999999999999999999999999999999864 367777789999
Q ss_pred hhHHhhcCeEEEEeCCeEEEecChhhHH
Q 000576 387 PEAYDLFDDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 387 ~~~~~~~D~vivL~~G~iv~~G~~~~~~ 414 (1412)
.++.+++|+|++|++|++++.|+++++.
T Consensus 213 ~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 213 GFARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 9999999999999999999999988764
No 320
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-34 Score=333.90 Aligned_cols=225 Identities=22% Similarity=0.241 Sum_probs=183.3
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.|+++||++.|....... ...+...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 589999998885321000 001235799999999999999999999999999999999997654 479999999876
Q ss_pred Ccc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch-hhhcccCCCCC
Q 000576 894 KQE------TFARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL-LRQALVGLPGV 964 (1412)
Q Consensus 894 ~~~------~~~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~ 964 (1412)
... .+++.++|++|++ .+.|.+|+.+++....... ......+.++.+.++++.++|.+ ..+.. .
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 431 2456799999997 5889999999987654332 12344555677899999999963 44443 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
..||||||||++|||||+.+|++|++||||++||..++..|++.|+++.++ |.|||++||+++ .+.+.+|++++|++
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 999999999986 46678999999985
Q ss_pred cEEEEEcCC
Q 000576 1044 GQEIYVGPL 1052 (1412)
Q Consensus 1044 G~~~y~G~~ 1052 (1412)
|+++..|+.
T Consensus 231 G~ive~g~~ 239 (327)
T PRK11308 231 GRCVEKGTK 239 (327)
T ss_pred CEEEEECCH
Confidence 899999986
No 321
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-34 Score=320.73 Aligned_cols=213 Identities=25% Similarity=0.389 Sum_probs=180.0
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
+.++|++++++ .+.+|+|+|++++|||+++|+|+||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~ 65 (232)
T cd03300 1 IELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDIT 65 (232)
T ss_pred CEEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcC
Confidence 35788888774 23699999999999999999999999999999999997654 4799999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 895 QE-TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 895 ~~-~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
.. ..++.++|++|+...++.+|+.||+.+....+. .......+.++++++.+++.+..+..+ ..||+||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~q 137 (232)
T cd03300 66 NLPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQ 137 (232)
T ss_pred cCChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHH
Confidence 32 224678999999998889999999987654331 223334456788999999987766553 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 138 rl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 138 RVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999998764 899999999986 57888999999985 899988864
No 322
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-34 Score=324.05 Aligned_cols=219 Identities=19% Similarity=0.267 Sum_probs=176.5
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC-CeEEEEEEEcCccC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT-GYVTGNITISGYPK 893 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~-~~~~G~i~i~g~~~ 893 (1412)
++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.++
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 67899998874 23699999999999999999999999999999999996432 23579999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHH
Q 000576 894 KQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTE 970 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgG 970 (1412)
.. ..+++.++|++|++.+++ .|++||+.+....+.... .....++.++++++.+++......... .....||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLK-QNALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhc-CCcccCCHH
Confidence 43 234567899999988887 699999988654432111 112334457889999999532211111 123579999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 971 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 971 qrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999986 57788999999985 8999998
Q ss_pred CC
Q 000576 1051 PL 1052 (1412)
Q Consensus 1051 ~~ 1052 (1412)
+.
T Consensus 224 ~~ 225 (246)
T PRK14269 224 ES 225 (246)
T ss_pred CH
Confidence 75
No 323
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4.1e-34 Score=337.92 Aligned_cols=203 Identities=20% Similarity=0.298 Sum_probs=174.7
Q ss_pred CceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCc----cCCc---cc---c-cceEEEec
Q 000576 838 DRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGY----PKKQ---ET---F-ARISGYCE 906 (1412)
Q Consensus 838 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~----~~~~---~~---~-~~~~~yv~ 906 (1412)
+...+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+|+|.++|. ++.. .. . ++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p--~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPV--SRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 346799999999999999999999999999999999997654 4799999996 2211 11 1 24699999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCc
Q 000576 907 QNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPS 986 (1412)
Q Consensus 907 Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~ 986 (1412)
|+..++|.+||+||+.|....+ .....++++.++++++.++|.+..+... ..||||||||++|||+|+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999876443 2334556677899999999988776654 4699999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 987 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 987 illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+++|++++|++ |+++..|+.
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~ 249 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTP 249 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999764 899999999987 57889999999985 899999986
No 324
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.3e-34 Score=321.08 Aligned_cols=196 Identities=25% Similarity=0.368 Sum_probs=161.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-------cceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-------QRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 238 (1412)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999887 8999999998765432 1469999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++.+||+||+.++....... . .+....++.+++.+||++..+..+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS----------V------------------------KEAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCCh-
Confidence 88899999998864321100 0 001123456888999987666544
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++. .+.+|+.++|+..++. .+|++++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRE-LNTSFLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHh-hcCEEEE
Confidence 479999999999999999999999999999999999999999999998653 2566677888888775 4799999
Q ss_pred EeCCeEE
Q 000576 399 ISDGQIV 405 (1412)
Q Consensus 399 L~~G~iv 405 (1412)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 325
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4.7e-34 Score=321.57 Aligned_cols=213 Identities=26% Similarity=0.397 Sum_probs=180.0
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 1 i~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~i~g~~~~ 65 (237)
T TIGR00968 1 IEIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQP--DSGRIRLNGQDAT 65 (237)
T ss_pred CEEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcC
Confidence 35788888774 23699999999999999999999999999999999997654 4799999998765
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 895 QE-TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 895 ~~-~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
.. ..++.++|++|++.+++.+|+.||+.+....+. .......+.++++++.+++.+..+... ..||+||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~q 137 (237)
T TIGR00968 66 RVHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQ 137 (237)
T ss_pred cCChhhcCEEEEecChhhccCCcHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHH
Confidence 32 234578999999998999999999987654331 222333456788999999977666543 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|++||++|+.+|++++|||||+|||..+...+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 138 rl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 138 RVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 999999999999999999999999999999999999998765 899999999986 57888999999985 899999885
No 326
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=336.94 Aligned_cols=214 Identities=20% Similarity=0.248 Sum_probs=173.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCC-CceeEEEECCccCCCcCc-------cceEEEEcCCC-
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL-RLYGRVTYNGHNMDEFVP-------QRTAAYISQHD- 236 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 236 (1412)
.++|+||||+|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 469999999999999999999999999999999999987421 138999999998765432 13699999986
Q ss_pred -CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccc
Q 000576 237 -VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADT 315 (1412)
Q Consensus 237 -~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 315 (1412)
.+.+.+||.+++....+..... ...+....++.+|+.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~---------------------------------~~~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGG---------------------------------NKKTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCC---------------------------------CHHHHHHHHHHHHHHCCCCChHH-
Confidence 4788999999987654321000 00112234567899999975221
Q ss_pred cccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000576 316 MVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDD 395 (1412)
Q Consensus 316 ~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~ 395 (1412)
+-++.+..|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+. .+.+++.++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCE
Confidence 113456689999999999999999999999999999999999999999999998653 466788899999999999999
Q ss_pred EEEEeCCeEEEecChhhHHH
Q 000576 396 IILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 396 vivL~~G~iv~~G~~~~~~~ 415 (1412)
|++|++|++++.|+.+++.+
T Consensus 224 i~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred EEEEECCEEEEECCHHHHhh
Confidence 99999999999999988753
No 327
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3.8e-34 Score=317.26 Aligned_cols=210 Identities=23% Similarity=0.318 Sum_probs=174.4
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ .+++|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 1 ~~~~~l~~~~~---------------~~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 63 (213)
T TIGR01277 1 LALDKVRYEYE---------------HLPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEP--ASGSIKVNDQSHT 63 (213)
T ss_pred CeEEeeeEEeC---------------CcceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEcc
Confidence 35788888763 135799999999999999999999999999999997654 4799999998764
Q ss_pred c-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 895 Q-ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 895 ~-~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
. ...++.++|++|++.+++.+|+.||+.+....+. .. ....++.++++++.+++.+..+..+ ..|||||||
T Consensus 64 ~~~~~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 135 (213)
T TIGR01277 64 GLAPYQRPVSMLFQENNLFAHLTVRQNIGLGLHPGL--KL-NAEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQ 135 (213)
T ss_pred cCChhccceEEEeccCccCCCCcHHHHHHhHhhccC--Cc-cHHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHH
Confidence 3 2345679999999999999999999976532211 11 1123456788999999987766553 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcC
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGP 1051 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~ 1051 (1412)
|++|||+|+.+|++++|||||+|||..++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |+++..|.
T Consensus 136 rl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 136 RVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999999999999999999999999999999998764 899999999986 56778999999985 89988874
No 328
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=328.50 Aligned_cols=205 Identities=28% Similarity=0.398 Sum_probs=170.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCc--C---ccceEEEEcCCCC-cC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEF--V---PQRTAAYISQHDV-HI 239 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~-~~ 239 (1412)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... . .++.++|++|++. .+
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQL 91 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhh
Confidence 45999999999999999999999999999999999999887 79999999987421 1 1357999999852 44
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
..+||+||+.++....+. .+ .+....+..+++.+||++..++.++
T Consensus 92 ~~~tv~e~i~~~~~~~~~-~~---------------------------------~~~~~~~~~~l~~~~L~~~~~~~~~- 136 (275)
T PRK13639 92 FAPTVEEDVAFGPLNLGL-SK---------------------------------EEVEKRVKEALKAVGMEGFENKPPH- 136 (275)
T ss_pred ccccHHHHHHHHHHHcCC-CH---------------------------------HHHHHHHHHHHHHCCCchhhcCChh-
Confidence 567999999876321110 00 0111234568899999877776554
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.+++|++++|
T Consensus 137 ----~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~--~~~til~vtH~~~~~~~~~d~i~~l 210 (275)
T PRK13639 137 ----HLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK--EGITIIISTHDVDLVPVYADKVYVM 210 (275)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEEEE
Confidence 6999999999999999999999999999999999999999999999864 3677777999999999999999999
Q ss_pred eCCeEEEecChhhHH
Q 000576 400 SDGQIVYQGPREHVL 414 (1412)
Q Consensus 400 ~~G~iv~~G~~~~~~ 414 (1412)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 211 SDGKIIKEGTPKEVF 225 (275)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998875
No 329
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.5e-34 Score=375.43 Aligned_cols=208 Identities=25% Similarity=0.379 Sum_probs=167.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 242 (1412)
+++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|++||.++++... ++.++||+|++.+ ++.
T Consensus 487 ~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~l-f~g 562 (708)
T TIGR01193 487 SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYI-FSG 562 (708)
T ss_pred CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCcee-hhH
Confidence 35899999999999999999999999999999999999997 7999999999877654 4789999997655 467
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
||+|||.++.+. +.+.+.+.+++...+ ..+.+. .++.+.||.+|+.+.
T Consensus 563 TI~eNi~l~~~~------------------------~~~~~~i~~a~~~a~-----l~~~i~---~lp~gldt~i~e~G~ 610 (708)
T TIGR01193 563 SILENLLLGAKE------------------------NVSQDEIWAACEIAE-----IKDDIE---NMPLGYQTELSEEGS 610 (708)
T ss_pred HHHHHHhccCCC------------------------CCCHHHHHHHHHHhC-----CHHHHH---hcccccCcEecCCCC
Confidence 999999986311 111111222211111 112221 377888999998664
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
+||||||||++||||++++|++|+||||||+||+.++..|.+.|+++ .++|+|.++|..+ ..+.+|+|++|++|
T Consensus 611 -~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~----~~~T~IiitHr~~-~~~~~D~i~~l~~G 684 (708)
T TIGR01193 611 -SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL----QDKTIIFVAHRLS-VAKQSDKIIVLDHG 684 (708)
T ss_pred -CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh----cCCEEEEEecchH-HHHcCCEEEEEECC
Confidence 79999999999999999999999999999999999999999999873 2455666777765 55789999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
+++++|+++++.+
T Consensus 685 ~i~~~G~~~~L~~ 697 (708)
T TIGR01193 685 KIIEQGSHDELLD 697 (708)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999864
No 330
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.3e-34 Score=321.14 Aligned_cols=207 Identities=25% Similarity=0.396 Sum_probs=164.8
Q ss_pred cccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCc
Q 000576 159 LSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVH 238 (1412)
Q Consensus 159 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~ 238 (1412)
++++++++++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+
T Consensus 5 l~~~~~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~ 79 (213)
T cd03235 5 LTVSYGGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSI 79 (213)
T ss_pred ceeEECCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEecccccc
Confidence 344444567999999999999999999999999999999999999887 7999999987642 34679999998655
Q ss_pred C--CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccc
Q 000576 239 I--GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 316 (1412)
Q Consensus 239 ~--~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 316 (1412)
. +.+||+||+.++...... .+.. .. .+....++.+++.+||++..++.
T Consensus 80 ~~~~~~tv~e~l~~~~~~~~~--~~~~----------------~~------------~~~~~~~~~~l~~~~l~~~~~~~ 129 (213)
T cd03235 80 DRDFPISVRDVVLMGLYGHKG--LFRR----------------LS------------KADKAKVDEALERVGLSELADRQ 129 (213)
T ss_pred ccCCCCcHHHHHHhccccccc--cccC----------------CC------------HHHHHHHHHHHHHcCCHHHHhCC
Confidence 3 348999999886421100 0000 00 00112356688899998666655
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
+ ..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+++++.++|+.+++.+++|++
T Consensus 130 ~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~~sH~~~~~~~~~d~i 202 (213)
T cd03235 130 I-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR--EGMTILVVTHDLGLVLEYFDRV 202 (213)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhcCEE
Confidence 4 46999999999999999999999999999999999999999999999865 3567777899999999999999
Q ss_pred EEEeCCeEEEec
Q 000576 397 ILISDGQIVYQG 408 (1412)
Q Consensus 397 ivL~~G~iv~~G 408 (1412)
++|++| +++.|
T Consensus 203 ~~l~~~-~~~~g 213 (213)
T cd03235 203 LLLNRT-VVASG 213 (213)
T ss_pred EEEcCc-EeecC
Confidence 999886 66554
No 331
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-34 Score=327.47 Aligned_cols=215 Identities=24% Similarity=0.308 Sum_probs=179.4
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKV--KSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 5899999988741 123589999999999999999999999999999999997654 479999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQ---ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
.. ...++.++|++|++. +++..|+.+++.+..... ....++..+.++++++.+++.+..+.. ...||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 43 234567999999974 677889999998764322 123334445678899999998766654 347999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.. +|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~~-~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAME-ADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHhc-CCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999987 4554 999999985 89999
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
.|+.
T Consensus 223 ~g~~ 226 (269)
T PRK13648 223 EGTP 226 (269)
T ss_pred ecCH
Confidence 9986
No 332
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=368.73 Aligned_cols=209 Identities=23% Similarity=0.389 Sum_probs=167.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 242 (1412)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.++ +.
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf-~~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLF-ND 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceee-cc
Confidence 45999999999999999999999999999999999999997 7999999999877653 47899999976655 57
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|++|||.++.... .+.+...++....+ .+..++ .|++..||.+|+++.
T Consensus 432 Ti~~Ni~~~~~~~------------------------~~~~~i~~al~~~~------l~~~i~--~lp~Gldt~ig~~g~ 479 (582)
T PRK11176 432 TIANNIAYARTEQ------------------------YSREQIEEAARMAY------AMDFIN--KMDNGLDTVIGENGV 479 (582)
T ss_pred hHHHHHhcCCCCC------------------------CCHHHHHHHHHHhC------cHHHHH--hcccccCceeCCCCC
Confidence 9999999863100 11111111111000 011122 377888999998764
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
.||||||||++|||||+++|++|+||||||+||+.++..+.+.|+++. .+.|++.++|.. +..+.||+|++|++|
T Consensus 480 -~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~---~~~tvI~VtHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 480 -LLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ---KNRTSLVIAHRL-STIEKADEILVVEDG 554 (582)
T ss_pred -cCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh---CCCEEEEEecch-HHHHhCCEEEEEECC
Confidence 799999999999999999999999999999999999999999999863 245566577776 556779999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
+++++|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999999864
No 333
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=327.51 Aligned_cols=207 Identities=21% Similarity=0.296 Sum_probs=166.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCC--CceeEEEECCccCCCc-----CccceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL--RLYGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 238 (1412)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++..
T Consensus 20 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 99 (254)
T PRK14273 20 FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNP 99 (254)
T ss_pred ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeecccc
Confidence 458999999999999999999999999999999999998631 1379999999876421 124579999998776
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC----cccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD----VCAD 314 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 314 (1412)
+ .+||+||+.|+....+.... .+....++.+++.+|+. +..|
T Consensus 100 ~-~~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~ 145 (254)
T PRK14273 100 F-LMSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLN 145 (254)
T ss_pred c-cCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHh
Confidence 6 58999999987533211000 00112345567777763 3334
Q ss_pred ccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000576 315 TMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFD 394 (1412)
Q Consensus 315 t~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D 394 (1412)
+. ++.|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +++++.++|+.+++.+++|
T Consensus 146 ~~-----~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tvii~sH~~~~~~~~~d 217 (254)
T PRK14273 146 TN-----ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE---SYTIIIVTHNMQQAGRISD 217 (254)
T ss_pred CC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCC
Confidence 43 457999999999999999999999999999999999999999999999842 4667778999999999999
Q ss_pred eEEEEeCCeEEEecChhhHH
Q 000576 395 DIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 395 ~vivL~~G~iv~~G~~~~~~ 414 (1412)
++++|++|+++.+|+++++.
T Consensus 218 ~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 218 RTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988874
No 334
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=335.81 Aligned_cols=209 Identities=21% Similarity=0.260 Sum_probs=174.9
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc------cceEEEEcCCC--
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP------QRTAAYISQHD-- 236 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d-- 236 (1412)
.+.+|+|||++|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|+++..... ++.++||+|++
T Consensus 27 ~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~ 103 (327)
T PRK11308 27 LVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYG 103 (327)
T ss_pred ceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchh
Confidence 356999999999999999999999999999999999999886 7999999998765432 35799999986
Q ss_pred CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCc-cccc
Q 000576 237 VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDV-CADT 315 (1412)
Q Consensus 237 ~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-~~dt 315 (1412)
.+.+.+||.+++....+...... ..+....+.++++.+||+. ..++
T Consensus 104 ~l~p~~~v~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~gL~~~~~~~ 150 (327)
T PRK11308 104 SLNPRKKVGQILEEPLLINTSLS---------------------------------AAERREKALAMMAKVGLRPEHYDR 150 (327)
T ss_pred hcCCccCHHHHHHHHHHHccCCC---------------------------------HHHHHHHHHHHHHHCCCChHHhcC
Confidence 57888999999987543321000 0011234567899999963 4444
Q ss_pred cccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000576 316 MVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDD 395 (1412)
Q Consensus 316 ~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~ 395 (1412)
.++.|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+. .+++++.++|+...+.+++|+
T Consensus 151 -----~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adr 224 (327)
T PRK11308 151 -----YPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADE 224 (327)
T ss_pred -----CCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCE
Confidence 45579999999999999999999999999999999999999999999998653 367788899999999999999
Q ss_pred EEEEeCCeEEEecChhhHHH
Q 000576 396 IILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 396 vivL~~G~iv~~G~~~~~~~ 415 (1412)
|++|++|++++.|+.+++.+
T Consensus 225 v~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 225 VMVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEEECCEEEEECCHHHHhc
Confidence 99999999999999988853
No 335
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=325.26 Aligned_cols=211 Identities=23% Similarity=0.323 Sum_probs=166.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCC--CCCCceeEEEECCccCCCc-----CccceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 238 (1412)
+.+|+|+|++|++|++++|+|||||||||||++|+|..+ +....+|+|.++|+++... ..++.++|++|++.+
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 98 (253)
T PRK14242 19 FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNP 98 (253)
T ss_pred eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCC
Confidence 459999999999999999999999999999999999864 1001379999999887531 113579999998777
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++ .||+||+.++....+...+ .+....++.+++.+||.+...+..
T Consensus 99 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 143 (253)
T PRK14242 99 FP-KSIFENVAYGLRVNGVKDK---------------------------------AYLAERVERSLRHAALWDEVKDRL- 143 (253)
T ss_pred Cc-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-
Confidence 76 5999999987533221000 001123455677778754221222
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
++.++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ +.+|+.++|+..++.+++|+|++
T Consensus 144 ~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tvii~tH~~~~~~~~~d~v~~ 220 (253)
T PRK14242 144 HESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA---RYTIIIVTHNMQQAARVSDVTAF 220 (253)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCeEEEEEecHHHHHHhCCEEEE
Confidence 234557999999999999999999999999999999999999999999999842 46777789999999999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000576 399 ISDGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~ 414 (1412)
|++|++++.|+++++.
T Consensus 221 l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 221 FYMGKLIEVGPTEQIF 236 (253)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988763
No 336
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=324.52 Aligned_cols=202 Identities=22% Similarity=0.355 Sum_probs=167.7
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGE 241 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 241 (1412)
++.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++
T Consensus 15 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~- 90 (241)
T PRK14250 15 GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE- 90 (241)
T ss_pred CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-
Confidence 345999999999999999999999999999999999999887 7999999988754322 357999999877665
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC-ccccccccCc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD-VCADTMVGDE 320 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~vg~~ 320 (1412)
.||+||+.++....+ . ....++.+++.+||+ +..++
T Consensus 91 ~tv~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~----- 127 (241)
T PRK14250 91 GTVKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATR----- 127 (241)
T ss_pred hhHHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhC-----
Confidence 699999987532110 0 001234578888996 33443
Q ss_pred ccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe
Q 000576 321 MIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS 400 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~ 400 (1412)
.+..||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+++|+|++|+
T Consensus 128 ~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tii~~sH~~~~~~~~~d~i~~l~ 206 (241)
T PRK14250 128 DVKNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNK-MNLTVIWITHNMEQAKRIGDYTAFLN 206 (241)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEeccHHHHHHhCCEEEEEe
Confidence 34579999999999999999999999999999999999999999999997653 35677779999999999999999999
Q ss_pred CCeEEEecChhhHH
Q 000576 401 DGQIVYQGPREHVL 414 (1412)
Q Consensus 401 ~G~iv~~G~~~~~~ 414 (1412)
+|+++..|+++++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (241)
T PRK14250 207 KGILVEYAKTYDFF 220 (241)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988763
No 337
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=325.21 Aligned_cols=205 Identities=25% Similarity=0.326 Sum_probs=169.8
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCC------c---CccceEEEEcCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDE------F---VPQRTAAYISQH 235 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~------~---~~~~~~~yv~Q~ 235 (1412)
++.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|+
T Consensus 14 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~ 90 (242)
T PRK11124 14 AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQ 90 (242)
T ss_pred CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecC
Confidence 346999999999999999999999999999999999999886 7999999987631 0 113579999999
Q ss_pred CCcCCCCCHHHHHHHhh-hhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccc
Q 000576 236 DVHIGEMTVRETLAFSA-RCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCAD 314 (1412)
Q Consensus 236 d~~~~~lTV~e~l~f~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d 314 (1412)
+.+++.+||+||+.+.. ...+... .+....++.+++.+||++..+
T Consensus 91 ~~~~~~~tv~e~i~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~ 136 (242)
T PRK11124 91 YNLWPHLTVQQNLIEAPCRVLGLSK----------------------------------DQALARAEKLLERLRLKPYAD 136 (242)
T ss_pred ccccCCCcHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhh
Confidence 88899999999997532 1111000 001123566888999987666
Q ss_pred ccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000576 315 TMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFD 394 (1412)
Q Consensus 315 t~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D 394 (1412)
+.+ ..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.. .+++++.++|+..++.+++|
T Consensus 137 ~~~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~sh~~~~~~~~~d 209 (242)
T PRK11124 137 RFP-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE--TGITQVIVTHEVEVARKTAS 209 (242)
T ss_pred CCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhcC
Confidence 554 47999999999999999999999999999999999999999999998753 35677778999999999999
Q ss_pred eEEEEeCCeEEEecChhhH
Q 000576 395 DIILISDGQIVYQGPREHV 413 (1412)
Q Consensus 395 ~vivL~~G~iv~~G~~~~~ 413 (1412)
++++|.+|+++++|+++++
T Consensus 210 ~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 210 RVVYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEEEECCEEEEeCCHHHh
Confidence 9999999999999988764
No 338
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-34 Score=333.77 Aligned_cols=221 Identities=19% Similarity=0.247 Sum_probs=179.3
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC---CeEEEEEEEc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT---GYVTGNITIS 889 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 889 (1412)
..++++|+++++.. +.+.+|+|+|++|++||++||+||||||||||+++|+|.... .+.+|+|.+|
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 36899999998841 124599999999999999999999999999999999996532 1347999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCH-HHHHHHHHHHHHHcCCchhhhcccCCCC
Q 000576 890 GYPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDS-KTRKMFIEEVMELVELNLLRQALVGLPG 963 (1412)
Q Consensus 890 g~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~-~~~~~~v~~~l~~l~l~~~~~~~vg~~~ 963 (1412)
|.++.. ...++.++||+|++.+++ .|++||+.|..... ...+ +..++.++++++.++|.+..++.++..
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~- 222 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDKA- 222 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-
Confidence 998752 234667999999988775 79999999864322 1222 222344677888888754333334433
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
..+||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++
T Consensus 223 ~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~- 299 (329)
T PRK14257 223 GNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ- 299 (329)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 457999999999999999999999999999999999999999999999875 699999999987 47778999999985
Q ss_pred cEEEEEcCC
Q 000576 1044 GQEIYVGPL 1052 (1412)
Q Consensus 1044 G~~~y~G~~ 1052 (1412)
|+++..|++
T Consensus 300 G~i~e~g~~ 308 (329)
T PRK14257 300 GWIEEAGET 308 (329)
T ss_pred CEEEEeCCH
Confidence 899999986
No 339
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-34 Score=292.79 Aligned_cols=214 Identities=26% Similarity=0.365 Sum_probs=184.5
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
+..++++.+|+.. ...+|+|||+.|.+||.+.++||||||||||||+++|..++ ..|+|.+||.+++
T Consensus 4 l~~~~~sl~y~g~-----------~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P--~~G~i~l~~r~i~ 70 (259)
T COG4525 4 LNVSHLSLSYEGK-----------PRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTP--SRGSIQLNGRRIE 70 (259)
T ss_pred eehhheEEecCCc-----------chhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCc--ccceEEECCEecc
Confidence 4566777776521 24589999999999999999999999999999999998765 5799999999876
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHH
Q 000576 895 QETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKR 974 (1412)
Q Consensus 895 ~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqR 974 (1412)
...- ..|.|+|++.++|.+||.||+.|+..++. +.+.++.+.+.+.+..+||.+..+..+ -.||||||||
T Consensus 71 gPga--ergvVFQ~~~LlPWl~~~dNvafgL~l~G---i~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQR 140 (259)
T COG4525 71 GPGA--ERGVVFQNEALLPWLNVIDNVAFGLQLRG---IEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQR 140 (259)
T ss_pred CCCc--cceeEeccCccchhhHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHH
Confidence 4332 24899999999999999999999998874 567888889999999999998877654 4799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhhccEeEEecC-cEEEEEcCC
Q 000576 975 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLLKRG-GQEIYVGPL 1052 (1412)
Q Consensus 975 l~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g-G~~~y~G~~ 1052 (1412)
+.|||||..+|+.|+||||.+.||+-+++.++++|-++. .+|+.++++||+... ..-+++++++|+.| ||++..=|+
T Consensus 141 vGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieE-AlflatrLvvlsp~pgRvv~~~~~ 219 (259)
T COG4525 141 VGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLLITHDIEE-ALFLATRLVVLSPGPGRVVERLPL 219 (259)
T ss_pred HHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHH-HHhhhheeEEecCCCceeeEecCC
Confidence 999999999999999999999999999999999998876 469999999999874 44578999999843 788877666
No 340
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=327.40 Aligned_cols=219 Identities=21% Similarity=0.261 Sum_probs=175.6
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEEc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITIS 889 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~ 889 (1412)
..++++|++++++ .+.+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3689999998874 246999999999999999999999999999999999975421 257999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCC
Q 000576 890 GYPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGV 964 (1412)
Q Consensus 890 g~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~ 964 (1412)
|.++.. ...++.++|++|++.+++. ||+||+.+.+..+. ... ..++.++++++.+++....+.... ...
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~-~~~ 152 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFPK-SIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLN-ESG 152 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccchh-hHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhC-CCc
Confidence 987531 2345678999999888874 99999988764432 111 223456778888877421111111 123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec--
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR-- 1042 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~-- 1042 (1412)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.||++++|++
T Consensus 153 ~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~~~ 230 (269)
T PRK14259 153 YSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFFNAEE 230 (269)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEeccc
Confidence 57999999999999999999999999999999999999999999999864 799999999987 57889999999985
Q ss_pred --------CcEEEEEcCC
Q 000576 1043 --------GGQEIYVGPL 1052 (1412)
Q Consensus 1043 --------gG~~~y~G~~ 1052 (1412)
+|++++.|++
T Consensus 231 ~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 231 VEGGSGGKVGYLVEFNET 248 (269)
T ss_pred cccccccccceEEEeCCH
Confidence 3678999986
No 341
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.1e-34 Score=364.50 Aligned_cols=207 Identities=26% Similarity=0.431 Sum_probs=165.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 242 (1412)
+++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.++ +.
T Consensus 353 ~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf-~~ 428 (574)
T PRK11160 353 QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLF-SA 428 (574)
T ss_pred CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhh-cc
Confidence 35899999999999999999999999999999999999997 7999999999877654 46799999976554 67
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|++||+.++... .+.+...++....+ .+..+ -. +++.||.+|+++.
T Consensus 429 ti~~Ni~~~~~~-------------------------~~~~~i~~al~~~~------l~~~i--~~-p~GldT~vge~g~ 474 (574)
T PRK11160 429 TLRDNLLLAAPN-------------------------ASDEALIEVLQQVG------LEKLL--ED-DKGLNAWLGEGGR 474 (574)
T ss_pred cHHHHhhcCCCc-------------------------cCHHHHHHHHHHcC------CHHHH--cC-ccccCchhcCCCC
Confidence 999999986320 11111111111000 01111 13 6778999998755
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
.||||||||++||||++++|++|+||||||+||+.++..|.+.|+++. +++|++.++|..+.+ +.+|+|++|++|
T Consensus 475 -~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~---~~~tviiitHr~~~~-~~~d~i~~l~~G 549 (574)
T PRK11160 475 -QLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA---QNKTVLMITHRLTGL-EQFDRICVMDNG 549 (574)
T ss_pred -CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc---CCCEEEEEecChhHH-HhCCEEEEEeCC
Confidence 699999999999999999999999999999999999999999999874 245555577776655 569999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
++++.|+++++.+
T Consensus 550 ~i~~~g~~~~l~~ 562 (574)
T PRK11160 550 QIIEQGTHQELLA 562 (574)
T ss_pred eEEEeCCHHHHHh
Confidence 9999999999864
No 342
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=358.43 Aligned_cols=221 Identities=21% Similarity=0.319 Sum_probs=184.8
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ ++.+|+|||+++++||+++|+||||||||||+++|+|...+++.+|+|.++|.++
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 488999998874 2469999999999999999999999999999999999765433579999999876
Q ss_pred Cccc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQET----FARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~~~----~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
.... .++.+||++|++.+++.+||+|++.+....+.......++.++.++++++.+++.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 4321 24568999999988999999999988653321111123334456889999999977666553 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
|||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|.|||+++|+++ .+.+.+|++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999877999999999986 57788999999985 899999
Q ss_pred cCCCC
Q 000576 1050 GPLGR 1054 (1412)
Q Consensus 1050 G~~~~ 1054 (1412)
|+..+
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 98754
No 343
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=5.2e-34 Score=320.90 Aligned_cols=200 Identities=29% Similarity=0.396 Sum_probs=168.0
Q ss_pred ceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCc--ccccceEEEec-cCCCCCCCC
Q 000576 839 RLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQ--ETFARISGYCE-QNDIHSPQV 915 (1412)
Q Consensus 839 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~~yv~-Q~~~~~~~l 915 (1412)
.+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++ |++.+++.+
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 110 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQP--TSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDL 110 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEccccchhhcccEEEEcCCccccCCCC
Confidence 45799999999999999999999999999999999997654 47999999986432 23456789997 556777899
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 000576 916 TVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 995 (1412)
Q Consensus 916 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTs 995 (1412)
|++|++.+...++. ...++..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+
T Consensus 111 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~ 182 (236)
T cd03267 111 PVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPTI 182 (236)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 99999987654432 223334456788999999987776654 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 996 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 996 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
|||+.+...+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 183 ~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 183 GLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 99999999999999998764 899999999986 57788999999985 7888765
No 344
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3.7e-34 Score=324.25 Aligned_cols=217 Identities=23% Similarity=0.317 Sum_probs=171.8
Q ss_pred ccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCC--CCCCCceeEEEECCccCCCcCc----cceEEEEcCC
Q 000576 162 RKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKL--DSSLRLYGRVTYNGHNMDEFVP----QRTAAYISQH 235 (1412)
Q Consensus 162 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~ 235 (1412)
+++++.+|+|+|++|++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|+++..... +..++|++|+
T Consensus 9 ~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~ 85 (243)
T TIGR01978 9 SVEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQY 85 (243)
T ss_pred EECCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecc
Confidence 334456999999999999999999999999999999999995 555 7999999998754332 2348999999
Q ss_pred CCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCc-ccc
Q 000576 236 DVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDV-CAD 314 (1412)
Q Consensus 236 d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-~~d 314 (1412)
+..++.+|++|++.+..+...... +.... ...+....++.+++.+||+. ..+
T Consensus 86 ~~~~~~~t~~~~~~~~~~~~~~~~------------------~~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~ 138 (243)
T TIGR01978 86 PEEIPGVSNLEFLRSALNARRSAR------------------GEEPL---------DLLDFLKLLKAKLALLGMDEEFLN 138 (243)
T ss_pred ccccCCcCHHHHHHHHHHHhhccc------------------ccccc---------cHHHHHHHHHHHHHHcCCchhhcc
Confidence 988999999999988643211000 00000 00011234567889999973 445
Q ss_pred ccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh-c
Q 000576 315 TMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDL-F 393 (1412)
Q Consensus 315 t~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~-~ 393 (1412)
+.++ ..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++... +
T Consensus 139 ~~~~----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~vsH~~~~~~~~~~ 212 (243)
T TIGR01978 139 RSVN----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE--PDRSFLIITHYQRLLNYIKP 212 (243)
T ss_pred cccc----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCcEEEEEEecHHHHHhhcC
Confidence 4433 14999999999999999999999999999999999999999999999854 356777789999999888 8
Q ss_pred CeEEEEeCCeEEEecChhhHH
Q 000576 394 DDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 394 D~vivL~~G~iv~~G~~~~~~ 414 (1412)
|++++|++|++++.|+++++.
T Consensus 213 d~i~~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 213 DYVHVLLDGRIVKSGDVELAK 233 (243)
T ss_pred CeEEEEeCCEEEEecCHHHhc
Confidence 999999999999999987653
No 345
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3.4e-34 Score=321.08 Aligned_cols=198 Identities=24% Similarity=0.361 Sum_probs=166.2
Q ss_pred ecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHH
Q 000576 843 LNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQETFARISGYCEQNDIHSPQVTVYESLL 922 (1412)
Q Consensus 843 L~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~ 922 (1412)
|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQP--TSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 5789999999999999999999999999999997654 4799999998764322 12489999999999999999998
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHH
Q 000576 923 YSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1002 (1412)
Q Consensus 923 f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~ 1002 (1412)
+...... ......+.++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVL-PDLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhcc-cCCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 7532111 12233344556788999999987666543 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 1003 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1003 ~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999987 57888999999985 899988764
No 346
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-34 Score=327.47 Aligned_cols=219 Identities=26% Similarity=0.347 Sum_probs=177.9
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC------eEEEEEEE
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG------YVTGNITI 888 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~------~~~G~i~i 888 (1412)
++++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 67899998773 246999999999999999999999999999999999975532 12799999
Q ss_pred cCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCC
Q 000576 889 SGYPKKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLS-PEVDSKTRKMFIEEVMELVELNLLRQALVGLPGV 964 (1412)
Q Consensus 889 ~g~~~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~ 964 (1412)
+|.+... ..+++.++|++|++..++.+||+||+.+....... ......+.++.++++++.+++.+..+.. .
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9987642 23455689999998766679999999875321110 0111123345678899999998765543 3
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhh
Q 000576 965 NGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAF 1034 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~---------~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~f 1034 (1412)
..||||||||++||++|+ .+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 479999999999999999 599999999999999999999999999998765 899999999987 577889
Q ss_pred ccEeEEecCcEEEEEcCCC
Q 000576 1035 DELFLLKRGGQEIYVGPLG 1053 (1412)
Q Consensus 1035 D~v~ll~~gG~~~y~G~~~ 1053 (1412)
|++++|++ |++++.|+..
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999985 8999999863
No 347
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-34 Score=330.07 Aligned_cols=205 Identities=25% Similarity=0.355 Sum_probs=171.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC----ccceEEEEcCCCC-cCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV----PQRTAAYISQHDV-HIG 240 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 240 (1412)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999987 799999999875421 2467999999863 344
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000576 241 EMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 320 (1412)
Q Consensus 241 ~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 320 (1412)
..||.||+.|+....+... .+....++++++.+||++..++.++
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~-- 143 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAPH-- 143 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCcc--
Confidence 5799999998753322100 0112245678999999877776654
Q ss_pred ccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe
Q 000576 321 MIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS 400 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~ 400 (1412)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.. +|++++|+
T Consensus 144 ---~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 144 ---LLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKK-YGITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred ---cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecChHHHhc-CCEEEEEE
Confidence 69999999999999999999999999999999999999999999998653 36677778899888876 99999999
Q ss_pred CCeEEEecChhhHH
Q 000576 401 DGQIVYQGPREHVL 414 (1412)
Q Consensus 401 ~G~iv~~G~~~~~~ 414 (1412)
+|+++++|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998875
No 348
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-34 Score=334.25 Aligned_cols=226 Identities=17% Similarity=0.209 Sum_probs=179.3
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC--CeEEEEEEEcCc
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT--GYVTGNITISGY 891 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~~~~G~i~i~g~ 891 (1412)
.++++|+++.|... ++...+|+|||++|++||++||+|+||||||||+++|+|...+ ...+|+|.++|.
T Consensus 3 ~L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~ 73 (330)
T PRK15093 3 LLDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDI 73 (330)
T ss_pred eEEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCE
Confidence 47899999888521 1235699999999999999999999999999999999997542 135799999998
Q ss_pred cCCcc---c----ccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCC---CCHHHHHHHHHHHHHHcCCchhhhccc
Q 000576 892 PKKQE---T----FARISGYCEQNDI--HSPQVTVYESLLYSAWLRLSPE---VDSKTRKMFIEEVMELVELNLLRQALV 959 (1412)
Q Consensus 892 ~~~~~---~----~~~~~~yv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~---~~~~~~~~~v~~~l~~l~l~~~~~~~v 959 (1412)
++... . .++.++||+|++. +.|.+||.+++.+......... ....+.++.+.++++.++|.+..+...
T Consensus 74 ~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~ 153 (330)
T PRK15093 74 DLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMR 153 (330)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHh
Confidence 76431 1 1246899999975 5788999999975422110000 111234557889999999975332221
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEe
Q 000576 960 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1038 (1412)
Q Consensus 960 g~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ 1038 (1412)
. ....|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|||++||+++ .+.+.+|+++
T Consensus 154 ~--~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dri~ 230 (330)
T PRK15093 154 S--FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADKIN 230 (330)
T ss_pred C--CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEE
Confidence 1 13579999999999999999999999999999999999999999999999864 899999999986 5778899999
Q ss_pred EEecCcEEEEEcCC
Q 000576 1039 LLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1039 ll~~gG~~~y~G~~ 1052 (1412)
+|.+ |++++.|+.
T Consensus 231 vm~~-G~ive~g~~ 243 (330)
T PRK15093 231 VLYC-GQTVETAPS 243 (330)
T ss_pred EEEC-CEEEEECCH
Confidence 9985 899999986
No 349
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=5.4e-34 Score=310.83 Aligned_cols=190 Identities=51% Similarity=0.860 Sum_probs=162.8
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCC--CCCeEEEEEEEcCc
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRK--TTGYVTGNITISGY 891 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~--~~~~~~G~i~i~g~ 891 (1412)
.++++|+++.++... ....+.+|+|+|+++++||+++|+||||||||||+++|+|.. .+ .+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~--~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLG--VSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCC--CceEEEECCE
Confidence 478999999885210 001246999999999999999999999999999999999976 43 5799999999
Q ss_pred cCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHH
Q 000576 892 PKKQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQ 971 (1412)
Q Consensus 892 ~~~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGq 971 (1412)
+......++.++|++|++.+++.+|++|++.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8764445677999999998889999999997542110 499999
Q ss_pred HHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 972 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 972 rqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
|||++|||+|+.+|++++|||||+|||..++..+.+.|+++.++|+|||+++|+++.++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999998877999999999987567888999999985 7888764
No 350
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-34 Score=328.65 Aligned_cols=205 Identities=21% Similarity=0.325 Sum_probs=168.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC-------ccceEEEEcCCCC-
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV-------PQRTAAYISQHDV- 237 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 237 (1412)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999999887 799999998875421 1356999999852
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCc-ccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDV-CADTM 316 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-~~dt~ 316 (1412)
.+...||+||+.|.....+... .+....++.+++.+||.. ..+..
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 142 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVSQ----------------------------------EEAEALAREKLALVGISESLFEKN 142 (280)
T ss_pred hhccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 3445799999988643221100 011123456788899963 34444
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
++.||||||||++||+||+.+|++|||||||+|||+.++..+.+.|+++.+ .+++|++++|+.+++.+++|++
T Consensus 143 -----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 143 -----PFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ--SGMTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHHhCCEE
Confidence 447999999999999999999999999999999999999999999999864 3567777899999999999999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000576 397 ILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~ 414 (1412)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 351
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-34 Score=319.75 Aligned_cols=209 Identities=27% Similarity=0.375 Sum_probs=175.0
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGE 241 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~ 241 (1412)
++.+++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.+... ++.++|++|++..++.
T Consensus 10 ~~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~ 86 (232)
T cd03300 10 YGGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPH 86 (232)
T ss_pred eCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCC
Confidence 33456999999999999999999999999999999999999987 7999999998765332 4679999999888888
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
+|++||+.++....+.. . .......+.+++.+||++..++.+
T Consensus 87 ~t~~~nl~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 128 (232)
T cd03300 87 LTVFENIAFGLRLKKLP--K--------------------------------AEIKERVAEALDLVQLEGYANRKP---- 128 (232)
T ss_pred CcHHHHHHHHHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCchhhcCCh----
Confidence 99999998865332110 0 001123466889999987776554
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++. .+.+|+.++|+..++.+++|++++|++
T Consensus 129 -~~lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sh~~~~~~~~~d~i~~l~~ 206 (232)
T cd03300 129 -SQLSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKE-LGITFVFVTHDQEEALTMSDRIAVMNK 206 (232)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 479999999999999999999999999999999999999999999998653 356667688999999999999999999
Q ss_pred CeEEEecChhhHH
Q 000576 402 GQIVYQGPREHVL 414 (1412)
Q Consensus 402 G~iv~~G~~~~~~ 414 (1412)
|++++.|+.+++.
T Consensus 207 G~~~~~~~~~~~~ 219 (232)
T cd03300 207 GKIQQIGTPEEIY 219 (232)
T ss_pred CEEEecCCHHHHH
Confidence 9999999887764
No 352
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=329.56 Aligned_cols=217 Identities=24% Similarity=0.288 Sum_probs=180.4
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCe-EEEEEEEcCcc
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGY-VTGNITISGYP 892 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~-~~G~i~i~g~~ 892 (1412)
.++++|+++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|...+.. .+|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4889999988741 12358999999999999999999999999999999999765421 13899999988
Q ss_pred CCc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 893 KKQ---ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
... ...++.+||++|++. .++..||+||+.|..... ....++.++.++++++.++|.+..+... +.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCC
Confidence 653 234567899999974 567899999998764322 2334455567889999999987666553 5799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI 1047 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~ 1047 (1412)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++. + +.+|++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 8999999999873 4 57999999985 8999
Q ss_pred EEcCC
Q 000576 1048 YVGPL 1052 (1412)
Q Consensus 1048 y~G~~ 1052 (1412)
+.|++
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99986
No 353
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=4.4e-34 Score=327.16 Aligned_cols=208 Identities=25% Similarity=0.333 Sum_probs=171.3
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc------cceEEEEcCCC--
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP------QRTAAYISQHD-- 236 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d-- 236 (1412)
++.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 456999999999999999999999999999999999999887 7999999988764322 35699999985
Q ss_pred CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC-ccccc
Q 000576 237 VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD-VCADT 315 (1412)
Q Consensus 237 ~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt 315 (1412)
.+.+.+||+||+.+....... .. ..+....++.+++.+||+ +..+.
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~~------------------~~---------------~~~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLTS------------------LD---------------ESEQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhcC------------------CC---------------HHHHHHHHHHHHHHcCCChhhhhC
Confidence 356789999999875421100 00 001122356688999996 45554
Q ss_pred cccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000576 316 MVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDD 395 (1412)
Q Consensus 316 ~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~ 395 (1412)
. ++.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+...+.+++|+
T Consensus 147 ~-----~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~ 220 (265)
T TIGR02769 147 L-----PRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQA-FGTAYLFITHDLRLVQSFCQR 220 (265)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHHhcE
Confidence 4 4479999999999999999999999999999999999999999999998653 356777789999999999999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000576 396 IILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 396 vivL~~G~iv~~G~~~~~~ 414 (1412)
+++|++|++++.|+++++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999998874
No 354
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-34 Score=328.98 Aligned_cols=219 Identities=20% Similarity=0.292 Sum_probs=180.0
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++... ....+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIP--SEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEec
Confidence 478999999885210 00124699999999999999999999999999999999997654 479999999876
Q ss_pred Cc----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 894 KQ----ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 894 ~~----~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
.. ...++.+||++|++. .+...||.|++.|..... .....+.++.++++++.++|.+..+..+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 234567999999974 233469999998875432 2233444567899999999988777654 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEI 1047 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~ 1047 (1412)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++. .+|++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 999999999987 354 4999999985 8999
Q ss_pred EEcCC
Q 000576 1048 YVGPL 1052 (1412)
Q Consensus 1048 y~G~~ 1052 (1412)
+.|+.
T Consensus 224 ~~g~~ 228 (280)
T PRK13633 224 MEGTP 228 (280)
T ss_pred EecCH
Confidence 99986
No 355
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=322.77 Aligned_cols=209 Identities=26% Similarity=0.361 Sum_probs=174.6
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDP--TEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEh
Confidence 478999998873 23599999999999999999999999999999999997554 479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCCCCCCCH
Q 000576 894 KQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN-LLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~lSg 969 (1412)
.. ...++.++|++|++.+++ .||+||+.+....+ . . ....++++++.+++. +..+.. ...|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~-~---~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G-E---KNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C-c---HHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 42 234567899999988776 69999987653321 1 1 123577889999996 444443 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999987 57788999999985 79999
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
.|++
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8875
No 356
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-34 Score=316.95 Aligned_cols=195 Identities=23% Similarity=0.349 Sum_probs=163.6
Q ss_pred ceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCCCCHHHHHH
Q 000576 171 GVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTVRETLA 249 (1412)
Q Consensus 171 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~e~l~ 249 (1412)
|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999887 7999999998754432 357999999988888899999998
Q ss_pred HhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChhh
Q 000576 250 FSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGGQ 329 (1412)
Q Consensus 250 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGGq 329 (1412)
++...... . . .+.+..++++++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~~-~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGLK-L--T-------------------------------AEDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred cccccccC-c--c-------------------------------HHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 75421100 0 0 001123567889999987666554 4799999
Q ss_pred hhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEEec
Q 000576 330 RKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVYQG 408 (1412)
Q Consensus 330 kqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G 408 (1412)
|||++||+||+.+|++++|||||+|||..++..+.+.|+++++. .+.+|+.++|+..++.+++|++++|++|+++..|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAE-TKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999999999999998653 3567777999999999999999999999998764
No 357
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.1e-32 Score=358.51 Aligned_cols=210 Identities=28% Similarity=0.392 Sum_probs=175.8
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++||+|+|+. ..+.+|+|+|++|+|||++||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 46999999999852 124699999999999999999999999999999999997664 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh-------hcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR-------QALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~vg~~ 962 (1412)
+++ ..+++.+|||+|++.+++ -|++||+.+.. ++.++ +.++++++..++.+.. |+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~~----~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIPD----ADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCCH----HHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 653 457889999999998875 59999997531 22232 3366777777776543 4555544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
+.+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|+++|+++ ....+|++++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 467999999999999999999999999999999999999999999986 4899999999986 4577999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|+++..|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 899999985
No 358
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-34 Score=322.79 Aligned_cols=219 Identities=26% Similarity=0.304 Sum_probs=175.2
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--CC-eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT--TG-YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 890 (1412)
.++++|++++++ .+.+|+|+|++|++||+++|+||||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 478999998874 2359999999999999999999999999999999999632 21 1379999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.+... ..+++.++|++|+..+++ .||+||+.+....+. .......++.++++++.+++.+....... ....
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLH-DSAL 147 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHh-cCcc
Confidence 87632 134567999999988777 899999987653321 11122334567788888887531111111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 148 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14239 148 GLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFLD-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 699999999986 57888999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
+++.|+.
T Consensus 225 i~~~g~~ 231 (252)
T PRK14239 225 LIEYNDT 231 (252)
T ss_pred EEEeCCH
Confidence 9999885
No 359
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=325.20 Aligned_cols=214 Identities=22% Similarity=0.322 Sum_probs=169.8
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCC--CCceeEEEECCccCCC--c---CccceEEEEcCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRLYGRVTYNGHNMDE--F---VPQRTAAYISQHDV 237 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~ 237 (1412)
++++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|+++|+++.. . ..++.++|++|++.
T Consensus 16 ~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 95 (253)
T PRK14267 16 SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPN 95 (253)
T ss_pred CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCc
Confidence 346999999999999999999999999999999999998763 1137999999998752 1 12357999999988
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
+++.+||+||+.++....+..... .+....++++++.+||........
T Consensus 96 ~~~~~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 143 (253)
T PRK14267 96 PFPHLTIYDNVAIGVKLNGLVKSK--------------------------------KELDERVEWALKKAALWDEVKDRL 143 (253)
T ss_pred cCCCCcHHHHHHHHHHhcCccCCH--------------------------------HHHHHHHHHHHHHcCCccchhhhh
Confidence 888999999999865322110000 001123456777888753211111
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
++.+..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.+|++++|+.+++.+++|+|+
T Consensus 144 -~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~i~ 219 (253)
T PRK14267 144 -NDYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK---EYTIVLVTHSPAQAARVSDYVA 219 (253)
T ss_pred -ccChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh---CCEEEEEECCHHHHHhhCCEEE
Confidence 234557999999999999999999999999999999999999999999999853 3677778999999999999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000576 398 LISDGQIVYQGPREHVL 414 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~ 414 (1412)
+|++|++++.|+++++.
T Consensus 220 ~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 220 FLYLGKLIEVGPTRKVF 236 (253)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988764
No 360
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=9.8e-33 Score=354.69 Aligned_cols=124 Identities=23% Similarity=0.300 Sum_probs=100.8
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchh-hhcccCCCCCCCCCHHHHHHHHHHHHHhh---CCcEE
Q 000576 913 PQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLL-RQALVGLPGVNGLSTEQRKRLTIAVELVA---NPSII 988 (1412)
Q Consensus 913 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~vg~~~~~~lSgGqrqRl~ia~~L~~---~p~il 988 (1412)
-++||.|.+.|...+. .. ....++++.++|... .+.. .+.||||||||+.||++|+. +|+++
T Consensus 788 l~~tv~e~~~f~~~~~---~i------~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~ll 853 (924)
T TIGR00630 788 LDMTVEEAYEFFEAVP---SI------SRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLY 853 (924)
T ss_pred hCCcHHHHHHHHHhcc---ch------hHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEE
Confidence 3578888887765432 11 124578888998653 2322 35799999999999999997 59999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEe-----cCcEEEEEcCC
Q 000576 989 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLK-----RGGQEIYVGPL 1052 (1412)
Q Consensus 989 llDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~-----~gG~~~y~G~~ 1052 (1412)
+|||||+|||+.+...+++.|+++.++|.|||+++|++. +.+.+|+++.|. +||++++.|++
T Consensus 854 ILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 854 ILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 999999999999999999999999888999999999986 346799999994 57999999985
No 361
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.1e-34 Score=328.14 Aligned_cols=218 Identities=24% Similarity=0.325 Sum_probs=174.1
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC--------ccceEEEEcCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV--------PQRTAAYISQH 235 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--------~~~~~~yv~Q~ 235 (1412)
+++++|+|+|+++++||+++|+||||||||||+++|+|.++|+...+|+|.++|+++.... .++.++|++|+
T Consensus 15 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~ 94 (262)
T PRK09984 15 NQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQ 94 (262)
T ss_pred CCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccc
Confidence 3456999999999999999999999999999999999999875223699999998774321 13568999999
Q ss_pred CCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccc
Q 000576 236 DVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADT 315 (1412)
Q Consensus 236 d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 315 (1412)
+.+++.+||+||+.++..... . ..... .... ..+....++.+++.+||++..|.
T Consensus 95 ~~~~~~~tv~e~l~~~~~~~~--~-------~~~~~--~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~ 148 (262)
T PRK09984 95 FNLVNRLSVLENVLIGALGST--P-------FWRTC--FSWF---------------TREQKQRALQALTRVGMVHFAHQ 148 (262)
T ss_pred cccccCCcHHHHHHhhhcccc--c-------chhhh--cccc---------------cHHHHHHHHHHHHHcCCHHHHhC
Confidence 888889999999987642100 0 00000 0000 00112345678999999876665
Q ss_pred cccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000576 316 MVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDD 395 (1412)
Q Consensus 316 ~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~ 395 (1412)
.++ .|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++++. .+++|+.++|+.+++.+++|+
T Consensus 149 ~~~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~tH~~~~~~~~~d~ 222 (262)
T PRK09984 149 RVS-----TLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQN-DGITVVVTLHQVDYALRYCER 222 (262)
T ss_pred Ccc-----ccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCE
Confidence 544 69999999999999999999999999999999999999999999998653 357777789999999999999
Q ss_pred EEEEeCCeEEEecChhhH
Q 000576 396 IILISDGQIVYQGPREHV 413 (1412)
Q Consensus 396 vivL~~G~iv~~G~~~~~ 413 (1412)
+++|++|++++.|+++++
T Consensus 223 i~~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 223 IVALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEEEECCEEEEeCCHHHh
Confidence 999999999999998764
No 362
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=328.36 Aligned_cols=212 Identities=24% Similarity=0.381 Sum_probs=173.2
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIG 240 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 240 (1412)
+++.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++..++
T Consensus 18 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~ 94 (265)
T PRK10253 18 GKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPG 94 (265)
T ss_pred CCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCC
Confidence 3456999999999999999999999999999999999999886 7999999998754322 356999999988888
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000576 241 EMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 320 (1412)
Q Consensus 241 ~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 320 (1412)
.+||+||+.++..-... .. .... ......++.+++.+||++..++.
T Consensus 95 ~~tv~~~~~~~~~~~~~--~~----------------~~~~------------~~~~~~~~~~l~~~~l~~~~~~~---- 140 (265)
T PRK10253 95 DITVQELVARGRYPHQP--LF----------------TRWR------------KEDEEAVTKAMQATGITHLADQS---- 140 (265)
T ss_pred CCcHHHHHHhCcccccc--cc----------------cCCC------------HHHHHHHHHHHHHcCCHHHhcCC----
Confidence 89999999875210000 00 0000 00112356788899997665554
Q ss_pred ccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe
Q 000576 321 MIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS 400 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~ 400 (1412)
++.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.+++|++++|+
T Consensus 141 -~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~-~~~tiii~tH~~~~~~~~~d~i~~l~ 218 (265)
T PRK10253 141 -VDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNRE-KGYTLAAVLHDLNQACRYASHLIALR 218 (265)
T ss_pred -cccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4579999999999999999999999999999999999999999999998653 35677778999999999999999999
Q ss_pred CCeEEEecChhhHH
Q 000576 401 DGQIVYQGPREHVL 414 (1412)
Q Consensus 401 ~G~iv~~G~~~~~~ 414 (1412)
+|++++.|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (265)
T PRK10253 219 EGKIVAQGAPKEIV 232 (265)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988764
No 363
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-34 Score=326.64 Aligned_cols=204 Identities=24% Similarity=0.323 Sum_probs=169.4
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC---ccceEEEEcCCCC-cCCCC
Q 000576 167 TILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV---PQRTAAYISQHDV-HIGEM 242 (1412)
Q Consensus 167 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 242 (1412)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999887 799999999875432 2357999999864 67888
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|+++|+.|.....+.. . .+....++.+++.+|+.+..|+.+
T Consensus 100 ~v~~~~~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVP--Y--------------------------------DEMHRRVSEALKQVDMLERADYEP----- 140 (269)
T ss_pred cHHHHHHhhHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCchhhhCCc-----
Confidence 9999998864322110 0 001123456789999987666544
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
+.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+..++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tiiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKS-EHNITIISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCchHHhc-CCEEEEEECC
Confidence 47999999999999999999999999999999999999999999999764 235667778888888875 9999999999
Q ss_pred eEEEecChhhHH
Q 000576 403 QIVYQGPREHVL 414 (1412)
Q Consensus 403 ~iv~~G~~~~~~ 414 (1412)
++++.|+++++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999988874
No 364
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-34 Score=324.02 Aligned_cols=219 Identities=20% Similarity=0.266 Sum_probs=176.6
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--CC-eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT--TG-YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 890 (1412)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 489999998874 2359999999999999999999999999999999999654 21 1479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++.. ...++.++|++|++.+++. ||+||+.+....+. .....+.++.++++++.+++.+....... ....
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLH-TQAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhh-CCcc
Confidence 87642 2345679999999888875 99999987643321 11223344567888999888542111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 231 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GE 231 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 799999999987 57789999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
++..|++
T Consensus 232 i~~~g~~ 238 (259)
T PRK14274 232 LVECNDT 238 (259)
T ss_pred EEEECCH
Confidence 9999985
No 365
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-34 Score=319.73 Aligned_cols=211 Identities=22% Similarity=0.296 Sum_probs=176.0
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++||+++++. + ..|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTP--ASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCeecC
Confidence 578999988741 1 1389999999999999999999999999999997654 4799999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 895 QE-TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 895 ~~-~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
.. ..++.++|++|++.+++.+|+.||+.+..... ... .+..++.++++++.+++.+..+..+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 32 12456899999999999999999997653211 111 1233456889999999987777654 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998754 899999999987 57788999999985 899999885
No 366
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=321.75 Aligned_cols=219 Identities=21% Similarity=0.302 Sum_probs=175.6
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC--C-eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT--G-YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g 890 (1412)
.++++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|...+ . +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 478999998874 13599999999999999999999999999999999996432 1 1479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++.. ...++.++|++|++.+++ .|++||+.+....+.. ....+.++.++++++.+++.+........ ...
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 145 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKK-SAL 145 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhc-CCC
Confidence 87642 134567899999988777 8999999886543211 12233445678888888875311111111 235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14240 146 GLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK-DYTIVIVTHNMQ-QASRISDKTAFFLN-GE 222 (250)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEEeCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999854 899999999986 57788999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
++..|+.
T Consensus 223 i~~~~~~ 229 (250)
T PRK14240 223 IVEFGDT 229 (250)
T ss_pred EEEeCCH
Confidence 9998875
No 367
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-34 Score=329.71 Aligned_cols=219 Identities=20% Similarity=0.314 Sum_probs=176.6
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++... .....+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIIS--ETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEc
Confidence 588999999884210 0013599999999999999999999999999999999997654 479999999875
Q ss_pred Cc--------ccccceEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCC
Q 000576 894 KQ--------ETFARISGYCEQNDIH-SPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN-LLRQALVGLPG 963 (1412)
Q Consensus 894 ~~--------~~~~~~~~yv~Q~~~~-~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~ 963 (1412)
.. ..+++.++|++|++.. ....|++||+.|..... ....++..+.++++++.+++. +..+..
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 31 2345678999998632 23469999998764322 122334445678899999984 455543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
...||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 3479999999999999999999999999999999999999999999998754 899999999987 57889999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 899998875
No 368
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=5.2e-34 Score=319.13 Aligned_cols=203 Identities=32% Similarity=0.525 Sum_probs=164.5
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCC---CCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD---SSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGE 241 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 241 (1412)
.+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3569999999999999999999999999999999999998 65 79999999887543345679999999888999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHH-HHHHhCCCccccccccCc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDY-ILKILGLDVCADTMVGDE 320 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-il~~lgL~~~~dt~vg~~ 320 (1412)
+||+||+.|+......... ... ......+. .++.+++++..++.
T Consensus 96 ~tv~enl~~~~~~~~~~~~---~~~----------------------------~~~~~~~~~~l~~~~l~~~~~~~---- 140 (226)
T cd03234 96 LTVRETLTYTAILRLPRKS---SDA----------------------------IRKKRVEDVLLRDLALTRIGGNL---- 140 (226)
T ss_pred CcHHHHHHHHHHhhccccc---chH----------------------------HHHHHHHHHHHHhhcchhhhccc----
Confidence 9999999987543211000 000 00011233 78888887655544
Q ss_pred ccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCh-hhHHhhcCeEEEE
Q 000576 321 MIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPA-PEAYDLFDDIILI 399 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~-~~~~~~~D~vivL 399 (1412)
++.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.++++.+ . +.+++.++|+. .++.+++|++++|
T Consensus 141 -~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~-~~tiii~sh~~~~~~~~~~d~i~~l 217 (226)
T cd03234 141 -VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-R-NRIVILTIHQPRSDLFRLFDRILLL 217 (226)
T ss_pred -ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCCCHHHHHhCCEEEEE
Confidence 457999999999999999999999999999999999999999999999764 2 45666677776 6899999999999
Q ss_pred eCCeEEEec
Q 000576 400 SDGQIVYQG 408 (1412)
Q Consensus 400 ~~G~iv~~G 408 (1412)
++|+++++|
T Consensus 218 ~~G~i~~~g 226 (226)
T cd03234 218 SSGEIVYSG 226 (226)
T ss_pred eCCEEEecC
Confidence 999999876
No 369
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-34 Score=322.63 Aligned_cols=219 Identities=19% Similarity=0.264 Sum_probs=175.1
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--CC-eEEEEEEEcCc
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT--TG-YVTGNITISGY 891 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g~ 891 (1412)
-+++|+++.++ .+.+|+|+||+|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|.
T Consensus 6 ~~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 72 (251)
T PRK14244 6 ASVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGI 72 (251)
T ss_pred EEeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCE
Confidence 46788888773 2469999999999999999999999999999999999753 11 24799999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCC
Q 000576 892 PKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNG 966 (1412)
Q Consensus 892 ~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~ 966 (1412)
++.. ...++.++|++|++.+++. |++||+.+....+.. .......++.++++++.+++.+........ ....
T Consensus 73 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 149 (251)
T PRK14244 73 DVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHGL-AKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFE 149 (251)
T ss_pred ehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcCCCchhhhHhhc-Chhh
Confidence 7532 1245678999999888875 999999876433311 112233445678899999986522111111 2357
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEE
Q 000576 967 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQE 1046 (1412)
Q Consensus 967 lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~ 1046 (1412)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |++
T Consensus 150 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i 226 (251)
T PRK14244 150 LSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRI 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999985 4899999999987 57788999999985 799
Q ss_pred EEEcCC
Q 000576 1047 IYVGPL 1052 (1412)
Q Consensus 1047 ~y~G~~ 1052 (1412)
++.|+.
T Consensus 227 ~~~~~~ 232 (251)
T PRK14244 227 VEYNTT 232 (251)
T ss_pred EEeCCH
Confidence 998875
No 370
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-34 Score=322.05 Aligned_cols=218 Identities=21% Similarity=0.265 Sum_probs=176.7
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 890 (1412)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 478999998874 235999999999999999999999999999999999965421 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch-hhhcccCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL-LRQALVGLPGV 964 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~ 964 (1412)
.++.. ...++.++|++|++.+++ .|++||+.|....... ....+.++.++++++.+++.+ +.+.. . ...
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~-~-~~~ 145 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDL-K-KSA 145 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHh-h-CCc
Confidence 87642 123567899999988887 8999999876543211 122334456788899998742 11111 1 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
..||+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |
T Consensus 146 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~~-G 222 (251)
T PRK14270 146 LKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFLM-G 222 (251)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999876 689999999986 57888999999985 8
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
++++.|+.
T Consensus 223 ~i~~~~~~ 230 (251)
T PRK14270 223 DLIEFNKT 230 (251)
T ss_pred eEEEeCCH
Confidence 99999986
No 371
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.5e-34 Score=286.30 Aligned_cols=213 Identities=24% Similarity=0.365 Sum_probs=179.0
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.|+.+++++.+... .....||++|++.|++||-+||+|||||||||||-+|+|...+ .+|+|.+.|++.
T Consensus 6 ii~~~~l~ktvg~~---------~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L 74 (228)
T COG4181 6 IIEVHHLSKTVGQG---------EGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPL 74 (228)
T ss_pred eeehhhhhhhhcCC---------CcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcch
Confidence 46788888776432 3567899999999999999999999999999999999997654 479999999986
Q ss_pred Cc---c----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCC
Q 000576 894 KQ---E----TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNG 966 (1412)
Q Consensus 894 ~~---~----~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~ 966 (1412)
.. + -..+.+|+|+|.-.+.|++|..||+.....++.... .+......+.++.+||.+-.+... ..
T Consensus 75 ~~ldEd~rA~~R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~---~~~~~~A~~lL~~vGLg~Rl~HyP-----~q 146 (228)
T COG4181 75 HKLDEDARAALRARHVGFVFQSFHLIPNLTALENVALPLELRGESS---ADSRAGAKALLEAVGLGKRLTHYP-----AQ 146 (228)
T ss_pred hhcCHHHHHHhhccceeEEEEeeeccccchhhhhccchhhhcCCcc---ccHHHHHHHHHHHhCcccccccCc-----cc
Confidence 43 1 234679999999999999999999998888775322 222344677899999987666553 47
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 967 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 967 lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
|||||+|||+||||++..|+|||.||||-+||..|...|.+.+=.+. +.|.|.|++||||. +...|||.+-|.. |+
T Consensus 147 LSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~ 223 (228)
T COG4181 147 LSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GR 223 (228)
T ss_pred cCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ce
Confidence 99999999999999999999999999999999999999999998876 45999999999986 6788999999985 78
Q ss_pred EEE
Q 000576 1046 EIY 1048 (1412)
Q Consensus 1046 ~~y 1048 (1412)
++.
T Consensus 224 l~~ 226 (228)
T COG4181 224 LVE 226 (228)
T ss_pred ecc
Confidence 763
No 372
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-34 Score=327.82 Aligned_cols=211 Identities=24% Similarity=0.364 Sum_probs=172.4
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGE 241 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 241 (1412)
++++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+++.
T Consensus 23 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (265)
T PRK10575 23 GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEG 99 (265)
T ss_pred CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCC
Confidence 346999999999999999999999999999999999999886 7999999987754322 3569999998888889
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
+||+||+.++..... ... +.. . ......++.+++.+||++..++.++
T Consensus 100 ~tv~e~l~~~~~~~~--~~~-------------~~~--~-------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 146 (265)
T PRK10575 100 MTVRELVAIGRYPWH--GAL-------------GRF--G-------------AADREKVEEAISLVGLKPLAHRLVD--- 146 (265)
T ss_pred ccHHHHHHhCccccc--ccc-------------cCC--C-------------HHHHHHHHHHHHHcCCHHHhcCCcc---
Confidence 999999987531100 000 000 0 0011235678889999876666554
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.+++|+|++|++
T Consensus 147 --~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~-~~~tiii~sH~~~~i~~~~d~i~~l~~ 223 (265)
T PRK10575 147 --SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQE-RGLTVIAVLHDINMAARYCDYLVALRG 223 (265)
T ss_pred --cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 69999999999999999999999999999999999999999999998653 356677789999999999999999999
Q ss_pred CeEEEecChhhHH
Q 000576 402 GQIVYQGPREHVL 414 (1412)
Q Consensus 402 G~iv~~G~~~~~~ 414 (1412)
|++++.|+.+++.
T Consensus 224 G~i~~~~~~~~~~ 236 (265)
T PRK10575 224 GEMIAQGTPAELM 236 (265)
T ss_pred CeEEEecCHHHhc
Confidence 9999999887763
No 373
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=321.75 Aligned_cols=219 Identities=22% Similarity=0.308 Sum_probs=176.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 890 (1412)
.++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g 69 (250)
T PRK14262 3 IIEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKG 69 (250)
T ss_pred eEEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478999998874 235899999999999999999999999999999999965421 2579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++.. ...++.++|++|++.+++ .|++||+.+...... .......++.+++.++.+++.+..+.... ....
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 145 (250)
T PRK14262 70 QDIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELN-KPGT 145 (250)
T ss_pred EEcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHh-CChh
Confidence 87642 134567999999988877 899999987654321 11222334557888898888542111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 146 ~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~ 222 (250)
T PRK14262 146 RLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GE 222 (250)
T ss_pred hcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 799999999987 57788999999986 79
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
++..|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14262 223 LIEYGPT 229 (250)
T ss_pred EEEecCH
Confidence 9998875
No 374
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-34 Score=334.78 Aligned_cols=211 Identities=24% Similarity=0.374 Sum_probs=178.4
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++||+++|+.+ ..++|+|+|+++++||++||+|+||||||||++.|+|...+ .+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~--~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDP--QQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCC--CCCeeeECCcCh
Confidence 79999999999743 34699999999999999999999999999999999996554 489999999886
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcc-------cCCCC
Q 000576 894 KQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQAL-------VGLPG 963 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~-------vg~~~ 963 (1412)
.. ...++.++++.|...++ .-|+|+||..+. ++.++ +.+.++++.+||.+..... +|. +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF-~~Tlr~NL~lA~-----~~AsD----Eel~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLF-SGTLRDNLRLAN-----PDASD----EELWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHH-HHHHHHHHhhcC-----CCCCH----HHHHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 43 34667789999966555 569999997642 33343 3478899999998765443 444 4
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
++.||||||||++|||+|++|.++++|||||.|||+.|++.|++.|.+.++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 568999999999999999999999999999999999999999999998764 899999999976 4688999999985
Q ss_pred cEEEEEcCC
Q 000576 1044 GQEIYVGPL 1052 (1412)
Q Consensus 1044 G~~~y~G~~ 1052 (1412)
|+++..|..
T Consensus 548 Gkiie~G~~ 556 (573)
T COG4987 548 GKIIEEGTH 556 (573)
T ss_pred CeeeecCCH
Confidence 899999976
No 375
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-34 Score=319.24 Aligned_cols=204 Identities=27% Similarity=0.445 Sum_probs=172.4
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCCCCHHH
Q 000576 168 ILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTVRE 246 (1412)
Q Consensus 168 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~e 246 (1412)
+|+|+|++|+|||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 899999999999999999999999999999999999987 7999999998765322 467999999988888999999
Q ss_pred HHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCC
Q 000576 247 TLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGIS 326 (1412)
Q Consensus 247 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LS 326 (1412)
|+.++....+... .+....++.+++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK----------------------------------KEIERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9988643221100 001123456788899987776655 4699
Q ss_pred hhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEE
Q 000576 327 GGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVY 406 (1412)
Q Consensus 327 GGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~ 406 (1412)
||||||++||+|++.+|++++|||||+|||+.++..+.+.|++++.. .+++++.++|+.+++.+++|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~-~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKE-FGVTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998653 25677778999999999999999999999999
Q ss_pred ecChhhHH
Q 000576 407 QGPREHVL 414 (1412)
Q Consensus 407 ~G~~~~~~ 414 (1412)
.|+++++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987764
No 376
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=326.05 Aligned_cols=211 Identities=25% Similarity=0.390 Sum_probs=172.3
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIG 240 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 240 (1412)
+++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|+..+++
T Consensus 13 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (255)
T PRK11231 13 GTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPE 89 (255)
T ss_pred CCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCC
Confidence 3456999999999999999999999999999999999999886 7999999987654321 356999999987788
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000576 241 EMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 320 (1412)
Q Consensus 241 ~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 320 (1412)
.+||.||+.++..... ..+. ... .+....++.+++.+||++..++.+
T Consensus 90 ~~tv~~~i~~~~~~~~--~~~~----------------~~~------------~~~~~~~~~~l~~~~l~~~~~~~~--- 136 (255)
T PRK11231 90 GITVRELVAYGRSPWL--SLWG----------------RLS------------AEDNARVNQAMEQTRINHLADRRL--- 136 (255)
T ss_pred CccHHHHHHhccchhh--hhcc----------------CCC------------HHHHHHHHHHHHHcCCHHHHcCCc---
Confidence 8999999988631000 0000 000 001123566888899987666554
Q ss_pred ccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe
Q 000576 321 MIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS 400 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~ 400 (1412)
..|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.. .+++++.++|+..++.+++|++++|+
T Consensus 137 --~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~--~~~tiii~tH~~~~~~~~~d~i~~l~ 212 (255)
T PRK11231 137 --TDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT--QGKTVVTVLHDLNQASRYCDHLVVLA 212 (255)
T ss_pred --ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEECCHHHHHHhcCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 35677778999999999999999999
Q ss_pred CCeEEEecChhhHH
Q 000576 401 DGQIVYQGPREHVL 414 (1412)
Q Consensus 401 ~G~iv~~G~~~~~~ 414 (1412)
+|+++..|+.+++.
T Consensus 213 ~G~i~~~~~~~~~~ 226 (255)
T PRK11231 213 NGHVMAQGTPEEVM 226 (255)
T ss_pred CCeEEEEcCHHHhc
Confidence 99999999987763
No 377
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=332.19 Aligned_cols=218 Identities=17% Similarity=0.191 Sum_probs=172.4
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCC-CceeEEEECCccCCCcCc-------cceEEEEcCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL-RLYGRVTYNGHNMDEFVP-------QRTAAYISQHD 236 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 236 (1412)
...+|+|||++|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++..... ++.++||+|++
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~ 98 (330)
T PRK15093 19 WVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEP 98 (330)
T ss_pred CEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCc
Confidence 3569999999999999999999999999999999999986421 137999999998765432 13699999986
Q ss_pred C--cCCCCCHHHHHHHhhhhcCC-CchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccc
Q 000576 237 V--HIGEMTVRETLAFSARCQGV-GSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCA 313 (1412)
Q Consensus 237 ~--~~~~lTV~e~l~f~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 313 (1412)
. +.+.+||.+++.+....... +..+ . . ..+....+..+|+.+||++..
T Consensus 99 ~~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~--~-----------~~~~~~~~~~~L~~~gL~~~~ 149 (330)
T PRK15093 99 QSCLDPSERVGRQLMQNIPGWTYKGRWW----------------Q--R-----------FGWRKRRAIELLHRVGIKDHK 149 (330)
T ss_pred chhcCccccHHHHHHHHHHhhhcccccc----------------c--c-----------HHHHHHHHHHHHHHCCCCChH
Confidence 4 57889999999764221000 0000 0 0 001123456789999997532
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000576 314 DTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLF 393 (1412)
Q Consensus 314 dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~ 393 (1412)
+ +-++.+..|||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+. .+.++++++|+...+.+++
T Consensus 150 ~--~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~tii~itHdl~~v~~~~ 226 (330)
T PRK15093 150 D--AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQN-NNTTILLISHDLQMLSQWA 226 (330)
T ss_pred H--HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhC
Confidence 1 113445689999999999999999999999999999999999999999999998653 3677888999999999999
Q ss_pred CeEEEEeCCeEEEecChhhHH
Q 000576 394 DDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 394 D~vivL~~G~iv~~G~~~~~~ 414 (1412)
|+|++|++|+|++.|+.+++.
T Consensus 227 dri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 227 DKINVLYCGQTVETAPSKELV 247 (330)
T ss_pred CEEEEEECCEEEEECCHHHHH
Confidence 999999999999999998874
No 378
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-33 Score=318.18 Aligned_cols=212 Identities=27% Similarity=0.403 Sum_probs=178.2
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.+. + .+|+|+|++|+|||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~------------~--~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p--~~G~v~i~g~~~~ 64 (235)
T cd03299 1 LKVENLSKDWK------------E--FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKP--DSGKILLNGKDIT 64 (235)
T ss_pred CeeEeEEEEeC------------C--ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcC
Confidence 35778887763 1 279999999999999999999999999999999997654 4799999998765
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 895 QE-TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 895 ~~-~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
.. ..++.++|++|++.+++.+|+.||+.+..... .....+.++.+.++++.+++.+..+..+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (235)
T cd03299 65 NLPPEKRDISYVPQNYALFPHMTVYKNIAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQ 136 (235)
T ss_pred cCChhHcCEEEEeecCccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHH
Confidence 32 22457899999999999999999998764332 1223344456788999999987766654 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 137 RVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999999999999999999999998764 899999999986 57788999999985 899998875
No 379
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-34 Score=323.15 Aligned_cols=213 Identities=20% Similarity=0.281 Sum_probs=169.6
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCC--CCCCceeEEEECCccCCCc-----CccceEEEEcCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDV 237 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 237 (1412)
++.+|+|+|++|++||+++|+|||||||||||++|+|.++ |+...+|+|.++|+++... ..++.++|++|+..
T Consensus 16 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 95 (252)
T PRK14256 16 KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPN 95 (252)
T ss_pred CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCC
Confidence 4569999999999999999999999999999999999986 3211379999999887432 12467999999988
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
+++.+||+||+.++.+..+.... .+....++.+++.+|+....+...
T Consensus 96 ~~~~~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 142 (252)
T PRK14256 96 PFPAMSIYDNVIAGYKLNGRVNR---------------------------------SEADEIVESSLKRVALWDEVKDRL 142 (252)
T ss_pred CCCcCcHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh
Confidence 88889999999876432110000 001123456788888864221111
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
+..+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +++|++++|+.+++.+++|+++
T Consensus 143 -~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~---~~tiiivsH~~~~~~~~~d~i~ 218 (252)
T PRK14256 143 -KSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE---KYTIIIVTHNMQQAARVSDYTA 218 (252)
T ss_pred -hCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh---CCcEEEEECCHHHHHhhCCEEE
Confidence 234557999999999999999999999999999999999999999999999853 3567778999999999999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000576 398 LISDGQIVYQGPREHVL 414 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~ 414 (1412)
+|++|+++..|+.+++.
T Consensus 219 ~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 219 FFYMGDLVECGETKKIF 235 (252)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988763
No 380
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.78 Aligned_cols=221 Identities=21% Similarity=0.261 Sum_probs=178.6
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 890 (1412)
.++++|+++.++ ...+|+|+|+++++||+++|+|+||||||||+++|+|...+. ..+|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 589999999874 135899999999999999999999999999999999975432 1369999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++.. ...++.++|++|+..+++ .|++||+.+....... ....+..+.++++++.+++.+..+...+. ...
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87531 234567999999988887 8999999876433211 12233345678899999885422222222 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecC-
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRG- 1043 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g- 1043 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ .|+|||+++|++. ++.+.+|++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999865 4899999999987 688899999999853
Q ss_pred ---cEEEEEcCC
Q 000576 1044 ---GQEIYVGPL 1052 (1412)
Q Consensus 1044 ---G~~~y~G~~ 1052 (1412)
|++++.|++
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 899999986
No 381
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=8.5e-34 Score=325.03 Aligned_cols=224 Identities=19% Similarity=0.259 Sum_probs=179.6
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++||+++|+.+.. ....+.+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 77 (267)
T PRK15112 4 LLEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEP--TSGELLIDDHPL 77 (267)
T ss_pred eEEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEC
Confidence 3789999998842100 0000124699999999999999999999999999999999997654 479999999876
Q ss_pred Ccc---cccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCCCCCC
Q 000576 894 KQE---TFARISGYCEQNDI--HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN-LLRQALVGLPGVNGL 967 (1412)
Q Consensus 894 ~~~---~~~~~~~yv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~l 967 (1412)
... ..++.++|++|++. +.+.+|+.|++.+....+. .....+..+.++++++.+++. +..+.. +..|
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~L 150 (267)
T PRK15112 78 HFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHML 150 (267)
T ss_pred CCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhc
Confidence 421 22356899999875 5678899999987654332 122334445688999999994 444443 3479
Q ss_pred CHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEE
Q 000576 968 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQE 1046 (1412)
Q Consensus 968 SgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~ 1046 (1412)
|||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ ++.+.||++++|++ |++
T Consensus 151 S~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i 228 (267)
T PRK15112 151 APGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEV 228 (267)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998764 899999999987 57778999999985 899
Q ss_pred EEEcCC
Q 000576 1047 IYVGPL 1052 (1412)
Q Consensus 1047 ~y~G~~ 1052 (1412)
++.|+.
T Consensus 229 ~~~~~~ 234 (267)
T PRK15112 229 VERGST 234 (267)
T ss_pred EecCCH
Confidence 988875
No 382
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-34 Score=327.42 Aligned_cols=209 Identities=23% Similarity=0.328 Sum_probs=171.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCC-cCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDV-HIGE 241 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 241 (1412)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 358999999999999999999999999999999999998862224999999998764322 357999999863 6778
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
.||+||+.|+.+..+.. .++....++.+++.+||++..++.+
T Consensus 100 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~---- 141 (282)
T PRK13640 100 ATVGDDVAFGLENRAVP----------------------------------RPEMIKIVRDVLADVGMLDYIDSEP---- 141 (282)
T ss_pred CCHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCCc----
Confidence 99999998864322110 0011224566889999987666544
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++ ..+|++++|++
T Consensus 142 -~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~-~~~d~i~~l~~ 218 (282)
T PRK13640 142 -ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKK-NNLTVISITHDIDEA-NMADQVLVLDD 218 (282)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 579999999999999999999999999999999999999999999998653 356777788888887 57999999999
Q ss_pred CeEEEecChhhHHH
Q 000576 402 GQIVYQGPREHVLE 415 (1412)
Q Consensus 402 G~iv~~G~~~~~~~ 415 (1412)
|++++.|+++++.+
T Consensus 219 G~i~~~g~~~~~~~ 232 (282)
T PRK13640 219 GKLLAQGSPVEIFS 232 (282)
T ss_pred CEEEEeCCHHHHhc
Confidence 99999999988753
No 383
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=3.5e-34 Score=317.77 Aligned_cols=197 Identities=23% Similarity=0.386 Sum_probs=163.4
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCc-----CccceEEEEcCCCCc
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 238 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 238 (1412)
+++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+
T Consensus 11 ~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 87 (213)
T cd03262 11 GDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNL 87 (213)
T ss_pred CCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEeccccc
Confidence 3456999999999999999999999999999999999999887 79999999887421 113579999999888
Q ss_pred CCCCCHHHHHHHhhh-hcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 239 IGEMTVRETLAFSAR-CQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
++.+||+||+.++.. .++.. . .+....++.+++.+|+++..++.+
T Consensus 88 ~~~~t~~e~l~~~~~~~~~~~-----------------------~-----------~~~~~~~~~~l~~~~l~~~~~~~~ 133 (213)
T cd03262 88 FPHLTVLENITLAPIKVKGMS-----------------------K-----------AEAEERALELLEKVGLADKADAYP 133 (213)
T ss_pred CCCCcHHHHHHhHHHHhcCCC-----------------------H-----------HHHHHHHHHHHHHcCCHhHhhhCc
Confidence 888999999988642 11100 0 011123456788899987666554
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+++|+.++|+..++.+++|+++
T Consensus 134 -----~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~~tvi~~sh~~~~~~~~~d~i~ 206 (213)
T cd03262 134 -----AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE--EGMTMVVVTHEMGFAREVADRVI 206 (213)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhCCEEE
Confidence 47999999999999999999999999999999999999999999999865 35667778999999999999999
Q ss_pred EEeCCeE
Q 000576 398 LISDGQI 404 (1412)
Q Consensus 398 vL~~G~i 404 (1412)
+|++|++
T Consensus 207 ~l~~g~i 213 (213)
T cd03262 207 FMDDGRI 213 (213)
T ss_pred EEeCCcC
Confidence 9999974
No 384
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-34 Score=321.51 Aligned_cols=215 Identities=17% Similarity=0.264 Sum_probs=169.7
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHI 239 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~ 239 (1412)
++++.+|+|+|+++++||+++|+||||||||||+++|+|.+++....+|+|+++|+++.+... ++.++|++|++.++
T Consensus 12 ~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~ 91 (246)
T PRK14269 12 YGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVF 91 (246)
T ss_pred ECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCccc
Confidence 344569999999999999999999999999999999999975311237999999998765322 35799999987777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
+ .||+||+.++...++... .. ......++.+++.+||........ +
T Consensus 92 ~-~tv~eni~~~~~~~~~~~-------------------~~-------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 137 (246)
T PRK14269 92 V-KSIYENISYAPKLHGMIK-------------------NK-------------DEEEALVVDCLQKVGLFEEVKDKL-K 137 (246)
T ss_pred c-ccHHHHhhhHHhhcCccc-------------------Ch-------------HHHHHHHHHHHHHcCCChhhhHHh-c
Confidence 6 699999998643321100 00 001123456788888853221111 2
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
+..+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++++++++|+.+++.+++|++++|
T Consensus 138 ~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~i~~l 214 (246)
T PRK14269 138 QNALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH---NLSMIMVTHNMQQGKRVADYTAFF 214 (246)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC---CCEEEEEecCHHHHHhhCcEEEEE
Confidence 34567999999999999999999999999999999999999999999998742 567777899999999999999999
Q ss_pred eCCeEEEecChhhHH
Q 000576 400 SDGQIVYQGPREHVL 414 (1412)
Q Consensus 400 ~~G~iv~~G~~~~~~ 414 (1412)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 215 HLGELIEFGESKEFF 229 (246)
T ss_pred ECCEEEEECCHHHHH
Confidence 999999999988764
No 385
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=5.9e-34 Score=324.75 Aligned_cols=210 Identities=28% Similarity=0.432 Sum_probs=172.3
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIG 240 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 240 (1412)
+++.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 12 ~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (256)
T TIGR03873 12 GGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAV 88 (256)
T ss_pred CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCC
Confidence 3456999999999999999999999999999999999999887 7999999998765432 346999999987788
Q ss_pred CCCHHHHHHHhhh-hcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 241 EMTVRETLAFSAR-CQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 241 ~lTV~e~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
.+||+||+.++.. .... + . .+ ..+....++.+++.+|+.+..++.+
T Consensus 89 ~~tv~e~l~~~~~~~~~~---~-------------~-~~--------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (256)
T TIGR03873 89 PLTVRDVVALGRIPHRSL---W-------------A-GD--------------SPHDAAVVDRALARTELSHLADRDM-- 135 (256)
T ss_pred CCCHHHHHHhcchhhhhh---c-------------c-CC--------------CHHHHHHHHHHHHHcCcHhhhcCCc--
Confidence 8999999988521 0000 0 0 00 0011123466788899976666554
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
..||||||||++||+|++.+|++++|||||+|||+.+...+.+.|+++.. .+++|++++|+.+++.+++|+|++|
T Consensus 136 ---~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l 210 (256)
T TIGR03873 136 ---STLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA--TGVTVVAALHDLNLAASYCDHVVVL 210 (256)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999854 3567777899999999999999999
Q ss_pred eCCeEEEecChhhHH
Q 000576 400 SDGQIVYQGPREHVL 414 (1412)
Q Consensus 400 ~~G~iv~~G~~~~~~ 414 (1412)
++|+++..|+.+++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (256)
T TIGR03873 211 DGGRVVAAGPPREVL 225 (256)
T ss_pred eCCCEEEecCHHHhh
Confidence 999999999987763
No 386
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=6.3e-34 Score=314.02 Aligned_cols=189 Identities=24% Similarity=0.380 Sum_probs=160.5
Q ss_pred eeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC---c----ccccceEEEeccCCCCC
Q 000576 840 LVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK---Q----ETFARISGYCEQNDIHS 912 (1412)
Q Consensus 840 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~~yv~Q~~~~~ 912 (1412)
+.+|+|+|+.+++||+++|+||||||||||+++|+|...+ .+|+|.++|.++. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKF--DSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 4699999999999999999999999999999999997654 4799999998743 1 12356799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeC
Q 000576 913 PQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 992 (1412)
Q Consensus 913 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDE 992 (1412)
+.+|++||+.+..... .....+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999998865432 1223344556889999999987666553 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEE
Q 000576 993 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLL 1040 (1412)
Q Consensus 993 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll 1040 (1412)
||+|||+.+...+.+.|+++.++|.|||+++|++. +.+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998777999999999986 34689999875
No 387
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=320.84 Aligned_cols=219 Identities=23% Similarity=0.257 Sum_probs=175.7
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 890 (1412)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 478999998874 245999999999999999999999999999999999975431 2479999999
Q ss_pred ccCCc----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCC
Q 000576 891 YPKKQ----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNG 966 (1412)
Q Consensus 891 ~~~~~----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~ 966 (1412)
.++.. ...++.++|++|++.+++ .||.||+.+...... .......++.++++++.+++.+........ ....
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKS-HAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhc-Cccc
Confidence 87531 234567999999988887 899999987643221 111223345577788888875321111111 1357
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEE
Q 000576 967 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQE 1046 (1412)
Q Consensus 967 lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~ 1046 (1412)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 689999999986 57888999999985 899
Q ss_pred EEEcCC
Q 000576 1047 IYVGPL 1052 (1412)
Q Consensus 1047 ~y~G~~ 1052 (1412)
+..|+.
T Consensus 223 ~~~g~~ 228 (249)
T PRK14253 223 VEHDDT 228 (249)
T ss_pred EEeCCH
Confidence 999875
No 388
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-34 Score=322.44 Aligned_cols=212 Identities=23% Similarity=0.337 Sum_probs=166.5
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCC--CCCCceeEEEECCccCCCc-----CccceEEEEcCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDV 237 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 237 (1412)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.
T Consensus 17 ~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 96 (252)
T PRK14239 17 KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPN 96 (252)
T ss_pred CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCc
Confidence 3469999999999999999999999999999999999853 4212379999999887431 12457999999877
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
.++ +||+||+.++....+... + ......++.+++.+|+.....+..
T Consensus 97 ~~~-~tv~enl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 142 (252)
T PRK14239 97 PFP-MSIYENVVYGLRLKGIKD--K-------------------------------QVLDEAVEKSLKGASIWDEVKDRL 142 (252)
T ss_pred cCc-CcHHHHHHHHHHHcCCCc--H-------------------------------HHHHHHHHHHHHHcCCchhHHHHH
Confidence 666 899999998653322100 0 001122345677777643211111
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
++.+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ +++|+.++|+.+++.+++|+++
T Consensus 143 -~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tii~~sH~~~~~~~~~d~i~ 218 (252)
T PRK14239 143 -HDSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD---DYTMLLVTRSMQQASRISDRTG 218 (252)
T ss_pred -hcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh---CCeEEEEECCHHHHHHhCCEEE
Confidence 234557999999999999999999999999999999999999999999999743 3567778999999999999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000576 398 LISDGQIVYQGPREHVL 414 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~ 414 (1412)
+|++|++++.|+.+++.
T Consensus 219 ~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 219 FFLDGDLIEYNDTKQMF 235 (252)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999998874
No 389
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=323.35 Aligned_cols=220 Identities=21% Similarity=0.262 Sum_probs=177.6
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC---CeEEEEEEEc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT---GYVTGNITIS 889 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 889 (1412)
..++++|+++.++ ++.+|+|+|+.|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++
T Consensus 24 ~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~ 90 (272)
T PRK14236 24 TALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLD 90 (272)
T ss_pred cEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEEC
Confidence 3689999999874 23589999999999999999999999999999999997542 1257999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCC
Q 000576 890 GYPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGV 964 (1412)
Q Consensus 890 g~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~ 964 (1412)
|.+... ..+++.++|++|+..+++. |++||+.+...... .......++.++++++.+++.+......+. ..
T Consensus 91 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~ 166 (272)
T PRK14236 91 GQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHE-NA 166 (272)
T ss_pred CEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhC-Cc
Confidence 987642 1345679999999888876 99999987654321 111223345678888988885421111111 23
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|+++ ++.+.+|++++|++ |
T Consensus 167 ~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G 243 (272)
T PRK14236 167 FGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM-G 243 (272)
T ss_pred ccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999976 799999999986 57788999999985 8
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
+++..|+.
T Consensus 244 ~i~~~g~~ 251 (272)
T PRK14236 244 KLVEYGDT 251 (272)
T ss_pred EEEecCCH
Confidence 99999875
No 390
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=322.19 Aligned_cols=220 Identities=21% Similarity=0.285 Sum_probs=177.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC-e--EEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG-Y--VTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~--~~G~i~i~g 890 (1412)
.++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 588999998874 235999999999999999999999999999999999965432 1 479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++.. ...++.++|++|++.+++ .||+||+.+....+. .....+.++.++++++.+++......... ....
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 149 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLN-KSAL 149 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhc-CCcc
Confidence 87632 234557999999988887 899999987654332 11223334567788898888421111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec---
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR--- 1042 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~--- 1042 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+.
T Consensus 150 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~~~~~ 227 (259)
T PRK14260 150 GLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFSTDES 227 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEeccCC
Confidence 7999999999999999999999999999999999999999999999865 699999999987 68889999999973
Q ss_pred -CcEEEEEcCC
Q 000576 1043 -GGQEIYVGPL 1052 (1412)
Q Consensus 1043 -gG~~~y~G~~ 1052 (1412)
.|++++.|+.
T Consensus 228 ~~G~i~~~~~~ 238 (259)
T PRK14260 228 RIGQMVEFGVT 238 (259)
T ss_pred CCceEEEeCCH
Confidence 4899999986
No 391
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=320.37 Aligned_cols=220 Identities=24% Similarity=0.274 Sum_probs=175.3
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCe---EEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGY---VTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~---~~G~i~i~g 890 (1412)
.++++|+++.++ ++.+|+|+|+.|++||+++|+|+||||||||+++|+|...+.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 478899998874 2469999999999999999999999999999999999754322 379999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++.. ..+++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.+++......... ....
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 147 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLK-TPAT 147 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhc-CCcc
Confidence 87642 1345678999999999999999999987643321 11222334456667777766421111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|++ |+
T Consensus 148 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14272 148 GLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFLV-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999864 799999999987 57778999999985 79
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
+++.|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14272 225 LVEHGPT 231 (252)
T ss_pred EEEeCCH
Confidence 9999885
No 392
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-33 Score=313.89 Aligned_cols=191 Identities=23% Similarity=0.386 Sum_probs=162.2
Q ss_pred ceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000576 845 SVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQ-------ETFARISGYCEQNDIHSPQVTV 917 (1412)
Q Consensus 845 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~yv~Q~~~~~~~lTv 917 (1412)
|+|+++++ |+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKP--DGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 99999999999999999999997654 47999999987531 1235678999999988899999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000576 918 YESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 997 (1412)
Q Consensus 918 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgL 997 (1412)
+||+.+..... .....++.++++++.+++.+..+.. ...||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 1223345678899999998765544 3479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 998 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 998 D~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
|+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999765 899999999986 47788999999985 7888765
No 393
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-34 Score=335.76 Aligned_cols=190 Identities=24% Similarity=0.380 Sum_probs=166.2
Q ss_pred ceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000576 845 SVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQ-------ETFARISGYCEQNDIHSPQVTV 917 (1412)
Q Consensus 845 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~yv~Q~~~~~~~lTv 917 (1412)
|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+... ...++.++|++|+..++|.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRP--QKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 89999999999999999999999999999997654 47999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000576 918 YESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 997 (1412)
Q Consensus 918 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgL 997 (1412)
+||+.|... ...++.++++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 112345789999999987776653 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 998 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 998 D~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|+.++..+++.|+++.++ |+|||++||+++ ++.+++|++++|++ |+++..|++
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999998765 899999999986 68889999999985 899999986
No 394
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-34 Score=324.06 Aligned_cols=213 Identities=21% Similarity=0.321 Sum_probs=168.5
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCC--CceeEEEECCccCCCc-----CccceEEEEcCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL--RLYGRVTYNGHNMDEF-----VPQRTAAYISQHDV 237 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 237 (1412)
++++|+|+|++|++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|+++... ..++.++|++|++.
T Consensus 16 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 95 (258)
T PRK14241 16 SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPN 95 (258)
T ss_pred CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccc
Confidence 3469999999999999999999999999999999999986410 1379999999886421 12357999999988
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
+++.+||+||+.++....+...+ +.....++.+++.+||........
T Consensus 96 ~~~~~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 142 (258)
T PRK14241 96 PFPTMSIRDNVVAGLKLNGVRNK---------------------------------KDLDELVEKSLRGANLWNEVKDRL 142 (258)
T ss_pred cCCCCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh
Confidence 88899999999886532210000 001123456788888742111111
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
+..+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ +++|+.++|+..++.+++|+++
T Consensus 143 -~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tviivsH~~~~~~~~~d~i~ 218 (258)
T PRK14241 143 -DKPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ---DYTIVIVTHNMQQAARVSDQTA 218 (258)
T ss_pred -hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEecCHHHHHHhCCEEE
Confidence 234457999999999999999999999999999999999999999999999843 3567778999999999999999
Q ss_pred EEe------CCeEEEecChhhHH
Q 000576 398 LIS------DGQIVYQGPREHVL 414 (1412)
Q Consensus 398 vL~------~G~iv~~G~~~~~~ 414 (1412)
+|+ +|++++.|+++++.
T Consensus 219 ~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 219 FFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEecccCCCCceEEecCCHHHHH
Confidence 997 79999999988774
No 395
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3e-34 Score=301.94 Aligned_cols=216 Identities=21% Similarity=0.332 Sum_probs=192.4
Q ss_pred hhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCC
Q 000576 157 NILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHD 236 (1412)
Q Consensus 157 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d 236 (1412)
+.++++++++.+++|+||.++||++.+++|||||||||.+++|+|++.|+ +|+|+++|.+++... ..+|||.|.+.
T Consensus 6 e~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEER 81 (300)
T COG4152 6 EGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEER 81 (300)
T ss_pred ecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhh
Confidence 35677889999999999999999999999999999999999999999997 899999999886543 35799999999
Q ss_pred CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccc
Q 000576 237 VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 316 (1412)
Q Consensus 237 ~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 316 (1412)
-+++.+||.|.|.|-++++|+.. ++.....+.+|+.+++......+
T Consensus 82 GLy~k~tv~dql~yla~LkGm~~----------------------------------~e~~~~~~~wLer~~i~~~~~~k 127 (300)
T COG4152 82 GLYPKMTVEDQLKYLAELKGMPK----------------------------------AEIQKKLQAWLERLEIVGKKTKK 127 (300)
T ss_pred ccCccCcHHHHHHHHHHhcCCcH----------------------------------HHHHHHHHHHHHhccccccccch
Confidence 99999999999999999988632 12344567889999998766544
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
+..||-|.+|++.+-.+++++|++++||||+|||||.++..+-+.+.++.. .|+||+..+|.++.+.++||++
T Consensus 128 -----Ik~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~--~GatIifSsH~Me~vEeLCD~l 200 (300)
T COG4152 128 -----IKELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKE--EGATIIFSSHRMEHVEELCDRL 200 (300)
T ss_pred -----HHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHh--cCCEEEEecchHHHHHHHhhhh
Confidence 457999999999999999999999999999999999999999999999864 5788888999999999999999
Q ss_pred EEEeCCeEEEecChhhHHHHH
Q 000576 397 ILISDGQIVYQGPREHVLEFF 417 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~~~f 417 (1412)
++|++|+.|.+|+.+++..-|
T Consensus 201 lmL~kG~~V~~G~v~~ir~~~ 221 (300)
T COG4152 201 LMLKKGQTVLYGTVEDIRRSF 221 (300)
T ss_pred heecCCceEEeccHHHHHHhc
Confidence 999999999999999998644
No 396
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=9.6e-34 Score=317.59 Aligned_cols=197 Identities=28% Similarity=0.390 Sum_probs=162.9
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-------cceEEEEcCCCCcC
Q 000576 167 TILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-------QRTAAYISQHDVHI 239 (1412)
Q Consensus 167 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~~ 239 (1412)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 5999999999999999999999999999999999999887 7999999998765432 24699999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000576 240 GEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 319 (1412)
Q Consensus 240 ~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 319 (1412)
+.+||+||+.+.....+... .+....++.+++.+||++..+..+
T Consensus 101 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 144 (228)
T PRK10584 101 PTLNALENVELPALLRGESS----------------------------------RQSRNGAKALLEQLGLGKRLDHLP-- 144 (228)
T ss_pred CCcCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCh--
Confidence 88999999988643221000 011223566889999987666554
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++ +.+|++++|
T Consensus 145 ---~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~-~~~d~i~~l 219 (228)
T PRK10584 145 ---AQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNRE-HGTTLILVTHDLQLA-ARCDRRLRL 219 (228)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998653 355666688888877 559999999
Q ss_pred eCCeEEEe
Q 000576 400 SDGQIVYQ 407 (1412)
Q Consensus 400 ~~G~iv~~ 407 (1412)
++|++++.
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99999753
No 397
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-34 Score=322.57 Aligned_cols=212 Identities=20% Similarity=0.287 Sum_probs=168.4
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcC---CCCCCCceeEEEECCccCCCcC-----ccceEEEEcCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGK---LDSSLRLYGRVTYNGHNMDEFV-----PQRTAAYISQH 235 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~---~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~ 235 (1412)
+.+++|+|+|+++++|++++|+||||||||||+++|+|. .++. ..+|+|.++|+++.... .++.++|++|+
T Consensus 14 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~ 92 (250)
T PRK14245 14 GDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQR 92 (250)
T ss_pred CCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecC
Confidence 345699999999999999999999999999999999997 3331 13799999999875421 13579999998
Q ss_pred CCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccc
Q 000576 236 DVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADT 315 (1412)
Q Consensus 236 d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 315 (1412)
+..++ .||+||+.++.+..+.... ......++++++.+||.+..++
T Consensus 93 ~~~~~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~ 138 (250)
T PRK14245 93 PNPFP-KSIFENVAYGLRVNGVKDN---------------------------------AFIRQRVEETLKGAALWDEVKD 138 (250)
T ss_pred CccCc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCcchhh
Confidence 77776 6999999886533211000 0011234667888888653222
Q ss_pred cccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000576 316 MVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDD 395 (1412)
Q Consensus 316 ~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~ 395 (1412)
.. ++.++.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +++|+.++|+..++.+++|+
T Consensus 139 ~~-~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~ 214 (250)
T PRK14245 139 KL-KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK---DYTIVIVTHNMQQAARVSDK 214 (250)
T ss_pred hh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHhhCCE
Confidence 22 234557999999999999999999999999999999999999999999999742 46677789999999999999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000576 396 IILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 396 vivL~~G~iv~~G~~~~~~ 414 (1412)
+++|++|++++.|+++++.
T Consensus 215 v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 215 TAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998874
No 398
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=9.2e-34 Score=317.87 Aligned_cols=207 Identities=22% Similarity=0.286 Sum_probs=168.1
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCC----CCCceeEEEECCccCCCcCcc-ceEEEEcCCCC--cCC
Q 000576 168 ILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDS----SLRLYGRVTYNGHNMDEFVPQ-RTAAYISQHDV--HIG 240 (1412)
Q Consensus 168 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~--~~~ 240 (1412)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++.....+ +.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999987 5 79999999987654322 57999999864 456
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000576 241 EMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 320 (1412)
Q Consensus 241 ~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 320 (1412)
.+|+.|++.+.....+.. . .+....++.+++.+||++. +...++
T Consensus 78 ~~t~~~~~~~~~~~~~~~---------~-------------------------~~~~~~~~~~l~~~~l~~~--~~~~~~ 121 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKL---------S-------------------------KQARALILEALEAVGLPDP--EEVLKK 121 (230)
T ss_pred ccCHHHHHHHHHHHcCcc---------H-------------------------HHHHHHHHHHHHHcCCCch--HHHHhC
Confidence 789999998754321100 0 0112235678899999742 011133
Q ss_pred ccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEe
Q 000576 321 MIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILIS 400 (1412)
Q Consensus 321 ~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~ 400 (1412)
.+..|||||||||+||++|+.+|++|+|||||+|||..+...+.+.|+++++. .+++|+.++|+.+++..++|++++|+
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQL-FGTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 44579999999999999999999999999999999999999999999998653 35677778999999999999999999
Q ss_pred CCeEEEecChhhHH
Q 000576 401 DGQIVYQGPREHVL 414 (1412)
Q Consensus 401 ~G~iv~~G~~~~~~ 414 (1412)
+|+++..|+++++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999988774
No 399
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=7.2e-34 Score=318.46 Aligned_cols=202 Identities=26% Similarity=0.346 Sum_probs=166.7
Q ss_pred eeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCccceEEEEcCCCCcCCCCCHHHHH
Q 000576 169 LKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQRTAAYISQHDVHIGEMTVRETL 248 (1412)
Q Consensus 169 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~e~l 248 (1412)
|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999887 7999999998765332 348999998888889999999
Q ss_pred HHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChh
Q 000576 249 AFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGG 328 (1412)
Q Consensus 249 ~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGG 328 (1412)
.++....... . + ..+....++.+++.+||++..++.++ .||||
T Consensus 76 ~~~~~~~~~~--~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPD--L-------------------S-----------KSERRAIVEEHIALVGLTEAADKRPG-----QLSGG 118 (230)
T ss_pred HHHHHhcccC--C-------------------C-----------HHHHHHHHHHHHHHcCCHHHHcCChh-----hCCHH
Confidence 8863210000 0 0 00111234668889999876666554 69999
Q ss_pred hhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEEec
Q 000576 329 QRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVYQG 408 (1412)
Q Consensus 329 qkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G 408 (1412)
||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+.+|+.++|+.+++.+++|++++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEE-HRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 999999999999999999999999999999999999999998653 3567777899999999999999999999999988
Q ss_pred ChhhH
Q 000576 409 PREHV 413 (1412)
Q Consensus 409 ~~~~~ 413 (1412)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65543
No 400
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=321.47 Aligned_cols=211 Identities=19% Similarity=0.267 Sum_probs=166.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCC--CCCCceeEEEECCccCCCc-----CccceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 238 (1412)
.++|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|++.+
T Consensus 26 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 105 (260)
T PRK10744 26 FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTP 105 (260)
T ss_pred eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCcc
Confidence 359999999999999999999999999999999999986 2111379999999887421 123579999998777
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++ +||+||+.++.+....... .+....++.+++.+|+........
T Consensus 106 ~~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 150 (260)
T PRK10744 106 FP-MSIYDNIAFGVRLFEKLSR---------------------------------AEMDERVEWALTKAALWNEVKDKL- 150 (260)
T ss_pred Cc-CcHHHHHhhhHhhcCCCCH---------------------------------HHHHHHHHHHHHHcCCChhhHHHH-
Confidence 76 8999999886532110000 001123456788888743211111
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
++....||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.. +++|+.++|+..++.+++|++++
T Consensus 151 ~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~---~~tiii~sH~~~~~~~~~d~i~~ 227 (260)
T PRK10744 151 HQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ---DYTVVIVTHNMQQAARCSDYTAF 227 (260)
T ss_pred hcCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCCEEEE
Confidence 233457999999999999999999999999999999999999999999999842 45677789999999999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000576 399 ISDGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~ 414 (1412)
|++|+++..|+.+++.
T Consensus 228 l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 228 MYLGELIEFGNTDTIF 243 (260)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 401
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-34 Score=329.92 Aligned_cols=205 Identities=19% Similarity=0.301 Sum_probs=167.2
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCC----c----CccceEEEEcCCCC-
Q 000576 167 TILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDE----F----VPQRTAAYISQHDV- 237 (1412)
Q Consensus 167 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----~----~~~~~~~yv~Q~d~- 237 (1412)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 5999999999999999999999999999999999999886 7999999987642 1 12357999999863
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC-cccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD-VCADTM 316 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 316 (1412)
.+...||+||+.|+....+... .+....++.+++.+||+ +..++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGENK----------------------------------QEAYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhHhcCC
Confidence 2345699999998643211100 00112345678888995 445544
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.+++|++
T Consensus 148 -----~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 148 -----PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKE-YKKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred -----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEE
Confidence 3479999999999999999999999999999999999999999999998653 3567777899999999999999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000576 397 ILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~ 414 (1412)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 402
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-34 Score=324.62 Aligned_cols=212 Identities=21% Similarity=0.307 Sum_probs=167.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCC--CCceeEEEECCccCCCc-----CccceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 238 (1412)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|. ...+|+|+++|+++... ..++.++|++|++..
T Consensus 32 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 111 (267)
T PRK14235 32 KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNP 111 (267)
T ss_pred EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCC
Confidence 45999999999999999999999999999999999998741 01379999999887531 123579999998777
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++ .||+||+.++.+..+.... + .+....++.+++.+||.+......
T Consensus 112 ~~-~tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 157 (267)
T PRK14235 112 FP-KSIYENVAYGPRIHGLARS--------K------------------------AELDEIVETSLRKAGLWEEVKDRL- 157 (267)
T ss_pred CC-CcHHHHHHHHHHhcccccc--------h------------------------HHHHHHHHHHHHHcCCchhhhHHh-
Confidence 76 4999999987543211000 0 001123456788888864221111
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
++.++.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.+|++++|+.+++.+++|++++
T Consensus 158 ~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~---~~tiiivtH~~~~~~~~~d~v~~ 234 (267)
T PRK14235 158 HEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ---NYTIVIVTHSMQQAARVSQRTAF 234 (267)
T ss_pred hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc---CCeEEEEEcCHHHHHhhCCEEEE
Confidence 233557999999999999999999999999999999999999999999999853 35677789999999999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000576 399 ISDGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~ 414 (1412)
|++|+++.+|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 235 FHLGNLVEVGDTEKMF 250 (267)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988763
No 403
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4e-34 Score=364.57 Aligned_cols=210 Identities=24% Similarity=0.398 Sum_probs=175.2
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++||++.+. +++.+|+|+|++|+|||++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3699999997553 1246899999999999999999999999999999999976 4 37999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchh-------hhcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLL-------RQALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~ 962 (1412)
+.+ ..+++.++||+|++.++. -|++||+.++. ++.++ +.++++++..++.+. .|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 654 456788999999998876 49999998752 23333 335667777666543 35667755
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
| .+||||||||++|||||+++|+||+||||||+||+.++..|++.|+++. +++|+|+++|+++ ..+.+|++++|++
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 4 5799999999999999999999999999999999999999999999885 5899999999985 4678999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|+++..|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 899998873
No 404
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.3e-32 Score=355.12 Aligned_cols=211 Identities=24% Similarity=0.377 Sum_probs=176.3
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++||+|+|+. ++.+|+|+|++|+|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 472 ~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p--~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQA--RSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEECCEE
Confidence 36999999999851 23589999999999999999999999999999999997664 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh-------hcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR-------QALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~vg~~ 962 (1412)
+++ ..+++.+|||+|++.+++. |++||+.+.. .++.++ +.++++++..++.+.. |+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~----~~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGA----KENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehhH-HHHHHHhccC----CCCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 643 4567889999999988765 9999997642 112232 3356777777765432 5566654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
+.+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999985 4799999999986 4678999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|+++..|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 899999984
No 405
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.2e-33 Score=318.35 Aligned_cols=208 Identities=26% Similarity=0.400 Sum_probs=173.3
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 242 (1412)
+.+++|+|+|+++.+||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 11 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 87 (237)
T TIGR00968 11 GSFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHL 87 (237)
T ss_pred CCeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCC
Confidence 3456999999999999999999999999999999999999886 7999999998764333 35799999998888889
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|++||+.+..+..+... .......+.+++.+++....|+.+
T Consensus 88 t~~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 128 (237)
T TIGR00968 88 TVRDNIAFGLEIRKHPK----------------------------------AKIKARVEELLELVQLEGLGDRYP----- 128 (237)
T ss_pred cHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCh-----
Confidence 99999988654321100 000112456788889876665544
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
+.||||||||++||++|+.+|++++|||||+|||..+...+.+.|++++.. .+.+++.++|..+++.+++|++++|++|
T Consensus 129 ~~lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~-~~~tvli~sH~~~~~~~~~d~i~~l~~g 207 (237)
T TIGR00968 129 NQLSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDE-VHVTTVFVTHDQEEAMEVADRIVVMSNG 207 (237)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCEEEEEECC
Confidence 469999999999999999999999999999999999999999999987652 3566777889999999999999999999
Q ss_pred eEEEecChhhHH
Q 000576 403 QIVYQGPREHVL 414 (1412)
Q Consensus 403 ~iv~~G~~~~~~ 414 (1412)
++++.|+.+++.
T Consensus 208 ~i~~~~~~~~~~ 219 (237)
T TIGR00968 208 KIEQIGSPDEVY 219 (237)
T ss_pred EEEEecCHHHHH
Confidence 999999988774
No 406
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1e-33 Score=360.59 Aligned_cols=213 Identities=23% Similarity=0.316 Sum_probs=177.8
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++||+|+|+. ..+.+|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEE
Confidence 36999999999852 124699999999999999999999999999999999997665 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchh-------hhcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLL-------RQALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~ 962 (1412)
.++ ..+++.++|++|++.+++ -|++||+.++. +.+.++ +.++++++..++.+. .|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~~----~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYSR----EQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCCH----HHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 654 456788999999998886 59999997641 112232 346777777776543 35566654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
.++||||||||++|||+|+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.||+|++|++
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999875 4799999999985 5778999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|+++..|+.
T Consensus 554 -g~i~e~g~~ 562 (582)
T PRK11176 554 -GEIVERGTH 562 (582)
T ss_pred -CEEEEeCCH
Confidence 899999984
No 407
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=318.05 Aligned_cols=201 Identities=24% Similarity=0.416 Sum_probs=169.0
Q ss_pred ceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-cceEEEEcCCCCcCCCCCHHHHHH
Q 000576 171 GVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-QRTAAYISQHDVHIGEMTVRETLA 249 (1412)
Q Consensus 171 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~e~l~ 249 (1412)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999887 7999999998754322 357999999988888899999998
Q ss_pred HhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChhh
Q 000576 250 FSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGGQ 329 (1412)
Q Consensus 250 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGGq 329 (1412)
++... ... .. ......++.+++.+||++..|+.+. .|||||
T Consensus 94 ~~~~~-~~~--~~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLK--LN-------------------------------AAQREKLHAIARQMGIEDLLARLPG-----QLSGGQ 134 (232)
T ss_pred ccccc-ccC--CC-------------------------------HHHHHHHHHHHHHcCcHHHHhCCcc-----cCCHHH
Confidence 75321 000 00 0011235668899999876666554 699999
Q ss_pred hhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEEecC
Q 000576 330 RKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVYQGP 409 (1412)
Q Consensus 330 kqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~~G~ 409 (1412)
|||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+. .+++++.++|+..++.+++|++++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQE-RQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998653 35667778999999999999999999999999999
Q ss_pred hhhHH
Q 000576 410 REHVL 414 (1412)
Q Consensus 410 ~~~~~ 414 (1412)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 88774
No 408
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.9e-33 Score=320.03 Aligned_cols=214 Identities=20% Similarity=0.264 Sum_probs=174.9
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC--eEEEEEEEcC
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG--YVTGNITISG 890 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~--~~~G~i~i~g 890 (1412)
..++++|++++++ +.+|+|+|+++++||+++|+|+||||||||+++|+|...+. ..+|+|.++|
T Consensus 3 ~~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 4689999998772 24899999999999999999999999999999999976541 1579999999
Q ss_pred ccCCcccc-cceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchh---hhcccCCCCC
Q 000576 891 YPKKQETF-ARISGYCEQNDI--HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLL---RQALVGLPGV 964 (1412)
Q Consensus 891 ~~~~~~~~-~~~~~yv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~---~~~~vg~~~~ 964 (1412)
.++..... ++.++|++|++. +.+..|+.+++.+.+..... .. .++.++++++.+++.+. .+.. .
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~ 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALGK---PA--DDATLTAALEAVGLENAARVLKLY-----P 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcCC---Ch--HHHHHHHHHHHcCCCChhhhhhcC-----C
Confidence 87653322 356999999974 45678999988664432211 11 22557889999999762 2332 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~- 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH- 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998764 899999999987 57788999999985
Q ss_pred cEEEEEcCC
Q 000576 1044 GQEIYVGPL 1052 (1412)
Q Consensus 1044 G~~~y~G~~ 1052 (1412)
|++++.|+.
T Consensus 217 G~i~~~~~~ 225 (254)
T PRK10418 217 GRIVEQGDV 225 (254)
T ss_pred CEEEEecCH
Confidence 899999885
No 409
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=323.16 Aligned_cols=211 Identities=20% Similarity=0.302 Sum_probs=168.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCC--CCceeEEEECCccCCCc-----CccceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 238 (1412)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 45999999999999999999999999999999999998641 12379999999987532 124579999998777
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++ .||+||+.++.+..+...+ ++....++.+++.+||.++.+...
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~i~~~~- 157 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKDK---------------------------------KVLDEIVETSLKQAALWDQVKDDL- 157 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCchhhhhh-
Confidence 76 6999999986432211000 011123456788888864332222
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
++.++.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.+ +.+|+.++|+.+++.+++|++++
T Consensus 158 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~i~~ 234 (267)
T PRK14237 158 HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK---NYTIIIVTHNMQQAARASDYTAF 234 (267)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEecCHHHHHHhcCEEEE
Confidence 345668999999999999999999999999999999999999999999999742 46777788999999999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000576 399 ISDGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~ 414 (1412)
|++|++++.|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999998874
No 410
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.1e-33 Score=335.70 Aligned_cols=194 Identities=25% Similarity=0.391 Sum_probs=168.0
Q ss_pred ceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000576 845 SVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQ-------ETFARISGYCEQNDIHSPQVTV 917 (1412)
Q Consensus 845 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~~yv~Q~~~~~~~lTv 917 (1412)
|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRP--DEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 89999999999999999999999999999997654 47999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCC
Q 000576 918 YESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 997 (1412)
Q Consensus 918 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgL 997 (1412)
+||+.|..... ...+.++.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 12234456889999999987776653 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 998 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 998 D~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|+.++..+.+.|+++.++ |+|||++||+++ ++..++|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999998765 899999999987 67888999999985 899999985
No 411
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=320.98 Aligned_cols=212 Identities=20% Similarity=0.317 Sum_probs=167.5
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCC--CCceeEEEECCccCCCcC-----ccceEEEEcCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRLYGRVTYNGHNMDEFV-----PQRTAAYISQHDV 237 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~ 237 (1412)
++.+|+|+|++|++||+++|+|||||||||||++|+|..+|. ...+|+|.++|+++.... .++.++|++|++.
T Consensus 16 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 95 (251)
T PRK14270 16 EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPN 95 (251)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCC
Confidence 356999999999999999999999999999999999998651 113799999999875321 2356999999887
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
+++ +||+||+.|+....+.... .+....++.+++.+||........
T Consensus 96 ~~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 141 (251)
T PRK14270 96 PFP-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDDL 141 (251)
T ss_pred cCC-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh
Confidence 776 8999999986543221000 001122445677887742111111
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
+..++.||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.+ + .++++++|+..++.+++|+++
T Consensus 142 -~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d~v~ 217 (251)
T PRK14270 142 -KKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSDYTA 217 (251)
T ss_pred -hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcCEEE
Confidence 234557999999999999999999999999999999999999999999999754 3 567778899999999999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000576 398 LISDGQIVYQGPREHVL 414 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~ 414 (1412)
+|++|++++.|+.+++.
T Consensus 218 ~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 218 FFLMGDLIEFNKTEKIF 234 (251)
T ss_pred EEECCeEEEeCCHHHHh
Confidence 99999999999998874
No 412
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=4.5e-34 Score=388.43 Aligned_cols=213 Identities=22% Similarity=0.352 Sum_probs=170.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCC---------------------------------------
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--------------------------------------- 206 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--------------------------------------- 206 (1412)
.++|+|+|++|+||+.+||+||+|||||||+++|+|+++|+
T Consensus 1181 ~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 (1466)
T PTZ00265 1181 VPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSL 1260 (1466)
T ss_pred CccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999999982
Q ss_pred ------------CCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHH
Q 000576 207 ------------LRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARRE 271 (1412)
Q Consensus 207 ------------~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e 271 (1412)
...+|+|++||+++.+... ++.++||+|++.+ ++.||||||.++..
T Consensus 1261 ~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~L-F~gTIreNI~~g~~------------------ 1321 (1466)
T PTZ00265 1261 TKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPML-FNMSIYENIKFGKE------------------ 1321 (1466)
T ss_pred ccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcc-ccccHHHHHhcCCC------------------
Confidence 0138999999999987654 5789999997654 57899999999732
Q ss_pred HHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCC
Q 000576 272 KAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEI 351 (1412)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEP 351 (1412)
+.+.++..+++... ...|.+. .|++.+||.||+++. .||||||||++|||||+++|+||+||||
T Consensus 1322 -------~at~eeI~~A~k~A-----~l~~fI~---~LP~GydT~VGe~G~-~LSGGQkQRIaIARALlr~p~ILLLDEa 1385 (1466)
T PTZ00265 1322 -------DATREDVKRACKFA-----AIDEFIE---SLPNKYDTNVGPYGK-SLSGGQKQRIAIARALLREPKILLLDEA 1385 (1466)
T ss_pred -------CCCHHHHHHHHHHc-----CCHHHHH---hCccccCCccCCCCC-cCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 11112222222111 1123332 489999999998766 6999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC----CeEE-EecChhhHHH
Q 000576 352 STGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD----GQIV-YQGPREHVLE 415 (1412)
Q Consensus 352 tsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~----G~iv-~~G~~~~~~~ 415 (1412)
||+||+.++..|.+.|+++.. .++.|+|+++|... ..+.+|+|++|++ |+++ ++|+++++++
T Consensus 1386 TSaLD~~sE~~I~~~L~~~~~-~~~~TvIiIaHRls-ti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1386 TSSLDSNSEKLIEKTIVDIKD-KADKTIITIAHRIA-SIKRSDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred ccccCHHHHHHHHHHHHHHhc-cCCCEEEEEechHH-HHHhCCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 999999999999999998642 23456666777774 4577999999999 9955 8999999863
No 413
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.1e-33 Score=324.01 Aligned_cols=207 Identities=21% Similarity=0.262 Sum_probs=170.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCC--cCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDV--HIG 240 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 240 (1412)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +.+
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999987 7999999988753221 246999999864 567
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC-ccccccccC
Q 000576 241 EMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD-VCADTMVGD 319 (1412)
Q Consensus 241 ~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~vg~ 319 (1412)
.+||.|++.+..+...... ..+....++.+++.+||+ +..++.
T Consensus 103 ~~tv~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 146 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLE---------------------------------PEQREKQIIETLRQVGLLPDHASYY--- 146 (267)
T ss_pred chhHHHHHHHHHHhccCCC---------------------------------HHHHHHHHHHHHHHcCCChHHHhcC---
Confidence 8899999988643221000 001112356688999994 444444
Q ss_pred cccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEE
Q 000576 320 EMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILI 399 (1412)
Q Consensus 320 ~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL 399 (1412)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+++|++++|
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 147 --PHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEK-QGISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred --chhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEeCCHHHHHHhcCEEEEE
Confidence 3479999999999999999999999999999999999999999999998653 3567777899999999999999999
Q ss_pred eCCeEEEecChhhHH
Q 000576 400 SDGQIVYQGPREHVL 414 (1412)
Q Consensus 400 ~~G~iv~~G~~~~~~ 414 (1412)
++|++++.|+++++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 414
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=322.59 Aligned_cols=211 Identities=19% Similarity=0.307 Sum_probs=166.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCC--CCCCceeEEEECCccCCCc-----CccceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 238 (1412)
+++|+|+|++|++||+++|+|||||||||||++|+|.++ |+...+|+|+++|+++... ..++.++|++|++.+
T Consensus 25 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 104 (259)
T PRK14274 25 HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNP 104 (259)
T ss_pred eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCcc
Confidence 459999999999999999999999999999999999986 3212379999999987421 123579999999877
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++. ||+||+.|+.+..+.... ++....++.+++.+|+.+......
T Consensus 105 ~~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l- 149 (259)
T PRK14274 105 FPQ-SIFDNVAYGPRIHGTKNK---------------------------------KKLQEIVEKSLKDVALWDEVKDRL- 149 (259)
T ss_pred ccc-CHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhhh-
Confidence 765 999999886432211000 001122455677778753211111
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
+..++.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. +.+++.++|+.+++.+++|++++
T Consensus 150 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~i~~ 226 (259)
T PRK14274 150 HTQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE---KYTIVIVTHNMQQAARVSDQTAF 226 (259)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEEcCHHHHHHhCCEEEE
Confidence 234557999999999999999999999999999999999999999999999743 45677789999999999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000576 399 ISDGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~ 414 (1412)
|++|+++.+|+++++.
T Consensus 227 l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 227 FYMGELVECNDTNKMF 242 (259)
T ss_pred EECCEEEEECCHHHHh
Confidence 9999999999998874
No 415
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.7e-32 Score=352.83 Aligned_cols=211 Identities=26% Similarity=0.393 Sum_probs=173.8
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++|+||+|+|+.. +++.+|+|+|++|+|||++||+||||||||||+++|+|...+ .+|+|.+||.|
T Consensus 477 ~~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 544 (711)
T TIGR00958 477 GLIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQP--TGGQVLLDGVP 544 (711)
T ss_pred CeEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEE
Confidence 369999999998521 124699999999999999999999999999999999997664 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh-------hcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR-------QALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~vg~~ 962 (1412)
+++ ..+++.++||+|++.++. .|++||+.++. .+.+ ++.++++++..++.+.. |+.+|..
T Consensus 545 i~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~-----~~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~ 614 (711)
T TIGR00958 545 LVQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL-----TDTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGEK 614 (711)
T ss_pred HHhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC-----CCCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccCC
Confidence 654 456788999999998875 69999997642 1222 23467778887776543 4555544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
..+||||||||++|||+|+++|+||+||||||+||++++..+++ .. ..+++|+|+++|+++ ..+.+|+|++|++
T Consensus 615 -G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~~ 688 (711)
T TIGR00958 615 -GSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLKK 688 (711)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999998 22 235899999999986 4678999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|+++..|+.
T Consensus 689 -G~ive~Gt~ 697 (711)
T TIGR00958 689 -GSVVEMGTH 697 (711)
T ss_pred -CEEEEeeCH
Confidence 899999985
No 416
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-33 Score=318.51 Aligned_cols=219 Identities=19% Similarity=0.248 Sum_probs=175.2
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 890 (1412)
.++++|++++++ .+.+|+|+|++|++|++++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 478999998874 235999999999999999999999999999999999975532 1369999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++.. ...++.++|++|++.+++. |++||+.+....+... ..+..++.++++++.+++.+....... ....
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGTT--AQSRLDEVVEKSLRQAALWDEVKDNLH-KSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCCC--hhhHHHHHHHHHHHHhCCchhhhhHhh-CCcc
Confidence 87532 1345679999999988875 9999998875433111 122233456777888887532111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 799999999999999999999999999999999999999999999985 5899999999987 57788999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 9999885
No 417
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.1e-34 Score=363.53 Aligned_cols=212 Identities=28% Similarity=0.449 Sum_probs=176.2
Q ss_pred CceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCc
Q 000576 812 PHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGY 891 (1412)
Q Consensus 812 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~ 891 (1412)
...++|+||+|.|+. ++.+|+|+|++++|||++||+||||||||||++.|.|...+ .+|+|.+||.
T Consensus 326 ~~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~ 391 (567)
T COG1132 326 IGSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGI 391 (567)
T ss_pred CCeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCE
Confidence 346999999999962 34699999999999999999999999999999999997664 4799999998
Q ss_pred cCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-------hhhhcccCC
Q 000576 892 PKKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN-------LLRQALVGL 961 (1412)
Q Consensus 892 ~~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-------~~~~~~vg~ 961 (1412)
++++ ..+++.++||+|+..++. -||+||+.++. ++.++++ ++++++..++. +-.|+.+|.
T Consensus 392 dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~ee----i~~a~k~a~~~d~I~~lp~g~dt~vge 461 (567)
T COG1132 392 DIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATDEE----IEEALKLANAHEFIANLPDGYDTIVGE 461 (567)
T ss_pred ehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCHHH----HHHHHHHhChHHHHHhCcccccceecC
Confidence 8654 467788999999988887 79999998753 2233322 34444443332 235778884
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEe
Q 000576 962 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLK 1041 (1412)
Q Consensus 962 ~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~ 1041 (1412)
. +.+||||||||++||||++++|+||+||||||+||+.++..|++.++++. +|+|+++++|+++. ...+|+|++|+
T Consensus 462 ~-G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRlst--i~~aD~IiVl~ 537 (567)
T COG1132 462 R-GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLST--IKNADRIIVLD 537 (567)
T ss_pred C-CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHhH--HHhCCEEEEEE
Confidence 4 45799999999999999999999999999999999999999999999877 57899999999963 45599999999
Q ss_pred cCcEEEEEcCC
Q 000576 1042 RGGQEIYVGPL 1052 (1412)
Q Consensus 1042 ~gG~~~y~G~~ 1052 (1412)
+ |+++..|+.
T Consensus 538 ~-G~i~e~G~h 547 (567)
T COG1132 538 N-GRIVERGTH 547 (567)
T ss_pred C-CEEEEecCH
Confidence 6 799999985
No 418
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=319.12 Aligned_cols=219 Identities=24% Similarity=0.269 Sum_probs=175.9
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 890 (1412)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 588999998874 246999999999999999999999999999999999964321 1379999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++.. ...++.++|++|++.+++. ||+||+.+....+.. ....+.++.++++++.+++.+....... ....
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 148 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLH-DSAL 148 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhh-cChh
Confidence 87642 2335678999999988874 999999987544321 1222334567788888887531111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 149 ~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14261 149 SLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GK 225 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999875 689999999986 57788999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14261 226 LIEFDKT 232 (253)
T ss_pred EEEcCCH
Confidence 9998885
No 419
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-33 Score=323.59 Aligned_cols=216 Identities=21% Similarity=0.278 Sum_probs=179.7
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++.. ....+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEE--FEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCCEEEECCEEC
Confidence 47899999987411 123589999999999999999999999999999999997654 479999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQ---ETFARISGYCEQNDI-HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
.. ...++.+||++|++. .++..||.||+.+..... ....++..+.++++++.+++.+..+.. ...|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 234567999999974 577789999998764322 123334445688999999998776654 347999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++. + ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 9999999999874 4 46999999985 79999
Q ss_pred EcCC
Q 000576 1049 VGPL 1052 (1412)
Q Consensus 1049 ~G~~ 1052 (1412)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8875
No 420
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=321.51 Aligned_cols=215 Identities=20% Similarity=0.258 Sum_probs=174.3
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--C-CeEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT--T-GYVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 890 (1412)
.++++|++++++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 589999999874 2359999999999999999999999999999999999532 1 13579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch----hhhcccCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL----LRQALVGL 961 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 961 (1412)
.++.. ...++.++|++|++.+++. |++||+.+...... .......++.+++.++.+++.. ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87642 1245679999999888875 99999987643221 1112223445677888888742 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEe
Q 000576 962 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLK 1041 (1412)
Q Consensus 962 ~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~ 1041 (1412)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 689999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000576 1042 RGGQEIYVGPL 1052 (1412)
Q Consensus 1042 ~gG~~~y~G~~ 1052 (1412)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 421
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-33 Score=312.35 Aligned_cols=202 Identities=27% Similarity=0.411 Sum_probs=166.3
Q ss_pred cccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC-------ccceEEE
Q 000576 159 LSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV-------PQRTAAY 231 (1412)
Q Consensus 159 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~y 231 (1412)
++++++++.+ |+|+++++ |+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|
T Consensus 6 l~~~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~ 79 (214)
T cd03297 6 IEKRLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGL 79 (214)
T ss_pred eeEecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEE
Confidence 3455566555 99999999 999999999999999999999999887 799999998764311 1357999
Q ss_pred EcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCc
Q 000576 232 ISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDV 311 (1412)
Q Consensus 232 v~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~ 311 (1412)
++|++.+++++|++||+.+...... . . .....++.+++.+||++
T Consensus 80 ~~q~~~~~~~~t~~~~l~~~~~~~~-----~------~-------------------------~~~~~~~~~l~~~~l~~ 123 (214)
T cd03297 80 VFQQYALFPHLNVRENLAFGLKRKR-----N------R-------------------------EDRISVDELLDLLGLDH 123 (214)
T ss_pred EecCCccCCCCCHHHHHHHHHhhCC-----H------H-------------------------HHHHHHHHHHHHcCCHh
Confidence 9999888889999999987642110 0 0 01123456788899976
Q ss_pred cccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 000576 312 CADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYD 391 (1412)
Q Consensus 312 ~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~ 391 (1412)
..+..+ ..||||||||++||++++.+|++++|||||+|||+.++..+.+.|++++.. .+++|++++|+.+++.+
T Consensus 124 ~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~ 197 (214)
T cd03297 124 LLNRYP-----AQLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKN-LNIPVIFVTHDLSEAEY 197 (214)
T ss_pred HhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEecCHHHHHH
Confidence 555444 479999999999999999999999999999999999999999999998653 35677778999999999
Q ss_pred hcCeEEEEeCCeEEEec
Q 000576 392 LFDDIILISDGQIVYQG 408 (1412)
Q Consensus 392 ~~D~vivL~~G~iv~~G 408 (1412)
++|++++|++|+++.+|
T Consensus 198 ~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 198 LADRIVVMEDGRLQYIG 214 (214)
T ss_pred hcCEEEEEECCEEEecC
Confidence 99999999999998765
No 422
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-33 Score=318.93 Aligned_cols=220 Identities=18% Similarity=0.230 Sum_probs=178.6
Q ss_pred CceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC--C-eEEEEEEE
Q 000576 812 PHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT--G-YVTGNITI 888 (1412)
Q Consensus 812 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i 888 (1412)
|..+.++++++++. ++.+|+|+|+.+++||+++|+|+||||||||+++|+|...+ + +.+|+|.+
T Consensus 6 ~~~~~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~ 72 (261)
T PRK14263 6 PIVMDCKLDKIFYG-------------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHF 72 (261)
T ss_pred CceEEEEeEEEEeC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEE
Confidence 34678888887763 34699999999999999999999999999999999997543 1 24799999
Q ss_pred cCccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCC
Q 000576 889 SGYPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPG 963 (1412)
Q Consensus 889 ~g~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~ 963 (1412)
+|.++.. ..+++.++|++|++.++ .+|+.||+.+....+.. ..+.++.++++++.+++.+..+...+ ..
T Consensus 73 ~g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~~----~~~~~~~~~~~l~~~~l~~~i~~~~~-~~ 146 (261)
T PRK14263 73 LGQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNRY----KGDLGDRVKHALQGAALWDEVKDKLK-VS 146 (261)
T ss_pred CCEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcCc----hHHHHHHHHHHHHHcCCchhhhhhhh-CC
Confidence 9987632 23456799999998876 59999999887644321 12234568889999998643222222 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEe--
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLK-- 1041 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~-- 1041 (1412)
.+.||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 147 ~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~ 224 (261)
T PRK14263 147 GLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVD 224 (261)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecc
Confidence 45799999999999999999999999999999999999999999999986 4799999999987 5778899999996
Q ss_pred -----cCcEEEEEcCC
Q 000576 1042 -----RGGQEIYVGPL 1052 (1412)
Q Consensus 1042 -----~gG~~~y~G~~ 1052 (1412)
++|+++..|+.
T Consensus 225 ~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 225 ISQGTRTGYLVEMGPT 240 (261)
T ss_pred cccccCCceEEEeCCH
Confidence 46899999985
No 423
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=352.06 Aligned_cols=219 Identities=26% Similarity=0.338 Sum_probs=183.4
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ ++.+|+|+|++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~ 68 (501)
T PRK10762 4 LLQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEV 68 (501)
T ss_pred eEEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEC
Confidence 478999998874 24699999999999999999999999999999999997654 479999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 894 KQE----TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLS-PEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 894 ~~~----~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
... ..++.++|++|++.+++.+||+|++.+....+.. ......+.++.++++++.+++.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 143 (501)
T PRK10762 69 TFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELS 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCC
Confidence 421 1235689999999899999999999876432211 11222334456889999999987766554 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+.|.|||+++|+++ ++.+.||++++|++ |+++.
T Consensus 144 gG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (501)
T PRK10762 144 IGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIA 221 (501)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 57788999999985 89999
Q ss_pred EcCCCC
Q 000576 1049 VGPLGR 1054 (1412)
Q Consensus 1049 ~G~~~~ 1054 (1412)
.|+..+
T Consensus 222 ~~~~~~ 227 (501)
T PRK10762 222 EREVAD 227 (501)
T ss_pred ecCcCc
Confidence 998754
No 424
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=321.62 Aligned_cols=219 Identities=24% Similarity=0.296 Sum_probs=178.2
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 890 (1412)
.+.++|++++++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 589999999884 246999999999999999999999999999999999975431 3589999999
Q ss_pred ccCCc----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCC
Q 000576 891 YPKKQ----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNG 966 (1412)
Q Consensus 891 ~~~~~----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~ 966 (1412)
.++.. ...++.++|++|++.+++ .|++||+.+..... .....++.+..+.++++.+++.+..+.... .....
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH--KLVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87642 234567899999988887 79999998764322 112333344456788899988653221111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEE
Q 000576 967 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQE 1046 (1412)
Q Consensus 967 lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~ 1046 (1412)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999986 57888999999985 899
Q ss_pred EEEcCC
Q 000576 1047 IYVGPL 1052 (1412)
Q Consensus 1047 ~y~G~~ 1052 (1412)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 999885
No 425
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.8e-33 Score=319.50 Aligned_cols=215 Identities=24% Similarity=0.270 Sum_probs=175.1
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc-
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP- 892 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~- 892 (1412)
.++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAP--DAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCccc
Confidence 488999998874 13599999999999999999999999999999999997654 47999999987
Q ss_pred ----CCcc---c----ccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch-hhhcc
Q 000576 893 ----KKQE---T----FARISGYCEQNDI--HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL-LRQAL 958 (1412)
Q Consensus 893 ----~~~~---~----~~~~~~yv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~ 958 (1412)
+... . .++.++|++|+.. +.+.+|+.|++.+...... .....+.+..++++++.+++.+ ..+..
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346899999974 5678899999876432111 1112233456788999999863 44433
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccE
Q 000576 959 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1037 (1412)
Q Consensus 959 vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v 1037 (1412)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|++. .+.+.+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998764 899999999986 466789999
Q ss_pred eEEecCcEEEEEcCC
Q 000576 1038 FLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1038 ~ll~~gG~~~y~G~~ 1052 (1412)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 899999875
No 426
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=9.3e-34 Score=323.54 Aligned_cols=210 Identities=20% Similarity=0.291 Sum_probs=173.7
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++. +...+|+|||+.|++||+++|+|+||||||||+++|+|... .+|+|.+||.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4789999998842 12358999999999999999999999999999999999764 369999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCC------CCC
Q 000576 894 KQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGL------PGV 964 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~------~~~ 964 (1412)
.. ...++.++|++|++.+++. |++||+.... ... ++.++++++.++|.+..+...+. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~~-tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFSG-TFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccchh-hHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 3456679999999988874 9999995321 111 23467788899998766654431 134
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
..||||||||++|||||+.+|+||+|||||+|||+.+...+++.|++.. .++|||+++|+++ .+ ..+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 5799999999999999999999999999999999999999999999875 4899999999985 34 45999999985 8
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
++++.|++
T Consensus 213 ~i~~~g~~ 220 (275)
T cd03289 213 KVRQYDSI 220 (275)
T ss_pred eEeecCCH
Confidence 99999987
No 427
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-33 Score=321.43 Aligned_cols=205 Identities=22% Similarity=0.311 Sum_probs=170.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC---ccceEEEEcCCCC-cCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV---PQRTAAYISQHDV-HIGE 241 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 241 (1412)
..+|+|+|++|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999987 799999998875432 2357999999863 6778
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000576 242 MTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 321 (1412)
Q Consensus 242 lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 321 (1412)
.||.||+.++.+..+.. + .+....++.+++.+||.+..++.+
T Consensus 97 ~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 138 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP-R---------------------------------EEMIKRVDEALLAVNMLDFKTREP---- 138 (277)
T ss_pred CCHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCHhHhhCCc----
Confidence 89999998864321110 0 011123567888899977666544
Q ss_pred cccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeC
Q 000576 322 IRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISD 401 (1412)
Q Consensus 322 ~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~ 401 (1412)
..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++. .+|+|++|++
T Consensus 139 -~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tiil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 139 -ARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEK-YQLTVLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHH-hCCEEEEEEC
Confidence 479999999999999999999999999999999999999999999998653 3567777899998886 6999999999
Q ss_pred CeEEEecChhhHH
Q 000576 402 GQIVYQGPREHVL 414 (1412)
Q Consensus 402 G~iv~~G~~~~~~ 414 (1412)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998875
No 428
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=322.47 Aligned_cols=218 Identities=21% Similarity=0.306 Sum_probs=174.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--CC-eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT--TG-YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 890 (1412)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 589999998874 2359999999999999999999999999999999999632 10 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch-hhhcccCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL-LRQALVGLPGV 964 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~ 964 (1412)
.++.. ...++.++|++|++.+++. ||.||+.+....+.. ......++.+.++++.+++.. +.+.. . ...
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~-~-~~~ 180 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRL-D-KNA 180 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHh-h-CCh
Confidence 87532 1245679999999888775 999999886543211 112223455778888888742 11111 1 123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |
T Consensus 181 ~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~~-G 257 (286)
T PRK14275 181 LGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFYE-G 257 (286)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999865 689999999987 57788999999985 8
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
+++..|+.
T Consensus 258 ~i~~~g~~ 265 (286)
T PRK14275 258 VLVEHAPT 265 (286)
T ss_pred EEEEeCCH
Confidence 99999885
No 429
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=322.88 Aligned_cols=214 Identities=25% Similarity=0.305 Sum_probs=170.1
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCC--CCceeEEEECCccCCCcC----ccceEEEEcCCC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRLYGRVTYNGHNMDEFV----PQRTAAYISQHD 236 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d 236 (1412)
++++++|+|+|++|++||+++|+||||||||||+++|+|+++|. ...+|+|.++|+++.+.. .++.++|++|++
T Consensus 31 ~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~ 110 (276)
T PRK14271 31 FAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRP 110 (276)
T ss_pred ECCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCC
Confidence 33456999999999999999999999999999999999998751 013799999998875431 246799999987
Q ss_pred CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccc
Q 000576 237 VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 316 (1412)
Q Consensus 237 ~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 316 (1412)
.+++ +||+||+.++........ . .+....++.+++.+||.+..++.
T Consensus 111 ~l~~-~tv~eni~~~~~~~~~~~----------------------~-----------~~~~~~~~~~l~~~~l~~~~~~~ 156 (276)
T PRK14271 111 NPFP-MSIMDNVLAGVRAHKLVP----------------------R-----------KEFRGVAQARLTEVGLWDAVKDR 156 (276)
T ss_pred ccCC-ccHHHHHHHHHHhccCCC----------------------H-----------HHHHHHHHHHHHHcCCCchhhhH
Confidence 7776 899999988643211000 0 00112234567888886543222
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
. ++.+..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ..+|++++|+.+++.+++|++
T Consensus 157 l-~~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~---~~tiiivsH~~~~~~~~~dri 232 (276)
T PRK14271 157 L-SDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD---RLTVIIVTHNLAQAARISDRA 232 (276)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCEE
Confidence 2 234557999999999999999999999999999999999999999999998753 357777899999999999999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000576 397 ILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~ 414 (1412)
++|++|++++.|+++++.
T Consensus 233 ~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 233 ALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999998874
No 430
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.7e-33 Score=311.93 Aligned_cols=199 Identities=22% Similarity=0.327 Sum_probs=165.9
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC-ccceEEEEcCCCCcCCCCCHHH
Q 000576 168 ILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV-PQRTAAYISQHDVHIGEMTVRE 246 (1412)
Q Consensus 168 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~e 246 (1412)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 467999999999999999999999999999999999987 799999999875432 2467999999988888899999
Q ss_pred HHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccccCC
Q 000576 247 TLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIRGIS 326 (1412)
Q Consensus 247 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~~LS 326 (1412)
|+.+...... ... .+....++.+++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~~-~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KLN---------------------------------AEQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhccC-Ccc---------------------------------HHHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 9987532100 000 001123456888999987666554 4799
Q ss_pred hhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCeEEE
Q 000576 327 GGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQIVY 406 (1412)
Q Consensus 327 GGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~iv~ 406 (1412)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.+. .+++|++++|+.+++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSE-RQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 99999999999999999999999999999999999999999998653 35677778999999999999999999999998
Q ss_pred ecC
Q 000576 407 QGP 409 (1412)
Q Consensus 407 ~G~ 409 (1412)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 874
No 431
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.1e-33 Score=360.64 Aligned_cols=210 Identities=23% Similarity=0.366 Sum_probs=178.4
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++|++|+|+. ++.+|+|+|++++|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 46999999999851 13599999999999999999999999999999999997765 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh-------hcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR-------QALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~vg~~ 962 (1412)
+++ ..+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+++.+.. |+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 653 4567889999999999886 9999998752 122 23478888888877544 4445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
..+||||||||++|||||+++|+||+||||||+||+.++..|++.|+++.+ ++|||+++|+++ ....||++++|++
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~ 549 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR 549 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999864 699999999985 5677999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|+++..|+.
T Consensus 550 -G~i~~~G~~ 558 (592)
T PRK10790 550 -GQAVEQGTH 558 (592)
T ss_pred -CEEEEEcCH
Confidence 899999985
No 432
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.2e-33 Score=320.49 Aligned_cols=208 Identities=23% Similarity=0.326 Sum_probs=168.8
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCcc-----CCCcCc-------cceEEEE
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHN-----MDEFVP-------QRTAAYI 232 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv 232 (1412)
++.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|+
T Consensus 18 ~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v 94 (258)
T PRK11701 18 PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFV 94 (258)
T ss_pred CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEE
Confidence 346999999999999999999999999999999999999887 7999999987 544322 2369999
Q ss_pred cCCC--CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC
Q 000576 233 SQHD--VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD 310 (1412)
Q Consensus 233 ~Q~d--~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~ 310 (1412)
+|++ .+.+.+|++||+.+.....+.. +. .+....++++++.+|+.
T Consensus 95 ~q~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------~~-----------~~~~~~~~~~l~~~~l~ 141 (258)
T PRK11701 95 HQHPRDGLRMQVSAGGNIGERLMAVGAR----------------------HY-----------GDIRATAGDWLERVEID 141 (258)
T ss_pred eeCcccccCccccHHHHHHHHHHHhccC----------------------cH-----------HHHHHHHHHHHHHcCCC
Confidence 9986 3567789999997643211000 00 00112346678899996
Q ss_pred c-cccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 000576 311 V-CADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEA 389 (1412)
Q Consensus 311 ~-~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~ 389 (1412)
+ ..++. +..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.+. .+.+|+.++|+..++
T Consensus 142 ~~~~~~~-----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~isH~~~~~ 215 (258)
T PRK11701 142 AARIDDL-----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRE-LGLAVVIVTHDLAVA 215 (258)
T ss_pred hhHHhCC-----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHH
Confidence 3 44443 4479999999999999999999999999999999999999999999987653 366777799999999
Q ss_pred HhhcCeEEEEeCCeEEEecChhhHH
Q 000576 390 YDLFDDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 390 ~~~~D~vivL~~G~iv~~G~~~~~~ 414 (1412)
.+++|++++|++|++++.|+++++.
T Consensus 216 ~~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 216 RLLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999988764
No 433
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.4e-33 Score=310.84 Aligned_cols=201 Identities=23% Similarity=0.300 Sum_probs=171.6
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ ++.+|+++|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 589999998773 23599999999999999999999999999999999997654 479999999876
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHH
Q 000576 894 KQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRK 973 (1412)
Q Consensus 894 ~~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrq 973 (1412)
.....++.++|++|++.+++.+|++|++.+....+. .. ..+.++++++.+++.+..+..+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543344568999999988888999999987654321 11 2234678899999877666543 479999999
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEe
Q 000576 974 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLK 1041 (1412)
Q Consensus 974 Rl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~ 1041 (1412)
|++|||+++.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|+++ ++.+.+|+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999998888999999999987 6888999999986
No 434
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-33 Score=311.23 Aligned_cols=224 Identities=22% Similarity=0.313 Sum_probs=182.5
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC-C-C-eEEEEEEEcCc
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT-T-G-YVTGNITISGY 891 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~-~-~-~~~G~i~i~g~ 891 (1412)
++++||+.++... .+...+++||||++++||++||+|.|||||||+.++|.|... + + ..+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~---------~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTD---------AGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecC---------CccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 5789998877532 124579999999999999999999999999999999999665 2 3 46789999998
Q ss_pred cCC---ccc----ccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCC
Q 000576 892 PKK---QET----FARISGYCEQNDI--HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLP 962 (1412)
Q Consensus 892 ~~~---~~~----~~~~~~yv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~ 962 (1412)
++- ++. +.+.+++++|++. +.|.+||.+-+.=......... ..++..+++.++++.+++.+-...+...
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~Y- 150 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKSY- 150 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhhC-
Confidence 643 221 2357999999964 7899999887764443322111 3445567788999999998754333333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEe
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLK 1041 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~ 1041 (1412)
...|||||||||.||.||+.+|++|+.||||++||...+++|++.|+++.+ .|.|+|++|||.. -+.+++|||.||.
T Consensus 151 -PhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY 228 (316)
T COG0444 151 -PHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY 228 (316)
T ss_pred -CcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE
Confidence 357999999999999999999999999999999999999999999999986 6999999999987 4889999999999
Q ss_pred cCcEEEEEcCC
Q 000576 1042 RGGQEIYVGPL 1052 (1412)
Q Consensus 1042 ~gG~~~y~G~~ 1052 (1412)
.|++|..|+.
T Consensus 229 -aG~iVE~g~~ 238 (316)
T COG0444 229 -AGRIVEEGPV 238 (316)
T ss_pred -CcEEEEeCCH
Confidence 4899999997
No 435
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=319.47 Aligned_cols=212 Identities=22% Similarity=0.351 Sum_probs=167.8
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCC--CCCceeEEEECCccCCCc-----CccceEEEEcCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDS--SLRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDV 237 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 237 (1412)
++++|+|+|+++++||+++|+|||||||||||++|+|.+++ ....+|+|.++|.++... ..++.++|++|++.
T Consensus 15 ~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~ 94 (250)
T PRK14262 15 EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPT 94 (250)
T ss_pred CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCc
Confidence 35699999999999999999999999999999999999874 111379999999887532 12357999999887
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
+++ +||+||+.++....+.... ......+++.++.+|+....+..
T Consensus 95 ~~~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~- 139 (250)
T PRK14262 95 PFP-MSIYDNVAFGPRIHGVKSK---------------------------------HKLDRIVEESLKKAALWDEVKSE- 139 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCchhHHH-
Confidence 776 8999999986532211000 00112235567777775422111
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
.++.+..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +++++.++|+.+++.+++|+++
T Consensus 140 ~~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tili~sH~~~~~~~~~d~i~ 216 (250)
T PRK14262 140 LNKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE---NYTIVIVTHNIGQAIRIADYIA 216 (250)
T ss_pred HhCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc---CcEEEEEeCCHHHHHHhCCEEE
Confidence 2344568999999999999999999999999999999999999999999999753 3677778999999999999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000576 398 LISDGQIVYQGPREHVL 414 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~ 414 (1412)
+|++|+++..|+.+++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 217 FMYRGELIEYGPTREIV 233 (250)
T ss_pred EEECCEEEEecCHHHHH
Confidence 99999999999988774
No 436
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2.8e-33 Score=311.95 Aligned_cols=211 Identities=22% Similarity=0.329 Sum_probs=175.1
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.+... .+.+.+|+|+||++++|+++||+|+||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSV--QEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEhH
Confidence 6789999877410 1125799999999999999999999999999999999997653 4799999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCC
Q 000576 895 QE------TFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLS 968 (1412)
Q Consensus 895 ~~------~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lS 968 (1412)
.. ..++.++|++|++.+++.+|+.||+.+...... .....+..+.++++++.+++.+..+..+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCC
Confidence 21 245679999999998899999999988654321 1233444556889999999987666543 4799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecCcEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRGGQE 1046 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~ 1046 (1412)
+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+.+|++++|.+ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999876 4899999999985 4588999999985 564
No 437
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=319.45 Aligned_cols=211 Identities=22% Similarity=0.350 Sum_probs=165.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCC--CCCceeEEEECCccCCCc-----CccceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDS--SLRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 238 (1412)
+++|+|+|++|++||+++|+||||||||||+++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.+
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14240 16 FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNP 95 (250)
T ss_pred ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCcc
Confidence 4599999999999999999999999999999999998753 212379999999987531 124579999998777
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++ +||+||+.++....+.... ......++.+++.+++.+......
T Consensus 96 ~~-~t~~~ni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~- 140 (250)
T PRK14240 96 FP-MSIYDNVAYGPRTHGIKDK---------------------------------KKLDEIVEKSLKGAALWDEVKDRL- 140 (250)
T ss_pred Cc-ccHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhHHHH-
Confidence 76 8999999986543221000 001122344566666642211111
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
++.+..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +++|+.++|+.+++.+++|++++
T Consensus 141 ~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~v~~ 217 (250)
T PRK14240 141 KKSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK---DYTIVIVTHNMQQASRISDKTAF 217 (250)
T ss_pred hcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEEeCHHHHHhhCCEEEE
Confidence 234457999999999999999999999999999999999999999999999742 45677789999999999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000576 399 ISDGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~ 414 (1412)
|++|+++..|+.+++.
T Consensus 218 l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 218 FLNGEIVEFGDTVDLF 233 (250)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 438
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.9e-33 Score=315.26 Aligned_cols=201 Identities=24% Similarity=0.309 Sum_probs=166.0
Q ss_pred eecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC--eEEEEEEEcCccCCcccc-cceEEEeccCCC--CCCCCC
Q 000576 842 LLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG--YVTGNITISGYPKKQETF-ARISGYCEQNDI--HSPQVT 916 (1412)
Q Consensus 842 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~~yv~Q~~~--~~~~lT 916 (1412)
+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999976531 147999999988654322 357899999974 567789
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch---hhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCC
Q 000576 917 VYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL---LRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 993 (1412)
Q Consensus 917 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~---~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEP 993 (1412)
+.|++.+....... .....++.++++++.+++.+ ..+.. +..||||||||++|||+|+.+|++|+||||
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLGK---LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcCc---cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 99999775433211 12333456889999999973 33333 347999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCC
Q 000576 994 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 994 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~ 1052 (1412)
|+|||+.+...+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999987 57788999999985 899998875
No 439
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=9.1e-34 Score=358.70 Aligned_cols=212 Identities=28% Similarity=0.417 Sum_probs=178.4
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++||+++|+. +++.+|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p--~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDP--QQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 46999999999852 123589999999999999999999999999999999997654 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh------hcccCCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR------QALVGLPG 963 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~------~~~vg~~~ 963 (1412)
+++ ..+++.++||+|++.+++ -|++||+.++. ++.+ ++.++++++.+++.+.. |+.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~-----~~~~----~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA-----PNAS----DEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC-----CccC----HHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 654 456778999999988776 59999997642 1222 33478888888887653 4555544
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
...||||||||++|||+|+++|++|+||||||+||+.++..+++.|+++. +++|+|+++|+++. ...+|++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~~--~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLTG--LEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChhH--HHhCCEEEEEeC-
Confidence 45799999999999999999999999999999999999999999999986 48999999999873 467999999985
Q ss_pred cEEEEEcCC
Q 000576 1044 GQEIYVGPL 1052 (1412)
Q Consensus 1044 G~~~y~G~~ 1052 (1412)
|+++..|+.
T Consensus 549 G~i~~~g~~ 557 (574)
T PRK11160 549 GQIIEQGTH 557 (574)
T ss_pred CeEEEeCCH
Confidence 899999874
No 440
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=319.62 Aligned_cols=214 Identities=18% Similarity=0.285 Sum_probs=168.7
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCC--CCCCceeEEEECCccCCCcC-----ccceEEEEcCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRLYGRVTYNGHNMDEFV-----PQRTAAYISQHD 236 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d 236 (1412)
+++++|+|+|++|++|++++|+||||||||||+++|+|..+ |+...+|+|+++|.++.... .++.++|++|++
T Consensus 16 ~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 95 (251)
T PRK14244 16 GSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKP 95 (251)
T ss_pred CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCc
Confidence 34569999999999999999999999999999999999976 21113799999998764321 245799999987
Q ss_pred CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccc
Q 000576 237 VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 316 (1412)
Q Consensus 237 ~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 316 (1412)
.+++. ||+||+.++....+..... .+....++.+++.+||.+...+.
T Consensus 96 ~~~~~-tv~~ni~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 142 (251)
T PRK14244 96 NPFPK-SIYDNVAYGPKLHGLAKNK--------------------------------KKLDEIVEKSLTSVGLWEELGDR 142 (251)
T ss_pred ccccC-CHHHHHHHHHHhcCCCCCH--------------------------------HHHHHHHHHHHHHcCCCchhhhH
Confidence 77775 9999998864322110000 00112345678888986532222
Q ss_pred ccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000576 317 VGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDI 396 (1412)
Q Consensus 317 vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~v 396 (1412)
+ +..++.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.+ +.+|+.++|+..++.+++|++
T Consensus 143 ~-~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tiiiisH~~~~~~~~~d~i 218 (251)
T PRK14244 143 L-KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKK---NFTIIVVTHSMKQAKKVSDRV 218 (251)
T ss_pred h-hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHhhcCEE
Confidence 2 234557999999999999999999999999999999999999999999998742 567777899999999999999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000576 397 ILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 397 ivL~~G~iv~~G~~~~~~ 414 (1412)
++|++|++++.|+++++.
T Consensus 219 ~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 219 AFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 441
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=352.22 Aligned_cols=218 Identities=26% Similarity=0.325 Sum_probs=181.9
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ ++.+|+|+||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEP--TKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCC--CccEEEECCEEC
Confidence 488999998874 24699999999999999999999999999999999997654 479999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhc----CCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 894 KQE----TFARISGYCEQNDIHSPQVTVYESLLYSAWLR----LSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 894 ~~~----~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr----~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
... ..++.++|++|++.+++.+||+|++.+..... ........+.++.++++++.+++.+..+..+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 431 12346899999998999999999998653210 0000122334456889999999987666554 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ .+.+.||++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999878999999999986 57788999999985 89
Q ss_pred EEEEcCCC
Q 000576 1046 EIYVGPLG 1053 (1412)
Q Consensus 1046 ~~y~G~~~ 1053 (1412)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (510)
T PRK09700 223 SVCSGMVS 230 (510)
T ss_pred Eeeecchh
Confidence 99999874
No 442
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-33 Score=317.14 Aligned_cols=219 Identities=24% Similarity=0.316 Sum_probs=174.7
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--CC-eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT--TG-YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 890 (1412)
.++++|++++++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 478999999874 2359999999999999999999999999999999999754 11 2579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.+... ...++.++|++|++.+++ .||+||+.+....+.. ...+..++.++++++.+++......... ....
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 146 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGV--KDKELIDQRVEESLKQAAIWKETKDNLD-RNAQ 146 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCcchHHHhc-cChh
Confidence 87532 124567999999988776 7999999876433211 1122234557888898888421111111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 147 ~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14251 147 AFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLMN-GD 223 (251)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999864 799999999987 57788999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
++..|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14251 224 LIEAGPT 230 (251)
T ss_pred EEEeCCH
Confidence 9998875
No 443
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=322.80 Aligned_cols=210 Identities=22% Similarity=0.319 Sum_probs=164.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCC--CceeEEEECCccCCCc-----CccceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL--RLYGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 238 (1412)
+.+|+|+|++|++|++++|+|||||||||||++|+|.+++.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 26 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 105 (269)
T PRK14259 26 FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNP 105 (269)
T ss_pred EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCcc
Confidence 459999999999999999999999999999999999986310 1379999999876421 123569999999877
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++ .||+||+.+++...+.. + + ....++.+++.+++....+...
T Consensus 106 ~~-~tv~enl~~~~~~~~~~---~---~-----------------------------~~~~~~~~l~~~~l~~~l~~~~- 148 (269)
T PRK14259 106 FP-KSIYENIAFGARINGYT---G---D-----------------------------MDELVERSLRKAAVWDECKDKL- 148 (269)
T ss_pred ch-hhHHHHHhhhhhhcCCc---H---H-----------------------------HHHHHHHHHHHhCCcchhhhhh-
Confidence 77 59999999875432210 0 0 0012334566666542111111
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
++.+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++ +.+|+.++|+..++.+++|++++
T Consensus 149 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~i~~ 225 (269)
T PRK14259 149 NESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK---NFTIVIVTHNMQQAVRVSDMTAF 225 (269)
T ss_pred CCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEEEE
Confidence 234557999999999999999999999999999999999999999999998743 46677789999999999999999
Q ss_pred EeC-----------CeEEEecChhhHHH
Q 000576 399 ISD-----------GQIVYQGPREHVLE 415 (1412)
Q Consensus 399 L~~-----------G~iv~~G~~~~~~~ 415 (1412)
|++ |++++.|+++++.+
T Consensus 226 l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 226 FNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred EeccccccccccccceEEEeCCHHHHHh
Confidence 996 67899999988753
No 444
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-33 Score=317.33 Aligned_cols=212 Identities=21% Similarity=0.274 Sum_probs=167.1
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCC--CceeEEEECCccCCCc-----CccceEEEEcCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL--RLYGRVTYNGHNMDEF-----VPQRTAAYISQHDV 237 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 237 (1412)
++.+|+|+|++|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.
T Consensus 16 ~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 95 (251)
T PRK14249 16 KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPN 95 (251)
T ss_pred CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCc
Confidence 3469999999999999999999999999999999999998741 1259999999887432 12467999999987
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
+++. ||+||+.++....+.... + +.....+.+++.+||.+......
T Consensus 96 ~~~~-tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~~ 141 (251)
T PRK14249 96 PFPK-SIFDNVAFGPRMLGTTAQ-S--------------------------------RLDEVVEKSLRQAALWDEVKDNL 141 (251)
T ss_pred cCcC-cHHHHHhhHHHhcCCChh-h--------------------------------HHHHHHHHHHHHhCCchhhhhHh
Confidence 7764 999999987543221000 0 00112344556666643211111
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
++.+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. .+.+|+.++|+..++.+++|+++
T Consensus 142 -~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~~tilivsh~~~~~~~~~d~i~ 217 (251)
T PRK14249 142 -HKSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK---QNYTIAIVTHNMQQAARASDWTG 217 (251)
T ss_pred -hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh---cCCEEEEEeCCHHHHHhhCCEEE
Confidence 34455799999999999999999999999999999999999999999999873 25677779999999999999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000576 398 LISDGQIVYQGPREHVL 414 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~ 414 (1412)
+|++|++++.|+.+++.
T Consensus 218 ~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 218 FLLTGDLVEYGRTGEIF 234 (251)
T ss_pred EEeCCeEEEeCCHHHHH
Confidence 99999999999988874
No 445
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-33 Score=315.98 Aligned_cols=219 Identities=23% Similarity=0.303 Sum_probs=173.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--CC-eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT--TG-YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 890 (1412)
.++++|+++.++ .+.+|+|+|+++++||++||+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 478999998874 2469999999999999999999999999999999999643 21 1379999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++.. ...++.++|++|++.+++ .|++||+.+....+... .....++.+.+.++.+++......... ....
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~ 147 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGVK--DKAVLDEAVETSLKQAAIWDEVKDHLH-ESAL 147 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHHcCCccchhhHHh-cCcc
Confidence 87632 234567999999988887 69999998765433211 122223456677787776421111111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ .+.+.+|++++|++ |+
T Consensus 148 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14255 148 SLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFLT-GN 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 589999999987 57788999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14255 225 LIEFADT 231 (252)
T ss_pred EEEeCCH
Confidence 9999875
No 446
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.6e-33 Score=351.94 Aligned_cols=209 Identities=25% Similarity=0.405 Sum_probs=165.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 242 (1412)
+++|+|+|++++||+.++|+||||||||||+++|+|+++|+ +|+|.+||+++.+... ++.++||+|++.+++ .
T Consensus 331 ~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~-~ 406 (544)
T TIGR01842 331 KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPT---SGSVRLDGADLKQWDRETFGKHIGYLPQDVELFP-G 406 (544)
T ss_pred ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEehhhCCHHHHhhheEEecCCccccc-c
Confidence 45899999999999999999999999999999999999987 7999999998876543 468999999876665 5
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|++||+.++... . +.+...++.... ..+..++ .+++..||.+|+++
T Consensus 407 ti~~Ni~~~~~~----~---------------------~~~~~~~~~~~~------~~~~~i~--~l~~gl~t~~~~~g- 452 (544)
T TIGR01842 407 TVAENIARFGEN----A---------------------DPEKIIEAAKLA------GVHELIL--RLPDGYDTVIGPGG- 452 (544)
T ss_pred cHHHHHhccCCC----C---------------------CHHHHHHHHHHh------ChHHHHH--hCccccccccCCCc-
Confidence 999999854210 0 001111111000 0122333 35667789998765
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
..||||||||++||||++++|++++|||||||||+.++..+.+.|+++.. ++.+++.++|+.+ ..+.+|+|++|++|
T Consensus 453 ~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~--~~~tvi~ith~~~-~~~~~d~i~~l~~G 529 (544)
T TIGR01842 453 ATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA--RGITVVVITHRPS-LLGCVDKILVLQDG 529 (544)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhh--CCCEEEEEeCCHH-HHHhCCEEEEEECC
Confidence 47999999999999999999999999999999999999999999998742 3456666777775 45789999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
++++.|+++++.+
T Consensus 530 ~i~~~g~~~~l~~ 542 (544)
T TIGR01842 530 RIARFGERDEVLA 542 (544)
T ss_pred EEEeeCCHHHHhh
Confidence 9999999988753
No 447
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.8e-33 Score=356.34 Aligned_cols=207 Identities=21% Similarity=0.351 Sum_probs=165.8
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCCC
Q 000576 167 TILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMT 243 (1412)
Q Consensus 167 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 243 (1412)
++|+|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.++ +.|
T Consensus 349 ~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf-~~T 424 (588)
T PRK13657 349 QGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQ---SGRILIDGTDIRTVTRASLRRNIAVVFQDAGLF-NRS 424 (588)
T ss_pred ceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCEEhhhCCHHHHHhheEEEecCcccc-ccc
Confidence 4899999999999999999999999999999999999997 8999999999877653 46899999976544 679
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccc
Q 000576 244 VRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIR 323 (1412)
Q Consensus 244 V~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 323 (1412)
++|||.++... .+.+...++....+ .+..++ .+++..||.+|+.+.
T Consensus 425 i~~Ni~~~~~~-------------------------~~d~~i~~al~~~~------l~~~i~--~lp~gldt~i~~~g~- 470 (588)
T PRK13657 425 IEDNIRVGRPD-------------------------ATDEEMRAAAERAQ------AHDFIE--RKPDGYDTVVGERGR- 470 (588)
T ss_pred HHHHHhcCCCC-------------------------CCHHHHHHHHHHhC------HHHHHH--hCcccccchhcCCCC-
Confidence 99999986310 11111111110000 111111 267788999998644
Q ss_pred cCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCe
Q 000576 324 GISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQ 403 (1412)
Q Consensus 324 ~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~ 403 (1412)
.||||||||++|||||+++|++++||||||+||+.++..|.+.|++.. +++|+++++|+.. ..+.+|+|++|++|+
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~---~~~tvIiitHr~~-~~~~~D~ii~l~~G~ 546 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELM---KGRTTFIIAHRLS-TVRNADRILVFDNGR 546 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh---cCCEEEEEEecHH-HHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999998763 2456666777764 567899999999999
Q ss_pred EEEecChhhHHH
Q 000576 404 IVYQGPREHVLE 415 (1412)
Q Consensus 404 iv~~G~~~~~~~ 415 (1412)
++..|+++++.+
T Consensus 547 i~~~g~~~~l~~ 558 (588)
T PRK13657 547 VVESGSFDELVA 558 (588)
T ss_pred EEEeCCHHHHHH
Confidence 999999998864
No 448
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=8.8e-33 Score=358.15 Aligned_cols=212 Identities=26% Similarity=0.435 Sum_probs=177.6
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++||+|+|+. +.+.+|+|+|++|+|||++||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQP--TEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 36999999999852 234599999999999999999999999999999999997664 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh-------hcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR-------QALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~vg~~ 962 (1412)
+++ ..+++.++||+|++.+++ .|++||+.+.. ++.++ +.++++++..++.+.. |+.+|..
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~-----~~~~~----~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA-----PYADD----EEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC-----CCCCH----HHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 654 456788999999998876 59999997641 12232 3356777777765533 4556654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
+.+||||||||++|||||+++|+||+||||||+||+.++..|++.|+++. +++|+|+++|+++ ..+.+|++++|++
T Consensus 599 -G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~ 674 (694)
T TIGR03375 599 -GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN 674 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 35799999999999999999999999999999999999999999999886 4799999999986 4678999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|+++..|+.
T Consensus 675 -G~i~e~G~~ 683 (694)
T TIGR03375 675 -GRIVADGPK 683 (694)
T ss_pred -CEEEeeCCH
Confidence 899999974
No 449
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=3.9e-33 Score=317.49 Aligned_cols=209 Identities=24% Similarity=0.296 Sum_probs=167.1
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCC-CceeEEEECCccCCCcCc-cceEEEEcCCCC--cCCCC
Q 000576 167 TILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL-RLYGRVTYNGHNMDEFVP-QRTAAYISQHDV--HIGEM 242 (1412)
Q Consensus 167 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~l 242 (1412)
++|+|+|+++++||+++|+||||||||||+++|+|.++|.. ..+|+|.++|+++..... ++.++||+|++. +.+..
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 58999999999999999999999999999999999998711 027999999998754322 256999999864 34567
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|+.+++.+.++..+.. .....++.+++.+||.+.. +.. +..+
T Consensus 97 ~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~l~~~~l~~~~-~~~-~~~~ 138 (254)
T PRK10418 97 TMHTHARETCLALGKP------------------------------------ADDATLTAALEAVGLENAA-RVL-KLYP 138 (254)
T ss_pred cHHHHHHHHHHHcCCC------------------------------------hHHHHHHHHHHHcCCCChh-hhh-hcCC
Confidence 9999987643221100 0012345678889987521 111 2334
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+++|++++|++|
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~~l~~G 217 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVAVMSHG 217 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEEEEECC
Confidence 579999999999999999999999999999999999999999999998653 3567777899999999999999999999
Q ss_pred eEEEecChhhHH
Q 000576 403 QIVYQGPREHVL 414 (1412)
Q Consensus 403 ~iv~~G~~~~~~ 414 (1412)
++++.|+.+++.
T Consensus 218 ~i~~~~~~~~~~ 229 (254)
T PRK10418 218 RIVEQGDVETLF 229 (254)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 450
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.9e-33 Score=363.99 Aligned_cols=208 Identities=27% Similarity=0.441 Sum_probs=167.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 242 (1412)
+++|+|+|++|+||+.++|+|+||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++. +++.
T Consensus 470 ~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~---~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~-lf~~ 545 (694)
T TIGR01846 470 PEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQ---HGQVLVDGVDLAIADPAWLRRQMGVVLQENV-LFSR 545 (694)
T ss_pred ccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEehhhCCHHHHHHhCeEEccCCe-ehhh
Confidence 35899999999999999999999999999999999999997 7999999999887654 467999999755 5567
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|++|||.++.. +.+.+...+++...+ .+..++ .|+...||.+|+.+
T Consensus 546 ti~eNi~~~~~-------------------------~~~~~~i~~a~~~~~------l~~~i~--~lp~gl~t~i~~~g- 591 (694)
T TIGR01846 546 SIRDNIALCNP-------------------------GAPFEHVIHAAKLAG------AHDFIS--ELPQGYNTEVGEKG- 591 (694)
T ss_pred hHHHHHhcCCC-------------------------CCCHHHHHHHHHHcC------hHHHHH--hCcCccCcEecCCC-
Confidence 99999987521 111111111111100 111122 36778899999865
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
.+||||||||++|||||+.+|++|+||||||+||+.++..+.+.|+++. .+.|++.++|..+.+ +.+|+|++|++|
T Consensus 592 ~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~---~~~t~i~itH~~~~~-~~~d~ii~l~~G 667 (694)
T TIGR01846 592 ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC---RGRTVIIIAHRLSTV-RACDRIIVLEKG 667 (694)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh---CCCEEEEEeCChHHH-HhCCEEEEEeCC
Confidence 4799999999999999999999999999999999999999999999863 345666677877655 569999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
+++++|+++++.+
T Consensus 668 ~i~~~g~~~~l~~ 680 (694)
T TIGR01846 668 QIAESGRHEELLA 680 (694)
T ss_pred EEEEeCCHHHHHH
Confidence 9999999999864
No 451
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-33 Score=319.77 Aligned_cols=220 Identities=19% Similarity=0.229 Sum_probs=175.1
Q ss_pred CceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCC---eEEEEEEE
Q 000576 812 PHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTG---YVTGNITI 888 (1412)
Q Consensus 812 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i 888 (1412)
+..++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.+
T Consensus 18 ~~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 84 (274)
T PRK14265 18 HSVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLY 84 (274)
T ss_pred CceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEE
Confidence 34689999999874 236999999999999999999999999999999999964321 24799999
Q ss_pred cCccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCC
Q 000576 889 SGYPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPG 963 (1412)
Q Consensus 889 ~g~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~ 963 (1412)
+|.++.. ..+++.++|++|+..+++. ||.||+.+....+. .. ...++.+++.++.+++.......... .
T Consensus 85 ~g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~-~ 158 (274)
T PRK14265 85 RDRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKE-K 158 (274)
T ss_pred CCEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcC-C
Confidence 9987532 2345679999999887765 99999987643321 11 12234466778888774211111111 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEe--
Q 000576 964 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLK-- 1041 (1412)
Q Consensus 964 ~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~-- 1041 (1412)
...||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 159 ~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~~ 236 (274)
T PRK14265 159 GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFNTE 236 (274)
T ss_pred cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEecc
Confidence 357999999999999999999999999999999999999999999999865 799999999987 5788999999997
Q ss_pred ------cCcEEEEEcCC
Q 000576 1042 ------RGGQEIYVGPL 1052 (1412)
Q Consensus 1042 ------~gG~~~y~G~~ 1052 (1412)
+.|++++.|++
T Consensus 237 ~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 237 IDEYGKRRGKLVEFSPT 253 (274)
T ss_pred cccccccCceEEEeCCH
Confidence 25899999996
No 452
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=321.65 Aligned_cols=218 Identities=24% Similarity=0.399 Sum_probs=174.4
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ +++.+|+|+|++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRL--ASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEh
Confidence 588999998873 124599999999999999999999999999999999997654 479999999876
Q ss_pred CcccccceEEEeccCCCCC--CCCCHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHH
Q 000576 894 KQETFARISGYCEQNDIHS--PQVTVYESLLYSAWLRL-SPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTE 970 (1412)
Q Consensus 894 ~~~~~~~~~~yv~Q~~~~~--~~lTv~E~l~f~a~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgG 970 (1412)
.....++.++|++|++.+. ...+++|++.+...... .........++.++++++.+++.+..+..+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234689999987542 23578888765321000 001111223445788899999987766554 469999
Q ss_pred HHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 971 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 971 qrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 577889999776 4 8999999
Q ss_pred CCC
Q 000576 1051 PLG 1053 (1412)
Q Consensus 1051 ~~~ 1053 (1412)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 864
No 453
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.8e-33 Score=308.06 Aligned_cols=199 Identities=22% Similarity=0.304 Sum_probs=165.2
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARP--DAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 57889988774 24699999999999999999999999999999999997654 4799999998754
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 895 Q--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 895 ~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
. ..+++.++|++|++.+++.+|+.|++.+....+.. ..++.++++++.+++.+..+..+ ..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~~------~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHGP------GDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcCc------cHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHH
Confidence 2 23456789999999889999999999876543211 12345788999999987666543 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEE
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLL 1040 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll 1040 (1412)
||++||++|+++|++++|||||+|||+.+...+++.|+++.++|+|||+++|+++ .+-+.-+|++.+
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999998777899999999986 344433455554
No 454
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=317.80 Aligned_cols=210 Identities=23% Similarity=0.326 Sum_probs=166.3
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCC--CceeEEEECCccCCCc-----CccceEEEEcCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL--RLYGRVTYNGHNMDEF-----VPQRTAAYISQHD 236 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 236 (1412)
+++++|+|+|++|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++
T Consensus 15 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 94 (252)
T PRK14272 15 GDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKP 94 (252)
T ss_pred CCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccC
Confidence 34569999999999999999999999999999999999987631 1379999999887531 1235799999998
Q ss_pred CcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC----cc
Q 000576 237 VHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD----VC 312 (1412)
Q Consensus 237 ~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~ 312 (1412)
.+++.+|++||+.++....+... .+ +.....+..++.+++. +.
T Consensus 95 ~~~~~~t~~enl~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~~~l~~~l~~~ 141 (252)
T PRK14272 95 NPFPTMSVFDNVVAGLKLAGIRD-RD--------------------------------HLMEVAERSLRGAALWDEVKDR 141 (252)
T ss_pred ccCcCCCHHHHHHHHHHhcCCCC-HH--------------------------------HHHHHHHHHHHHcCcchhhhhh
Confidence 88888999999987643221100 00 0011123344445443 22
Q ss_pred ccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000576 313 ADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDL 392 (1412)
Q Consensus 313 ~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~ 392 (1412)
.+ ..++.||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++++ +++++.++|+..++.++
T Consensus 142 ~~-----~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~ 213 (252)
T PRK14272 142 LK-----TPATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK---VTTIIIVTHNMHQAARV 213 (252)
T ss_pred hc-----CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHh
Confidence 23 33457999999999999999999999999999999999999999999999743 46777789999999999
Q ss_pred cCeEEEEeCCeEEEecChhhHH
Q 000576 393 FDDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 393 ~D~vivL~~G~iv~~G~~~~~~ 414 (1412)
+|++++|++|++++.|+++++.
T Consensus 214 ~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 214 SDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred CCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999988874
No 455
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=318.08 Aligned_cols=212 Identities=21% Similarity=0.303 Sum_probs=166.1
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCC--CceeEEEECCccCCC-c---CccceEEEEcCCCC
Q 000576 164 KHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL--RLYGRVTYNGHNMDE-F---VPQRTAAYISQHDV 237 (1412)
Q Consensus 164 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~-~---~~~~~~~yv~Q~d~ 237 (1412)
+++++|+|+|++|++||+++|+||||||||||+++|+|.++++. ..+|+|.++|.++.. . ..++.++|++|++.
T Consensus 14 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~ 93 (249)
T PRK14253 14 GENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPN 93 (249)
T ss_pred CCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCC
Confidence 34569999999999999999999999999999999999987520 137999999987642 1 12357999999887
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
+++ .||+||+.++....+...+ ......++..++.+|+.+......
T Consensus 94 ~~~-~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~l~~~~~~~~ 139 (249)
T PRK14253 94 PFP-MSIYENVAYGLRAQGIKDK---------------------------------KVLDEVVERSLRGAALWDEVKDRL 139 (249)
T ss_pred cCc-ccHHHHHHhHHHhcCCCch---------------------------------HHHHHHHHHHHHHcCCchhhhHHh
Confidence 776 8999999886432211000 001112344566666643221111
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
+.....|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++++ +++|+.++|+.+++.+++|+++
T Consensus 140 -~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tii~~sh~~~~~~~~~d~i~ 215 (249)
T PRK14253 140 -KSHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK---NYTIVIVTHSMQQARRISDRTA 215 (249)
T ss_pred -hcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEecCHHHHHHhCCEEE
Confidence 234457999999999999999999999999999999999999999999999853 3677778999999999999999
Q ss_pred EEeCCeEEEecChhhH
Q 000576 398 LISDGQIVYQGPREHV 413 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~ 413 (1412)
+|++|++++.|+.+++
T Consensus 216 ~l~~G~i~~~g~~~~~ 231 (249)
T PRK14253 216 FFLMGELVEHDDTQVI 231 (249)
T ss_pred EEECCEEEEeCCHHHH
Confidence 9999999999998776
No 456
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.3e-33 Score=279.53 Aligned_cols=202 Identities=28% Similarity=0.406 Sum_probs=172.2
Q ss_pred cccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc-------cceEEEEc
Q 000576 161 SRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP-------QRTAAYIS 233 (1412)
Q Consensus 161 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~ 233 (1412)
...+..+||++|++.|++||-++|+||+||||||||-+|+|+.+|+ +|+|.+.|+++..... .+.+|+|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 3446778999999999999999999999999999999999999998 8999999999876543 26799999
Q ss_pred CCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccc
Q 000576 234 QHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCA 313 (1412)
Q Consensus 234 Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 313 (1412)
|...++|+||..||+...+.+++...+ + ........|+.+||.+..
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~----------------------~------------~~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSA----------------------D------------SRAGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCccc----------------------c------------HHHHHHHHHHHhCccccc
Confidence 999999999999999998877653211 0 112234578999999877
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000576 314 DTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLF 393 (1412)
Q Consensus 314 dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~ 393 (1412)
+.+. .+|||||+|||+||||+...|+|||-||||-.||..|..+|.+.|-.+.+. .++|++.++|+. ....-|
T Consensus 141 ~HyP-----~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre-~G~TlVlVTHD~-~LA~Rc 213 (228)
T COG4181 141 THYP-----AQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRE-RGTTLVLVTHDP-QLAARC 213 (228)
T ss_pred ccCc-----cccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhh-cCceEEEEeCCH-HHHHhh
Confidence 6554 479999999999999999999999999999999999999999999998764 578888787775 566788
Q ss_pred CeEEEEeCCeEEE
Q 000576 394 DDIILISDGQIVY 406 (1412)
Q Consensus 394 D~vivL~~G~iv~ 406 (1412)
||.+-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999974
No 457
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=2.4e-33 Score=307.80 Aligned_cols=196 Identities=28% Similarity=0.331 Sum_probs=166.2
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 1 l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 65 (201)
T cd03231 1 LEADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLD 65 (201)
T ss_pred CEEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecc
Confidence 35788888773 23589999999999999999999999999999999997654 4799999998753
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 895 Q--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 895 ~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
. ..+++.++|++|++.+++.+|++|++.+.... . .++.++++++.+++.+..+..+ ..||||||
T Consensus 66 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 131 (201)
T cd03231 66 FQRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQ 131 (201)
T ss_pred cccHHhhhheEEeccccccCCCcCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCch-----hhCCHHHH
Confidence 2 23456789999998888899999999875311 1 1345788999999987666543 47999999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEE
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLL 1040 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll 1040 (1412)
||++|||+|+.+|++|+|||||+|||+.+...+++.|+++.+.|+|+|+++|++. ++.+.+|+++++
T Consensus 132 qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 132 RRVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 9999999999999999999999999999999999999998777999999999986 577788998876
No 458
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=318.83 Aligned_cols=216 Identities=19% Similarity=0.247 Sum_probs=171.9
Q ss_pred cccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCC--CceeEEEECCccCCCc-----CccceEEE
Q 000576 159 LSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL--RLYGRVTYNGHNMDEF-----VPQRTAAY 231 (1412)
Q Consensus 159 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~y 231 (1412)
.+.+++++.+|+|+|+++++||+++|+||||||||||+++|+|.++|.. ..+|+|+++|+++... ..++.++|
T Consensus 14 ~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~ 93 (261)
T PRK14263 14 DKIFYGNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGM 93 (261)
T ss_pred EEEEeCCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEE
Confidence 3444566779999999999999999999999999999999999997610 1379999999987432 12356999
Q ss_pred EcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCc
Q 000576 232 ISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDV 311 (1412)
Q Consensus 232 v~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~ 311 (1412)
++|++.++ .+|++||+.++....+. + . +....++.+++.+||.+
T Consensus 94 v~q~~~~~-~~tv~enl~~~~~~~~~----~--~-----------------------------~~~~~~~~~l~~~~l~~ 137 (261)
T PRK14263 94 VFQQPNPF-SMSIFDNVAFGLRLNRY----K--G-----------------------------DLGDRVKHALQGAALWD 137 (261)
T ss_pred EecCCccc-cccHHHHHHHHHhhcCc----h--H-----------------------------HHHHHHHHHHHHcCCch
Confidence 99987666 69999999987543210 0 0 01123455677888754
Q ss_pred cccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHh
Q 000576 312 CADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYD 391 (1412)
Q Consensus 312 ~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~ 391 (1412)
..+... ++..+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ +++++.++|+..++.+
T Consensus 138 ~i~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~---~~tii~isH~~~~i~~ 213 (261)
T PRK14263 138 EVKDKL-KVSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKK---DYTIALVTHNMQQAIR 213 (261)
T ss_pred hhhhhh-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHH
Confidence 332222 234567999999999999999999999999999999999999999999999742 4677778999999999
Q ss_pred hcCeEEEEe--------CCeEEEecChhhHH
Q 000576 392 LFDDIILIS--------DGQIVYQGPREHVL 414 (1412)
Q Consensus 392 ~~D~vivL~--------~G~iv~~G~~~~~~ 414 (1412)
++|++++|+ +|++++.|+.+++.
T Consensus 214 ~~d~v~~l~~~~~~~~~~G~i~~~g~~~~~~ 244 (261)
T PRK14263 214 VADTTAFFSVDISQGTRTGYLVEMGPTAQIF 244 (261)
T ss_pred hCCEEEEEecccccccCCceEEEeCCHHHHH
Confidence 999999996 89999999988864
No 459
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=7.7e-34 Score=320.26 Aligned_cols=211 Identities=25% Similarity=0.401 Sum_probs=163.5
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++. ..+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (237)
T cd03252 1 ITFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVP--ENGRVLVDGHDLA 67 (237)
T ss_pred CEEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCeehH
Confidence 367888887741 124589999999999999999999999999999999997654 4799999998753
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhccc-C-----CCCCC
Q 000576 895 Q---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALV-G-----LPGVN 965 (1412)
Q Consensus 895 ~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~v-g-----~~~~~ 965 (1412)
. ..+++.++|++|++.+++ .||.||+.+... .... ..+.+.++..++.+..+.+. + .....
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~----~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 137 (237)
T cd03252 68 LADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSM----ERVIEAAKLAGAHDFISELPEGYDTIVGEQGA 137 (237)
T ss_pred hcCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCH----HHHHHHHHHcCcHHHHHhCcccccchhhcCCC
Confidence 2 234567999999987764 699999976421 1111 11223333334333222110 0 11245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ |+|||+++|+++ .+ +.+|++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA-GRTVIIIAHRLS-TV-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH-HH-HhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999864 899999999987 34 56999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 9999875
No 460
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=5.1e-33 Score=318.57 Aligned_cols=225 Identities=24% Similarity=0.332 Sum_probs=179.4
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++||++.++... ..+. ..++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 3 ~l~~~nl~~~~~~~~---~~~~-~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~sG~i~~~g~~~ 76 (268)
T PRK10419 3 LLNVSGLSHHYAHGG---LSGK-HQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESP--SQGNVSWRGEPL 76 (268)
T ss_pred eEEEeceEEEecCCc---cccc-cCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEec
Confidence 378999998874100 0000 0135699999999999999999999999999999999997553 489999999875
Q ss_pred Ccc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCCC
Q 000576 894 KQE------TFARISGYCEQND--IHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN-LLRQALVGLPGV 964 (1412)
Q Consensus 894 ~~~------~~~~~~~yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~ 964 (1412)
... ..++.++|++|+. .+.+..|+.|++.+..... ......+....++++++.+++. ...+.. .
T Consensus 77 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 149 (268)
T PRK10419 77 AKLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----P 149 (268)
T ss_pred cccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----C
Confidence 431 2356799999997 3667899999987643211 1122334455688999999986 444543 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|++. ++.+.+|++++|++
T Consensus 150 ~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~- 227 (268)
T PRK10419 150 PQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN- 227 (268)
T ss_pred ccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-
Confidence 479999999999999999999999999999999999999999999998764 899999999986 57778999999985
Q ss_pred cEEEEEcCCC
Q 000576 1044 GQEIYVGPLG 1053 (1412)
Q Consensus 1044 G~~~y~G~~~ 1053 (1412)
|++++.|+..
T Consensus 228 G~i~~~g~~~ 237 (268)
T PRK10419 228 GQIVETQPVG 237 (268)
T ss_pred CEEeeeCChh
Confidence 8999999864
No 461
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-34 Score=305.67 Aligned_cols=197 Identities=24% Similarity=0.391 Sum_probs=171.4
Q ss_pred eceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC-------ccceEEEEcCCCCcCCCC
Q 000576 170 KGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV-------PQRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 170 ~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~l 242 (1412)
=++++..+.--+|||-|+||||||||+|+|+|+..|+ +|.|.+||+.+.+.. .+|++|||+|+-.+||++
T Consensus 15 l~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~ 91 (352)
T COG4148 15 LDANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHY 91 (352)
T ss_pred EEEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccce
Confidence 3578888776799999999999999999999999998 899999998764322 148899999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
||+.||.|+...- .....|.+.+.||+.|..+.+ +
T Consensus 92 tVrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~-----P 126 (352)
T COG4148 92 TVRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRY-----P 126 (352)
T ss_pred EEecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhC-----C
Confidence 9999999985321 011246688899999988744 5
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
..|||||||||+|||||++.|++|+||||.+.||-....+|+-.|+++.++. ..-|+.++|..+|+.+++|+|++|++|
T Consensus 127 ~~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~-~IPIlYVSHS~~Ev~RLAd~vV~le~G 205 (352)
T COG4148 127 GTLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEI-NIPILYVSHSLDEVLRLADRVVVLENG 205 (352)
T ss_pred CccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhc-CCCEEEEecCHHHHHhhhheEEEecCC
Confidence 5799999999999999999999999999999999999999999999998754 566778999999999999999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
++...|+.+++..
T Consensus 206 kV~A~g~~e~v~~ 218 (352)
T COG4148 206 KVKASGPLEEVWG 218 (352)
T ss_pred eEEecCcHHHHhc
Confidence 9999999998853
No 462
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-33 Score=320.96 Aligned_cols=216 Identities=27% Similarity=0.395 Sum_probs=171.5
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCC-----CCceeEEEECCccCCCcCc---cceEEEEcC
Q 000576 163 KKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS-----LRLYGRVTYNGHNMDEFVP---QRTAAYISQ 234 (1412)
Q Consensus 163 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-----~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 234 (1412)
++++.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|.++..... ++.++|++|
T Consensus 11 ~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q 90 (272)
T PRK13547 11 RRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQ 90 (272)
T ss_pred ECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecc
Confidence 34456999999999999999999999999999999999999874 0126999999998754322 346899999
Q ss_pred CCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccc
Q 000576 235 HDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCAD 314 (1412)
Q Consensus 235 ~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d 314 (1412)
++..++.+||+||+.++...... ... ... .+....++.+++.+||++..+
T Consensus 91 ~~~~~~~~tv~e~l~~~~~~~~~--~~~-------------~~~---------------~~~~~~~~~~l~~~~l~~~~~ 140 (272)
T PRK13547 91 AAQPAFAFSAREIVLLGRYPHAR--RAG-------------ALT---------------HRDGEIAWQALALAGATALVG 140 (272)
T ss_pred cCCCCCCCcHHHHHhhccccccc--ccc-------------cCC---------------HHHHHHHHHHHHHcCcHhhhc
Confidence 87666779999999875311000 000 000 011123566888999976555
Q ss_pred ccccCcccccCChhhhhHHHHHHHHh---------CCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecC
Q 000576 315 TMVGDEMIRGISGGQRKRVTTGEMLV---------GPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQP 385 (1412)
Q Consensus 315 t~vg~~~~~~LSGGqkqRvsiA~aL~---------~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~ 385 (1412)
+. +..|||||||||+||++|+ .+|++|+|||||+|||+.+...+.+.|+++.+. .+++|+.++|+
T Consensus 141 ~~-----~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tviiisH~ 214 (272)
T PRK13547 141 RD-----VTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARD-WNLGVLAIVHD 214 (272)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEECC
Confidence 44 4479999999999999999 599999999999999999999999999998653 25667778999
Q ss_pred hhhHHhhcCeEEEEeCCeEEEecChhhHH
Q 000576 386 APEAYDLFDDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 386 ~~~~~~~~D~vivL~~G~iv~~G~~~~~~ 414 (1412)
..++.+++|++++|++|++++.|+.+++.
T Consensus 215 ~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 215 PNLAARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHHHHhCCEEEEEECCeEEEecCHHHHc
Confidence 99999999999999999999999987763
No 463
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.4e-33 Score=348.80 Aligned_cols=220 Identities=21% Similarity=0.329 Sum_probs=181.2
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++|+ ++.+|+|||+++++||++||+||||||||||+++|+|...+++.+|+|.++|.++.
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 67899998874 24699999999999999999999999999999999997654224799999998764
Q ss_pred ccc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCchhh-hcccCCCCCCCCC
Q 000576 895 QET----FARISGYCEQNDIHSPQVTVYESLLYSAWLRLSP-EVDSKTRKMFIEEVMELVELNLLR-QALVGLPGVNGLS 968 (1412)
Q Consensus 895 ~~~----~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~-~~~vg~~~~~~lS 968 (1412)
... .++.+||++|++.+++.+||+|++.+........ ....++.++.++++++.+++.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 311 2356899999998899999999998764332111 112233445688899999997643 232 34799
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 969 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 969 gGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
|||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. .+.+.||++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999986 57788999999986 79999
Q ss_pred EcCCCC
Q 000576 1049 VGPLGR 1054 (1412)
Q Consensus 1049 ~G~~~~ 1054 (1412)
.|+...
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 998753
No 464
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-33 Score=316.80 Aligned_cols=212 Identities=22% Similarity=0.297 Sum_probs=166.4
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCC--CCCceeEEEECCccCCCc-----CccceEEEEcCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDS--SLRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDV 237 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 237 (1412)
++.+|+|+|+++++||+++|+||||||||||+++|+|..++ +...+|+|.++|+++... ..++.++|++|++.
T Consensus 18 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 97 (253)
T PRK14261 18 EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPN 97 (253)
T ss_pred CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCc
Confidence 34699999999999999999999999999999999998753 111379999999987543 12356999999987
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
+++ .||+||+.|+.+..+.... .+....++.+++.+++.+...+..
T Consensus 98 ~~~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~ 143 (253)
T PRK14261 98 PFP-KSIYENVAYGPRIHGEKNK---------------------------------KTLDTIVEKSLKGAALWDEVKDRL 143 (253)
T ss_pred cCc-ccHHHHHHhhHHhcCCCCH---------------------------------HHHHHHHHHHHHHhcCchhhHHHh
Confidence 776 5999999987543211000 001112344566677643211111
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
++..+.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ +.+|+.++|+.+++.+++|+++
T Consensus 144 -~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~---~~tvii~sh~~~~~~~~~d~v~ 219 (253)
T PRK14261 144 -HDSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK---EYTVIIVTHNMQQAARVSDYTG 219 (253)
T ss_pred -hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh---CceEEEEEcCHHHHHhhCCEEE
Confidence 234557999999999999999999999999999999999999999999999754 3567778999999999999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000576 398 LISDGQIVYQGPREHVL 414 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~ 414 (1412)
+|++|+++..|+.+++.
T Consensus 220 ~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 220 FMYLGKLIEFDKTTQIF 236 (253)
T ss_pred EEECCEEEEcCCHHHHH
Confidence 99999999999988764
No 465
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=7.7e-33 Score=315.09 Aligned_cols=220 Identities=23% Similarity=0.289 Sum_probs=175.0
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++ .+.+|+|||+++++||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 488999998874 2359999999999999999999999999999999999621123579999999876
Q ss_pred Ccc---cccc-eEEEeccCCCCCCCCCHHHHHHHHHHhcCC----CCCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCCC
Q 000576 894 KQE---TFAR-ISGYCEQNDIHSPQVTVYESLLYSAWLRLS----PEVDSKTRKMFIEEVMELVELN-LLRQALVGLPGV 964 (1412)
Q Consensus 894 ~~~---~~~~-~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~----~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~ 964 (1412)
... ...+ .++|++|++.+++.+|+.|++.+....... .+....+..+.++++++.+++. ...+...+
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 2222 478999999999999999998765432110 1111222335678889999986 34443321
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-hccEeEEecC
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLLKRG 1043 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~-fD~v~ll~~g 1043 (1412)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEeC-
Confidence 249999999999999999999999999999999999999999999998877999999999986 34444 799999985
Q ss_pred cEEEEEcCC
Q 000576 1044 GQEIYVGPL 1052 (1412)
Q Consensus 1044 G~~~y~G~~ 1052 (1412)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 899999986
No 466
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-33 Score=319.28 Aligned_cols=213 Identities=23% Similarity=0.298 Sum_probs=173.9
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC---CeEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT---GYVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 890 (1412)
.++++|+++.+. .+.+|+|+|+.|++||+++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 589999998874 23599999999999999999999999999999999997542 12479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch----hhhcccCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL----LRQALVGL 961 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~vg~ 961 (1412)
.++.. ...++.++|++|+..+++. ||.||+.+....+. ... ..++.++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2345679999999887775 99999987654432 112 23456788999998853 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEe-EE
Q 000576 962 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF-LL 1040 (1412)
Q Consensus 962 ~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~-ll 1040 (1412)
...||||||||++|||+|+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 357999999999999999999999999999999999999999999999976 489999999986 5777899975 56
Q ss_pred ecCcEEEEEcCC
Q 000576 1041 KRGGQEIYVGPL 1052 (1412)
Q Consensus 1041 ~~gG~~~y~G~~ 1052 (1412)
+ .|+++..|+.
T Consensus 254 ~-~G~i~~~g~~ 264 (285)
T PRK14254 254 T-GGELVEFDDT 264 (285)
T ss_pred e-CCEEEEeCCH
Confidence 6 4899998875
No 467
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-33 Score=318.73 Aligned_cols=218 Identities=22% Similarity=0.243 Sum_probs=173.0
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--C-CeEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT--T-GYVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 890 (1412)
.++++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 589999999874 1358999999999999999999999999999999999653 1 12579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch-hhhcccCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL-LRQALVGLPGV 964 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~vg~~~~ 964 (1412)
.++.. ..+++.++|++|++.+++ .||+||+.+....+. .......++.+.+.++.+++.. +.+.. .. ..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~-~~-~~ 165 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRL-HD-NA 165 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHH-hc-Cc
Confidence 87632 234567999999988877 499999987653321 1112222344667777765431 21111 11 23
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|++ |
T Consensus 166 ~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~~-G 242 (271)
T PRK14238 166 YGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFLN-G 242 (271)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999875 799999999987 57788999999985 8
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
++++.|+.
T Consensus 243 ~i~~~g~~ 250 (271)
T PRK14238 243 YVNEYDDT 250 (271)
T ss_pred EEEEeCCH
Confidence 99999875
No 468
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2e-33 Score=322.92 Aligned_cols=235 Identities=26% Similarity=0.398 Sum_probs=193.5
Q ss_pred cCCCcccCCCCceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCe
Q 000576 802 KRRGMVLPFEPHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGY 881 (1412)
Q Consensus 802 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~ 881 (1412)
..+.|.+|.+...+.++++++..+ ..++.+|+|+||.+.+||.+||+||||||||||.++|.|...+
T Consensus 322 ~~~~m~LP~P~g~L~Ve~l~~~PP-----------g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p-- 388 (580)
T COG4618 322 AAERMPLPAPQGALSVERLTAAPP-----------GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPP-- 388 (580)
T ss_pred ccCCCCCCCCCceeeEeeeeecCC-----------CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHccccc--
Confidence 345688888888999999998432 2356899999999999999999999999999999999997654
Q ss_pred EEEEEEEcCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHH-----HHHHHHHHHHHHcCCch
Q 000576 882 VTGNITISGYPKKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSK-----TRKMFIEEVMELVELNL 953 (1412)
Q Consensus 882 ~~G~i~i~g~~~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~-----~~~~~v~~~l~~l~l~~ 953 (1412)
.+|.|++||.+.++ +.+-+.+||.||+-.+++. ||.||+. |+..+.+.+ .+...|.|++- .+.+
T Consensus 389 ~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~G-TIaeNIa-----Rf~~~~d~~kIieAA~lAgvHelIl--~lP~ 460 (580)
T COG4618 389 TSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDG-TIAENIA-----RFGEEADPEKVIEAARLAGVHELIL--RLPQ 460 (580)
T ss_pred CCCcEEecchhhhcCCHHHhccccCcCcccceecCC-cHHHHHH-----hccccCCHHHHHHHHHHcChHHHHH--hCcC
Confidence 47999999998765 4567899999998888775 9999994 433333332 12233444443 3445
Q ss_pred hhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh
Q 000576 954 LRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA 1033 (1412)
Q Consensus 954 ~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~ 1033 (1412)
-.|+.+|.. ...||||||||+++||||-.+|.+++||||-|+||.+....+.+.|...+++|+|+|+++|.|+ +...
T Consensus 461 GYdT~iG~~-G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs--~L~~ 537 (580)
T COG4618 461 GYDTRIGEG-GATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPS--ALAS 537 (580)
T ss_pred CccCccCCC-CCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHH--HHhh
Confidence 568888865 4689999999999999999999999999999999999999999999999999999999999997 6889
Q ss_pred hccEeEEecCcEEEEEcCCCCCchHHHHhhhc
Q 000576 1034 FDELFLLKRGGQEIYVGPLGRHSSHLIKYFEG 1065 (1412)
Q Consensus 1034 fD~v~ll~~gG~~~y~G~~~~~~~~~~~yF~~ 1065 (1412)
+|+|++|+ +|++--|||. ++++.-...
T Consensus 538 ~Dkilvl~-~G~~~~FG~r----~eVLa~~~~ 564 (580)
T COG4618 538 VDKILVLQ-DGRIAAFGPR----EEVLAKVLR 564 (580)
T ss_pred cceeeeec-CChHHhcCCH----HHHHHHhcC
Confidence 99999998 5899999997 566665543
No 469
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1e-31 Score=348.04 Aligned_cols=213 Identities=27% Similarity=0.411 Sum_probs=176.6
Q ss_pred CceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCc
Q 000576 812 PHSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGY 891 (1412)
Q Consensus 812 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~ 891 (1412)
...++++||+|+|+. +.+.+|+|+|+.|+|||++||+|+||||||||+++|+|...+ .+|+|.+||.
T Consensus 453 ~~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p--~~G~I~idg~ 519 (694)
T TIGR01846 453 RGAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTP--QHGQVLVDGV 519 (694)
T ss_pred CCeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCE
Confidence 346999999999852 224589999999999999999999999999999999997654 4799999999
Q ss_pred cCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchh-------hhcccCC
Q 000576 892 PKKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLL-------RQALVGL 961 (1412)
Q Consensus 892 ~~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~ 961 (1412)
++++ ..+++.++||+|++.+++ .|++||+.+.. ++.++ +.+.++++..++.+. .|+.+|.
T Consensus 520 ~i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~~----~~i~~a~~~~~l~~~i~~lp~gl~t~i~~ 589 (694)
T TIGR01846 520 DLAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAPF----EHVIHAAKLAGAHDFISELPQGYNTEVGE 589 (694)
T ss_pred ehhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCCH----HHHHHHHHHcChHHHHHhCcCccCcEecC
Confidence 8654 456788999999988776 59999997531 12222 335666777766543 3455555
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEe
Q 000576 962 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLK 1041 (1412)
Q Consensus 962 ~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~ 1041 (1412)
. ..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. .++|+|+++|+++ ..+.||++++|+
T Consensus 590 ~-g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~ 665 (694)
T TIGR01846 590 K-GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLE 665 (694)
T ss_pred C-CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEe
Confidence 4 46799999999999999999999999999999999999999999999985 5899999999986 456799999998
Q ss_pred cCcEEEEEcCC
Q 000576 1042 RGGQEIYVGPL 1052 (1412)
Q Consensus 1042 ~gG~~~y~G~~ 1052 (1412)
+ |+++..|+.
T Consensus 666 ~-G~i~~~g~~ 675 (694)
T TIGR01846 666 K-GQIAESGRH 675 (694)
T ss_pred C-CEEEEeCCH
Confidence 5 899999985
No 470
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=317.39 Aligned_cols=212 Identities=21% Similarity=0.360 Sum_probs=166.1
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCC--CCCCceeEEEECCccCCCc-----CccceEEEEcCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDV 237 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 237 (1412)
.+++|+|+|++|++||+++|+||||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|++.
T Consensus 16 ~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~ 95 (251)
T PRK14251 16 NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPT 95 (251)
T ss_pred CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCc
Confidence 3469999999999999999999999999999999999986 2111379999999886431 12456999999877
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
+++ .||+||+.++....+.... +..+..++.+++.+|+........
T Consensus 96 ~~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 141 (251)
T PRK14251 96 PFP-FSVYDNVAYGLKIAGVKDK---------------------------------ELIDQRVEESLKQAAIWKETKDNL 141 (251)
T ss_pred cCC-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchHHHh
Confidence 665 7999999886432211000 001122455677788742210111
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
++.+..||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++.+ +++|+.++|+..++.+++|+|+
T Consensus 142 -~~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiiiisH~~~~~~~~~d~i~ 217 (251)
T PRK14251 142 -DRNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH---QYTFIMVTHNLQQAGRISDQTA 217 (251)
T ss_pred -ccChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc---CCeEEEEECCHHHHHhhcCEEE
Confidence 234557999999999999999999999999999999999999999999999743 4677778999999999999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000576 398 LISDGQIVYQGPREHVL 414 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~ 414 (1412)
+|++|+++..|+.+++.
T Consensus 218 ~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 218 FLMNGDLIEAGPTEEMF 234 (251)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988764
No 471
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=9.4e-32 Score=342.21 Aligned_cols=213 Identities=25% Similarity=0.359 Sum_probs=176.9
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++||+++|+. .++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 329 ~~i~~~~v~f~y~~-----------~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~--~~G~I~i~g~~ 395 (571)
T TIGR02203 329 GDVEFRNVTFRYPG-----------RDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEP--DSGQILLDGHD 395 (571)
T ss_pred CeEEEEEEEEEcCC-----------CCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCeEEECCEe
Confidence 36999999999852 124589999999999999999999999999999999997664 37999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh-------hcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR-------QALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~vg~~ 962 (1412)
+++ ..+++.++||+|++.+++ -|++||+.+.. +.+.+ ++.++++++.+++.+.. |+.+|..
T Consensus 396 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~ 466 (571)
T TIGR02203 396 LADYTLASLRRQVALVSQDVVLFN-DTIANNIAYGR----TEQAD----RAEIERALAAAYAQDFVDKLPLGLDTPIGEN 466 (571)
T ss_pred HHhcCHHHHHhhceEEccCccccc-ccHHHHHhcCC----CCCCC----HHHHHHHHHHcChHHHHHhCcCcccceecCC
Confidence 643 456778999999998775 59999997542 11222 23467788888876543 4455544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
.++||||||||++|||+++++|+|++||||||+||..+++.+++.|+++. +++|+|++||+++ ..+.||++++|++
T Consensus 467 -g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~-~~~tiIiitH~~~--~~~~~D~ii~l~~ 542 (571)
T TIGR02203 467 -GVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM-QGRTTLVIAHRLS--TIEKADRIVVMDD 542 (571)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh-CCCEEEEEehhhH--HHHhCCEEEEEeC
Confidence 45799999999999999999999999999999999999999999999885 4799999999985 5788999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|+++..|+.
T Consensus 543 -g~i~~~g~~ 551 (571)
T TIGR02203 543 -GRIVERGTH 551 (571)
T ss_pred -CEEEeeCCH
Confidence 899988874
No 472
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.5e-33 Score=348.53 Aligned_cols=211 Identities=20% Similarity=0.319 Sum_probs=180.2
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|++++++ ++.+|+|+|+++++||++||+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPP--DSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 489999999884 23599999999999999999999999999999999997654 479999999876
Q ss_pred Ccc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQE---T-FARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~~---~-~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
... . .++.+||++|++.+++.+||+|++.+... . ..+.++.++++++.+++.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 431 1 12458999999999999999999987531 1 1223456788999999987666554 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+.||++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999878999999999986 57788999999985 899999
Q ss_pred cCCC
Q 000576 1050 GPLG 1053 (1412)
Q Consensus 1050 G~~~ 1053 (1412)
|+..
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 9874
No 473
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-33 Score=319.39 Aligned_cols=211 Identities=18% Similarity=0.259 Sum_probs=163.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCC--CCCCceeEEEECCccCCCcC-----ccceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRLYGRVTYNGHNMDEFV-----PQRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 238 (1412)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +....+|+|.++|+++.... .++.++|++|++.+
T Consensus 34 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 113 (268)
T PRK14248 34 KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREIGMVFQKPNP 113 (268)
T ss_pred ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccEEEEecCCcc
Confidence 459999999999999999999999999999999999864 10012799999999875321 23579999999877
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++ .||+||+.++.+..+... + ...+..++..++.+++........
T Consensus 114 ~~-~tv~enl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 158 (268)
T PRK14248 114 FP-KSIYNNITHALKYAGERR--K-------------------------------SVLDEIVEESLTKAALWDEVKDRL- 158 (268)
T ss_pred Cc-ccHHHHHHHHHHhcCCCc--H-------------------------------HHHHHHHHHHHHHcCCCcchHHHH-
Confidence 76 499999988643211000 0 000112344566677642111111
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
++.+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ +++|+.++|+.+++.+++|++++
T Consensus 159 ~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~v~~ 235 (268)
T PRK14248 159 HSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE---EYSIIIVTHNMQQALRVSDRTAF 235 (268)
T ss_pred hcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc---CCEEEEEEeCHHHHHHhCCEEEE
Confidence 234557999999999999999999999999999999999999999999999843 35677789999999999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000576 399 ISDGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~ 414 (1412)
|++|++++.|+.+++.
T Consensus 236 l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 236 FLNGDLVEYDQTEQIF 251 (268)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 474
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=3.3e-33 Score=355.60 Aligned_cols=209 Identities=24% Similarity=0.414 Sum_probs=166.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 242 (1412)
+++|+|+|+++++||.++|+|+||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++ ++++.
T Consensus 345 ~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~-~lf~~ 420 (571)
T TIGR02203 345 RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPD---SGQILLDGHDLADYTLASLRRQVALVSQDV-VLFND 420 (571)
T ss_pred CccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCeEEECCEeHHhcCHHHHHhhceEEccCc-ccccc
Confidence 35899999999999999999999999999999999999997 7999999998876543 46799999975 55577
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|++|||.++..- +.+.+.+.++....+ .+..++ .|++..||.+|+.+
T Consensus 421 Ti~~Ni~~~~~~------------------------~~~~~~i~~~l~~~~------l~~~i~--~lp~gldt~i~~~g- 467 (571)
T TIGR02203 421 TIANNIAYGRTE------------------------QADRAEIERALAAAY------AQDFVD--KLPLGLDTPIGENG- 467 (571)
T ss_pred cHHHHHhcCCCC------------------------CCCHHHHHHHHHHcC------hHHHHH--hCcCcccceecCCC-
Confidence 999999976310 011111111110000 111111 36778899999875
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
+.||||||||++||||++.+|+|++||||||+||..++..|.+.|++.. +++|+|.++|+. ...+.+|+|++|++|
T Consensus 468 ~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~---~~~tiIiitH~~-~~~~~~D~ii~l~~g 543 (571)
T TIGR02203 468 VLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM---QGRTTLVIAHRL-STIEKADRIVVMDDG 543 (571)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh---CCCEEEEEehhh-HHHHhCCEEEEEeCC
Confidence 4799999999999999999999999999999999999999999999863 245666577775 567889999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
+++..|+++++.+
T Consensus 544 ~i~~~g~~~~l~~ 556 (571)
T TIGR02203 544 RIVERGTHNELLA 556 (571)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999999864
No 475
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-33 Score=317.10 Aligned_cols=218 Identities=20% Similarity=0.249 Sum_probs=173.8
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC--C-eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT--G-YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g 890 (1412)
.++++|++++++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 588999998874 23589999999999999999999999999999999996431 1 2479999999
Q ss_pred ccCC-----cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKK-----QETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~-----~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++. ...+++.++|++|++.+++ .|+.||+.+....+. .. ...++.++++++.+++.+..+.... ....
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLK-QSGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhc-CCcc
Confidence 8753 1234567899999988777 499999987653321 11 1223456677888777432111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec---
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR--- 1042 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~--- 1042 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.||++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999875 589999999987 68899999999982
Q ss_pred -----CcEEEEEcCC
Q 000576 1043 -----GGQEIYVGPL 1052 (1412)
Q Consensus 1043 -----gG~~~y~G~~ 1052 (1412)
.|+++..|+.
T Consensus 229 ~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 229 EGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccCceEEEeCCH
Confidence 4899999985
No 476
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-33 Score=298.74 Aligned_cols=169 Identities=28% Similarity=0.445 Sum_probs=149.4
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|++++++ ...+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~ 65 (173)
T cd03230 1 IEVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKP--DSGEIKVLGKDIK 65 (173)
T ss_pred CEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEcc
Confidence 35788888763 13589999999999999999999999999999999997654 4799999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHH
Q 000576 895 Q--ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQR 972 (1412)
Q Consensus 895 ~--~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqr 972 (1412)
. ..+++.++|++|++.+++..|+.|++. ||||||
T Consensus 66 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~ 101 (173)
T cd03230 66 KEPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMK 101 (173)
T ss_pred cchHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHH
Confidence 3 234567999999998888899999862 899999
Q ss_pred HHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecC
Q 000576 973 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRG 1043 (1412)
Q Consensus 973 qRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~g 1043 (1412)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|+++ .+.+.+|++++|++|
T Consensus 102 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 102 QRLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999877899999999987 577789999999864
No 477
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-34 Score=291.30 Aligned_cols=218 Identities=25% Similarity=0.368 Sum_probs=186.2
Q ss_pred hhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCcc---ceEEEEc
Q 000576 157 NILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVPQ---RTAAYIS 233 (1412)
Q Consensus 157 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~ 233 (1412)
.++++.++.+.+|+|+|..|++|.+|+++|||||||||||.++++++..+ +|+|+++|.++.....+ +.++..-
T Consensus 5 ~nv~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~lSILk 81 (252)
T COG4604 5 ENVSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKLSILK 81 (252)
T ss_pred hhhhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHHHHHH
Confidence 45677888999999999999999999999999999999999999999887 89999999998776543 6678888
Q ss_pred CCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccc
Q 000576 234 QHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCA 313 (1412)
Q Consensus 234 Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 313 (1412)
|+...-..+||||-+.||.--..-| | + ..+....++..++.|+|++..
T Consensus 82 Q~N~i~~rlTV~dLv~FGRfPYSqG-R-----------------l--------------t~eD~~~I~~aieyl~L~~l~ 129 (252)
T COG4604 82 QENHINSRLTVRDLVGFGRFPYSQG-R-----------------L--------------TKEDRRIINEAIEYLHLEDLS 129 (252)
T ss_pred hhchhhheeEHHHHhhcCCCcccCC-C-----------------C--------------chHHHHHHHHHHHHhcccchH
Confidence 9877778899999999984211100 0 0 012334577888999998777
Q ss_pred cccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000576 314 DTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLF 393 (1412)
Q Consensus 314 dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~ 393 (1412)
|.. ...||||||||.-||..++.+.+.++||||.+.||.....++++.|++++++.++|+|+ +.|+...+..++
T Consensus 130 dry-----Ld~LSGGQrQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~Ktivi-VlHDINfAS~Ys 203 (252)
T COG4604 130 DRY-----LDELSGGQRQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVV-VLHDINFASCYS 203 (252)
T ss_pred HHh-----HHhcccchhhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEE-EEecccHHHhhh
Confidence 644 55799999999999999999999999999999999999999999999999988666555 789999999999
Q ss_pred CeEEEEeCCeEEEecChhhHHH
Q 000576 394 DDIILISDGQIVYQGPREHVLE 415 (1412)
Q Consensus 394 D~vivL~~G~iv~~G~~~~~~~ 415 (1412)
|+|+-|.+|+++.+|+++++.+
T Consensus 204 D~IVAlK~G~vv~~G~~~eii~ 225 (252)
T COG4604 204 DHIVALKNGKVVKQGSPDEIIQ 225 (252)
T ss_pred hheeeecCCEEEecCCHHHhcC
Confidence 9999999999999999999863
No 478
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-33 Score=321.07 Aligned_cols=212 Identities=19% Similarity=0.332 Sum_probs=164.6
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCC--CCCCceeEEEECCccCCCc-----CccceEEEEcCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDV 237 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 237 (1412)
.+.+|+|+|++|++|++++|+|||||||||||++|+|..+ |....+|+|.++|.++... ..++.++|++|++.
T Consensus 51 ~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 130 (286)
T PRK14275 51 EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDEVLLRKKIGMVFQKPN 130 (286)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccchHHhhhcEEEECCCCC
Confidence 3459999999999999999999999999999999999854 3001279999999876432 12457999999987
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
+++ .||+||+.++.+..+.... ......++.+++.+|+........
T Consensus 131 l~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~ 176 (286)
T PRK14275 131 PFP-KSIFDNIAYGPRLHGINDK---------------------------------KQLEEIVEKSLRKAALWDEVSDRL 176 (286)
T ss_pred CCc-cCHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHhCCccchhhHh
Confidence 776 4999999986533211000 001122345667777642110011
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
++.+..|||||||||+|||||+.+|++|+|||||+|||+.+...+.+.|+++.+ +.+|++++|+.+++.+++|+++
T Consensus 177 -~~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~---~~tvIivsH~~~~~~~~~d~i~ 252 (286)
T PRK14275 177 -DKNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG---SYTIMIVTHNMQQASRVSDYTM 252 (286)
T ss_pred -hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCCEEE
Confidence 234457999999999999999999999999999999999999999999998753 3677778999999999999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000576 398 LISDGQIVYQGPREHVL 414 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~ 414 (1412)
+|++|+++..|+++++.
T Consensus 253 ~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 253 FFYEGVLVEHAPTAQLF 269 (286)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988764
No 479
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=7.7e-33 Score=308.72 Aligned_cols=191 Identities=27% Similarity=0.367 Sum_probs=158.2
Q ss_pred ceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHH
Q 000576 839 RLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQETFARISGYCEQNDIHSPQVTVY 918 (1412)
Q Consensus 839 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~~yv~Q~~~~~~~lTv~ 918 (1412)
.+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+...+.+.+||+
T Consensus 34 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~---------~~~~~~~~~~~tv~ 102 (224)
T cd03220 34 EFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPP--DSGTVTVRGRVSSL---------LGLGGGFNPELTGR 102 (224)
T ss_pred CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEchh---------hcccccCCCCCcHH
Confidence 35799999999999999999999999999999999997654 47999999976421 11123345789999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCC
Q 000576 919 ESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 998 (1412)
Q Consensus 919 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD 998 (1412)
||+.+....+. ....+.++.++++++.+++.+..+..+ ..||||||||++|||+|+.+|++|+|||||+|||
T Consensus 103 enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~gLD 174 (224)
T cd03220 103 ENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAVGD 174 (224)
T ss_pred HHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 99987654321 223344456788899999987766554 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEc
Q 000576 999 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVG 1050 (1412)
Q Consensus 999 ~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G 1050 (1412)
+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 175 ~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 175 AAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999998777899999999986 57778999999985 7888765
No 480
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-33 Score=318.99 Aligned_cols=211 Identities=21% Similarity=0.305 Sum_probs=166.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCC--CCceeEEEECCccCCCc-----CccceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 238 (1412)
+++|+|+|+.|++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 38 ~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l 117 (272)
T PRK14236 38 KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNP 117 (272)
T ss_pred eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCcc
Confidence 45999999999999999999999999999999999998741 01379999999987531 124679999998877
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++. ||+||+.++....+... + ...+..++.+++.+|+.....+..
T Consensus 118 ~~~-tv~enl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 162 (272)
T PRK14236 118 FPK-SIYENVVYGLRLQGINN--R-------------------------------RVLDEAVERSLRGAALWDEVKDRL- 162 (272)
T ss_pred Ccc-cHHHHHHHHHHhcCCCc--H-------------------------------HHHHHHHHHHHHHcCCChhHHHHh-
Confidence 775 99999988654322100 0 001122445667777753211121
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
++..+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ +.+++.++|+.+++.+++|++++
T Consensus 163 ~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~---~~tiiivtH~~~~~~~~~d~i~~ 239 (272)
T PRK14236 163 HENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS---KYTIVIVTHNMQQAARVSDYTAF 239 (272)
T ss_pred hCCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh---CCeEEEEeCCHHHHHhhCCEEEE
Confidence 234557999999999999999999999999999999999999999999999853 35667789999999999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000576 399 ISDGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~G~iv~~G~~~~~~ 414 (1412)
|++|+++..|+++++.
T Consensus 240 l~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 240 MYMGKLVEYGDTDTLF 255 (272)
T ss_pred EECCEEEecCCHHHHh
Confidence 9999999999988763
No 481
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-33 Score=317.48 Aligned_cols=211 Identities=21% Similarity=0.272 Sum_probs=165.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCC--ceeEEEECCccCCCc-----CccceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLR--LYGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~--~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 238 (1412)
+++|+|+|+++++||+++|+|+||||||||+++|+|.++++.. .+|+|.++|+++... ..++.++|++|++.+
T Consensus 20 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 99 (259)
T PRK14260 20 SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNP 99 (259)
T ss_pred eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEeccccc
Confidence 4599999999999999999999999999999999999875311 379999999887431 123579999998877
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++ +||+||+.++....+...+ .+....++.+++.+|+....... -
T Consensus 100 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~-~ 144 (259)
T PRK14260 100 FP-MSIYENVAYGVRISAKLPQ---------------------------------ADLDEIVESALKGAALWQEVKDK-L 144 (259)
T ss_pred CC-ccHHHHHHHHHHHhcCCCH---------------------------------HHHHHHHHHHHHHcCCcchhhhH-h
Confidence 76 8999999886432210000 00112344566777764211111 1
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
++.+..|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++.+ +.+|+.++|+.+++.+++|++++
T Consensus 145 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~i~~~~d~i~~ 221 (259)
T PRK14260 145 NKSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS---ELTIAIVTHNMQQATRVSDFTAF 221 (259)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCeEEE
Confidence 234557999999999999999999999999999999999999999999999743 36777789999999999999999
Q ss_pred Ee-----CCeEEEecChhhHH
Q 000576 399 IS-----DGQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~-----~G~iv~~G~~~~~~ 414 (1412)
|+ +|+++++|+++++.
T Consensus 222 l~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 222 FSTDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred EeccCCCCceEEEeCCHHHHh
Confidence 98 59999999998874
No 482
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.2e-33 Score=310.63 Aligned_cols=209 Identities=22% Similarity=0.362 Sum_probs=169.0
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISP--TSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCCeEEECCEEc
Confidence 588999998873 23599999999999999999999999999999999997543 479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-hhhhcccCCCCCCCCCH
Q 000576 894 KQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELN-LLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~~lSg 969 (1412)
.. ..+++.++|++|++.+++ .|++||+.+....+.. . ..++.++++++.+++. ...+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 42 224567899999988876 4999999875433221 1 1124567899999995 344443 357999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhccEeEEecCcEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIY 1048 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y 1048 (1412)
|||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.+ .|.|||+++|+++ .+ +.+|++++|.+.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccchHh
Confidence 999999999999999999999999999999999999999999875 4899999999986 34 57999999964443343
Q ss_pred Ec
Q 000576 1049 VG 1050 (1412)
Q Consensus 1049 ~G 1050 (1412)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 33
No 483
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=5.9e-33 Score=351.78 Aligned_cols=207 Identities=21% Similarity=0.360 Sum_probs=165.3
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCCC
Q 000576 167 TILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEMT 243 (1412)
Q Consensus 167 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 243 (1412)
++|+|+|+++++|+.++|+||||||||||+++|+|.++|+ +|+|.+||.++.+... ++.++||+|++.++ +.|
T Consensus 349 ~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf-~~t 424 (585)
T TIGR01192 349 QGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPT---VGQILIDGIDINTVTRESLRKSIATVFQDAGLF-NRS 424 (585)
T ss_pred ccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCC---CCEEEECCEEhhhCCHHHHHhheEEEccCCccC-ccc
Confidence 4899999999999999999999999999999999999987 7999999998876543 46899999986655 579
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCcccc
Q 000576 244 VRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMIR 323 (1412)
Q Consensus 244 V~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 323 (1412)
++||+.++.... +.++..++.... ...+.+. .++...||.+|+.+ .
T Consensus 425 i~~Ni~~~~~~~-------------------------~~~~~~~a~~~~-----~~~~~i~---~l~~g~~t~~~~~~-~ 470 (585)
T TIGR01192 425 IRENIRLGREGA-------------------------TDEEVYEAAKAA-----AAHDFIL---KRSNGYDTLVGERG-N 470 (585)
T ss_pred HHHHHhcCCCCC-------------------------CHHHHHHHHHHh-----CcHHHHH---hccccccchhcCCC-C
Confidence 999998863210 011111111000 0111121 36667789998764 4
Q ss_pred cCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCCe
Q 000576 324 GISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDGQ 403 (1412)
Q Consensus 324 ~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G~ 403 (1412)
+||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++. .+.|++.++|+.+.+ +.+|+|++|++|+
T Consensus 471 ~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~---~~~tvI~isH~~~~~-~~~d~i~~l~~G~ 546 (585)
T TIGR01192 471 RLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALR---KNRTTFIIAHRLSTV-RNADLVLFLDQGR 546 (585)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHh---CCCEEEEEEcChHHH-HcCCEEEEEECCE
Confidence 799999999999999999999999999999999999999999998863 255666678887666 6699999999999
Q ss_pred EEEecChhhHHH
Q 000576 404 IVYQGPREHVLE 415 (1412)
Q Consensus 404 iv~~G~~~~~~~ 415 (1412)
++..|+++++.+
T Consensus 547 i~~~g~~~~l~~ 558 (585)
T TIGR01192 547 LIEKGSFQELIQ 558 (585)
T ss_pred EEEECCHHHHHH
Confidence 999999998864
No 484
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-33 Score=313.88 Aligned_cols=219 Identities=22% Similarity=0.297 Sum_probs=176.0
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCC--CC-eEEEEEEEcC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKT--TG-YVTGNITISG 890 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 890 (1412)
.++++||++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... +. +.+|+|.+||
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 478899998774 2459999999999999999999999999999999999643 11 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCC
Q 000576 891 YPKKQ-----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVN 965 (1412)
Q Consensus 891 ~~~~~-----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~ 965 (1412)
.++.. ...++.++|++|++.+++. |+.||+.+...... ....+..++.+.+.++.+++.......... ...
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLDK-SAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHhC-Ccc
Confidence 87642 1345679999999888875 99999987643221 112233345678888998885422122222 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||+|||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999864 899999999987 68888999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
+++.|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 9999885
No 485
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=313.39 Aligned_cols=219 Identities=22% Similarity=0.307 Sum_probs=175.5
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCC--Ce--EEEEEEEc
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTT--GY--VTGNITIS 889 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~~--~~G~i~i~ 889 (1412)
.+.++|++++++ ++.+|+|+|+.+++||+++|+|+||||||||+++|+|...+ |. +.|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 488999998874 24689999999999999999999999999999999997543 21 23666666
Q ss_pred CccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhh-hcccCCCCCC
Q 000576 890 GYPKKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLR-QALVGLPGVN 965 (1412)
Q Consensus 890 g~~~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-~~~vg~~~~~ 965 (1412)
|.+... ...++.++|++|++.+++.+|++||+.+...... .....+.++.++++++.+++.+.. +.... ...
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~ 152 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNS--PAS 152 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcC--Ccc
Confidence 665432 2345678999999999999999999988643321 112233445688899999986321 11111 235
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcE
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQ 1045 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~ 1045 (1412)
.||+|||||++|||+|+.+|++++|||||+|||..+...+.+.|+++.+ ++|||+++|+++ .+.+.||++++|++ |+
T Consensus 153 ~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~-g~ 229 (257)
T PRK14246 153 QLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN-GE 229 (257)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 699999999986 57788999999985 89
Q ss_pred EEEEcCC
Q 000576 1046 EIYVGPL 1052 (1412)
Q Consensus 1046 ~~y~G~~ 1052 (1412)
++..|+.
T Consensus 230 i~~~g~~ 236 (257)
T PRK14246 230 LVEWGSS 236 (257)
T ss_pred EEEECCH
Confidence 9999875
No 486
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=4.9e-33 Score=306.94 Aligned_cols=195 Identities=22% Similarity=0.306 Sum_probs=158.1
Q ss_pred ccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC-------ccceEEEE
Q 000576 160 SSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV-------PQRTAAYI 232 (1412)
Q Consensus 160 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv 232 (1412)
..+++++++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|+
T Consensus 5 ~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~ 81 (206)
T TIGR03608 5 SKKFGDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFD---SGQVYLNGKETPPLNSKKASKFRREKLGYL 81 (206)
T ss_pred EEEECCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccchhhHHHHHHhCeeEE
Confidence 34445567999999999999999999999999999999999999886 799999999854221 13579999
Q ss_pred cCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcc
Q 000576 233 SQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVC 312 (1412)
Q Consensus 233 ~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~ 312 (1412)
+|++.+++.+||+||+.++....+... .+....++.+++.+||++.
T Consensus 82 ~q~~~~~~~~t~~e~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~ 127 (206)
T TIGR03608 82 FQNFALIENETVEENLDLGLKYKKLSK----------------------------------KEKREKKKEALEKVGLNLK 127 (206)
T ss_pred ecchhhccCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCchhh
Confidence 999888888999999998643221100 0111235668899999876
Q ss_pred ccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000576 313 ADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDL 392 (1412)
Q Consensus 313 ~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~ 392 (1412)
.|+.+ +.||||||||++||+||+.+|++|+|||||+|||+.+...+.+.|+++.. .+.+++.++|+... .+.
T Consensus 128 ~~~~~-----~~lS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~sh~~~~-~~~ 199 (206)
T TIGR03608 128 LKQKI-----YELSGGEQQRVALARAILKDPPLILADEPTGSLDPKNRDEVLDLLLELND--EGKTIIIVTHDPEV-AKQ 199 (206)
T ss_pred hcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHH-Hhh
Confidence 66554 46999999999999999999999999999999999999999999999864 25666667888765 478
Q ss_pred cCeEEEE
Q 000576 393 FDDIILI 399 (1412)
Q Consensus 393 ~D~vivL 399 (1412)
+|++++|
T Consensus 200 ~d~i~~l 206 (206)
T TIGR03608 200 ADRVIEL 206 (206)
T ss_pred cCEEEeC
Confidence 9999875
No 487
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.9e-33 Score=311.97 Aligned_cols=210 Identities=26% Similarity=0.398 Sum_probs=169.1
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++. ..+.+|+|+|+++++|++++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 68 (220)
T cd03245 2 RIEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKP--TSGSVLLDGTDI 68 (220)
T ss_pred eEEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCeEEECCEEh
Confidence 3678999987731 124599999999999999999999999999999999997543 479999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccC------CCCC
Q 000576 894 KQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVG------LPGV 964 (1412)
Q Consensus 894 ~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg------~~~~ 964 (1412)
.. ...++.++|++|++.+++ .||.|++.+... ... ++.++++++.+++.+..+.... ....
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 138 (220)
T cd03245 69 RQLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERG 138 (220)
T ss_pred HHCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCC
Confidence 32 223567899999988776 699999875321 111 2235678888888876665431 1123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCc
Q 000576 965 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGG 1044 (1412)
Q Consensus 965 ~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG 1044 (1412)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ +|||+++|++. . .+.+|++++|++ |
T Consensus 139 ~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~-~~~~d~v~~l~~-g 214 (220)
T cd03245 139 RGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS-L-LDLVDRIIVMDS-G 214 (220)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH-H-HHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999998764 89999999986 3 479999999986 7
Q ss_pred EEEEEc
Q 000576 1045 QEIYVG 1050 (1412)
Q Consensus 1045 ~~~y~G 1050 (1412)
++++.|
T Consensus 215 ~i~~~~ 220 (220)
T cd03245 215 RIVADG 220 (220)
T ss_pred eEeecC
Confidence 887654
No 488
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-33 Score=346.11 Aligned_cols=217 Identities=28% Similarity=0.359 Sum_probs=180.2
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccC
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPK 893 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 893 (1412)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQP--DAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEC
Confidence 488999998874 23599999999999999999999999999999999997654 479999999876
Q ss_pred Cc----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCH
Q 000576 894 KQ----ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLST 969 (1412)
Q Consensus 894 ~~----~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSg 969 (1412)
.. ..+++.++|++|++.+++.+||+||+.+....+........+.++.++++++.+++.+..+..+ ..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCH
Confidence 42 1234678999999989999999999987532111111223344556889999999976555443 47999
Q ss_pred HHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEE
Q 000576 970 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYV 1049 (1412)
Q Consensus 970 GqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~ 1049 (1412)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.||++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999987 57788999999985 788877
Q ss_pred cCC
Q 000576 1050 GPL 1052 (1412)
Q Consensus 1050 G~~ 1052 (1412)
++.
T Consensus 222 ~~~ 224 (501)
T PRK11288 222 FDD 224 (501)
T ss_pred cCc
Confidence 654
No 489
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=313.81 Aligned_cols=212 Identities=21% Similarity=0.311 Sum_probs=163.7
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCC--CCCCceeEEEECCccCCCc-----CccceEEEEcCCCC
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDV 237 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 237 (1412)
.+++|+|+|+++++||+++|+|||||||||||++|+|..+ |+...+|+|.++|.++... ..++.++|++|++.
T Consensus 17 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (252)
T PRK14255 17 KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPN 96 (252)
T ss_pred CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCc
Confidence 3469999999999999999999999999999999999865 3211379999999877421 12357999999987
Q ss_pred cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccc
Q 000576 238 HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 317 (1412)
Q Consensus 238 ~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 317 (1412)
.++ .||+||+.+.....+.... + .........++.+|+........
T Consensus 97 ~~~-~tv~~nl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~i~~~~ 142 (252)
T PRK14255 97 PFP-FSIYENVIYGLRLAGVKDK-A--------------------------------VLDEAVETSLKQAAIWDEVKDHL 142 (252)
T ss_pred cCC-CcHHHHHHHHHHHcCCCCH-H--------------------------------HHHHHHHHHHHHcCCccchhhHH
Confidence 777 7999999986543221000 0 00011233455555532111111
Q ss_pred cCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000576 318 GDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDII 397 (1412)
Q Consensus 318 g~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vi 397 (1412)
+..+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ + .+++.++|+..++.+++|+|+
T Consensus 143 -~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~ 218 (252)
T PRK14255 143 -HESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQASRISDKTA 218 (252)
T ss_pred -hcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHHHhCCEEE
Confidence 233457999999999999999999999999999999999999999999999854 3 567778999999999999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000576 398 LISDGQIVYQGPREHVL 414 (1412)
Q Consensus 398 vL~~G~iv~~G~~~~~~ 414 (1412)
+|++|+++..|+..++.
T Consensus 219 ~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 219 FFLTGNLIEFADTKQMF 235 (252)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999888763
No 490
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=313.90 Aligned_cols=221 Identities=19% Similarity=0.306 Sum_probs=171.7
Q ss_pred hhcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCC---CceeEEEECCccCCCcC---ccceEE
Q 000576 157 NILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL---RLYGRVTYNGHNMDEFV---PQRTAA 230 (1412)
Q Consensus 157 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~---~~~G~V~~~G~~~~~~~---~~~~~~ 230 (1412)
+++.++++++.+|+|+|+++++||+++|+||||||||||+++|+|.++|+. .+.|+|.++|+++.... .++.++
T Consensus 14 ~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~~~~~i~ 93 (257)
T PRK14246 14 SRLYLYINDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIKLRKEVG 93 (257)
T ss_pred eeEEEecCCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHHHhcceE
Confidence 344555666789999999999999999999999999999999999998762 12355555566554322 246799
Q ss_pred EEcCCCCcCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC
Q 000576 231 YISQHDVHIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD 310 (1412)
Q Consensus 231 yv~Q~d~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~ 310 (1412)
|++|++.+++.+||+||+.++....+.... .+....++++++.+|+.
T Consensus 94 ~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~l~ 140 (257)
T PRK14246 94 MVFQQPNPFPHLSIYDNIAYPLKSHGIKEK---------------------------------REIKKIVEECLRKVGLW 140 (257)
T ss_pred EEccCCccCCCCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCC
Confidence 999998888899999999986432111000 01112345678888886
Q ss_pred ccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 000576 311 VCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAY 390 (1412)
Q Consensus 311 ~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~ 390 (1412)
+...... ++.+..||||||||++||||++.+|++++|||||+|||..+...+.+.|+++.+ +.+|+.++|+...+.
T Consensus 141 ~~~~~~~-~~~~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tiilvsh~~~~~~ 216 (257)
T PRK14246 141 KEVYDRL-NSPASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN---EIAIVIVSHNPQQVA 216 (257)
T ss_pred ccchhhh-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CcEEEEEECCHHHHH
Confidence 3211111 234457999999999999999999999999999999999999999999998743 367777899999999
Q ss_pred hhcCeEEEEeCCeEEEecChhhHH
Q 000576 391 DLFDDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 391 ~~~D~vivL~~G~iv~~G~~~~~~ 414 (1412)
+++|++++|++|+++..|+.+++.
T Consensus 217 ~~~d~v~~l~~g~i~~~g~~~~~~ 240 (257)
T PRK14246 217 RVADYVAFLYNGELVEWGSSNEIF 240 (257)
T ss_pred HhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999988764
No 491
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.6e-33 Score=350.79 Aligned_cols=208 Identities=26% Similarity=0.386 Sum_probs=165.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc---cceEEEEcCCCCcCCCC
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP---QRTAAYISQHDVHIGEM 242 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 242 (1412)
.++|+|+|++++||+.++|+||||||||||+++|+|+++|+ +|+|.+||+++.+... ++.++||+|++.++ +.
T Consensus 328 ~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf-~~ 403 (569)
T PRK10789 328 HPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVS---EGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLF-SD 403 (569)
T ss_pred CccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCEEEECCEEHhhCCHHHHHhheEEEccCCeec-cc
Confidence 45899999999999999999999999999999999999997 7999999998876543 46799999986655 56
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000576 243 TVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMI 322 (1412)
Q Consensus 243 TV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 322 (1412)
|++|||.++... .+.+...++....+ ..+. ...++++.||.+|+.+.
T Consensus 404 ti~~Ni~~~~~~-------------------------~~~~~~~~~~~~~~-----l~~~---i~~lp~gl~t~~~~~g~ 450 (569)
T PRK10789 404 TVANNIALGRPD-------------------------ATQQEIEHVARLAS-----VHDD---ILRLPQGYDTEVGERGV 450 (569)
T ss_pred cHHHHHhcCCCC-------------------------CCHHHHHHHHHHcC-----CHHH---HHhCcCcccceecCCCC
Confidence 999999886311 00011111110000 0111 23477888999998654
Q ss_pred ccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEEeCC
Q 000576 323 RGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIILISDG 402 (1412)
Q Consensus 323 ~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~vivL~~G 402 (1412)
.||||||||++||||++.+|++++|||||++||+.++..+.+.|+++. ++.|++.++|+.+. .+.+|+|++|++|
T Consensus 451 -~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~---~~~tii~itH~~~~-~~~~d~i~~l~~G 525 (569)
T PRK10789 451 -MLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG---EGRTVIISAHRLSA-LTEASEILVMQHG 525 (569)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh---CCCEEEEEecchhH-HHcCCEEEEEeCC
Confidence 699999999999999999999999999999999999999999999863 34556657777654 5679999999999
Q ss_pred eEEEecChhhHHH
Q 000576 403 QIVYQGPREHVLE 415 (1412)
Q Consensus 403 ~iv~~G~~~~~~~ 415 (1412)
+++.+|+++++.+
T Consensus 526 ~i~~~g~~~~l~~ 538 (569)
T PRK10789 526 HIAQRGNHDQLAQ 538 (569)
T ss_pred EEEEecCHHHHHH
Confidence 9999999998864
No 492
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1.1e-32 Score=314.00 Aligned_cols=215 Identities=25% Similarity=0.282 Sum_probs=173.1
Q ss_pred eEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc-
Q 000576 814 SLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP- 892 (1412)
Q Consensus 814 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~- 892 (1412)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAP--DHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEEecccc
Confidence 478999998874 13589999999999999999999999999999999997654 47999999976
Q ss_pred ----CCcc-------cccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCch-hhhcc
Q 000576 893 ----KKQE-------TFARISGYCEQNDI--HSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNL-LRQAL 958 (1412)
Q Consensus 893 ----~~~~-------~~~~~~~yv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~ 958 (1412)
+... ..++.++|++|++. ..+.+|+.|++.+..... .. ....+..+.++++++.+++.+ ..+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 3221 12346899999874 456689999986542211 11 111233456788999999963 44443
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhccE
Q 000576 959 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1037 (1412)
Q Consensus 959 vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp~~~i~~~fD~v 1037 (1412)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|++. .+.+.+|++
T Consensus 146 -----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 -----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred -----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998654 899999999986 577789999
Q ss_pred eEEecCcEEEEEcCC
Q 000576 1038 FLLKRGGQEIYVGPL 1052 (1412)
Q Consensus 1038 ~ll~~gG~~~y~G~~ 1052 (1412)
++|++ |++++.|+.
T Consensus 220 ~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 220 LVMQQ-GRVVESGLT 233 (253)
T ss_pred EEEEC-CEEEEECCH
Confidence 99985 899999875
No 493
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=8.1e-33 Score=348.71 Aligned_cols=213 Identities=28% Similarity=0.423 Sum_probs=173.9
Q ss_pred ceEEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCcc
Q 000576 813 HSLTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYP 892 (1412)
Q Consensus 813 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 892 (1412)
..++++|++++|+. +++.+|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 315 ~~i~~~~v~~~y~~-----------~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~--~~G~i~~~g~~ 381 (544)
T TIGR01842 315 GHLSVENVTIVPPG-----------GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPP--TSGSVRLDGAD 381 (544)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEe
Confidence 36999999999852 124689999999999999999999999999999999997654 47999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchh-------hhcccCCC
Q 000576 893 KKQ---ETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLL-------RQALVGLP 962 (1412)
Q Consensus 893 ~~~---~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~vg~~ 962 (1412)
+.. ..+++.++||+|++.+++. |++||+.+.. .+.+++ .++++++..++.+. .|+.+|..
T Consensus 382 i~~~~~~~~~~~i~~v~q~~~lf~~-ti~~Ni~~~~-----~~~~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~ 451 (544)
T TIGR01842 382 LKQWDRETFGKHIGYLPQDVELFPG-TVAENIARFG-----ENADPE----KIIEAAKLAGVHELILRLPDGYDTVIGPG 451 (544)
T ss_pred hhhCCHHHHhhheEEecCCcccccc-cHHHHHhccC-----CCCCHH----HHHHHHHHhChHHHHHhCccccccccCCC
Confidence 653 3466789999999988875 9999997432 122222 24445555554432 24445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEec
Q 000576 963 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKR 1042 (1412)
Q Consensus 963 ~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~ 1042 (1412)
..+||||||||++|||||+++|++|+|||||||||+.++..+++.|+++..+|+|+|+++|+++ ..+.+|++++|++
T Consensus 452 -g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~--~~~~~d~i~~l~~ 528 (544)
T TIGR01842 452 -GATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPS--LLGCVDKILVLQD 528 (544)
T ss_pred -cCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999998766899999999986 4678999999985
Q ss_pred CcEEEEEcCC
Q 000576 1043 GGQEIYVGPL 1052 (1412)
Q Consensus 1043 gG~~~y~G~~ 1052 (1412)
|++++.|+.
T Consensus 529 -G~i~~~g~~ 537 (544)
T TIGR01842 529 -GRIARFGER 537 (544)
T ss_pred -CEEEeeCCH
Confidence 899999974
No 494
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=315.27 Aligned_cols=213 Identities=23% Similarity=0.312 Sum_probs=169.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCC--CCceeEEEECCccCCCc-----CccceEEEEcCCCCc
Q 000576 166 ITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRLYGRVTYNGHNMDEF-----VPQRTAAYISQHDVH 238 (1412)
Q Consensus 166 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 238 (1412)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|+++... ..++.++|++|+..+
T Consensus 20 ~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~l 99 (261)
T PRK14258 20 QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVSMVHPKPNL 99 (261)
T ss_pred eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEEEEecCCcc
Confidence 35899999999999999999999999999999999999874 12479999999886421 123569999998777
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000576 239 IGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 318 (1412)
Q Consensus 239 ~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 318 (1412)
++ +||+||+.++....+.... .+....+..+++.+|+.+..+...
T Consensus 100 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 144 (261)
T PRK14258 100 FP-MSVYDNVAYGVKIVGWRPK---------------------------------LEIDDIVESALKDADLWDEIKHKI- 144 (261)
T ss_pred Cc-ccHHHHHHHHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCcchhhhHh-
Confidence 76 8999999886432110000 001123456777888754222111
Q ss_pred CcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000576 319 DEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFDDIIL 398 (1412)
Q Consensus 319 ~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D~viv 398 (1412)
++.+..||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|++++.. .+++|+.++|+..++.+++|+|++
T Consensus 145 ~~~~~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~-~~~tiiivsH~~~~i~~~~d~i~~ 223 (261)
T PRK14258 145 HKSALDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLR-SELTMVIVSHNLHQVSRLSDFTAF 223 (261)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-CCCEEEEEECCHHHHHHhcCEEEE
Confidence 2445579999999999999999999999999999999999999999999997643 356777789999999999999999
Q ss_pred EeC-----CeEEEecChhhHH
Q 000576 399 ISD-----GQIVYQGPREHVL 414 (1412)
Q Consensus 399 L~~-----G~iv~~G~~~~~~ 414 (1412)
|++ |+++++|+++++.
T Consensus 224 l~~~~~~~G~i~~~~~~~~~~ 244 (261)
T PRK14258 224 FKGNENRIGQLVEFGLTKKIF 244 (261)
T ss_pred EccCCCcCceEEEeCCHHHHH
Confidence 999 9999999999874
No 495
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.3e-32 Score=312.68 Aligned_cols=219 Identities=26% Similarity=0.301 Sum_probs=170.5
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ ++.+|+|+|+.|++||+++|+|+||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 67899998874 23599999999999999999999999999999999997321135799999998754
Q ss_pred cc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHH-hcCC--CC-CCHHHHHHHHHHHHHHcCCc-hhhhcccCCCCCC
Q 000576 895 QE---T-FARISGYCEQNDIHSPQVTVYESLLYSAW-LRLS--PE-VDSKTRKMFIEEVMELVELN-LLRQALVGLPGVN 965 (1412)
Q Consensus 895 ~~---~-~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~-lr~~--~~-~~~~~~~~~v~~~l~~l~l~-~~~~~~vg~~~~~ 965 (1412)
.. . .++.++|++|++.+++.+|+.+++.+... ++.. .+ ....+....+++.++.+++. +..+..+ .+
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 21 1 22468999999888888887776543211 1110 00 11122345677888888884 3333322 13
Q ss_pred CCCHHHHHHHHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-hccEeEEecCc
Q 000576 966 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLLKRGG 1044 (1412)
Q Consensus 966 ~lSgGqrqRl~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~-fD~v~ll~~gG 1044 (1412)
.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++.|+|||+++|++. .+... +|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999999877899999999986 34454 799999985 8
Q ss_pred EEEEEcCC
Q 000576 1045 QEIYVGPL 1052 (1412)
Q Consensus 1045 ~~~y~G~~ 1052 (1412)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 99999975
No 496
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=8.7e-33 Score=316.68 Aligned_cols=207 Identities=25% Similarity=0.335 Sum_probs=170.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcCc------cceEEEEcCCC--
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFVP------QRTAAYISQHD-- 236 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d-- 236 (1412)
++.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++....+ ++.++|++|++
T Consensus 24 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~ 100 (268)
T PRK10419 24 HQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSIS 100 (268)
T ss_pred ceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhh
Confidence 356999999999999999999999999999999999999886 8999999998754322 35799999986
Q ss_pred CcCCCCCHHHHHHHhhhhc-CCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC-cccc
Q 000576 237 VHIGEMTVRETLAFSARCQ-GVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD-VCAD 314 (1412)
Q Consensus 237 ~~~~~lTV~e~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~d 314 (1412)
.+.+..|++|++.+..... .. + ..+....++.+++.+|++ ...+
T Consensus 101 ~~~~~~t~~~~l~~~~~~~~~~-----------------------~-----------~~~~~~~~~~~l~~~gl~~~~~~ 146 (268)
T PRK10419 101 AVNPRKTVREIIREPLRHLLSL-----------------------D-----------KAERLARASEMLRAVDLDDSVLD 146 (268)
T ss_pred ccCCCCCHHHHHHHHHHhhccC-----------------------C-----------HHHHHHHHHHHHHHcCCChhHhh
Confidence 3567799999997643210 00 0 001122356788889996 3444
Q ss_pred ccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000576 315 TMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEAYDLFD 394 (1412)
Q Consensus 315 t~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~~~~~D 394 (1412)
+. .+.||||||||++||+||+.+|++|+|||||+|||+.+...+.+.|+++++. .+++++.++|+..++.+++|
T Consensus 147 ~~-----~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tiiivsH~~~~i~~~~d 220 (268)
T PRK10419 147 KR-----PPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQ-FGTACLFITHDLRLVERFCQ 220 (268)
T ss_pred CC-----CccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHH-cCcEEEEEECCHHHHHHhCC
Confidence 43 4479999999999999999999999999999999999999999999998653 35677778999999999999
Q ss_pred eEEEEeCCeEEEecChhhHH
Q 000576 395 DIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 395 ~vivL~~G~iv~~G~~~~~~ 414 (1412)
++++|++|++++.|+.+++.
T Consensus 221 ~i~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 221 RVMVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEEEECCEEeeeCChhhcc
Confidence 99999999999999988764
No 497
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1e-32 Score=314.29 Aligned_cols=208 Identities=24% Similarity=0.330 Sum_probs=166.5
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCcc-----CCCcCc-------cceEEEE
Q 000576 165 HITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHN-----MDEFVP-------QRTAAYI 232 (1412)
Q Consensus 165 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv 232 (1412)
.+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.+ +..... ++.++|+
T Consensus 15 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~ 91 (253)
T TIGR02323 15 GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPD---HGTATYIMRSGAELELYQLSEAERRRLMRTEWGFV 91 (253)
T ss_pred CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEEecccccccccccCCHHHHHHhhhcceEEE
Confidence 345899999999999999999999999999999999999886 7999999976 443221 2458999
Q ss_pred cCCCC--cCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHHHHHHHHhCCC
Q 000576 233 SQHDV--HIGEMTVRETLAFSARCQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVTDYILKILGLD 310 (1412)
Q Consensus 233 ~Q~d~--~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~ 310 (1412)
+|++. ..+.+|+.||+.+....... ..+ .+....++.+++.+|+.
T Consensus 92 ~q~~~~~~~~~~~~~~~i~~~~~~~~~-~~~--------------------------------~~~~~~~~~~l~~l~l~ 138 (253)
T TIGR02323 92 HQNPRDGLRMRVSAGANIGERLMAIGA-RHY--------------------------------GNIRAAAHDWLEEVEID 138 (253)
T ss_pred EeCcccccCccccHHHHHHHHHHHhcc-cch--------------------------------HHHHHHHHHHHHHcCCC
Confidence 99863 34567999999754211000 000 00112345688999996
Q ss_pred c-cccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 000576 311 V-CADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLISLLQPAPEA 389 (1412)
Q Consensus 311 ~-~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~~~~~~~ 389 (1412)
+ ..++. ++.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|++++.. .+.++++++|+.+++
T Consensus 139 ~~~~~~~-----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~vsH~~~~~ 212 (253)
T TIGR02323 139 PTRIDDL-----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRD-LGLAVIIVTHDLGVA 212 (253)
T ss_pred hhhhhcC-----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHH
Confidence 3 44444 4479999999999999999999999999999999999999999999987653 356777789999999
Q ss_pred HhhcCeEEEEeCCeEEEecChhhHH
Q 000576 390 YDLFDDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 390 ~~~~D~vivL~~G~iv~~G~~~~~~ 414 (1412)
.+++|++++|++|++++.|+.+++.
T Consensus 213 ~~~~d~~~~l~~G~i~~~~~~~~~~ 237 (253)
T TIGR02323 213 RLLAQRLLVMQQGRVVESGLTDQVL 237 (253)
T ss_pred HHhcCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999988764
No 498
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=8.1e-33 Score=305.02 Aligned_cols=197 Identities=28% Similarity=0.364 Sum_probs=164.7
Q ss_pred EEEeceeeeeecchhhhhccccCCceeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCC
Q 000576 815 LTFDDVTYSVDMPQEMKLRGVLDDRLVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKK 894 (1412)
Q Consensus 815 l~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 894 (1412)
++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPP--AAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEeCc
Confidence 68899998773 24699999999999999999999999999999999997553 4799999998753
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHH
Q 000576 895 QETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKR 974 (1412)
Q Consensus 895 ~~~~~~~~~yv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqR 974 (1412)
....++.++|++|++.+++.+||+|++.+....+. .. ++.++++++.+++.+..+... ..||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22255678999999888889999999987553321 11 234788999999987655443 4799999999
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEe
Q 000576 975 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLK 1041 (1412)
Q Consensus 975 l~ia~~L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~ 1041 (1412)
++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++.+ |+++.+.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~--~~~~~~~ 199 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLPG--ARELDLG 199 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhcc--CcEEeec
Confidence 99999999999999999999999999999999999998777999999999986 3443 8887774
No 499
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-33 Score=281.46 Aligned_cols=213 Identities=26% Similarity=0.342 Sum_probs=179.8
Q ss_pred hcccccccceeeeceeeEEeCCeEEEEEcCCCCCHHHHHHHHhcCCCCCCCceeEEEECCccCCCcC-------c-----
Q 000576 158 ILSSRKKHITILKGVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRLYGRVTYNGHNMDEFV-------P----- 225 (1412)
Q Consensus 158 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~----- 225 (1412)
++.++++...+|++||+..+.|+.+.|+|.+||||||+|+||.=+..|+ .|.|.+||+.+.-.. +
T Consensus 11 dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~---~G~I~v~geei~~k~~~~G~l~~ad~~q 87 (256)
T COG4598 11 DLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---AGSIRVNGEEIRLKRDKDGQLKPADKRQ 87 (256)
T ss_pred HHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCC---CceEEECCeEEEeeeCCCCCeeeCCHHH
Confidence 4567889999999999999999999999999999999999999988887 799999998763211 1
Q ss_pred ----cceEEEEcCCCCcCCCCCHHHHHHHhhh-hcCCCchhhHhHHHHHHHHHcCCCCCCChHHHHHHHHhhhhhhhHHH
Q 000576 226 ----QRTAAYISQHDVHIGEMTVRETLAFSAR-CQGVGSRYEMLTELARREKAAGIKPDPDLDVFMKAAATEGQEASVVT 300 (1412)
Q Consensus 226 ----~~~~~yv~Q~d~~~~~lTV~e~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1412)
+.+.++|+|+..+...|||.||+.-+.. .-+. ...++....
T Consensus 88 ~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~----------------------------------~k~ea~e~A 133 (256)
T COG4598 88 LQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGV----------------------------------SKAEAIERA 133 (256)
T ss_pred HHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcC----------------------------------CHHHHHHHH
Confidence 1247999999999999999999875421 1110 111233445
Q ss_pred HHHHHHhCCCccccccccCcccccCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEE
Q 000576 301 DYILKILGLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAQAFFMDEISTGLDSSTTFQIVNSLRQFIHILRGTTLI 380 (1412)
Q Consensus 301 ~~il~~lgL~~~~dt~vg~~~~~~LSGGqkqRvsiA~aL~~~p~vllLDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii 380 (1412)
+..|..+||.+..|.+ +..|||||+||++|||||+.+|+++++|||||+|||.-.-++++.+++++.. +.|.+
T Consensus 134 e~~L~kVGi~ek~~~Y-----P~~LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeE--grTMv 206 (256)
T COG4598 134 EKYLAKVGIAEKADAY-----PAHLSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEE--GRTMV 206 (256)
T ss_pred HHHHHHhCchhhhhcC-----ccccCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHh--CCeEE
Confidence 6789999999887754 4469999999999999999999999999999999999999999999999873 55666
Q ss_pred EEecChhhHHhhcCeEEEEeCCeEEEecChhhHH
Q 000576 381 SLLQPAPEAYDLFDDIILISDGQIVYQGPREHVL 414 (1412)
Q Consensus 381 ~i~~~~~~~~~~~D~vivL~~G~iv~~G~~~~~~ 414 (1412)
.++|.+..+-+...+|+.|.+|.|-++||++++.
T Consensus 207 ~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P~qvf 240 (256)
T COG4598 207 VVTHEMGFARDVSSHVIFLHQGKIEEEGPPEQVF 240 (256)
T ss_pred EEeeehhHHHhhhhheEEeecceecccCChHHHh
Confidence 6899999999999999999999999999999983
No 500
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-33 Score=345.37 Aligned_cols=206 Identities=27% Similarity=0.352 Sum_probs=172.3
Q ss_pred eeeecceEEEEeCCeEEEEEcCCCCChhhHHhhhcCCCCCCeEEEEEEEcCccCCc----ccccceEEEeccCCCCCCCC
Q 000576 840 LVLLNSVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTTGYVTGNITISGYPKKQ----ETFARISGYCEQNDIHSPQV 915 (1412)
Q Consensus 840 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~~yv~Q~~~~~~~l 915 (1412)
+.+|+|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.. ...++.++|++|+..+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 4699999999999999999999999999999999997654 47999999987642 12345689999998888999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCchhhhcccCCCCCCCCCHHHHHHHHHHHHHhhCCcEEEEeCCCC
Q 000576 916 TVYESLLYSAWLRLSPEVDSKTRKMFIEEVMELVELNLLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 995 (1412)
Q Consensus 916 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~vg~~~~~~lSgGqrqRl~ia~~L~~~p~illlDEPTs 995 (1412)
||+|++.+.............+..+.++++++.+++.+..+..+ ..|||||||||+||++|+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 99999987532111111123333456889999999986665543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhccEeEEecCcEEEEEcCCCC
Q 000576 996 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQEIYVGPLGR 1054 (1412)
Q Consensus 996 gLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp~~~i~~~fD~v~ll~~gG~~~y~G~~~~ 1054 (1412)
|||+.+...+.+.|+++++.|+|||+++|+++ ++.+.||++++|++ |+++..|+...
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 99999999999999999878999999999986 57788999999985 89999998743
Done!