Your job contains 1 sequence.
>000580
MSSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEV
VDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGE
EQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPE
YTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWYKRCRKVCHTAGVGNVISR
WIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFN
QRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMYLSTSASSG
NSGTVGGVGGFNNHHFRPSCLKVVTTRPSPPLGVGGGLGFGAISLAGRNQSDDISLKVET
AYYSAGTLVLSDASPPTMSSLIIVSKDPSSQSYPTGSLGTSARISRALRESVTSLPVEGR
MLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRI
VVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSE
NLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQEAEPVFSGAYE
GLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLENKIRSLEKFLRCIRN
QRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFGSYSRNADSNGAGTSNKRQRL
PYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLISALME
YYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAVTSDSEEKENLAREAF
NFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDAFNDQIDAATREYALV
QRQQCYEIITSALRSLKGDSSQREFGSPVRPAGPRSALDPASRKKYICQIVQLGVQSPDR
IFHEYLYRTMIDLGLENELLEYGGPDLVPFLQSAGREPIQEVRAVSGITSAASLMGQTGT
PIPSNEAKYFDLLARYYVLKRQHLLAAHVLLRLAERRSTDEKDAPTLDQRRQYLSNAILQ
AKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELEAIASSLETSVDMSEST
QNGSAPDSSSTTDANYAKIVREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANY
TGDADSSIIRETWARLIDQALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEKA
ALERLDSQVESVGDEDIARALLAACKGAAEPVLNTYDQXXXXXXXXYPVELFCRHQTSGY
AFFDQCSWYLESGQCLYLQKEWVQALQEHL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000580
(1410 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2006802 - symbol:NUP155 "nucleoporin 155" spec... 4821 0. 1
UNIPROTKB|F1NNT9 - symbol:NUP155 "Uncharacterized protein... 465 1.0e-83 5
UNIPROTKB|F1NPS0 - symbol:NUP155 "Uncharacterized protein... 465 1.4e-83 5
UNIPROTKB|O75694 - symbol:NUP155 "Nuclear pore complex pr... 437 2.5e-79 5
UNIPROTKB|F1MNT1 - symbol:NUP155 "Uncharacterized protein... 450 6.6e-79 5
MGI|MGI:2181182 - symbol:Nup155 "nucleoporin 155" species... 437 1.1e-77 5
UNIPROTKB|F6XTD9 - symbol:NUP155 "Uncharacterized protein... 440 2.2e-77 5
UNIPROTKB|D4A0V4 - symbol:Nup155 "Nuclear pore complex pr... 435 3.9e-77 5
UNIPROTKB|F1SN95 - symbol:NUP155 "Uncharacterized protein... 428 1.3e-76 5
RGD|621199 - symbol:Nup155 "nucleoporin 155" species:1011... 421 6.9e-76 5
UNIPROTKB|P37199 - symbol:Nup155 "Nuclear pore complex pr... 421 6.9e-76 5
UNIPROTKB|E9PF10 - symbol:NUP155 "Nuclear pore complex pr... 437 5.0e-71 6
ZFIN|ZDB-GENE-040426-711 - symbol:nup155 "nucleoporin 155... 455 1.4e-68 4
FB|FBgn0021761 - symbol:Nup154 "Nucleoporin 154kD" specie... 401 5.6e-56 6
ASPGD|ASPL0000004413 - symbol:nup170 species:162425 "Emer... 326 3.0e-44 4
POMBASE|SPAC890.06 - symbol:nup155 "nucleoporin Nup155" s... 317 2.1e-43 5
UNIPROTKB|E2QVP9 - symbol:NUP155 "Uncharacterized protein... 432 5.1e-41 3
UNIPROTKB|G0ZGU4 - symbol:NUP170 "Nup170p" species:285224... 314 1.5e-40 4
DICTYBASE|DDB_G0291163 - symbol:nup155 "nucleoporin 155" ... 261 8.5e-39 5
WB|WBGene00003794 - symbol:npp-8 species:6239 "Caenorhabd... 245 4.0e-27 3
SGD|S000000175 - symbol:NUP170 "Subunit of the inner ring... 251 5.7e-21 4
CGD|CAL0001635 - symbol:orf19.2485 species:5476 "Candida ... 214 5.8e-16 3
SGD|S000000907 - symbol:NUP157 "Subunit of the inner ring... 137 3.5e-09 3
>TAIR|locus:2006802 [details] [associations]
symbol:NUP155 "nucleoporin 155" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0005643 "nuclear
pore" evidence=IEA;ISS] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA;ISS] [GO:0017056 "structural constituent of nuclear
pore" evidence=IEA] [GO:0005487 "nucleocytoplasmic transporter
activity" evidence=ISS] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0001510 "RNA
methylation" evidence=RCA] InterPro:IPR004870 EMBL:CP002684
GO:GO:0005886 GO:GO:0009506 GO:GO:0009507 GO:GO:0005730
GO:GO:0005643 GO:GO:0017056 KO:K14312 InterPro:IPR007187
InterPro:IPR014908 PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801
GO:GO:0005487 IPI:IPI00538745 RefSeq:NP_172938.2 UniGene:At.41950
PRIDE:F4HXV6 EnsemblPlants:AT1G14850.1 GeneID:838050
KEGG:ath:AT1G14850 OMA:AIVNRNI ArrayExpress:F4HXV6 Uniprot:F4HXV6
Length = 1464
Score = 4821 (1702.1 bits), Expect = 0., P = 0.
Identities = 956/1381 (69%), Positives = 1100/1381 (79%)
Query: 1 MSSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEV 60
MS ++EI+MRDVT+AG+ + DRIGRE ASQLD+EEALEASRYASHPY+THPREWPPL+EV
Sbjct: 1 MSQDDEIVMRDVTSAGICIGDRIGREAASQLDLEEALEASRYASHPYSTHPREWPPLIEV 60
Query: 61 VDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGE 120
+TW+LP+VL+ERYN AGGEG ALCGIFPEIRRAWASVDNSLFLWRFDK DGQCPEY+GE
Sbjct: 61 GETWELPSVLIERYNTAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKRDGQCPEYSGE 120
Query: 121 EQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPE 180
EQ ICAVGLAK +PG+FVEAIQYLL+LATPVEL+LVGVCC+ DG DPYAEIS+QPLP+
Sbjct: 121 EQAICAVGLAKCRPGVFVEAIQYLLVLATPVELVLVGVCCTEGPDGRDPYAEISVQPLPD 180
Query: 181 YTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWYKRCRKVCHTAGVGNVISR 240
YT+ SDGVTMTC+TCT+KGRI +AGRDG+IYELLYTTGSGW KRCRKVC TAGVG++ISR
Sbjct: 181 YTISSDGVTMTCVTCTNKGRIFMAGRDGHIYELLYTTGSGWNKRCRKVCLTAGVGSMISR 240
Query: 241 WIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFN 300
W+VPNVF+FGAVDP+VE+V DNERQ+LYARTEEMKLQ +V GPNG+GPLKKVAEERNL N
Sbjct: 241 WVVPNVFKFGAVDPVVEMVVDNERQILYARTEEMKLQAYVSGPNGEGPLKKVAEERNLLN 300
Query: 301 QRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMYLXXXXXXX 360
Q+D G RQ+ RS KPS+VSISPLS LESKWLHLVA LSDGRRMYL
Sbjct: 301 QKDLSQGNRQSA---VAGRSNKPSIVSISPLSMLESKWLHLVAALSDGRRMYLSTSSSGS 357
Query: 361 XXXXXXXXXXFNNHHFRPSCLKVVTTRXXXXXXXXXXXXXXXXXXXXRNQSDDISLKVET 420
FNNH P+CLKVV+TR R Q+DD+S+K+ET
Sbjct: 358 GSTISFSG--FNNHRQTPNCLKVVSTRPSPPLGVGVGLGFGAASVAGRTQNDDLSMKIET 415
Query: 421 AYYSAGTLVLSDASPPTMSSLIIVSKDPSSQSYPTGSLGTSARISRALRESVTSLPVEGR 480
AYYS GTLVLSD+SPP MSSL++VS+D S S S G S+R SRALRE V+SLP+EGR
Sbjct: 416 AYYSVGTLVLSDSSPPAMSSLLVVSRDSSVHSQAGSSSGPSSRSSRALREVVSSLPIEGR 475
Query: 481 MLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRI 540
ML V D+LP PDTA T+QSLYSELE+CG E+SGES EK+ GKLWAR DLSTQHILPRR+I
Sbjct: 476 MLFVADVLPSPDTAATIQSLYSELEYCGVEVSGESYEKACGKLWARSDLSTQHILPRRKI 535
Query: 541 VVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSE 600
VVF+TMGMME+VFNRPVDILRRL E NSPRS+LEDFF RFG GEAAAMCLMLAARI++ E
Sbjct: 536 VVFTTMGMMELVFNRPVDILRRLLESNSPRSLLEDFFTRFGVGEAAAMCLMLAARIINFE 595
Query: 601 NLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQEAEPVFSGAYE 660
+LISN VA+KAAEAF DPR+VGMPQ +GS+ L+NTRTA GGFSMGQVVQEAEP+FSGA+E
Sbjct: 596 DLISNIVADKAAEAFEDPRIVGMPQFDGSSGLSNTRTATGGFSMGQVVQEAEPIFSGAHE 655
Query: 661 GLCLCASRLLFPLWELPVMVVK--GDAISENGVVVCRLSSGAMQVLENKIRSLEKFLRCI 718
GLCLC SRLLFPLWELPVM K D +SE+GVV+CRLS+ AM VLE+KIRSLEKFLR
Sbjct: 656 GLCLCTSRLLFPLWELPVMSKKTSSDTMSEDGVVICRLSTSAMHVLESKIRSLEKFLRSR 715
Query: 719 RNQRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFGSYSRNADSNGAGTSNKRQ 778
RNQRRGLYG VAG+GD++GSILYGTG++ A +++++RNLFG+YS NG ++NKRQ
Sbjct: 716 RNQRRGLYGCVAGLGDVTGSILYGTGSELGATERNMVRNLFGAYS-----NGGESANKRQ 770
Query: 779 RLPYSPAELAAIE----------------------LLSQHHVTRLVQGFDANLRQELVQL 816
RLPYSPAELAA E LLSQHHV RLVQ DANL+Q LVQL
Sbjct: 771 RLPYSPAELAATEVRAMECIRQLLLRSAEALFLLQLLSQHHVARLVQELDANLKQALVQL 830
Query: 817 TFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLA 876
TF QLVCSEEGD++ATRLISA+MEYYT DGRGTVDDIS RLREGCPSYFKESDYKF+LA
Sbjct: 831 TFHQLVCSEEGDQIATRLISAVMEYYTGSDGRGTVDDISPRLREGCPSYFKESDYKFYLA 890
Query: 877 VECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKA 936
VE LERAA+TSD+EEKEN+AREAF+FLSKVP SADL+TVC+RFEDLRFYEAVV LPLQKA
Sbjct: 891 VERLERAALTSDAEEKENVAREAFSFLSKVPGSADLQTVCKRFEDLRFYEAVVCLPLQKA 950
Query: 937 QALDPAGDAFNDQIDAATREYALVQRQQCYEIITSALRSLKGDSSQREFGSPVRPAGPRS 996
QALDPAGDAFNDQ+DA+ RE+AL QR+QCYEII +ALRSL SP+ A P
Sbjct: 951 QALDPAGDAFNDQLDASIREHALAQRKQCYEIIANALRSL---------ASPL--ASP-- 997
Query: 997 ALDPASRKKYICQIVQLGVQSPDRIFHEYLYRTMIDXXXXXXXXXXXXPDLVPFLQSAGR 1056
LD ASR +YICQIV LGVQS DR F EYLY+ MI+ PDLVPFLQ+AG
Sbjct: 998 TLDEASRSQYICQIVHLGVQSTDRAFREYLYKAMIELHLENELLEYGGPDLVPFLQNAGS 1057
Query: 1057 EPIQEVRAVSGITSAASLMGQTGTPIPSNEAKYFDLLARYYVLKRQHXXXXXXXXXXXXX 1116
+V AVS + +S +G +GT I S++AKYFDLLA+YYV KRQH
Sbjct: 1058 HSESQVGAVS---TGSSPLGHSGTQISSDQAKYFDLLAKYYVSKRQHVLAAHVFLRLAER 1114
Query: 1117 XSTDEKDAPTLDQRRQYLSNAILQAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQ 1176
+ D+PTL++RR LS A+LQAKNA+NSD LVGS +G D+GLLDLLEGKLAVL+FQ
Sbjct: 1115 RAISLGDSPTLERRRDDLSQAVLQAKNASNSDGLVGSAQGVSDSGLLDLLEGKLAVLQFQ 1174
Query: 1177 TKIKDELEAIASSLETSVDMSESTQNGSAPDSSSTTDANYAKIVREKAKELSLDLKSITQ 1236
KI+D+LEAIAS+ E+SV M +S QNG D S+ D N A E A E+S +LKS+TQ
Sbjct: 1175 IKIRDKLEAIASNFESSVAMQDSDQNGQVLDGDSSDDTNLANAANEMAMEVSSELKSVTQ 1234
Query: 1237 LYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAEACSVLKRV 1296
LYNEYAVPFELWEICLEMLYFANY+GDADSSIIRETWARLIDQALS+GGI EAC+VLKRV
Sbjct: 1235 LYNEYAVPFELWEICLEMLYFANYSGDADSSIIRETWARLIDQALSQGGIREACAVLKRV 1294
Query: 1297 GSHMYPGDGAVLPLDTLCLHLEKAALERLDSQVESVGDEDIXXXXXXXXXXXXEPVLNTY 1356
GSH+YPGDG VLPLD LCLHLE+AALER + ++E+V DEDI EPVLN Y
Sbjct: 1295 GSHIYPGDGVVLPLDVLCLHLERAALERSE-RIENVRDEDIAKALLAACKGAAEPVLNAY 1353
Query: 1357 D 1357
D
Sbjct: 1354 D 1354
>UNIPROTKB|F1NNT9 [details] [associations]
symbol:NUP155 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0017056
"structural constituent of nuclear pore" evidence=IEA]
InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913 GO:GO:0017056
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 GeneTree:ENSGT00390000016532
EMBL:AADN02052221 EMBL:AADN02052222 EMBL:AADN02052223
IPI:IPI00820543 Ensembl:ENSGALT00000039092 ArrayExpress:F1NNT9
Uniprot:F1NNT9
Length = 1348
Score = 465 (168.7 bits), Expect = 1.0e-83, Sum P(5) = 1.0e-83
Identities = 108/305 (35%), Positives = 173/305 (56%)
Query: 56 PLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCP 115
P + V LP LVE++ + N + G+FPEI RAW ++D+ +F+W ++ G
Sbjct: 77 PEISSVRRVPLPPELVEQFGHM--QCNCMMGVFPEISRAWLTIDSDIFMWNYED-GGDLA 133
Query: 116 EYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAE--- 172
+ G + I AVGL K K GIF +++LL+LATPV+++++G+ C+ GT P +
Sbjct: 134 YFDGLSETILAVGLVKPKGGIFQPHVRHLLVLATPVDIVILGLSCANTQAGTGPLNDSLS 193
Query: 173 --ISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY-KRCRKVC 229
+ L P P Y++P+D ++ IT TD GRI LAG+DG +YE+ Y +GW+ +RCRK+
Sbjct: 194 GGMQLLPDPLYSLPTDNTYISAITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKIN 253
Query: 230 HTAGVGNVISRWIVPNV--FRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDG 287
H+ + +S +++P++ F F DP+V++ DN R +LY R+E+ LQV+ LG +G G
Sbjct: 254 HSK---SALS-FLIPSLLQFTFSEDDPVVQIAIDNSRNILYTRSEKGVLQVYDLGQDGQG 309
Query: 288 PLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSD 347
+ + +N G T R+ KP +V I+ + ES L+AV
Sbjct: 310 MARVTSLSQNAIVSAA---GSIARTIDRSVF---KP-IVQIAVIENSESIDCQLLAVTHA 362
Query: 348 GRRMY 352
G R+Y
Sbjct: 363 GVRLY 367
Score = 302 (111.4 bits), Expect = 1.0e-83, Sum P(5) = 1.0e-83
Identities = 113/428 (26%), Positives = 184/428 (42%)
Query: 641 GFSMGQVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGA 700
G S+ + E VFSG + G+C+ +R++ +W+ ++V K S N VV SS
Sbjct: 645 GTSISSGIMGPEIVFSGRHNGICIYFARIIGNIWDGSIVVEKIFK-SGNREVVAIESSVP 703
Query: 701 MQVLE---NKIRSLEKFL-RCIRNQRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIR 756
VLE +++ L++FL R + G G + +L +L D Q + +
Sbjct: 704 SHVLECVLQELKGLQEFLDRNSQFATVGALGNPSTPANLQQRLLGFMRPDG-GSSQQVQQ 762
Query: 757 NLFGSYSRNADSNGAGTSNKRQRLPYSPAELAAI-ELLSQHHVTRLVQGFDANLRQELVQ 815
L Y A + Q+L + A+ +LL +H + +V L++ L
Sbjct: 763 ELQRKYHAEAQLTEKNSLQGIQQLVRKTCQALALWKLLCEHQFSVVVGELQKELQEHLKM 822
Query: 816 LTFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFL 875
F LV ++ L LI++L+ Y + VD IS L++ CP + D
Sbjct: 823 TAFKDLVIRDK--ELTGALIASLINCYIRDNA--AVDGISAHLQDICPLLYSTDDAVCSK 878
Query: 876 AVECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQK 935
A E L+R+ + EKE + RE+ K+ DL VC ++ +RFYE VV L L
Sbjct: 879 ANELLQRSRQAQNKLEKEKMLRESLKEYQKISNQVDLANVCAQYRQVRFYEGVVELSLTA 938
Query: 936 AQALDPAGDAFNDQIDAATRE-----YALVQRQQCYEIITSALRSLKGDS--SQREFGSP 988
A+ DP G + + E A +R Y+ IT L+ L S + + P
Sbjct: 939 AEKKDPQGLGLHFYKNGEPEEDAVGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVP 998
Query: 989 VRPAGPRSALDP--ASRKK---YICQIVQLGVQSPDRIFHEYLYRTMIDXXXXXXXXXXX 1043
+P P + DP S ++ + Q+++L +S D +F LY +I
Sbjct: 999 KKPGPPVLSSDPNMLSNEEAGHHFEQMLKLAQRSTDELFSIALYNWLIQVDLADKLLQVT 1058
Query: 1044 XPDLVPFL 1051
P L P+L
Sbjct: 1059 APFLEPYL 1066
Score = 112 (44.5 bits), Expect = 1.0e-83, Sum P(5) = 1.0e-83
Identities = 34/105 (32%), Positives = 50/105 (47%)
Query: 1080 TPIPSNEAKYFDLLARYYVLKRQHXXXXXXXXXXXXXXSTDEKDAPTLDQRRQYLSNAIL 1139
T I N+ +Y DLL RY+ R ST+ +L QR +Y++ AIL
Sbjct: 1070 TKIDQNKVRYMDLLWRYFEKNRNFSNAARVLAKLADLHSTEI----SLQQRLEYIARAIL 1125
Query: 1140 QAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELE 1184
AK++T S+ A D L LE K+ V R Q +I++ L+
Sbjct: 1126 SAKSSTAISSI------AADGEFLHELEEKMDVARIQLQIQETLQ 1164
Score = 110 (43.8 bits), Expect = 1.0e-83, Sum P(5) = 1.0e-83
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 1220 VREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQ 1279
V++ +L +L IT+LY E+A PF+L E L +++ A G +D +++ W +I++
Sbjct: 1173 VQDAVSQLDAELMDITKLYGEFADPFKLSECKLAIIHCA---GHSDPILVQTLWQEIIEK 1229
Query: 1280 ------ALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEK 1319
+LS +A S+ + +Y G PLD L LE+
Sbjct: 1230 ELSDSVSLSPADRMQALSLKMALLGKIYAGTPRYFPLDFLVQFLEQ 1275
Score = 94 (38.1 bits), Expect = 1.0e-83, Sum P(5) = 1.0e-83
Identities = 35/103 (33%), Positives = 45/103 (43%)
Query: 532 QHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELNS--PRSILEDFFNRFGAGEAAAMC 589
QH+LP +R V+ S G RPVD LR L N+ +E FF +A A C
Sbjct: 490 QHMLPPKRFVLLSAQGSFMFHKLRPVDQLRHLLVSNTGGDGEEIERFFKLHQEDQACATC 549
Query: 590 LMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNAL 632
L+LA S V+ A AF R G Q+ +AL
Sbjct: 550 LILAC----SNAACDTEVSAWATRAFF--RYGGEAQMRFPSAL 586
Score = 39 (18.8 bits), Expect = 1.6e-33, Sum P(4) = 1.6e-33
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 229 CHTAGVGNVISRWIVPNVFRFG 250
C A +S W FR+G
Sbjct: 554 CSNAACDTEVSAWATRAFFRYG 575
>UNIPROTKB|F1NPS0 [details] [associations]
symbol:NUP155 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0017056 "structural constituent of nuclear pore" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] [GO:0006998 "nuclear
envelope organization" evidence=IEA] [GO:0086014 "regulation of
atrial cardiac muscle cell action potential" evidence=IEA]
InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913 GO:GO:0006998
GO:GO:0017056 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 OMA:SSDRMHA
GeneTree:ENSGT00390000016532 EMBL:AADN02052221 EMBL:AADN02052222
EMBL:AADN02052223 IPI:IPI00578913 Ensembl:ENSGALT00000005842
ArrayExpress:F1NPS0 Uniprot:F1NPS0
Length = 1394
Score = 465 (168.7 bits), Expect = 1.4e-83, Sum P(5) = 1.4e-83
Identities = 108/305 (35%), Positives = 173/305 (56%)
Query: 56 PLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCP 115
P + V LP LVE++ + N + G+FPEI RAW ++D+ +F+W ++ G
Sbjct: 77 PEISSVRRVPLPPELVEQFGHM--QCNCMMGVFPEISRAWLTIDSDIFMWNYED-GGDLA 133
Query: 116 EYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAE--- 172
+ G + I AVGL K K GIF +++LL+LATPV+++++G+ C+ GT P +
Sbjct: 134 YFDGLSETILAVGLVKPKGGIFQPHVRHLLVLATPVDIVILGLSCANTQAGTGPLNDSLS 193
Query: 173 --ISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY-KRCRKVC 229
+ L P P Y++P+D ++ IT TD GRI LAG+DG +YE+ Y +GW+ +RCRK+
Sbjct: 194 GGMQLLPDPLYSLPTDNTYISAITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKIN 253
Query: 230 HTAGVGNVISRWIVPNV--FRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDG 287
H+ + +S +++P++ F F DP+V++ DN R +LY R+E+ LQV+ LG +G G
Sbjct: 254 HSK---SALS-FLIPSLLQFTFSEDDPVVQIAIDNSRNILYTRSEKGVLQVYDLGQDGQG 309
Query: 288 PLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSD 347
+ + +N G T R+ KP +V I+ + ES L+AV
Sbjct: 310 MARVTSLSQNAIVSAA---GSIARTIDRSVF---KP-IVQIAVIENSESIDCQLLAVTHA 362
Query: 348 GRRMY 352
G R+Y
Sbjct: 363 GVRLY 367
Score = 302 (111.4 bits), Expect = 1.4e-83, Sum P(5) = 1.4e-83
Identities = 113/428 (26%), Positives = 184/428 (42%)
Query: 641 GFSMGQVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGA 700
G S+ + E VFSG + G+C+ +R++ +W+ ++V K S N VV SS
Sbjct: 645 GTSISSGIMGPEIVFSGRHNGICIYFARIIGNIWDGSIVVEKIFK-SGNREVVAIESSVP 703
Query: 701 MQVLE---NKIRSLEKFL-RCIRNQRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIR 756
VLE +++ L++FL R + G G + +L +L D Q + +
Sbjct: 704 SHVLECVLQELKGLQEFLDRNSQFATVGALGNPSTPANLQQRLLGFMRPDG-GSSQQVQQ 762
Query: 757 NLFGSYSRNADSNGAGTSNKRQRLPYSPAELAAI-ELLSQHHVTRLVQGFDANLRQELVQ 815
L Y A + Q+L + A+ +LL +H + +V L++ L
Sbjct: 763 ELQRKYHAEAQLTEKNSLQGIQQLVRKTCQALALWKLLCEHQFSVVVGELQKELQEHLKM 822
Query: 816 LTFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFL 875
F LV ++ L LI++L+ Y + VD IS L++ CP + D
Sbjct: 823 TAFKDLVIRDK--ELTGALIASLINCYIRDNA--AVDGISAHLQDICPLLYSTDDAVCSK 878
Query: 876 AVECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQK 935
A E L+R+ + EKE + RE+ K+ DL VC ++ +RFYE VV L L
Sbjct: 879 ANELLQRSRQAQNKLEKEKMLRESLKEYQKISNQVDLANVCAQYRQVRFYEGVVELSLTA 938
Query: 936 AQALDPAGDAFNDQIDAATRE-----YALVQRQQCYEIITSALRSLKGDS--SQREFGSP 988
A+ DP G + + E A +R Y+ IT L+ L S + + P
Sbjct: 939 AEKKDPQGLGLHFYKNGEPEEDAVGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVP 998
Query: 989 VRPAGPRSALDP--ASRKK---YICQIVQLGVQSPDRIFHEYLYRTMIDXXXXXXXXXXX 1043
+P P + DP S ++ + Q+++L +S D +F LY +I
Sbjct: 999 KKPGPPVLSSDPNMLSNEEAGHHFEQMLKLAQRSTDELFSIALYNWLIQVDLADKLLQVT 1058
Query: 1044 XPDLVPFL 1051
P L P+L
Sbjct: 1059 APFLEPYL 1066
Score = 112 (44.5 bits), Expect = 1.4e-83, Sum P(5) = 1.4e-83
Identities = 34/105 (32%), Positives = 50/105 (47%)
Query: 1080 TPIPSNEAKYFDLLARYYVLKRQHXXXXXXXXXXXXXXSTDEKDAPTLDQRRQYLSNAIL 1139
T I N+ +Y DLL RY+ R ST+ +L QR +Y++ AIL
Sbjct: 1070 TKIDQNKVRYMDLLWRYFEKNRNFSNAARVLAKLADLHSTEI----SLQQRLEYIARAIL 1125
Query: 1140 QAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELE 1184
AK++T S+ A D L LE K+ V R Q +I++ L+
Sbjct: 1126 SAKSSTAISSI------AADGEFLHELEEKMDVARIQLQIQETLQ 1164
Score = 110 (43.8 bits), Expect = 1.4e-83, Sum P(5) = 1.4e-83
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 1220 VREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQ 1279
V++ +L +L IT+LY E+A PF+L E L +++ A G +D +++ W +I++
Sbjct: 1173 VQDAVSQLDAELMDITKLYGEFADPFKLSECKLAIIHCA---GHSDPILVQTLWQEIIEK 1229
Query: 1280 ------ALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEK 1319
+LS +A S+ + +Y G PLD L LE+
Sbjct: 1230 ELSDSVSLSPADRMQALSLKMALLGKIYAGTPRYFPLDFLVQFLEQ 1275
Score = 94 (38.1 bits), Expect = 1.4e-83, Sum P(5) = 1.4e-83
Identities = 35/103 (33%), Positives = 45/103 (43%)
Query: 532 QHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELNS--PRSILEDFFNRFGAGEAAAMC 589
QH+LP +R V+ S G RPVD LR L N+ +E FF +A A C
Sbjct: 490 QHMLPPKRFVLLSAQGSFMFHKLRPVDQLRHLLVSNTGGDGEEIERFFKLHQEDQACATC 549
Query: 590 LMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNAL 632
L+LA S V+ A AF R G Q+ +AL
Sbjct: 550 LILAC----SNAACDTEVSAWATRAFF--RYGGEAQMRFPSAL 586
Score = 39 (18.8 bits), Expect = 2.0e-33, Sum P(4) = 2.0e-33
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 229 CHTAGVGNVISRWIVPNVFRFG 250
C A +S W FR+G
Sbjct: 554 CSNAACDTEVSAWATRAFFRYG 575
>UNIPROTKB|O75694 [details] [associations]
symbol:NUP155 "Nuclear pore complex protein Nup155"
species:9606 "Homo sapiens" [GO:0017056 "structural constituent of
nuclear pore" evidence=IEA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0086014 "regulation of atrial cardiac muscle cell
action potential" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0005215 "transporter activity" evidence=TAS] [GO:0005635
"nuclear envelope" evidence=IDA;TAS] [GO:0006998 "nuclear envelope
organization" evidence=IDA] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0008645 "hexose transport" evidence=TAS]
[GO:0010827 "regulation of glucose transport" evidence=TAS]
[GO:0015758 "glucose transport" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_111217 Reactome:REACT_15518
InterPro:IPR004870 GO:GO:0005635 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0016032 GO:GO:0044281 GO:GO:0015031
GO:GO:0005975 GO:GO:0031965 GO:GO:0005643 GO:GO:0019221
GO:GO:0015758 GO:GO:0006913 GO:GO:0010827 GO:GO:0055085
GO:GO:0005215 Orphanet:334 GO:GO:0006998 GO:GO:0051028
GO:GO:0017056 eggNOG:COG5308 KO:K14312 InterPro:IPR007187
InterPro:IPR014908 PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801
EMBL:AJ007558 EMBL:AF165926 EMBL:AB018334 EMBL:BC039257
EMBL:AL117585 IPI:IPI00026625 IPI:IPI00376609 PIR:T17317
RefSeq:NP_004289.1 RefSeq:NP_705618.1 UniGene:Hs.547696
ProteinModelPortal:O75694 IntAct:O75694 MINT:MINT-1200468
STRING:O75694 PhosphoSite:O75694 PaxDb:O75694 PRIDE:O75694
Ensembl:ENST00000231498 Ensembl:ENST00000381843 GeneID:9631
KEGG:hsa:9631 UCSC:uc003jkt.1 CTD:9631 GeneCards:GC05M037327
HGNC:HGNC:8063 HPA:HPA037774 HPA:HPA037775 MIM:606694
neXtProt:NX_O75694 PharmGKB:PA31849 HOGENOM:HOG000043927
HOVERGEN:HBG052680 InParanoid:O75694 OMA:SSDRMHA OrthoDB:EOG4VHK5K
PhylomeDB:O75694 GenomeRNAi:9631 NextBio:36143 ArrayExpress:O75694
Bgee:O75694 CleanEx:HS_NUP155 Genevestigator:O75694
GermOnline:ENSG00000113569 Uniprot:O75694
Length = 1391
Score = 437 (158.9 bits), Expect = 2.5e-79, Sum P(5) = 2.5e-79
Identities = 123/373 (32%), Positives = 201/373 (53%)
Query: 2 SSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTT------HPREWP 55
S+ L + NAG ++ DR +E D+ E L S ++P + +P + P
Sbjct: 13 STSAAALQEALENAGRLI-DRQLQEDRMYPDLSELLMVSA-PNNPTVSGMSDMDYPLQGP 70
Query: 56 PLVEVVDTWD--------LPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRF 107
L+ V + + LP LVE++ + N + G+FP I RAW ++D+ +F+W +
Sbjct: 71 GLLSVPNLPEISSIRRVPLPPELVEQFGHM--QCNCMMGVFPPISRAWLTIDSDIFMWNY 128
Query: 108 DKWDGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCS----GA 163
+ G + G + I AVGL K K GIF +++LL+LATPV+++++G+ + G+
Sbjct: 129 ED-GGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGS 187
Query: 164 GDGTDPYAE-ISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY 222
G D + + L P P Y++P+D + IT TD GRI LAG+DG +YE+ Y +GW+
Sbjct: 188 GVLNDSLSGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWF 247
Query: 223 -KRCRKVCHTAGVGNVISRWIVPNV--FRFGAVDPIVELVFDNERQLLYARTEEMKLQVF 279
+RCRK+ H+ + +S ++VP++ F F DPI+++ DN R +LY R+E+ +QV+
Sbjct: 248 SQRCRKINHSK---SSLS-FLVPSLLQFTFSEDDPILQIAIDNSRNILYTRSEKGVIQVY 303
Query: 280 VLGPNGDGPLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWL 339
LG +G G + +VA N + G T R+ KP +V I+ + ES
Sbjct: 304 DLGQDGQG-MSRVASVSQ--NAIVSAAGNIARTIDRSVF---KP-IVQIAVIENSESLDC 356
Query: 340 HLVAVLSDGRRMY 352
L+AV G R+Y
Sbjct: 357 QLLAVTHAGVRLY 369
Score = 295 (108.9 bits), Expect = 2.5e-79, Sum P(5) = 2.5e-79
Identities = 120/451 (26%), Positives = 190/451 (42%)
Query: 631 ALANTRTAAGGFSMGQVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENG 690
AL N T A S V E V+SG + G+C+ SR++ +W+ +VV+ S N
Sbjct: 638 ALGNPATQATNMSC---VTGPEIVYSGKHNGICIYFSRIMGNIWDAS-LVVERIFKSGNR 693
Query: 691 VVVCRLSSGAMQVLEN---KIRSLEKFLRCIRNQRRGLYGYVAGMGDLSGSI---LYGTG 744
+ SS Q+LE+ +++ L++FL RN + G G + + + L G
Sbjct: 694 EITAIESSVPCQLLESVLQELKGLQEFLD--RNSQ--FAGGPLGNPNTTAKVQQRLIGFM 749
Query: 745 ADSVAGDQSLIRNLFGSYSRNADSNGAGTSNKRQRLPYSPAELAAIELLSQHHVTRLVQG 804
Q + + L + S +Q + S LA +LL +H T +V
Sbjct: 750 RPENGNPQQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAE 809
Query: 805 FDANLRQELVQLTFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPS 864
L+++L TF LV ++ L LI++L+ Y + VD IS L++ CP
Sbjct: 810 LQKELQEQLKITTFKDLVIRDK--ELTGALIASLINCYIRDNA--AVDGISLHLQDICPL 865
Query: 865 YFKESDYKFFLAVECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRF 924
+ D A E L+R+ + EKE + RE+ K+ DL VC ++ +RF
Sbjct: 866 LYSTDDAICSKANELLQRSRQVQNKTEKERMLRESLKEYQKISNQVDLSNVCAQYRQVRF 925
Query: 925 YEAVVRLPLQKAQALDPAGDAFNDQIDAATRE-----YALVQRQQCYEIITSALRSLKGD 979
YE VV L L A+ DP G + E A +R Y+ IT L+ L
Sbjct: 926 YEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAFQERLNSYKCITDTLQELVNQ 985
Query: 980 S--SQREFGSPVRPAGPRSALDP--ASRKK---YICQIVQLGVQSPDRIFHEYLYRTMID 1032
S + + P +P P + DP S ++ + Q+++L +S D +F LY +I
Sbjct: 986 SKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKLSQRSKDELFSIALYNWLIQ 1045
Query: 1033 XXXXXXXXXXXXPDLVPFLQSAGREPIQEVR 1063
P L P L + VR
Sbjct: 1046 VDLADKLLQVASPFLEPHLVRMAKVDQNRVR 1076
Score = 113 (44.8 bits), Expect = 2.5e-79, Sum P(5) = 2.5e-79
Identities = 37/121 (30%), Positives = 57/121 (47%)
Query: 1082 IPSNEAKYFDLLARYYVLKRQHXXXXXXXXXXXXXXSTDEKDAPTLDQRRQYLSNAILQA 1141
+ N +Y DLL RYY R ST+ +L QR +Y++ AIL A
Sbjct: 1070 VDQNRVRYMDLLWRYYEKNRSFSNAARVLSRLADMHSTEI----SLQQRLEYIARAILSA 1125
Query: 1142 KNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELE---AIASSLETSVDMSE 1198
K++T S+ A D L LE K+ V R Q +I++ L+ + SS++ +V +
Sbjct: 1126 KSSTAISSI------AADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLD 1179
Query: 1199 S 1199
S
Sbjct: 1180 S 1180
Score = 101 (40.6 bits), Expect = 2.5e-79, Sum P(5) = 2.5e-79
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 1220 VREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQ 1279
V++ +L +L IT+LY E+A PF+L E L +++ A Y+ D +++ W +I++
Sbjct: 1171 VQDAVSQLDSELMDITKLYGEFADPFKLAECKLAIIHCAGYS---DPILVQTLWQDIIEK 1227
Query: 1280 ------ALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEK 1319
LS A S+ + +Y G PLD + LE+
Sbjct: 1228 ELSDSVTLSSSDRMHALSLKIVLLGKIYAGTPRFFPLDFIVQFLEQ 1273
Score = 98 (39.6 bits), Expect = 2.5e-79, Sum P(5) = 2.5e-79
Identities = 40/129 (31%), Positives = 53/129 (41%)
Query: 532 QHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELN--SPRSILEDFFNRFGAGEAAAMC 589
QH+LP ++ V+ S G + RPVD LR L N +E FF +A A C
Sbjct: 492 QHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATC 551
Query: 590 LMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQ 649
L+LA S V+ A AF R G Q+ L G +G V
Sbjct: 552 LILAC----STAACDREVSAWATRAFF--RYGGEAQMRFPTTLPPPSNV--GPILGSPVY 603
Query: 650 EAEPVFSGA 658
+ PV SG+
Sbjct: 604 SSSPVPSGS 612
Score = 44 (20.5 bits), Expect = 2.3e-32, Sum P(4) = 2.3e-32
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 229 CHTAGVGNVISRWIVPNVFRFG 250
C TA +S W FR+G
Sbjct: 556 CSTAACDREVSAWATRAFFRYG 577
>UNIPROTKB|F1MNT1 [details] [associations]
symbol:NUP155 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0086014 "regulation of atrial cardiac muscle cell
action potential" evidence=IEA] [GO:0006998 "nuclear envelope
organization" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0017056 "structural constituent of nuclear pore"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913 GO:GO:0006998
GO:GO:0017056 KO:K14312 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 CTD:9631 OMA:SSDRMHA
GeneTree:ENSGT00390000016532 EMBL:DAAA02050616 IPI:IPI00710810
RefSeq:NP_001179036.1 UniGene:Bt.19254 PRIDE:F1MNT1
Ensembl:ENSBTAT00000003193 GeneID:506738 KEGG:bta:506738
NextBio:20867733 Uniprot:F1MNT1
Length = 1391
Score = 450 (163.5 bits), Expect = 6.6e-79, Sum P(5) = 6.6e-79
Identities = 126/373 (33%), Positives = 201/373 (53%)
Query: 2 SSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTT------HPREWP 55
S+ L + NAG ++ DR +E D+ E L S ++P + +P + P
Sbjct: 13 STSAAALQEALENAGRLI-DRQLQEDRMYPDLSELLMVSA-PNNPTVSGMSDMDYPLQGP 70
Query: 56 PLVEVVDTWD--------LPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRF 107
L+ V + D LP LVE++ + N + G+FP I RAW ++D+ +F+W +
Sbjct: 71 GLLSVPNLPDISSIRRVPLPPELVEQFGHM--QCNCMMGVFPPISRAWLTIDSDIFMWNY 128
Query: 108 DKWDGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCS----GA 163
+ G + G + I AVGL K KPGIF +++LL+LATPV+++++G+ + G+
Sbjct: 129 ED-GGDLAYFDGLSETILAVGLVKPKPGIFQPHVRHLLVLATPVDIVILGLSYTNLQTGS 187
Query: 164 GDGTDPYAE-ISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY 222
G D + L P P Y++P+D + IT TD GRI LAG+DG +YE+ Y +GW+
Sbjct: 188 GVLNDSMCGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWF 247
Query: 223 -KRCRKVCHTAGVGNVISRWIVPNV--FRFGAVDPIVELVFDNERQLLYARTEEMKLQVF 279
+RCRK+ H+ + +S ++VP++ F F DPIV++ DN R +LY R+E+ +QV+
Sbjct: 248 SQRCRKINHSK---SPLS-FLVPSLLQFTFSEDDPIVQIAVDNSRNILYTRSEKGVIQVY 303
Query: 280 VLGPNGDGPLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWL 339
LG +G G + +VA N + G T R+ KP +V I+ + ES
Sbjct: 304 DLGHDGQG-MNRVASVSQ--NSIVSAAGNIARTIDRSVF---KP-IVQIAVIENSESLDC 356
Query: 340 HLVAVLSDGRRMY 352
L+AV G R+Y
Sbjct: 357 QLLAVTHAGVRLY 369
Score = 275 (101.9 bits), Expect = 6.6e-79, Sum P(5) = 6.6e-79
Identities = 120/473 (25%), Positives = 198/473 (41%)
Query: 615 FVDPRLVGMPQLEGSNALA-NTRTAAGGFSMGQVVQEA-----EPVFSGAYEGLCLCASR 668
+ +P +G P +G + A +T A G Q + E V+SG + G+C+ SR
Sbjct: 614 YPNPSFLGTPS-QGVHPPAVSTPVCALGSPATQATSMSCMAGPEIVYSGKHNGICIYFSR 672
Query: 669 LLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLEN---KIRSLEKFLRCIRNQRRGL 725
++ +W+ +VV+ S N + SS Q+LE+ +++ L++FL RN +
Sbjct: 673 IMGNIWDAS-LVVERVFKSGNREITAIESSVPSQLLESVLLELKGLQEFLD--RNSQ--F 727
Query: 726 YGYVAGMGDLSGSI---LYGTGADSVAGDQSLIRNLFGSYSRNADSNGAGTSNKRQRLPY 782
G G + + + L G Q + + L S +Q +
Sbjct: 728 TGGPLGNPNTAAKVQQRLIGFMRPENGNTQQMQQELQRKLHEAQLSEKISLQAIQQLVRK 787
Query: 783 SPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLISALMEYY 842
S LA +LL +H T +V +++L TF LV ++ L LI++L+ Y
Sbjct: 788 SYQALALWKLLCEHQFTVIVGELQKEFQEQLKITTFKDLVIRDK--ELTGALIASLINCY 845
Query: 843 TDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAVTSDSEEKENLAREAFNF 902
+ VD IS L++ CP + D A E L+ + + EKE + RE+
Sbjct: 846 IRDNA--AVDGISLHLQDICPLLYSTDDAICSKANELLQHSRQVQNKIEKERMLRESLKE 903
Query: 903 LSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDAFNDQIDAATRE-----Y 957
K+ DL +VC ++ +RFYE VV L L A+ DP G + E
Sbjct: 904 YQKISNQVDLSSVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQ 963
Query: 958 ALVQRQQCYEIITSALRSLKGDS--SQREFGSPVRPAGPRSALDP--ASRKK---YICQI 1010
A +R Y+ IT L+ L S + + P +P P + DP S ++ + Q+
Sbjct: 964 AFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQM 1023
Query: 1011 VQLGVQSPDRIFHEYLYRTMIDXXXXXXXXXXXXPDLVPFLQSAGREPIQEVR 1063
++L +S D +F LY +I P L P L + +VR
Sbjct: 1024 LKLSQRSKDELFSIALYNWLIQADLADKLLQIASPFLEPHLVRMAKVDQNKVR 1076
Score = 116 (45.9 bits), Expect = 6.6e-79, Sum P(5) = 6.6e-79
Identities = 37/121 (30%), Positives = 59/121 (48%)
Query: 1082 IPSNEAKYFDLLARYYVLKRQHXXXXXXXXXXXXXXSTDEKDAPTLDQRRQYLSNAILQA 1141
+ N+ +Y DLL RYY R ST+ +L QR +Y++ AIL A
Sbjct: 1070 VDQNKVRYMDLLWRYYEKNRSFSSAARVLSKLADMHSTEI----SLQQRLEYIARAILSA 1125
Query: 1142 KNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELE---AIASSLETSVDMSE 1198
K++T + ST A D L LE K+ V R Q +I++ L+ + SS++ ++ +
Sbjct: 1126 KSST----AISST--AADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAISQLD 1179
Query: 1199 S 1199
S
Sbjct: 1180 S 1180
Score = 100 (40.3 bits), Expect = 6.6e-79, Sum P(5) = 6.6e-79
Identities = 41/128 (32%), Positives = 54/128 (42%)
Query: 532 QHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELN--SPRSILEDFFNRFGAGEAAAMC 589
QH+LP ++ V+ S G + RPVD LR L N +E FF +A A C
Sbjct: 492 QHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATC 551
Query: 590 LMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQ 649
L+LA S V+ A AF R G Q+ L T + G +G V
Sbjct: 552 LILAC----STAACDREVSAWATRAFF--RYGGEAQMRFPTTLP-TPSNVGPI-LGSPVY 603
Query: 650 EAEPVFSG 657
+ PV SG
Sbjct: 604 SSSPVPSG 611
Score = 98 (39.6 bits), Expect = 6.6e-79, Sum P(5) = 6.6e-79
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 1220 VREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQ 1279
V++ +L +L IT+LY E+A PF+L E L +++ A Y+ D +++ W +I++
Sbjct: 1171 VQDAISQLDSELMDITKLYGEFADPFKLAECKLAIIHCAGYS---DPILVQTLWQDIIEK 1227
Query: 1280 ------ALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEK 1319
LS A S+ + +Y G PLD + LE+
Sbjct: 1228 ELNESVTLSSPDRMHALSLKIVLLGKIYAGTPRFFPLDFIVQFLEQ 1273
Score = 44 (20.5 bits), Expect = 3.2e-30, Sum P(4) = 3.2e-30
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 229 CHTAGVGNVISRWIVPNVFRFG 250
C TA +S W FR+G
Sbjct: 556 CSTAACDREVSAWATRAFFRYG 577
>MGI|MGI:2181182 [details] [associations]
symbol:Nup155 "nucleoporin 155" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IMP] [GO:0006606 "protein
import into nucleus" evidence=IMP] [GO:0006810 "transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0006998 "nuclear envelope organization"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017056 "structural
constituent of nuclear pore" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0086014 "regulation of atrial cardiac
muscle cell action potential" evidence=IMP] InterPro:IPR004870
MGI:MGI:2181182 GO:GO:0031965 GO:GO:0005643 GO:GO:0006998
GO:GO:0006606 GO:GO:0006406 GO:GO:0086014 GO:GO:0017056
eggNOG:COG5308 KO:K14312 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 CTD:9631
HOVERGEN:HBG052680 OMA:SSDRMHA OrthoDB:EOG4VHK5K EMBL:AF322375
IPI:IPI00453821 RefSeq:NP_573490.3 UniGene:Mm.295168
ProteinModelPortal:Q99P88 IntAct:Q99P88 STRING:Q99P88
PhosphoSite:Q99P88 PaxDb:Q99P88 PRIDE:Q99P88
Ensembl:ENSMUST00000163765 GeneID:170762 KEGG:mmu:170762
GeneTree:ENSGT00390000016532 InParanoid:Q99P88 NextBio:370370
Bgee:Q99P88 CleanEx:MM_NUP155 Genevestigator:Q99P88
GermOnline:ENSMUSG00000022142 Uniprot:Q99P88
Length = 1391
Score = 437 (158.9 bits), Expect = 1.1e-77, Sum P(5) = 1.1e-77
Identities = 108/305 (35%), Positives = 173/305 (56%)
Query: 56 PLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCP 115
P + + LP LVE++ + N + G+FP I RAW ++D+ +F+W ++ G
Sbjct: 79 PEISTIRRVPLPPELVEQFGHM--QCNCMMGVFPPISRAWLTIDSDIFMWNYED-GGDLA 135
Query: 116 EYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCS----GAGDGTDPYA 171
+ G + I AVGL K K GIF +++LL+LATPV+++++G+ + G+G D
Sbjct: 136 YFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANVQTGSGILNDSMC 195
Query: 172 E-ISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY-KRCRKVC 229
+ L P P Y++P+D + IT TD GRI LAG+DG +YE+ Y +GW+ +RCRK+
Sbjct: 196 GGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKIN 255
Query: 230 HTAGVGNVISRWIVPNV--FRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDG 287
H+ + +S ++VP++ F F DPIV++ DN R +LY R+E+ +QV+ LG +G G
Sbjct: 256 HSK---SSLS-FLVPSLLQFTFSEDDPIVQIEIDNSRNILYTRSEKGVIQVYDLGHDGQG 311
Query: 288 PLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSD 347
+ +VA N + G T R+ KP +V I+ + + ES L+AV
Sbjct: 312 -MSRVASVSQ--NAIVSAAGNIARTIDRSVF---KP-IVQIAVIESSESLDCQLLAVTHA 364
Query: 348 GRRMY 352
G R+Y
Sbjct: 365 GVRLY 369
Score = 278 (102.9 bits), Expect = 1.1e-77, Sum P(5) = 1.1e-77
Identities = 109/430 (25%), Positives = 182/430 (42%)
Query: 652 EPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLEN---KI 708
E V+SG + G+C+ SR++ +W+ +VV+ S N + SS +Q+LE+ ++
Sbjct: 656 EIVYSGKHNGICIYFSRIMGNIWDAS-LVVERVFKSSNREITAIESSVPVQLLESVLQEL 714
Query: 709 RSLEKFLRCIRNQRRGLYGYVAGMGDLSGSI---LYGTGADSVAGDQSLIRNLFGSYSRN 765
+ L++FL RN + G G + + + L G Q + + L +
Sbjct: 715 KGLQEFLD--RNSQ--FSGGPLGNPNTTARVQQRLVGFMRPENGNTQQMQQELQRKFQEA 770
Query: 766 ADSNGAGTSNKRQRLPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSE 825
S +Q + S LA +LL +H + +V +++L TF LV +
Sbjct: 771 QLSEKISLQAIQQLVRKSYQALALWKLLCEHQFSVIVGELQKEFQEQLKITTFKDLVIRD 830
Query: 826 EGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAV 885
+ + LI++L+ Y + VD IS L++ CP + D A E L+R+
Sbjct: 831 K--EVTGALIASLINCYIRDNA--AVDGISLHLQDTCPLLYSTDDAVCSKANELLQRSRQ 886
Query: 886 TSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDA 945
E+E + RE+ K+ DL +VC ++ +RFYE VV L L A+ DP G
Sbjct: 887 VQSKTERERMLRESLKEYQKISNQVDLPSVCAQYRQVRFYEGVVELSLTAAEKKDPQGLG 946
Query: 946 FNDQIDAATRE-----YALVQRQQCYEIITSALRSLKGDS--SQREFGSPVRPAGPRSAL 998
+ E +R Y+ IT L+ L S + + P +P P +
Sbjct: 947 LHFYKHGEPEEDVVGLQTFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSS 1006
Query: 999 DP--ASRKK---YICQIVQLGVQSPDRIFHEYLYRTMIDXXXXXXXXXXXXPDLVPFLQS 1053
DP S ++ + Q+++L +S D +F LY +I P L P L
Sbjct: 1007 DPNMLSNEEAGHHFEQMLKLAQRSKDELFSIALYNWLIQADLADKLLQIASPFLEPHLVR 1066
Query: 1054 AGREPIQEVR 1063
R VR
Sbjct: 1067 MARVDQNRVR 1076
Score = 113 (44.8 bits), Expect = 1.1e-77, Sum P(5) = 1.1e-77
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 1082 IPSNEAKYFDLLARYYVLKRQHXXXXXXXXXXXXXXSTDEKDAPTLDQRRQYLSNAILQA 1141
+ N +Y DLL RYY R ST+ +L QR +Y++ AIL A
Sbjct: 1070 VDQNRVRYMDLLWRYYEKNRSFSSAARVLSKLADMHSTEI----SLQQRLEYIARAILSA 1125
Query: 1142 KNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELE---AIASSLETSVDMSE 1198
K++T S+ A D L LE K+ V R Q +I++ L+ + SS++ ++ +
Sbjct: 1126 KSSTAISSI------AADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAISQLD 1179
Query: 1199 S 1199
S
Sbjct: 1180 S 1180
Score = 104 (41.7 bits), Expect = 1.1e-77, Sum P(5) = 1.1e-77
Identities = 31/106 (29%), Positives = 52/106 (49%)
Query: 1220 VREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQ 1279
V++ +L +L IT+LY E+A PF+L E L +++ A Y+ D ++ W +I++
Sbjct: 1171 VQDAISQLDSELMDITKLYGEFADPFKLAECKLAVIHCAGYS---DPILVHTLWQDIIEK 1227
Query: 1280 ------ALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEK 1319
ALS A S+ + +Y G PLD + LE+
Sbjct: 1228 ELNDSVALSSSDRMHALSLKLVLLGKIYAGTPRFFPLDFIVQFLEQ 1273
Score = 96 (38.9 bits), Expect = 1.1e-77, Sum P(5) = 1.1e-77
Identities = 40/129 (31%), Positives = 55/129 (42%)
Query: 532 QHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELN--SPRSILEDFFNRFGAGEAAAMC 589
QH+LP ++ V+ S G + RPVD LR L N +E FF +A A C
Sbjct: 492 QHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATC 551
Query: 590 LMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQ 649
L+LA S V+ A AF R G Q+ L T + G +G +
Sbjct: 552 LILAC----STAACDREVSAWATRAFF--RYGGEAQMRFPATLP-TPSNVGPI-LGSPMY 603
Query: 650 EAEPVFSGA 658
+ PV SG+
Sbjct: 604 SSSPVPSGS 612
Score = 44 (20.5 bits), Expect = 2.9e-30, Sum P(5) = 2.9e-30
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 229 CHTAGVGNVISRWIVPNVFRFG 250
C TA +S W FR+G
Sbjct: 556 CSTAACDREVSAWATRAFFRYG 577
Score = 39 (18.8 bits), Expect = 9.4e-72, Sum P(5) = 9.4e-72
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 433 ASPPTMSSLIIVSKDPSSQS 452
A PPTMS+ + P+ Q+
Sbjct: 627 AQPPTMSTPMCAVGSPAMQA 646
>UNIPROTKB|F6XTD9 [details] [associations]
symbol:NUP155 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0017056 "structural constituent of nuclear
pore" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913 GO:GO:0017056
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 OMA:SSDRMHA GeneTree:ENSGT00390000016532
Ensembl:ENSCAFT00000029657 EMBL:AAEX03003166 Uniprot:F6XTD9
Length = 1390
Score = 440 (159.9 bits), Expect = 2.2e-77, Sum P(5) = 2.2e-77
Identities = 108/305 (35%), Positives = 172/305 (56%)
Query: 56 PLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCP 115
P + + LP LVE++ + N + G+FP I RAW ++D+ +F+W ++ G
Sbjct: 79 PEISSIRRVPLPPELVEQFGHM--QCNCMMGVFPPISRAWLTIDSDIFMWNYED-GGDLA 135
Query: 116 EYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCS----GAGDGTDPYA 171
+ G + I AVGL K K GIF +++LL+LATPV+++++G+ + G+G D
Sbjct: 136 YFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGSGVLNDSMC 195
Query: 172 E-ISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY-KRCRKVC 229
+ L P P Y++P+D + IT TD GRI LAG+DG +YE+ Y +GW+ +RCRK+
Sbjct: 196 GGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKIN 255
Query: 230 HTAGVGNVISRWIVPNV--FRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDG 287
H+ + +S ++VP++ F F DPIV++ DN R +LY R+E+ +QV+ LG +G G
Sbjct: 256 HSK---SALS-FLVPSLLQFTFSEDDPIVQIAIDNSRNILYTRSEKGVIQVYDLGQDGQG 311
Query: 288 PLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSD 347
+ +VA N + G T R+ KP +V I+ + ES L+AV
Sbjct: 312 -MSRVASVSQ--NSIVSAAGNIARTIDRSVF---KP-IVQIAVIENSESLDCQLLAVTHA 364
Query: 348 GRRMY 352
G R+Y
Sbjct: 365 GVRLY 369
Score = 284 (105.0 bits), Expect = 2.2e-77, Sum P(5) = 2.2e-77
Identities = 120/477 (25%), Positives = 200/477 (41%)
Query: 611 AAEAFVDPRLVGMPQLEGSNALA-NTRTAAGGFSMGQVVQEA-----EPVFSGAYEGLCL 664
++ + +P +G P +G + A +T G Q + E V+SG + G+C+
Sbjct: 609 SSSPYPNPSFLGTPS-QGVHPPAMSTPVCVSGNPATQAASMSCMAAPEIVYSGKHNGICI 667
Query: 665 CASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLEN---KIRSLEKFLRCIRNQ 721
SR++ +W+ +VV+ S N + SS Q+LE+ +++ L++FL RN
Sbjct: 668 YFSRIMGNIWDAS-LVVERVFKSGNREITAIESSVPSQLLESVLQELKGLQEFLD--RNS 724
Query: 722 RRGLYGYVAGMGDLSGSI---LYGTGADSVAGDQSLIRNLFGSYSRNADSNGAGTSNKRQ 778
+ G G + + + L G Q + + L + S +Q
Sbjct: 725 Q--FAGGPLGNPNTTAKVQQRLIGFMRPENGNTQQMQQELQRKFHEAQLSEKVSLQAIQQ 782
Query: 779 RLPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLISAL 838
+ S LA +LL +H T +V +++L TF LV ++ L LI++L
Sbjct: 783 LVRKSYQALALWKLLCEHQFTVIVGELQKEFQEQLKITTFKDLVIRDK--ELTGALIASL 840
Query: 839 MEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAVTSDSEEKENLARE 898
+ Y + VD IS L++ CP + D A E L+R+ + EKE + RE
Sbjct: 841 INCYIRDNA--AVDGISLHLQDICPLLYSTDDAICSKANELLQRSRQVQNKIEKERMLRE 898
Query: 899 AFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDAFNDQIDAATRE-- 956
+ K+ DL VC ++ +RFYE VV L L A+ DP G + E
Sbjct: 899 SLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDI 958
Query: 957 ---YALVQRQQCYEIITSALRSLKGDS--SQREFGSPVRPAGPRSALDP--ASRKK---Y 1006
A +R Y+ IT L+ L S + + P +P P + DP S ++ +
Sbjct: 959 VGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHH 1018
Query: 1007 ICQIVQLGVQSPDRIFHEYLYRTMIDXXXXXXXXXXXXPDLVPFLQSAGREPIQEVR 1063
Q+++L +S D +F LY +I P L P L + +VR
Sbjct: 1019 FEQMLKLSQRSKDELFSIALYNWLIQADLADKLLQIASPFLEPHLVRMAKVDQNKVR 1075
Score = 113 (44.8 bits), Expect = 2.2e-77, Sum P(5) = 2.2e-77
Identities = 36/121 (29%), Positives = 58/121 (47%)
Query: 1082 IPSNEAKYFDLLARYYVLKRQHXXXXXXXXXXXXXXSTDEKDAPTLDQRRQYLSNAILQA 1141
+ N+ +Y DLL RYY R ST+ +L QR +Y++ AIL A
Sbjct: 1069 VDQNKVRYMDLLWRYYEKNRSFSNAARVLSKLADMHSTEI----SLQQRLEYIARAILSA 1124
Query: 1142 KNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELE---AIASSLETSVDMSE 1198
K++T S+ A D L LE K+ V R Q +I++ L+ + SS++ ++ +
Sbjct: 1125 KSSTAISSI------AADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAISQLD 1178
Query: 1199 S 1199
S
Sbjct: 1179 S 1179
Score = 99 (39.9 bits), Expect = 2.2e-77, Sum P(5) = 2.2e-77
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 1220 VREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQ 1279
V++ +L +L IT+LY E+A PF+L E L +++ A Y+ D +++ W +I++
Sbjct: 1170 VQDAISQLDSELMDITKLYGEFADPFKLAECKLAIIHCAGYS---DPILVQTLWQDIIEK 1226
Query: 1280 ------ALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEK 1319
LS A S+ + +Y G PLD + LE+
Sbjct: 1227 ELNESVTLSSPDRMHALSLKVVLLGKIYAGTPRFFPLDFIVQFLEQ 1272
Score = 89 (36.4 bits), Expect = 2.2e-77, Sum P(5) = 2.2e-77
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 532 QHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELN--SPRSILEDFFNRFGAGEAAAMC 589
QH+LP ++ V+ S G + RPVD LR L N +E FF +A A C
Sbjct: 492 QHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATC 551
Query: 590 LMLA 593
L+LA
Sbjct: 552 LILA 555
Score = 45 (20.9 bits), Expect = 8.2e-73, Sum P(5) = 8.2e-73
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 435 PPTMSSLIIVSKDPSSQS 452
PP MS+ + VS +P++Q+
Sbjct: 628 PPAMSTPVCVSGNPATQA 645
Score = 40 (19.1 bits), Expect = 4.6e-52, Sum P(5) = 4.6e-52
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 986 GSPVRPAGPRSALDPASRKKYICQIVQLGVQSP 1018
GSPV P+ P + P ++ Q GV P
Sbjct: 598 GSPVYPSSPIPSSSPYPNPSFLGTPSQ-GVHPP 629
Score = 39 (18.8 bits), Expect = 4.1e-64, Sum P(4) = 4.1e-64
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 1138 ILQAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLR 1174
+L A+ N ++ R F N LD + G L L+
Sbjct: 1328 VLLARYVENPSQVLNCERRRFTNLCLDAICGYLVELQ 1364
>UNIPROTKB|D4A0V4 [details] [associations]
symbol:Nup155 "Nuclear pore complex protein Nup155"
species:10116 "Rattus norvegicus" [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0015288 "porin activity" evidence=IEA]
[GO:0017056 "structural constituent of nuclear pore" evidence=IEA]
InterPro:IPR004870 RGD:621199 GO:GO:0005643 GO:GO:0006913
EMBL:CH474048 GO:GO:0006998 GO:GO:0015288 GO:GO:0017056
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 OrthoDB:EOG4VHK5K IPI:IPI00203525
UniGene:Rn.11328 Ensembl:ENSRNOT00000019606 Uniprot:D4A0V4
Length = 1390
Score = 435 (158.2 bits), Expect = 3.9e-77, Sum P(5) = 3.9e-77
Identities = 108/305 (35%), Positives = 171/305 (56%)
Query: 56 PLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCP 115
P + + LP LVE++ + N + G+FP I RAW ++D+ +F+W ++ G
Sbjct: 78 PEISTIRRVPLPPELVEQFGHM--QCNCMMGVFPPISRAWLTIDSDIFMWNYED-GGDLA 134
Query: 116 EYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCS----GAGDGTDPYA 171
+ G + I AVGL K K GIF +++LL+LATPV+++++G+ + G+G D
Sbjct: 135 YFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANVQTGSGILNDSVC 194
Query: 172 E-ISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY-KRCRKVC 229
+ L P P Y++P+D + IT TD GRI LAG+DG +YE+ Y +GW+ +RCRK+
Sbjct: 195 GGLQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKIN 254
Query: 230 HTAGVGNVISRWIVPNV--FRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDG 287
H+ + +S ++VP++ F F DPIV++ DN R +LY R+E+ +QV+ LG +G G
Sbjct: 255 HSK---SSLS-FLVPSLLQFTFSEDDPIVQIEIDNSRNILYTRSEKGVIQVYDLGHDGQG 310
Query: 288 PLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSD 347
+ +VA N G T R+ KP +V I+ + ES L+AV
Sbjct: 311 -MSRVASVSQ--NAIVCAAGNIARTIDRSVF---KP-IVQIAVIENSESLDCQLLAVTHA 363
Query: 348 GRRMY 352
G R+Y
Sbjct: 364 GVRLY 368
Score = 282 (104.3 bits), Expect = 3.9e-77, Sum P(5) = 3.9e-77
Identities = 109/430 (25%), Positives = 182/430 (42%)
Query: 652 EPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLEN---KI 708
E V+SG + G+C+ SR++ +W+ +VV+ S N + SS +Q+LE+ ++
Sbjct: 655 EIVYSGKHNGICIYFSRIMGNIWDAS-LVVERVFKSSNREITAIESSVPIQLLESVLQEL 713
Query: 709 RSLEKFLRCIRNQRRGLYGYVAGMGDLSGSI---LYGTGADSVAGDQSLIRNLFGSYSRN 765
+ L++FL RN + G G + + + L G Q + + L +
Sbjct: 714 KGLQEFLD--RNSQ--FSGGPLGNPNTTAKVQQRLLGVMRPENGNTQQMQQELQRKFHEA 769
Query: 766 ADSNGAGTSNKRQRLPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSE 825
S +Q + S LA +LL +H T +V +++L TF LV +
Sbjct: 770 QLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTVIVGELQKEFQEQLKITTFKDLVIRD 829
Query: 826 EGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAV 885
+ + LI++L+ Y + VD IS L++ CP + D A E L+R+
Sbjct: 830 K--EVTGALIASLINCYIRDNA--AVDGISLHLQDTCPLLYSTDDAVCSKANELLQRSRQ 885
Query: 886 TSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDA 945
E+E + RE+ K+ DL +VC ++ +RFYE VV L L A+ DP G
Sbjct: 886 VQSKSERERMLRESLKEYQKISNQVDLPSVCAQYRQVRFYEGVVELSLTAAEKKDPQGLG 945
Query: 946 FNDQIDAATRE-----YALVQRQQCYEIITSALRSLKGDS--SQREFGSPVRPAGPRSAL 998
+ E +R Y+ IT L+ L S + + P +P P +
Sbjct: 946 LHFYKHGEPEEDVVGLQTFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSS 1005
Query: 999 DP--ASRKK---YICQIVQLGVQSPDRIFHEYLYRTMIDXXXXXXXXXXXXPDLVPFLQS 1053
DP S ++ + Q+++L +S D +F LY +I P L P L
Sbjct: 1006 DPNMLSNEEAGHHFEQMLKLAQRSKDELFSIALYNWLIQADLADKLLQIASPFLEPHLVR 1065
Query: 1054 AGREPIQEVR 1063
+ VR
Sbjct: 1066 MAKVDQNRVR 1075
Score = 113 (44.8 bits), Expect = 3.9e-77, Sum P(5) = 3.9e-77
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 1082 IPSNEAKYFDLLARYYVLKRQHXXXXXXXXXXXXXXSTDEKDAPTLDQRRQYLSNAILQA 1141
+ N +Y DLL RYY R ST+ +L QR +Y++ AIL A
Sbjct: 1069 VDQNRVRYMDLLWRYYEKNRSFSSAARVLSKLADMHSTEI----SLQQRLEYIARAILSA 1124
Query: 1142 KNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELE---AIASSLETSVDMSE 1198
K++T S+ A D L LE K+ V R Q +I++ L+ + SS++ ++ +
Sbjct: 1125 KSSTAISSI------AADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAISQLD 1178
Query: 1199 S 1199
S
Sbjct: 1179 S 1179
Score = 100 (40.3 bits), Expect = 3.9e-77, Sum P(5) = 3.9e-77
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 1220 VREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQ 1279
V++ +L +L IT+LY E+A PF+L E L +++ A Y+ D ++ W +I++
Sbjct: 1170 VQDAISQLDSELMDITKLYGEFADPFKLAECKLAIIHCAGYS---DPILVHTLWQDIIEK 1226
Query: 1280 ------ALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEK 1319
LS A S+ + +Y G PLD + LE+
Sbjct: 1227 ELSDSVTLSSSDRMHALSLKLVLLGKIYAGTPRFFPLDFIVQFLEQ 1272
Score = 93 (37.8 bits), Expect = 3.9e-77, Sum P(5) = 3.9e-77
Identities = 39/129 (30%), Positives = 55/129 (42%)
Query: 532 QHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELN--SPRSILEDFFNRFGAGEAAAMC 589
QH+LP ++ V+ S G + RPVD LR L N +E FF +A A C
Sbjct: 491 QHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATC 550
Query: 590 LMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQ 649
L+LA S V+ A AF R G Q+ L T + G +G +
Sbjct: 551 LILAC----STAACDREVSAWATRAFF--RYGGEAQMRFPATLP-TPSNVGPI-LGSPMY 602
Query: 650 EAEPVFSGA 658
+ PV +G+
Sbjct: 603 SSSPVPTGS 611
Score = 44 (20.5 bits), Expect = 2.7e-30, Sum P(5) = 2.7e-30
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 229 CHTAGVGNVISRWIVPNVFRFG 250
C TA +S W FR+G
Sbjct: 555 CSTAACDREVSAWATRAFFRYG 576
Score = 39 (18.8 bits), Expect = 1.6e-71, Sum P(5) = 1.6e-71
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 433 ASPPTMSSLIIVSKDPSSQS 452
A PPTMS+ + +P+ Q+
Sbjct: 626 AQPPTMSTPMSAVGNPAMQA 645
>UNIPROTKB|F1SN95 [details] [associations]
symbol:NUP155 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0086014 "regulation of atrial cardiac muscle cell
action potential" evidence=IEA] [GO:0006998 "nuclear envelope
organization" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0017056 "structural constituent of nuclear pore"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913 GO:GO:0006998
GO:GO:0017056 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 OMA:SSDRMHA
GeneTree:ENSGT00390000016532 EMBL:CU856294 EMBL:CU928413
Ensembl:ENSSSCT00000018343 Uniprot:F1SN95
Length = 1460
Score = 428 (155.7 bits), Expect = 1.3e-76, Sum P(5) = 1.3e-76
Identities = 108/309 (34%), Positives = 172/309 (55%)
Query: 56 PLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCP 115
P + + LP LVE++ + N + G+FP I RAW ++D+ +F+W ++ G
Sbjct: 137 PEISSIRRVPLPPELVEQFGHM--QCNCMMGVFPPISRAWLTIDSDIFMWNYED-GGDLA 193
Query: 116 EYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCS--------GAGDGT 167
+ G + I AVGL K K GIF +++LL+LATPV+++++G+ + G+G
Sbjct: 194 YFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYTNLQTEKKIGSGVLN 253
Query: 168 DPYAE-ISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY-KRC 225
D + L P P Y++P+D + IT TD GRI LAG+DG +YE+ Y +GW+ +RC
Sbjct: 254 DSMCGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRC 313
Query: 226 RKVCHTAGVGNVISRWIVPNV--FRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGP 283
RK+ H+ + +S ++VP++ F F DPIV++ DN R +LY R+E+ +QV+ LG
Sbjct: 314 RKINHSK---SSLS-FLVPSLLQFTFSEDDPIVQIAVDNSRNILYTRSEKGVIQVYDLGH 369
Query: 284 NGDGPLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVA 343
+G G + +VA N + G T R+ KP +V I+ + ES L+A
Sbjct: 370 DGQG-MNRVASVSQ--NSIVSAAGNIARTIDRSVF---KP-IVQIAVIENSESLDCQLLA 422
Query: 344 VLSDGRRMY 352
V G R+Y
Sbjct: 423 VTHAGVRLY 431
Score = 276 (102.2 bits), Expect = 1.3e-76, Sum P(5) = 1.3e-76
Identities = 113/432 (26%), Positives = 182/432 (42%)
Query: 652 EPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLEN---KI 708
E V+SG + G+C+ SR++ +W+ +VV+ S N + SS Q+LE+ ++
Sbjct: 722 EIVYSGKHNGICIYFSRIMGNIWDAS-LVVERVFKSGNREITAIESSVPSQLLESVLQEL 780
Query: 709 RSLEKFLRCIRNQRRGLYGYVAGMGDLSGSI---LYGTGADSVAGDQSLIRNLFGSYSR- 764
+ L++FL RN + G G + + L G Q + + L +
Sbjct: 781 KGLQEFLD--RNSQ--FAGGPLGNPSTTAKVQQRLIGFMRPENGNTQQMQQELQRKFHEL 836
Query: 765 NAD-SNGAGTSNKRQRLPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVC 823
A S +Q + S LA LL +H T +V +++L TF LV
Sbjct: 837 EAQLSEKVSLQAIQQLVRKSYQALALWRLLCEHQFTVIVGELQKEFQEQLKITTFKDLVI 896
Query: 824 SEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERA 883
++ L LI++L+ Y + VD IS L++ CP + D A E L+R+
Sbjct: 897 RDK--ELTGALIASLINCYIRDNA--AVDGISLHLQDICPLLYSTDDAVCSKANELLQRS 952
Query: 884 AVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAG 943
+ EKE + RE+ K+ DL VC ++ +RFYE VV L L A+ DP G
Sbjct: 953 RQVQNKVEKEKMLRESLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQG 1012
Query: 944 DAFNDQIDAATRE-----YALVQRQQCYEIITSALRSLKGDS--SQREFGSPVRPAGPRS 996
+ E A +R Y+ IT L+ L S + + P +P P
Sbjct: 1013 LGLHFYKHGEPEEDIVGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVL 1072
Query: 997 ALDP--ASRKK---YICQIVQLGVQSPDRIFHEYLYRTMIDXXXXXXXXXXXXPDLVPFL 1051
+ DP S ++ + Q+++L +S D +F LY +I P L P L
Sbjct: 1073 SSDPNMLSNEEAGHHFEQMLKLSQRSKDELFSIALYNWLIQADLADKLLQIASPFLEPHL 1132
Query: 1052 QSAGREPIQEVR 1063
+ +VR
Sbjct: 1133 VRMAKVDQNKVR 1144
Score = 113 (44.8 bits), Expect = 1.3e-76, Sum P(5) = 1.3e-76
Identities = 36/121 (29%), Positives = 58/121 (47%)
Query: 1082 IPSNEAKYFDLLARYYVLKRQHXXXXXXXXXXXXXXSTDEKDAPTLDQRRQYLSNAILQA 1141
+ N+ +Y DLL RYY R ST+ +L QR +Y++ AIL A
Sbjct: 1138 VDQNKVRYMDLLWRYYEKNRSFSNAARVLSKLADMHSTEI----SLQQRLEYIARAILSA 1193
Query: 1142 KNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELE---AIASSLETSVDMSE 1198
K++T S+ A D L LE K+ V R Q +I++ L+ + SS++ ++ +
Sbjct: 1194 KSSTAISSI------AADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAISQLD 1247
Query: 1199 S 1199
S
Sbjct: 1248 S 1248
Score = 105 (42.0 bits), Expect = 1.3e-76, Sum P(5) = 1.3e-76
Identities = 42/129 (32%), Positives = 56/129 (43%)
Query: 532 QHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELN--SPRSILEDFFNRFGAGEAAAMC 589
QH+LP ++ V+ S G + RPVD LR L N +E FF +A A C
Sbjct: 554 QHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATC 613
Query: 590 LMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQ 649
L+LA S V+ A AF R G Q+ AL T + G +G V
Sbjct: 614 LILAC----STAACDREVSAWATRAFF--RYGGEAQMRFPTALP-TPSNVGPI-LGSPVY 665
Query: 650 EAEPVFSGA 658
+ PV SG+
Sbjct: 666 SSSPVPSGS 674
Score = 98 (39.6 bits), Expect = 1.3e-76, Sum P(5) = 1.3e-76
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 1220 VREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQ 1279
V++ +L +L IT+LY E+A PF+L E L +++ A Y+ D +++ W +I++
Sbjct: 1239 VQDAISQLDSELMDITKLYGEFADPFKLAECKLAIIHCAGYS---DPILVQTLWQDIIEK 1295
Query: 1280 ------ALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEK 1319
LS A S+ + +Y G PLD + LE+
Sbjct: 1296 ELNESVTLSSPDRMHALSLKIVLLGKIYAGTPRFFPLDFIVQFLEQ 1341
Score = 44 (20.5 bits), Expect = 3.3e-29, Sum P(5) = 3.3e-29
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 229 CHTAGVGNVISRWIVPNVFRFG 250
C TA +S W FR+G
Sbjct: 618 CSTAACDREVSAWATRAFFRYG 639
Score = 38 (18.4 bits), Expect = 1.2e-69, Sum P(5) = 1.2e-69
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 435 PPTMSSLIIVSKDPSSQSYPTGSLGTSARI 464
PP MS+ + +P++ P+ S T I
Sbjct: 694 PPAMSTPVCTVGNPAAPPAPSMSCMTGPEI 723
>RGD|621199 [details] [associations]
symbol:Nup155 "nucleoporin 155" species:10116 "Rattus norvegicus"
[GO:0005635 "nuclear envelope" evidence=ISO] [GO:0005643 "nuclear
pore" evidence=IEA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO] [GO:0006606 "protein import into nucleus"
evidence=IEA;ISO] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0006998 "nuclear envelope organization"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0017056 "structural constituent of nuclear pore" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0086014 "regulation of atrial cardiac
muscle cell action potential" evidence=IEA;ISO] InterPro:IPR004870
RGD:621199 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0006913
GO:GO:0051028 GO:GO:0017056 eggNOG:COG5308 KO:K14312
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 CTD:9631 HOGENOM:HOG000043927
HOVERGEN:HBG052680 EMBL:Z21780 IPI:IPI00203525 PIR:A45455
RefSeq:NP_446404.1 UniGene:Rn.11328 STRING:P37199
PhosphoSite:P37199 PRIDE:P37199 GeneID:117021 KEGG:rno:117021
NextBio:619775 ArrayExpress:P37199 Genevestigator:P37199
GermOnline:ENSRNOG00000013411 Uniprot:P37199
Length = 1390
Score = 421 (153.3 bits), Expect = 6.9e-76, Sum P(5) = 6.9e-76
Identities = 121/370 (32%), Positives = 194/370 (52%)
Query: 2 SSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYT-----THPREWPP 56
S+ L + NAG ++ DR +E D+ E L S S + +P + P
Sbjct: 12 STSAPSLQEALENAGRLI-DRQLQEDRMYPDLSELLMVSAPNSPTVSGMSDMDYPLQGPG 70
Query: 57 LVEVVDTWDLPTVL-----VERYNAAGG-EGNALCGIFPEIRRAWASVDNSLFLWRFDKW 110
L+ V ++ T+ + N+ A+ G+FP I RAW ++D+ +F+W ++
Sbjct: 71 LLSVPSLPEISTIRRVPLRLSWLNSLDTCSVTAMMGVFPPISRAWLTIDSDIFMWNYED- 129
Query: 111 DGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCS----GAGDG 166
G + G + I AVGL K K GIF +++LL+LATPV+++++G+ + G+G
Sbjct: 130 GGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANVQTGSGIL 189
Query: 167 TDPYAE-ISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY-KR 224
D + L P P Y++P+D + IT TD GRI LAG+DG +YE+ Y +GW+ +R
Sbjct: 190 NDSVCGGLQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQR 249
Query: 225 CRKVCHTAGVGNVISRWIVPNV--FRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLG 282
CRK+ H+ + +S ++VP++ F F DPIV++ DN R +LY R+E+ +QV+ LG
Sbjct: 250 CRKINHSK---SSLS-FLVPSLLQFTFSEDDPIVQIEIDNSRNILYTRSEKGVIQVYDLG 305
Query: 283 PNGDGPLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLV 342
+G G + +VA N G T R+ KP +V I+ + ES L+
Sbjct: 306 HDGQG-MSRVASVSQ--NAIVCAAGNIARTIDRSVF---KP-IVQIAVIENSESLDCQLL 358
Query: 343 AVLSDGRRMY 352
AV G R+Y
Sbjct: 359 AVTHAGVRLY 368
Score = 285 (105.4 bits), Expect = 6.9e-76, Sum P(5) = 6.9e-76
Identities = 110/430 (25%), Positives = 182/430 (42%)
Query: 652 EPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLEN---KI 708
E V+SG + G+C+ SR++ +W+ +VV+ S N + SS +Q+LE+ ++
Sbjct: 655 EIVYSGKHNGICIYFSRIMGNIWDAS-LVVERVFKSSNREITAIESSVPIQLLESVLQEL 713
Query: 709 RSLEKFLRCIRNQRRGLYGYVAGMGDLSGSI---LYGTGADSVAGDQSLIRNLFGSYSRN 765
+ L++FL RN + G G + + + L G Q + + L +
Sbjct: 714 KGLQEFLD--RNSQ--FSGGPLGNPNTTAKVQQRLLGVMRPENGNTQQMQQELQRKFHEA 769
Query: 766 ADSNGAGTSNKRQRLPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSE 825
S +Q + S LA +LL +H T +V +++L TF LV E
Sbjct: 770 QLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTVIVGELQKEFQEQLKITTFKDLVIRE 829
Query: 826 EGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAV 885
+ + LI++L+ Y + VD IS L++ CP + D A E L+R+
Sbjct: 830 K--EVTGALIASLINCYIRDNA--AVDGISLHLQDTCPLLYSTDDAVCSKANELLQRSRQ 885
Query: 886 TSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDA 945
E+E + RE+ K+ DL +VC ++ +RFYE VV L L A+ DP G
Sbjct: 886 VQSKSERERMLRESLKEYQKISNQVDLPSVCAQYRQVRFYEGVVELSLTAAEKKDPQGLG 945
Query: 946 FNDQIDAATRE-----YALVQRQQCYEIITSALRSLKGDS--SQREFGSPVRPAGPRSAL 998
+ E +R Y+ IT L+ L S + + P +P P +
Sbjct: 946 LHFYKHGEPEEDVVGLQTFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSS 1005
Query: 999 DP--ASRKK---YICQIVQLGVQSPDRIFHEYLYRTMIDXXXXXXXXXXXXPDLVPFLQS 1053
DP S ++ + Q+++L +S D +F LY +I P L P L
Sbjct: 1006 DPNMLSNEEAGHHFEQMLKLAQRSKDELFSIALYNWLIQADLADKLLQIASPFLEPHLVR 1065
Query: 1054 AGREPIQEVR 1063
+ VR
Sbjct: 1066 MAKVDQNRVR 1075
Score = 113 (44.8 bits), Expect = 6.9e-76, Sum P(5) = 6.9e-76
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 1082 IPSNEAKYFDLLARYYVLKRQHXXXXXXXXXXXXXXSTDEKDAPTLDQRRQYLSNAILQA 1141
+ N +Y DLL RYY R ST+ +L QR +Y++ AIL A
Sbjct: 1069 VDQNRVRYMDLLWRYYEKNRSFSSAARVLSKLADMHSTEI----SLQQRLEYIARAILSA 1124
Query: 1142 KNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELE---AIASSLETSVDMSE 1198
K++T S+ A D L LE K+ V R Q +I++ L+ + SS++ ++ +
Sbjct: 1125 KSSTAISSI------AADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAISQLD 1178
Query: 1199 S 1199
S
Sbjct: 1179 S 1179
Score = 100 (40.3 bits), Expect = 6.9e-76, Sum P(5) = 6.9e-76
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 1220 VREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQ 1279
V++ +L +L IT+LY E+A PF+L E L +++ A Y+ D ++ W +I++
Sbjct: 1170 VQDAISQLDSELMDITKLYGEFADPFKLAECKLAIIHCAGYS---DPILVHTLWQDIIEK 1226
Query: 1280 ------ALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEK 1319
LS A S+ + +Y G PLD + LE+
Sbjct: 1227 ELSDSVTLSSSDRMHALSLKLVLLGKIYAGTPRFFPLDFIVQFLEQ 1272
Score = 93 (37.8 bits), Expect = 6.9e-76, Sum P(5) = 6.9e-76
Identities = 39/129 (30%), Positives = 55/129 (42%)
Query: 532 QHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELN--SPRSILEDFFNRFGAGEAAAMC 589
QH+LP ++ V+ S G + RPVD LR L N +E FF +A A C
Sbjct: 491 QHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATC 550
Query: 590 LMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQ 649
L+LA S V+ A AF R G Q+ L T + G +G +
Sbjct: 551 LILAC----STAACDREVSAWATRAFF--RYGGEAQMRFPATLP-TPSNVGPI-LGSPMY 602
Query: 650 EAEPVFSGA 658
+ PV +G+
Sbjct: 603 SSSPVPTGS 611
Score = 44 (20.5 bits), Expect = 1.3e-30, Sum P(5) = 1.3e-30
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 229 CHTAGVGNVISRWIVPNVFRFG 250
C TA +S W FR+G
Sbjct: 555 CSTAACDREVSAWATRAFFRYG 576
Score = 39 (18.8 bits), Expect = 2.8e-70, Sum P(5) = 2.8e-70
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 433 ASPPTMSSLIIVSKDPSSQS 452
A PPTMS+ + +P+ Q+
Sbjct: 626 AQPPTMSTPMSAVGNPAMQA 645
>UNIPROTKB|P37199 [details] [associations]
symbol:Nup155 "Nuclear pore complex protein Nup155"
species:10116 "Rattus norvegicus" [GO:0017056 "structural
constituent of nuclear pore" evidence=IEA] InterPro:IPR004870
RGD:621199 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0006913
GO:GO:0051028 GO:GO:0017056 eggNOG:COG5308 KO:K14312
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 CTD:9631 HOGENOM:HOG000043927
HOVERGEN:HBG052680 EMBL:Z21780 IPI:IPI00203525 PIR:A45455
RefSeq:NP_446404.1 UniGene:Rn.11328 STRING:P37199
PhosphoSite:P37199 PRIDE:P37199 GeneID:117021 KEGG:rno:117021
NextBio:619775 ArrayExpress:P37199 Genevestigator:P37199
GermOnline:ENSRNOG00000013411 Uniprot:P37199
Length = 1390
Score = 421 (153.3 bits), Expect = 6.9e-76, Sum P(5) = 6.9e-76
Identities = 121/370 (32%), Positives = 194/370 (52%)
Query: 2 SSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYT-----THPREWPP 56
S+ L + NAG ++ DR +E D+ E L S S + +P + P
Sbjct: 12 STSAPSLQEALENAGRLI-DRQLQEDRMYPDLSELLMVSAPNSPTVSGMSDMDYPLQGPG 70
Query: 57 LVEVVDTWDLPTVL-----VERYNAAGG-EGNALCGIFPEIRRAWASVDNSLFLWRFDKW 110
L+ V ++ T+ + N+ A+ G+FP I RAW ++D+ +F+W ++
Sbjct: 71 LLSVPSLPEISTIRRVPLRLSWLNSLDTCSVTAMMGVFPPISRAWLTIDSDIFMWNYED- 129
Query: 111 DGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCS----GAGDG 166
G + G + I AVGL K K GIF +++LL+LATPV+++++G+ + G+G
Sbjct: 130 GGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANVQTGSGIL 189
Query: 167 TDPYAE-ISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY-KR 224
D + L P P Y++P+D + IT TD GRI LAG+DG +YE+ Y +GW+ +R
Sbjct: 190 NDSVCGGLQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQR 249
Query: 225 CRKVCHTAGVGNVISRWIVPNV--FRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLG 282
CRK+ H+ + +S ++VP++ F F DPIV++ DN R +LY R+E+ +QV+ LG
Sbjct: 250 CRKINHSK---SSLS-FLVPSLLQFTFSEDDPIVQIEIDNSRNILYTRSEKGVIQVYDLG 305
Query: 283 PNGDGPLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLV 342
+G G + +VA N G T R+ KP +V I+ + ES L+
Sbjct: 306 HDGQG-MSRVASVSQ--NAIVCAAGNIARTIDRSVF---KP-IVQIAVIENSESLDCQLL 358
Query: 343 AVLSDGRRMY 352
AV G R+Y
Sbjct: 359 AVTHAGVRLY 368
Score = 285 (105.4 bits), Expect = 6.9e-76, Sum P(5) = 6.9e-76
Identities = 110/430 (25%), Positives = 182/430 (42%)
Query: 652 EPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLEN---KI 708
E V+SG + G+C+ SR++ +W+ +VV+ S N + SS +Q+LE+ ++
Sbjct: 655 EIVYSGKHNGICIYFSRIMGNIWDAS-LVVERVFKSSNREITAIESSVPIQLLESVLQEL 713
Query: 709 RSLEKFLRCIRNQRRGLYGYVAGMGDLSGSI---LYGTGADSVAGDQSLIRNLFGSYSRN 765
+ L++FL RN + G G + + + L G Q + + L +
Sbjct: 714 KGLQEFLD--RNSQ--FSGGPLGNPNTTAKVQQRLLGVMRPENGNTQQMQQELQRKFHEA 769
Query: 766 ADSNGAGTSNKRQRLPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSE 825
S +Q + S LA +LL +H T +V +++L TF LV E
Sbjct: 770 QLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTVIVGELQKEFQEQLKITTFKDLVIRE 829
Query: 826 EGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAV 885
+ + LI++L+ Y + VD IS L++ CP + D A E L+R+
Sbjct: 830 K--EVTGALIASLINCYIRDNA--AVDGISLHLQDTCPLLYSTDDAVCSKANELLQRSRQ 885
Query: 886 TSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDA 945
E+E + RE+ K+ DL +VC ++ +RFYE VV L L A+ DP G
Sbjct: 886 VQSKSERERMLRESLKEYQKISNQVDLPSVCAQYRQVRFYEGVVELSLTAAEKKDPQGLG 945
Query: 946 FNDQIDAATRE-----YALVQRQQCYEIITSALRSLKGDS--SQREFGSPVRPAGPRSAL 998
+ E +R Y+ IT L+ L S + + P +P P +
Sbjct: 946 LHFYKHGEPEEDVVGLQTFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSS 1005
Query: 999 DP--ASRKK---YICQIVQLGVQSPDRIFHEYLYRTMIDXXXXXXXXXXXXPDLVPFLQS 1053
DP S ++ + Q+++L +S D +F LY +I P L P L
Sbjct: 1006 DPNMLSNEEAGHHFEQMLKLAQRSKDELFSIALYNWLIQADLADKLLQIASPFLEPHLVR 1065
Query: 1054 AGREPIQEVR 1063
+ VR
Sbjct: 1066 MAKVDQNRVR 1075
Score = 113 (44.8 bits), Expect = 6.9e-76, Sum P(5) = 6.9e-76
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 1082 IPSNEAKYFDLLARYYVLKRQHXXXXXXXXXXXXXXSTDEKDAPTLDQRRQYLSNAILQA 1141
+ N +Y DLL RYY R ST+ +L QR +Y++ AIL A
Sbjct: 1069 VDQNRVRYMDLLWRYYEKNRSFSSAARVLSKLADMHSTEI----SLQQRLEYIARAILSA 1124
Query: 1142 KNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELE---AIASSLETSVDMSE 1198
K++T S+ A D L LE K+ V R Q +I++ L+ + SS++ ++ +
Sbjct: 1125 KSSTAISSI------AADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAISQLD 1178
Query: 1199 S 1199
S
Sbjct: 1179 S 1179
Score = 100 (40.3 bits), Expect = 6.9e-76, Sum P(5) = 6.9e-76
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 1220 VREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQ 1279
V++ +L +L IT+LY E+A PF+L E L +++ A Y+ D ++ W +I++
Sbjct: 1170 VQDAISQLDSELMDITKLYGEFADPFKLAECKLAIIHCAGYS---DPILVHTLWQDIIEK 1226
Query: 1280 ------ALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEK 1319
LS A S+ + +Y G PLD + LE+
Sbjct: 1227 ELSDSVTLSSSDRMHALSLKLVLLGKIYAGTPRFFPLDFIVQFLEQ 1272
Score = 93 (37.8 bits), Expect = 6.9e-76, Sum P(5) = 6.9e-76
Identities = 39/129 (30%), Positives = 55/129 (42%)
Query: 532 QHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELN--SPRSILEDFFNRFGAGEAAAMC 589
QH+LP ++ V+ S G + RPVD LR L N +E FF +A A C
Sbjct: 491 QHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATC 550
Query: 590 LMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQ 649
L+LA S V+ A AF R G Q+ L T + G +G +
Sbjct: 551 LILAC----STAACDREVSAWATRAFF--RYGGEAQMRFPATLP-TPSNVGPI-LGSPMY 602
Query: 650 EAEPVFSGA 658
+ PV +G+
Sbjct: 603 SSSPVPTGS 611
Score = 44 (20.5 bits), Expect = 1.3e-30, Sum P(5) = 1.3e-30
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 229 CHTAGVGNVISRWIVPNVFRFG 250
C TA +S W FR+G
Sbjct: 555 CSTAACDREVSAWATRAFFRYG 576
Score = 39 (18.8 bits), Expect = 2.8e-70, Sum P(5) = 2.8e-70
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 433 ASPPTMSSLIIVSKDPSSQS 452
A PPTMS+ + +P+ Q+
Sbjct: 626 AQPPTMSTPMSAVGNPAMQA 645
>UNIPROTKB|E9PF10 [details] [associations]
symbol:NUP155 "Nuclear pore complex protein Nup155"
species:9606 "Homo sapiens" [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0017056 "structural constituent of nuclear pore"
evidence=IEA] InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913
EMBL:AC025449 GO:GO:0017056 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 HGNC:HGNC:8063
EMBL:AC008832 EMBL:AC117532 IPI:IPI00965680
ProteinModelPortal:E9PF10 Ensembl:ENST00000513532 UCSC:uc010iuz.1
ArrayExpress:E9PF10 Bgee:E9PF10 Uniprot:E9PF10
Length = 1327
Score = 437 (158.9 bits), Expect = 5.0e-71, Sum P(6) = 5.0e-71
Identities = 123/373 (32%), Positives = 201/373 (53%)
Query: 2 SSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTT------HPREWP 55
S+ L + NAG ++ DR +E D+ E L S ++P + +P + P
Sbjct: 13 STSAAALQEALENAGRLI-DRQLQEDRMYPDLSELLMVSA-PNNPTVSGMSDMDYPLQGP 70
Query: 56 PLVEVVDTWD--------LPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRF 107
L+ V + + LP LVE++ + N + G+FP I RAW ++D+ +F+W +
Sbjct: 71 GLLSVPNLPEISSIRRVPLPPELVEQFGHM--QCNCMMGVFPPISRAWLTIDSDIFMWNY 128
Query: 108 DKWDGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCS----GA 163
+ G + G + I AVGL K K GIF +++LL+LATPV+++++G+ + G+
Sbjct: 129 ED-GGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGS 187
Query: 164 GDGTDPYAE-ISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY 222
G D + + L P P Y++P+D + IT TD GRI LAG+DG +YE+ Y +GW+
Sbjct: 188 GVLNDSLSGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWF 247
Query: 223 -KRCRKVCHTAGVGNVISRWIVPNV--FRFGAVDPIVELVFDNERQLLYARTEEMKLQVF 279
+RCRK+ H+ + +S ++VP++ F F DPI+++ DN R +LY R+E+ +QV+
Sbjct: 248 SQRCRKINHSK---SSLS-FLVPSLLQFTFSEDDPILQIAIDNSRNILYTRSEKGVIQVY 303
Query: 280 VLGPNGDGPLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWL 339
LG +G G + +VA N + G T R+ KP +V I+ + ES
Sbjct: 304 DLGQDGQG-MSRVASVSQ--NAIVSAAGNIARTIDRSVF---KP-IVQIAVIENSESLDC 356
Query: 340 HLVAVLSDGRRMY 352
L+AV G R+Y
Sbjct: 357 QLLAVTHAGVRLY 369
Score = 168 (64.2 bits), Expect = 5.0e-71, Sum P(6) = 5.0e-71
Identities = 55/200 (27%), Positives = 83/200 (41%)
Query: 876 AVECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQK 935
A E L+R+ + EKE + RE+ K+ DL VC ++ +RFYE VV L L
Sbjct: 813 ANELLQRSRQVQNKTEKERMLRESLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTA 872
Query: 936 AQALDPAGDAFNDQIDAATRE-----YALVQRQQCYEIITSALRSLKGDS--SQREFGSP 988
A+ DP G + E A +R Y+ IT L+ L S + + P
Sbjct: 873 AEKKDPQGLGLHFYKHGEPEEDIVGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVP 932
Query: 989 VRPAGPRSALDP--ASRKK---YICQIVQLGVQSPDRIFHEYLYRTMIDXXXXXXXXXXX 1043
+P P + DP S ++ + Q+++L +S D +F LY +I
Sbjct: 933 KKPGPPVLSSDPNMLSNEEAGHHFEQMLKLSQRSKDELFSIALYNWLIQVDLADKLLQVA 992
Query: 1044 XPDLVPFLQSAGREPIQEVR 1063
P L P L + VR
Sbjct: 993 SPFLEPHLVRMAKVDQNRVR 1012
Score = 113 (44.8 bits), Expect = 5.0e-71, Sum P(6) = 5.0e-71
Identities = 37/121 (30%), Positives = 57/121 (47%)
Query: 1082 IPSNEAKYFDLLARYYVLKRQHXXXXXXXXXXXXXXSTDEKDAPTLDQRRQYLSNAILQA 1141
+ N +Y DLL RYY R ST+ +L QR +Y++ AIL A
Sbjct: 1006 VDQNRVRYMDLLWRYYEKNRSFSNAARVLSRLADMHSTEI----SLQQRLEYIARAILSA 1061
Query: 1142 KNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELE---AIASSLETSVDMSE 1198
K++T S+ A D L LE K+ V R Q +I++ L+ + SS++ +V +
Sbjct: 1062 KSSTAISSI------AADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLD 1115
Query: 1199 S 1199
S
Sbjct: 1116 S 1116
Score = 101 (40.6 bits), Expect = 5.0e-71, Sum P(6) = 5.0e-71
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 1220 VREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQ 1279
V++ +L +L IT+LY E+A PF+L E L +++ A Y+ D +++ W +I++
Sbjct: 1107 VQDAVSQLDSELMDITKLYGEFADPFKLAECKLAIIHCAGYS---DPILVQTLWQDIIEK 1163
Query: 1280 ------ALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEK 1319
LS A S+ + +Y G PLD + LE+
Sbjct: 1164 ELSDSVTLSSSDRMHALSLKIVLLGKIYAGTPRFFPLDFIVQFLEQ 1209
Score = 98 (39.6 bits), Expect = 5.0e-71, Sum P(6) = 5.0e-71
Identities = 40/129 (31%), Positives = 53/129 (41%)
Query: 532 QHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELN--SPRSILEDFFNRFGAGEAAAMC 589
QH+LP ++ V+ S G + RPVD LR L N +E FF +A A C
Sbjct: 492 QHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATC 551
Query: 590 LMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQ 649
L+LA S V+ A AF R G Q+ L G +G V
Sbjct: 552 LILAC----STAACDREVSAWATRAFF--RYGGEAQMRFPTTLPPPSNV--GPILGSPVY 603
Query: 650 EAEPVFSGA 658
+ PV SG+
Sbjct: 604 SSSPVPSGS 612
Score = 89 (36.4 bits), Expect = 5.0e-71, Sum P(6) = 5.0e-71
Identities = 56/217 (25%), Positives = 93/217 (42%)
Query: 631 ALANTRTAAGGFSMGQVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENG 690
AL N T A S V E V+SG + G+C+ SR++ +W+ +VV+ S N
Sbjct: 638 ALGNPATQATNMSC---VTGPEIVYSGKHNGICIYFSRIMGNIWDAS-LVVERIFKSGNR 693
Query: 691 VVVCRLSSGAMQVLEN---KIRSLEKFLRCIRNQRRGLYGYVAGMGDLSGSI---LYGTG 744
+ SS Q+LE+ +++ L++FL RN + G G + + + L G
Sbjct: 694 EITAIESSVPCQLLESVLQELKGLQEFLD--RNSQ--FAGGPLGNPNTTAKVQQRLIGFM 749
Query: 745 ADSVAGDQSLIRNLFGSYSRNADSNGAGTSNKRQRLPYSPAELAAIELLSQHHVTRLVQG 804
Q + + L + S +Q + S LA +LL +H T +V
Sbjct: 750 RPENGNPQQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVA- 808
Query: 805 FDANLRQELVQLTFCQLVCSEEGDRLATRLISALMEY 841
+ EL+Q + Q+ E +R+ L +L EY
Sbjct: 809 -ELQKANELLQRSR-QVQNKTEKERM---LRESLKEY 840
Score = 44 (20.5 bits), Expect = 2.0e-23, Sum P(5) = 2.0e-23
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 229 CHTAGVGNVISRWIVPNVFRFG 250
C TA +S W FR+G
Sbjct: 556 CSTAACDREVSAWATRAFFRYG 577
>ZFIN|ZDB-GENE-040426-711 [details] [associations]
symbol:nup155 "nucleoporin 155" species:7955 "Danio
rerio" [GO:0005643 "nuclear pore" evidence=IEA;IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0017056 "structural
constituent of nuclear pore" evidence=IEA] InterPro:IPR004870
ZFIN:ZDB-GENE-040426-711 GO:GO:0005643 GO:GO:0006913 GO:GO:0017056
eggNOG:COG5308 KO:K14312 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 CTD:9631
HOGENOM:HOG000043927 HOVERGEN:HBG052680 OrthoDB:EOG4VHK5K
EMBL:BC045339 IPI:IPI00500451 RefSeq:NP_956450.1 UniGene:Dr.14749
STRING:Q7ZW07 PRIDE:Q7ZW07 GeneID:393125 KEGG:dre:393125
InParanoid:Q7ZW07 NextBio:20814197 ArrayExpress:Q7ZW07 Bgee:Q7ZW07
Uniprot:Q7ZW07
Length = 1391
Score = 455 (165.2 bits), Expect = 1.4e-68, Sum P(4) = 1.4e-68
Identities = 109/295 (36%), Positives = 167/295 (56%)
Query: 66 LPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEY-TGEEQVI 124
LP LVE++ + N + G+FPEI RAW ++DN +F+W ++ DG Y G + I
Sbjct: 84 LPPELVEQFGHM--QCNCMMGVFPEISRAWLTIDNDVFMWNYE--DGSDVAYFDGLSETI 139
Query: 125 CAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCC----SGAGDGTDPYAEISLQPLPE 180
+VGL K KPGIF I +LL+LATPV+++++G+ +G D T + L P P
Sbjct: 140 LSVGLVKPKPGIFQPHIHFLLVLATPVDVVILGLSFPKVQTGLNDST--CGAMQLLPDPL 197
Query: 181 YTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY-KRCRKVCHTAGVGNVIS 239
YT+P+D + IT TD GRI +AG+DG +YE+ Y +GW+ +RCRK+ H+ + +S
Sbjct: 198 YTIPTDNTYLLAITSTDTGRIFMAGKDGCLYEVAYQAEAGWFSQRCRKINHSK---SSLS 254
Query: 240 RWIVPNV--FRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERN 297
+++P++ F F DP+V++ DN R +LY R+E+ LQV+ LG +G G + +VA
Sbjct: 255 -FLIPSLLQFSFSEDDPVVQIAVDNSRNILYTRSEKGVLQVYDLGADGQG-MSRVAA--- 309
Query: 298 LFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMY 352
+Q R RS +V I+ + ES L+AV G R+Y
Sbjct: 310 -ISQSSIVSAAGNIA--RTIDRSVFKPIVQIAVIDRSESSDCQLLAVTHAGVRLY 361
Score = 248 (92.4 bits), Expect = 1.4e-68, Sum P(4) = 1.4e-68
Identities = 102/450 (22%), Positives = 187/450 (41%)
Query: 635 TRTAAGGFSMGQVVQEAEPVFSGAYEGLCLCASRLLFPLWE--LPVMVVKGDAISENGVV 692
T + GG + V E VFSG + G+ + +R+L +W+ L + ++
Sbjct: 636 TPMSPGGAPITAVSSGPEVVFSGKHNGISIYFTRILGNIWDGSLAMETPINKGTQTVMIL 695
Query: 693 VCRLSSGAMQVLENKIRSLEKFLRCIRNQR-----RGLYGYVAGMGDLSGSILYGTGADS 747
SS ++++ +++ L++FL +N + G+ + + +L +L D
Sbjct: 696 ESTASSSDLELVLMQLQDLKEFLD--KNSQFSPTSLGVANF-SSPANLQQRLLGFMRPDG 752
Query: 748 VAGDQSLIRNLFGSYSRNADSNGAGTSNKRQRLPYSPAELAAI-ELLSQHHVTRLVQGFD 806
+ Q + + L Y A + + Q+L + + A+ +LL H + ++
Sbjct: 753 -SSSQQMQQELQRKYHTEAQAYEKASLQAMQQLIHRSCQTLALWKLLCDHQFSLILSEMP 811
Query: 807 ANLRQELVQLTFCQLV-CSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSY 865
+ ++ ++F +V C E L+ LI+AL+ Y +VD +S LR+ CP
Sbjct: 812 KEFQDQMKAVSFKDVVVCGRE---LSGALITALINVYIKDSA--SVDTLSAHLRDICPLL 866
Query: 866 FKESDYKFFLAVECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFY 925
+ D A E L+ + EKE +E+ ++ + DL VC ++ +RFY
Sbjct: 867 YSSDDSICSKANELLQSSRQIQSKLEKERTLKESLRLYQQISHNTDLPLVCSQYRQVRFY 926
Query: 926 EAVVRLPLQKAQALDPA--GDAF---NDQIDAATREYALVQRQQCYEIITSALRSLKGDS 980
E V+ L L A D G F + + A+ + A +R CY+ IT ++ L S
Sbjct: 927 EGVMELCLTAADKKDHQRLGLHFYRNGEPEEDASGQQAFQERLLCYKCITDTMQELVNQS 986
Query: 981 --SQREFGSPVRPAGPRSALDP-----ASRKKYICQIVQLGVQSPDRIFHEYLYRTMIDX 1033
+ + P +P P DP + Q++ L +S D +FH LY +I
Sbjct: 987 KAAPQSPSVPKQPGPPVMTSDPNMLGNEDAAAHFEQMLGLAQRSQDELFHIALYNWLIQA 1046
Query: 1034 XXXXXXXXXXXPDLVPFLQSAGREPIQEVR 1063
P L L ++ +VR
Sbjct: 1047 DLTDKLLEVNSPYLEDHLMHMIKQDQSKVR 1076
Score = 100 (40.3 bits), Expect = 1.4e-68, Sum P(4) = 1.4e-68
Identities = 33/99 (33%), Positives = 49/99 (49%)
Query: 1085 NEAKYFDLLARYYVLKRQHXXXXXXXXXXXXXXSTDEKDAPTLDQRRQYLSNAILQAKNA 1144
++ + DLL RYY R ST+ +L QR +Y+S AIL AK++
Sbjct: 1073 SKVRNMDLLWRYYEKNRSFGKAAHVLARLADMHSTEI----SLKQRLEYISRAILSAKSS 1128
Query: 1145 TNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDEL 1183
++ SL GA D L LE K+ V+R Q +I++ L
Sbjct: 1129 SSVSSL-----GA-DGEFLHELEEKMEVVRIQVQIQETL 1161
Score = 91 (37.1 bits), Expect = 1.4e-68, Sum P(4) = 1.4e-68
Identities = 27/100 (27%), Positives = 46/100 (46%)
Query: 1226 ELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGG 1285
+L +L IT+LY E+A F L E L +++ A G +D ++ W +I++ L+
Sbjct: 1177 QLDSELMDITKLYGEFADHFRLSECKLAIIHCA---GHSDPILVHSLWQEIIEKELNDSV 1233
Query: 1286 IAEACSVLKRVG------SHMYPGDGAVLPLDTLCLHLEK 1319
+ ++ V +Y G PLD L LE+
Sbjct: 1234 VMSPSDRMRAVSLKLVSLGKVYAGTPRYFPLDFLVKFLEQ 1273
Score = 77 (32.2 bits), Expect = 8.5e-51, Sum P(4) = 8.5e-51
Identities = 51/197 (25%), Positives = 75/197 (38%)
Query: 532 QHILPRRRIVVFSTMGMMEVVFN--RPVDILRRLF--ELNSPRSILEDFFNRFGAGEAAA 587
QH +P ++ V+ S G +F+ RPVD LR L +E FF +A A
Sbjct: 489 QHNVPPQKFVLLSAQGSH--IFHKLRPVDQLRHLLVSSAGGESEEIERFFKLHREEQACA 546
Query: 588 MCLMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSM--- 644
L+LA S V+ A AF R G Q+ +AL+ FS
Sbjct: 547 TALILAC----SNAACDREVSVWATRAFF--RYGGEAQMRFPSALSAPSNVGPLFSSPVP 600
Query: 645 GQVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVL 704
G + P+ + ++ L A + P P V +S G + +SSG V
Sbjct: 601 GSPMPIGSPLPNPSF--LATPAPGMFPPNVSTPY--VPATPMSPGGAPITAVSSGPEVVF 656
Query: 705 ENKIRSLE-KFLRCIRN 720
K + F R + N
Sbjct: 657 SGKHNGISIYFTRILGN 673
Score = 47 (21.6 bits), Expect = 6.6e-38, Sum P(2) = 6.6e-38
Identities = 27/139 (19%), Positives = 55/139 (39%)
Query: 490 LPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRIVVFSTMGMM 549
L D +T SL LE+ I S L A G+ H L + VV + +
Sbjct: 1101 LADMHSTEISLKQRLEYISRAILSAKSSSSVSSLGADGEFL--HELEEKMEVVRIQVQIQ 1158
Query: 550 EVV---FNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIV-HSENLISN 605
E + F++ + + +L+S + + F + C + HS+ ++ +
Sbjct: 1159 ETLRRQFSQHPSVQGAITQLDSELMDITKLYGEFADHFRLSECKLAIIHCAGHSDPILVH 1218
Query: 606 AVAEKAAEAFVDPRLVGMP 624
++ ++ E ++ +V P
Sbjct: 1219 SLWQEIIEKELNDSVVMSP 1237
Score = 37 (18.1 bits), Expect = 1.2e-46, Sum P(4) = 1.2e-46
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 558 DILRRLFELNSPRSILED 575
D+ +L E+NSP LED
Sbjct: 1047 DLTDKLLEVNSP--YLED 1062
Score = 37 (18.1 bits), Expect = 2.8e-24, Sum P(4) = 2.8e-24
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 229 CHTAGVGNVISRWIVPNVFRFG 250
C A +S W FR+G
Sbjct: 553 CSNAACDREVSVWATRAFFRYG 574
>FB|FBgn0021761 [details] [associations]
symbol:Nup154 "Nucleoporin 154kD" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IDA] [GO:0005643
"nuclear pore" evidence=IEA;ISS;NAS] [GO:0006913 "nucleocytoplasmic
transport" evidence=IEA] [GO:0017056 "structural constituent of
nuclear pore" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IDA] InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913
GO:GO:0017056 eggNOG:COG5308 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 EMBL:Y17111 PIR:T13991
ProteinModelPortal:O62536 STRING:O62536 PaxDb:O62536 PRIDE:O62536
FlyBase:FBgn0021761 InParanoid:O62536 OrthoDB:EOG4V15FN
ArrayExpress:O62536 Bgee:O62536 Uniprot:O62536
Length = 1365
Score = 401 (146.2 bits), Expect = 5.6e-56, Sum P(6) = 5.6e-56
Identities = 98/289 (33%), Positives = 157/289 (54%)
Query: 66 LPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGEEQVIC 125
+P ++E + + + G+FPEI RAW ++D+ +++W F++ Y G +I
Sbjct: 78 IPNEILEHFKHI--KCHCTMGLFPEIGRAWLTIDSEIYIWTFNQ-TRDVAYYDGLSHLIV 134
Query: 126 AVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPEYTVPS 185
+VGL K KPG+FV+ ++YLL+L TP+E+I++GV G Y E+ L P + + +
Sbjct: 135 SVGLVKPKPGVFVQDVKYLLVLTTPIEVIVLGVTF-----GESSYNEMQLMNRPVFVIGT 189
Query: 186 DGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY-KRCRKVCHTAGVGNVISRWIVP 244
D V+++ I TD GRI L GRDG +YE+ Y S W+ KRC+K+ + G+ +S ++VP
Sbjct: 190 DNVSISVIKGTDDGRIFLGGRDGCLYEIYYQAESSWFGKRCKKINLSQGL---VS-YMVP 245
Query: 245 NVFR-FGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFNQRD 303
+ + F VDPI + DN R+LLY TE+ ++ + + + A Q D
Sbjct: 246 SFLKVFSEVDPIEHIEIDNSRKLLYVLTEKGVIEAWDISTS-----YTTARRLGRITQND 300
Query: 304 THHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMY 352
+ P S SV +I PLS ++ LHLVAV G R++
Sbjct: 301 ITNQAVSLITTVDP--SIFKSVKAICPLSADDADKLHLVAVTQCGVRLF 347
Score = 143 (55.4 bits), Expect = 5.6e-56, Sum P(6) = 5.6e-56
Identities = 47/156 (30%), Positives = 69/156 (44%)
Query: 821 LVCSEEGDRLATR------LISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFF 874
L CS D L TR LI +L+ Y D G V ++S LRE CP+ ++ D +
Sbjct: 800 LTCSTFRDLLITRSEVCAFLIISLINLYLK-DAAG-VSEVSKNLRENCPNLYRHEDDVTY 857
Query: 875 LAVECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQ 934
A E L A + + EKE++ R + + + L ++C +F F+E V+ L
Sbjct: 858 KATELLMNAKNCTSATEKEHMLRTTLHMCKEAAPTLPLHSICMQFISADFFEGVIELSAV 917
Query: 935 KAQALDP--AGDAF-NDQIDAATRE-YALVQRQQCY 966
A DP G F N+ A RE Y + Y
Sbjct: 918 CASKSDPEEVGVHFYNNGEPADDREGYTCFATRMAY 953
Score = 118 (46.6 bits), Expect = 5.6e-56, Sum P(6) = 5.6e-56
Identities = 34/103 (33%), Positives = 50/103 (48%)
Query: 1225 KELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKG 1284
KEL+ L ITQLY +A PF+LWE L +L +++ D +I W ++I+ + K
Sbjct: 1154 KELNYALYDITQLYQHFAEPFDLWECQLSILNCSHHN---DPLLIESVWGQIINSVVDKP 1210
Query: 1285 GI-AEACSVL--K-RVGSHMYPGDGAVLPLDTLCLHLEKAALE 1323
G +E C+ L K + Y G P L LE A +
Sbjct: 1211 GTTSERCNRLFTKIEILVREYGESGVCFPFAFLIRELEVKACQ 1253
Score = 73 (30.8 bits), Expect = 5.6e-56, Sum P(6) = 5.6e-56
Identities = 31/115 (26%), Positives = 49/115 (42%)
Query: 1091 DLLARYYVLKRQHXXXXXXXXXXXXXXSTDEKDAPTLDQRRQYLSNAILQAKNATNSDSL 1150
DLL +YY H S + L+QR +YL A++ +N SL
Sbjct: 1058 DLLWKYYEKNSHHSQAAHILDNLAMTRSENIN----LEQRIEYLVRAVMCMRNGNVGSSL 1113
Query: 1151 VGSTRGAFDNGL---LDLLEGKLAVLRFQTKI-KDELEAIASSLETSVDMSESTQ 1201
+ G F L LD+ + +VL T++ D+LEA + E + + + TQ
Sbjct: 1114 ---SNGIFLKELEDKLDIARVQKSVLAAMTELASDKLEAATAVKELNYALYDITQ 1165
Score = 68 (29.0 bits), Expect = 5.6e-56, Sum P(6) = 5.6e-56
Identities = 39/151 (25%), Positives = 64/151 (42%)
Query: 478 EGRMLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDL---ST-QH 533
EG ML +T D ++ S S + F + + + E G +W ++ ST Q
Sbjct: 422 EGTMLMITTQQHEQDLLWSLSSAPS-VNFT-YLVESTALESLDGVVWGLAEVHEPSTPQR 479
Query: 534 ILP------RRRIVVFSTMGMMEVVFNRPVDILRR-LFELNSPR-SILEDFFNRFGAGEA 585
P R++ + + G + + VD+LR+ L N P ++ FF EA
Sbjct: 480 KSPLNSARHARKVALLTNQGTHIIEVLKMVDVLRQILLSCNGPHHEEVKMFFQSQNQREA 539
Query: 586 AAMCLMLAARIVHSENLISNAVAEKAAEAFV 616
L+LA S+ + VA AA+AF+
Sbjct: 540 CVTALLLAT----SDTYRGSDVALWAAQAFM 566
Score = 61 (26.5 bits), Expect = 5.6e-56, Sum P(6) = 5.6e-56
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 647 VVQEAEP-VFSGAYEGLCLCASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLE 705
V E P VFS ++GL + SR+L +W++ + N LS +L
Sbjct: 644 VSNENSPIVFSAKHDGLYMYVSRMLHSVWQMRCV---------NEQFCSNLSQSECALLL 694
Query: 706 NKIRSLEKFL 715
+ +RSL FL
Sbjct: 695 SDLRSLRSFL 704
Score = 38 (18.4 bits), Expect = 6.6e-53, Sum P(6) = 6.6e-53
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 417 KVETAYYSAGTLVLSDASPPTMSSLIIVSKDPS 449
+V A+Y+ GT+++ L +S PS
Sbjct: 414 QVHAAHYTEGTMLMITTQQHEQDLLWSLSSAPS 446
Score = 38 (18.4 bits), Expect = 7.8e-48, Sum P(6) = 7.8e-48
Identities = 16/70 (22%), Positives = 31/70 (44%)
Query: 1219 IVREKAKELSLDLKSITQLY------NE--YAVPFELWEICLEMLYFANYTGDADSSIIR 1270
IV EK ++LD++ + + Y NE +A W + ++ + D SI
Sbjct: 1260 IVPEKLVSMNLDIELLLEYYSRMISMNERVWANEGNEWHLIQSVIRVVSLLADNAQSIWY 1319
Query: 1271 ETWARLIDQA 1280
+ R++ +A
Sbjct: 1320 RSKRRIVGKA 1329
Score = 37 (18.1 bits), Expect = 2.8e-40, Sum P(4) = 2.8e-40
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 704 LENKIRSLEKFLRCIRNQRRG 724
LE +I L + + C+RN G
Sbjct: 1090 LEQRIEYLVRAVMCMRNGNVG 1110
>ASPGD|ASPL0000004413 [details] [associations]
symbol:nup170 species:162425 "Emericella nidulans"
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0017056 "structural constituent of nuclear pore"
evidence=IEA] InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913
EMBL:BN001301 GO:GO:0017056 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 OMA:ENGYEET
EnsemblFungi:CADANIAT00007531 Uniprot:C8V1X8
Length = 1346
Score = 326 (119.8 bits), Expect = 3.0e-44, Sum P(4) = 3.0e-44
Identities = 96/343 (27%), Positives = 175/343 (51%)
Query: 15 AGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEVVDTWDLPTVLVERY 74
A ++D + +E A D++ L ++S W P + V +++P + ++Y
Sbjct: 72 AARTINDTLTQE-ARYPDLDSYLSQG-FSSDYDIPVSSTWAPF-QKVRMYNIPDQIFDQY 128
Query: 75 NAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGEEQVICAVGLAKSKP 134
N A + + G+ E+ AW ++DN+L+LW + + Q + + I AV LAK +P
Sbjct: 129 NLA--QVSTSMGLLAELNHAWVAIDNALYLWDYTHTNPQLVGFEDQPNSINAVKLAKPRP 186
Query: 135 GIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPEYTVPSDGVTMTCIT 194
G+F+ +I +LL+++T E++L+G+ C G+ Y +++L T G+ + I
Sbjct: 187 GVFLPSITHLLVISTTAEVLLLGMKCEPTPGGS--Y-QVTLYQTGMSTSVR-GLDIHIIA 242
Query: 195 CTDK-GRILLAGR-DGNIYELLYTTGSGWYK-RCRKVCHTAGVGNVISRWIVPNV-FRFG 250
+D GRI AG D ++YEL Y W++ RC K+ HT+ + IS+ + P++ F
Sbjct: 243 SSDATGRIFFAGSSDNDVYELTYQQEEKWFQGRCSKINHTS---SRISQ-LAPSLSFTQR 298
Query: 251 AVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFNQRDTHHGGRQ 310
+ +V++V D+ R+LLY + ++VF L +G L +++ G
Sbjct: 299 PSEQVVQMVMDDSRRLLYTLSSASTIRVFHLRADGSVALAITKPALDIYANI-----GHI 353
Query: 311 TTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMYL 353
+A ++K +VSISP+ E+ HL+A + G R+YL
Sbjct: 354 IASNQA--LNSKVRIVSISPIPAAEASRYHLMATTATGYRIYL 394
Score = 121 (47.7 bits), Expect = 3.0e-44, Sum P(4) = 3.0e-44
Identities = 58/278 (20%), Positives = 111/278 (39%)
Query: 787 LAAIELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLISALMEYYTDPD 846
++ + +L V +V +Q ++LT+ +L + +G +A L+ ++
Sbjct: 773 ISFVTVLFDEKVEEIVALLPEESKQRFLKLTYEELFSTTKGHDIAKELVKGIVNRNI--- 829
Query: 847 GRGT-VDDISGRLREGCPSYFKESDYKFFLAVECLERAAVTS-DSEEKENLAREAFNFLS 904
+G V+ ++ LR C S+ D F A E L+RA +SE NL E+ +
Sbjct: 830 AKGANVETVADALRRRCGSFCSSEDVVIFKAQELLKRATEAGFNSELGRNLLNESLHLFQ 889
Query: 905 KVPESADLRTVCRRFEDL---RFYEAVVRLPLQKAQALDPAGDAFNDQIDAATREYALVQ 961
+V E+ + + E +F+ ++L L A D A +D Q
Sbjct: 890 QVSENLPMDYLVPAVESYISNQFFAGAIQLALNVAGRSDKANLGLGWMMDG--------Q 941
Query: 962 RQQCYEIITSALRSLKGDSSQREFGSPVRPAGPRSALDPASRKKYICQIVQLGVQSPDRI 1021
CY++I + ++ ++Q P G + + A RK I+ + S D++
Sbjct: 942 PSSCYDLIFKVVLAVDNLAAQ----DPGVVDGQLTTI--AKRKNEAYGIIAV---SEDQV 992
Query: 1022 FHEYLYRTMIDXXXXXXXXXXXXPDLVPFLQSAGREPI 1059
F LY ++ P +V +L+ + I
Sbjct: 993 FLTSLYDWYLEQGWSDRLLRSESPYVVEYLKRKSTDDI 1030
Score = 119 (46.9 bits), Expect = 3.0e-44, Sum P(4) = 3.0e-44
Identities = 33/108 (30%), Positives = 58/108 (53%)
Query: 1225 KELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLI----DQA 1280
+E+ + ++ ++N+YA ++ICL++ Y A+Y AD +R TW L+ D+A
Sbjct: 1131 EEVDGPIMEVSTMFNQYADVASYYDICLQIFYIADYRNPAD---VRATWQHLLQTLHDEA 1187
Query: 1281 LSKGGIA----EAC-SVLKRVGSHMYPGDGAVLPLDTLCLHLEKAALE 1323
+++G EA L+ +G+ + D AV P+ L LE+ ALE
Sbjct: 1188 VARGSAGPQPYEAVIDKLRSLGARLRMSD-AVFPIPILLPMLERYALE 1234
Score = 100 (40.3 bits), Expect = 3.0e-44, Sum P(4) = 3.0e-44
Identities = 73/300 (24%), Positives = 123/300 (41%)
Query: 447 DPSSQS--YPTGSLGT-SARISRALRESV-TSLPVEGRML-SVTDILPLPDTATTVQ-SL 500
DP+S S YP G + + S +++ S P GR+ S +++P T + SL
Sbjct: 453 DPTSSSVRYPPGYFFCFTCQDSTQKSDTLFISAPDSGRVARSQENVIPGKAAETGIWLSL 512
Query: 501 YSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRIVVFSTMGMMEVVFNRPVDIL 560
S +E G +S + S+ +L+ Q P I + + G+ R VDI
Sbjct: 513 GSRMEDIG--LSSPTTPASATPSGFGNELAVQFENPSAEIAILTNTGIHVFRRRRLVDIF 570
Query: 561 RRLFELNSP------RSILEDFFNRFGAGEAAAMCLMLAARI---VHSENLISNA----V 607
L +++F +G E A L +A V +++ +S V
Sbjct: 571 AALVRNGGSGGEEGLEGEIKNFIRTYGRSETLATALAVACGQGVEVSTDSRLSKINDPDV 630
Query: 608 AEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQEAEPVFSGAYEGLCLCAS 667
E A + F+D G P L NA+A+ T A + VV P S + G+ L S
Sbjct: 631 LEFARKVFID--YGGRPTLN-ENAVADNSTPA----IDTVV----P--SPRHAGIALYIS 677
Query: 668 RLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLENKIRSLEKFLRCIRNQRRGLYG 727
RLL +W+ V VV G + + +++ + +L++F + ++ GL G
Sbjct: 678 RLLRSVWKKEVAVVGGGPGGAQ-TISPSFPRAKLLAIQHDLSALQEFFKTNKSFIEGLSG 736
Score = 48 (22.0 bits), Expect = 2.7e-31, Sum P(3) = 2.7e-31
Identities = 14/60 (23%), Positives = 25/60 (41%)
Query: 847 GRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAVTSDSEEKENLAREAFNFLSKV 906
G G + + G ++ +Y + LAV C + V++DS + + F KV
Sbjct: 578 GSGGEEGLEGEIKNFIRTYGRSETLATALAVACGQGVEVSTDSRLSKINDPDVLEFARKV 637
Score = 43 (20.2 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 433 ASPPTMSSLIIVSKDPSSQSYPTGSLGTSARISRALRESVT 473
A PP+ + ++ + P S +L T R +R + +++T
Sbjct: 41 AQPPSDAGQPVLPRLPPSIKPAPQNLNTEERAARTINDTLT 81
Score = 41 (19.5 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 268 YARTEEMKLQVFVLGPNG-----DGPLKKVAEERNLFNQRDTH--HGGRQTTGQRAPHRS 320
Y R+E + + V G D L K+ + L R +GGR T + A +
Sbjct: 596 YGRSETLATALAVACGQGVEVSTDSRLSKINDPDVLEFARKVFIDYGGRPTLNENAVADN 655
Query: 321 TKPSVVSISP 330
+ P++ ++ P
Sbjct: 656 STPAIDTVVP 665
Score = 37 (18.1 bits), Expect = 3.8e-30, Sum P(3) = 3.8e-30
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 1080 TPIPSNEAKYFDLLA 1094
+PIP+ EA + L+A
Sbjct: 370 SPIPAAEASRYHLMA 384
>POMBASE|SPAC890.06 [details] [associations]
symbol:nup155 "nucleoporin Nup155" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006407 "rRNA export from
nucleus" evidence=ISO] [GO:0006913 "nucleocytoplasmic transport"
evidence=IC] [GO:0017056 "structural constituent of nuclear pore"
evidence=IEA] InterPro:IPR004870 InterPro:IPR015943
PomBase:SPAC890.06 GO:GO:0005737 EMBL:CU329670 Gene3D:2.130.10.10
GO:GO:0005643 GO:GO:0017056 EMBL:AB027888 PIR:T50262
RefSeq:NP_594824.1 STRING:Q9URX8 EnsemblFungi:SPAC890.06.1
GeneID:2543502 KEGG:spo:SPAC890.06 eggNOG:COG5308 KO:K14312
OMA:GRIANAW OrthoDB:EOG4HX884 NextBio:20804512 GO:GO:0006407
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 Uniprot:Q9URX8
Length = 1315
Score = 317 (116.6 bits), Expect = 2.1e-43, Sum P(5) = 2.1e-43
Identities = 95/304 (31%), Positives = 146/304 (48%)
Query: 54 WPPLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQ 113
W P + ++P + E+YN E G+F EI+RAW +VDN LFLW D GQ
Sbjct: 59 WKPFY-LRSVVNIPDRIFEQYNRT--ECFTQMGLFAEIQRAWITVDNRLFLW--DYLSGQ 113
Query: 114 -CPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAE 172
Y I V L + K +FV IQ+LL++AT E++L+GV G +
Sbjct: 114 NFQAYEDLSHTIVNVKLVRPKANVFVSEIQHLLVIATSQEMLLLGVTIDEK-TGELSFFS 172
Query: 173 ISLQPLPEYTVPSDGVTMTCITCTDKGRILLAG-RDGNIYELLYTTGSGWY-KRCRKVCH 230
+Q + G+ + CI ++ GRI +G +D N+YE Y GW+ +RC K+
Sbjct: 173 TGIQ------ISVQGINVNCIVSSEDGRIFFSGNKDPNLYEFSYQLEEGWFSRRCSKINI 226
Query: 231 TAGVGNVISRWIVPNVFRFGAV-DPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPL 289
T G+V +I P+ F FG D I ++ D+ R LLY E + + L NG
Sbjct: 227 T---GSVFDNFI-PSFFSFGTHGDGIKQIAVDDSRSLLYVLRETSSVSCYELTKNGVNRC 282
Query: 290 KKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGR 349
+ ++ +Q + T R+T+ +VSI P+ ES+ ++ VA+ S G
Sbjct: 283 VFYSFS-SMISQAQMLNA----TSPLLDPRTTQ--IVSIVPIPAYESQQIYCVAITSTGC 335
Query: 350 RMYL 353
R Y+
Sbjct: 336 RFYM 339
Score = 172 (65.6 bits), Expect = 2.1e-43, Sum P(5) = 2.1e-43
Identities = 52/196 (26%), Positives = 84/196 (42%)
Query: 793 LSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVD 852
+S H +V ++++ +TF + S+ G + L+++L+ + G G +D
Sbjct: 744 VSDFH--EIVSSTSIDIQKSCSNMTFGEFFTSKRGREVTKELVNSLVNRHLQ-SG-GNID 799
Query: 853 DISGRLREGCPSYFKESDYKFFLAVECLERAAVTSDSEEKENLAREAFNFLSKVPE---S 909
+S LR+ C S+ D F AVE L++A T D EE+++L ++ K
Sbjct: 800 MVSQLLRKKCGSFCSADDVLIFKAVESLKKAKDTVDIEERQSLIELSYTLFKKAAHVFTP 859
Query: 910 ADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDAFNDQIDAAT----REYALVQRQQC 965
DLR ++ L Y V L L A A D A + +D R R +C
Sbjct: 860 EDLRLAVEEYKSLNAYTTAVNLALHVASARDDRNQALSYLVDGMPENDPRREPFESRTKC 919
Query: 966 YEIITSALRSLKGDSS 981
Y I L SL+ S
Sbjct: 920 YSYIFEILDSLESQMS 935
Score = 88 (36.0 bits), Expect = 2.1e-43, Sum P(5) = 2.1e-43
Identities = 31/116 (26%), Positives = 51/116 (43%)
Query: 1222 EKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDAD-----SSIIRETWARL 1276
E +K+L ++ ++ L+N YA P EICL + A+Y G + SII+ T
Sbjct: 1092 ELSKQLDGEIIPLSDLFNNYADPLGYGEICLSIFQCADYRGINEILNCWESIIKTTHENA 1151
Query: 1277 IDQALSKGGIAEACSVLKRVGSHMYPGDGAVLPLDTLCLHLEKAALERLDSQVESV 1332
I + + S LK + + V P++ + E+ A D Q E+V
Sbjct: 1152 IISPVGSSPVEAVSSTLKNLTLRFSQSEN-VFPIEQIIDITERYAF---DQQGEAV 1203
Score = 84 (34.6 bits), Expect = 2.1e-43, Sum P(5) = 2.1e-43
Identities = 48/198 (24%), Positives = 83/198 (41%)
Query: 499 SLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRIVVFSTMGMMEVVFNRPVD 558
S+Y ++ GF + C ++S + R +L +Q P + + G+ VV RP+D
Sbjct: 468 SMYVPIK--GF-VQDIKCIQNSRE---RNELVSQFNTPPPTFAILTNTGVYVVVHRRPID 521
Query: 559 ILRRLFELNSPRSILED-----FFNRFGAGEAAAMCLMLAARIVHSENLISNAVAE---- 609
+L + S D FF G E A CL + + + + S+A A
Sbjct: 522 VLASAIRMGPSLSSGIDGQVQLFFESVGRAEGCATCLGIVSGCLDQGDF-SHAAANFSGS 580
Query: 610 --KAAEA-FVDPRLVGMPQLE-GSNALANTRTAAGGFSMGQVVQEAEPV-FSGAYEGLCL 664
K A+A +D +V +E G A + + + E V SG ++GL
Sbjct: 581 TTKLAQADLLD--IVKKYYIEFGGKAFIDQSRYNNQYDSSSL----EFVRLSGCHDGLAS 634
Query: 665 CASRLLFPLWELPVMVVK 682
SR++ +W+ V++ K
Sbjct: 635 SISRIIRNVWKNHVIIAK 652
Score = 46 (21.3 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 18/88 (20%), Positives = 37/88 (42%)
Query: 1246 ELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAEACSVL--KRVGSHMYPG 1303
++ + C M + +T + +E L+++ L GG + S L K+ GS
Sbjct: 757 DIQKSCSNMTFGEFFTSKRGREVTKELVNSLVNRHLQSGGNIDMVSQLLRKKCGSFCSAD 816
Query: 1304 DGAVLP-LDTLCLHLEKAALERLDSQVE 1330
D + +++L + +E S +E
Sbjct: 817 DVLIFKAVESLKKAKDTVDIEERQSLIE 844
Score = 45 (20.9 bits), Expect = 4.2e-15, Sum P(5) = 4.2e-15
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 461 SARISRALRESVTSLPVEGRMLSVTDILPLPDTATTVQSLY 501
S+ IS+A + TS ++ R + I+P+P A Q +Y
Sbjct: 288 SSMISQAQMLNATSPLLDPRTTQIVSIVPIP--AYESQQIY 326
Score = 42 (19.8 bits), Expect = 2.1e-43, Sum P(5) = 2.1e-43
Identities = 23/96 (23%), Positives = 38/96 (39%)
Query: 1084 SNEAKYFDLLARYYVLKRQHXXXXXXXXXXXXXXSTDEKDAPTLDQRRQYLSNAILQAKN 1143
+ + K DLL +YY + Q+ A +L+QR +YL+ A
Sbjct: 991 TKDMKIADLLWQYYAKREQYYQASIVLYDLATTHL-----AFSLEQRIEYLTRA-----K 1040
Query: 1144 ATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKI 1179
S + S R + +L +LE +L V Q +
Sbjct: 1041 GFGSCHVPNSLRHKMNKVMLSVLE-QLDVASIQDDV 1075
Score = 39 (18.8 bits), Expect = 1.6e-14, Sum P(5) = 1.6e-14
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 80 EGNALCGIFPEIRR---AWAS 97
EG+ +C PE+ R AW S
Sbjct: 438 EGDVVCCTAPEVGRIANAWQS 458
Score = 37 (18.1 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 24/113 (21%), Positives = 46/113 (40%)
Query: 835 ISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAV-ECLERAAVTSDSEEKE 893
+S L Y DP G G + C S F+ +DY+ + C E ++ + E
Sbjct: 1104 LSDLFNNYADPLGYGEI----------CLSIFQCADYRGINEILNCWE--SIIKTTHENA 1151
Query: 894 NLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRL-PLQKAQALDPAGDA 945
++ + + V S+ L+ + RF + ++ + + A D G+A
Sbjct: 1152 IISPVGSSPVEAV--SSTLKNLTLRFSQSENVFPIEQIIDITERYAFDQQGEA 1202
Score = 37 (18.1 bits), Expect = 1.5e-25, Sum P(4) = 1.5e-25
Identities = 6/26 (23%), Positives = 13/26 (50%)
Query: 1059 IQEVRAVSGITSAASLMGQTGTPIPS 1084
+Q+++ + L+ Q TP P+
Sbjct: 477 VQDIKCIQNSRERNELVSQFNTPPPT 502
>UNIPROTKB|E2QVP9 [details] [associations]
symbol:NUP155 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0017056 "structural constituent of nuclear
pore" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913 GO:GO:0017056
InterPro:IPR014908 PANTHER:PTHR10350 Pfam:PF08801
Ensembl:ENSCAFT00000029657 Uniprot:E2QVP9
Length = 772
Score = 432 (157.1 bits), Expect = 5.1e-41, Sum P(3) = 5.1e-41
Identities = 108/309 (34%), Positives = 172/309 (55%)
Query: 56 PLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCP 115
P + + LP LVE++ + N + G+FP I RAW ++D+ +F+W ++ G
Sbjct: 79 PEISSIRRVPLPPELVEQFGHM--QCNCMMGVFPPISRAWLTIDSDIFMWNYED-GGDLA 135
Query: 116 EYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCS--------GAGDGT 167
+ G + I AVGL K K GIF +++LL+LATPV+++++G+ + G+G
Sbjct: 136 YFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTEKKIGSGVLN 195
Query: 168 DPYAE-ISLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGSGWY-KRC 225
D + L P P Y++P+D + IT TD GRI LAG+DG +YE+ Y +GW+ +RC
Sbjct: 196 DSMCGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRC 255
Query: 226 RKVCHTAGVGNVISRWIVPNV--FRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGP 283
RK+ H+ + +S ++VP++ F F DPIV++ DN R +LY R+E+ +QV+ LG
Sbjct: 256 RKINHSK---SALS-FLVPSLLQFTFSEDDPIVQIAIDNSRNILYTRSEKGVIQVYDLGQ 311
Query: 284 NGDGPLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVA 343
+G G + +VA N + G T R+ KP +V I+ + ES L+A
Sbjct: 312 DGQG-MSRVASVSQ--NSIVSAAGNIARTIDRSVF---KP-IVQIAVIENSESLDCQLLA 364
Query: 344 VLSDGRRMY 352
V G R+Y
Sbjct: 365 VTHAGVRLY 373
Score = 93 (37.8 bits), Expect = 5.1e-41, Sum P(3) = 5.1e-41
Identities = 37/129 (28%), Positives = 51/129 (39%)
Query: 532 QHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELN--SPRSILEDFFNRFGAGEAAAMC 589
QH+LP ++ V+ S G + RPVD LR L N +E FF +A A C
Sbjct: 496 QHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATC 555
Query: 590 LMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQ 649
L+LA V+ A AF R G Q+ L G +G V
Sbjct: 556 LILACSAA-----CDREVSAWATRAFFRNRYGGEAQMRFPTTLPAPSNV--GPILGSPVY 608
Query: 650 EAEPVFSGA 658
+ P+ S +
Sbjct: 609 PSSPIPSSS 617
Score = 78 (32.5 bits), Expect = 6.2e-40, Sum P(2) = 6.2e-40
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 611 AAEAFVDPRLVGMPQLEGSNALA-NTRTAAGGFSMGQVVQEA-----EPVFSGAYEGLCL 664
++ + +P +G P +G + A +T G Q + E V+SG + G+C+
Sbjct: 615 SSSPYPNPSFLGTPS-QGVHPPAMSTPVCVSGNPATQAASMSCMAAPEIVYSGKHNGICI 673
Query: 665 CASRLLFPLWELPVMVVKGDAISENGVVVCRLSSGAMQVLEN---KIRSLEKFL 715
SR++ +W+ +VV+ S N + SS Q+LE+ +++ L++FL
Sbjct: 674 YFSRIMGNIWDAS-LVVERVFKSGNREITAIESSVPSQLLESVLQELKGLQEFL 726
Score = 45 (20.9 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 435 PPTMSSLIIVSKDPSSQS 452
PP MS+ + VS +P++Q+
Sbjct: 634 PPAMSTPVCVSGNPATQA 651
Score = 40 (19.1 bits), Expect = 5.1e-41, Sum P(3) = 5.1e-41
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 986 GSPVRPAGPRSALDPASRKKYICQIVQLGVQSP 1018
GSPV P+ P + P ++ Q GV P
Sbjct: 604 GSPVYPSSPIPSSSPYPNPSFLGTPSQ-GVHPP 635
>UNIPROTKB|G0ZGU4 [details] [associations]
symbol:NUP170 "Nup170p" species:285224 "Chaetomium
thermophilum var. thermophilum" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913
GO:GO:0017056 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 EMBL:JF276286
IntAct:G0ZGU4 Uniprot:G0ZGU4
Length = 1416
Score = 314 (115.6 bits), Expect = 1.5e-40, Sum P(4) = 1.5e-40
Identities = 97/344 (28%), Positives = 159/344 (46%)
Query: 12 VTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEVVDTWDLPTVLV 71
V A VV+ + + S D++ + + + W P VV ++P +
Sbjct: 78 VAKAAQVVNQTLQLD-DSYPDLDSYCRPGASSDYEMQSSDSSWAPF-HVVRHHNIPDKVF 135
Query: 72 ERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGEEQVICAVGLAK 131
E NA GE G+F EI AWAS+D+SLFLW + + + Y I AV L
Sbjct: 136 EHLNA--GEVFTKLGLFAEIGYAWASIDSSLFLWDYTHPNPELIGYEEATHTITAVALVP 193
Query: 132 SKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPEYTVPSDGVTMT 191
KPG+FV+ I ++L++AT E+IL+GV + G+ S + +V G ++
Sbjct: 194 PKPGVFVKTITHVLVVATTSEIILLGVSATPTPSGSKSLTLYSTR----MSVHRGGSDVS 249
Query: 192 CITCTDKGRILLAGR-DGNIYELLYTTGSGWYK-RCRKVCHTAGVGNVISRWIVPNVFRF 249
I T GRI L G D +I+E+ Y W+ RC K+ H+ + + + F
Sbjct: 250 FIVGTKDGRIFLGGESDTDIHEIFYQQEERWFSSRCGKINHSHPGWSAVVPSLAGLPFGS 309
Query: 250 GAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFNQRDTHHGGR 309
+ + L D+ R LLY+ + ++ + + G L KV E+ RD H
Sbjct: 310 RQQEWLRGLYVDDTRNLLYSLSNRSTIRTYHM--EGPEKLTKVIEKDKTSCLRDFAH--- 364
Query: 310 QTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMYL 353
+P + K ++V++SP+ E+ LHL+A+ G R++L
Sbjct: 365 --MADSSPLFTDKTNIVALSPIPATEASKLHLMALTDTGCRLFL 406
Score = 189 (71.6 bits), Expect = 1.5e-40, Sum P(4) = 1.5e-40
Identities = 81/304 (26%), Positives = 130/304 (42%)
Query: 758 LFGSYSRNADSNGAGTSNKRQRLPYSPAE-LAAIELLSQHHVTRLVQGFDANLRQELVQL 816
LFG A+ + Q+L S +E ++ + +L V+ + DA +Q+L L
Sbjct: 741 LFGRQEDIANQKEHQALHALQKLMESISEGISFVLMLFDERVSDIYARLDAVSQQQLKDL 800
Query: 817 TFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLA 876
T+ QL G LA L+ A++ G V+ ++ LR C S+ D F A
Sbjct: 801 TYEQLFSQTPGKELAKVLVKAIVNRNI-ASG-ANVETVADALRRRCGSFCSPDDVVTFKA 858
Query: 877 VECLERAAVTS-DSEEKENLAREAFNFLSKVPES---ADLRTVCRRFEDLRFYEAVVRLP 932
E L+RA+ + +S L E+ +V S A+L T ++ L++Y ++L
Sbjct: 859 QEQLQRASEQAHNSPVLRALLAESLRLFEQVAGSLTPANLTTAVEQYISLKYYAGAIQLC 918
Query: 933 LQKAQALDPAGDAF---NDQIDAA-TREYALVQRQQCYEIITSALRSLKGDSSQREFGSP 988
L AQ D A ND A +R+ A +R+ CY +I L L+ D + G P
Sbjct: 919 LTVAQQKDRGNTALSWVNDGKPANDSRKKAFDERKICYNLIHQVLDKLESDFA----GEP 974
Query: 989 VRPAGPRSALDPASRKKYICQIVQLGVQSPDRIFHEYLYRTMIDXXXXXXXXXXXXPDLV 1048
G R L A+++ +V S D +FH LY I+ P ++
Sbjct: 975 ELVDG-RPTL-AATKRMEAYNVVN---DSSDEVFHFDLYEWYIEKGWTDRILSIDSPHVI 1029
Query: 1049 PFLQ 1052
+LQ
Sbjct: 1030 TYLQ 1033
Score = 76 (31.8 bits), Expect = 1.5e-40, Sum P(4) = 1.5e-40
Identities = 19/67 (28%), Positives = 39/67 (58%)
Query: 1218 KIVREKAKELS--LD--LKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETW 1273
+I E+ E+ LD ++++T L+N+YA +++CL + + A++ + I +TW
Sbjct: 1130 RIPEERKAEIEEFLDGPIRTLTDLFNDYADQANYYDLCLLIFHAADFH---NPRTILDTW 1186
Query: 1274 ARLIDQA 1280
LI+Q+
Sbjct: 1187 NNLINQS 1193
Score = 53 (23.7 bits), Expect = 1.5e-40, Sum P(4) = 1.5e-40
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 646 QVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVV-KGDAISENGVVVCRLSSGAMQVL 704
Q V E+ + S ++ L L +RL+ LW+ V+ V G IS + + + +
Sbjct: 661 QSVSESVRL-SSRHDALALYLTRLVRTLWKAKVVQVGSGSDISST------IPTSKLVTI 713
Query: 705 ENKIRSLEKFLRCIRNQRRGL 725
+ + L FL ++ +GL
Sbjct: 714 QENVERLRNFLEANKSTIQGL 734
Score = 42 (19.8 bits), Expect = 5.0e-21, Sum P(3) = 5.0e-21
Identities = 20/83 (24%), Positives = 36/83 (43%)
Query: 1167 EGKLAV---LRFQTKIKDELEAIASSLETSVDMSESTQNGSAPDSSSTTDANYAKIVREK 1223
+GK +V +R ++ D L + L ++ ++ Q GS D SST + ++E
Sbjct: 658 DGKQSVSESVRLSSR-HDALALYLTRLVRTLWKAKVVQVGSGSDISSTIPTSKLVTIQEN 716
Query: 1224 AKELSLDLKSITQLYNEYAVPFE 1246
+ L L++ A P E
Sbjct: 717 VERLRNFLEANKSTIQGLAPPSE 739
Score = 39 (18.8 bits), Expect = 9.7e-37, Sum P(4) = 9.7e-37
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 1383 FDQCSWYLESG 1393
FD WY+E G
Sbjct: 1005 FDLYEWYIEKG 1015
>DICTYBASE|DDB_G0291163 [details] [associations]
symbol:nup155 "nucleoporin 155" species:44689
"Dictyostelium discoideum" [GO:0017056 "structural constituent of
nuclear pore" evidence=IEA] [GO:0006913 "nucleocytoplasmic
transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR004870 dictyBase:DDB_G0291163 SUPFAM:SSF50978
GO:GO:0005643 GO:GO:0006913 GenomeReviews:CM000154_GR
EMBL:AAFI02000175 GO:GO:0017056 eggNOG:COG5308 KO:K14312
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 OMA:ENGYEET RefSeq:XP_635370.1
EnsemblProtists:DDB0235243 GeneID:8628018 KEGG:ddi:DDB_G0291163
InParanoid:Q54F20 ProtClustDB:CLSZ2735604 Uniprot:Q54F20
Length = 1575
Score = 261 (96.9 bits), Expect = 8.5e-39, Sum P(5) = 8.5e-39
Identities = 69/236 (29%), Positives = 122/236 (51%)
Query: 54 WPPLVEVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQ 113
W LV + +LP + Y + + +L G+FPEI RAW S+D +L+LW + + G+
Sbjct: 208 WSTLV-IEKHIELPQEITNGYLSTSTK--SLLGLFPEIGRAWISIDQTLYLWDY-RDSGE 263
Query: 114 CPEYTGEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEI 173
+ Q+I L + K F +A++ ++++ T VE+ L +C S E
Sbjct: 264 LISHN-LSQIITNCALIQPKKNTFKDAVKKVMVVCTHVEIFLFALCYSN---------ET 313
Query: 174 SLQPLPEYTVPSDGVTMTCITCTDKGRILLAGRDGNIYELLYTTGS-GWY--KRCRKVCH 230
+ L ++PSD + +T I T +GRI L+G+DGNIYE+ Y+ + W+ ++ +K+
Sbjct: 314 KFEILSTLSIPSDNIFITDIVGTKEGRIFLSGQDGNIYEIEYSKDNLFWFSNEKIKKINL 373
Query: 231 TAGVGNVISRWIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGD 286
T N + I++L++D +R LLY+ +++ + V+ LG GD
Sbjct: 374 TQTFFN--------SFINLSKKKEIIQLIYDEDRYLLYSLSKDSTINVYSLGKIGD 421
Score = 153 (58.9 bits), Expect = 8.5e-39, Sum P(5) = 8.5e-39
Identities = 42/163 (25%), Positives = 78/163 (47%)
Query: 528 DLSTQHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAA 587
+LS +H+ RR + +++G+ + R VD+L+ + N+P+ I ++FF+ FG A++
Sbjct: 651 ELSNEHMNTPRRFLCLNSLGLHFISKLRYVDLLQNILSSNNPQDI-DNFFDAFGKIIASS 709
Query: 588 MCLMLAARIVHSENLISN------AVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGG 641
+C+ L HS L+ + ++ + D + + + G
Sbjct: 710 LCISLYCSSPHSSILLHDQVYSGISIPKTTTTRIADLAMTFLRRKSGKPQYYQPVVIQQM 769
Query: 642 FS-MGQVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMVVKG 683
F MG V + E ++S AY GL +R+L+PLW V+ G
Sbjct: 770 FGDMGAPVNKTELMYSNAYNGLLAYLARVLYPLWNQSVVTSAG 812
Score = 123 (48.4 bits), Expect = 8.5e-39, Sum P(5) = 8.5e-39
Identities = 47/221 (21%), Positives = 92/221 (41%)
Query: 832 TRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVECLERAAVTSDSEE 891
T LI +LM+ T +D +S +L CP +FK+ + + + E L +
Sbjct: 993 TLLIDSLMK--TLNSHNINIDQVSNQLETECPIFFKKENRELYKVKEKLNMVLRDGSTYF 1050
Query: 892 KENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALDPAGDAFNDQID 951
++L +++ L + + +L + F ++ + V L LQ AQ LDP G +
Sbjct: 1051 TDSLVKDSALILDSISPNYNLSEIVDLFIAIKAFNYVTPLCLQYAQDLDPRGITLIPSNN 1110
Query: 952 AATR-EYALVQRQQCYEIITSALRSLKGDSSQREFGSPVRPAGPRSALDPASRKKYICQI 1010
+ + L Q++ ++ I L ++ D++ S G + + + I I
Sbjct: 1111 PSDEFKLKLSQKKSTFQEIIKLLNFIQSDNNNNNNNSG---GGGGDNNNYNNTFEIIDII 1167
Query: 1011 VQLGVQSPDRIFHEYLYRTMIDXXXXXXXXXXXXPDLVPFL 1051
+Q + DR+ HE +Y +++ P + FL
Sbjct: 1168 IQQVLVCQDRLAHEMIYSWILNNGMTSKFFEINTPFITEFL 1208
Score = 79 (32.9 bits), Expect = 8.5e-39, Sum P(5) = 8.5e-39
Identities = 22/85 (25%), Positives = 39/85 (45%)
Query: 1197 SESTQNGSAPDSSSTTDANYAKIVREKAKELSLDLKSITQLYNEYAVPFELWEICLEMLY 1256
S + N S + D N ++E L+ + IT L+ +YA + L E +MLY
Sbjct: 1296 SNNRNNSSNNNGGQPFDINQ---IKESISNLNKTIFDITTLFTDYARKYYLHE---QMLY 1349
Query: 1257 FANYTGDADSSIIRETWARLIDQAL 1281
+ +D + I+ W +ID+ +
Sbjct: 1350 LCHIGNHSDQNFIQILWKIIIDKEI 1374
Score = 50 (22.7 bits), Expect = 8.5e-39, Sum P(5) = 8.5e-39
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 309 RQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMY 352
+Q Q+ + S K V+ +S E+++ + +A+LS G R+Y
Sbjct: 499 QQQQQQQQQNFSRKNMVIMSIHISPKETEF-NFIAILSSGERLY 541
Score = 50 (22.7 bits), Expect = 6.1e-28, Sum P(4) = 6.1e-28
Identities = 13/59 (22%), Positives = 32/59 (54%)
Query: 1158 FDNGLLDL-LEGKLAVLRFQTKIKDELEAIASSLETSVDMSESTQNGSAPDSSSTTDAN 1215
FD+ ++L ++ K+ +L+F+ + ++ L T ++ ST + ++STT ++
Sbjct: 918 FDSSSIELDIKRKIDLLKFRDILNSDILGKNLPLPTISSLTTSTTTTTTTTTTSTTSSS 976
Score = 47 (21.6 bits), Expect = 4.8e-31, Sum P(5) = 4.8e-31
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 791 ELLSQHHVTRLVQGFDANLRQELVQLTFCQLVCSEEGD 828
ELL HV + L ++++ T C ++ SE+ D
Sbjct: 1225 ELLKAVHVLFQIAERSTTLDEKILAYTNCTMILSEQKD 1262
>WB|WBGene00003794 [details] [associations]
symbol:npp-8 species:6239 "Caenorhabditis elegans"
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0017056 "structural
constituent of nuclear pore" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR004870 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0005643 GO:GO:0006913 GO:GO:0040035
GO:GO:0006997 EMBL:FO080782 GO:GO:0017056 KO:K14312
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 GeneTree:ENSGT00390000016532
GeneID:176966 KEGG:cel:CELE_Y41D4B.19 UCSC:Y41D4B.19b CTD:176966
NextBio:894774 RefSeq:NP_500102.3 ProteinModelPortal:Q95Y15
IntAct:Q95Y15 MINT:MINT-1126912 PRIDE:Q95Y15
EnsemblMetazoa:Y41D4B.19b WormBase:Y41D4B.19b HOGENOM:HOG000020051
InParanoid:Q95Y15 OMA:IDERIRG ArrayExpress:Q95Y15 Uniprot:Q95Y15
Length = 1090
Score = 245 (91.3 bits), Expect = 4.0e-27, Sum P(3) = 4.0e-27
Identities = 84/320 (26%), Positives = 137/320 (42%)
Query: 86 GIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYLL 145
G F +I R W +DN+L++W ++ D + + I V L KPG+F IQY L
Sbjct: 2 GFFTQISRVWVVIDNNLYMWNYETND-DLAFFDSSDAAILKVSLVNIKPGVFEPEIQYGL 60
Query: 146 ILATPVELILVGVCCSGAGDGTDPYAEISLQPLPEYTVPSDGVTMTCITCTDKGRILLAG 205
++ T ++ L V +G + IS+ + + DG T+ I+ T GR+
Sbjct: 61 VVGTISDICLYPVF-DFVENGA---SSISIDSKRCFKIALDGATVNDISYTSNGRVFYTA 116
Query: 206 RDGNIYELLYTTGSGWY----KRCRKVCHTAGV-GNVISRWIVPNVFRFGAVDPIVELVF 260
D ++E +Y +GW+ +CR V TA + G +IS +P F + +P+ ++
Sbjct: 117 -DDQLFEFVYEKQNGWFGSTNHKCRGVNQTASILGTLIS---LP--FFGSSKEPLDQITI 170
Query: 261 DNERQLLYARTEEMKLQVFVLGPNGDG-------PLKKVAEERNLFNQRDTHHGGRQTTG 313
D R ++Y + V+ LG +G P+ K+A E ++ Q G +T+
Sbjct: 171 DKSRNIMYLLGRAGTVSVWDLGADGAACAKFLSVPISKIAHEAHILTQ----FGHDETSF 226
Query: 314 QRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMYLXXXXXXXXXXXXXXXXXFNN 373
H S+ SI L +S L+LVA + G R+Y N
Sbjct: 227 ----H-----SITSIKALEASQSAALNLVATTAKGVRLYFSVSTGPQSTMAMFNNSGTPN 277
Query: 374 HH------FRPSCLKVVTTR 387
RP CL+V R
Sbjct: 278 ERNRPQTSVRPQCLRVAHVR 297
Score = 130 (50.8 bits), Expect = 4.0e-27, Sum P(3) = 4.0e-27
Identities = 51/193 (26%), Positives = 83/193 (43%)
Query: 759 FGSYSRNADS--NGAGTSNKR------QRLPYSPAELAAIELLS-QHHVTRLVQGFDANL 809
F YS N N TS +R ++L + E ++ LL+ ++++T + G + L
Sbjct: 633 FNGYSSNMTDRLNHEATSLERHSLIGLRKLIDATLETLSLWLLAYEYNLTAISSGMNPQL 692
Query: 810 RQELVQLTFCQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKES 869
LV +G L LI A+++Y+ D GT +S LR+ CP+ + E
Sbjct: 693 LPNFSSRKLAHLV--SDGSNLNAELIRAMIKYFLG-DEAGT-KILSESLRQLCPNLYSED 748
Query: 870 DYKFFLAVECLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRF-EDLRFYEAV 928
D A+E LE A + L + A + L + C++ E + YE +
Sbjct: 749 DACVTFAMEQLEAARKQGPGAARRRLVQSAVEMFKQSIGKVVLASTCQQLAESVEDYEPI 808
Query: 929 VRLPLQKAQALDP 941
V L L +A DP
Sbjct: 809 VELCLLRAAKDDP 821
Score = 77 (32.2 bits), Expect = 4.0e-27, Sum P(3) = 4.0e-27
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 1127 LDQRRQYLSNAILQAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTKIKDELEAI 1186
L QR YLS+AIL A++ DS V + +D L +L V Q +IKD L
Sbjct: 857 LTQRCAYLSHAILCAQSC--KDSTVTTN--------IDELRDRLDVANVQMRIKDALGCS 906
Query: 1187 ASSLETSVDMSESTQNGSAPDSSSTTDANYAKIVREKAKELSLDLKSITQLYNEYAVPFE 1246
AS+ S E + P S + +V K ++ L L +Y E + FE
Sbjct: 907 ASA---SARNQEFVRKLDGP-ILSLQELLLQYVVPFKLHKIKLSLLHCAGMYVEKHI-FE 961
Query: 1247 LWEICLEMLYFANY 1260
WE ++ ++Y
Sbjct: 962 TWEDIIQDAIASSY 975
Score = 71 (30.1 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 1221 REKAKELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQA 1280
+E ++L + S+ +L +Y VPF+L +I L +L+ A G I ETW +I A
Sbjct: 914 QEFVRKLDGPILSLQELLLQYVVPFKLHKIKLSLLHCA---GMYVEKHIFETWEDIIQDA 970
Query: 1281 LS 1282
++
Sbjct: 971 IA 972
Score = 38 (18.4 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 1211 TTDANYAKIVREKAKELSLDLKSITQLY-NE 1240
T+DA + +R KA+++ LK ++ NE
Sbjct: 458 TSDAPIDERIRGKAEQILYSLKEAPEIVENE 488
>SGD|S000000175 [details] [associations]
symbol:NUP170 "Subunit of the inner ring of the nuclear pore
complex (NPC)" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA;ISM] [GO:0007059 "chromosome
segregation" evidence=IMP] [GO:0005643 "nuclear pore"
evidence=IEA;IDA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA;IC]
[GO:0017056 "structural constituent of nuclear pore"
evidence=IEA;IGI;IMP] [GO:0036228 "protein targeting to nuclear
inner membrane" evidence=IMP] [GO:0007094 "mitotic spindle assembly
checkpoint" evidence=IGI;IMP;IPI] [GO:0051292 "nuclear pore complex
assembly" evidence=IGI] [GO:0044611 "nuclear pore inner ring"
evidence=IDA] [GO:0006810 "transport" evidence=IEA] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR004870 SGD:S000000175
GO:GO:0007059 GO:GO:0007094 GO:GO:0031965 GO:GO:0006913
EMBL:BK006936 EMBL:X79489 GO:GO:0051028 GO:GO:0051292
TCDB:9.A.14.1.1 GO:GO:0036228 GO:GO:0017056 eggNOG:COG5308
KO:K14312 InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 GeneTree:ENSGT00390000016532
HOGENOM:HOG000246581 OrthoDB:EOG41ZJJZ GO:GO:0044611 EMBL:Z35840
PIR:S45429 RefSeq:NP_009474.1 PDB:3I5P PDB:3I5Q PDBsum:3I5P
PDBsum:3I5Q ProteinModelPortal:P38181 SMR:P38181 DIP:DIP-2450N
IntAct:P38181 MINT:MINT-2788627 STRING:P38181 PaxDb:P38181
PeptideAtlas:P38181 EnsemblFungi:YBL079W GeneID:852199
KEGG:sce:YBL079W CYGD:YBL079w OMA:ENGYEET EvolutionaryTrace:P38181
NextBio:970691 Genevestigator:P38181 GermOnline:YBL079W
Uniprot:P38181
Length = 1502
Score = 251 (93.4 bits), Expect = 5.7e-21, Sum P(4) = 5.7e-21
Identities = 134/586 (22%), Positives = 241/586 (41%)
Query: 59 EVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYT 118
E D +++P ++ ++ + + + GIFPE+ R W ++DN L LW + D +
Sbjct: 149 EKQDVFNIPDEILHEFSTSQTKTDM--GIFPELNRCWITIDNKLILWNINN-DNEYQVVD 205
Query: 119 GEEQVICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPL 178
+ I V L + KP FV A+++LL+++T +EL + + A + E+S+
Sbjct: 206 DMKHTIQKVALVRPKPNTFVPAVKHLLLISTTMELFMFAISLDKATN------ELSVFNT 259
Query: 179 PEYTVPSDGVTMTCITCTDK-GRILLAGR-DG-NIYELLYTTGSGWYK-RCRKVCHTAGV 234
+VP G+ + I ++ GRI AG+ G NI+EL Y+ W+ +C KVC T
Sbjct: 260 -HLSVPVQGIDVIDIVSHERSGRIFFAGQASGLNIWELHYSGSDDWFNSKCSKVCLTKSA 318
Query: 235 ------GNVISRWIVPNVFRFGAV-------------DPIVELVFDNERQLLYARTEEMK 275
N++S+ +P V A+ + I +L D +R ++Y+ + +
Sbjct: 319 LLSLLPTNMLSQ--IPGVDFIQALFEDNSNGNGGFSQETITQLTIDQQRGIIYSLSSKST 376
Query: 276 LQVFVLGPNG-DGPLKKVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKP-SVVSISPLST 333
++ +V+ +GP+ E + T TT + AP K +V IS ++
Sbjct: 377 IRAYVITEKSLEGPMS--IEPAYISRIIGT------TTARAAPILGPKYLKIVKISSVAP 428
Query: 334 LESKWLHLVAVLSDGRRMYLXXXXXXXXXXXXXXXXXFNNHHFRPSCLKVVTTRXXXXXX 393
E+ L LVA+ G R+Y + F PS + +
Sbjct: 429 EENNNLFLVALTVGGVRLYFNGSMGRFNIEALR----LESIKFPPSSVTPEVIQQELLHQ 484
Query: 394 XXXXXXXXXXXXXXRNQSDDISLKVE--TAYYSAGTLVLSDASPPTMSSLIIVSKDPSSQ 451
S+ + LK + ++ T + SP S +I S + Q
Sbjct: 485 QQEQAKRSFPFFSNLMSSEPVLLKFQKKSSVLLETTKASTIISPGIFFSAVIKSSQQTHQ 544
Query: 452 SYPTGSLGTSARISRALRESVTSLPV--EGRM-LSVTDILPLPDTATTVQSLYSELEFCG 508
+ + + A ++V PV + ++ +SV D L V++ + LE G
Sbjct: 545 QEKKENSSVTGTTATAGSKTVKQQPVTLQHKLFVSVPDYGILKTHGKYVENA-TFLETAG 603
Query: 509 -----FEISG--ESCEKSSGKLWARGDLSTQHILPRRRIVVFSTMGMMEVVFNRPVDILR 561
+SG + K G +A + +TQ+ R+ V ++ + + P +I
Sbjct: 604 PVQQIIPLSGLFNATTKPQG--FAN-EFATQYTSETLRVAVLTSTSIEIYKYRTPDEIFE 660
Query: 562 RLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSENLISNAV 607
L + P F +GA EA + L + + SE L SNA+
Sbjct: 661 DLIDNPLP------FVLNYGAAEACSTALFVTCKSNKSEKLRSNAL 700
Score = 75 (31.5 bits), Expect = 5.7e-21, Sum P(4) = 5.7e-21
Identities = 51/261 (19%), Positives = 109/261 (41%)
Query: 808 NLRQELVQLTFCQLVCSEEGDRLATR--LISALMEYYTDPDGRGTVDDISGRLREGCPSY 865
+++++LV+L F L + + R L+S + T G +++ + L+E C S+
Sbjct: 939 DVQKDLVKLDFKDLFAPNDKTKSLIREILLSIINRNITK--G-ASIEYTATALQERCGSF 995
Query: 866 FKESDYKFFLAVECLERAA-VTSDSEEKENL-AREAFNFLSKVPESAD---LRTVCRRFE 920
SD F A+E L RA + + + N + A L ++ + L+
Sbjct: 996 CSASDILGFRAIEHLRRAKEIGLRNYDSLNYHLKNATALLEQIVDDLSIEKLKEAVSMML 1055
Query: 921 DLRFYEAVVRLPLQKAQALDPAGDAF----NDQIDAATREYALVQRQQCYEIITSALRSL 976
+ +Y + L A ++D A N ++ R+ +R Y+++ L +
Sbjct: 1056 SVNYYPKSIEFLLNIANSMDKGKLACQYVANGFLENDDRKQYYDKRILVYDLVFDTL--I 1113
Query: 977 KGDS-SQREFGSPVRPAGPRSALDPASRKKYICQIVQLGVQSPDRIFHEYLYRTMIDXXX 1035
K D ++++ S + S D ++ + + ++ DR+FH ++Y ++
Sbjct: 1114 KVDELAEKKQSSKTQNQISISNDDEVKLRQ---KSYEAALKYNDRLFHYHMYDWLVSQNR 1170
Query: 1036 XXXXXXXXXPDLVPFL-QSAG 1055
P ++P+L + AG
Sbjct: 1171 EEKLLDIETPFILPYLMEKAG 1191
Score = 74 (31.1 bits), Expect = 5.7e-21, Sum P(4) = 5.7e-21
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 1212 TDANYAKIVREKA-KELSLDLKSITQLYNEYAVPFELWEICLEMLYFANYTGDADSSIIR 1270
TDA ++++ K L + S ++L+N++AVP EI L + A++ D +I
Sbjct: 1281 TDARIDSAIKDELIKTLDGKILSTSELFNDFAVPLSYHEIALFIFKIADFR---DHEVIM 1337
Query: 1271 ETWARLIDQAL 1281
W L Q+L
Sbjct: 1338 AKWDELF-QSL 1347
Score = 52 (23.4 bits), Expect = 7.2e-19, Sum P(3) = 7.2e-19
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 876 AVECLERAAVTSDSEEKENLAREAFNFLSK-VPESADLRTVCRRF 919
A C VT S + E L A FL+ +P D++ V R+
Sbjct: 676 AEACSTALFVTCKSNKSEKLRSNALTFLTMGIPGVVDIKPVYNRY 720
Score = 52 (23.4 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 29/129 (22%), Positives = 54/129 (41%)
Query: 1178 KIKDELEAIASSLETSVDMSESTQNGSAPDSSSTTDANYAKIVREKAKELSLDLKSITQL 1237
++ D+ E +A+ E+ + S + S + Y + E L K I
Sbjct: 876 RVIDKTEEVANQAESIAINAMIKMVQSIKEGLSFLNVLYEESEVEGFDNQYLGFKDIISF 935
Query: 1238 YNEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAE--ACSVLKR 1295
+ V +L ++ + L+ N D S+IRE +I++ ++KG E A ++ +R
Sbjct: 936 VS-LDVQKDLVKLDFKDLFAPN---DKTKSLIREILLSIINRNITKGASIEYTATALQER 991
Query: 1296 VGSHMYPGD 1304
GS D
Sbjct: 992 CGSFCSASD 1000
Score = 45 (20.9 bits), Expect = 5.7e-21, Sum P(4) = 5.7e-21
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 620 LVGMPQLEGSNALANTRTAAGGFSMGQVVQEAE-----PVFSGAYEGLCLCASRLLFPLW 674
L+ P L S A N + + GFS + + + S + G+ L +RLL +W
Sbjct: 728 LLSKPTL--STATTNLQQSITGFSKPSPANKEDFDLDDVILSPRFYGIALLITRLLRDIW 785
>CGD|CAL0001635 [details] [associations]
symbol:orf19.2485 species:5476 "Candida albicans" [GO:0044611
"nuclear pore inner ring" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0017056 "structural constituent of nuclear pore"
evidence=IEA] [GO:0036228 "protein targeting to nuclear inner
membrane" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IEA] [GO:0051292 "nuclear pore complex assembly"
evidence=IEA] InterPro:IPR004870 CGD:CAL0001635 GO:GO:0005643
GO:GO:0006913 EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0017056
eggNOG:COG5308 KO:K14312 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 RefSeq:XP_718506.1
RefSeq:XP_718589.1 STRING:Q5A9Z9 GeneID:3639767 GeneID:3639900
KEGG:cal:CaO19.10021 KEGG:cal:CaO19.2485 Uniprot:Q5A9Z9
Length = 1426
Score = 214 (80.4 bits), Expect = 5.8e-16, Sum P(3) = 5.8e-16
Identities = 85/318 (26%), Positives = 142/318 (44%)
Query: 59 EVVDTWDLPTVLVERYNAAGGEGNALCGIFPEIRRAWASVDNSLFLWRFD---KWDGQCP 115
E V DLP E YN+ E G+FPEI R W ++DN L LW + +
Sbjct: 135 EKVQQLDLPDRFFEEYNST--ECITKIGLFPEIERTWIAIDNKLVLWNYKLPRSSFNEAS 192
Query: 116 EYTGEEQV---ICAVGLAKSKPGIFVEAIQYLLILATPVELILVGVCCSGAGDGTDPYAE 172
++ +Q+ I V L K K G+F + YLL+++T V++ + V + + + +
Sbjct: 193 QFLTIDQIRHTILTVKLVKPKKGVFTNEVNYLLLVSTTVDIHIYIVKYDESMNNLEIFN- 251
Query: 173 ISLQPLPEYTVPSDGVTMTCITCTDKGR-ILLAGR-DG-NIYELLYTTGSGWYK-RCRKV 228
P+ +V + G+ + T K I +G DG NI+ L Y+ S + K +C KV
Sbjct: 252 ------PDLSVSTQGLAVDNFTVNSKTNDIYFSGESDGINIWRLDYSNKSSFIKNKCDKV 305
Query: 229 CHT-AGVGNVISRWIVPNVFRFGAV-----------DPIVELVFDNERQLLYARTEEMKL 276
C T G +VI + F G + IV+L D++R +LY+ + + +
Sbjct: 306 CLTKGGFSSVIPNKLSGFGFSSGPSSTTENSSSSIPESIVQLEVDSDRDILYSLSNKSVI 365
Query: 277 QVFVLGPNGDGPLK-KVAEERNLFNQRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLE 335
+V+ L P + + +F T + + R ++SI +S E
Sbjct: 366 RVYKLHPKQEHLTEGSTLTPSVIFKSASTVFV--DASNFKVFERF---KIISIHKISPEE 420
Query: 336 SKWLHLVAVLSDGRRMYL 353
S + L+AV S+G R+ L
Sbjct: 421 SSSIQLIAVTSNGCRILL 438
Score = 97 (39.2 bits), Expect = 5.8e-16, Sum P(3) = 5.8e-16
Identities = 93/468 (19%), Positives = 181/468 (38%)
Query: 530 STQHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMC 589
++Q+ + V + G++ F IL+ L + ++E+F G E +
Sbjct: 591 ASQYTKSPLKFAVLTNFGIVIYQFRTADQILKSLKD-----EVIENFLEENGYEETCSSL 645
Query: 590 LMLAARIVHSENLISNAVAEKAAEAFVD----PRLVGMPQLEGSNALANTRTAAGGFSMG 645
L LA + + S+ KA F R Q S+ + + + ++
Sbjct: 646 LYLACS--YGQYSTSDMYKRKAQILFSTCGNGARFNDSSQQPSSSLIPHHQMNISSYAHP 703
Query: 646 QVVQEAEPVFSGAYEGLCLCASRLLFPLWELPVMV-VKGDAISENG-VVVCRLSSGAM-- 701
V Q V S + G CL SRL W V + I+ +G V V + G +
Sbjct: 704 TVDQV---VLSDRFYGTCLLISRLFRDFWNKKVFSPLSSIKITPSGDVEVASIKEGKLLI 760
Query: 702 QVLENKIRSLEKFLRCIRNQRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFGS 761
Q L + +E F+ G + +G+ + G A S + D + +
Sbjct: 761 QGLNIDKKKVEFFI--------GSVIVLIDFFSENGTNIPGLSAPSYSSDPNQFESEICL 812
Query: 762 YSRNADSNGA--GTSNKRQRLPYSPAELAAIELLSQHHVTRLVQGFDANLRQELVQLTFC 819
+ + ++ ++ L + + I++ +Q + + + + + L+ + F
Sbjct: 813 RAEHIAFTSIIKSLNSMKEALSFLMVLIEEIQI-NQTNFKEIFEFLSLSNQVNLLTVKFK 871
Query: 820 QLVC-SEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVE 878
L+ + + L L+S+++ G G++D I+ L+ C S+ +D F A+E
Sbjct: 872 DLLLPNRDVKNLVKDLLSSIINKNI-LTG-GSIDLIASSLQTRCGSFCSTNDVFIFKAIE 929
Query: 879 CLERAAVTS--DSEEKENLAREAFNFLSKVPESADLRTVCRRFE---DLRFYEAVVRLPL 933
L +A D++ K + A + ES L + DL FY V + L
Sbjct: 930 NLTKAKNIGFRDTDLKNKCLKNAVLLFEEAYESLTLENIENSINIMLDLEFYAGAVGMLL 989
Query: 934 QKAQALDP----AGDAFNDQIDAAT--REYALVQRQQ--CYEIITSAL 973
AQ + FN D+A R+ A +++++ Y++I + L
Sbjct: 990 NIAQKVGNNVKVPSLTFNQDDDSAPLKRDIAEIEKKKKSLYDLIFNIL 1037
Score = 47 (21.6 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 889 SEEKENLAREAFNFLSKVPESADL 912
SEE +N+A EA N+ K+ +DL
Sbjct: 1207 SEENKNIATEALNY--KILSISDL 1228
Score = 45 (20.9 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 504 LEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRIVVFSTMG 547
LE G+E E+C + G ST + R+ ++FST G
Sbjct: 633 LEENGYE---ETCSSLLYLACSYGQYSTSDMYKRKAQILFSTCG 673
Score = 38 (18.4 bits), Expect = 5.8e-16, Sum P(3) = 5.8e-16
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 1227 LSLDLKSITQLYNEYAVPFELWEICLEMLYFANY 1260
L+ + SI+ L+N Y +++ L + ++Y
Sbjct: 1218 LNYKILSISDLFNNYTDTLGYYDLSLLIFKVSDY 1251
Score = 37 (18.1 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 1264 ADSSIIRETWARLIDQALSKGGIAEACSVL 1293
AD I++ +I+ L + G E CS L
Sbjct: 617 ADQ-ILKSLKDEVIENFLEENGYEETCSSL 645
>SGD|S000000907 [details] [associations]
symbol:NUP157 "Subunit of the inner ring of the nuclear pore
complex (NPC)" species:4932 "Saccharomyces cerevisiae" [GO:0051028
"mRNA transport" evidence=IEA] [GO:0000972 "transcription-dependent
tethering of RNA polymerase II gene DNA at nuclear periphery"
evidence=IMP] [GO:0016021 "integral to membrane" evidence=ISM]
[GO:0005643 "nuclear pore" evidence=IEA;IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA;IC] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0051292 "nuclear pore complex assembly" evidence=IGI]
[GO:0044611 "nuclear pore inner ring" evidence=IDA] [GO:0006810
"transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0017056 "structural constituent of nuclear pore"
evidence=IEA;IGI] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IGI;IMP;IPI] [GO:0000973 "posttranscriptional tethering of
RNA polymerase II gene DNA at nuclear periphery" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR004870
SGD:S000000907 GO:GO:0007094 GO:GO:0015031 GO:GO:0031965
GO:GO:0006913 EMBL:BK006939 EMBL:U18839 GO:GO:0051028 GO:GO:0051292
TCDB:9.A.14.1.1 GO:GO:0000973 GO:GO:0017056 eggNOG:COG5308
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 GeneTree:ENSGT00390000016532 PIR:S50608
RefSeq:NP_011031.1 ProteinModelPortal:P40064 SMR:P40064
DIP:DIP-846N IntAct:P40064 MINT:MINT-385200 STRING:P40064
PaxDb:P40064 PeptideAtlas:P40064 DNASU:856842 EnsemblFungi:YER105C
GeneID:856842 KEGG:sce:YER105C CYGD:YER105c HOGENOM:HOG000246581
OrthoDB:EOG41ZJJZ NextBio:983159 Genevestigator:P40064
GermOnline:YER105C GO:GO:0044611 Uniprot:P40064
Length = 1391
Score = 137 (53.3 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 65/287 (22%), Positives = 124/287 (43%)
Query: 86 GIFPEIRRAWASVDNSLFLWRFDKW-DGQCPEYTGEEQVICAVGLAKSKPGIFVEAIQYL 144
GIF E+ W + DN L LW + + C + E I V L K P FV +++ L
Sbjct: 164 GIFLELNYCWITSDNKLILWNINNSSEYHCIDEI--EHTILKVKLVKPSPNTFVSSVENL 221
Query: 145 LILATPVELILVGVCCSGAGDGTDPYAEISLQPLPEYTVPSDGVTMTCITCTDK-GRILL 203
LI+AT ++ ++ + + D T E+++ V G ++ I ++ G+I
Sbjct: 222 LIVATLFDIYILTISFN---DRTH---ELNIFNTG-LKVNVTGFNVSNIISYERTGQIFF 274
Query: 204 AGR-DG-NIYELLYTTGSGWYK-RCRKVCHT-AGVGNVISRWIVPNVFRFGAVDPIVE-- 257
G DG N++EL Y + + K+C T + + N++ ++P++ + ++E
Sbjct: 275 TGATDGVNVWELQYNCSENLFNSKSNKICLTKSNLANLLPTKLIPSIPGGKLIQKVLEGD 334
Query: 258 ----------LVFDNERQLLYARTEEMKLQVFVLGPNG-DGPLKKVAEERNLFNQRDTHH 306
L D R +L+ + + ++ +++ NG GP+ L +
Sbjct: 335 AGTEEETISQLEVDQSRGVLHTLSTKSIVRSYLITSNGLVGPV--------LIDAAHIRR 386
Query: 307 GGRQTTGQRAPHRSTKP-SVVSISPLSTLESKWLHLVAVLSDGRRMY 352
G + +P S + + I +S E+ L L + + G R+Y
Sbjct: 387 GMNALGVKNSPLLSNRAFKIAKIVSISMCENNDLFLAVITTTGVRLY 433
Score = 74 (31.1 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 1190 LETSVDMSESTQNGSAPDSSSTTDANYAKIVREKAKELSLDLKS----ITQLYNEYAVPF 1245
++ S ++ E S D N +I + K+L+L L ++ L+N+ A P
Sbjct: 1154 VQLSENIHELFDIASIQDDLLNLVRNETRIDEDYRKQLTLKLNGRVLPLSDLFNDCADPL 1213
Query: 1246 ELWEICLEMLYFANYTGDADSSIIRETWARLID 1278
+ +EI L + + + D +I+ W RL+D
Sbjct: 1214 DYYEIKLRIFKVSQFK---DEKVIQGEWNRLLD 1243
Score = 73 (30.8 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 32/154 (20%), Positives = 65/154 (42%)
Query: 530 STQHILPRRRIVVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMC 589
++Q+ ++ V ++ + + P ++ L E P F + +G EA +
Sbjct: 591 ASQYSAEPLKVAVLTSNALEIYCYRTPDEVFESLIENPLP------FIHSYGLSEACSTA 644
Query: 590 LMLAARIVHSENLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQ 649
L LA + SE++ S+A+A F + G+ +++ ++ + ++
Sbjct: 645 LYLACKFNKSEHIKSSALA------FFSAGIPGVVEIKPKSSRESGSVPPISQNLFDKSG 698
Query: 650 EAEP-VFSGAYEGLCLCASRLLFPLWELPVMVVK 682
E + V S + G L +RL +WE V V K
Sbjct: 699 ECDGIVLSPRFYGSALLITRLFSQIWEERVFVFK 732
Score = 53 (23.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 33/143 (23%), Positives = 59/143 (41%)
Query: 463 RISRALRESVTSLPVEGRMLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGK 522
RI R+ +T L + GR+L ++D+ D A + Y E++ F++S EK
Sbjct: 1182 RIDEDYRKQLT-LKLNGRVLPLSDLFN--DCADPLD--YYEIKLRIFKVSQFKDEKVIQG 1236
Query: 523 LWARGDLSTQHILPRRRIVVFSTMGMMEVVFNRPVDILR--RLFELNSP-----RSILED 575
W R L + P + + + N + I + R ++ P ILE
Sbjct: 1237 EWNRL-LDSMKNAPSPDVGSVGQESFLSSISNTLIRIGKTTRDTDVVFPVHFLMNKILES 1295
Query: 576 FFNRFGAGEAAAMCLMLAARIVH 598
F ++ A + + + L A + H
Sbjct: 1296 FIDKSSAADGSVCSMFLLAGVSH 1318
Score = 44 (20.5 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 29/93 (31%), Positives = 38/93 (40%)
Query: 870 DYKFFLAVECLERAAVTSDS----EEKENLAR------EAFNFLSKVPESADL-RTVCRR 918
D K +ECL RA DS ++K L + E F+ S + +L R R
Sbjct: 1124 DLKLSERIECLARANGLCDSSTSFDQKPALVQLSENIHELFDIASIQDDLLNLVRNETRI 1183
Query: 919 FEDLRFYEAVVRLPLQKAQALDPAGDAFNDQID 951
ED Y + L L + L P D FND D
Sbjct: 1184 DED---YRKQLTLKLN-GRVL-PLSDLFNDCAD 1211
Score = 40 (19.1 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 539 RIVVFSTMGMMEVVFNRPVDILRRLFELN-SPRSILEDFFN 578
R+ VF E + + I R E S S+L DFFN
Sbjct: 727 RVFVFKRASKTEKMDAFGISITRPQVEYYLSSISVLADFFN 767
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1410 1326 0.00085 124 3 11 22 0.40 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 627 (67 KB)
Total size of DFA: 554 KB (2251 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 112.32u 0.19s 112.51t Elapsed: 00:00:07
Total cpu time: 112.33u 0.19s 112.52t Elapsed: 00:00:07
Start: Tue May 21 20:42:05 2013 End: Tue May 21 20:42:12 2013