BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000581
(1408 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Y3A|A Chain A, Crystal Structure Of P110beta In Complex With Icsh2 Of
P85beta And The Drug Gdc-0941
Length = 1092
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 1270 YTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG---VAFEQGLMLKTPERVPF 1326
+T S A + Y++G+GDRH+ NI++ + T ++ HID G F+ +K ERVPF
Sbjct: 923 FTLSCAGYCVASYVLGIGDRHSDNIMV-KKTGQLFHIDFGHILGNFKSKFGIKR-ERVPF 980
Query: 1327 RLTRDIIDGM-----GVTGVEGVFRRCCEKTLSVMRTNKEALLTIVEVFI 1371
LT D I + G T G FR+CCE ++R + +T+ + +
Sbjct: 981 ILTYDFIHVIQQGKTGNTEKFGRFRQCCEDAYLILRRHGNLFITLFALML 1030
>pdb|3LS8|A Chain A, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
pdb|3LS8|B Chain B, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
Length = 614
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 137/344 (39%), Gaps = 81/344 (23%)
Query: 1058 REDTNKRIQL---PREIRCLRQLELVPVVTATVPIDCTCQYNEGSFPYFKGLAESVMVMN 1114
R+ N+R+Q E L +EL+P+ P++ + G P L +S ++
Sbjct: 301 RKKKNERLQALLGDNEKMNLSDVELIPL-----PLEPQVKI-RGIIPETATLFKSALM-- 352
Query: 1115 GINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVR 1174
P + DG KY + K G DDLRQD ++ Q L++ LR L +
Sbjct: 353 ----PAQLFFKTEDGGKYPVIFKHG-DDLRQDQLILQIISLMDKLLRKE----NLDLKLT 403
Query: 1175 TYKVVPFTPSAGILEWVDGTVPLGDYLI--GSTRN------GGAHGRYGIGDWSFLKCRE 1226
YKV+ + G ++++ +VP+ + L GS +N +G GI
Sbjct: 404 PYKVLATSTKHGFMQFIQ-SVPVAEVLDTEGSIQNFFRKYAPSENGPNGIS--------- 453
Query: 1227 HMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQPAYWFEKRLAYTRSVAASSMVGYIVGL 1286
+ V D Y +S A ++ YI+G+
Sbjct: 454 --AEVMD-----------------------------------TYVKSCAGYCVITYILGV 476
Query: 1287 GDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTGVEGV-- 1344
GDRH N+L+ + T ++ HID G + P L +++++GMG T E
Sbjct: 477 GDRHLDNLLLTK-TGKLFHIDFGYILGRDPKPLPPPMK---LNKEMVEGMGGTQSEQYQE 532
Query: 1345 FRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQR 1388
FR+ C +R +L + + + + AL P K +++
Sbjct: 533 FRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKK 576
>pdb|3IHY|A Chain A, Human Pik3c3 Crystal Structure
pdb|3IHY|B Chain B, Human Pik3c3 Crystal Structure
pdb|3IHY|C Chain C, Human Pik3c3 Crystal Structure
pdb|3IHY|D Chain D, Human Pik3c3 Crystal Structure
pdb|3IHY|E Chain E, Human Pik3c3 Crystal Structure
Length = 600
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 137/344 (39%), Gaps = 81/344 (23%)
Query: 1058 REDTNKRIQL---PREIRCLRQLELVPVVTATVPIDCTCQYNEGSFPYFKGLAESVMVMN 1114
R+ N+R+Q E L +EL+P+ P++ + G P L +S ++
Sbjct: 287 RKKKNERLQALLGDNEKMNLSDVELIPL-----PLEPQVKI-RGIIPETATLFKSALM-- 338
Query: 1115 GINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVR 1174
P + DG KY + K G DDLRQD ++ Q L++ LR L +
Sbjct: 339 ----PAQLFFKTEDGGKYPVIFKHG-DDLRQDQLILQIISLMDKLLRKE----NLDLKLT 389
Query: 1175 TYKVVPFTPSAGILEWVDGTVPLGDYLI--GSTRN------GGAHGRYGIGDWSFLKCRE 1226
YKV+ + G ++++ +VP+ + L GS +N +G GI
Sbjct: 390 PYKVLATSTKHGFMQFIQ-SVPVAEVLDTEGSIQNFFRKYAPSENGPNGIS--------- 439
Query: 1227 HMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQPAYWFEKRLAYTRSVAASSMVGYIVGL 1286
+ V D Y +S A ++ YI+G+
Sbjct: 440 --AEVMD-----------------------------------TYVKSCAGYCVITYILGV 462
Query: 1287 GDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTGVEGV-- 1344
GDRH N+L+ + T ++ HID G + P L +++++GMG T E
Sbjct: 463 GDRHLDNLLLTK-TGKLFHIDFGYILGRDPKPLPPPMK---LNKEMVEGMGGTQSEQYQE 518
Query: 1345 FRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQR 1388
FR+ C +R +L + + + + AL P K +++
Sbjct: 519 FRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKK 562
>pdb|2X6F|A Chain A, The Crystal Structure Of The Drosophila Class Iii Pi3-Kinase
Vps34 In Complex With 3-Methyladenine
pdb|2X6F|B Chain B, The Crystal Structure Of The Drosophila Class Iii Pi3-Kinase
Vps34 In Complex With 3-Methyladenine
pdb|2X6H|A Chain A, The Crystal Structure Of The Drosophila Class Iii Pi3-Kinase
Vps34
pdb|2X6H|B Chain B, The Crystal Structure Of The Drosophila Class Iii Pi3-Kinase
Vps34
pdb|2X6I|A Chain A, The Crystal Structure Of The Drosophila Class Iii Pi3-kinase
Vps34 In Complex With Pik-90
pdb|2X6I|B Chain B, The Crystal Structure Of The Drosophila Class Iii Pi3-kinase
Vps34 In Complex With Pik-90
pdb|2X6J|A Chain A, The Crystal Structure Of The Drosophila Class Iii Pi3-Kinase
Vps34 In Complex With Pik-93
pdb|2X6J|B Chain B, The Crystal Structure Of The Drosophila Class Iii Pi3-Kinase
Vps34 In Complex With Pik-93
pdb|2X6K|A Chain A, The Crystal Structure Of The Drosophila Class Iii Pi3-Kinase
Vps34 In Complex With Pi-103
pdb|2X6K|B Chain B, The Crystal Structure Of The Drosophila Class Iii Pi3-Kinase
Vps34 In Complex With Pi-103
Length = 696
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 54/263 (20%)
Query: 1130 HKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILE 1189
H+Y + K G DDLRQD ++ Q L++ LR R+ +L YKV+ + G L+
Sbjct: 438 HEYAAIFKHG-DDLRQDQLILQMITLMDKLLR--RENLDLKLT--PYKVLATSSKHGFLQ 492
Query: 1190 WVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVL 1249
+VD + + L R G H + R+H C+N
Sbjct: 493 YVDSCT-VAEVL---AREGNIHNFF----------RKH------------HPCDN----- 521
Query: 1250 HYFFLERFLQPAYWFEKRL--AYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHID 1307
Y + Y +S A ++ Y++G+GDRH N+L+ ++ HID
Sbjct: 522 ----------GPYGISAEVMDTYIKSCAGYCVITYLLGVGDRHLDNLLL-TTNGKLFHID 570
Query: 1308 LGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTGVE--GVFRRCCEKTLSVMRTNKEALLT 1365
G + P L++++++ MG E FR+ C +R + +L
Sbjct: 571 FGYILGRDPKPMPPPMK---LSKEMVEAMGGISSEHHHEFRKQCYTAYLHLRRHANVMLN 627
Query: 1366 IVEVFIHDPLYKWALSPLKALQR 1388
+ + + + AL P KA+++
Sbjct: 628 LFSLMVDATVPDIALEPDKAVKK 650
>pdb|1E8X|A Chain A, Structural Insights Into Phoshoinositide 3-Kinase Enzymatic
Mechanism And Signalling
pdb|1E90|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E7V|A Chain A, Structure Determinants Of Phosphoinositide 3-kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8W|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 45/239 (18%)
Query: 1140 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 694 GDDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 749
Query: 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1259
+ N GA + W KC +++K FQ E F
Sbjct: 750 IQQSTVGNTGAFKDEVLSHWLKEKC-----PIEEK---FQAAVERF-------------- 787
Query: 1260 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLM 1317
S A + +++G+GDRH NI+I + T + HID G + + +
Sbjct: 788 -----------VYSCAGYCVATFVLGIGDRHNDNIMISE-TGNLFHIDFGHILGNYKSFL 835
Query: 1318 LKTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 836 GINKERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVCVKAYLALRHHTNLLIILFSMML 894
>pdb|1E7U|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 45/239 (18%)
Query: 1140 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 694 GDDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 749
Query: 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1259
+ N GA + W KC +++K FQ E F
Sbjct: 750 IQQSTVGNTGAFKDEVLSHWLKEKC-----PIEEK---FQAAVERF-------------- 787
Query: 1260 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLM 1317
S A + +++G+GDRH NI+I + T + HID G + + +
Sbjct: 788 -----------VYSCAGYCVATFVLGIGDRHNDNIMISE-TGNLFHIDFGHILGNYKSFL 835
Query: 1318 LKTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 836 GINKERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVCVKAYLALRHHTNLLIILFSMML 894
>pdb|1E8Y|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8Z|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|2A4Z|A Chain A, Crystal Structure Of Human Pi3kgamma Complexed With As604850
pdb|2A5U|A Chain A, Crystal Structure Of Human Pi3kgamma Complexed With As605240
pdb|2CHW|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role For
P110 Alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-39
pdb|2CHX|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role For
P110alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-90
pdb|2CHZ|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role For
P110alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-93
pdb|3DPD|A Chain A, Achieving Multi-Isoform Pi3k Inhibition In A Series Of
Substituted 3,4-Dihydro-2h-Benzo[1,4]oxazines
pdb|2V4L|A Chain A, Complex Of Human Phosphoinositide 3-kinase Catalytic Subunit
Gamma (p110 Gamma) With Pik-284
pdb|3IBE|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Bound To
Pi3 Kinase Gamma
pdb|3LJ3|A Chain A, Pi3-Kinase-Gamma With A Pyrrolopyridine-Benzofuran Inhibitor
pdb|3ML8|A Chain A, Discovery Of The Highly Potent Pi3kMTOR DUAL INHIBITOR PF-0
Through Structure Based Drug Design
pdb|3ML9|A Chain A, Discovery Of The Highly Potent Pi3kMTOR DUAL INHIBITOR PF-0
Through Structure Based Drug Design
pdb|3MJW|A Chain A, Pi3 Kinase Gamma With A Benzofuranone Inhibitor
pdb|3P2B|A Chain A, Crystal Structure Of Pi3k Gamma With
3-(2-Morpholino-6-(Pyridin-3-
Ylamino)pyrimidin-4-Yl)phenol
pdb|3SD5|A Chain A, Crystal Structure Of Pi3k Gamma With
5-(2,4-Dimorpholinopyrimidin-6-
Yl)-4-(Trifluoromethyl)pyridin-2-Amine
pdb|3TJP|A Chain A, Crystal Structure Of Pi3k Gamma With
N6-(3,4-Dimethoxyphenyl)-2-
Morpholino-[4,5'-Bipyrimidine]-2',6-Diamine
pdb|4FUL|A Chain A, Pi3 Kinase Gamma Bound To A Pyrmidine Inhibitor
Length = 966
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 45/239 (18%)
Query: 1140 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 693 GDDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 748
Query: 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1259
+ N GA + W + S ++K FQ E F
Sbjct: 749 IQQSTVGNTGAFKDEVLNHW-----LKEKSPTEEK---FQAAVERF-------------- 786
Query: 1260 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLM 1317
S A + +++G+GDRH NI+I + T + HID G + + +
Sbjct: 787 -----------VYSCAGYCVATFVLGIGDRHNDNIMITE-TGNLFHIDFGHILGNYKSFL 834
Query: 1318 LKTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 835 GINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 893
>pdb|3QAQ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Triazine-Benzimidazole 1
pdb|3QAR|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Triazine-Benzimidazole 32
pdb|3QJZ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Benzothiazole 1
pdb|3QK0|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Benzothiazole 82
pdb|3S2A|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With A Quinoline
Inhibitor
pdb|4FHJ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Imidazopyridine 2
pdb|4F1S|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A
Pyridyl- Triazine-Sulfonamide Inhibitor
pdb|4FLH|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With Amg511
pdb|4FJY|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Quinoline-Indoline Inhibitor 24f
pdb|4FJZ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Pyrrolo-Pyridine Inhibitor 63
Length = 960
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 45/239 (18%)
Query: 1140 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 693 GDDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 748
Query: 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1259
+ N GA + W + S ++K FQ E F
Sbjct: 749 IQQSTVGNTGAFKDEVLNHW-----LKEKSPTEEK---FQAAVERF-------------- 786
Query: 1260 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLM 1317
S A + +++G+GDRH NI+I + T + HID G + + +
Sbjct: 787 -----------VYSCAGYCVATFVLGIGDRHNDNIMITE-TGNLFHIDFGHILGNYKSFL 834
Query: 1318 LKTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 835 GINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 893
>pdb|4DK5|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A
Pyridyl- Triazine Inhibitor
Length = 959
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 45/239 (18%)
Query: 1140 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 692 GDDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 747
Query: 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1259
+ N GA + W + S ++K FQ E F
Sbjct: 748 IQQSTVGNTGAFKDEVLNHW-----LKEKSPTEEK---FQAAVERF-------------- 785
Query: 1260 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLM 1317
S A + +++G+GDRH NI+I + T + HID G + + +
Sbjct: 786 -----------VYSCAGYCVATFVLGIGDRHNDNIMITE-TGNLFHIDFGHILGNYKSFL 833
Query: 1318 LKTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 834 GINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 892
>pdb|3ENE|A Chain A, Complex Of Pi3k Gamma With An Inhibitor
Length = 959
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 45/239 (18%)
Query: 1140 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 692 GDDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 747
Query: 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1259
+ N GA + W + S ++K FQ E F
Sbjct: 748 IQQSTVGNTGAFKDEVLNHW-----LKEKSPTEEK---FQAAVERF-------------- 785
Query: 1260 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLM 1317
S A + +++G+GDRH NI+I + T + HID G + + +
Sbjct: 786 -----------VYSCAGYCVATFVLGIGDRHNDNIMITE-TGNLFHIDFGHILGNYKSFL 833
Query: 1318 LKTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 834 GINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 892
>pdb|3L54|A Chain A, Structure Of Pi3k Gamma With Inhibitor
Length = 966
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 91/238 (38%), Gaps = 45/238 (18%)
Query: 1141 DDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGDY 1200
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 694 DDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKI 749
Query: 1201 LIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQP 1260
+ N GA + W + S ++K FQ E F
Sbjct: 750 QQSTVGNTGAFKDEVLNHW-----LKEKSPTEEK---FQAAVERF--------------- 786
Query: 1261 AYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLML 1318
S A + +++G+GDRH NI+I + T + HID G + + +
Sbjct: 787 ----------VYSCAGYCVATFVLGIGDRHNDNIMITE-TGNLFHIDFGHILGNYKSFLG 835
Query: 1319 KTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 836 INKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDVCVKAYLALRHHTNLLIILFSMML 893
>pdb|1HE8|A Chain A, Ras G12v-Pi 3-Kinase Gamma Complex
Length = 965
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 45/239 (18%)
Query: 1140 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 692 GDDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 747
Query: 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1259
+ N GA + W + S ++K FQ E F
Sbjct: 748 IQQSTVGNTGAFKDEVLNHW-----LKEKSPTEEK---FQAAVERF-------------- 785
Query: 1260 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLM 1317
S A + +++G+GDRH NI+I + T + HID G + + +
Sbjct: 786 -----------VYSCAGYCVATFVLGIGDRHNDNIMITE-TGNLFHIDFGHILGNYKSFL 833
Query: 1318 LKTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 834 GINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 892
>pdb|3APC|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5132799
pdb|3APD|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5108134
pdb|3APF|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5039699
Length = 966
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 45/239 (18%)
Query: 1140 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 699 GDDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 754
Query: 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1259
+ N GA + W + S ++K FQ E F
Sbjct: 755 IQQSTVGNTGAFKDEVLNHW-----LKEKSPTEEK---FQAAVERF-------------- 792
Query: 1260 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLM 1317
S A + +++G+GDRH NI+I + T + HID G + + +
Sbjct: 793 -----------VYSCAGYCVATFVLGIGDRHNDNIMITE-TGNLFHIDFGHILGNYKSFL 840
Query: 1318 LKTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 841 GINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 899
>pdb|3DBS|A Chain A, Structure Of Pi3k Gamma In Complex With Gdc0941
pdb|3L13|A Chain A, Crystal Structures Of Pan-Pi3-Kinase And Dual
Pan-Pi3-KinaseMTOR Inhibitors
pdb|4AOF|A Chain A, Selective Small Molecule Inhibitor Discovered By
Chemoproteomic Assay Platform Reveals Regulation Of Th17
Cell Differentiation By Pi3kgamma
Length = 960
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 45/239 (18%)
Query: 1140 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 693 GDDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 748
Query: 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1259
+ N GA + W + S ++K FQ E F
Sbjct: 749 IQQSTVGNTGAFKDEVLNHW-----LKEKSPTEEK---FQAAVERF-------------- 786
Query: 1260 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLM 1317
S A + +++G+GDRH NI+I + T + HID G + + +
Sbjct: 787 -----------VYSCAGYCVATFVLGIGDRHNDNIMITE-TGNLFHIDFGHILGNYKSFL 834
Query: 1318 LKTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 835 GINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 893
>pdb|3CST|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In
Complex With Organoruthenium Inhibitor E5e2
pdb|3CSF|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In
Complex With Organoruthenium Inhibitor Dw2
pdb|3L16|A Chain A, Discovery Of (Thienopyrimidin-2-Yl)aminopyrimidines As
Potent, Selective, And Orally Available Pan-Pi3-Kinase
And Dual Pan-Pi3- KinaseMTOR INHIBITORS FOR THE TREATMENT
OF CANCER
pdb|3L17|A Chain A, Discovery Of (Thienopyrimidin-2-Yl)aminopyrimidines As
Potent, Selective, And Orally Available Pan-Pi3-Kinase
And Dual Pan-Pi3- KinaseMTOR INHIBITORS FOR THE TREATMENT
OF CANCER
pdb|3L08|A Chain A, Structure Of Pi3k Gamma With A Potent Inhibitor: Gsk2126458
pdb|3OAW|A Chain A, 4-Methylpteridineones As Orally Active And Selective
Pi3kMTOR DUAL Inhibitors
pdb|3PRE|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding Scaffold
(Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3PRZ|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding Scaffold
(Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3PS6|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding Scaffold
(Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3R7Q|A Chain A, Structure-Based Design Of Thienobenzoxepin Inhibitors Of
Pi3- Kinase
pdb|3R7R|A Chain A, Structure-Based Design Of Thienobenzoxepin Inhibitors Of
Pi3-Kinase
pdb|3ZVV|A Chain A, Fragment Bound To Pi3kinase Gamma
pdb|3ZW3|A Chain A, Fragment Based Discovery Of A Novel And Selective Pi3 Kinase
Inhibitor
pdb|3TL5|A Chain A, Discovery Of Gdc-0980: A Potent, Selective, And Orally
Available Class I Phosphatidylinositol 3-Kinase
(Pi3k)MAMMALIAN TARGET OF RAPAMYCIN (Mtor) Kinase
Inhibitor For The Treatment Of Cancer
pdb|3T8M|A Chain A, Rational Design Of Pi3k-Alpha Inhibitors That Exhibit
Selectivity Over The Pi3k-Beta Isoform
pdb|4GB9|A Chain A, Potent And Highly Selective Benzimidazole Inhibitors Of
Pi3k-Delta
pdb|4G11|A Chain A, X-Ray Structure Of Pi3k-Gamma Bound To A 4-(Morpholin-4-Yl)-
(6-Oxo-1, 6-Dihydropyrimidin-2-Yl)amide Inhibitor
pdb|4HLE|A Chain A, Compound 21 (1-alkyl-substituted 1,2,4-triazoles)
Length = 966
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 45/239 (18%)
Query: 1140 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 693 GDDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 748
Query: 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1259
+ N GA + W + S ++K FQ E F
Sbjct: 749 IQQSTVGNTGAFKDEVLNHW-----LKEKSPTEEK---FQAAVERF-------------- 786
Query: 1260 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLM 1317
S A + +++G+GDRH NI+I + T + HID G + + +
Sbjct: 787 -----------VYSCAGYCVATFVLGIGDRHNDNIMITE-TGNLFHIDFGHILGNYKSFL 834
Query: 1318 LKTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 835 GINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 893
>pdb|3NZS|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And
-Pyridine Inhibitors Of Pi3-Kinase
pdb|3NZU|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And
-Pyridine Inhibitors Of Pi3-Kinase
Length = 954
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 45/239 (18%)
Query: 1140 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 689 GDDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 744
Query: 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1259
+ N GA + W + S ++K FQ E F
Sbjct: 745 IQQSTVGNTGAFKDEVLNHW-----LKEKSPTEEK---FQAAVERF-------------- 782
Query: 1260 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLM 1317
S A + +++G+GDRH NI+I + T + HID G + + +
Sbjct: 783 -----------VYSCAGYCVATFVLGIGDRHNDNIMITE-TGNLFHIDFGHILGNYKSFL 830
Query: 1318 LKTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 831 GINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 889
>pdb|4ANV|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 45/239 (18%)
Query: 1140 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 697 GDDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 752
Query: 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1259
+ N GA + W + S ++K FQ E F
Sbjct: 753 IQQSTVGNTGAFKDEVLNHW-----LKEKSPTEEK---FQAAVERF-------------- 790
Query: 1260 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLM 1317
S A + +++G+GDRH NI+I + T + HID G + + +
Sbjct: 791 -----------VYSCAGYCVATFVLGIGDRHNDNIMITE-TGNLFHIDFGHILGNYKSFL 838
Query: 1318 LKTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 839 GINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 897
>pdb|4ANU|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors.
pdb|4ANW|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 45/239 (18%)
Query: 1140 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 697 GDDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 752
Query: 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1259
+ N GA + W + S ++K FQ E F
Sbjct: 753 IQQSTVGNTGAFKDEVLNHW-----LKEKSPTEEK---FQAAVERF-------------- 790
Query: 1260 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLM 1317
S A + +++G+GDRH NI+I + T + HID G + + +
Sbjct: 791 -----------VYSCAGYCVATFVLGIGDRHNDNIMITE-TGNLFHIDFGHILGNYKSFL 838
Query: 1318 LKTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 839 GINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 897
>pdb|4ANX|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 90/239 (37%), Gaps = 45/239 (18%)
Query: 1140 NDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199
DDLRQD ++ Q ++ + +T L + Y + G++E V +
Sbjct: 697 GDDLRQDMLILQILRIMESIW----ETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAK 752
Query: 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQ 1259
+ N GA + W + S ++K FQ E F
Sbjct: 753 IQQSTVGNTGAFKDEVLNHW-----LKEKSPTEEK---FQAAVERF-------------- 790
Query: 1260 PAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLM 1317
S A + +++G+GDRH NI+I + T + HID G + +
Sbjct: 791 -----------VYSCAGYCVATFVLGIGDRHNDNIMITE-TGNLFHIDFGHINGNYKSFL 838
Query: 1318 LKTPERVPFRLTRDIIDGMGVTGVEGV-----FRRCCEKTLSVMRTNKEALLTIVEVFI 1371
ERVPF LT D + MG +G + F+ C K +R + L+ + + +
Sbjct: 839 GINKERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 897
>pdb|4AJW|A Chain A, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors For
The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
pdb|4AJW|B Chain B, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors For
The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
Length = 934
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 1270 YTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLK---TPERVPF 1326
+T S A + Y++G+GDRH+ NI+I + + ++ HID G F K ERVPF
Sbjct: 765 FTLSCAGYCVATYVLGIGDRHSDNIMIRE-SGQLFHIDFG-HFLGNFKTKFGINRERVPF 822
Query: 1327 RLTRDIIDGM--GVTGVEGVFRRC---CEKTLSVMR 1357
LT D + + G T F R CE+ +++R
Sbjct: 823 ILTYDFVHVIQQGKTNNSEKFERFRGYCERAYTILR 858
>pdb|2WXF|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Pik-39.
pdb|2WXG|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw13.
pdb|2WXH|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw14.
pdb|2WXI|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Sw30.
pdb|2WXJ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink654.
pdb|2WXK|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink666.
pdb|2WXL|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Zstk474.
pdb|2WXM|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Dl06.
pdb|2WXN|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Dl07.
pdb|2WXO|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As5.
pdb|2WXP|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Gdc-0941.
pdb|2WXQ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As15.
pdb|2WXR|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta.
pdb|2X38|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ic87114
Length = 940
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 1270 YTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLK---TPERVPF 1326
+T S A + Y++G+GDRH+ NI+I + + ++ HID G F K ERVPF
Sbjct: 771 FTLSCAGYCVATYVLGIGDRHSDNIMIRE-SGQLFHIDFG-HFLGNFKTKFGINRERVPF 828
Query: 1327 RLTRDIIDGM--GVTGVEGVFRRC---CEKTLSVMR 1357
LT D + + G T F R CE+ +++R
Sbjct: 829 ILTYDFVHVIQQGKTNNSEKFERFRGYCERAYTILR 864
>pdb|3ZIM|A Chain A, Discovery Of A Potent And Isoform-selective Targeted
Covalent Inhibitor Of The Lipid Kinase Pi3kalpha
Length = 940
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 1270 YTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLMLKTPERVPFR 1327
+TRS A + +I+G+GDRH NI++ + ++ HID G + ++ ERVPF
Sbjct: 791 FTRSCAGYCVATFILGIGDRHNSNIMV-KDDGQLFHIDFGHFLDHKKKKFGYKRERVPFV 849
Query: 1328 LTRDII 1333
LT+D +
Sbjct: 850 LTQDFL 855
>pdb|3HIZ|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With
Nish2 Of P85alpha
Length = 1096
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 1270 YTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLMLKTPERVPFR 1327
+TRS A + +I+G+GDRH NI++ + ++ HID G + ++ ERVPF
Sbjct: 925 FTRSCAGYCVATFILGIGDRHNSNIMV-KDDGQLFHIDFGHFLDHKKKKFGYKRERVPFV 983
Query: 1328 LTRDII 1333
LT+D +
Sbjct: 984 LTQDFL 989
>pdb|3HHM|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With
Nish2 Of P85alpha And The Drug Wortmannin
Length = 1091
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 1270 YTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLMLKTPERVPFR 1327
+TRS A + +I+G+GDRH NI++ + ++ HID G + ++ ERVPF
Sbjct: 920 FTRSCAGYCVATFILGIGDRHNSNIMV-KDDGQLFHIDFGHFLDHKKKKFGYKRERVPFV 978
Query: 1328 LTRDII 1333
LT+D +
Sbjct: 979 LTQDFL 984
>pdb|4A55|A Chain A, Crystal Structure Of P110alpha In Complex With Ish2 Of
P85alpha And The Inhibitor Pik-108
Length = 1096
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 1270 YTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLMLKTPERVPFR 1327
+TRS A + +I+G+GDRH NI++ + ++ HID G + ++ ERVPF
Sbjct: 925 FTRSCAGYCVATFILGIGDRHNSNIMV-KDDGQLFHIDFGHFLDHKKKKFGYKRERVPFV 983
Query: 1328 LTRDII 1333
LT+D +
Sbjct: 984 LTQDFL 989
>pdb|2RD0|A Chain A, Structure Of A Human P110alpha/p85alpha Complex
Length = 1096
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 1270 YTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLG--VAFEQGLMLKTPERVPFR 1327
+TRS A + +I+G+GDRH NI++ + ++ HID G + ++ ERVPF
Sbjct: 925 FTRSCAGYCVATFILGIGDRHNSNIMV-KDDGQLFHIDFGHFLDHKKKKFGYKRERVPFV 983
Query: 1328 LTRDII 1333
LT+D +
Sbjct: 984 LTQDFL 989
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 1211 HGRYGIGDWSFLKCREHMS-NVKDKRIAFQEVCENFRPVLHYF 1252
H R+ D FL E ++ N+K + ++C NF P++ YF
Sbjct: 167 HKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYF 209
>pdb|3OM0|A Chain A, Crystal Structure Of The Gluk5 (Ka2) Atd Crystallographic
Dimer At 1.4 Angstrom Resolution
pdb|3OM1|A Chain A, Crystal Structure Of The Gluk5 (Ka2) Atd Dimer At 1.7
Angstrom Resolution
pdb|3OM1|B Chain B, Crystal Structure Of The Gluk5 (Ka2) Atd Dimer At 1.7
Angstrom Resolution
pdb|3QLU|A Chain A, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD DIMER
ASSEMBLY
pdb|3QLU|B Chain B, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD DIMER
ASSEMBLY
pdb|3QLV|A Chain A, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
pdb|3QLV|B Chain B, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
pdb|3QLV|E Chain E, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
pdb|3QLV|G Chain G, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
pdb|3QLV|I Chain I, Crystal Structure Of The Gluk2GLUK5 (GLUR6KA2) ATD
TETRAMER ASSEMBLY
Length = 393
Score = 30.8 bits (68), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 829 ASNEWQAAMRLRKH-KTIELEALIKRLKSSTKGEKTDYSIKIQELQKQ 875
++N W L + + +E + L R++ ++KG++T+Y+++I E +Q
Sbjct: 317 SANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQ 364
>pdb|1Y5Y|A Chain A, Structure Of The Tetrahydromethanopterin Dependent
Formaldehyde- Activating Enzyme (fae) From
Methylobacterium Extorquens Am1
pdb|1Y5Y|B Chain B, Structure Of The Tetrahydromethanopterin Dependent
Formaldehyde- Activating Enzyme (fae) From
Methylobacterium Extorquens Am1
pdb|1Y5Y|C Chain C, Structure Of The Tetrahydromethanopterin Dependent
Formaldehyde- Activating Enzyme (fae) From
Methylobacterium Extorquens Am1
pdb|1Y5Y|D Chain D, Structure Of The Tetrahydromethanopterin Dependent
Formaldehyde- Activating Enzyme (fae) From
Methylobacterium Extorquens Am1
pdb|1Y5Y|E Chain E, Structure Of The Tetrahydromethanopterin Dependent
Formaldehyde- Activating Enzyme (fae) From
Methylobacterium Extorquens Am1
pdb|1Y60|A Chain A, Structure Of The Tetrahydromethanopterin Dependent
Formaldehyde- Activating Enzyme (Fae) From
Methylobacterium Extorquens Am1 With Bound
5,10-Methylene Tetrahydromethanopterin
pdb|1Y60|B Chain B, Structure Of The Tetrahydromethanopterin Dependent
Formaldehyde- Activating Enzyme (Fae) From
Methylobacterium Extorquens Am1 With Bound
5,10-Methylene Tetrahydromethanopterin
pdb|1Y60|C Chain C, Structure Of The Tetrahydromethanopterin Dependent
Formaldehyde- Activating Enzyme (Fae) From
Methylobacterium Extorquens Am1 With Bound
5,10-Methylene Tetrahydromethanopterin
pdb|1Y60|D Chain D, Structure Of The Tetrahydromethanopterin Dependent
Formaldehyde- Activating Enzyme (Fae) From
Methylobacterium Extorquens Am1 With Bound
5,10-Methylene Tetrahydromethanopterin
pdb|1Y60|E Chain E, Structure Of The Tetrahydromethanopterin Dependent
Formaldehyde- Activating Enzyme (Fae) From
Methylobacterium Extorquens Am1 With Bound
5,10-Methylene Tetrahydromethanopterin
Length = 169
Score = 30.8 bits (68), Expect = 6.1, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 736 GQHEMAINLAKYISENYESNEEAPDVYRLVGKWLAESRSSNSRIILENYLKPAVSFSEDQ 795
QH +A+ + ++E +EA D+Y LVG ++ + +++I NY +S
Sbjct: 86 AQHGVAMAVQDAVAEGIIPADEADDLYVLVGVFIHWEAADDAKIQKYNYEATKLSIQRAV 145
Query: 796 RTTDKKSI---ERQCQTH 810
K S+ +R+ TH
Sbjct: 146 NGEPKASVVTEQRKSATH 163
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 565 RKLKHSKQELVLSVACASEESTEYIYSAIVKLQILCHLGVAWDIRWKSSGE--SINIYPE 622
R KH+++ L L A + ST +Y +++L A D G + ++ P
Sbjct: 177 RNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPN 236
Query: 623 KQKIVSEPVIPTVGQLSWLNTEWSSILKRTQLHMNLL 659
+ T+G LS + W+ I+ + ++H N+
Sbjct: 237 GHFL-------TIGLLSGIQVNWAEIVTKAKVHANIF 266
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,623,846
Number of Sequences: 62578
Number of extensions: 1667414
Number of successful extensions: 3844
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 3801
Number of HSP's gapped (non-prelim): 42
length of query: 1408
length of database: 14,973,337
effective HSP length: 111
effective length of query: 1297
effective length of database: 8,027,179
effective search space: 10411251163
effective search space used: 10411251163
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)