Query 000581
Match_columns 1408
No_of_seqs 326 out of 1412
Neff 7.0
Searched_HMMs 29240
Date Tue Mar 26 17:16:40 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000581.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_352-355//hhsearch_pdb/000581hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x6h_A GH13170P, VPS34, phosph 1.0 1 1 538.1 33.2 366 972-1401 277-663 (696)
2 1e7u_A Phosphatidylinositol 3- 1.0 1 1 534.5 29.3 432 896-1400 446-921 (961)
3 2y3a_A Phosphatidylinositol-4, 1.0 1 1 531.5 33.7 433 895-1401 592-1058(1092)
4 2wxf_A Phosphatidylinositol-4, 1.0 1 1 530.9 32.1 433 895-1401 439-906 (940)
5 3ls8_A Phosphatidylinositol 3- 1.0 1 1 528.7 29.4 363 973-1401 208-589 (614)
6 3hhm_A Phosphatidylinositol-4, 1.0 1 1 512.2 26.6 430 896-1400 586-1056(1091)
7 2xpi_A Anaphase-promoting comp 1.0 1 1 31.5 25.2 66 679-752 304-369 (597)
8 1w3b_A UDP-N-acetylglucosamine 1.0 1 1 28.3 26.9 64 680-751 203-266 (388)
9 2xpi_A Anaphase-promoting comp 1.0 1 1 26.6 26.9 28 408-435 203-230 (597)
10 3ieg_A DNAJ homolog subfamily 1.0 1 1 26.2 29.9 21 413-433 11-31 (359)
No 1
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=1.00 E-value=1 Score=538.08 Aligned_cols=366 Identities=21% Similarity=0.346 Sum_probs=277.4
Q ss_pred HHHHHHHHHHHHHHCCH---HHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHH
Q ss_conf 99999999999983783---58999987202763000000132013224699999999999974------6779999999
Q 000581 972 QFALVSLVKKMAIDHPY---HTIFQLLALANGDRIKDKQRSRNSFVVDMDKKLAAENLLEELSS------YHGAIIRQMK 1042 (1408)
Q Consensus 972 ~~~L~~Ll~~i~~~hP~---h~ly~l~~l~~~~~~~~~~~~~~~~~v~~~~~~~a~~il~~l~~------~~~~~~~~~~ 1042 (1408)
...|..+|++.+...|. +.+|.|.+....+.... .+...... .-....+.++..+.. .....+....
T Consensus 277 ~s~La~FLl~rA~~n~~i~h~l~W~L~~e~~~~~~~~---~~~~~~~~-~~~~il~~~l~~l~~g~~~~~~~~~~l~~Q~ 352 (696)
T 2x6h_A 277 PANLCTFLIQRACTNATLANYFYWYLSIEVEEVESVR---KQDERAHD-MYAMVLKMFLKVLENGNFNLRGIFYNLRKQR 352 (696)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHHHHHHHCC--------CCHHHHHH-HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCC---CCCCHHHH-HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 7779999999985286668999987571234763112---11306899-9999999999986334753189999999999
Q ss_pred HHHHHHHHHHHHHCC-CCCCCCCCC-CHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EEEEECCCC
Q ss_conf 999999999731102-333233455-403331002--466555544456789987666888662011256-389824888
Q 000581 1043 QMVDVYIKLAELETR-REDTNKRIQ-LPREIRCLR--QLELVPVVTATVPIDCTCQYNEGSFPYFKGLAE-SVMVMNGIN 1117 (1408)
Q Consensus 1043 ~l~~~~~~la~~~~~-~~~~~~~~~-l~~~l~~l~--~l~~~p~~t~~lp~~~~~~y~~~~~~~i~~f~~-~~~v~~s~~ 1117 (1408)
.+++.+.+++..... +....+++. +...+.... ...+..+....+|.+| .++|.+|.+ .+.|++|++
T Consensus 353 ~~~~~L~~i~~~ik~~~~~~~~k~e~L~~~L~~~~~~~~~l~~~~~~~lP~~p--------~v~I~~~~~~~~~V~~S~~ 424 (696)
T 2x6h_A 353 RFIDELVKLVKLVAKEPGNRNKKTEKFQKLLAEQDMFKVNFTNFEPIPFPLDP--------EIYITKIVPMRTSLFKSAL 424 (696)
T ss_dssp HHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHSTTSSSSCTTSCCCEECSSCT--------TSEEEEECGGGCEECSSSS
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCC--------CEEEEEEECCEEEECCCCC
T ss_conf 99999999999871168637889999999853211100010237875679998--------7699999437179833046
Q ss_pred CCEEEEEEECC-CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEECCCCCCEEEECCCCCC
Q ss_conf 61499999079-95786643418630136699999999999998508122244420102218871899506788189876
Q 000581 1118 APKVVECFGSD-GHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVP 1196 (1408)
Q Consensus 1118 ~Pk~i~~~gsd-G~~y~~L~K~G~dDlRqD~r~~Qlf~liN~lL~~~~et~rR~L~i~tY~ViPLs~~~GlIE~v~~t~t 1196 (1408)
+|++|+|+|+| |+.|.||+|.| ||+|||+|+||+|++||.+|++++ |+|.+++|+|||+++++||||||++ .|
T Consensus 425 ~P~~l~~~gsD~G~~y~~i~K~g-DDLRQD~rv~Ql~~lmn~il~~~~----~~L~i~~Y~Vipls~~~GLIE~V~s-~t 498 (696)
T 2x6h_A 425 MPAKLTFVTSIAHHEYAAIFKHG-DDLRQDQLILQMITLMDKLLRREN----LDLKLTPYKVLATSSKHGFLQYVDS-CT 498 (696)
T ss_dssp CCEEEEEEETTTTCEEEEEEECS-SCTHHHHHHHHHHHHHHHHHHHTT----CCCCCCCCCEEESSTTCEEEECCCC-EE
T ss_pred CCEEEEEEECCCCCCEEEEEECC-CCCCHHHHHHHHHHHHHHHHHHCC----CCCEEECCEEEECCCCCCEEEECCC-CC
T ss_conf 97489999637887045787437-654216899999999999998479----9837753079963677872345797-55
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH----HHHHHHHH
Q ss_conf 68875210248988877788850257877520143768999999985111138999999808955899----99999897
Q 000581 1197 LGDYLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQPAYWF----EKRLAYTR 1272 (1408)
Q Consensus 1197 l~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~f~~i~~~~~pvl~~~f~~~f~~~~~w~----~~R~~ft~ 1272 (1408)
+++|+... . .+++||.+.|+++..|| ++|.+|++
T Consensus 499 l~~i~~~~-----------------------------------------~-~l~~~f~~~~p~~~~~~~~~~~ar~nF~~ 536 (696)
T 2x6h_A 499 VAEVLARE-----------------------------------------G-NIHNFFRKHHPCDNGPYGISAEVMDTYIK 536 (696)
T ss_dssp HHHHHHHS-----------------------------------------S-SHHHHHHHHSBCTTSSSSBCHHHHHHHHH
T ss_pred HHHHHHHC-----------------------------------------C-HHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 99998706-----------------------------------------7-09999998788962012427999999999
Q ss_pred HHHCCCHHHHEECCCCCCCCEEEEECCCCEEEEEECHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCH--HHHHHH
Q ss_conf 421000234103147889970688348992998432011100477889988872234203303454454230--389999
Q 000581 1273 SVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTGVEGV--FRRCCE 1350 (1408)
Q Consensus 1273 S~A~~SivgyiLgLgDRH~~NILld~~tG~v~HIDfg~~f~~~~~l~~pE~VPFRLTrnlv~~mG~~g~eG~--Fr~~c~ 1350 (1408)
|+|+|||+||||||||||++|||||. ||+++|||||++|+++ +.||+|||||||||+++||+.|+||. |+.+|+
T Consensus 537 SlA~~Svv~YILGlGDRH~~NILid~-tG~v~HIDFG~~f~~~---p~pe~VPFRLT~~mv~~mG~~g~eg~~~Fr~~c~ 612 (696)
T 2x6h_A 537 SCAGYCVITYLLGVGDRHLDNLLLTT-NGKLFHIDFGYILGRD---PKPMPPPMKLSKEMVEAMGGISSEHHHEFRKQCY 612 (696)
T ss_dssp HHHHHHHHHHHHTCCCCCTTTEEECT-TSCEEECCCCSCTTCC---SSSCCCSSCCCHHHHHHTTSSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCCEEEEC-CCCEEEEEEHHHHCCC---CCCCCCCEECCHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 99999999998348889976568807-8998988534553668---8776798631799999838977610899999999
Q ss_pred HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 999999319338999999960398644335917899999997412887212
Q 000581 1351 KTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKAWKAQKMNTKG 1401 (1408)
Q Consensus 1351 ~t~~~LR~~~~~l~~iL~~f~~Dpl~~W~~~~~~~~~~~~~~~~~~~~~~~ 1401 (1408)
.++++||+|++.|++++++|++|++++|...|.+.++..++++.+++++..
T Consensus 613 ~~~~~LR~~~~~il~ll~lml~~~lp~~~~~~~~~i~~l~~rf~l~lseee 663 (696)
T 2x6h_A 613 TAYLHLRRHANVMLNLFSLMVDATVPDIALEPDKAVKKVEENLQLGLTDEE 663 (696)
T ss_dssp HHHHHHHHTHHHHHHHHHHTTTCCCTTTTSSGGGHHHHHHHHHTTTSCHHH
T ss_pred HHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
T ss_conf 999999867899999999997589975466878999999998379999999
No 2
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=1.00 E-value=1 Score=534.53 Aligned_cols=432 Identities=20% Similarity=0.264 Sum_probs=318.4
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHH---HH--C------------CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 999999998335998407888999978---53--0------------587189999999730003744315525777620
Q 000581 896 LALEGYKRCLVIGDKYDVRVVFRLVSL---WF--S------------LSSRQNVIKNMVDTIDEVQSYKFIPLVYQIASR 958 (1408)
Q Consensus 896 ~Ai~~Yl~sL~~~~~~~~~~~~RllsL---Wl--~------------~~~~~~v~~~i~~~l~~vPs~kfl~~ipQLisR 958 (1408)
.|+..+++|+.+.+......+..++.- |- . .-.++.|.....+.+...|...++..+|||+..
T Consensus 446 ~aL~k~l~sv~w~~~~~v~e~~~lL~~~~~W~~~~~~~~~ALeLL~~~f~d~~VR~yAV~~L~~~~d~~l~~YL~QLVQa 525 (961)
T 1e7u_A 446 KAYPKLFSSVKWGQQEIVAKTYQLLAKREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVLHYLLQLVQA 525 (961)
T ss_dssp GGHHHHHTSSCTTCHHHHHHHHHHHHCCHHHHHSCCCHHHHHHTTSTTCCCHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 78878754567899899999999873367777889899999985687689978999999999829999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCH---HHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH---
Q ss_conf 278744344131899999999999983783---58999987202763000000132013224699999999999974---
Q 000581 959 MGSTKDALGLHNFQFALVSLVKKMAIDHPY---HTIFQLLALANGDRIKDKQRSRNSFVVDMDKKLAAENLLEELSS--- 1032 (1408)
Q Consensus 959 L~~~~~~~~~~~f~~~L~~Ll~~i~~~hP~---h~ly~l~~l~~~~~~~~~~~~~~~~~v~~~~~~~a~~il~~l~~--- 1032 (1408)
|.+... ....|..+|.+.+...+. +.+|.|.+....+ .....+. ..+++.+..
T Consensus 526 LkyE~~------~~s~L~~fLl~ra~~n~~i~h~l~W~l~~e~~~~---~~~~~r~------------~~ll~~~l~~~~ 584 (961)
T 1e7u_A 526 VKFEPY------HDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQS---RHYQQRF------------AVILEAYLRGCG 584 (961)
T ss_dssp GGGCSS------SSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC---TTTHHHH------------HHHHHHHHTTSC
T ss_pred HHHCCC------CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC---HHHHHHH------------HHHHHHHHHHCC
T ss_conf 853334------6776999999998618377899998855231578---6689999------------999999986442
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH----HH-HHCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -6779999999999999999731102333233455403----33-10024665555-44456789987666888662011
Q 000581 1033 -YHGAIIRQMKQMVDVYIKLAELETRREDTNKRIQLPR----EI-RCLRQLELVPV-VTATVPIDCTCQYNEGSFPYFKG 1105 (1408)
Q Consensus 1033 -~~~~~~~~~~~l~~~~~~la~~~~~~~~~~~~~~l~~----~l-~~l~~l~~~p~-~t~~lp~~~~~~y~~~~~~~i~~ 1105 (1408)
.....+..-..+++.+.+++..... . ...+..+++ .+ ..+..+..+.+ .+..+|.+|. ..|.+
T Consensus 585 ~~~~~~~~~q~~~~~~L~~i~~~ik~-~-~~~~~~~~~~~~~~l~~~L~~l~~i~vP~~~~lP~dP~--------v~i~~ 654 (961)
T 1e7u_A 585 TAMLHDFTQQVQVIDMLQKVTIDIKS-L-SAEKYDVSSQVISQLKQKLENLQNLNLPQSFRVPYDPG--------LKAGA 654 (961)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSGG-G-GCCSSCCCHHHHHHHHHHHHHHHHTTSCSCEEETTEEE--------EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-H-CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC--------EEEEE
T ss_conf 98999999999999999999999876-4-00002311667999999998642075898765799995--------48987
Q ss_pred C-CCEEEEECCCCCCEEEEEEECCCC-----EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEE
Q ss_conf 2-563898248886149999907995-----7866434186301366999999999999985081222444201022188
Q 000581 1106 L-AESVMVMNGINAPKVVECFGSDGH-----KYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVV 1179 (1408)
Q Consensus 1106 f-~~~~~v~~s~~~Pk~i~~~gsdG~-----~y~~L~K~G~dDlRqD~r~~Qlf~liN~lL~~~~et~rR~L~i~tY~Vi 1179 (1408)
| .+.+.|++|+++|++++++|+||. .|.||+|.| ||+|||+|+||+|++||.+|+++ +|+|.+++|+||
T Consensus 655 i~~~~~~V~~S~~~P~~l~~~g~Dg~~~~~~~~~~i~K~g-DDLRQD~~v~Ql~~lmn~il~~~----~~~L~i~~Y~Vi 729 (961)
T 1e7u_A 655 LVIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHG-DDLRQDMLILQILRIMESIWETE----SLDLCLLPYGCI 729 (961)
T ss_dssp ECGGGCEECSSTTCCEEEEEEESCTTCSCCCCEEEEEEES-SCCHHHHHHHHHHHHHHHHHHHT----TCCCCCCCCCEE
T ss_pred EECCEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECC-CCCCCCHHHHHHHHHHHHHHHHC----CCCEEEEEEEEE
T ss_conf 6334379850257956999972687756677523898458-54434364999999999998635----888288830499
Q ss_pred ECCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHCC
Q ss_conf 718995067881898766887521024898887778885025787752014376899999998511-1138999999808
Q 000581 1180 PFTPSAGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENF-RPVLHYFFLERFL 1258 (1408)
Q Consensus 1180 PLs~~~GlIE~v~~t~tl~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~f~~i~~~~-~pvl~~~f~~~f~ 1258 (1408)
|+++++|+||||+|+.|+++|+.... |... .+ .+++++||.+.++
T Consensus 730 pls~~~GlIE~V~ns~tl~~I~~~~~---g~~~-------------------------------~f~~~~L~~w~~~~~~ 775 (961)
T 1e7u_A 730 STGDKIGMIEIVKDATTIAKIQQSTV---GNTG-------------------------------AFKDEVLSHWLKEKCP 775 (961)
T ss_dssp EEETTEEEEECCSSEEEHHHHHHHHS---CSSS-------------------------------CCCSSHHHHHHHHHCC
T ss_pred ECCCCCCEEEECCCCCCHHHHHHHCC---CCCC-------------------------------CCCHHHHHHHHHHHCC
T ss_conf 87788775776599746999998536---7522-------------------------------2441689999998599
Q ss_pred CCHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCEEEEECCCCEEEEEECHHHHCCCCC-CC-CCCCCCCCCCCCHHHCC
Q ss_conf 95589999999897421000234103147889970688348992998432011100477-88-99888722342033034
Q 000581 1259 QPAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLM-LK-TPERVPFRLTRDIIDGM 1336 (1408)
Q Consensus 1259 ~~~~w~~~R~~ft~S~A~~SivgyiLgLgDRH~~NILld~~tG~v~HIDfg~~f~~~~~-l~-~pE~VPFRLTrnlv~~m 1336 (1408)
++++|+.+|.+|++|+|++||+||||||||||++|||||+ ||+++|||||++|++++. +. .||+|||||||||+++|
T Consensus 776 ~~~~~~~ar~~F~~S~A~ySvv~YILGigDRH~~NILid~-tG~v~HIDFG~~f~~~~~~l~~~pE~vPFRLT~~mv~~m 854 (961)
T 1e7u_A 776 IEEKFQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMISE-TGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVM 854 (961)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEET-TCCEEECCCCCC----------CCCCCSSCCCHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC-CCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 8689999999999988999899897005578876568835-777898853343246865567788889842479999985
Q ss_pred CCCCCC-----CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 544542-----3038999999999931933899999996039864433591789999999741288721
Q 000581 1337 GVTGVE-----GVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKAWKAQKMNTK 1400 (1408)
Q Consensus 1337 G~~g~e-----G~Fr~~c~~t~~~LR~~~~~l~~iL~~f~~Dpl~~W~~~~~~~~~~~~~~~~~~~~~~ 1400 (1408)
|++|++ |.|+.+|+.++++||+|++.|++++++|++||+++|.. ..+.+..++++.+++++.
T Consensus 855 G~~g~e~s~~fg~F~~~c~~~~~~LR~~~~~l~~ll~lm~~~~lp~~~~--~~~i~~lr~rf~l~~se~ 921 (961)
T 1e7u_A 855 GTSGKKTSLHFQKFQDVCVKAYLALRHHTNLLIILFSMMLMTGMPQLTS--KEDIEYIRDALTVGKSEE 921 (961)
T ss_dssp TCCSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSCSSCCC--HHHHHHHHHHTTTTSCHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHHHCCCCCHH
T ss_conf 6567766452789999999999999975899999999984699976586--589999999747999999
No 3
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=1.00 E-value=1 Score=531.45 Aligned_cols=433 Identities=19% Similarity=0.255 Sum_probs=319.6
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC------------CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 999999999833599840788899997853058------------71899999997300037443155257776202787
Q 000581 895 GLALEGYKRCLVIGDKYDVRVVFRLVSLWFSLS------------SRQNVIKNMVDTIDEVQSYKFIPLVYQIASRMGST 962 (1408)
Q Consensus 895 ~~Ai~~Yl~sL~~~~~~~~~~~~RllsLWl~~~------------~~~~v~~~i~~~l~~vPs~kfl~~ipQLisRL~~~ 962 (1408)
..|+.-+++|+.+.+......+..++.-|-..+ .++.|.....+.+...|...++..+|||+..|.+.
T Consensus 592 p~aL~k~l~sv~w~~~~e~~e~~~lL~~W~~i~p~~ALeLL~~~f~d~~VR~yAV~~L~~~~d~~l~~yLpQLVQaLkyE 671 (1092)
T 2y3a_A 592 PQSLPKLLLSIKWNKLEDVAQLQALLQIWPKLPPREALELLDFNYPDQYVREYAVGCLRQMSDEELSQYLLQLVQVLKYE 671 (1092)
T ss_dssp GGGHHHHHHHSCTTCHHHHHHHHHHHHTSCCCCHHHHGGGGSTTCCCTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
T ss_conf 07889998416889988999999997058999999999866865899899999999997399999999999999998606
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCH---HHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH----HHHH
Q ss_conf 44344131899999999999983783---5899998720276300000013201322469999999999997----4677
Q 000581 963 KDALGLHNFQFALVSLVKKMAIDHPY---HTIFQLLALANGDRIKDKQRSRNSFVVDMDKKLAAENLLEELS----SYHG 1035 (1408)
Q Consensus 963 ~~~~~~~~f~~~L~~Ll~~i~~~hP~---h~ly~l~~l~~~~~~~~~~~~~~~~~v~~~~~~~a~~il~~l~----~~~~ 1035 (1408)
.. ....|..+|.+.+...|. +.+|.|.+...... ...+ ...+++.+. ....
T Consensus 672 ~~------~~s~L~~fLl~ra~~n~~i~h~l~W~L~~e~~~~~----~~~r------------~~~lle~~~~~~~~~~~ 729 (1092)
T 2y3a_A 672 PF------LDCALSRFLLERALDNRRIGQFLFWHLRSEVHTPA----VSVQ------------FGVILEAYCRGSVGHMK 729 (1092)
T ss_dssp SS------SSCHHHHHHHHHHTSCSSHHHHHHHHHHHHHTSHH----HHHH------------HHHHHHHHHHHTTTTHH
T ss_pred CC------CCCHHHHHHHHHHHHCHHHHHHHHHHEEECCCCCH----HHHH------------HHHHHHHHHHHCHHHHH
T ss_conf 55------65679999999986485778999977122206915----8999------------99999999842678899
Q ss_pred HHHHHHHHHHHHHHHHHHHHCC---CCCCCCCC-CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EE
Q ss_conf 9999999999999999731102---33323345-5403331002466555544456789987666888662011256-38
Q 000581 1036 AIIRQMKQMVDVYIKLAELETR---REDTNKRI-QLPREIRCLRQLELVPVVTATVPIDCTCQYNEGSFPYFKGLAE-SV 1110 (1408)
Q Consensus 1036 ~~~~~~~~l~~~~~~la~~~~~---~~~~~~~~-~l~~~l~~l~~l~~~p~~t~~lp~~~~~~y~~~~~~~i~~f~~-~~ 1110 (1408)
.+.+ -..+++.+.+++..-.. +....++. .+.+.+........ ++...+|.+| .+.|.+|.+ .+
T Consensus 730 ~l~~-Q~~~~~~L~~is~~ik~~~~~~~r~k~~e~L~~~l~~~~~~~~--~~~~~lP~~P--------~v~I~~~~~~~~ 798 (1092)
T 2y3a_A 730 VLSK-QVEALNKLKTLNSLIKLNAVKLSRAKGKEAMHTCLKQSAYREA--LSDLQSPLNP--------CVILSELYVEKC 798 (1092)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHSTTHHHH--TSSSCCSSCS--------SBCCCCCCGGGC
T ss_pred HHHH-HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHC--CCCCCCCCCC--------CEEEEEEECCCE
T ss_conf 9999-9999999999999985246544378899999998604211213--7898789997--------547888844723
Q ss_pred EEECCCCCCEEEEEEECC--CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEECCCCCCEE
Q ss_conf 982488861499999079--957866434186301366999999999999985081222444201022188718995067
Q 000581 1111 MVMNGINAPKVVECFGSD--GHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGIL 1188 (1408)
Q Consensus 1111 ~v~~s~~~Pk~i~~~gsd--G~~y~~L~K~G~dDlRqD~r~~Qlf~liN~lL~~~~et~rR~L~i~tY~ViPLs~~~GlI 1188 (1408)
.|++|+++|++|+++|+| |+.|.||+|+| ||+|||+|+||+|++||.+|++++ |+|.+++|+|||+++++|||
T Consensus 799 ~V~~S~~~P~rL~~~gsD~~G~~y~~L~K~g-DDLRQD~rv~Ql~~lmn~ll~~~~----~~L~i~~Y~Vipls~~~GLI 873 (1092)
T 2y3a_A 799 KYMDSKMKPLWLVYSSRAFGEDSVGVIFKNG-DDLRQDMLTLQMLRLMDLLWKEAG----LDLRMLPYGCLATGDRSGLI 873 (1092)
T ss_dssp EECSSTTCCEEEEEECTTTSSSEEEEEECCS-SCCHHHHHHHHHHHHHHHHHHHHS----CCCCCCCCCEECCSSSCCEE
T ss_pred EEECCCCCCEEEEEEECCCCCCEEEEEEECC-CCCCHHHHHHHHHHHHHHHHHHCC----CCEEEECCEEEEECCCCCEE
T ss_conf 8803112856999993377886145798448-321124899999999999998489----88188633489845988857
Q ss_pred EECCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 881898766887521024898887778885025787752014376899999998511-1138999999808955899999
Q 000581 1189 EWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENF-RPVLHYFFLERFLQPAYWFEKR 1267 (1408)
Q Consensus 1189 E~v~~t~tl~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~f~~i~~~~-~pvl~~~f~~~f~~~~~w~~~R 1267 (1408)
|||+|+.|+++|+.... +... ...+ .+++++||.+.+ .++.|+.+|
T Consensus 874 E~V~ns~TL~~I~~~~~---~~~~-----------------------------~~~f~~~~L~~~~~~~~-~~~~~~~ar 920 (1092)
T 2y3a_A 874 EVVSTSETIADIQLNSS---NVAA-----------------------------TAAFNKDALLNWLKEYN-SGDDLDRAI 920 (1092)
T ss_dssp ECCTTCCBHHHHHSSSC---TTTT-----------------------------TSCSSTTHHHHHHHHHC-CTHHHHHHH
T ss_pred EECCCCCCHHHHHHHHC---CCHH-----------------------------HHCCCCHHHHHHHHHHC-CHHHHHHHH
T ss_conf 55799745999998635---6202-----------------------------21048467999999769-888899999
Q ss_pred HHHHHHHHCCCHHHHEECCCCCCCCEEEEECCCCEEEEEECHHHHCCCCC-C-CCCCCCCCCCCCCHHHCCCCC--CCC-
Q ss_conf 99897421000234103147889970688348992998432011100477-8-899888722342033034544--542-
Q 000581 1268 LAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLM-L-KTPERVPFRLTRDIIDGMGVT--GVE- 1342 (1408)
Q Consensus 1268 ~~ft~S~A~~SivgyiLgLgDRH~~NILld~~tG~v~HIDfg~~f~~~~~-l-~~pE~VPFRLTrnlv~~mG~~--g~e- 1342 (1408)
.+|++|+|++||+||||||||||++|||||+ ||+++|||||++|++++. + ..||+|||||||||+++||+. |.+
T Consensus 921 ~nF~~SlA~ySvv~YILGlGDRH~~NILid~-tG~v~HIDFG~~f~~~~~~l~~~pE~VPFRLT~~mv~~mg~g~~~~s~ 999 (1092)
T 2y3a_A 921 EEFTLSCAGYCVASYVLGIGDRHSDNIMVKK-TGQLFHIDFGHILGNFKSKFGIKRERVPFILTYDFIHVIQQGKTGNTE 999 (1092)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCTTTEEECT-TSCEEECCCSCCSSCCCCGGGCCCCCCCCCCCHHHHHHHHTTCSSCSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC-CCCEEEEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
T ss_conf 9999999999999998117789976378935-787899842334403776688888889804779999997068777775
Q ss_pred --CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf --30389999999999319338999999960398644335917899999997412887212
Q 000581 1343 --GVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKAWKAQKMNTKG 1401 (1408)
Q Consensus 1343 --G~Fr~~c~~t~~~LR~~~~~l~~iL~~f~~Dpl~~W~~~~~~~~~~~~~~~~~~~~~~~ 1401 (1408)
|.|+.+|+.++++||++++.|++++++|++|||++|+.. ++++..++++.+++++..
T Consensus 1000 ~fg~Fr~~c~~a~~~LR~~~~~Il~ll~lml~~~Lp~~~~~--~~i~~lr~rf~l~~seee 1058 (1092)
T 2y3a_A 1000 KFGRFRQCCEDAYLILRRHGNLFITLFALMLTAGLPELTSV--KDIQYLKDSLALGKSEEE 1058 (1092)
T ss_dssp STTHHHHHHHHHHHHHHHTHHHHHHHHHHTSTTCCSSCSSH--HHHHHHHHHTTCSSCHHH
T ss_pred CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHHHCCCCCHHH
T ss_conf 42259999999999998688999999999947999533536--579999986189999999
No 4
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=1.00 E-value=1 Score=530.90 Aligned_cols=433 Identities=18% Similarity=0.236 Sum_probs=314.0
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC------------CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 999999999833599840788899997853058------------71899999997300037443155257776202787
Q 000581 895 GLALEGYKRCLVIGDKYDVRVVFRLVSLWFSLS------------SRQNVIKNMVDTIDEVQSYKFIPLVYQIASRMGST 962 (1408)
Q Consensus 895 ~~Ai~~Yl~sL~~~~~~~~~~~~RllsLWl~~~------------~~~~v~~~i~~~l~~vPs~kfl~~ipQLisRL~~~ 962 (1408)
..|+..+++|+.+++......+..++.-|-..+ .++.|.....+.+...|...++..+|||+..|.+.
T Consensus 439 p~aL~~~l~sv~w~~~~~~~~~~~ll~~W~~~~~~~ALeLL~~~f~d~~Vr~yAv~~L~~~~d~~l~~yL~QLVQaLkyE 518 (940)
T 2wxf_A 439 PEALARLLLVTKWNKHEDVAQMLYLLCSWPELPVLSALELLDFSFPDCYVGSFAIKSLRKLTDDELFQYLLQLVQVLKYE 518 (940)
T ss_dssp GGGHHHHHTTSCTTCHHHHHHHHHHHHTCCCCCHHHHHHHTSTTCCCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHGGGC
T ss_pred CHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
T ss_conf 16888988014789989999999997057899999999865875899899999999987299899999999999998605
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCH---HHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH----HHH
Q ss_conf 44344131899999999999983783---58999987202763000000132013224699999999999974----677
Q 000581 963 KDALGLHNFQFALVSLVKKMAIDHPY---HTIFQLLALANGDRIKDKQRSRNSFVVDMDKKLAAENLLEELSS----YHG 1035 (1408)
Q Consensus 963 ~~~~~~~~f~~~L~~Ll~~i~~~hP~---h~ly~l~~l~~~~~~~~~~~~~~~~~v~~~~~~~a~~il~~l~~----~~~ 1035 (1408)
+. ....|..+|.+.+...|. +.+|.|.+...... .+.+. ..+++.+.. ...
T Consensus 519 ~~------~~s~L~~fLl~ra~~n~~i~h~l~W~l~~e~~~~~----~~~r~------------~~ile~~~~~~~~~~~ 576 (940)
T 2wxf_A 519 SY------LDCELTKFLLGRALANRKIGHFLFWHLRSEMHVPS----VALRF------------GLIMEAYCRGSTHHMK 576 (940)
T ss_dssp SS------SSCHHHHHHHHHHHHCHHHHHHHHHHHHTTTTCHH----HHHHH------------HHHHHHHHHHCHHHHH
T ss_pred CC------CCCHHHHHHHHHHHHCHHHHHHHHHHHEECCCCCH----HHHHH------------HHHHHHHHHHCHHHHH
T ss_conf 44------65589999999987575778999988310316906----99999------------9999999842678899
Q ss_pred HHHHHHHHHHHHHHHHHHHHCC---CCCCCCCC-CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CEE
Q ss_conf 9999999999999999731102---33323345-540333100246655554445678998766688866201125-638
Q 000581 1036 AIIRQMKQMVDVYIKLAELETR---REDTNKRI-QLPREIRCLRQLELVPVVTATVPIDCTCQYNEGSFPYFKGLA-ESV 1110 (1408)
Q Consensus 1036 ~~~~~~~~l~~~~~~la~~~~~---~~~~~~~~-~l~~~l~~l~~l~~~p~~t~~lp~~~~~~y~~~~~~~i~~f~-~~~ 1110 (1408)
.+.+ ...+++.+.+++..-.. +....++. .+.+.+......... +...+|.+| ...|.+|. +.+
T Consensus 577 ~l~~-q~~~~~~L~~i~~~ik~~~~~~~r~k~~~~L~~~l~~~~~~~~~--~~~~lP~~P--------~~~I~~~~~~~~ 645 (940)
T 2wxf_A 577 VLMK-QGEALSKLKALNDFVKVSSQKTTKPQTKEMMHMCMRQETYMEAL--SHLQSPLDP--------STLLEEVCVEQC 645 (940)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHTSHHHHHHH--SSEEETTEE--------EEEECEECGGGC
T ss_pred HHHH-HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCC--CCCCCCCCC--------CEEEEEECCCCE
T ss_conf 9999-99999999999999852465331789999999987141123306--898789998--------625777606714
Q ss_pred EEECCCCCCEEEEEEECC---CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEECCCCCCE
Q ss_conf 982488861499999079---95786643418630136699999999999998508122244420102218871899506
Q 000581 1111 MVMNGINAPKVVECFGSD---GHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGI 1187 (1408)
Q Consensus 1111 ~v~~s~~~Pk~i~~~gsd---G~~y~~L~K~G~dDlRqD~r~~Qlf~liN~lL~~~~et~rR~L~i~tY~ViPLs~~~Gl 1187 (1408)
.|++|+++|++|+++|+| |+.|.||+|+| ||+|||+|+||+|++||.+|++++ |+|.+++|+|||+++++||
T Consensus 646 ~V~~S~~~P~~l~~~gsD~~~G~~~~~i~K~g-DDLRqD~rv~Ql~~lmn~il~~~~----~~L~i~~Y~Vipls~~~Gl 720 (940)
T 2wxf_A 646 TFMDSKMKPLWIMYSSEEAGSAGNVGIIFKNG-DDLRQDMLTLQMIQLMDVLWKQEG----LDLRMTPYGCLPTGDRTGL 720 (940)
T ss_dssp EECSSTTCCEEEEEECTTTGGGGCEEEEEEES-SCCHHHHHHHHHHHHHHHHHHHTT----CCCCCCCCCEEEEETTEEE
T ss_pred EECCCCCCCEEEEEEECCCCCCCCEEEEEECC-CCCCHHHHHHHHHHHHHHHHHHCC----CCEEEEEEEEEEECCCCCE
T ss_conf 88331128749999834767786323798337-543312899999999999998389----9718995149982377886
Q ss_pred EEECCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCHHHHHH
Q ss_conf 7881898766887521024898887778885025787752014376899999998511-113899999980895589999
Q 000581 1188 LEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENF-RPVLHYFFLERFLQPAYWFEK 1266 (1408)
Q Consensus 1188 IE~v~~t~tl~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~f~~i~~~~-~pvl~~~f~~~f~~~~~w~~~ 1266 (1408)
||||+|+.|+++|+.... +... . ..+ .+++++||.+.++ ++.|+.+
T Consensus 721 IE~V~ns~tl~~I~~~~~---~~~~----------------~-------------~~f~~~~l~~~~~~~~~-~~~~~~a 767 (940)
T 2wxf_A 721 IEVVLHSDTIANIQLNKS---NMAA----------------T-------------AAFNKDALLNWLKSKNP-GEALDRA 767 (940)
T ss_dssp EECCSSEEEHHHHHTCCS---SSTT----------------C-------------CSSGGGHHHHHHHHHSC-TTHHHHH
T ss_pred EEECCCCCCHHHHHHHHC---CCHH----------------H-------------HCCCCHHHHHHHHHHCC-HHHHHHH
T ss_conf 867799736999998616---6302----------------2-------------02585569999997598-8889999
Q ss_pred HHHHHHHHHCCCHHHHEECCCCCCCCEEEEECCCCEEEEEECHHHHCCCC-CCC-CCCCCCCCCCCCHHHCCCCC--CCC
Q ss_conf 99989742100023410314788997068834899299843201110047-788-99888722342033034544--542
Q 000581 1267 RLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGL-MLK-TPERVPFRLTRDIIDGMGVT--GVE 1342 (1408)
Q Consensus 1267 R~~ft~S~A~~SivgyiLgLgDRH~~NILld~~tG~v~HIDfg~~f~~~~-~l~-~pE~VPFRLTrnlv~~mG~~--g~e 1342 (1408)
|.+|++|+|+|||+||||||||||++|||||+ ||+++|||||++|++++ .+. .||+|||||||||+++||+. |.+
T Consensus 768 ~~~F~~S~A~~Svv~YILGlgDRH~~NILid~-tG~v~HIDFG~~f~~~~~~l~~~pE~VPFRLT~~mv~~mg~g~~~~s 846 (940)
T 2wxf_A 768 IEEFTLSCAGYCVATYVLGIGDRHSDNIMIRE-SGQLFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNS 846 (940)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCGGGEEEET-TSCEEECCCCCCTTCC---------CCCCCCCHHHHHHHTTTCSCCH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC-CCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
T ss_conf 99999988999999998006789844379955-88789884133330456656888888981477999999707877777
Q ss_pred ---CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf ---30389999999999319338999999960398644335917899999997412887212
Q 000581 1343 ---GVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKAWKAQKMNTKG 1401 (1408)
Q Consensus 1343 ---G~Fr~~c~~t~~~LR~~~~~l~~iL~~f~~Dpl~~W~~~~~~~~~~~~~~~~~~~~~~~ 1401 (1408)
|.|+.+|+.++++||++++.|++++++|++||+++|... .+++..++++.+++++..
T Consensus 847 ~~~g~Fr~~c~~~~~~LR~~~~~ll~ll~lml~~~lp~~~~~--~~i~~l~~r~~l~~se~e 906 (940)
T 2wxf_A 847 EKFERFRGYCERAYTILRRHGLLFLHLFALMRAAGLPELSCS--KDIQYLKDSLALGKTEEE 906 (940)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHGGGCCTTSCSH--HHHHHHHHHHTTTSCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHHHCCCCCHHH
T ss_conf 434569999999999998678999999999957999545766--799999997189989999
No 5
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=1.00 E-value=1 Score=528.74 Aligned_cols=363 Identities=22% Similarity=0.360 Sum_probs=268.8
Q ss_pred HHHHHHHHHHHHHCCH--H-HHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHH
Q ss_conf 9999999999983783--5-89999872027630000001320132246999999999999746------7799999999
Q 000581 973 FALVSLVKKMAIDHPY--H-TIFQLLALANGDRIKDKQRSRNSFVVDMDKKLAAENLLEELSSY------HGAIIRQMKQ 1043 (1408)
Q Consensus 973 ~~L~~Ll~~i~~~hP~--h-~ly~l~~l~~~~~~~~~~~~~~~~~v~~~~~~~a~~il~~l~~~------~~~~~~~~~~ 1043 (1408)
+.|..+|.+.+...|. | .+|.|.+.... .... . +...+.+.-. ...+.++..+... ....+..-..
T Consensus 208 s~La~FLi~RAl~n~~ig~~lyW~L~~E~~~-~~~~-~--~~~~~~~~Y~-~vl~~~l~~l~~g~~~~~~~r~~L~~Q~~ 282 (614)
T 3ls8_A 208 QDLCTFLISRACKNSTLANYLYWYVIVECED-QDTQ-Q--RDPKTHEMYL-NVMRRFSQALLKGDKSVRVMRSLLAAQQT 282 (614)
T ss_dssp CCHHHHHHHHHHTCHHHHHHHHHHHHHHHHC-HHHH-H--HCHHHHHHHH-HHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCHHHHHHHHHHEEEECCC-CCCC-C--CCHHHHHHHH-HHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 8389999998734888887777660232357-5322-1--1227889999-99999999987268146899999999999
Q ss_pred HHHHHHHHHHHHCCCCCCC--CCCC-CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EEEEECCCCCC
Q ss_conf 9999999973110233323--3455-403331002466555544456789987666888662011256-38982488861
Q 000581 1044 MVDVYIKLAELETRREDTN--KRIQ-LPREIRCLRQLELVPVVTATVPIDCTCQYNEGSFPYFKGLAE-SVMVMNGINAP 1119 (1408)
Q Consensus 1044 l~~~~~~la~~~~~~~~~~--~~~~-l~~~l~~l~~l~~~p~~t~~lp~~~~~~y~~~~~~~i~~f~~-~~~v~~s~~~P 1119 (1408)
+++.+.++++... ++..+ ++.. +...+.......+..+....+|++| .++|.+|.| .+.|++|+++|
T Consensus 283 ~~~~L~~l~~~v~-~~~~~~~kk~e~L~~~L~~~~~~~l~~~~~~~lPl~P--------~v~I~~i~p~~~~V~~Sk~~P 353 (614)
T 3ls8_A 283 FVDRLVHLMKAVQ-RESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEP--------QVKIRGIIPETATLFKSALMP 353 (614)
T ss_dssp HHHHHHHHHHHHH-HSCSCHHHHHHHHHHHHHCHHHHCCSSCSSEEETTEE--------EEEEEEECGGGCEECSSTTCC
T ss_pred HHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCC--------CEEEEEEECCEEEEEECCCCE
T ss_conf 9999999999998-5024368899999999715001012457887899998--------669999965806885114682
Q ss_pred EEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEECCCCCCEEEECCCCCCHHH
Q ss_conf 49999907995786643418630136699999999999998508122244420102218871899506788189876688
Q 000581 1120 KVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGD 1199 (1408)
Q Consensus 1120 k~i~~~gsdG~~y~~L~K~G~dDlRqD~r~~Qlf~liN~lL~~~~et~rR~L~i~tY~ViPLs~~~GlIE~v~~t~tl~~ 1199 (1408)
|+|+|+|+||+.|.|++|+| ||+|||+++||+|++||.+|++++ ++|++++|+|||+++++|+||||++ .++.+
T Consensus 354 ~~l~~~gsDG~~y~~i~K~g-DDLRQD~~~~Ql~~l~n~il~~~~----ldL~i~~Y~Vipls~~~GlIE~V~~-~tl~~ 427 (614)
T 3ls8_A 354 AQLFFKTEDGGKYPVIFKHG-DDLRQDQLILQIISLMDKLLRKEN----LDLKLTPYKVLATSTKHGFMQFIQS-VPVAE 427 (614)
T ss_dssp EEEEEEETTSCEEEEEEEES-SCCHHHHHHHHHHHHHHHHHHHTT----CCCCCCCCCEEESSSSEEEEECCCC-EEHHH
T ss_pred EEEEEECCCCCEEEEEEECC-CCCHHHHHHHHHHHHHHHHHHHCC----CCCEEECCEEEEECCCCCEEEEECC-CCHHH
T ss_conf 79999926998877887438-851398999999999999999669----9844541079994598765887178-65899
Q ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH----HHHHHHHHHHHH
Q ss_conf 7521024898887778885025787752014376899999998511113899999980895589----999999897421
Q 000581 1200 YLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQPAYW----FEKRLAYTRSVA 1275 (1408)
Q Consensus 1200 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~f~~i~~~~~pvl~~~f~~~f~~~~~w----~~~R~~ft~S~A 1275 (1408)
++.. ...+..||.+.++++..| +++|.+|++|+|
T Consensus 428 il~~------------------------------------------~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A 465 (614)
T 3ls8_A 428 VLDT------------------------------------------EGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCA 465 (614)
T ss_dssp HHHH------------------------------------------TSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHH
T ss_pred HHHC------------------------------------------CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 9870------------------------------------------5869999998588866654455999999999877
Q ss_pred CCCHHHHEECCCCCCCCEEEEECCCCEEEEEECHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC--HHHHHHHHHH
Q ss_conf 00023410314788997068834899299843201110047788998887223420330345445423--0389999999
Q 000581 1276 ASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTGVEG--VFRRCCEKTL 1353 (1408)
Q Consensus 1276 ~~SivgyiLgLgDRH~~NILld~~tG~v~HIDfg~~f~~~~~l~~pE~VPFRLTrnlv~~mG~~g~eG--~Fr~~c~~t~ 1353 (1408)
+|||+||||||||||++||||| .||++||||||++|+++ +.||+||||||+||+++||++|+|| .|+.+|+.++
T Consensus 466 ~ySvv~YILGigDRH~~NILld-~tG~v~HIDFG~~f~~~---p~pe~vPFRLT~~mv~~mG~~~~e~f~~Fr~~c~~~~ 541 (614)
T 3ls8_A 466 GYCVITYILGVGDRHLDNLLLT-KTGKLFHIDFGYILGRD---PKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAF 541 (614)
T ss_dssp HHHHHHHHHTCCCCCTTSEEEC-TTSCEEECCCSSCTTCC---SSSSCCSSCCCHHHHHHTTCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHEEEECCCCCCCCEEEC-CCCCEEEEEHHHHHCCC---CCCCCCCEECCHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 7767510323468887666673-78988664117765358---8778887434899999839988721889999999999
Q ss_pred HHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 999319338999999960398644335917899999997412887212
Q 000581 1354 SVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKAWKAQKMNTKG 1401 (1408)
Q Consensus 1354 ~~LR~~~~~l~~iL~~f~~Dpl~~W~~~~~~~~~~~~~~~~~~~~~~~ 1401 (1408)
.+||+|.+.|++++++|+.+++++|...|.+.++..++++.+++++..
T Consensus 542 ~~LR~~~~~il~l~~lM~~s~lp~~~~~~~~~i~~l~~rf~l~lse~e 589 (614)
T 3ls8_A 542 LHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEE 589 (614)
T ss_dssp HHHHHTHHHHHHHHHTTTTSCCHHHHTSGGGHHHHHHHHTTTTSCHHH
T ss_pred HHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHH
T ss_conf 999877789999999970599974455758999999997389999999
No 6
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=1.00 E-value=1 Score=512.15 Aligned_cols=430 Identities=19% Similarity=0.274 Sum_probs=319.3
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC------------CHHHHHHHHHHHH-CCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 99999999833599840788899997853058------------7189999999730-0037443155257776202787
Q 000581 896 LALEGYKRCLVIGDKYDVRVVFRLVSLWFSLS------------SRQNVIKNMVDTI-DEVQSYKFIPLVYQIASRMGST 962 (1408)
Q Consensus 896 ~Ai~~Yl~sL~~~~~~~~~~~~RllsLWl~~~------------~~~~v~~~i~~~l-~~vPs~kfl~~ipQLisRL~~~ 962 (1408)
.|+.-+++|+.+++......+..++.-|-..+ .++.|.....+.+ ...|....+..+|||+.-|...
T Consensus 586 ~aL~k~L~sV~W~~~~e~~e~~~LL~~W~~i~~~~ALeLL~~~f~d~~VR~yAV~~L~~~~~ddeLl~YLlQLVQALKyE 665 (1091)
T 3hhm_A 586 EILPKLLLSVKWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRGFAVRCLEKYLTDDKLSQYLIQLVQVLKYE 665 (1091)
T ss_dssp GGHHHHHTTSCTTCHHHHHHHHHHHHTCCCCCHHHHHHTTSTTCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHGGGGC
T ss_pred HHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
T ss_conf 68889863278899899999999985578899889998576668998999999999875488899999999999997014
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCH---HHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH----HHHH
Q ss_conf 44344131899999999999983783---5899998720276300000013201322469999999999997----4677
Q 000581 963 KDALGLHNFQFALVSLVKKMAIDHPY---HTIFQLLALANGDRIKDKQRSRNSFVVDMDKKLAAENLLEELS----SYHG 1035 (1408)
Q Consensus 963 ~~~~~~~~f~~~L~~Ll~~i~~~hP~---h~ly~l~~l~~~~~~~~~~~~~~~~~v~~~~~~~a~~il~~l~----~~~~ 1035 (1408)
.- ....|..+|.+.+...|. +.+|.|.+...... ...+. ..+++.+. ....
T Consensus 666 ~~------~ds~La~FLl~RAl~n~~igh~lfW~L~~E~~~~~----~~~r~------------~~lLe~~~~~~~~~~~ 723 (1091)
T 3hhm_A 666 QY------LDNLLVRFLLKKALTNQRIGHFFFWHLKSEMHNKT----VSQRF------------GLLLESYCRACGMYLK 723 (1091)
T ss_dssp SS------SSCHHHHHHHHHHTTCHHHHHHHHHHHHTTTTCTT----THHHH------------HHHHHHHHHHSCTHHH
T ss_pred CC------CCCHHHHHHHHHHHHCHHHHHHHHHHEEECCCCCH----HHHHH------------HHHHHHHHHHCHHHHH
T ss_conf 33------55489999999986097888888777011025830----78999------------9999999851899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCC--CCCCCC-CC-CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EE
Q ss_conf 9999999999999999731102--333233-45-5403331002466555544456789987666888662011256-38
Q 000581 1036 AIIRQMKQMVDVYIKLAELETR--REDTNK-RI-QLPREIRCLRQLELVPVVTATVPIDCTCQYNEGSFPYFKGLAE-SV 1110 (1408)
Q Consensus 1036 ~~~~~~~~l~~~~~~la~~~~~--~~~~~~-~~-~l~~~l~~l~~l~~~p~~t~~lp~~~~~~y~~~~~~~i~~f~~-~~ 1110 (1408)
.+.++ ..+++.+.+++..... +....+ +. .+...+......+.. ....+|.+|. ..|.+|.+ .+
T Consensus 724 ~l~rQ-~~~~~~L~~is~~ik~~~~~~~~~~k~~~L~~~L~~~~~~~~~--~~~~lPl~P~--------~~I~~i~~~~~ 792 (1091)
T 3hhm_A 724 HLNRQ-VEAMEKLINLTDILKQEKKDETQKVQMKFLVEQMRRPDFMDAL--QGFLSPLNPA--------HQLGNLRLEEC 792 (1091)
T ss_dssp HHHHH-HHHHHHHHHHHHHTTSTTCCSCHHHHHHHHHHHHHSHHHHHHS--SSEEETTEEE--------EEECSBCGGGC
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHCC--CCCCCCCCCC--------EEEEEEEECEE
T ss_conf 99999-9999999999999863144433688999999998351101024--6788999950--------08989861547
Q ss_pred EEECCCCCCEEEEEEECC--CCEE----EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEECCCC
Q ss_conf 982488861499999079--9578----6643418630136699999999999998508122244420102218871899
Q 000581 1111 MVMNGINAPKVVECFGSD--GHKY----RQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPS 1184 (1408)
Q Consensus 1111 ~v~~s~~~Pk~i~~~gsd--G~~y----~~L~K~G~dDlRqD~r~~Qlf~liN~lL~~~~et~rR~L~i~tY~ViPLs~~ 1184 (1408)
.|++|+++|++|+|+|+| |+.| .+++|.| ||+|||+++||+|++||.+|++++ ++|.+++|+|||++++
T Consensus 793 ~V~~S~~~P~~L~f~g~D~~G~~y~~~~~~i~K~g-DDLRQD~~v~Qli~lmn~il~~~~----~dL~l~~Y~Vip~s~~ 867 (1091)
T 3hhm_A 793 RIMSSAKRPLWLNWENPDIMSELLFQNNEIIFKNG-DDLRQDMLTLQIIRIMENIWQNQG----LDLRMLPYGCLSIGDC 867 (1091)
T ss_dssp EECCSSSCCEEEEECCCSTTSTTTSCCEEEEEEES-SCCHHHHHHHHHHHHHHHHHHTTT----CCCCCCCCCEEEEETT
T ss_pred EEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECC-CCHHHHHHHHHHHHHHHHHHHHCC----CCCEEEEEEEEECCCC
T ss_conf 98621058179999547888761134432799748-633188999999999999998579----9806762269984698
Q ss_pred CCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCHHH
Q ss_conf 5067881898766887521024898887778885025787752014376899999998511-113899999980895589
Q 000581 1185 AGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEVCENF-RPVLHYFFLERFLQPAYW 1263 (1408)
Q Consensus 1185 ~GlIE~v~~t~tl~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~f~~i~~~~-~pvl~~~f~~~f~~~~~w 1263 (1408)
+|+||||+|++|+++|+.... ... . ..+ .+++++||.+.| ++..|
T Consensus 868 ~GlIE~V~ns~Tl~~I~~~~~----~~~---~--------------------------~~f~~~~L~~~f~~~~-~~~~~ 913 (1091)
T 3hhm_A 868 VGLIEVVRNSHTIMQIQCKGG----LKG---A--------------------------LQFNSHTLHQWLKDKN-KGEIY 913 (1091)
T ss_dssp EEEEECCSSEEEHHHHHHSCT----TTC---T--------------------------TCCCTTHHHHHHHTTS-CTTSH
T ss_pred CCCEEECCCCHHHHHHHHHHC----CCC---C--------------------------CCCCCHHHHHHHHHCC-CHHHH
T ss_conf 764345387250999998618----651---0--------------------------0247467999998608-76899
Q ss_pred HHHHHHHHHHHHCCCHHHHEECCCCCCCCEEEEECCCCEEEEEECHHHHCCCCC--CCCCCCCCCCCCCCHHHCCCC--C
Q ss_conf 999999897421000234103147889970688348992998432011100477--889988872234203303454--4
Q 000581 1264 FEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLM--LKTPERVPFRLTRDIIDGMGV--T 1339 (1408)
Q Consensus 1264 ~~~R~~ft~S~A~~SivgyiLgLgDRH~~NILld~~tG~v~HIDfg~~f~~~~~--l~~pE~VPFRLTrnlv~~mG~--~ 1339 (1408)
+.+|.+|++|+|++||+|||||+||||++|||||+ ||+++|||||++|++++. ...||+||||||+||+++||+ .
T Consensus 914 ~~ar~nF~~S~A~ysvv~YiLgigDRH~~NILid~-tG~v~HIDFG~~f~~~~~~~~~~~E~vPFrLT~~mv~vmg~G~~ 992 (1091)
T 3hhm_A 914 DAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVKD-DGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQ 992 (1091)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCCTTTEEEET-TSCEEECCCCCCSCC------------CCCCCHHHHHHSSCSSS
T ss_pred HHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEC-CCCEEEEEEHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCC
T ss_conf 99999999976424243788760688876469907-99989870254540387667777678884327999999825777
Q ss_pred CCC-----CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 542-----3038999999999931933899999996039864433591789999999741288721
Q 000581 1340 GVE-----GVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKAWKAQKMNTK 1400 (1408)
Q Consensus 1340 g~e-----G~Fr~~c~~t~~~LR~~~~~l~~iL~~f~~Dpl~~W~~~~~~~~~~~~~~~~~~~~~~ 1400 (1408)
|+| |.|+.+|+.++.+||+|++.|++++++|+++++++|+. .++++..++++.+++++.
T Consensus 993 ~~e~s~~fg~Fr~~c~~a~~~LR~~~~~il~LlelM~~s~lp~~~~--~~~i~~lr~rf~l~lsee 1056 (1091)
T 3hhm_A 993 ECTKTREFERFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQS--FDDIAYIRKTLALDKTEQ 1056 (1091)
T ss_dssp CCSSSHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHGGGSCCTTCSS--HHHHHHHHHHSCCSSCHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHHHCCCCCHH
T ss_conf 7655520778999999999999865678999999980699976576--579999999748998999
No 7
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=1.00 E-value=1 Score=31.53 Aligned_cols=66 Identities=15% Similarity=0.025 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 89999999999980599469999999997312799998863326688999999998699489999999999621
Q 000581 679 TMQHLLESASTLRKGFRLSQAAAALHELKFLYTGPGDQCSTVYWLGRLEEAKLLRAQGQHEMAINLAKYISENY 752 (1408)
Q Consensus 679 ~~~~wl~~a~laRkag~~~~A~~aL~~l~~l~~~~~~q~~~~~~~a~lE~Ak~LW~~Ge~~~AI~~Lk~l~~~~ 752 (1408)
....|...+....+.|++..|...+.++.... +. +..+....+..+...|+...|+..++.+....
T Consensus 304 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--~~------~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 369 (597)
T 2xpi_A 304 SSDLLLCKADTLFVRSRFIDVLAITTKILEID--PY------NLDVYPLHLASLHESGEKNKLYLISNDLVDRH 369 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT------CCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC--CC------CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
T ss_conf 09999999999998468999999999999729--55------37999999999998277779999999998518
No 8
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=1.00 E-value=1 Score=28.33 Aligned_cols=64 Identities=17% Similarity=0.075 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 999999999998059946999999999731279999886332668899999999869948999999999962
Q 000581 680 MQHLLESASTLRKGFRLSQAAAALHELKFLYTGPGDQCSTVYWLGRLEEAKLLRAQGQHEMAINLAKYISEN 751 (1408)
Q Consensus 680 ~~~wl~~a~laRkag~~~~A~~aL~~l~~l~~~~~~q~~~~~~~a~lE~Ak~LW~~Ge~~~AI~~Lk~l~~~ 751 (1408)
...|...+.+....|.+..|...+.++..+. |....+....+.++..+|+...|+..++..+..
T Consensus 203 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 266 (388)
T 1w3b_A 203 LDAYINLGNVLKEARIFDRAVAAYLRALSLS--------PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL 266 (388)
T ss_dssp HHHHHHHHHHHHTTTCTTHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 7999999999998578999999999998529--------687899999999999868899999999999864
No 9
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=1.00 E-value=1 Score=26.59 Aligned_cols=28 Identities=18% Similarity=0.151 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHCC
Q ss_conf 2459999987079999999999997200
Q 000581 408 LSSQIVTLEHEGNWSKALEYYELQVRSD 435 (1408)
Q Consensus 408 l~~~i~~yE~eg~W~kAL~~Yd~~l~~~ 435 (1408)
....+..|.+.|++++|+.+|+..++.+
T Consensus 203 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 230 (597)
T 2xpi_A 203 CYLRGQVYTNLSNFDRAKECYKEALMVD 230 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf 9998899998399899999999999729
No 10
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=1.00 E-value=1 Score=26.23 Aligned_cols=21 Identities=24% Similarity=0.305 Sum_probs=9.3
Q ss_pred HHHHHHCCHHHHHHHHHHHHH
Q ss_conf 999870799999999999972
Q 000581 413 VTLEHEGNWSKALEYYELQVR 433 (1408)
Q Consensus 413 ~~yE~eg~W~kAL~~Yd~~l~ 433 (1408)
..|...|++++|+.+|+..++
T Consensus 11 ~~~~~~g~~~~A~~~~~~~l~ 31 (359)
T 3ieg_A 11 KKLLAAGQLADALSQFHAAVD 31 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHH
T ss_conf 999875899999999999986
Done!