Query 000585
Match_columns 1406
No_of_seqs 196 out of 301
Neff 4.0
Searched_HMMs 46136
Date Mon Apr 1 20:07:29 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000585.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000585hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0916 1,3-beta-glucan syntha 100.0 0E+00 0E+00 3561.2 80.7 1237 7-1397 434-1678(1679)
2 PF02364 Glucan_synthase: 1,3- 100.0 2E-270 3E-275 2389.2 48.7 698 501-1240 1-777 (817)
3 PF02364 Glucan_synthase: 1,3- 98.1 1.1E-06 2.5E-11 109.8 1.9 42 598-639 101-142 (817)
4 PRK11498 bcsA cellulose syntha 87.8 0.28 6E-06 64.0 2.1 188 770-977 325-522 (852)
5 PRK11204 N-glycosyltransferase 85.0 2 4.4E-05 50.8 7.1 142 758-919 112-257 (420)
6 PRK14583 hmsR N-glycosyltransf 84.7 5.2 0.00011 48.4 10.5 136 770-919 141-278 (444)
7 cd02520 Glucosylceramide_synth 61.7 21 0.00045 37.8 6.6 101 771-919 73-174 (196)
8 TIGR03111 glyc2_xrt_Gpos1 puta 59.4 53 0.0011 40.1 10.3 42 770-815 117-159 (439)
9 cd06421 CESA_CelA_like CESA_Ce 44.7 17 0.00037 38.5 2.8 138 770-919 70-208 (234)
10 PF12823 DUF3817: Domain of un 34.7 1.3E+02 0.0028 30.0 6.8 69 1244-1317 12-81 (92)
11 PHA03048 IMV membrane protein; 32.0 73 0.0016 32.0 4.5 30 957-986 1-30 (93)
12 PRK10547 chemotaxis protein Ch 31.2 2.3E+02 0.0049 37.3 10.0 88 342-433 10-97 (670)
13 TIGR03472 HpnI hopanoid biosyn 30.0 1.6E+02 0.0035 35.1 7.9 130 771-916 113-247 (373)
14 PRK14716 bacteriophage N4 adso 28.7 54 0.0012 41.3 3.9 26 893-918 260-285 (504)
15 COG1215 Glycosyltransferases, 28.2 55 0.0012 38.7 3.7 134 757-917 112-260 (439)
16 CHL00032 ndhA NADH dehydrogena 26.5 7.5E+02 0.016 30.4 12.6 27 1336-1362 158-186 (363)
17 TIGR03030 CelA cellulose synth 26.3 78 0.0017 41.3 4.8 158 771-945 215-381 (713)
18 PF11457 DUF3021: Protein of u 25.2 7.5E+02 0.016 25.3 11.4 86 1275-1368 7-99 (136)
19 PF10569 Thiol-ester_cl: Alpha 22.5 31 0.00067 28.2 0.2 11 938-948 9-19 (31)
20 PF14518 Haem_oxygenas_2: Iron 22.5 51 0.0011 32.2 1.7 75 768-863 9-89 (106)
21 PF07304 SRA1: Steroid recepto 21.5 4.3E+02 0.0093 28.7 8.4 66 347-421 44-112 (157)
22 PF15469 Sec5: Exocyst complex 21.0 2.5E+02 0.0055 30.2 6.7 64 316-384 73-139 (182)
23 PF13641 Glyco_tranf_2_3: Glyc 20.9 50 0.0011 35.1 1.4 133 771-918 73-206 (228)
No 1
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=0 Score=3561.18 Aligned_cols=1237 Identities=59% Similarity=0.960 Sum_probs=1165.6
Q ss_pred HHHHHHHH--HHHHHHhhhheeccccccCCCcccccccccCCCCCCCChhHHHHHHHHHhHHHHHHHHHHhhHHHHHhhh
Q 000585 7 LRYILKAV--SAAGWVVILPITYAYSLKNPAGFAQTIKSWFGNSPSSPSLFVTAILVYLAPNMLSVLLFLFPFIRRFLER 84 (1406)
Q Consensus 7 ~r~~lk~~--~~~~w~v~~~~~Y~~~~~~~~~~~~~~~~w~~~~~~~~~~y~~~~~~y~~p~~~~~~l~~~P~~r~~~e~ 84 (1406)
.|-.++++ ++++|+|.+|++|.++|.+ .+++|+.++.+|+.|+.++++++.+|++|+.+|+
T Consensus 434 f~Twl~l~q~fa~iWvi~~~v~y~~s~~n-----------------spt~y~~~~~~yl~p~~la~~~~~~p~~~~~v~~ 496 (1679)
T KOG0916|consen 434 FRTWLHLLQNFARIWVIHFSVFYYYSVYN-----------------SPTLYTKNVHIYLGPQPLAAVLWAVPALRGTVES 496 (1679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------CceeEEEeeeeecCCcHHHHHHHHHHHHHhHHHH
Confidence 34445555 7899999999999999965 5889999999999999999999999999999999
Q ss_pred ccchhhhhhhhhcCCceeeecCCCccchhhhhHHHHHHHHHHHhhhhceeeEeccCcchhhHhhhhccccccccccccCC
Q 000585 85 SNNKILMLIMWWSQPRLYVGRGMHESSISLFKYTTFWILLIASKLAFSYFVEIKPLVGPTKAVMQVHVRTFQWHEFFPQA 164 (1406)
Q Consensus 85 s~~~~~~~~~w~~q~r~yVGRgm~e~~~~~~kY~~FWi~ll~~K~~FsY~~~IkPLV~PT~~I~~~~~~~y~whe~~~~~ 164 (1406)
++|.++++++||+|||.|+| | |||+|..
T Consensus 497 ~~~~~~~~~~W~~~pr~~~G--------------------------------------p--------------h~~~~r~ 524 (1679)
T KOG0916|consen 497 LIMLIATLFEWWFVPRKFPG--------------------------------------P--------------HEFFPRF 524 (1679)
T ss_pred HHHHHHHHHhhhcccccCCC--------------------------------------c--------------hhhhHHH
Confidence 99999999999999999999 1 9999999
Q ss_pred CcchhhhHHhhhHHHHHhhhhHHHHHHHHHHHHhhHHhhhhccCcccchHHHHHHHhhchHHHHhccCCcccchhhhhcc
Q 000585 165 KNNIGVVIALWAPIVLVYFMDTQIWYAIFSTIFGGIYGAFRRLGEIRTLGMLRSRFQSLPGAFNACLIPVEKNEKTKKKG 244 (1406)
Q Consensus 165 ~~N~~~v~alWaPvvlvYfmDtqIWY~i~s~i~G~~~G~~~~lGEIRt~~~lr~rF~~~p~aF~~~l~p~~~~~~~~~~~ 244 (1406)
++|+++|+++|+|||+||+|||||||+|+|+++||++|+|+||||||+++ |+.+|+||+.++.|.+ .+++..
T Consensus 525 ~~n~~~v~~~w~Pvv~Vy~mdtqiwy~i~s~lvggivg~f~~lgeir~~~-----f~~lp~af~~~l~~~~---~~r~~~ 596 (1679)
T KOG0916|consen 525 KNNIGVVIANWAPVVLVYFMDTQIWYAIFSTLVGGIVGFFFHLGEIRTLS-----FQPLPGAFNAYLKPKE---SKRKYL 596 (1679)
T ss_pred HHHHHHHHHHHhhHhheeehhhHHHHHHHHHHHHHHHHHHHHhheeEeee-----eeEchHhHhhhcCCCc---hhhhhh
Confidence 99999999999999999999999999999999999999999999999999 9999999999999964 222211
Q ss_pred cccccccccccccchhhHHHhHHHHhHHHHHhccccccccccccccceeccccCCCCCCcccCchhhhcCchHHHHHHHH
Q 000585 245 LKATFSRKFDEVTTNKEKEEAKFAQMWNKIISSFREEDLISNREMDLLLVPYWADRDLDLIQWPPFLLASKIPIALDMAK 324 (1406)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~rFa~~WNeiI~s~ReeDlIsdrE~~lL~~p~~~~~~~~~i~wP~FLla~ki~~Ald~a~ 324 (1406)
.+..|+. +.++.+++++++|+++||+||.++||||+|||+|++++++|++.....+.. +||||+ ++|++|||
T Consensus 597 ~~~~ft~---~~~~~~~~~a~~f~~lWn~vi~a~r~Edyis~~e~~l~i~~l~~~~~~~~~---~flL~s--~la~~qaK 668 (1679)
T KOG0916|consen 597 ANKTFTA---KFAPLNGKEAARFALLWNTVILAKREEDYISLRELRLLIRPLSTMSSYDCT---IFLLGS--PLALDQAK 668 (1679)
T ss_pred hhhcccc---cCCCcchHHHHHHHHHHHHHHHHhhhHHhhhccchhhhhcccccCCcccch---hHHhcc--HHHHHHHH
Confidence 2223333 345678899999999999999999999999999999999997665333333 999999 99999999
Q ss_pred hhcCCcH-HHHHHhhcChhHHHHHHHHHHHHHHHHHHhcCCc-hhhHHHHHHHHHHHHHHhcCcccceeccCcchhHHHH
Q 000585 325 DSNGRDR-ELKKRLNSDNYMHRAVQECYASFKIIINVLVLGE-REKEVINEIFSKVDEHIREDNLLTELNMSALPSLYEQ 402 (1406)
Q Consensus 325 ~~~~~d~-~L~~~i~~d~y~~~AV~e~y~s~k~il~~ll~~~-~~~~ii~~i~~~i~~~i~~~~~~~~f~~~~Lp~l~~~ 402 (1406)
+..+++. +|+++|+.|+||.|||.|||+|+|.++..++.++ .++.|+++++++|+++|.+.++..+||++.||.++.+
T Consensus 669 ~~~g~~~~~l~~~~~~DtYm~yaV~e~y~Sik~~~~~~i~~~T~~r~i~~ri~~rI~~~I~~~~~~~~fk~~vL~~~~~~ 748 (1679)
T KOG0916|consen 669 ILLGKMYLTLLILFFLDTYLWYAVVETYFSIKKSFYLGISILTPWRNIFSRLPKRIYSKILATDLEIEFKPKVLPSQIWN 748 (1679)
T ss_pred HhcCchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHhhHHHHhChhhhHHHHhh
Confidence 9998666 9999999999999999999999999999999888 8889999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCchhhHHHHHHHHHHHHHHHhhhccCccccccccCCCCCCCCCCCCccccccccccccCCCCCCCChH
Q 000585 403 CVELIECLLANKKEDKDRVVIVLLNMLEVVTRDIMEDDVPSLLDSSHGGSYGKTEGMTPLDQQVHFFGALGFPVYPETEA 482 (1406)
Q Consensus 403 ~~~L~~~L~~~~~~~~~~vv~~l~~l~evv~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lF~~~i~~p~~~~~~~ 482 (1406)
++.|+ + ..++ ++++|+++|++++|++.++.+ +. .+...+|.+ ++ |..
T Consensus 749 ~i~i~---m--y~e~----l~~lq~l~ell~~qv~~e~~~---~~--------------~~~~~ff~~-~~------d~~ 795 (1679)
T KOG0916|consen 749 AIKIS---M--YREH----LLALQHLQELLYHQVPSEGGG---QT--------------LKAPTFFVS-QD------DGS 795 (1679)
T ss_pred hhhee---h--hHHH----HHHHHHHHHHHHHHhhhhccc---ch--------------hhcchhhee-cc------ccc
Confidence 99998 1 1121 999999999999999988722 10 011114543 22 333
Q ss_pred HHHHHHHHHhhhcccccccCCCCChhhhHHHhhhhccCCCCCCCCccccccccceeecccccceeecccccccCcCCCcc
Q 000585 483 WKEKIRRLHLLLTVKESAMDVPSNLEAIRRISFFSNSLFMDMPSAPKVRNMLSFSVLTPYYSEDVLFSINGLEKPNEDGV 562 (1406)
Q Consensus 483 ~~~~v~Rl~~lLt~~~sa~~~P~~~EArRRisFFanSL~m~mP~a~~V~~M~sfSVLtPyY~E~Vl~Sl~eL~~e~edgv 562 (1406)
+ |+|+++|+|+||||||+||+|||||+||+||||++|||||||||||+||||||++||++||||||
T Consensus 796 ~--------------~s~~~~P~n~EA~RRisFFa~SL~m~mP~a~~V~~M~sFsVLtP~YsE~vl~S~~el~~e~ed~v 861 (1679)
T KOG0916|consen 796 F--------------ESAEFVPSNLEARRRISFFANSLFMPMPEAPPVRNMPSFSVLTPYYSEKVLYSLRELIRENEDGV 861 (1679)
T ss_pred c--------------cchhhCCccHHHHHHHHHHHHhhccCCCCCCcccccCceeeecccchhhhhhhHHHHhhcccCCe
Confidence 3 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHhCchhhhhHHHHhcCCchh---hhhhchHHHHHHhhhhhcccccccccccccccHHHHHHHHhhhhccCchH
Q 000585 563 SILFYLQKIFPDEWMNFLERVNCSSEE---ELRASEELEEELRLWASYRGQTLTKTVRGMMYYRKALELQAFLDMAKDEE 639 (1406)
Q Consensus 563 siL~YL~~i~PdEW~NFler~~~~~~~---~~~~~~~~~~elRlWAS~RgQTL~RTVrGmM~Y~~ALkll~~lE~~~~~~ 639 (1406)
|+|+||||||||||+||+||+||+++| |++..+++++|||+|||||||||||||||||||+|||||||++|++++.+
T Consensus 862 siL~YLqki~pdEW~nFler~k~~~~e~~~dl~~~pe~~l~lR~WaS~RgQTL~RTvrGmMyY~rAlkL~~~~e~~~~~~ 941 (1679)
T KOG0916|consen 862 SILFYLQKIYPDEWKNFLERTKCLAEEKIDDLPFYPEYTLRLRIWASYRGQTLYRTVRGMMYYSRALKLLYFLENPEEVD 941 (1679)
T ss_pred eHHHHHHHhCcHHHHHHHHHhccchhccccccccchhHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhhcchhhH
Confidence 999999999999999999999999977 65556789999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhcccchhhccchhhHHHHHHHHHhCcccEEEEeeecccCCCCCchhhHHHHHHHHhCCCcEEEEeeccccccc
Q 000585 640 LMKGYKAAELNSEEQSKSETSLWAQCQAVSDMKFTYVVSCQQYGTHKRSGDARAKDILRLMTTYPSLRVAYIDEVEETSK 719 (1406)
Q Consensus 640 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~KF~yVVscQ~Yg~~k~~~d~~a~di~~Lm~~~P~LrVAYide~~~~~~ 719 (1406)
+.+|.++ ....+++++++||++|||||||||+||.||+++|++||||++||++||+||||||||++++.+
T Consensus 942 ~~~G~~~----------~~~~l~~~l~~~A~~KFtyvVscQ~Y~~~K~~~d~~ae~i~~Lm~~yp~LriAYide~e~~~~ 1011 (1679)
T KOG0916|consen 942 LFEGDSN----------EDRSLEAELEAMADRKFTYVVSCQRYGNQKFSGDERAENILFLMRAYPSLRIAYIDEVEPPVE 1011 (1679)
T ss_pred HhcCCch----------hhhHHHHHHHHHHhccceEEEehhHhhhhccCCChHHHHHHHHHHhCccceEeeecccccccc
Confidence 8887331 112599999999999999999999999999999999999999999999999999999887665
Q ss_pred cccccccceEEEEEEeccCCCCCcCCCccccccccceEEEEecCCCcccCCCCCcCccchhhhhcccccccccCCccchH
Q 000585 720 DKTKKTVQKVYYSALAKAAAPTKSIDSSETVQTLDQVIYRIKLPGPAILGGGKPENQNHAIIFTRGEGLQTIDMNQDNYM 799 (1406)
Q Consensus 720 ~~~~~~~~~~yySvLik~~~~~~~~d~~~~~~~~~~eiYRIkLPG~pilGEGKpeNQNhAiIFtRGE~lQtIDmNQDnYl 799 (1406)
++ +++||||||||+++ .+++++|+||||||||||||||||||||||||||||||||||||||||||||
T Consensus 1012 ~~-----~~~~YS~Lvk~~~~-------~~~~~~~~~iyrIkLpG~pilGeGKpeNQNhaiiFtRGE~iQtIDmNQDnYl 1079 (1679)
T KOG0916|consen 1012 EG-----EPVYYSVLVKGDCE-------IDENGLDQEIYRIKLPGPPILGEGKPENQNHAIIFTRGEAIQTIDMNQDNYL 1079 (1679)
T ss_pred CC-----CceEEEEeeecCcc-------hhhcccccceEEEeCCCCCcCCCCCCcccCceeeeecchhhheecccchHHH
Confidence 43 46999999999953 2458999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHhhcCCCCCCceEeeccceeecccchhhhhhcccchhhHHHHHHHhhccccceeeecCCCcccccccc
Q 000585 800 EESLKMRNLLQEFLKKHDGVRYPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRLLAHPLKVRFHYGHPDVFDRLFH 879 (1406)
Q Consensus 800 EEalKmRNlL~Ef~~~~~g~~~~tIlG~REhIFT~svssLa~f~a~qE~sFvTl~qR~LA~Pl~vR~HYGHPDvfd~~F~ 879 (1406)
||||||||||+||++.|.|.+||||||+|||||||||||||||||||||||||||||+||+|+||||||||||||||+||
T Consensus 1080 EE~lKmRnlL~EF~~~~~g~r~ptIlG~RE~IFt~svssLa~fms~qEqSFvTlgqR~LA~p~~vr~HYGHPD~~drif~ 1159 (1679)
T KOG0916|consen 1080 EEALKMRNLLQEFEELHLGIRPPTILGAREHIFTGSVSSLAWFMSGQEQSFVTLGQRTLANPGGVRLHYGHPDVFDRIFH 1159 (1679)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCceeeehhheecCCchHHHHHHccCccchhhHHHHHhccccceeeecCCCcHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccccccccccchhhhccccccccCceeeeeeeEEeccccccCcccccchhhhhcCCCccccchhhhHhhccccch
Q 000585 880 LTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEYIQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDIYRLGHRFDF 959 (1406)
Q Consensus 880 ~TRGGvSKAsk~inLsEDIfaG~N~~lRgG~I~h~EYiQcGKGRDvG~~qI~~FeaKIa~G~GEQ~LSRd~yrLG~~ldf 959 (1406)
+||||||||||||||||||||||||||||||||||||||||||||||||||++||||||+|||||+||||+|||||||||
T Consensus 1160 ~TRGGvSKAsk~inlsEDIfAG~n~tlRgG~itH~EYiQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrLG~~ldf 1239 (1679)
T KOG0916|consen 1160 ITRGGVSKASKGINLSEDIFAGFNATLRGGNITHHEYIQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRLGTQLDF 1239 (1679)
T ss_pred hccccchHhhcccccchHhhhhhhHHhhCCCcccceeeecccccccCcchhhhhhhhhcCCCcchhhhHHHHHhcccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCchhhhhccchHhHHHHHHHhHHHHHHHH
Q 000585 960 FRMLSCYVTTIGFYFSTLLTVLTVYVFLYGRLYLILSGLEKGLSTQPAIRDNKPLQVALASQSFVQIGFLMALPMMMEIG 1039 (1406)
Q Consensus 960 fR~LSfYyt~~GFy~n~~~~vltv~~fly~~lylalsg~e~~~~~~~~~~~~~~l~~~l~~q~i~qlg~l~~lPm~~~~~ 1039 (1406)
||||||||||||||+|||+||+|||+||||++|+++||+|+.+...+...++.+|+.++++|||||+|+++++||+||++
T Consensus 1240 fRmLSfyftt~GF~~n~m~ivltVy~Fl~GrlYl~lsg~~~~~~~~~~~~~~~~l~~aL~~qsifqv~~~~~lPmv~e~~ 1319 (1679)
T KOG0916|consen 1240 FRMLSFYFTTVGFYFNNMFIVLTVYLFLYGRLYLVLSGYEKDISLTASPRGCYALEPALAWQSIFQVGFIMFLPMVMEIG 1319 (1679)
T ss_pred HHHHHHHhccccHHHHhHHHHHHHHHHHHHhHHHHHhhhhhccccccCCCccchHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987767788889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccceeEEEEeeeeEeEecccccccCceeeccCCceEEeecchhhhhhhhhhhhHHHHHHHHH
Q 000585 1040 LERGFRNALSDFILMQLQLAAVFFTFSLGTKTHYYGRTLLHGGAEYRGTGRGFVVFHAKFAENYRLYSRSHFVKGIELMI 1119 (1406)
Q Consensus 1040 lE~G~~~A~~~~~~~~l~l~~~F~~F~~gt~~h~~~~~il~GGAkY~aTGRGFvi~h~~F~~~Y~~YarShf~~g~el~~ 1119 (1406)
+||||++|+.||++||+||||+||||+||||+|||+|||+|||||||||||||||.|++|++|||+|||||||||+|+++
T Consensus 1320 lErGf~~A~~~f~~mqlqLa~vF~tF~~gt~~hy~~rtllhGGAkYr~TGRGFvv~h~~FsenYrlysrshfvkg~el~l 1399 (1679)
T KOG0916|consen 1320 LERGFLRALSRFIKMQLQLAPVFFTFSLGTYTHYFGRTLLHGGAKYRATGRGFVVFHAKFSENYRLYSRSHFVKGSELML 1399 (1679)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHheeeeccchhHhhhhHhhcCCeeeeccCcceEEEeccHHHHHHHhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccchhhhhHHHHHHHHHHHHHhhcccccCCCCccchhhhhhHHHHHHhhccCCCCCCCCCCchhHHHHH
Q 000585 1120 LLLVYHILGNSYRGVVAFLLITVSIWFMVGTWLFAPFLFNPSGFEWQKIIDDWTDWNKWISNRGGIGVPPEKSWESWWEK 1199 (1406)
Q Consensus 1120 lLivy~~~g~~~~~~~~y~~~t~s~W~~~~swl~aPf~FNP~gF~w~k~~~D~~dw~~Wl~~~ggi~~~~~~SW~~Ww~~ 1199 (1406)
||+||.+||+.++++.+|++.|+|+||+++|||||||+||||||+|+|+|+||+||++||++|||+|+++++||++||++
T Consensus 1400 mLlvy~~fg~~~~~~~~y~~~~i~~Wf~v~swlfAPFlFNPsgF~W~~~v~D~~d~~rWl~~rG~~~~~~~~SW~~ww~~ 1479 (1679)
T KOG0916|consen 1400 LLLVYQIFGPAYRSSTVYILITISFWFLVGSWLFAPFLFNPSGFEWQKFVDDYRDWIRWLWSRGGIGVHAEKSWESWWEE 1479 (1679)
T ss_pred HHHHHHHhCccccchHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHhhHHHHHHHHHhcCCCCCCccccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhccCcchhhHHHHhhhhhhhhheeeeeeecccc-CCccEeehhhHHHHHHHHHHHHhhhhccccccccchhhHHH
Q 000585 1200 EQRHLLYSGKRGIIVEILLSLRFFMYQYGLVYHLSFTK-STQNFLVYGASWVVIIFVLLLVKGMSVGRRRFSANFQLLFR 1278 (1406)
Q Consensus 1200 e~~~lr~tg~~~~~~eiil~LRFf~~qyGivy~L~I~~-~~~si~Vy~lSW~vi~~v~~llk~vs~~rrk~sa~~ql~~R 1278 (1406)
|++|++++|.+|+++||++++|||+||||+||+||+.. .++++.||++||++++++++++++++++++|+++++|+++|
T Consensus 1480 e~~hl~~~~~~G~~~Ei~l~l~f~~f~~~~~~~ln~~~g~~~~~~v~~~s~~~i~~v~~~~~~~~~~~kk~g~~~~~~~r 1559 (1679)
T KOG0916|consen 1480 EQEHLTGSGRRGRFLEIILPLRFFFFQYGIVYFLNIQPGTNTSLRVYILSWAPIAAVLFLFKLLGMCRKKFGAVFALLAR 1559 (1679)
T ss_pred HHHHHhccCccchhHHHHHHHHHHHhhheeeEEEeccCCCCceEeehhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999988 59999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHhhHHHHHHHHHHhhhchhcccchHHHHHHHHHHHHHHHHHHHHH
Q 000585 1279 MIKGLVFISFITIFIILIAIPHMTFKDILLCILAFMPTGWGLLLIAQACKPLMQRGGIWESIKTLARGYEIVMGLLLFTP 1358 (1406)
Q Consensus 1279 lik~llfl~~vavlv~l~~l~~lti~D~fa~lLAflptGWGll~Iaqa~~p~~~~~~~W~~Vr~LAr~yD~~mG~ilf~P 1358 (1406)
++|++++++++.+++++..+++++..|+++|++||.|||||+++|+|++||+.++.++|++|+.+||+||++||++||+|
T Consensus 1560 ~i~~~~~~~~~~v~~~l~~~~~~~~~d~~~~~la~~~t~~~~l~i~~~~r~~~~~~~~W~~~~~~~~ayd~~mg~li~~p 1639 (1679)
T KOG0916|consen 1560 FIKVLVFLLFFEVMWVLEGWSFLTTVDLFVSILAFHPTGWGLLLIAQLTREVKKDLGWWSGVWYLARAYDFFMGHLIFFP 1639 (1679)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccccchhhhhhcchhhcccccchhhhccccCcc
Q 000585 1359 VAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKE 1397 (1406)
Q Consensus 1359 Ia~LSwfPfvs~fQTRlLFNqAFSRgLqIs~Ilag~~~~ 1397 (1406)
+|+||||||+++|||||||||||||||||++||+||+++
T Consensus 1640 ~a~l~w~Pfi~~fqtr~LFn~afSR~l~i~~Il~gk~~~ 1678 (1679)
T KOG0916|consen 1640 VAPLSWFPFISEFQTRMLFNQAFSRGLRISRILAGKQKK 1678 (1679)
T ss_pred HHHHHHhhhhhHHHHHHHHHhcccccCCcchhhccCccC
Confidence 999999999999999999999999999999999999986
No 2
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=100.00 E-value=1.6e-270 Score=2389.22 Aligned_cols=698 Identities=55% Similarity=0.870 Sum_probs=636.3
Q ss_pred cCCCCChhhhHHHhhhhccCCCCCCCCccccccccceeecccccceeecccccccCcCC--CcccHHHHHHHhCchhhhh
Q 000585 501 MDVPSNLEAIRRISFFSNSLFMDMPSAPKVRNMLSFSVLTPYYSEDVLFSINGLEKPNE--DGVSILFYLQKIFPDEWMN 578 (1406)
Q Consensus 501 ~~~P~~~EArRRisFFanSL~m~mP~a~~V~~M~sfSVLtPyY~E~Vl~Sl~eL~~e~e--dgvsiL~YL~~i~PdEW~N 578 (1406)
+.+|+|+||||||+||||||+||||+||||++|||||||||||+|||+||++||++||| ||||+|+|||+||||||+|
T Consensus 1 ~~~P~~~EA~RRisFFanSL~~~mP~~~~V~~M~sfsVLtP~Y~E~Vl~Sl~eL~ke~e~~~~vtlL~YLk~l~p~EW~n 80 (817)
T PF02364_consen 1 EFFPRNSEARRRISFFANSLFMPMPEPPPVEKMPSFSVLTPYYSEKVLYSLKELIKENEQNDGVTLLEYLKQLYPDEWEN 80 (817)
T ss_pred CCCCCchHHHHHHHHHHHhcCCCCcCCCchhhccccccccccccceeccCHHHhhhcccccCCccHHHHHHHHChHHHHH
Confidence 35899999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred HHHHhcCCchhhh-------------h-----------------hchHHHHHHhhhhhcccccccccccccccHHHHHHH
Q 000585 579 FLERVNCSSEEEL-------------R-----------------ASEELEEELRLWASYRGQTLTKTVRGMMYYRKALEL 628 (1406)
Q Consensus 579 Fler~~~~~~~~~-------------~-----------------~~~~~~~elRlWAS~RgQTL~RTVrGmM~Y~~ALkl 628 (1406)
|+||+|++++++. | ..++.++++|+|||+|||||||||+|||||++|||+
T Consensus 81 F~er~k~~~~e~~~~~~~~~~~~~~~was~r~qtL~rtv~Gfm~~~~a~~LrtrLWASlR~QTLyRTV~G~m~y~~Alkl 160 (817)
T PF02364_consen 81 FVERTKRLAEESDAEESSEKEEELRLWASYRGQTLPRTVRGFMYYEPAYTLRTRLWASLRGQTLYRTVSGFMNYSKALKL 160 (817)
T ss_pred HHHHhcccchhhhhhccccchhhhhHHHHhcccCCCchhhhhhhhhHHHHHHhhhhhccHHHhhhhhhhhhhhHHHHHhh
Confidence 9999999873311 1 125679999999999999999999999999999999
Q ss_pred HhhhhccCchHHHhhhhhhcccchhhccchhhHHHHHHHHHhCcccEEEEeeecccCCCCCchhhHHHHHHHHhCCCcEE
Q 000585 629 QAFLDMAKDEELMKGYKAAELNSEEQSKSETSLWAQCQAVSDMKFTYVVSCQQYGTHKRSGDARAKDILRLMTTYPSLRV 708 (1406)
Q Consensus 629 l~~lE~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~KF~yVVscQ~Yg~~k~~~d~~a~di~~Lm~~~P~LrV 708 (1406)
|+++|+++.++..+ .+.+.++++++++|++||+||||||+||+|| +++|+||++||++||+|||
T Consensus 161 l~~~e~~~~~~~~~-------------~~~~~~~~~~~~~a~~KF~yVVs~Q~yg~~~---~~~a~~i~~Lm~~~P~LrV 224 (817)
T PF02364_consen 161 LYRVENPSIEQMFG-------------GNYESLERELEAMADRKFTYVVSCQRYGKFK---KEEAEDIEFLMRAYPSLRV 224 (817)
T ss_pred HhhccCCchhhhcc-------------CchHHHHHHHHHHHhcCCCEEEecchhcCCC---hHHHHHHHHHHHhCCceEE
Confidence 99999976554322 2346778899999999999999999999999 6779999999999999999
Q ss_pred EEeeccccccccccccccceEEEEEEeccCCCCCcCCCccccccccceEEEEecCCCcccCCCCCcCccchhhhhccccc
Q 000585 709 AYIDEVEETSKDKTKKTVQKVYYSALAKAAAPTKSIDSSETVQTLDQVIYRIKLPGPAILGGGKPENQNHAIIFTRGEGL 788 (1406)
Q Consensus 709 AYide~~~~~~~~~~~~~~~~yySvLik~~~~~~~~d~~~~~~~~~~eiYRIkLPG~pilGEGKpeNQNhAiIFtRGE~l 788 (1406)
|||||+++++++ . +++||||||||+++ .+++|+++|+||||||||||||||||||||||||||||||+
T Consensus 225 AYide~~~~~~~-~----~~~yYS~Lv~~~~~-------~~~~g~~~~~yri~LpG~pilGeGK~eNQNhaiiF~rGe~l 292 (817)
T PF02364_consen 225 AYIDEVPDRNGG-G----EPEYYSVLVKGDCE-------IDENGKRQEIYRIKLPGNPILGEGKPENQNHAIIFTRGEYL 292 (817)
T ss_pred EEEeeecccCCC-C----CceEEEEEecCCcc-------ccccCcccceEEEECCCCCcCCCCCccccceeEEEEccccc
Confidence 999998765443 2 68999999999953 33589999999999999999999999999999999999999
Q ss_pred ccccCCccchHHHHHhhhhhHHHHhhcCC-------------CCCCceEeeccceeecccchhhhhhcccchhhHHHHHH
Q 000585 789 QTIDMNQDNYMEESLKMRNLLQEFLKKHD-------------GVRYPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQ 855 (1406)
Q Consensus 789 QtIDmNQDnYlEEalKmRNlL~Ef~~~~~-------------g~~~~tIlG~REhIFT~svssLa~f~a~qE~sFvTl~q 855 (1406)
|||||||||||||||||||||+||++.+. +.+||||||+|||||||||||||||||+||||||||+|
T Consensus 293 Q~IDmNQDnYleE~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~~aIlG~RE~IFs~~vg~L~~~aa~qE~~F~Tl~q 372 (817)
T PF02364_consen 293 QTIDMNQDNYLEEALKMRNLLEEFEEMHGDSSSPYIPGIEEEGKRPVAILGFREHIFSENVGSLGDFAAGQEQSFGTLFQ 372 (817)
T ss_pred cccccchhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCceEecccceEecCCcchHHHHhhhhhHHHHHHHH
Confidence 99999999999999999999999998773 26899999999999999999999999999999999999
Q ss_pred HhhccccceeeecCCCcccccccccccCCccccccccccchhhhccccccccCceeeeeeeEEeccccccCcccccchhh
Q 000585 856 RLLAHPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEYIQVGKGRDVGLNQISLFEA 935 (1406)
Q Consensus 856 R~LA~Pl~vR~HYGHPDvfd~~F~~TRGGvSKAsk~inLsEDIfaG~N~~lRgG~I~h~EYiQcGKGRDvG~~qI~~Fea 935 (1406)
|+||+|+ |||||||||||||+||+||||||||||||||||||||||||+|||||||||||||||||||||||||++|||
T Consensus 373 R~la~p~-~rlHYGHPD~~n~~f~~TRGGvSKAsk~lhLsEDIfaG~n~~lRGG~i~h~ey~qcGKGRD~Gf~~I~~F~~ 451 (817)
T PF02364_consen 373 RTLANPL-VRLHYGHPDVFNRIFMTTRGGVSKASKGLHLSEDIFAGMNATLRGGRIKHCEYIQCGKGRDVGFNSILNFET 451 (817)
T ss_pred HHHhcch-hhccCCCchhhhhhheeccCccchHhhcccccHHHHHHHHHHhcCCceeehhhhhcccccccCchhhhhhHh
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCccccchhhhHhhccccchhhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCc---
Q 000585 936 KIANGNGEQTLSRDIYRLGHRFDFFRMLSCYVTTIGFYFSTLLTVLTVYVFLYGRLYLILSGLEKGLSTQPAIRDNK--- 1012 (1406)
Q Consensus 936 KIa~G~GEQ~LSRd~yrLG~~ldffR~LSfYyt~~GFy~n~~~~vltv~~fly~~lylalsg~e~~~~~~~~~~~~~--- 1012 (1406)
|||+|||||+||||+|||||||||||||||||||||||+|||+|++|||+|+| +|++|+|+++++. .|.++.+.
T Consensus 452 KI~~G~GEQ~LSRe~yrLg~~ld~~R~LSfyy~~~Gf~~n~~~i~lsv~~f~~--~~~~L~~l~~~~~-~~~~~~~~~~~ 528 (817)
T PF02364_consen 452 KIASGMGEQMLSREYYRLGTRLDFFRFLSFYYAHPGFYINNMFIVLSVYLFLY--VYLNLSGLEHESI-ICAYDKNTDVL 528 (817)
T ss_pred HhcCCccchhhhHHHHHhhccCCHHHHHHHHhcCccHhHhhHHHHHHHHHHHH--HHHHHHHHHHHHH-hhhhhcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999 6666778776653 24443331
Q ss_pred ------hhhh-----hccchHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhccceeEEEEeeeeEeEeccccccc
Q 000585 1013 ------PLQV-----ALASQSFVQIGFLMALPMMMEIGLERGFRNALSDFILMQLQLAAVFFTFSLGTKTHYYGRTLLHG 1081 (1406)
Q Consensus 1013 ------~l~~-----~l~~q~i~qlg~l~~lPm~~~~~lE~G~~~A~~~~~~~~l~l~~~F~~F~~gt~~h~~~~~il~G 1081 (1406)
.|+. .+++||+||+|+++++||++|+++|+|+++|+.+|++||+||||+||||+||||+|||++||+||
T Consensus 529 ~~~g~~~l~p~~~~~~~~~~si~q~g~l~~lPl~~q~~lE~G~~~A~~~~~~~~lslsp~F~vF~~qt~a~~~~~~l~~G 608 (817)
T PF02364_consen 529 EPIGCYNLQPVLDWIARNVQSIFQLGFLSFLPLIVQELLERGFWKALTRFFKHQLSLSPVFEVFSCQTYAHYFGRTLLHG 608 (817)
T ss_pred CCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcccchheeeeeehhhhhhhhhhhcC
Confidence 1333 35789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeccCCceEEeecchhhhhhhhhhhhHHHHHHHHHHHHHHHHhcccccchhhhhHHHHHHHHHHHHHhhcccccCCC
Q 000585 1082 GAEYRGTGRGFVVFHAKFAENYRLYSRSHFVKGIELMILLLVYHILGNSYRGVVAFLLITVSIWFMVGTWLFAPFLFNPS 1161 (1406)
Q Consensus 1082 GAkY~aTGRGFvi~h~~F~~~Y~~YarShf~~g~el~~lLivy~~~g~~~~~~~~y~~~t~s~W~~~~swl~aPf~FNP~ 1161 (1406)
|||||||||||||+|++|++||++|||||||+|+|+++||++|.++ +|...||++||+++|||+||||||||
T Consensus 609 GAkYiaTGRGF~i~r~~F~~lY~~YA~Sh~y~G~el~llLl~~~~~--------~y~~~~~~~W~~v~sll~aPFiFNP~ 680 (817)
T PF02364_consen 609 GAKYIATGRGFVITRIPFAELYSRYARSHFYKGFELLLLLLFYTLT--------MYIPATLSFWFLVISLLFAPFIFNPH 680 (817)
T ss_pred ccEEEecCCceEEEeccHHHHHHHHhHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 9999999999999999999999999999999999999999877775 89999999999999999999999999
Q ss_pred CccchhhhhhHHHHHHhhccCCCCCCCCCCchhHHHHHHHhhh--------------------hccCcchhhHHHHhhhh
Q 000585 1162 GFEWQKIIDDWTDWNKWISNRGGIGVPPEKSWESWWEKEQRHL--------------------LYSGKRGIIVEILLSLR 1221 (1406)
Q Consensus 1162 gF~w~k~~~D~~dw~~Wl~~~ggi~~~~~~SW~~Ww~~e~~~l--------------------r~tg~~~~~~eiil~LR 1221 (1406)
||+|+|+++||+||++||++ |++.++++||++||++|++|+ |+++....+.|+++.++
T Consensus 681 ~F~w~~~~~Dy~dw~~Wl~~--g~~~~~~~SW~~w~~~~~~~~tg~k~k~~~~~~e~~~~~~~r~~~~~~~~~ei~~~l~ 758 (817)
T PF02364_consen 681 QFDWQKFFVDYRDWLRWLSR--GNSRPHDNSWISWWREERSRITGFKRKILEDISEKRFGDHLRASFFNLLFSEIILPLR 758 (817)
T ss_pred cCchhHHHHhHHHHHHHHhc--CCCCccccccHHHHHHHHHHhccccceeeccchhccccccccceeeehhHHHHHHHHH
Confidence 99999999999999999994 688999999999999998754 33444455556666666
Q ss_pred hhhhheeeeeeeccccCCc
Q 000585 1222 FFMYQYGLVYHLSFTKSTQ 1240 (1406)
Q Consensus 1222 Ff~~qyGivy~L~I~~~~~ 1240 (1406)
+++++++.++++++..+.+
T Consensus 759 ~~~~~~~~y~finsq~~~~ 777 (817)
T PF02364_consen 759 FFIFQFIAYLFINSQNGVK 777 (817)
T ss_pred HHHHHHhhheEEEcccCCC
Confidence 6666666666666654433
No 3
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=98.08 E-value=1.1e-06 Score=109.79 Aligned_cols=42 Identities=60% Similarity=0.911 Sum_probs=38.3
Q ss_pred HHHHhhhhhcccccccccccccccHHHHHHHHhhhhccCchH
Q 000585 598 EEELRLWASYRGQTLTKTVRGMMYYRKALELQAFLDMAKDEE 639 (1406)
Q Consensus 598 ~~elRlWAS~RgQTL~RTVrGmM~Y~~ALkll~~lE~~~~~~ 639 (1406)
..++|.|||+|||||+|||+|||||++|++|+++++.+...+
T Consensus 101 ~~~~~~was~r~qtL~rtv~Gfm~~~~a~~LrtrLWASlR~Q 142 (817)
T PF02364_consen 101 EEELRLWASYRGQTLPRTVRGFMYYEPAYTLRTRLWASLRGQ 142 (817)
T ss_pred hhhhhHHHHhcccCCCchhhhhhhhhHHHHHHhhhhhccHHH
Confidence 567999999999999999999999999999999999875543
No 4
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=87.82 E-value=0.28 Score=64.03 Aligned_cols=188 Identities=19% Similarity=0.212 Sum_probs=114.8
Q ss_pred CCCCcCccchhhhhcccccccccCCccchHH-HHHhhhhhHHHHhhcCCCCCCceEeeccceeeccc-----chhhhhhc
Q 000585 770 GGKPENQNHAIIFTRGEGLQTIDMNQDNYME-ESLKMRNLLQEFLKKHDGVRYPTILGVREHIFTGS-----VSSLAWFM 843 (1406)
Q Consensus 770 EGKpeNQNhAiIFtRGE~lQtIDmNQDnYlE-EalKmRNlL~Ef~~~~~g~~~~tIlG~REhIFT~s-----vssLa~f~ 843 (1406)
.||..|-|||+=.++||++=+.|++. ..+ ++|+ +++..|.++. .+.+|+.+=+.++.. .+....+.
T Consensus 325 ~gKAGnLN~aL~~a~GEyIavlDAD~--ip~pdfL~--~~V~~f~~dP----~VglVQtp~~f~n~dp~~rnl~~~~~~~ 396 (852)
T PRK11498 325 HAKAGNINNALKYAKGEFVAIFDCDH--VPTRSFLQ--MTMGWFLKDK----KLAMMQTPHHFFSPDPFERNLGRFRKTP 396 (852)
T ss_pred cchHHHHHHHHHhCCCCEEEEECCCC--CCChHHHH--HHHHHHHhCC----CeEEEEcceeccCCchHHHhhHHHhhcc
Confidence 58999999999999999999999853 332 2222 4445665443 578888776665432 12211222
Q ss_pred ccchhhHHHHHHHhhccccceeeecCCCcccccccccccCCccccccccccchhhhccccccccCceeeeee-eEEeccc
Q 000585 844 SNQETSFVTIGQRLLAHPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHE-YIQVGKG 922 (1406)
Q Consensus 844 a~qE~sFvTl~qR~LA~Pl~vR~HYGHPDvfd~~F~~TRGGvSKAsk~inLsEDIfaG~N~~lRgG~I~h~E-YiQcGKG 922 (1406)
.-+| .|-...|+-... ....+--|+-=++.|.-...=||..-- -++||.--++....+|-++.|.. =...|-
T Consensus 397 ~e~~-~fy~~iq~g~~~-~~a~~~~Gs~aviRReaLeeVGGfd~~----titED~dlslRL~~~Gyrv~yl~~~~a~gl- 469 (852)
T PRK11498 397 NEGT-LFYGLVQDGNDM-WDATFFCGSCAVIRRKPLDEIGGIAVE----TVTEDAHTSLRLHRRGYTSAYMRIPQAAGL- 469 (852)
T ss_pred cchh-HHHHHHHhHHHh-hcccccccceeeeEHHHHHHhcCCCCC----ccCccHHHHHHHHHcCCEEEEEeccceeEE-
Confidence 2222 344455554332 334455677767777777777998742 37999999999999999999864 333332
Q ss_pred cccCcccccchh---hhhcCCCccccchhhhHhhccccchhhhhhhhhcccchhhhHH
Q 000585 923 RDVGLNQISLFE---AKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYVTTIGFYFSTL 977 (1406)
Q Consensus 923 RDvG~~qI~~Fe---aKIa~G~GEQ~LSRd~yrLG~~ldffR~LSfYyt~~GFy~n~~ 977 (1406)
.=.++..+- .+-+.| ..|.+.++---++..+.+..=+ +|....=++++.+
T Consensus 470 ---aPesl~~~~~QR~RWarG-~lQi~r~~~pl~~~gL~~~qRl-~y~~~~l~~l~g~ 522 (852)
T PRK11498 470 ---ATESLSAHIGQRIRWARG-MVQIFRLDNPLTGKGLKLAQRL-CYANAMLHFLSGI 522 (852)
T ss_pred ---CCCCHHHHHHHHHHHHHH-HHHHHHHhChhccCCCCHHHHH-HHHHHHHHHHHHH
Confidence 223555543 446777 5777766544567777774333 3333333444443
No 5
>PRK11204 N-glycosyltransferase; Provisional
Probab=84.96 E-value=2 Score=50.78 Aligned_cols=142 Identities=18% Similarity=0.142 Sum_probs=78.8
Q ss_pred EEEecCCCcccCCCCCcCccchhhhhcccccccccCCccchH-HHHHhhhhhHHHHhhcCCCCCCceEeeccceeecccc
Q 000585 758 YRIKLPGPAILGGGKPENQNHAIIFTRGEGLQTIDMNQDNYM-EESLKMRNLLQEFLKKHDGVRYPTILGVREHIFTGSV 836 (1406)
Q Consensus 758 YRIkLPG~pilGEGKpeNQNhAiIFtRGE~lQtIDmNQDnYl-EEalKmRNlL~Ef~~~~~g~~~~tIlG~REhIFT~sv 836 (1406)
--++.+.| .||+.|-|+|+-.++||++=.+|.+ +.+ .++|+ ++++.|+++. .+.+++.+-.+-. ..
T Consensus 112 ~~i~~~~n----~Gka~aln~g~~~a~~d~i~~lDaD--~~~~~d~L~--~l~~~~~~~~----~v~~v~g~~~~~~-~~ 178 (420)
T PRK11204 112 RVIHLAEN----QGKANALNTGAAAARSEYLVCIDGD--ALLDPDAAA--YMVEHFLHNP----RVGAVTGNPRIRN-RS 178 (420)
T ss_pred EEEEcCCC----CCHHHHHHHHHHHcCCCEEEEECCC--CCCChhHHH--HHHHHHHhCC----CeEEEECCceecc-ch
Confidence 33444554 4799999999999999999998754 444 33443 6666776433 3445543322222 12
Q ss_pred hhhhhhcccchhhHHHHHH---HhhccccceeeecCCCcccccccccccCCccccccccccchhhhccccccccCceeee
Q 000585 837 SSLAWFMSNQETSFVTIGQ---RLLAHPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTH 913 (1406)
Q Consensus 837 ssLa~f~a~qE~sFvTl~q---R~LA~Pl~vR~HYGHPDvfd~~F~~TRGGvSKAsk~inLsEDIfaG~N~~lRgG~I~h 913 (1406)
+.++....++-.+...+.+ +.+..+ -..-|+==.+.|.....-||...- .++||.--++-...+|.++.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~G~~~~~rr~~l~~vgg~~~~----~~~ED~~l~~rl~~~G~~i~~ 251 (420)
T PRK11204 179 TLLGRIQVGEFSSIIGLIKRAQRVYGRV---FTVSGVITAFRKSALHEVGYWSTD----MITEDIDISWKLQLRGWDIRY 251 (420)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHhCCc---eEecceeeeeeHHHHHHhCCCCCC----cccchHHHHHHHHHcCCeEEe
Confidence 2333332222222222222 222111 111133223444444445666532 368999999998899999998
Q ss_pred eeeEEe
Q 000585 914 HEYIQV 919 (1406)
Q Consensus 914 ~EYiQc 919 (1406)
+.-..|
T Consensus 252 ~p~~~~ 257 (420)
T PRK11204 252 EPRALC 257 (420)
T ss_pred ccccEE
Confidence 776555
No 6
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=84.73 E-value=5.2 Score=48.39 Aligned_cols=136 Identities=18% Similarity=0.112 Sum_probs=70.4
Q ss_pred CCCCcCccchhhhhcccccccccCCccchH-HHHHhhhhhHHHHhhcCCCCCCceEeeccceeecccchhhhhhcccchh
Q 000585 770 GGKPENQNHAIIFTRGEGLQTIDMNQDNYM-EESLKMRNLLQEFLKKHDGVRYPTILGVREHIFTGSVSSLAWFMSNQET 848 (1406)
Q Consensus 770 EGKpeNQNhAiIFtRGE~lQtIDmNQDnYl-EEalKmRNlL~Ef~~~~~g~~~~tIlG~REhIFT~svssLa~f~a~qE~ 848 (1406)
.||+.+.|+|+..++||++-++|+ |+.+ .+++ +.+.+.|+++. .+.+++.+-.+...+ +.++....++-.
T Consensus 141 ~Gka~AlN~gl~~a~~d~iv~lDA--D~~~~~d~L--~~lv~~~~~~~----~~g~v~g~~~~~~~~-~~~~~~~~~e~~ 211 (444)
T PRK14583 141 QGKAIALRMGAAAARSEYLVCIDG--DALLDKNAV--PYLVAPLIANP----RTGAVTGNPRIRTRS-TLIGRVQVGEFS 211 (444)
T ss_pred CCHHHHHHHHHHhCCCCEEEEECC--CCCcCHHHH--HHHHHHHHhCC----CeEEEEccceecCCC-cchhhHHHHHHH
Confidence 489999999999999999999986 4444 3333 35666675432 233443322222221 222322222212
Q ss_pred hHHHHHHHhhccccceeee-cCCCcccccccccccCCccccccccccchhhhccccccccCceeeeeeeEEe
Q 000585 849 SFVTIGQRLLAHPLKVRFH-YGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEYIQV 919 (1406)
Q Consensus 849 sFvTl~qR~LA~Pl~vR~H-YGHPDvfd~~F~~TRGGvSKAsk~inLsEDIfaG~N~~lRgG~I~h~EYiQc 919 (1406)
++..+.+|.... .+.-+- =|+==.|.|.-...=||-+- -.+.||+--|+-...+|.+|.+++-..|
T Consensus 212 ~~~~~~~~~~~~-~g~~~~~sG~~~~~rr~al~~vGg~~~----~~i~ED~dl~~rl~~~G~~i~~~p~a~~ 278 (444)
T PRK14583 212 SIIGLIKRTQRV-YGQVFTVSGVVAAFRRRALADVGYWSP----DMITEDIDISWKLQLKHWSVFFEPRGLC 278 (444)
T ss_pred HHHHHHHHHHHH-hCCceEecCceeEEEHHHHHHcCCCCC----CcccccHHHHHHHHHcCCeEEEeeccEE
Confidence 222223332211 000000 01111222222222344431 1478999999999999999998875433
No 7
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=61.67 E-value=21 Score=37.76 Aligned_cols=101 Identities=17% Similarity=0.104 Sum_probs=65.4
Q ss_pred CCCcCccchhhhhcccccccccCCccchH-HHHHhhhhhHHHHhhcCCCCCCceEeeccceeecccchhhhhhcccchhh
Q 000585 771 GKPENQNHAIIFTRGEGLQTIDMNQDNYM-EESLKMRNLLQEFLKKHDGVRYPTILGVREHIFTGSVSSLAWFMSNQETS 849 (1406)
Q Consensus 771 GKpeNQNhAiIFtRGE~lQtIDmNQDnYl-EEalKmRNlL~Ef~~~~~g~~~~tIlG~REhIFT~svssLa~f~a~qE~s 849 (1406)
||..|.|+++-..+||++=.+|.. ..+ .++|+ .+++.+.. + .+.++|-+
T Consensus 73 ~~~~~~n~g~~~a~~d~i~~~D~D--~~~~~~~l~--~l~~~~~~-~----~~~~v~~~--------------------- 122 (196)
T cd02520 73 PKVNNLIKGYEEARYDILVISDSD--ISVPPDYLR--RMVAPLMD-P----GVGLVTCL--------------------- 122 (196)
T ss_pred HhHHHHHHHHHhCCCCEEEEECCC--ceEChhHHH--HHHHHhhC-C----CCCeEEee---------------------
Confidence 577889999999999999998874 333 33332 45555531 1 24455543
Q ss_pred HHHHHHHhhccccceeeecCCCcccccccccccCCccccccccccchhhhccccccccCceeeeeeeEEe
Q 000585 850 FVTIGQRLLAHPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEYIQV 919 (1406)
Q Consensus 850 FvTl~qR~LA~Pl~vR~HYGHPDvfd~~F~~TRGGvSKAsk~inLsEDIfaG~N~~lRgG~I~h~EYiQc 919 (1406)
...|+==.+.|-.+-.-||-+. ....+.||..-++....+|.+|.+++...+
T Consensus 123 ----------------~~~g~~~~~r~~~~~~~ggf~~--~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~ 174 (196)
T cd02520 123 ----------------CAFGKSMALRREVLDAIGGFEA--FADYLAEDYFLGKLIWRLGYRVVLSPYVVM 174 (196)
T ss_pred ----------------cccCceeeeEHHHHHhccChHH--HhHHHHHHHHHHHHHHHcCCeEEEcchhee
Confidence 2233333455555555567632 123468999999999999999999877544
No 8
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=59.43 E-value=53 Score=40.06 Aligned_cols=42 Identities=26% Similarity=0.474 Sum_probs=33.0
Q ss_pred CCCCcCccchhhhhcccccccccCCccchHH-HHHhhhhhHHHHhhc
Q 000585 770 GGKPENQNHAIIFTRGEGLQTIDMNQDNYME-ESLKMRNLLQEFLKK 815 (1406)
Q Consensus 770 EGKpeNQNhAiIFtRGE~lQtIDmNQDnYlE-EalKmRNlL~Ef~~~ 815 (1406)
.||+.+-|+|+=.++||++ +=|++|+.++ ++++ ++++.|+++
T Consensus 117 ~Gka~AlN~gl~~s~g~~v--~~~DaD~~~~~d~L~--~l~~~f~~~ 159 (439)
T TIGR03111 117 QGKAKALNAAIYNSIGKYI--IHIDSDGKLHKDAIK--NMVTRFENN 159 (439)
T ss_pred CCHHHHHHHHHHHccCCEE--EEECCCCCcChHHHH--HHHHHHHhC
Confidence 5899999999999999995 5556888874 4554 788888754
No 9
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=44.74 E-value=17 Score=38.52 Aligned_cols=138 Identities=18% Similarity=0.127 Sum_probs=79.7
Q ss_pred CCCCcCccchhhhhcccccccccCCccchHHHHHhhhhhHHHHhhcCCCCCCceEeeccceeecccch-hhhhhcccchh
Q 000585 770 GGKPENQNHAIIFTRGEGLQTIDMNQDNYMEESLKMRNLLQEFLKKHDGVRYPTILGVREHIFTGSVS-SLAWFMSNQET 848 (1406)
Q Consensus 770 EGKpeNQNhAiIFtRGE~lQtIDmNQDnYlEEalKmRNlL~Ef~~~~~g~~~~tIlG~REhIFT~svs-sLa~f~a~qE~ 848 (1406)
.||.-|-|+|+=..+||++-.+|. |.++++. .+.++++.+++.. .+.+++.+.+...++.. .+..-......
T Consensus 70 ~~~~~~~n~~~~~a~~d~i~~lD~--D~~~~~~-~l~~l~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 142 (234)
T cd06421 70 HAKAGNLNNALAHTTGDFVAILDA--DHVPTPD-FLRRTLGYFLDDP----KVALVQTPQFFYNPDPFDWLADGAPNEQE 142 (234)
T ss_pred CCcHHHHHHHHHhCCCCEEEEEcc--ccCcCcc-HHHHHHHHHhcCC----CeEEEecceEEecCCcchhHHHHHHHHHH
Confidence 467888999999999999999985 7888653 5568888886522 45666655444333321 22222222333
Q ss_pred hHHHHHHHhhccccceeeecCCCcccccccccccCCccccccccccchhhhccccccccCceeeeeeeEEe
Q 000585 849 SFVTIGQRLLAHPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEYIQV 919 (1406)
Q Consensus 849 sFvTl~qR~LA~Pl~vR~HYGHPDvfd~~F~~TRGGvSKAsk~inLsEDIfaG~N~~lRgG~I~h~EYiQc 919 (1406)
.|.+..+... ++.++-.=-|.-=.+.|..+..=||... ..+.||..-+......|.+|.+.....|
T Consensus 143 ~~~~~~~~~~-~~~~~~~~~g~~~~~r~~~~~~ig~~~~----~~~~eD~~l~~r~~~~g~~i~~~~~~~~ 208 (234)
T cd06421 143 LFYGVIQPGR-DRWGAAFCCGSGAVVRREALDEIGGFPT----DSVTEDLATSLRLHAKGWRSVYVPEPLA 208 (234)
T ss_pred HHHHHHHHHH-hhcCCceecCceeeEeHHHHHHhCCCCc----cceeccHHHHHHHHHcCceEEEecCccc
Confidence 3332221111 1011111113333444444444466652 2457999999999999999988765544
No 10
>PF12823 DUF3817: Domain of unknown function (DUF3817); InterPro: IPR023845 This domain is associated with, strictly bacterial integral membrane proteins. It occurs in proteins that on rare occasions are fused to transporter domains such as the major facilitator superfamily domain. Of three invariant residues, two occur as a His-Gly dipeptide in the middle of three predicted transmembrane helices.
Probab=34.68 E-value=1.3e+02 Score=29.95 Aligned_cols=69 Identities=20% Similarity=0.403 Sum_probs=47.1
Q ss_pred ehhhHHHHHHHHHHHHhhhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHccccchhHHHHHHH-HHHhhH
Q 000585 1244 VYGASWVVIIFVLLLVKGMSVGRRRFSANFQLLFRMIKGLVFISFITIFIILIAIPHMTFKDILLCIL-AFMPTG 1317 (1406)
Q Consensus 1244 Vy~lSW~vi~~v~~llk~vs~~rrk~sa~~ql~~Rlik~llfl~~vavlv~l~~l~~lti~D~fa~lL-AflptG 1317 (1406)
+=|.||++++.+...+|.+.-. . ..-...=.+.+++|++.+.+.+.+..-.+|+.......++ |++|.|
T Consensus 12 ~Egisll~Ll~iamplKy~~~~-~----~~v~~~G~iHG~lF~~Yl~~~~~~~~~~rW~~~~~~~~llas~iPfg 81 (92)
T PF12823_consen 12 LEGISLLLLLFIAMPLKYLAGN-P----EAVKIIGPIHGFLFMLYLVAALDLASKYRWSLKRTLLALLASVIPFG 81 (92)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-C----chhhhcchhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHccccc
Confidence 3477888888666666643311 0 0111233478899999999998888889999998666665 577765
No 11
>PHA03048 IMV membrane protein; Provisional
Probab=31.96 E-value=73 Score=31.95 Aligned_cols=30 Identities=27% Similarity=0.367 Sum_probs=18.8
Q ss_pred cchhhhhhhhhcccchhhhHHHHHHHHHHH
Q 000585 957 FDFFRMLSCYVTTIGFYFSTLLTVLTVYVF 986 (1406)
Q Consensus 957 ldffR~LSfYyt~~GFy~n~~~~vltv~~f 986 (1406)
||.+++++=||+++=.-==-++++-++++|
T Consensus 1 MDi~~~~~ny~S~vli~GIiLL~~aCIfAf 30 (93)
T PHA03048 1 MDIMGMISNYFSTALIGGIILLAASCIFAF 30 (93)
T ss_pred CCHHHHhhcccchHHHHHHHHHHHHHHHhh
Confidence 699999999999873333333344444443
No 12
>PRK10547 chemotaxis protein CheA; Provisional
Probab=31.17 E-value=2.3e+02 Score=37.33 Aligned_cols=88 Identities=14% Similarity=0.194 Sum_probs=62.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcCcccceeccCcchhHHHHHHHHHHHHhhCCCchhhHH
Q 000585 342 YMHRAVQECYASFKIIINVLVLGEREKEVINEIFSKVDEHIREDNLLTELNMSALPSLYEQCVELIECLLANKKEDKDRV 421 (1406)
Q Consensus 342 y~~~AV~e~y~s~k~il~~ll~~~~~~~ii~~i~~~i~~~i~~~~~~~~f~~~~Lp~l~~~~~~L~~~L~~~~~~~~~~v 421 (1406)
++.+| +|..+.+...|..|=....|...|+++|+.+...--...+ +.+..+-.+..++.+++..++++.-.-...+
T Consensus 10 F~~Ea-~E~l~~le~~Ll~LE~~p~d~e~in~lFRa~HTiKG~a~~---~g~~~i~~l~H~~E~lld~vR~g~l~~~~~~ 85 (670)
T PRK10547 10 FFDEA-DELLADMEQHLLVLDPEAPDAEQLNAIFRAAHSIKGGAGT---FGFTVLQETTHLMENLLDEARRGEMQLNTDI 85 (670)
T ss_pred HHHHH-HHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhhhhHHhh---cCchHHHHHHHHHHHHHHHHHCCCCCCCHHH
Confidence 44444 4555555666766666667888999999998876555544 5688889999999999999998765444566
Q ss_pred HHHHHHHHHHHH
Q 000585 422 VIVLLNMLEVVT 433 (1406)
Q Consensus 422 v~~l~~l~evv~ 433 (1406)
++.+.+-.+.+.
T Consensus 86 ~dlll~~~D~l~ 97 (670)
T PRK10547 86 INLFLETKDIMQ 97 (670)
T ss_pred HHHHHHHHHHHH
Confidence 666655555443
No 13
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=29.95 E-value=1.6e+02 Score=35.10 Aligned_cols=130 Identities=15% Similarity=0.116 Sum_probs=67.3
Q ss_pred CCCcCccchhhhhcccccccccCCccchH-HHHHhhhhhHHHHhhcCCCCCCceEeeccceeecccchhh-hhhccc-ch
Q 000585 771 GKPENQNHAIIFTRGEGLQTIDMNQDNYM-EESLKMRNLLQEFLKKHDGVRYPTILGVREHIFTGSVSSL-AWFMSN-QE 847 (1406)
Q Consensus 771 GKpeNQNhAiIFtRGE~lQtIDmNQDnYl-EEalKmRNlL~Ef~~~~~g~~~~tIlG~REhIFT~svssL-a~f~a~-qE 847 (1406)
||..|.++++--++||++=..|.+ ... .+.| +++++.|+.. .+.+++-. + .......+ +.+.+. .+
T Consensus 113 ~K~~~l~~~~~~a~ge~i~~~DaD--~~~~p~~L--~~lv~~~~~~-----~v~~V~~~-~-~~~~~~~~~~~l~~~~~~ 181 (373)
T TIGR03472 113 RKVSNLINMLPHARHDILVIADSD--ISVGPDYL--RQVVAPLADP-----DVGLVTCL-Y-RGRPVPGFWSRLGAMGIN 181 (373)
T ss_pred hHHHHHHHHHHhccCCEEEEECCC--CCcChhHH--HHHHHHhcCC-----CcceEecc-c-cCCCCCCHHHHHHHHHhh
Confidence 688899988888999999999985 333 4444 3667788522 23333221 1 11111111 111000 00
Q ss_pred hhHHHHHHHhhccccceeeecCCCc--ccccccccccCCccccccccccchhhhccccccccCceeeeeee
Q 000585 848 TSFVTIGQRLLAHPLKVRFHYGHPD--VFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEY 916 (1406)
Q Consensus 848 ~sFvTl~qR~LA~Pl~vR~HYGHPD--vfd~~F~~TRGGvSKAsk~inLsEDIfaG~N~~lRgG~I~h~EY 916 (1406)
..|.-- -..+.+++ +.+.++.- .+-|.....-||...- .-++.||..-|.....+|.+|..++.
T Consensus 182 ~~~~~~--~~~~~~~~-~~~~~~G~~~a~RR~~l~~iGGf~~~--~~~~~ED~~l~~~i~~~G~~v~~~~~ 247 (373)
T TIGR03472 182 HNFLPS--VMVARALG-RARFCFGATMALRRATLEAIGGLAAL--AHHLADDYWLGELVRALGLRVVLAPV 247 (373)
T ss_pred hhhhHH--HHHHHhcc-CCccccChhhheeHHHHHHcCChHHh--cccchHHHHHHHHHHHcCCeEEecch
Confidence 111000 00111111 11222221 3455555566777421 12467999999999999999987654
No 14
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=28.66 E-value=54 Score=41.31 Aligned_cols=26 Identities=15% Similarity=-0.003 Sum_probs=23.8
Q ss_pred ccchhhhccccccccCceeeeeeeEE
Q 000585 893 NLSEDIFAGFNSTLREGNVTHHEYIQ 918 (1406)
Q Consensus 893 nLsEDIfaG~N~~lRgG~I~h~EYiQ 918 (1406)
+|.||+--|+....+|.++.++.+--
T Consensus 260 sLTED~dLglRL~~~G~rv~y~p~ai 285 (504)
T PRK14716 260 SLTEDYDIGLRLKRAGFRQIFVRVRA 285 (504)
T ss_pred CcchHHHHHHHHHHCCCEEEEecccc
Confidence 79999999999999999999987763
No 15
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=28.21 E-value=55 Score=38.69 Aligned_cols=134 Identities=16% Similarity=0.136 Sum_probs=77.1
Q ss_pred EEEEecCCCcccCCCCCcCccchhhhhcccccccccCC---ccchHHHHHhhhhhHHHHhhcCCCCCCceEeeccceeec
Q 000585 757 IYRIKLPGPAILGGGKPENQNHAIIFTRGEGLQTIDMN---QDNYMEESLKMRNLLQEFLKKHDGVRYPTILGVREHIFT 833 (1406)
Q Consensus 757 iYRIkLPG~pilGEGKpeNQNhAiIFtRGE~lQtIDmN---QDnYlEEalKmRNlL~Ef~~~~~g~~~~tIlG~REhIFT 833 (1406)
.+|+--| +.-..||+.++|.|+=..+||++=++|+. -.+++.|+.+ .|+.... .+++|.+.+...
T Consensus 112 ~~~~~~~--~~~~~gK~~al~~~l~~~~~d~V~~~DaD~~~~~d~l~~~~~------~f~~~~~----~~v~~~~~~~~~ 179 (439)
T COG1215 112 NFRVIYP--EKKNGGKAGALNNGLKRAKGDVVVILDADTVPEPDALRELVS------PFEDPPV----GAVVGTPRIRNR 179 (439)
T ss_pred ceEEEec--cccCccchHHHHHHHhhcCCCEEEEEcCCCCCChhHHHHHHh------hhcCCCe----eEEeCCceeeec
Confidence 4444433 46788999999999999999999999986 3566666555 7764331 257776655442
Q ss_pred cc-chhhhhhcccchhhHHHHHHHhhccccceeeecCCCcccccccccccCCcccccc-----------ccccchhhhcc
Q 000585 834 GS-VSSLAWFMSNQETSFVTIGQRLLAHPLKVRFHYGHPDVFDRLFHLTRGGVSKASK-----------VINLSEDIFAG 901 (1406)
Q Consensus 834 ~s-vssLa~f~a~qE~sFvTl~qR~LA~Pl~vR~HYGHPDvfd~~F~~TRGGvSKAsk-----------~inLsEDIfaG 901 (1406)
.. .+.++..-........-... ..+...| ...+.+|.+.|=| .-.+.||.=-+
T Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~-------~~~~~~g--------~~~~~~G~~~~~rr~aL~~~g~~~~~~i~ED~~lt 244 (439)
T COG1215 180 PDPSNLLGRIQAIEYLSAFYFRL-------RAASKGG--------LISFLSGSSSAFRRSALEEVGGWLEDTITEDADLT 244 (439)
T ss_pred CChhhhcchhcchhhhhhHHHhh-------hhhhhcC--------CeEEEcceeeeEEHHHHHHhCCCCCCceeccHHHH
Confidence 21 12222111111111111111 1122233 3344445554433 23567888778
Q ss_pred ccccccCceeeeeeeE
Q 000585 902 FNSTLREGNVTHHEYI 917 (1406)
Q Consensus 902 ~N~~lRgG~I~h~EYi 917 (1406)
+-...+|.++.++.--
T Consensus 245 ~~l~~~G~~~~~~~~~ 260 (439)
T COG1215 245 LRLHLRGYRVVYVPEA 260 (439)
T ss_pred HHHHHCCCeEEEeecc
Confidence 7777999999997654
No 16
>CHL00032 ndhA NADH dehydrogenase subunit 1
Probab=26.50 E-value=7.5e+02 Score=30.40 Aligned_cols=27 Identities=19% Similarity=0.290 Sum_probs=21.0
Q ss_pred chHHHHHHH--HHHHHHHHHHHHHHHHHh
Q 000585 1336 IWESIKTLA--RGYEIVMGLLLFTPVAFL 1362 (1406)
Q Consensus 1336 ~W~~Vr~LA--r~yD~~mG~ilf~PIa~L 1362 (1406)
.=++.|+++ -.||..++++++++...-
T Consensus 158 ~iGa~R~~~q~isyEv~l~l~ii~~~l~~ 186 (363)
T CHL00032 158 FLGGLRAAAQSISYEIPLTLCVLSISLLS 186 (363)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 335778777 489999999999987653
No 17
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=26.30 E-value=78 Score=41.32 Aligned_cols=158 Identities=18% Similarity=0.161 Sum_probs=93.7
Q ss_pred CCCcCccchhhhhcccccccccCCccchH-HHHHhhhhhHHHHhhcCCCCCCceEeeccceeecc-----cchhhhhhcc
Q 000585 771 GKPENQNHAIIFTRGEGLQTIDMNQDNYM-EESLKMRNLLQEFLKKHDGVRYPTILGVREHIFTG-----SVSSLAWFMS 844 (1406)
Q Consensus 771 GKpeNQNhAiIFtRGE~lQtIDmNQDnYl-EEalKmRNlL~Ef~~~~~g~~~~tIlG~REhIFT~-----svssLa~f~a 844 (1406)
||+.|=|||+=.++||++=+.|+.. .. .++|+ +++..|+++. .+++++.+=+.++. +.+. ...+.
T Consensus 215 ~KAgnLN~al~~a~gd~Il~lDAD~--v~~pd~L~--~~v~~f~~dp----~v~~Vqtp~~f~~p~~~~~nl~~-~~~~~ 285 (713)
T TIGR03030 215 AKAGNINNALKHTDGELILIFDADH--VPTRDFLQ--RTVGWFVEDP----KLFLVQTPHFFVSPDPIERNLGT-FRRMP 285 (713)
T ss_pred CChHHHHHHHHhcCCCEEEEECCCC--CcChhHHH--HHHHHHHhCC----CEEEEeCCeeccCCCHHhhhhHH-HHHhh
Confidence 6999999999999999999999754 33 33332 5556775443 46777665333321 2222 12222
Q ss_pred cchhhHHHHHHHhhccccceeeecCCCcccccccccccCCccccccccccchhhhccccccccCceeeeeeeEEeccccc
Q 000585 845 NQETSFVTIGQRLLAHPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEYIQVGKGRD 924 (1406)
Q Consensus 845 ~qE~sFvTl~qR~LA~Pl~vR~HYGHPDvfd~~F~~TRGGvSKAsk~inLsEDIfaG~N~~lRgG~I~h~EYiQcGKGRD 924 (1406)
++...|-...|+-... .+..+.-|+-=++.|.-...=||..- -.++||.--|+-..-+|-++.+..=..+- |
T Consensus 286 ~e~~~f~~~i~~g~~~-~~~~~~~Gs~~~iRR~al~~iGGf~~----~~vtED~~l~~rL~~~G~~~~y~~~~~~~-g-- 357 (713)
T TIGR03030 286 NENELFYGLIQDGNDF-WNAAFFCGSAAVLRREALDEIGGIAG----ETVTEDAETALKLHRRGWNSAYLDRPLIA-G-- 357 (713)
T ss_pred hHHHHHHHHHHHHHhh-hCCeeecCceeEEEHHHHHHcCCCCC----CCcCcHHHHHHHHHHcCCeEEEecccccc-c--
Confidence 2222333333443332 33444557766777776667788863 34799999999988899998887644441 1
Q ss_pred cCcccccchhh---hhcCCCcccc
Q 000585 925 VGLNQISLFEA---KIANGNGEQT 945 (1406)
Q Consensus 925 vG~~qI~~Fea---KIa~G~GEQ~ 945 (1406)
..=.++..|-. .-+.||-+..
T Consensus 358 ~~p~sl~~~~~Qr~RWa~G~~qi~ 381 (713)
T TIGR03030 358 LAPETLSGHIGQRIRWAQGMMQIF 381 (713)
T ss_pred cCCCCHHHHHHHHHHHhcChHHHH
Confidence 22234444432 3466665543
No 18
>PF11457 DUF3021: Protein of unknown function (DUF3021); InterPro: IPR021560 This is a bacterial family of uncharacterised proteins.
Probab=25.22 E-value=7.5e+02 Score=25.32 Aligned_cols=86 Identities=22% Similarity=0.388 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHcc------ccchhHHHHHHHHHHhhHHHHHHHHHHhhhchhcccchHHHHHHHHHHH
Q 000585 1275 LLFRMIKGLVFISFITIFIILIAIP------HMTFKDILLCILAFMPTGWGLLLIAQACKPLMQRGGIWESIKTLARGYE 1348 (1406)
Q Consensus 1275 l~~Rlik~llfl~~vavlv~l~~l~------~lti~D~fa~lLAflptGWGll~Iaqa~~p~~~~~~~W~~Vr~LAr~yD 1348 (1406)
...+.+.++.+.+++.+++.++.-. ..+..+....+.+ +-.|...-.....+ +. .-|...+ +-..+
T Consensus 7 ~i~~~~iGi~ig~~i~li~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ig~~~gl~s~if----~~-e~~s~~~--~~iiH 78 (136)
T PF11457_consen 7 IIKGFLIGIGIGSFISLIISLFYGQGFYPSFPISVSSILSVLVA-VLIGAVFGLASLIF----EI-ERWSLLK--QTIIH 78 (136)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCcCCccHHHHHHHHHH-HHHHHHHHHHHHHH----cc-cchhHHH--HHHHH
Confidence 3445555655555555555444443 2344555555533 22222211112211 22 3355444 35688
Q ss_pred HHHHHHHHHHHHHhh-hcccc
Q 000585 1349 IVMGLLLFTPVAFLA-WFPFV 1368 (1406)
Q Consensus 1349 ~~mG~ilf~PIa~LS-wfPfv 1368 (1406)
++...+++.|++.+. |+|.-
T Consensus 79 f~~~~~~~~~~~~~~gW~~~~ 99 (136)
T PF11457_consen 79 FIITYAIFLILAYLLGWFPLS 99 (136)
T ss_pred HHHHHHHHHHHHHHhCCcchh
Confidence 999999999999998 99984
No 19
>PF10569 Thiol-ester_cl: Alpha-macro-globulin thiol-ester bond-forming region; InterPro: IPR019565 This entry contains serum complement C3 and C4 precursors and alpha-macrogrobulins. The alpha-macroglobulin (aM) family of proteins includes protease inhibitors [], typified by the human tetrameric a2-macroglobulin (a2M); they belong to the MEROPS proteinase inhibitor family I39, clan IL. These protease inhibitors share several defining properties, which include (i) the ability to inhibit proteases from all catalytic classes, (ii) the presence of a 'bait region' and a thiol ester, (iii) a similar protease inhibitory mechanism and (iv) the inactivation of the inhibitory capacity by reaction of the thiol ester with small primary amines. aM protease inhibitors inhibit by steric hindrance []. The mechanism involves protease cleavage of the bait region, a segment of the aM that is particularly susceptible to proteolytic cleavage, which initiates a conformational change such that the aM collapses about the protease. In the resulting aM-protease complex, the active site of the protease is sterically shielded, thus substantially decreasing access to protein substrates. Two additional events occur as a consequence of bait region cleavage, namely (i) the h-cysteinyl-g-glutamyl thiol ester becomes highly reactive and (ii) a major conformational change exposes a conserved COOH-terminal receptor binding domain [] (RBD). RBD exposure allows the aM protease complex to bind to clearance receptors and be removed from circulation []. Tetrameric, dimeric, and, more recently, monomeric aM protease inhibitors have been identified [, ]. This short highly conserved region of proteinase-binding alpha-macro-globulins contains the cysteine and a glutamine of a thiol-ester bond that is cleaved at the moment of proteinase binding, and mediates the covalent binding of the alpha-macro-globulin to the proteinase. The GCGEQ motif is highly conserved. ; PDB: 2B39_B 2PN5_A 4ACQ_C 1HZF_A 2WIN_H 2I07_B 2ICF_B 2XWJ_D 3G6J_B 2NOJ_C ....
Probab=22.51 E-value=31 Score=28.23 Aligned_cols=11 Identities=55% Similarity=0.724 Sum_probs=8.2
Q ss_pred cCCCccccchh
Q 000585 938 ANGNGEQTLSR 948 (1406)
Q Consensus 938 a~G~GEQ~LSR 948 (1406)
-.|+|||++|+
T Consensus 9 P~GCgEQtm~~ 19 (31)
T PF10569_consen 9 PYGCGEQTMSS 19 (31)
T ss_dssp --SSTTHHHHH
T ss_pred CCCcHHHHHHH
Confidence 46999999987
No 20
>PF14518 Haem_oxygenas_2: Iron-containing redox enzyme; PDB: 3BJD_B.
Probab=22.48 E-value=51 Score=32.18 Aligned_cols=75 Identities=29% Similarity=0.541 Sum_probs=45.0
Q ss_pred cCCCCCcCccchhhhhcccccccccCCcc------chHHHHHhhhhhHHHHhhcCCCCCCceEeeccceeecccchhhhh
Q 000585 768 LGGGKPENQNHAIIFTRGEGLQTIDMNQD------NYMEESLKMRNLLQEFLKKHDGVRYPTILGVREHIFTGSVSSLAW 841 (1406)
Q Consensus 768 lGEGKpeNQNhAiIFtRGE~lQtIDmNQD------nYlEEalKmRNlL~Ef~~~~~g~~~~tIlG~REhIFT~svssLa~ 841 (1406)
.|+|.|+ |||.-+|-| .++.++++.+ .+..|+....|..--+-... ...+.++ |
T Consensus 9 ~G~G~~~-~~H~~Lf~~--~L~~~Gi~~~~~~~~~~~~~~~~~~~n~~~~~~~~~--~~~~~~l--------------G- 68 (106)
T PF14518_consen 9 MGNGDPE-RSHPELFRR--FLRALGIDDEPGAYRDPYPPETLALINLFLALCLHR--SHYPEAL--------------G- 68 (106)
T ss_dssp TTTT-GG-G-HHHHHHH--HHHHTT-----TT-----HHHHHHHHHHHHHH--H---SSTHHHH--------------H-
T ss_pred hCCCCcc-ccHHHHHHH--HHHHcCCCCccccccccCCHHHHHHHHHHHHhcccc--hhHHHHH--------------H-
Confidence 5899987 599999987 8888888876 67789999888776664321 1122232 2
Q ss_pred hcccchhhHHHHHHHhhccccc
Q 000585 842 FMSNQETSFVTIGQRLLAHPLK 863 (1406)
Q Consensus 842 f~a~qE~sFvTl~qR~LA~Pl~ 863 (1406)
++.+-|.+.-...+++..- ++
T Consensus 69 ~~~~~E~~~~~~~~~~~~~-l~ 89 (106)
T PF14518_consen 69 ALLATESSVPQIYRRLIKG-LR 89 (106)
T ss_dssp HHHHHHTHHHHHHHHHHHH-HH
T ss_pred HHHHHhhcChHHHHHHHHH-HH
Confidence 3448888888887766553 55
No 21
>PF07304 SRA1: Steroid receptor RNA activator (SRA1); InterPro: IPR009917 This entry consists of several hypothetical mammalian steroid receptor RNA activator proteins. The SRA-RNAs encode stable proteins that are widely expressed and upregulated in breast cancer cell lines. SRA-RNA is a steroid receptor co-activator which acts as a functional RNA. This domain is also found at the C terminus of Sec31, a component of the coat protein complex II (COPII, which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). COPII has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. ; PDB: 2YRU_A.
Probab=21.48 E-value=4.3e+02 Score=28.67 Aligned_cols=66 Identities=15% Similarity=0.328 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHhcCCchhhHHHHHH---HHHHHHHHhcCcccceeccCcchhHHHHHHHHHHHHhhCCCchhhHH
Q 000585 347 VQECYASFKIIINVLVLGEREKEVINEI---FSKVDEHIREDNLLTELNMSALPSLYEQCVELIECLLANKKEDKDRV 421 (1406)
Q Consensus 347 V~e~y~s~k~il~~ll~~~~~~~ii~~i---~~~i~~~i~~~~~~~~f~~~~Lp~l~~~~~~L~~~L~~~~~~~~~~v 421 (1406)
+.+.+..+..++..+- ....+++++++ ++.+.+++++|.+ -..+.+++.+|.+.|.+.+-+...+|
T Consensus 44 i~~~~~~L~~v~~~~~-~~~~kr~~~D~~KRL~iLfd~ln~g~L--------s~~v~~~L~~L~~aL~~~d~~~A~~I 112 (157)
T PF07304_consen 44 IEEVLRELQRVLEACP-PSIKKRVVDDIEKRLNILFDHLNNGKL--------SKPVVDKLHQLAQALQARDYDAADEI 112 (157)
T ss_dssp HHHHHHHHHHHHHHHH-TTS-HHHHHHHHHHHHHHHHHHHHT-S---------HHHHHHHHHHHHHHHHT-HHHHHHH
T ss_pred HHHHHHHHHHHHHHcc-cccchhHHHHHHHHHHHHHHHHhcCCC--------CHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 4445555555555443 33344433333 3345667777776 35589999999999999876544443
No 22
>PF15469 Sec5: Exocyst complex component Sec5
Probab=20.97 E-value=2.5e+02 Score=30.25 Aligned_cols=64 Identities=17% Similarity=0.268 Sum_probs=43.8
Q ss_pred hHHHHHHHHhhcC---CcHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhc
Q 000585 316 IPIALDMAKDSNG---RDRELKKRLNSDNYMHRAVQECYASFKIIINVLVLGEREKEVINEIFSKVDEHIRE 384 (1406)
Q Consensus 316 i~~Ald~a~~~~~---~d~~L~~~i~~d~y~~~AV~e~y~s~k~il~~ll~~~~~~~ii~~i~~~i~~~i~~ 384 (1406)
+..|++.-.+++- =...|.+-|++.+|- .+..-|.-.+.++..... +..++..++.+||+.+++
T Consensus 73 l~~~l~~l~r~~flF~LP~~L~~~i~~~dy~--~~i~dY~kak~l~~~~~~---~~~vf~~v~~eve~ii~~ 139 (182)
T PF15469_consen 73 LRNALEFLQRNRFLFNLPSNLRECIKKGDYD--QAINDYKKAKSLFEKYKQ---QVPVFQKVWSEVEKIIEE 139 (182)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHcCcHH--HHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHH
Confidence 4445555555542 346677888888885 457778888887654321 556788999999988854
No 23
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=20.94 E-value=50 Score=35.15 Aligned_cols=133 Identities=18% Similarity=0.110 Sum_probs=61.7
Q ss_pred CCCcCccchhhhhcccccccccCCccchHHHHHhhhhhHHHHhhcCCCCCCceEeeccceeecccchhhhhhcccchhhH
Q 000585 771 GKPENQNHAIIFTRGEGLQTIDMNQDNYMEESLKMRNLLQEFLKKHDGVRYPTILGVREHIFTGSVSSLAWFMSNQETSF 850 (1406)
Q Consensus 771 GKpeNQNhAiIFtRGE~lQtIDmNQDnYlEEalKmRNlL~Ef~~~~~g~~~~tIlG~REhIFT~svssLa~f~a~qE~sF 850 (1406)
||+.+-|+|+=-.+||++-.+|. |..++... ++.+++-| +.. .+.++|.+-.. ...-+.+..+... +..-
T Consensus 73 ~k~~a~n~~~~~~~~d~i~~lD~--D~~~~p~~-l~~~~~~~-~~~----~~~~v~~~~~~-~~~~~~~~~~~~~-~~~~ 142 (228)
T PF13641_consen 73 GKARALNEALAAARGDYILFLDD--DTVLDPDW-LERLLAAF-ADP----GVGAVGGPVFP-DNDRNWLTRLQDL-FFAR 142 (228)
T ss_dssp HHHHHHHHHHHH---SEEEEE-S--SEEE-CHH-HHHHHHHH-HBS----S--EEEEEEEE-TTCCCEEEE-TT---S-E
T ss_pred hHHHHHHHHHHhcCCCEEEEECC--CcEECHHH-HHHHHHHH-HhC----CCCeEeeeEee-cCCCCHHHHHHHH-HHhh
Confidence 68889999999999999999884 56664433 45666677 222 35566644322 1111111211110 0000
Q ss_pred HHHHHHhhccccceeee-cCCCcccccccccccCCccccccccccchhhhccccccccCceeeeeeeEE
Q 000585 851 VTIGQRLLAHPLKVRFH-YGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEYIQ 918 (1406)
Q Consensus 851 vTl~qR~LA~Pl~vR~H-YGHPDvfd~~F~~TRGGvSKAsk~inLsEDIfaG~N~~lRgG~I~h~EYiQ 918 (1406)
....-+....++++ .+ -|+.=.|.|....-=||... ..+.||..-++.+..+|++|.++.-..
T Consensus 143 ~~~~~~~~~~~~~~-~~~~G~~~~~rr~~~~~~g~fd~----~~~~eD~~l~~r~~~~G~~~~~~~~~~ 206 (228)
T PF13641_consen 143 WHLRFRSGRRALGV-AFLSGSGMLFRRSALEEVGGFDP----FILGEDFDLCLRLRAAGWRIVYAPDAL 206 (228)
T ss_dssp ETTTS-TT-B-----S-B--TEEEEEHHHHHHH-S--S----SSSSHHHHHHHHHHHTT--EEEEEEEE
T ss_pred hhhhhhhhhcccce-eeccCcEEEEEHHHHHHhCCCCC----CCcccHHHHHHHHHHCCCcEEEECCcE
Confidence 00000111122221 11 14444555555555566555 566799999999999999999976443
Done!