Your job contains 1 sequence.
>000586
MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG
SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG
RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC
VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE
ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR
SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF
DVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDPVE
LAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDHRVWTIESSWFQDHQPSRHLFSP
PLENLKKEGDHLFRKECERITFGDAEKDPAELQEENTEMEYVPQPKYSFGLSDGSFAKCL
PIVPWKIDRHAWTIESSRFQYHQSSPHLYSSPLENLSKEGDHLFREECERITFGEFEKHT
PELKEENSKRELVSQPKYSSKLLDCPFAECLSPVLRKIDLHGWTSGNRFSLKGSYFLETC
FLADGRSSIPVEGDLLNSQRGYEYLQIEPGVSNGASGTASPLDKDEFSNEFEVSKDIKKP
LRLSCFSQGSPPLGGPLFSGGEERCESSTGCFKYKRKRKRVCYDKRMDILEADFSNQSFD
SFSRTPLQDEASCSQHLPRLSTAGDITAGFDLMSRASLNLFPSHAEPFTKETNFLSDSIE
PVGNSVSDYKALNSVWCSKISDPFPQGASWNDGHFIYNNALEGHSILGEGTSCGQLADTE
ENYKFDYDSKLRRSNQEKCTTARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREHSDVPF
DKTDWLCSVLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHSAPPFHRHKRRYISLN
CCSVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSSEEEDFRPDFKIESSTI
LDLEETHKAENFKLSLCPHAHLGAQAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNIL
DISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRL
EELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNK
NLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACR
GAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLNNSSELW
HGLHRGEISLKRASRRLLTGVRG
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000586
(1403 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1309227 - symbol:Mlh3 "mutL homolog 3 (E. coli)" spec... 408 3.5e-54 4
UNIPROTKB|E2QZJ2 - symbol:MLH3 "Uncharacterized protein" ... 395 1.8e-52 4
UNIPROTKB|E1BNK2 - symbol:MLH3 "Uncharacterized protein" ... 388 5.7e-52 4
UNIPROTKB|F1S2R6 - symbol:MLH3 "Uncharacterized protein" ... 375 1.0e-50 4
UNIPROTKB|E1C7F3 - symbol:LOC100859200 "Uncharacterized p... 411 1.1e-49 3
ZFIN|ZDB-GENE-060810-45 - symbol:mlh3 "mutL homolog 3 (E.... 402 7.7e-47 3
UNIPROTKB|Q9UHC1 - symbol:MLH3 "DNA mismatch repair prote... 380 2.3e-45 2
UNIPROTKB|G3V419 - symbol:MLH3 "DNA mismatch repair prote... 380 5.7e-42 2
DICTYBASE|DDB_G0283883 - symbol:mlh3 "MutL DNA mismatch r... 295 1.4e-39 3
UNIPROTKB|Q75F21 - symbol:AAL093C "AAL093Cp" species:2848... 268 1.5e-35 4
SGD|S000006085 - symbol:MLH3 "Protein involved in mismatc... 234 6.9e-34 3
POMBASE|SPAC19G12.02c - symbol:pms1 "MutL family mismatch... 245 8.0e-34 3
UNIPROTKB|Q8TTB5 - symbol:mutL "DNA mismatch repair prote... 304 1.1e-32 3
TIGR_CMR|BA_3904 - symbol:BA_3904 "DNA mismatch repair pr... 330 8.6e-32 4
CGD|CAL0003904 - symbol:orf19.7257 species:5476 "Candida ... 221 3.0e-30 3
UNIPROTKB|Q89DE6 - symbol:mutL "DNA mismatch repair prote... 299 8.4e-30 4
UNIPROTKB|Q69L72 - symbol:OSJNBa0016G10.12 "Os02g0592300 ... 276 1.2e-29 2
TIGR_CMR|SPO_3362 - symbol:SPO_3362 "DNA mismatch repair ... 275 3.6e-29 3
TIGR_CMR|CBU_1083 - symbol:CBU_1083 "DNA mismatch repair ... 308 7.0e-29 4
UNIPROTKB|Q74BP0 - symbol:mutL "DNA mismatch repair prote... 298 1.2e-28 3
TIGR_CMR|GSU_2001 - symbol:GSU_2001 "DNA mismatch repair ... 298 1.2e-28 3
TAIR|locus:2133274 - symbol:PMS1 "POSTMEIOTIC SEGREGATION... 257 3.6e-28 3
TIGR_CMR|CHY_1396 - symbol:CHY_1396 "DNA mismatch repair ... 260 9.5e-28 4
UNIPROTKB|A9WJ86 - symbol:mutL "DNA mismatch repair prote... 268 1.3e-27 4
DICTYBASE|DDB_G0283981 - symbol:pms1 "MutL DNA mismatch r... 242 1.3e-27 3
UNIPROTKB|Q8A120 - symbol:mutL "DNA mismatch repair prote... 322 1.9e-27 4
UNIPROTKB|Q22B61 - symbol:TTHERM_01109940 "DNA mismatch r... 232 2.2e-27 3
TIGR_CMR|DET_1195 - symbol:DET_1195 "DNA mismatch repair ... 253 1.6e-26 4
UNIPROTKB|P49850 - symbol:mutL "DNA mismatch repair prote... 281 1.7e-25 4
UNIPROTKB|Q5B515 - symbol:AN4365.2 "DNA mismatch repair p... 238 8.8e-25 2
TIGR_CMR|ECH_0884 - symbol:ECH_0884 "DNA mismatch repair ... 248 1.0e-24 3
UNIPROTKB|E2QZI8 - symbol:MLH3 "Uncharacterized protein" ... 206 1.5e-24 3
UNIPROTKB|Q8F6X4 - symbol:mutL "DNA mismatch repair prote... 253 4.4e-24 4
ZFIN|ZDB-GENE-030131-686 - symbol:pms2 "PMS2 postmeiotic ... 205 1.1e-22 4
TIGR_CMR|CPS_0323 - symbol:CPS_0323 "DNA mismatch repair ... 308 1.1e-22 3
UNIPROTKB|Q48P04 - symbol:mutL "DNA mismatch repair prote... 264 2.5e-22 4
UNIPROTKB|P23367 - symbol:mutL species:83333 "Escherichia... 294 3.2e-22 1
WB|WBGene00004064 - symbol:pms-2 species:6239 "Caenorhabd... 212 3.8e-22 3
UNIPROTKB|G5EFG5 - symbol:pms-2 "Protein PMS-2, isoform a... 212 3.8e-22 3
UNIPROTKB|P74925 - symbol:mutL "DNA mismatch repair prote... 290 6.9e-22 2
GENEDB_PFALCIPARUM|MAL7P1.145 - symbol:MAL7P1.145 "mismat... 243 7.5e-22 4
UNIPROTKB|Q8IBJ3 - symbol:MAL7P1.145 "Mismatch repair pro... 243 7.5e-22 4
TIGR_CMR|SO_0601 - symbol:SO_0601 "DNA mismatch repair pr... 292 8.3e-22 2
UNIPROTKB|F1NQJ2 - symbol:Gga.22468 "Uncharacterized prot... 190 9.0e-22 3
UNIPROTKB|Q7SAM1 - symbol:NCU08020 "Putative uncharacteri... 206 2.7e-21 3
UNIPROTKB|A6VD59 - symbol:mutL "DNA mismatch repair prote... 253 2.7e-21 4
TIGR_CMR|VC_0345 - symbol:VC_0345 "DNA mismatch repair pr... 292 4.2e-21 2
UNIPROTKB|Q7RPM0 - symbol:PY01438 "DNA mismatch repair pr... 254 4.3e-21 5
UNIPROTKB|F1NQJ3 - symbol:Gga.22468 "Uncharacterized prot... 194 8.4e-21 3
MGI|MGI:104288 - symbol:Pms2 "postmeiotic segregation inc... 195 2.1e-20 3
UNIPROTKB|D3ZZF0 - symbol:Pms2 "Protein Pms2" species:101... 194 3.4e-20 4
WB|WBGene00003373 - symbol:mlh-1 species:6239 "Caenorhabd... 276 4.7e-20 1
UNIPROTKB|Q9XU10 - symbol:mlh-1 "Protein MLH-1" species:6... 276 4.7e-20 1
TIGR_CMR|NSE_0609 - symbol:NSE_0609 "DNA mismatch repair ... 225 5.9e-20 5
UNIPROTKB|F1RFM9 - symbol:PMS2 "Uncharacterized protein" ... 191 1.4e-19 4
TIGR_CMR|APH_0939 - symbol:APH_0939 "DNA mismatch repair ... 194 1.6e-19 2
ASPGD|ASPL0000093218 - symbol:AN11853 species:162425 "Eme... 192 2.9e-19 3
ASPGD|ASPL0000095187 - symbol:AN11854 species:162425 "Eme... 192 2.9e-19 3
UNIPROTKB|Q5AZG4 - symbol:AN6316.2 "ATP-binding protein (... 192 2.9e-19 3
UNIPROTKB|Q755U7 - symbol:AER421W "AER421Wp" species:2848... 207 3.2e-19 3
UNIPROTKB|F1PNW0 - symbol:PMS2 "Uncharacterized protein" ... 193 3.9e-19 4
UNIPROTKB|F1PNU2 - symbol:PMS2 "Uncharacterized protein" ... 193 4.7e-19 4
UNIPROTKB|P54278 - symbol:PMS2 "Mismatch repair endonucle... 178 1.1e-18 3
UNIPROTKB|O67518 - symbol:mutL "DNA mismatch repair prote... 228 1.3e-18 3
UNIPROTKB|Q7NL47 - symbol:mutL "DNA mismatch repair prote... 208 3.1e-18 3
UNIPROTKB|Q755L3 - symbol:AFL199C "AFL199Cp" species:2848... 263 4.7e-18 2
SGD|S000005026 - symbol:PMS1 "ATP-binding protein involve... 198 9.1e-18 2
UNIPROTKB|G3V3E0 - symbol:MLH3 "DNA mismatch repair prote... 224 4.3e-17 1
UNIPROTKB|Q3KLC2 - symbol:mutL "DNA mismatch repair prote... 250 4.6e-17 2
UNIPROTKB|A8HM54 - symbol:MLH1 "Mismatch repair protein" ... 254 1.0e-16 2
FB|FBgn0011660 - symbol:Pms2 "Pms2" species:7227 "Drosoph... 178 1.2e-16 3
CGD|CAL0005779 - symbol:MLH1 species:5476 "Candida albica... 255 2.3e-16 2
UNIPROTKB|E2RBM6 - symbol:MLH1 "Uncharacterized protein" ... 251 2.9e-16 2
UNIPROTKB|E1BQE0 - symbol:MLH1 "Uncharacterized protein" ... 252 3.6e-16 2
ZFIN|ZDB-GENE-040426-1600 - symbol:mlh1 "mutL homolog 1, ... 248 5.2e-16 2
UNIPROTKB|F1MPG0 - symbol:MLH1 "Uncharacterized protein" ... 247 7.8e-16 2
UNIPROTKB|Q5JN46 - symbol:P0401G10.10 "Os01g0958900 prote... 243 1.1e-15 2
MGI|MGI:101938 - symbol:Mlh1 "mutL homolog 1 (E. coli)" s... 248 1.8e-15 3
RGD|620937 - symbol:Mlh1 "mutL homolog 1, colon cancer, n... 238 3.2e-15 3
UNIPROTKB|P97679 - symbol:Mlh1 "DNA mismatch repair prote... 238 3.2e-15 3
FB|FBgn0011659 - symbol:Mlh1 "Mlh1" species:7227 "Drosoph... 252 3.2e-15 3
UNIPROTKB|P54277 - symbol:PMS1 "PMS1 protein homolog 1" s... 227 4.6e-15 3
UNIPROTKB|P40692 - symbol:MLH1 "DNA mismatch repair prote... 247 5.7e-15 3
UNIPROTKB|Q9Y6S7 - symbol:unknown "Putative uncharacteriz... 221 8.2e-15 1
UNIPROTKB|Q3BDU3 - symbol:PMS1 "Rhabdomyosarcoma antigen ... 192 9.4e-15 3
UNIPROTKB|H0Y818 - symbol:MLH1 "DNA mismatch repair prote... 237 3.8e-14 3
TAIR|locus:2122388 - symbol:MLH1 "AT4G09140" species:3702... 227 7.9e-14 2
UNIPROTKB|C9JF76 - symbol:PMS1 "PMS1 protein homolog 1" s... 192 1.1e-13 1
UNIPROTKB|Q753U9 - symbol:AFR226C "AFR226Cp" species:2848... 225 1.1e-13 2
ZFIN|ZDB-GENE-030616-528 - symbol:pms1 "PMS1 postmeiotic ... 218 1.1e-13 1
UNIPROTKB|F1SN54 - symbol:PMS1 "Uncharacterized protein" ... 227 1.2e-13 3
UNIPROTKB|I3L0B5 - symbol:PMS2 "Mismatch repair endonucle... 150 1.9e-13 3
UNIPROTKB|Q7SCN8 - symbol:NCU09373 "Predicted protein" sp... 214 2.4e-13 1
UNIPROTKB|E2RAQ2 - symbol:PMS1 "Uncharacterized protein" ... 223 4.1e-13 3
ASPGD|ASPL0000042310 - symbol:AN1564 species:162425 "Emer... 202 4.1e-13 2
UNIPROTKB|Q5BD16 - symbol:AN1564.2 "DNA mismatch repair p... 202 4.1e-13 2
GENEDB_PFALCIPARUM|PF11_0184 - symbol:PF11_0184 "DNA mism... 218 4.6e-13 2
UNIPROTKB|Q8IIJ0 - symbol:PF11_0184 "DNA mismatch repair ... 218 4.6e-13 2
UNIPROTKB|G4MRP9 - symbol:MGG_04627 "Uncharacterized prot... 188 6.9e-13 2
UNIPROTKB|D4A651 - symbol:D4A651 "Uncharacterized protein... 222 9.7e-13 3
WARNING: Descriptions of 32 database sequences were not reported due to the
limiting value of parameter V = 100.
>RGD|1309227 [details] [associations]
symbol:Mlh3 "mutL homolog 3 (E. coli)" species:10116 "Rattus
norvegicus" [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0000795 "synaptonemal complex" evidence=ISO;IBA] [GO:0001673
"male germ cell nucleus" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005712 "chiasma"
evidence=ISO;IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=ISO;IBA] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007130
"synaptonemal complex assembly" evidence=IEA;ISO] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0007140 "male
meiosis" evidence=IEA;ISO] [GO:0007144 "female meiosis I"
evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0019237
"centromeric DNA binding" evidence=IEA;ISO] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032300 "mismatch repair complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 RGD:1309227
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0016887
GO:GO:0006298 GO:GO:0019237 GO:GO:0001673 GO:GO:0003697
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0007130
EMBL:CH473982 GO:GO:0007144 GO:GO:0000795 GO:GO:0005712
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073 CTD:27030
KO:K08739 GeneTree:ENSGT00550000074903 IPI:IPI00877366
RefSeq:NP_001101513.1 UniGene:Rn.119254 Ensembl:ENSRNOT00000033493
GeneID:314320 KEGG:rno:314320 UCSC:RGD:1309227 OrthoDB:EOG4K9BB9
NextBio:667464 Uniprot:D4ADG4
Length = 1442
Score = 408 (148.7 bits), Expect = 3.5e-54, Sum P(4) = 3.5e-54
Identities = 117/354 (33%), Positives = 185/354 (52%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG L L + VEEL NS+DA AT V + V + V+V+D+G G+
Sbjct: 2 IRCLSDEVQAKLRSGLALSSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
+ D + +G R+ TSK + D+++ T +GFRGEALASI+D+ S +EI +K
Sbjct: 62 AGDDVEKVGNRYF-TSKCHSVRDLENPT---FYGFRGEALASIADMASAVEISSKKSTTL 117
Query: 123 NGYRKVMKGSKCLYLGIDD-ERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 118 KTFVKMFQNGKALAAREADLTRPSVGTTVTVYNLFYQFPVRRKSMD--PRLEFEKVRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L +G+ L E++ E
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMILQLPKTKDICSRFCQIYGLGKSQKLREIHYKYKEFEF 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAA--SFDC-----SDSWKANNG 294
+GYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 236 NGYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS S+ Y++N++CP YD+ +P KT + F++W+ VL ++ I+
Sbjct: 294 --PRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQNWDTVLICVQEGIK 345
Score = 295 (108.9 bits), Expect = 6.6e-42, Sum P(4) = 6.6e-42
Identities = 100/344 (29%), Positives = 163/344 (47%)
Query: 78 TSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPNGYRKVMKGSKCLY 136
TSK + D+++ T +GFRGEALASI+D+ S +EI +K + K+ + K L
Sbjct: 75 TSKCHSVRDLENPT---FYGFRGEALASIADMASAVEISSKKSTTLKTFVKMFQNGKALA 131
Query: 137 LGIDD-ERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKVSFKF 195
D R VGTTV +LFY PVRRK M P+ V++ V ++L+HP +SF
Sbjct: 132 AREADLTRPSVGTTVTVYNLFYQFPVRRKSMD--PRLEFEKVRQRVEALSLMHPSISFSL 189
Query: 196 IDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEISGYISSPYDSISVK 255
+ S +L +G+ L E++ E +GYISS ++ K
Sbjct: 190 RNDVSGSMILQLPKTKDICSRFCQIYGLGKSQKLREIHYKYKEFEFNGYISS--EAHYNK 247
Query: 256 AFQYVYINSRYVCKGPIHKLLNHLAA--SFDC---SDSWKANNGFLKGKRSKSQACPAYL 310
Q++++N R V + +HKL++ L S C + S RS S+ Y+
Sbjct: 248 NMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSSPRHRSASELHGIYV 307
Query: 311 LNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVDML-EDAE 369
+N++CP YD+ +P KT + F++W+ VL ++ I+ K + + V++ ED +
Sbjct: 308 INVQCPFCEYDVCIEPAKTLIEFQNWDTVLICVQEGIK----KFLKQEKLFVELSSEDIK 363
Query: 370 LPLESSRFXXXXXXXXXXXXPLKNLAKQRDHMFHKECERITFQE 413
E + F L Q H ++C++ +FQE
Sbjct: 364 EFNEDNGFSLIGTT----------LQTQSTH---EKCDQSSFQE 394
Score = 198 (74.8 bits), Expect = 3.5e-54, Sum P(4) = 3.5e-54
Identities = 67/225 (29%), Positives = 105/225 (46%)
Query: 1182 AGGTLAV-IDQHAADERIRLEELRHKVLSGEG-KSVAYLDAEQELVLPEIGY-------Q 1232
AGG L V +DQHAA ER+RLE+L + +S ++P + +
Sbjct: 1202 AGGNLLVLVDQHAAHERVRLEQLITDSYEKQAPQSAGRKKLLSSTIIPPLAITVSEEQRR 1261
Query: 1233 LLQNFAEQIKDWGWICNIHTQGSRSF---NKNLNLLQRQITVITLLAVPCIFGVNLSDVD 1289
LL+++ + ++D G S L ++R+ + P + + ++
Sbjct: 1262 LLRSYHKHLEDLGLELLFPDASDSSILVGKVPLCFVEREANELRRGRSPVTKSI-VEEL- 1319
Query: 1290 LLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1348
+ E L+ L T G T P +V +VL S+AC GAI F D L E ++E L L F
Sbjct: 1320 IREQLELLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDRLSLEESCRLIEALSLCQLPF 1379
Query: 1349 QCAHGRPTTVPLVNLEALH--KQI----AQLNNSSELWHGLHRGE 1387
QCAHGRP+ +PL +L+ L KQ+ +L + WH + E
Sbjct: 1380 QCAHGRPSMLPLADLDHLEQEKQVKPNLTKLRKMAHAWHLFGKAE 1424
Score = 103 (41.3 bits), Expect = 3.5e-54, Sum P(4) = 3.5e-54
Identities = 32/79 (40%), Positives = 40/79 (50%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1146 VDVSSGQAGSLAVKIHNVLYPYRFTKEMIHSVQVLQQVDNKFIACLMSSRTDGSGQAGGN 1205
Query: 1186 LAV-IDQHAADERIRLEEL 1203
L V +DQHAA ER+RLE+L
Sbjct: 1206 LLVLVDQHAAHERVRLEQL 1224
Score = 51 (23.0 bits), Expect = 3.5e-54, Sum P(4) = 3.5e-54
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 562 HQSSPHLYSSPLENLSKEGDHLFREECERITFGEFEKHTPELKEEN--SKRELVSQPKYS 619
H++SP ++SSP++ H EE E E + T + N E+ SQ +
Sbjct: 501 HETSPKMFSSPIQT------HHPLEESEADLEIEMKSSTVNVMAANIPPNSEIQSQLE-- 552
Query: 620 SKLLDCPFAEC 630
+L D P EC
Sbjct: 553 -QLEDAPEVEC 562
Score = 49 (22.3 bits), Expect = 5.9e-16, Sum P(3) = 5.9e-16
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 604 KEENSKRELVSQPKY--SSKL-------LDCPFAE---CLSPVLRKIDLHGW 643
K ++ R++ S P++ +S+L + CPF E C+ P I+ W
Sbjct: 282 KNGSASRQMNSSPRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQNW 333
Score = 47 (21.6 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 52 CYVKVVDDGSGISRDGLVLLGERHAATSKL 81
C + DGSG + L++L ++HAA ++
Sbjct: 1190 CLMSSRTDGSGQAGGNLLVLVDQHAAHERV 1219
>UNIPROTKB|E2QZJ2 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019237 "centromeric DNA binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0007144 "female meiosis I" evidence=IEA] [GO:0007140 "male
meiosis" evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0008104 GO:GO:0003682 GO:GO:0006298 GO:GO:0019237
GO:GO:0001673 GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073
OMA:HGAIKFN GeneTree:ENSGT00550000074903 EMBL:AAEX03005855
Ensembl:ENSCAFT00000026947 Uniprot:E2QZJ2
Length = 1424
Score = 395 (144.1 bits), Expect = 1.8e-52, Sum P(4) = 1.8e-52
Identities = 114/360 (31%), Positives = 184/360 (51%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEELV NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IECLSVEVQARLRSGLAICSLGQCVEELVLNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDIDKVGNRYF-TSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L + R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQNGKALKACEANLTRPSAGTTVTVYNLFYQLPVRRKCMD--PRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L +G+ L E+ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQVPKTKDVCSRFCQIYGLGKSQKLREIKFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAA--SFDC-----SDSWKANNG 294
SGYISS ++ K Q++++N R V + +HK ++ L S C S S + N+
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKFIDFLLRRESIICKPKNGSSSRQVNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
R+ + Y++N++C YD+ +P KT + F+DW+ VL I+ A++ ++KK
Sbjct: 294 --PRHRANPELHGIYVINMQCQFCEYDVCMEPAKTLIEFQDWDTVLVCIQEAVKM-FLKK 350
Score = 206 (77.6 bits), Expect = 1.8e-52, Sum P(4) = 1.8e-52
Identities = 71/225 (31%), Positives = 111/225 (49%)
Query: 1182 AGGTLAV-IDQHAADERIRLEEL-----RHKVLSGEGKSV---AYLDAEQELVLPEIGYQ 1232
AGG L V +DQHAA ER+RLE+L + G G+ + + ++ + E +
Sbjct: 1184 AGGNLLVLVDQHAAHERVRLEQLITDSYEKQQPQGSGRKKLLSSTVSPPLKIRVTEEQRR 1243
Query: 1233 LLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSDVD 1289
LL+ + + ++D G I T S + L ++R+ + P N+ +
Sbjct: 1244 LLRCYHKNLEDLGLEILFPDTNDSLVLVGKVPLCFIEREANELRRGRSPVTR--NIVEEF 1301
Query: 1290 LLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1348
+ E ++ L T G T P +V +VL S+AC GAI F D L E ++E L L F
Sbjct: 1302 IREQVELLQTTGGIQRTLPLTVQKVLASQACHGAIKFNDGLSREESCRLIEALSWCQLPF 1361
Query: 1349 QCAHGRPTTVPLVNLEAL--HKQI----AQLNNSSELWHGLHRGE 1387
QCAHGRP+ +PL +++ L KQI A+L ++ WH + E
Sbjct: 1362 QCAHGRPSMLPLADIDHLGQEKQIKPNLAKLRKMAQAWHLFGKAE 1406
Score = 104 (41.7 bits), Expect = 1.8e-52, Sum P(4) = 1.8e-52
Identities = 32/79 (40%), Positives = 41/79 (51%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L+ P K + +VLQQVD KFI + AGG
Sbjct: 1128 VDVSSGQAKSLVVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1187
Query: 1186 LAV-IDQHAADERIRLEEL 1203
L V +DQHAA ER+RLE+L
Sbjct: 1188 LLVLVDQHAAHERVRLEQL 1206
Score = 40 (19.1 bits), Expect = 2.0e-29, Sum P(3) = 2.0e-29
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 1301 DGSSTTPPSVLRVLNSKACRGAIMFG 1326
D +ST ++ N K CR I +G
Sbjct: 661 DRTSTLNKKFAQLSNKKLCRTNIRYG 686
Score = 39 (18.8 bits), Expect = 1.8e-52, Sum P(4) = 1.8e-52
Identities = 22/81 (27%), Positives = 31/81 (38%)
Query: 553 TIESSRFQYHQSSP-H--LYSSPLENLSK---EGDHLFREECERITFGEFEKHTPELKEE 606
T +S + Y P H + S L+ E L ++ E GE EKH E
Sbjct: 439 TNDSFLYNYESVDPSHSKVMESSLQTKDSSCSESGILEQQTAEVSESGENEKHKKLCLEL 498
Query: 607 NSKRELVSQPKYSSKLLDCPF 627
NS L + S++ PF
Sbjct: 499 NSSENL---SRIHSEMFASPF 516
Score = 38 (18.4 bits), Expect = 8.5e-16, Sum P(3) = 8.5e-16
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 604 KEENSKRELVSQPKYSS--KL-------LDCPFAE---CLSPVLRKIDLHGW 643
K +S R++ S P++ + +L + C F E C+ P I+ W
Sbjct: 282 KNGSSSRQVNSSPRHRANPELHGIYVINMQCQFCEYDVCMEPAKTLIEFQDW 333
>UNIPROTKB|E1BNK2 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0008104
GO:GO:0003682 GO:GO:0006298 GO:GO:0019237 GO:GO:0001673
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144 GO:GO:0000795
GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073 OMA:HGAIKFN
GeneTree:ENSGT00550000074903 EMBL:DAAA02029619 IPI:IPI00924115
Ensembl:ENSBTAT00000061421 ArrayExpress:E1BNK2 Uniprot:E1BNK2
Length = 1452
Score = 388 (141.6 bits), Expect = 5.7e-52, Sum P(4) = 5.7e-52
Identities = 117/384 (30%), Positives = 195/384 (50%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSAEVQARLRSGLAVCSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRYF-TSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSKKNKSM 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQLPVRRKCMD--PRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L +G+ L E+N E+
Sbjct: 176 EALSLMHPTISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREINFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAA--SFDCSD-SWKANNGFLKG 298
+G+ISS ++ K Q++++N R V + +HKL++ L S C S A+
Sbjct: 236 TGFISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQVNSN 293
Query: 299 KRSKS--QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK-- 354
R +S + Y++N++C YD+ +P KT + F++W+ +L I+ +++ ++KK
Sbjct: 294 PRPRSNPELHGIYVINVQCQFCEYDVCLEPAKTLIEFQNWDTLLICIQEGVKT-FLKKEK 352
Query: 355 --IAHDSFDV-DMLEDAELPLESS 375
+ S D+ + ED + L S+
Sbjct: 353 LFVELSSEDIKEFSEDNDFSLFSA 376
Score = 207 (77.9 bits), Expect = 5.7e-52, Sum P(4) = 5.7e-52
Identities = 69/219 (31%), Positives = 108/219 (49%)
Query: 1182 AGGTLAV-IDQHAADERIRLEEL-----RHKVLSGEGKSV---AYLDAEQELVLPEIGYQ 1232
AGG L V +DQHAA ERIRLE+L + G G+ + + E+ + E +
Sbjct: 1214 AGGNLLVLVDQHAAHERIRLEQLIIDSYEKQQPQGFGRKKLLSSIVSPPLEITVTEEQRR 1273
Query: 1233 LLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSDV- 1288
LL+ + + ++D G I T S + L ++R+ + + G+ +
Sbjct: 1274 LLRCYHKNLEDLGLEIVFPDTSDSLVLIGKVPLCFVEREASELRRGRSTVTKGIVEEFIR 1333
Query: 1289 DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1348
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E L L F
Sbjct: 1334 EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSFEESCRLIEALSWCQLPF 1391
Query: 1349 QCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWH 1381
QCAHGRP+ +PL N++ L ++ +A+L ++ WH
Sbjct: 1392 QCAHGRPSMLPLANIDHLEQEKQTKPNLAKLRRMAQAWH 1430
Score = 104 (41.7 bits), Expect = 5.7e-52, Sum P(4) = 5.7e-52
Identities = 33/79 (41%), Positives = 40/79 (50%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 1186 LAV-IDQHAADERIRLEEL 1203
L V +DQHAA ERIRLE+L
Sbjct: 1218 LLVLVDQHAAHERIRLEQL 1236
Score = 50 (22.7 bits), Expect = 6.7e-31, Sum P(2) = 6.7e-31
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 470 DHQPSRHLFSPPLENLKKEGD--HLFRKECERITFG-DAEKDPAEL 512
DH P L L++ HLF KEC+ + G A P EL
Sbjct: 1407 DHLEQEKQTKPNLAKLRRMAQAWHLFGKECD-VGQGLQASMPPCEL 1451
Score = 41 (19.5 bits), Expect = 5.7e-52, Sum P(4) = 5.7e-52
Identities = 20/81 (24%), Positives = 31/81 (38%)
Query: 553 TIESSRFQYHQSSP-H--LYSSPLEN---LSKEGDHLFREECERITFGEFEKHTPELKEE 606
T +S + Y P H + S L+N + +L +E GE +KH E
Sbjct: 438 TNDSFLYTYKSDGPAHCKMAESSLQNEDSACSQSRNLEQETAGASELGENKKHKKSCLEH 497
Query: 607 NSKRELVSQPKYSSKLLDCPF 627
NS +S++ PF
Sbjct: 498 NSSENPCGT---TSEMFGSPF 515
Score = 40 (19.1 bits), Expect = 7.2e-52, Sum P(4) = 7.2e-52
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 553 TIESSR-FQYHQSSPHLYSSPLENLSKEGDHLFREECERITFGEFEKHTPE 602
T++S + F+ +P S P+ + +G+ LF ++ E + + PE
Sbjct: 919 TLDSCKLFKNEHKNPESDSIPMSDSVTQGN-LFSKDSETYSNNNTTEKIPE 968
Score = 39 (18.8 bits), Expect = 5.7e-16, Sum P(3) = 5.7e-16
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 625 CPFAECLSPVLRKIDLHGW 643
C + CL P I+ W
Sbjct: 315 CEYDVCLEPAKTLIEFQNW 333
Score = 38 (18.4 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 393 NLAKQRD-----HMFHKECE 407
NLAK R H+F KEC+
Sbjct: 1418 NLAKLRRMAQAWHLFGKECD 1437
>UNIPROTKB|F1S2R6 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0006298
GO:GO:0019237 GO:GO:0001673 GO:GO:0007140 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073
OMA:HGAIKFN GeneTree:ENSGT00550000074903 EMBL:CT737372
Ensembl:ENSSSCT00000002644 Uniprot:F1S2R6
Length = 1427
Score = 375 (137.1 bits), Expect = 1.0e-50, Sum P(4) = 1.0e-50
Identities = 108/358 (30%), Positives = 183/358 (51%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQARLRSGLAICSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGIGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
+ + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI ++ +
Sbjct: 62 GSEDVDKVGNRYF-TSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSRRNKSM 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ V
Sbjct: 118 KTFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQLPVRRKCMD--PRLEFEKVRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEI 241
++L+HP VSF + S +L +G+ L E+N E+
Sbjct: 176 EALSLMHPSVSFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREINFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAA--SFDCSD-SWKANNGFLKG 298
+G+IS+ ++ K Q++++N R + + +HKL++ L S C + A+ G
Sbjct: 236 NGFISA--EAHYNKNMQFLFVNKRLILRTKLHKLIDFLLRKESIICKPKNGSASRQMNCG 293
Query: 299 KRSKS--QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
R + + Y++N++C YD+ +P KT + F++W+ +L I+ ++ ++KK
Sbjct: 294 PRPRPNPELHGIYVINMQCQFCEYDVCLEPAKTLIEFQNWDTLLVCIQEGVKM-FLKK 350
Score = 206 (77.6 bits), Expect = 1.0e-50, Sum P(4) = 1.0e-50
Identities = 74/233 (31%), Positives = 112/233 (48%)
Query: 1182 AGGTLAV-IDQHAADERIRLEEL------RHKVLSGEGKSV---AYLDAEQELVLPEIGY 1231
AGG L V +DQHAA ERIRLE+L + G G+ + ++ E+ + E
Sbjct: 1186 AGGNLLVLVDQHAAHERIRLEQLIAVDSYEKQQAQGSGRKKLLSSTVNPPLEIPVTEEQR 1245
Query: 1232 QLLQNFAEQIKDWGWICNIHTQGSRSF---NKNLNLLQRQITVITLLAVPCIFGVNLSDV 1288
+LL+ + + ++D G R L ++R+ L ++ +
Sbjct: 1246 RLLRCYHKNLEDLGLEIIFPDTSDRLVLVGKVPLCFVEREAN--ELRRGRSTVTKSIVEE 1303
Query: 1289 DLLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1347
+ E ++ L T G T P +V +VL S+AC GAI F DSL E ++E L L
Sbjct: 1304 FIREQVELLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDSLSLEESCRLIEALSWCQLP 1363
Query: 1348 FQCAHGRPTTVPLVNLEALH--KQI----AQLNNSSELWHGLHRGEISLKRAS 1394
FQCAHGRP+ +PL +++ L KQI A+L ++ WH + E S R S
Sbjct: 1364 FQCAHGRPSMLPLADVDHLEQEKQIKPNLAKLRRMTQAWHLFGKAEGSDTRQS 1416
Score = 104 (41.7 bits), Expect = 1.0e-50, Sum P(4) = 1.0e-50
Identities = 33/79 (41%), Positives = 40/79 (50%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1130 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEEDGEAGGN 1189
Query: 1186 LAV-IDQHAADERIRLEEL 1203
L V +DQHAA ERIRLE+L
Sbjct: 1190 LLVLVDQHAAHERIRLEQL 1208
Score = 43 (20.2 bits), Expect = 1.0e-50, Sum P(4) = 1.0e-50
Identities = 26/89 (29%), Positives = 37/89 (41%)
Query: 541 PIVPWKIDRHA-----WTIESSRFQYHQSS--P--HLYSSPLENLSKEGDHLFRE-ECER 590
P +PWK + H I + + +SS P H++ S SKE D L ++ C R
Sbjct: 791 PDIPWKDENHLDNSGICKITTLKHNDSRSSCQPASHMFYSEKFPFSKEEDCLEQQMPCLR 850
Query: 591 ---ITFGEFEKHTPE-LKEENSKRELVSQ 615
IT E + L E S L S+
Sbjct: 851 ESPITLNELSHFNRKPLDGEKSPESLASK 879
Score = 40 (19.1 bits), Expect = 5.3e-16, Sum P(3) = 5.3e-16
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 623 LDCPFAE---CLSPVLRKIDLHGW 643
+ C F E CL P I+ W
Sbjct: 310 MQCQFCEYDVCLEPAKTLIEFQNW 333
Score = 37 (18.1 bits), Expect = 3.6e-28, Sum P(2) = 3.6e-28
Identities = 29/132 (21%), Positives = 56/132 (42%)
Query: 1128 NISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLA 1187
N+ C D L+ + L+ EF D++ E K+ + +K F+ + +
Sbjct: 309 NMQCQFCEYDVCLEPAKTLI----EFQNWDTLLVCIQEGVKMFLKKEKLFVEL----SNE 360
Query: 1188 VIDQHAADERIRL--EELRHKVLSGEG-KSVAYLDAEQELVLPEIGYQLLQNFAEQIKDW 1244
I + + D L L+ +V S E V + +A ++ Y++ ++ +K
Sbjct: 361 DIKEFSEDNDFSLFSTTLQKQVSSDEKYDQVNFQEACNNIL---DSYEMFNLQSKAVKRK 417
Query: 1245 GWICNIHTQGSR 1256
+ NI+TQ SR
Sbjct: 418 ATVENINTQNSR 429
>UNIPROTKB|E1C7F3 [details] [associations]
symbol:LOC100859200 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0000795 "synaptonemal
complex" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0008104
GO:GO:0003682 GO:GO:0006298 GO:GO:0019237 GO:GO:0001673
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144 GO:GO:0000795
GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073 OMA:HGAIKFN
GeneTree:ENSGT00550000074903 EMBL:AADN02003465 IPI:IPI00593431
ProteinModelPortal:E1C7F3 Ensembl:ENSGALT00000016763 Uniprot:E1C7F3
Length = 1424
Score = 411 (149.7 bits), Expect = 1.1e-49, Sum P(3) = 1.1e-49
Identities = 118/353 (33%), Positives = 185/353 (52%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L E V+ +RSG + L + VEELV NS+DA AT V V V + ++VVD+GSG+
Sbjct: 2 IKHLAEDVQARLRSGVTVTSLGQCVEELVLNSIDAKATCVAVRVDLEAFKIQVVDNGSGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
++ L +G+R+ TSK +AD++ T +GFRGEALASI+++ S++E+ +K+
Sbjct: 62 GKEDLSKMGKRYF-TSKCSSVADLEKLT---FYGFRGEALASIANMASVVEVSSKSSKTA 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ L + + R GTTV +LFY PVRR+ M P V++ V
Sbjct: 118 KTFVKLFHNGHALEVCEAELSRPSGGTTVTVCNLFYQLPVRRRCMD--PVLEFERVRQKV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEI 241
I+L+HP VS + S +L +G+ L E+ G EI
Sbjct: 176 EAISLMHPSVSLSLRNDISCSMVLQLPKTRDVYSRFCQIYGLGRSQKLREIKHKSGGFEI 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
SGYISS + K Q++Y+N R V K +HKL++ L K+ +G S
Sbjct: 236 SGYISS--EGHYNKNMQFLYVNRRLVLKTRLHKLIDFLLRKESVICKAKSVPASKQGSSS 293
Query: 302 KSQA-C-PA----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+ C P ++LN+ C +S YD++ +P KT + F++W+ +LA +E ++
Sbjct: 294 PGRLRCGPELYGIFVLNVTCAYSDYDVSLEPTKTLIEFQNWDVLLACVEEGVK 346
Score = 217 (81.4 bits), Expect = 1.1e-49, Sum P(3) = 1.1e-49
Identities = 73/263 (27%), Positives = 125/263 (47%)
Query: 1128 NISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLA 1187
N++ IHN + ++H D+ +C+ + + ++DKK G L
Sbjct: 1141 NLAVKIHNVLYPYRFTKDMIHSMQVLQQVDNKFIACVINTR--NEMDKK----EGGNLLV 1194
Query: 1188 VIDQHAADERIRLEEL------RHKVLSGEGKSVAY-LDAEQELVLPEIGYQLLQNFAEQ 1240
++DQHAA ERIRLE+L + G+ K ++ + E+ + E ++L +
Sbjct: 1195 LVDQHAAHERIRLEQLIADSYDKEATACGKKKLLSSSVSPPLEIEVTEEQRRILWCCYKN 1254
Query: 1241 IKDWGWICNI-HTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSDV-DLLEFLQQ 1296
+KD G + T S K + L ++R+ + P + + + +E +Q
Sbjct: 1255 LKDLGLELSFPETNSSMILVKKVPLCFIEREANELRRKRQPVTKSIVEELIQEQVELVQT 1314
Query: 1297 LADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
+ G T P + L+VL S+AC GAI F DSL E ++E L L FQCAHGRP+
Sbjct: 1315 MRGAQG--TLPLTFLKVLASQACHGAIKFNDSLTSEESCRLMEALSSCQLPFQCAHGRPS 1372
Query: 1357 TVPLVNLEALHKQIAQLNNSSEL 1379
+PL +++ L +++ N + L
Sbjct: 1373 MMPLADIDHLQEEMQPKPNLARL 1395
Score = 41 (19.5 bits), Expect = 4.8e-49, Sum P(4) = 4.8e-49
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 510 AELQEENTEMEYVPQPKYSFGLSDGS 535
A+ N EY+P G +DGS
Sbjct: 670 AKYISNNMNKEYIPLCSREVGTTDGS 695
Score = 41 (19.5 bits), Expect = 4.8e-49, Sum P(4) = 4.8e-49
Identities = 16/74 (21%), Positives = 34/74 (45%)
Query: 548 DRHAWTIESSRFQYHQSSPHLYSSPLENLSKEGDHLFREECERITFGEFEKHTPELKEEN 607
D H++ +ESS + + Y S +E + R+ C ++ G+ + +L+ E+
Sbjct: 912 DNHSYGLESSNNDFLYNPCQRYKSSVEEM--------RDGCS-VSKGDACPQSVDLRAES 962
Query: 608 SKRELVSQPKYSSK 621
K + P S++
Sbjct: 963 MKCTVSLSPLSSTE 976
Score = 41 (19.5 bits), Expect = 9.5e-11, Sum P(3) = 9.5e-11
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 574 ENLSKEGDHLFREECERITFGEFEKHT 600
E+LSK G F +C + + EK T
Sbjct: 64 EDLSKMGKRYFTSKCSSVA--DLEKLT 88
Score = 40 (19.1 bits), Expect = 1.1e-49, Sum P(3) = 1.1e-49
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 876 IYNNALEG-HSILGEGTSCGQLADTEENYKFDYDSKLRRSNQEKCTTARSGLRFEYYDNS 934
++++ EG S + + SC L EN D ++ + Q+ T S F + +
Sbjct: 504 LHSSFTEGARSEIIKTDSCADLRRCAENCAKDVGNQQDKDVQKSNTVCISNNGFTQWPSE 563
Query: 935 SED 937
ED
Sbjct: 564 RED 566
>ZFIN|ZDB-GENE-060810-45 [details] [associations]
symbol:mlh3 "mutL homolog 3 (E. coli)" species:7955
"Danio rerio" [GO:0030983 "mismatched DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 ZFIN:ZDB-GENE-060810-45 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR10073 GeneTree:ENSGT00550000074903 EMBL:BX957326
IPI:IPI00488975 Ensembl:ENSDART00000143694 Bgee:E9QGN2
Uniprot:E9QGN2
Length = 1171
Score = 402 (146.6 bits), Expect = 7.7e-47, Sum P(3) = 7.7e-47
Identities = 113/360 (31%), Positives = 181/360 (50%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LP V+ +RSG +F L + VEEL+ NS+DAGAT V V + + C ++V+D+GSG+
Sbjct: 2 IKSLPINVQAQLRSGVAIFSLQQCVEELILNSIDAGATCVAVKIDIEACKLQVIDNGSGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRP 122
+ + +G R+ TSK L D+D+ + +GFRGEA++SI ++ ++EI ++
Sbjct: 62 CLEDMEKVGLRYN-TSKCSSLEDLDN---LHFYGFRGEAISSIVSLAEMVEISSRTKQSV 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
Y K + L + R GTTV +LF+N PVRRK M P +++ V
Sbjct: 118 KTYVKSFNETNALEVFEAQTVRPSAGTTVSVYNLFHNMPVRRKRMD--PVLETERIRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEI 241
I+L+HP VSF S ++ G+ L EVN +I
Sbjct: 176 EAISLMHPSVSFTVKKENSAHMMVQLSKTSSTYYRFVQIHGLNRAQKLGEVNYEHEQFQI 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG-----FL 296
+G+I + + Q++++N R + K IHK LN L S + + NN
Sbjct: 236 TGHIGR--EGHYNNSLQFLFVNERLLLKTRIHKTLNCLLKRV--SGAARQNNSPTSYPVT 291
Query: 297 KGKRSKS--QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
+ K Y++N++C +S YD+ +P K+ + FKDW+ VL IE ++ A++ K
Sbjct: 292 SSPKQKGGYDLHGIYVINIKCHYSEYDICLEPAKSLIEFKDWDNVLICIEEGVK-AFLTK 350
Score = 153 (58.9 bits), Expect = 7.7e-47, Sum P(3) = 7.7e-47
Identities = 36/81 (44%), Positives = 44/81 (54%)
Query: 1290 LLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1348
L E ++ L T P +V VL S+AC GAI F D L EC +V L L F
Sbjct: 1059 LREHIELLRSTGRVRGILPLTVHNVLASQACHGAIKFNDVLNKEECCSLVSSLSSCRLPF 1118
Query: 1349 QCAHGRPTTVPLVNLEALHKQ 1369
QCAHGRP+ VPL +L L +Q
Sbjct: 1119 QCAHGRPSIVPLADLHHLEEQ 1139
Score = 82 (33.9 bits), Expect = 7.7e-47, Sum P(3) = 7.7e-47
Identities = 24/75 (32%), Positives = 34/75 (45%)
Query: 1143 SSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVA--------------GGTLAV 1188
+ GL P K+ + +V+ QVDKKF+ + G L +
Sbjct: 890 AEGLAVKIHNILFPYRFTKNMIHTMRVINQVDKKFLACLINTAGQNTSESSTDEGNLLVL 949
Query: 1189 IDQHAADERIRLEEL 1203
+DQHAA ER+RLE L
Sbjct: 950 VDQHAAHERVRLEGL 964
Score = 42 (19.8 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 1240 QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC 1279
+ KDW + +G ++F NL+ ++ I+ +PC
Sbjct: 329 EFKDWDNVLICIEEGVKAFLTKENLVS-ELNTISNDGLPC 367
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 123 NGYRKVMKGSKCLYLGIDDER-KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
N K+ +KC YL D E +D + + RDL P + + K +L
Sbjct: 607 NKKNKISLAAKCSYLKQDKELCRD--SNFLKRDLSSFPPSQDSCFKELEKTLL 657
>UNIPROTKB|Q9UHC1 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0005712 "chiasma"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=NAS;IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=NAS;IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003696 "satellite
DNA binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0008104 GO:GO:0003682 GO:GO:0016887 GO:GO:0006298
GO:GO:0019237 Reactome:REACT_111183 GO:GO:0001673 GO:GO:0003697
EMBL:AL049780 GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874
MIM:114500 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0007130 Orphanet:144 GO:GO:0003696 GO:GO:0007144
GO:GO:0000795 eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AF195657 EMBL:AF195658
EMBL:AB039667 EMBL:AY963685 EMBL:L40399 IPI:IPI00005811
IPI:IPI00218050 RefSeq:NP_001035197.1 UniGene:Hs.436650
ProteinModelPortal:Q9UHC1 SMR:Q9UHC1 IntAct:Q9UHC1 STRING:Q9UHC1
PhosphoSite:Q9UHC1 DMDM:13878584 PaxDb:Q9UHC1 PRIDE:Q9UHC1
DNASU:27030 Ensembl:ENST00000238662 Ensembl:ENST00000355774
Ensembl:ENST00000556740 GeneID:27030 KEGG:hsa:27030 UCSC:uc001xrd.1
UCSC:uc001xre.1 CTD:27030 GeneCards:GC14M075481 HGNC:HGNC:7128
MIM:604395 MIM:614385 neXtProt:NX_Q9UHC1 PharmGKB:PA30845
HOGENOM:HOG000140944 HOVERGEN:HBG006375 InParanoid:Q9UHC1 KO:K08739
OMA:HGAIKFN PhylomeDB:Q9UHC1 ChiTaRS:MLH3 GenomeRNAi:27030
NextBio:49558 ArrayExpress:Q9UHC1 Bgee:Q9UHC1 CleanEx:HS_MLH3
Genevestigator:Q9UHC1 GermOnline:ENSG00000119684 Uniprot:Q9UHC1
Length = 1453
Score = 380 (138.8 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45
Identities = 109/353 (30%), Positives = 180/353 (50%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYF-TSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMD--PRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAA--SFDCSD----SWKANNGF 295
SGYISS ++ K Q++++N R V + +HKL++ L S C + + N
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
L+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 LR-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 196 (74.1 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45
Identities = 79/283 (27%), Positives = 125/283 (44%)
Query: 1128 NISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLA 1187
+++ IHN + G++H D+ +CL K + + AGG L
Sbjct: 1167 SLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGE-------AGGNLL 1219
Query: 1188 V-IDQHAADERIRLEEL-----RHKVLSGEGKSV---AYLDAEQELVLPEIGYQLLQNFA 1238
V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL +
Sbjct: 1220 VLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCYH 1279
Query: 1239 EQIKDWGW-ICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQL 1297
+ ++D G T S + L + L ++ + + E L+ L
Sbjct: 1280 KNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLELL 1339
Query: 1298 ADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
T G T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+
Sbjct: 1340 QTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPS 1399
Query: 1357 TVPLVNLEALH--KQI----AQLNNSSELWHGLHRGEISLKRA 1393
+PL +++ L KQI +L ++ W + E +++
Sbjct: 1400 MLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1442
Score = 46 (21.3 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 598 KHTPELKEENSKRELVSQPK-YSSKLLD--CPFAE---CLSPVLRKIDLHGW 643
K+ P ++ NS S P+ Y +++ C F E C+ P I+ W
Sbjct: 282 KNGPTSRQMNSSLRHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNW 333
Score = 39 (18.8 bits), Expect = 6.9e-29, Sum P(2) = 6.9e-29
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 1074 KIESSTILD-LEETHKAENFKLSLCPHAHL 1102
K+ SST++ LE T E +L C H +L
Sbjct: 1253 KLLSSTLIPPLEITVTEEQRRLLWCYHKNL 1282
>UNIPROTKB|G3V419 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 Pfam:PF01119 Pfam:PF02518 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 EMBL:AL049780
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 HGNC:HGNC:7128 ChiTaRS:MLH3
ProteinModelPortal:G3V419 SMR:G3V419 Ensembl:ENST00000556257
ArrayExpress:G3V419 Bgee:G3V419 Uniprot:G3V419
Length = 1275
Score = 380 (138.8 bits), Expect = 5.7e-42, Sum P(2) = 5.7e-42
Identities = 109/353 (30%), Positives = 180/353 (50%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYF-TSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMD--PRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAA--SFDCSD----SWKANNGF 295
SGYISS ++ K Q++++N R V + +HKL++ L S C + + N
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
L+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 LR-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 162 (62.1 bits), Expect = 5.7e-42, Sum P(2) = 5.7e-42
Identities = 40/109 (36%), Positives = 58/109 (53%)
Query: 1292 EFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1350
E L+ L T G T P +V +VL S+AC GAI F D L E ++E L L FQC
Sbjct: 1156 EQLELLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQC 1215
Query: 1351 AHGRPTTVPLVNLEALH--KQI----AQLNNSSELWHGLHRGEISLKRA 1393
AHGRP+ +PL +++ L KQI +L ++ W + E +++
Sbjct: 1216 AHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1264
Score = 46 (21.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 598 KHTPELKEENSKRELVSQPK-YSSKLLD--CPFAE---CLSPVLRKIDLHGW 643
K+ P ++ NS S P+ Y +++ C F E C+ P I+ W
Sbjct: 282 KNGPTSRQMNSSLRHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNW 333
>DICTYBASE|DDB_G0283883 [details] [associations]
symbol:mlh3 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 dictyBase:DDB_G0283883 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AAFI02000057 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390 PANTHER:PTHR10073
KO:K08739 RefSeq:XP_638891.4 EnsemblProtists:DDB0232420
GeneID:8624288 KEGG:ddi:DDB_G0283883 InParanoid:Q54QI0 OMA:NECNIPF
Uniprot:Q54QI0
Length = 1658
Score = 295 (108.9 bits), Expect = 1.4e-39, Sum P(3) = 1.4e-39
Identities = 77/219 (35%), Positives = 116/219 (52%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGK-SVAY 1217
I K L++ K + Q D KF+ A G + ++DQHA ERI+LE L K GE K +
Sbjct: 1459 IPKEMLQNFKFITQWDNKFLICEADGIVLILDQHAVSERIKLEILERKYF-GENKFDLCP 1517
Query: 1218 LDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAV 1277
+ L E +L++ + + ++ WG+ +FNK T I + V
Sbjct: 1518 MPERTRWSLTEYELELMRIYTKPLEQWGF--------KWTFNK---------TSINISQV 1560
Query: 1278 P--CIFGVNLSDVDLLEFLQQLADTDGS-STTPPSVLRVLNSKACRGAIMFGDSLLPSEC 1334
P C+ G+ ++D L EFL QL + G+ S PP+ R+L SKACR AI FG+ L C
Sbjct: 1561 PMFCLVGLGVND--LREFLYQLESSKGATSNRPPAAHRILASKACRTAIKFGNKLSREIC 1618
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1373
++E+L + ++ FQCAHGRP+ +PL+N L + L
Sbjct: 1619 IKLLEDLNECNIPFQCAHGRPSIIPLINYGKLFSSVKGL 1657
Score = 233 (87.1 bits), Expect = 1.4e-39, Sum P(3) = 1.4e-39
Identities = 92/371 (24%), Positives = 160/371 (43%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAG---ATKVFVYVGVCNCYVKVVDDGSGI 63
+ E + N++ + + ++ + L F D G + + +VG NC K+ S
Sbjct: 49 IEEIIFNSIDARATVISISINLSNLSFEVKDNGFGLSYENLKFVGDRNCTSKI---NSLS 105
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP- 122
L G R + + L +++ +D + +FG + S V +I+ +
Sbjct: 106 DLKSLKTFGYRGESLASLSNISSLDIISN--SFGSTIQKSISFGKVDQFKILDNNNSSSC 163
Query: 123 -NGYRKVMKGSKCLYLGIDDERKDVGTTVVS-RDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
N V + + ++ T+V RDLF N PVRR+ + K++ +KK
Sbjct: 164 DNNNNNVNNNN----INNNNNNSIANGTIVKIRDLFKNYPVRRQGLYHPNLKLI--IKKR 217
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEV-------- 232
+ IAL PK+ F D +L T +G E + L+ V
Sbjct: 218 IEIIALSFPKIVFSVYDETKSLTILKTPKDTSFLSYFKHFYGQEMMNKLEYVTSENYNNT 277
Query: 233 -NANDGALEISGYISSPYDSISV-KAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSW- 289
N N + +SGY+SSP+ K+FQY+Y+N+R V +H+ +N L + ++
Sbjct: 278 TNNNSSSYYLSGYLSSPHKKGHPNKSFQYIYLNNRIVLNTKLHRHVNQLYQKYRLFNATR 337
Query: 290 KANNGFLK-GKRSKSQACPAYLLNLRCPHSLYDLTFDPL-KTHVVFKDWEPVLAFIERAI 347
KAN K K+ + P ++L LRC Y+ +++P KT + F DW+ LA I+ +
Sbjct: 338 KANANVSKIAKKEVIDSNPIFILFLRCSQLEYERSYEPSSKTFLEFNDWKKPLAEIQNVL 397
Query: 348 RSAWMKKIAHD 358
K + D
Sbjct: 398 TKFLTKHRSDD 408
Score = 223 (83.6 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 47/117 (40%), Positives = 77/117 (65%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I +L E V VRS V+ L + +EE++FNS+DA AT + + + + N +V D+G G+
Sbjct: 25 IKKLKEEVSLKVRSSVVIVSLEQAIEEIIFNSIDARATVISISINLSNLSFEVKDNGFGL 84
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
S + L +G+R+ TSK+ L+D+ + TFG+RGE+LAS+S++S L+II+ + G
Sbjct: 85 SYENLKFVGDRNC-TSKINSLSDLKS---LKTFGYRGESLASLSNISSLDIISNSFG 137
Score = 50 (22.7 bits), Expect = 1.4e-39, Sum P(3) = 1.4e-39
Identities = 39/198 (19%), Positives = 77/198 (38%)
Query: 453 PPKIDHRVWTIESSWFQDHQPSRHLFSPPLENLKKEGDHLFRKECERITFGDA---EKDP 509
PP+I + SS QD + + L SPP ++ +H + E + + EK+
Sbjct: 1256 PPQIQNN-----SSSDQDEEYNASLTSPPPSPKQQYQNHYEQNEKGNLFIKEEKEKEKEK 1310
Query: 510 AELQEENTEMEYVPQPKYSFGLSDGSFAKCLPIVPWKIDRHAWTIESSRFQYHQSSPHLY 569
+ +E+ E E + + L + + K D ++ H H
Sbjct: 1311 EKEKEKEKEKELEKEKELEKELEKEKELEKEKELKKKNDDEVQQVQEKEHDDHCCPTHNI 1370
Query: 570 SSPLENLSKEGDHLFREECERITFGEFEKHTPELKEEN-SKRELVSQPKYSSKLLDCPFA 628
L LS G+ +E + + G+ ++ + + + SK EL + Y+ + F
Sbjct: 1371 GDHL-TLSGIGN--IKEHQDDESLGDDDEEKEFIHDSDYSKIELAKKYNYTDDRISPFFD 1427
Query: 629 ECLSPVLRKIDLHGWTSG 646
+ + P + D++ SG
Sbjct: 1428 KSIKPGVEMKDININVSG 1445
Score = 41 (19.5 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 1126 NNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVA 1182
NNN++ + N +N I++G + + F + + L L+ + KK I ++A
Sbjct: 167 NNNVNNNNINNNNNNSIANGTIVKIRDLFKNYPVRRQGLYHPN-LKLIIKKRIEIIA 222
Score = 40 (19.1 bits), Expect = 3.0e-37, Sum P(4) = 3.0e-37
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 933 NSSEDFCKYLQEHDPCNKFSREHSD 957
N +D LQ DP SR+ +D
Sbjct: 674 NKKDDTASTLQTTDPYESSSRDVTD 698
Score = 38 (18.4 bits), Expect = 2.7e-37, Sum P(3) = 2.7e-37
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 1126 NNNISCDIHNQDNI 1139
NN+ SCD +N +N+
Sbjct: 158 NNSSSCD-NNNNNV 170
Score = 37 (18.1 bits), Expect = 3.1e-38, Sum P(3) = 3.1e-38
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 468 FQDHQPSRHLFSPPLENLKKEGD 490
F + + S L S P++ LK E D
Sbjct: 1055 FDEDEKSNTL-SSPIKKLKTEND 1076
Score = 37 (18.1 bits), Expect = 3.0e-37, Sum P(4) = 3.0e-37
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 574 ENLSKEGDHLFREECE--RITFGEFEKHTPELKEENSKRELVS 614
EN +G + ++ + +I E E+H LKE +++ ++
Sbjct: 503 ENEDHQGMQIGFDDLDNNQIDSSEDEEHLKRLKEIEEEKQYIN 545
>UNIPROTKB|Q75F21 [details] [associations]
symbol:AAL093C "AAL093Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR014790
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 InterPro:IPR020568
SUPFAM:SSF54211 EMBL:AE016814 GenomeReviews:AE016814_GR
GO:GO:0007131 GO:GO:0032407 GO:GO:0000795 GO:GO:0005712
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073 KO:K08739
OMA:KACRSAI OrthoDB:EOG46X2HJ RefSeq:NP_982449.1
ProteinModelPortal:Q75F21 STRING:Q75F21 EnsemblFungi:AAS50273
GeneID:4618574 KEGG:ago:AGOS_AAL093C PhylomeDB:Q75F21
Uniprot:Q75F21
Length = 734
Score = 268 (99.4 bits), Expect = 1.5e-35, Sum P(4) = 1.5e-35
Identities = 117/393 (29%), Positives = 184/393 (46%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I+RL E+V +RS + + V EL+ NSVDA ++ V V + V V DDG G+
Sbjct: 9 IHRLEESVFLRLRSQLSIVSVGAAVRELMQNSVDACCGRLEVSVDLDRWRVHVRDDGEGL 68
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 123
+R+ L +G+ H TSKL L D+ T T+GFRGE L +S++S + +++K G +
Sbjct: 69 NREELAKVGQWHY-TSKLRRLEDL---TATDTYGFRGEGLYMLSNISRVILLSKRAGMKH 124
Query: 124 G-YRKVMKGSKCLYLGIDDERK-DV--GTTVVSRDLFYNQPVRRKYM-QSSPKKVLHSVK 178
++ L DD R D GTTV+ DLFYN P+RR+ + ++ P ++ ++
Sbjct: 125 AALHRLPATDNALPRDSDDIRLLDGAHGTTVILEDLFYNLPIRRRMLARTPPHRLYDEIR 184
Query: 179 KCVLRIALVHP--KVSFKFIDMESEDELLCTCXXXXXXXXXXXX------FG-IEDFSFL 229
VL++ L +VS I E +++ + G + L
Sbjct: 185 ADVLQLLLFCQTLQVSVLVIKNNQEKQIVRSGNLTQLTFPDTLMAVLMCCLGPVVAAKDL 244
Query: 230 DEVNANDGALEISGYISSPYDSISVKAFQYVYINSR-YVCKGPIHKLLNHLAASFDCSDS 288
V+A +E+ G IS+ + K +Q++YIN R Y K I N L S
Sbjct: 245 QYVSAKYQDIEVQGVISTV--GVPSKDYQFIYINKRRYEDKRFIFGF-NKLFRSA----R 297
Query: 289 WKANNGFLKGKRSKSQAC---PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIER 345
+K +N R QA P YLL + P S+ DL +P K + ++ VL +
Sbjct: 298 YKEDNMLAASTRGGQQAYSGYPVYLLVCKGPPSISDLLQNPSKV-IENLEYGRVLQPLLC 356
Query: 346 AIRSAWMKKIAHD--SF-DVDMLED---AELPL 372
+ ++++ H SF D M + AELPL
Sbjct: 357 QVAKSFLRHYGHATVSFLDRKMTRNRLRAELPL 389
Score = 163 (62.4 bits), Expect = 1.5e-35, Sum P(4) = 1.5e-35
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 1308 PSV-LRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1366
P+V L +LNSKACR AIMFGD L EC +V +L ++ +CAHGRP+ +P+ +L+ L
Sbjct: 660 PTVFLEILNSKACRSAIMFGDKLNHDECLFLVRQLSTCNMPLRCAHGRPSVIPIADLKGL 719
Score = 101 (40.6 bits), Expect = 1.5e-35, Sum P(4) = 1.5e-35
Identities = 45/163 (27%), Positives = 72/163 (44%)
Query: 1098 PHAHLGAQAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPD 1157
P A + + A+ T I+ +T N N+ + ISS L + E D
Sbjct: 433 PVASMNSSADATKILEHV----AKIRTRNINVGLPVQKPVGSGSISSSLA-FSDEHLSVD 487
Query: 1158 SINKSCLEDAKVLQQVDKKFI-----PVVAGGT--LAVIDQHAADERIRLE----ELRHK 1206
SI L+D V+ Q+ KFI P + T L ++DQHAADER++LE +
Sbjct: 488 SIQ---LKDCIVINQIGNKFILLKLEPSRSRTTPLLLILDQHAADERVKLEAYTRDYLFT 544
Query: 1207 VLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGW-IC 1248
+L+ + S + L +L ++ +I+ WG+ IC
Sbjct: 545 LLTAQ-PSFYTTPCSIAMDLTHTEADILLHYKREIEFWGFEIC 586
Score = 45 (20.9 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 1164 LEDAKVLQ----QVDKKFIPVVAGGTLAVIDQHAADERIRLE 1201
LE +VLQ QV K F+ T++ +D+ R+R E
Sbjct: 345 LEYGRVLQPLLCQVAKSFLRHYGHATVSFLDRKMTRNRLRAE 386
Score = 37 (18.1 bits), Expect = 1.5e-35, Sum P(4) = 1.5e-35
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 470 DHQPSRHLFSPPLENLKKEGD 490
+ P R ++PP+ ++ D
Sbjct: 422 NQHPKRKKYNPPVASMNSSAD 442
Score = 37 (18.1 bits), Expect = 2.5e-11, Sum P(4) = 2.5e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 160 PVRRKYMQSSPKKVLHS 176
P++ K Q +P+ LHS
Sbjct: 390 PIQGKTDQDAPESSLHS 406
>SGD|S000006085 [details] [associations]
symbol:MLH3 "Protein involved in mismatch repair and meiotic
recombination" species:4932 "Saccharomyces cerevisiae" [GO:0005712
"chiasma" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IPI] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006298 "mismatch repair" evidence=IEA;IMP] [GO:0005634
"nucleus" evidence=IEA;IPI] [GO:0030983 "mismatched DNA binding"
evidence=IEA;IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR014790
Pfam:PF08676 SMART:SM00853 SGD:S000006085 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 EMBL:BK006949 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:X96770 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0000795 eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390
PANTHER:PTHR10073 KO:K08739 EMBL:Z73520 PIR:S65175
RefSeq:NP_015161.1 ProteinModelPortal:Q12083 SMR:Q12083
DIP:DIP-2414N IntAct:Q12083 MINT:MINT-678752 STRING:Q12083
EnsemblFungi:YPL164C GeneID:855939 KEGG:sce:YPL164C CYGD:YPL164c
GeneTree:ENSGT00550000074903 HOGENOM:HOG000113600 OMA:KACRSAI
OrthoDB:EOG46X2HJ NextBio:980696 Genevestigator:Q12083
GermOnline:YPL164C Uniprot:Q12083
Length = 715
Score = 234 (87.4 bits), Expect = 6.9e-34, Sum P(3) = 6.9e-34
Identities = 71/214 (33%), Positives = 112/214 (52%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I +L V ++S L V E+V NSVDA AT + V + + N V DDG G+
Sbjct: 5 IRKLDSDVSERLKSQACTVSLASAVREIVQNSVDAHATTIDVMIDLPNLSFAVYDDGIGL 64
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 123
+R L +L ++ TSK+ M+D + T+G+RG+AL SIS+VS L + +K +
Sbjct: 65 TRSDLNILATQNY-TSKI---RKMNDLVTMKTYGYRGDALYSISNVSNLFVCSKKKDYNS 120
Query: 124 GY-RKVMKGSKCL----YLGIDD-------ERKDVGTTVVSRDLFYNQPVRRKYMQSSPK 171
+ RK S L L ID R GT V+ D+ YN PVRR+ ++ P
Sbjct: 121 AWMRKFPSKSVMLSENTILPIDPFWKICPWSRTKSGTVVIVEDMLYNLPVRRRILKEEPP 180
Query: 172 -KVLHSVKKCVLRIALVHPKVSFKFIDMESEDEL 204
K +++K +L+I ++HP +S ++++ D+L
Sbjct: 181 FKTFNTIKADMLQILVMHPMIS---LNVQYTDKL 211
Score = 163 (62.4 bits), Expect = 6.9e-34, Sum P(3) = 6.9e-34
Identities = 44/140 (31%), Positives = 70/140 (50%)
Query: 1229 IGYQLLQNFAE----QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVN 1284
IGY+ ++ E +IK + G + + K + LLQ + +P ++
Sbjct: 581 IGYETIEGTMETSLLEIKTLPEMLTSKYNGDKDYLKMV-LLQHAHDLKDFKKLP----MD 635
Query: 1285 LSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1344
LS + + +L SS P +LNSKACR A+MFGD L EC +++ +L +
Sbjct: 636 LSHFENYTSVDKLYWWKYSSCVPTVFHEILNSKACRSAVMFGDELTRQECIILISKLSRC 695
Query: 1345 SLCFQCAHGRPTTVPLVNLE 1364
F+CAHGRP+ VP+ L+
Sbjct: 696 HNPFECAHGRPSMVPIAELK 715
Score = 162 (62.1 bits), Expect = 4.8e-26, Sum P(3) = 4.8e-26
Identities = 59/222 (26%), Positives = 96/222 (43%)
Query: 143 RKDVGTTVVSRDLFYNQPVRRKYMQSSPK-KVLHSVKKCVLRIALVHPKVSF--KFID-M 198
R GT V+ D+ YN PVRR+ ++ P K +++K +L+I ++HP +S ++ D +
Sbjct: 152 RTKSGTVVIVEDMLYNLPVRRRILKEEPPFKTFNTIKADMLQILVMHPMISLNVQYTDKL 211
Query: 199 ESEDELLCTCXXXXXXXXXXXX--------FG-IEDFSFLDEVNANDGALEISGYISSPY 249
E+L FG I L +V+ +I G IS
Sbjct: 212 RINTEVLFRSKNITEGLTKHQQMSQVLRNVFGAIIPPDMLKKVSLKFNEYQIEGIISKM- 270
Query: 250 DSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR-SKS-QACP 307
+ +K Q++YIN R ++ L F D + LK K K ++ P
Sbjct: 271 -PVGLKDLQFIYINGRRYADSAFQGYVDSL---FQAQDFGEKGMSLLKTKSVGKPYRSHP 326
Query: 308 AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
++L++RCP ++ DL DP K V + I + IRS
Sbjct: 327 VFILDVRCPQTIDDLLQDPAKKIVKPSHIRTIEPLIVKTIRS 368
Score = 113 (44.8 bits), Expect = 6.9e-34, Sum P(3) = 6.9e-34
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 1158 SINKSCLEDAKVLQQVDKKFIPV------VAGGTLAV-IDQHAADERIRLEELRHKVLSG 1210
SI++S L +V+ QVDKKFI + + L V +DQHA DERIRLEEL + +L+
Sbjct: 484 SISRSVLAKYEVINQVDKKFILIRCLDQSIHNCPLLVLVDQHACDERIRLEELFYSLLTE 543
Query: 1211 --EGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
G VA + + + L +++ + K WG
Sbjct: 544 VVTGTFVARDLKDCCIEVDRTEADLFKHYQSEFKKWG 580
>POMBASE|SPAC19G12.02c [details] [associations]
symbol:pms1 "MutL family mismatch-repair protein Pms1"
species:4896 "Schizosaccharomyces pombe" [GO:0000228 "nuclear
chromosome" evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006298 "mismatch repair" evidence=IGI;IMP]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 PomBase:SPAC19G12.02c Prosite:PS00058
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0000228 GO:GO:0043570 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 EMBL:X96581 PIR:T37989
RefSeq:NP_594417.1 ProteinModelPortal:P54280 STRING:P54280
EnsemblFungi:SPAC19G12.02c.1 GeneID:2542582 KEGG:spo:SPAC19G12.02c
HOGENOM:HOG000165474 OMA:LDKPWNC OrthoDB:EOG4FFH9B NextBio:20803632
Uniprot:P54280
Length = 794
Score = 245 (91.3 bits), Expect = 8.0e-34, Sum P(3) = 8.0e-34
Identities = 91/300 (30%), Positives = 144/300 (48%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M T+ + + + SG V+ D+ V+ELV NS+D+GAT + F G+ + ++VV
Sbjct: 1 MSTVKPIDANTVHKICSGQVITDVASAVKELVENSLDSGATTIEIRFKNYGINS--IEVV 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+GSGI +G++H TSK+ D +D + TFGFRGEAL+S+ V + I T
Sbjct: 59 DNGSGIDAGDYESIGKKHF-TSKI---TDFEDLEALQTFGFRGEALSSLCAVGQVIISTA 114
Query: 118 AHGR-PNGYRKVM--KGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
P G + + +GS L I +R GT+V+ DLF PVRRK ++ + K+
Sbjct: 115 TQNEAPKGVQLNLDHEGSLKDKLTIPFQR---GTSVMVNDLFCTLPVRRKLLEKNYKREF 171
Query: 175 HSVKKCVLRIALVHPKVSFK-FIDMESEDELL--CTCXXXXXXXXXXXXFGIEDFSFLDE 231
+ A + F + ++ +LL T FG + S L
Sbjct: 172 SKAISLLQAYATISTNKRFMVYHQTKNSGKLLQLSTNSNKDMKLNIMNVFGTKVSSSL-- 229
Query: 232 VNANDGALEISGYISSPYDSISVKAF---QYVYINSRYVCKGPIHKLLNHLAASFDCSDS 288
+ NDG +E GYIS P+ S +A Q ++IN R V I +++ + + + S
Sbjct: 230 IPWNDGIIE--GYISRPHVG-STRASNERQMLFINRRLVNLPKIARVIQEVFKPYSMAQS 286
Score = 208 (78.3 bits), Expect = 8.0e-34, Sum P(3) = 8.0e-34
Identities = 75/244 (30%), Positives = 115/244 (47%)
Query: 1127 NNISCDIHNQDNILDISS--GLLHLTGEFFIPDSIN----KSCLEDAKVLQQVDKKFIPV 1180
+ + DI D +L S+ G++H + D +N K+ +V+ Q ++ FI V
Sbjct: 565 SGVQKDIVRSDALLKFSNKIGVVHDISDENQEDHLNLTVHKADFLRMRVVGQFNRGFIVV 624
Query: 1181 VAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQ 1240
V G L +IDQHA+DE+ E L+ ++ Q+LVLP+ L A +
Sbjct: 625 VHGNNLFIIDQHASDEKFNYEHLKSNLVINS----------QDLVLPK----RLDLAATE 670
Query: 1241 IKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADT 1300
+ I +I + F ++L QR TLL+VP V DLLE + L++
Sbjct: 671 --ETVLIDHIDLIRRKGFGVAIDLNQRVGNRCTLLSVPTSKNVIFDTSDLLEIISVLSEH 728
Query: 1301 DGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1360
+ R+L SKACR ++M G +L SE IV L + S + C HGRPT L
Sbjct: 729 PQIDPFSSRLERMLASKACRSSVMIGRALTISEMNTIVRHLAELSKPWNCPHGRPTMRHL 788
Query: 1361 VNLE 1364
+ L+
Sbjct: 789 LRLK 792
Score = 58 (25.5 bits), Expect = 8.0e-34, Sum P(3) = 8.0e-34
Identities = 12/49 (24%), Positives = 27/49 (55%)
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
S +Q+ P + +NLR + D+ P K V + + ++ FI+ ++++
Sbjct: 282 SMAQS-PFFAINLRITNGTIDINVSPDKKSVFLSEEDSIIEFIKNSLQN 329
>UNIPROTKB|Q8TTB5 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:188937 "Methanosarcina acetivorans C2A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE010299 GenomeReviews:AE010299_GR
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 OMA:FLFINNR
RefSeq:NP_615486.1 ProteinModelPortal:Q8TTB5 GeneID:1472414
KEGG:mac:MA0522 ProtClustDB:CLSK449998
BioCyc:MACE188937:GI2O-589-MONOMER Uniprot:Q8TTB5
Length = 656
Score = 304 (112.1 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 85/262 (32%), Positives = 135/262 (51%)
Query: 13 NTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSGISRDGLVLL 71
N + +G V+ VV+ELV NS+DAGAT++ + V + + + D+G G+S+ +L
Sbjct: 17 NKIAAGEVIERPASVVKELVDNSIDAGATEIRIEVEKGGKHSILIRDNGCGMSKADALLS 76
Query: 72 GERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKG 131
E+HA TSKL + D+D + T GFRGEALASI+ ++ +EI+T+ G + V+ G
Sbjct: 77 YEKHA-TSKLTRIEDLDT---VSTMGFRGEALASITAIAKVEILTRPPEELTGTKLVIHG 132
Query: 132 SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKV 191
K D GT+V ++LFYN P RRKY++S ++ H + V R+AL +P +
Sbjct: 133 GKVQETS--DAGTAPGTSVYVKELFYNTPARRKYLKSDRTELAH-ITDTVTRLALANPGI 189
Query: 192 SFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEISGYISSPYDS 251
SF + E + + T G + + + EI GY+S P +
Sbjct: 190 SFTLLS-EGKPVIRST-GSSDLFKSLVNLLGPDTARSMLPLEYRTEDFEIRGYVSKPETN 247
Query: 252 ISVKAFQYVYINSRYVCKGPIH 273
YV++N+R V I+
Sbjct: 248 RGGSDQLYVFVNTRPVTSRAIN 269
Score = 97 (39.2 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 1160 NKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-LRHK 1206
N LED +++ QV K +I G L +IDQHAA ER+ E+ LR K
Sbjct: 463 NTDLLEDLRIIGQVSKMYILAEKGEDLVIIDQHAAHERVLYEQVLRTK 510
Score = 90 (36.7 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 29/104 (27%), Positives = 48/104 (46%)
Query: 1271 VITLLAVPCIFGVNLSDVDLL-EFLQQLADTDGSSTTPPSVL-RVLNSKACRGAIMFGDS 1328
V+T VP +FG L D ++ + + L +G + +V + ACR AI G +
Sbjct: 556 VVTF--VPEVFG-RLEDTGVIHDVISDLL-AEGKVKKDTGISEKVSKTLACRAAIKGGAA 611
Query: 1329 LLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQ 1372
+ ++E+LK + C HGRPT + E L + A+
Sbjct: 612 CNTRQMEELIEQLKAAESPYSCPHGRPTVITFTKGE-LDRMFAR 654
>TIGR_CMR|BA_3904 [details] [associations]
symbol:BA_3904 "DNA mismatch repair protein MutL"
species:198094 "Bacillus anthracis str. Ames" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 HOGENOM:HOG000256552
RefSeq:NP_846151.1 RefSeq:YP_020542.1 RefSeq:YP_029870.1
ProteinModelPortal:Q81WR4 IntAct:Q81WR4 DNASU:1085120
EnsemblBacteria:EBBACT00000009631 EnsemblBacteria:EBBACT00000015187
EnsemblBacteria:EBBACT00000021815 GeneID:1085120 GeneID:2814810
GeneID:2848877 KEGG:ban:BA_3904 KEGG:bar:GBAA_3904 KEGG:bat:BAS3617
OMA:FLFINNR ProtClustDB:PRK00095
BioCyc:BANT260799:GJAJ-3676-MONOMER
BioCyc:BANT261594:GJ7F-3793-MONOMER Uniprot:Q81WR4
Length = 626
Score = 330 (121.2 bits), Expect = 8.6e-32, Sum P(4) = 8.6e-32
Identities = 88/268 (32%), Positives = 140/268 (52%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKLF--HNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYV 267
I GY++ P + + + + +N RYV
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYV 258
Score = 71 (30.1 bits), Expect = 8.6e-32, Sum P(4) = 8.6e-32
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 1318 ACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV--PLVNLEALHKQI 1370
+C+ +I L + ++EEL+ T+ + C HGRP V LE + K++
Sbjct: 571 SCKASIKANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKRV 625
Score = 64 (27.6 bits), Expect = 8.6e-32, Sum P(4) = 8.6e-32
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
L +IDQHAA ERI E R KV G+ VA QEL++P
Sbjct: 457 LYMIDQHAAQERINYEYFRDKV----GR-VA--QEVQELLVP 491
Score = 54 (24.1 bits), Expect = 8.6e-32, Sum P(4) = 8.6e-32
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
P L++ L D+ P K V F + +L IE +++A+ KKI
Sbjct: 281 PIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAF-KKI 328
Score = 48 (22.0 bits), Expect = 3.6e-31, Sum P(4) = 3.6e-31
Identities = 24/86 (27%), Positives = 37/86 (43%)
Query: 1015 RYISLNCCSVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSSEEEDFRPDFK 1074
RY+ N ++A + HTL P G F ++ + + NV P+ E F
Sbjct: 256 RYVR-NFVLMKAIQQGYHTLLPVGRYP-IG-FLSIEMDPMLVDVNVHPAKLEVRFSK--- 309
Query: 1075 IESSTILDLEETHKAENFKLSLCPHA 1100
E + +EET +A K+ L P A
Sbjct: 310 -EQELLKLIEETLQAAFKKIQLIPDA 334
>CGD|CAL0003904 [details] [associations]
symbol:orf19.7257 species:5476 "Candida albicans" [GO:0032390
"MutLbeta complex" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014790 Pfam:PF08676 SMART:SM00387 SMART:SM00853
CGD:CAL0003904 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 eggNOG:COG0323 EMBL:AACQ01000092
PANTHER:PTHR10073 KO:K08739 RefSeq:XP_715055.1
ProteinModelPortal:Q59ZT5 STRING:Q59ZT5 GeneID:3643294
KEGG:cal:CaO19.7257 Uniprot:Q59ZT5
Length = 636
Score = 221 (82.9 bits), Expect = 3.0e-30, Sum P(3) = 3.0e-30
Identities = 66/204 (32%), Positives = 103/204 (50%)
Query: 1165 EDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQEL 1224
E +V+ QVD+KFI + A L V+DQHA+DERIR+E+ + +S + L +
Sbjct: 437 EKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQPNPGLR-LHSPIAF 495
Query: 1225 VLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVN 1284
+ L +A +G IC T ++ +L L+ +T + A +
Sbjct: 496 GVHASELMLFDQYAANFNSFG-ICYT-TDTAQVVITHLPLIL--LTKVEDDAEFLKDSLL 551
Query: 1285 LSDVDLLEFLQQLADT-----DGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1339
DL + +++++ + S P + ++NSKACR AIMFGD L E +V
Sbjct: 552 QHCYDLHDHVKRISPNFDNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMQDLVN 611
Query: 1340 ELKQTSLCFQCAHGRPTTVPLVNL 1363
+L + L FQCAHGRP+ VP+ NL
Sbjct: 612 KLSRCKLPFQCAHGRPSIVPIANL 635
Score = 212 (79.7 bits), Expect = 3.0e-30, Sum P(3) = 3.0e-30
Identities = 86/296 (29%), Positives = 146/296 (49%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I RL E+V +RS T+ L VV EL+ NS+DAGA ++ + + + + V + D+G+GI
Sbjct: 27 ILRLDESVITQIRSHTIFHSLDSVVRELLQNSLDAGANEITIKIDLSSLSVYIHDNGTGI 86
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA--HGR 121
+ D L + +H TSK H + ++GEAL ++ +S L II+KA +
Sbjct: 87 TPDDLEKVTLQHY-TSKW-H-----------SHNYKGEALFALKVISNLTIISKAPDYTT 133
Query: 122 P----NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPK-KVLHS 176
P N ++ Y I D GT V++ ++F N PVRR+ ++++P K++ +
Sbjct: 134 PFKLNNSVAELYNEYSGGYFQIGDINPQ-GTVVIAANMFRNIPVRREQIRTTPHAKLVEA 192
Query: 177 VKKCVLRIALVHPKVSFK-FIDMESE---DELLCTCXXXXXXXXXXXXFGIEDFSFLDEV 232
+K VL + +V+ K F+ + D+++ C FG++ F + V
Sbjct: 193 IKVAVLESLTPNARVNLKIFLVNHTTLQLDQIVAICGHSPLLFQL---FGVKT-KF-EPV 247
Query: 233 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKG-PIHKLLNHLAASFDCSD 287
A +++ G I + I+ K QYV++N R V K LN L +S +D
Sbjct: 248 RAKFKNIKVVGVIGR--EPITAK-HQYVFVNDRRVTLSLGESKRLNDLFSSSGFND 300
Score = 40 (19.1 bits), Expect = 3.0e-30, Sum P(3) = 3.0e-30
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 1005 SAPPFHRHKRRYI 1017
S PP HR +YI
Sbjct: 362 STPPIHRTSDKYI 374
>UNIPROTKB|Q89DE6 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224911 "Bradyrhizobium japonicum USDA 110" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0323 EMBL:BA000040
GenomeReviews:BA000040_GR HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GO:GO:0032300
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:NP_774133.1 ProteinModelPortal:Q89DE6 GeneID:1054324
KEGG:bja:blr7493 PATRIC:21198969
BioCyc:BJAP224911:GJEJ-7548-MONOMER Uniprot:Q89DE6
Length = 603
Score = 299 (110.3 bits), Expect = 8.4e-30, Sum P(4) = 8.4e-30
Identities = 87/267 (32%), Positives = 133/267 (49%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
+ +LPE V N + +G V+ VV+ELV N++DAGA+++ V+ G + + DDGSG
Sbjct: 3 VRQLPEQVVNRIAAGEVVERPASVVKELVENAIDAGASRIDVFTDGGGRRRIGITDDGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ L L ERHA TSKL D +D I T GFRGEAL SI V+ L I T+ G P
Sbjct: 63 MTAKDLALAVERHA-TSKL----DDEDLLQIRTLGFRGEALPSIGSVARLSITTRHAGEP 117
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+ + ++G + I GT V DLFY P R K++++ + ++++ V
Sbjct: 118 HAWALTVEGGE--KSEIMPAALAHGTRVEVNDLFYATPARLKFLKTDRTEA-EAIREVVR 174
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCX--XXXXXXXXXXXFGIEDFSFLDEVNANDGALE 240
R+A+ P V+F E G E S EV+A +
Sbjct: 175 RLAMARPDVAFTLAGEERAPVTWAAALPGAAGRLTRLGDILGAEFRSHAIEVHAEREGIV 234
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYV 267
+SGY ++P + + QY+++N R V
Sbjct: 235 VSGYAAAPALTKANALGQYLFVNGRPV 261
Score = 105 (42.0 bits), Expect = 8.4e-30, Sum P(4) = 8.4e-30
Identities = 24/89 (26%), Positives = 43/89 (48%)
Query: 1272 ITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLP 1331
+ + P + G + L + + +A+ D + ++ V + AC G++ G L P
Sbjct: 503 VAVRETPSLLGKTNAGGLLRDLSEHMAEWDEALPLERRLMHVAATMACHGSVRAGRRLRP 562
Query: 1332 SECALIVEELKQTSLCFQCAHGRPTTVPL 1360
E ++ E+++T QC HGRPT V L
Sbjct: 563 EEMNALLREMEETPNSGQCNHGRPTYVEL 591
Score = 61 (26.5 bits), Expect = 8.4e-30, Sum P(4) = 8.4e-30
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI 1229
Q+ + +I L ++DQHAA ERI E L+ L+ G Q L++PEI
Sbjct: 420 QIHETYIVSQTRDGLIIVDQHAAHERIVYEGLKAS-LAANGVQ------RQILLIPEI 470
Score = 41 (19.5 bits), Expect = 7.3e-22, Sum P(2) = 7.3e-22
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 271 PIHKLLNHLAASFDCSDSWKA 291
P+ + L H+AA+ C S +A
Sbjct: 536 PLERRLMHVAATMACHGSVRA 556
Score = 37 (18.1 bits), Expect = 8.4e-30, Sum P(4) = 8.4e-30
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 321 DLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
D P KT V F++ V A I ++ A
Sbjct: 298 DANVHPAKTEVRFRNAGLVRALIVHGLKEA 327
>UNIPROTKB|Q69L72 [details] [associations]
symbol:OSJNBa0016G10.12 "Os02g0592300 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0009555
GO:GO:0016887 GO:GO:0048316 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008208 EMBL:CM000139
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
EMBL:AP005874 RefSeq:NP_001047292.1 UniGene:Os.23276 STRING:Q69L72
EnsemblPlants:LOC_Os02g37920.1 GeneID:4329835 KEGG:osa:4329835
ProtClustDB:CLSN2689293 Uniprot:Q69L72
Length = 923
Score = 276 (102.2 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 103/372 (27%), Positives = 159/372 (42%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I + ++ + + SG V+FDL+ V+ELV NS+DAGAT V V + V D+G+G
Sbjct: 9 IRPIGKSAVHRICSGQVIFDLSSAVKELVENSLDAGATTVEVTLRSYGEDSFTVADNGTG 68
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
IS L +H TSK+ +D D + TFGFRGEAL+S+ + L + T+ P
Sbjct: 69 ISPTNFQALALKHH-TSKI---SDFGDLASVATFGFRGEALSSLCALGKLTVETRTKDEP 124
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G R S + G + VGT V LF PVR K + +K V +
Sbjct: 125 VGTRLEFAHSGVV-TGERKMARPVGTAVTVEKLFSTLPVRSKEFSRNIRKEYGKVISLLN 183
Query: 183 RIALVHPKVSF---KFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNA--NDG 237
AL+ V + S+ +L T FG+ F L N ++G
Sbjct: 184 AYALIAKGVRLVCTNTVGKNSKSAVLRTQGSSSLKDNIITVFGLNTFKCLQPFNVTISEG 243
Query: 238 ALEISGYISSPYDSISVKAF--QYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
++ G++S P + Q+ Y+N R V + KL+N L S
Sbjct: 244 C-QVDGFLSKPGPGSGRNSGDRQFFYVNGRPVDMPKVSKLVNELYRS------------- 289
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
S ++ P +LN P + YD+ P K + F +L + I + + +
Sbjct: 290 -----SNAKQYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEHAILLSLREGIENLYCPQQ 344
Query: 356 AHDSFDVDMLED 367
SF ++ +ED
Sbjct: 345 C--SFSINSVED 354
Score = 147 (56.8 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 103/447 (23%), Positives = 174/447 (38%)
Query: 936 EDFCKYLQE-----HDPCNKFSREHSDVPFDKTDWLCSVLSSIEYDNPETQRYKFRNHNC 990
ED C + E C + R +D+ + L S +S+I N R+H+
Sbjct: 492 EDSCNLISEAPVLRRGTCLEQVRR-TDLGVNSPTALTSRVSNIPEVNAPQGTNPLRHHSL 550
Query: 991 EPNPIHKELSRRSHSAPP-FHRHKRRYISLNCCSVEAGKSNAHTLHCAKNSPEAGAFKHL 1049
+ HS PP H+ L C V A +S H +S + GA
Sbjct: 551 QSFVPEMPEDSPQHSEPPNIVSHRDEVPQLRPCDVHATESEVDNQHDPCHS-KFGAPSR- 608
Query: 1050 QQSSGVCNANVKPSSEEEDFR-PDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQAEG 1108
C+ V+P ++ + PD + D ++ + A L +
Sbjct: 609 ------CS-EVEPQNKLTNISLPDAHYDGH---DTAAHSGQSSYPVMQFTLADLRRRRRH 658
Query: 1109 TSIISGTKWRNGHPQTTNN---NISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLE 1165
+ +IS K + P+ + + D + DN S+ L T E + +K
Sbjct: 659 SFMISHAK-KGSFPEKSTRCYKAATLDNYVPDNEEGKSNSLAAATSE--LDKLFSKDDFG 715
Query: 1166 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL----DAE 1221
+ +V+ Q + FI L ++DQHAADE+ E L + L E
Sbjct: 716 EMEVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFENLSQSTTLNIQPLLQPLRLDLSPE 775
Query: 1222 QELVLPEIGYQLLQNFAEQIKDW-GWICNIHTQGSRSFNKNLNLLQRQIT-VITLLAVPC 1279
+E+++ + +N +D CN + + F+KN+ + + +I++LA
Sbjct: 776 EEVIVSMNMSTIRKNGFVLAEDLHASPCNRYFIKAVPFSKNITFGAQDVKELISMLAD-- 833
Query: 1280 IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1339
+ D ++ + L TD S P V +L S+ACR + M GD L +E I++
Sbjct: 834 ----SQGDCSIISSYK-LDRTD--SICPSRVRAMLASRACRMSTMIGDPLTKTEMKKILK 886
Query: 1340 ELKQTSLCFQCAHGRPTTVPLVNLEAL 1366
L + C HGRPT L +L A+
Sbjct: 887 NLTGLRSPWNCPHGRPTMRHLADLHAI 913
Score = 40 (19.1 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 688 EPGVSNGASGTASPLDK----DEFSNEFEV 713
E G SN + S LDK D+F E EV
Sbjct: 691 EEGKSNSLAAATSELDKLFSKDDFG-EMEV 719
>TIGR_CMR|SPO_3362 [details] [associations]
symbol:SPO_3362 "DNA mismatch repair protein MutL"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:YP_168558.1 ProteinModelPortal:Q5LN50 GeneID:3194545
KEGG:sil:SPO3362 PATRIC:23380177 Uniprot:Q5LN50
Length = 621
Score = 275 (101.9 bits), Expect = 3.6e-29, Sum P(3) = 3.6e-29
Identities = 107/356 (30%), Positives = 153/356 (42%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDDGSG 62
I +L E N + +G V+ V+ELV N++DAGAT++ + + ++V DDG G
Sbjct: 15 IRQLDETAINRIAAGEVVERPASAVKELVENAIDAGATRIAIDLADGGKTLIRVSDDGCG 74
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ D L L RHA TSK+ D D I TFGFRGEAL S+ V L I ++A G
Sbjct: 75 MTPDQLPLALARHA-TSKI----DGSDLLNIHTFGFRGEALPSLGSVGRLTITSRARGAE 129
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+V G + GT V RDLF+ P R K+M++ + +V V
Sbjct: 130 AANIRVSGGRVD---PVKPAALRAGTVVELRDLFFATPARLKFMRTDRAEA-QAVADTVK 185
Query: 183 RIALVHPKVSFKFIDMES--EDELLCTCXXXXXXXXXXXXFGIEDF---SFLDE---VNA 234
R+A+ P VSF D+ E L+ + F D ++
Sbjct: 186 RLAMAEPSVSFTLRDVSGGGEGRLVFRADAETGDLFDALRDRLAQVMGREFTDNALRIDT 245
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
L + GY + P S QY+++N R V + L AA FD
Sbjct: 246 MREGLRLYGYAALPTYSRGAAVAQYLFVNGRPVRDKMLTGALR--AAYFD---------- 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
FL R PA L + C +L D+ P K+ V F+D I A+R A
Sbjct: 294 FLSRDRH-----PAAALFIDCDPTLVDVNVHPAKSEVRFRDPGVARGLIVSALRHA 344
Score = 114 (45.2 bits), Expect = 3.6e-29, Sum P(3) = 3.6e-29
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 1272 ITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLP 1331
+ + P I G + L + L +LAD S+T + +L+ AC G+I G +
Sbjct: 521 VAVRETPAILGPVDAGAMLRDILDELADQGESATLQARIEAILSRVACHGSIRSGRRMRG 580
Query: 1332 SECALIVEELKQTSLCFQCAHGRPTTVPL 1360
E ++ E++ T QC HGRPT V L
Sbjct: 581 EEMNALLREMEATPHSGQCNHGRPTYVEL 609
Score = 69 (29.3 bits), Expect = 3.6e-29, Sum P(3) = 3.6e-29
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI 1229
QV + +I + ++DQHAA ER+ E+L+ + ++ G A Q L++PEI
Sbjct: 438 QVHENYIIAQTADGMVIVDQHAAHERLVYEKLKRQ-MAETGV------AAQALLIPEI 488
>TIGR_CMR|CBU_1083 [details] [associations]
symbol:CBU_1083 "DNA mismatch repair protein MutL"
species:227377 "Coxiella burnetii RSA 493" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323 HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:NP_820082.2 ProteinModelPortal:Q83CM9 SMR:Q83CM9
GeneID:1208984 KEGG:cbu:CBU_1083 PATRIC:17930897
BioCyc:CBUR227377:GJ7S-1075-MONOMER Uniprot:Q83CM9
Length = 574
Score = 308 (113.5 bits), Expect = 7.0e-29, Sum P(4) = 7.0e-29
Identities = 89/269 (33%), Positives = 137/269 (50%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGAT--KVFVYVGVCNCYVKVVDDGS 61
I RL + N + +G V+ VV+EL+ NS+DA A+ +V + G +++ DDG
Sbjct: 3 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAK-QIRIQDDGD 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI + LVL ERHA TSK+ + D+ D T T GFRGEALASIS VS L + ++
Sbjct: 62 GIHPEDLVLALERHA-TSKIAKIDDLQDIT---TLGFRGEALASISAVSRLTLTSRQKNA 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
GYR + S + + GTT+ +DLFYN P RRK+++S + H +++ +
Sbjct: 118 EMGYR-ISNISHKIMTPVPAAHPQ-GTTIDVQDLFYNTPARRKFLRSPATEFQH-IRRII 174
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNA---NDGA 238
R+AL H + +F+ +E E++ I F+ A +
Sbjct: 175 ERLALSH--FTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIEFSQSG 232
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYV 267
L + GYI+ + S QY+Y+N R+V
Sbjct: 233 LTLKGYIAEAAYTRSQPDLQYIYVNGRFV 261
Score = 64 (27.6 bits), Expect = 7.0e-29, Sum P(4) = 7.0e-29
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
PAY+L L + D+ P K V F+D + V F+ A+++A
Sbjct: 284 PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTA 327
Score = 63 (27.2 bits), Expect = 7.0e-29, Sum P(4) = 7.0e-29
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 1284 NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQ 1343
NL ++ + + L L + +S + L + AC A+ L E ++ E+++
Sbjct: 486 NLENL-IRDVLADLITHNTTSRVGERINAALATLACHAALRAPHYLTIEEMEALLREMEK 544
Query: 1344 TSLCFQCAHGRPT 1356
T C HGRPT
Sbjct: 545 TEHGGLCNHGRPT 557
Score = 54 (24.1 bits), Expect = 7.0e-29, Sum P(4) = 7.0e-29
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
L ++D HAA ERI E+++ K L+ G ++ L
Sbjct: 404 LVIVDMHAAHERILYEKMK-KQLAEVGLAMQSL 435
>UNIPROTKB|Q74BP0 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
OMA:FLFINNR ProtClustDB:PRK00095 RefSeq:NP_953050.1
ProteinModelPortal:Q74BP0 GeneID:2688110 KEGG:gsu:GSU2001
PATRIC:22026863 BioCyc:GSUL243231:GH27-2035-MONOMER Uniprot:Q74BP0
Length = 606
Score = 298 (110.0 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 86/265 (32%), Positives = 131/265 (49%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LPE + N + +G V+ VV+ELV N++DAG ++ V + G +++ DDG G
Sbjct: 5 IRILPEILTNKIAAGEVVERPASVVKELVENALDAGCGEIIVEIEGGGRRLIRITDDGCG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+SR+ ++ ERHA TSK+ A DD + T GFRGEAL S++ VS + T+ G
Sbjct: 65 MSREDALMALERHA-TSKI---ATDDDLFSLATLGFRGEALPSVASVSRFTLATRERGSI 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G +G K + + GT V R+LF+N P R K+M+S + H V V
Sbjct: 121 EGTEIYAEGGKIREVKACGMAE--GTVVSVRNLFFNTPARLKFMKSVETEGGH-VADLVT 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEIS 242
R+AL P+V F + S+ + L G S L V+ + ++
Sbjct: 178 RLALSRPEVRFTCV---SDGKTLFRALDGTLLDRVAALLGKTVASALHPVDLATEGVRVT 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYV 267
G ++ P S S + Y YIN R++
Sbjct: 235 GLVARPDVSRSAASHLYTYINGRFI 259
Score = 84 (34.6 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 1169 VLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSG--EGKSVAY-----LDAE 1221
V+ Q + +I G L +IDQHAA ER+ E L+ + +G EG+ + + L
Sbjct: 420 VIGQYNASYILCQDGSDLVIIDQHAAHERVAFERLKTQFAAGRVEGQGLLFPETVELSHR 479
Query: 1222 QELVLPEIGYQLLQNFAEQIKDWG---WI 1247
+ V+ E G +L ++D+G WI
Sbjct: 480 ESAVVREHGGEL-GRLGFDLEDFGGTTWI 507
Score = 68 (29.0 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 19/83 (22%), Positives = 33/83 (39%)
Query: 1290 LLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQ 1349
L + L++L S + +V +L AC + L E + + T
Sbjct: 524 LRDTLEELQSLGASRSIADAVEDILTRVACHSVVRGEHPLTTGEIEALFAHMDATDFSTN 583
Query: 1350 CAHGRPTT--VPLVNLEALHKQI 1370
C HGRP + L +E + K++
Sbjct: 584 CPHGRPVLQRLTLGEVEKMFKRV 606
>TIGR_CMR|GSU_2001 [details] [associations]
symbol:GSU_2001 "DNA mismatch repair protein MutL"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
OMA:FLFINNR ProtClustDB:PRK00095 RefSeq:NP_953050.1
ProteinModelPortal:Q74BP0 GeneID:2688110 KEGG:gsu:GSU2001
PATRIC:22026863 BioCyc:GSUL243231:GH27-2035-MONOMER Uniprot:Q74BP0
Length = 606
Score = 298 (110.0 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 86/265 (32%), Positives = 131/265 (49%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LPE + N + +G V+ VV+ELV N++DAG ++ V + G +++ DDG G
Sbjct: 5 IRILPEILTNKIAAGEVVERPASVVKELVENALDAGCGEIIVEIEGGGRRLIRITDDGCG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+SR+ ++ ERHA TSK+ A DD + T GFRGEAL S++ VS + T+ G
Sbjct: 65 MSREDALMALERHA-TSKI---ATDDDLFSLATLGFRGEALPSVASVSRFTLATRERGSI 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G +G K + + GT V R+LF+N P R K+M+S + H V V
Sbjct: 121 EGTEIYAEGGKIREVKACGMAE--GTVVSVRNLFFNTPARLKFMKSVETEGGH-VADLVT 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEIS 242
R+AL P+V F + S+ + L G S L V+ + ++
Sbjct: 178 RLALSRPEVRFTCV---SDGKTLFRALDGTLLDRVAALLGKTVASALHPVDLATEGVRVT 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYV 267
G ++ P S S + Y YIN R++
Sbjct: 235 GLVARPDVSRSAASHLYTYINGRFI 259
Score = 84 (34.6 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 1169 VLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSG--EGKSVAY-----LDAE 1221
V+ Q + +I G L +IDQHAA ER+ E L+ + +G EG+ + + L
Sbjct: 420 VIGQYNASYILCQDGSDLVIIDQHAAHERVAFERLKTQFAAGRVEGQGLLFPETVELSHR 479
Query: 1222 QELVLPEIGYQLLQNFAEQIKDWG---WI 1247
+ V+ E G +L ++D+G WI
Sbjct: 480 ESAVVREHGGEL-GRLGFDLEDFGGTTWI 507
Score = 68 (29.0 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 19/83 (22%), Positives = 33/83 (39%)
Query: 1290 LLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQ 1349
L + L++L S + +V +L AC + L E + + T
Sbjct: 524 LRDTLEELQSLGASRSIADAVEDILTRVACHSVVRGEHPLTTGEIEALFAHMDATDFSTN 583
Query: 1350 CAHGRPTT--VPLVNLEALHKQI 1370
C HGRP + L +E + K++
Sbjct: 584 CPHGRPVLQRLTLGEVEKMFKRV 606
>TAIR|locus:2133274 [details] [associations]
symbol:PMS1 "POSTMEIOTIC SEGREGATION 1" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IC] [GO:0006200 "ATP catabolic
process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=ISS;IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA;IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0006310 "DNA recombination"
evidence=IMP] [GO:0009555 "pollen development" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0048316 "seed
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent
DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007140 "male meiosis"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009691
"cytokinin biosynthetic process" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0010431
"seed maturation" evidence=RCA] [GO:0010564 "regulation of cell
cycle process" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0031047 "gene
silencing by RNA" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP002687 GO:GO:0009555 GO:GO:0016887 GO:GO:0048316
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
HSSP:P54278 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
ProtClustDB:CLSN2689293 EMBL:AY047228 IPI:IPI00544288
RefSeq:NP_567236.1 UniGene:At.26416 ProteinModelPortal:Q941I6
SMR:Q941I6 STRING:Q941I6 PRIDE:Q941I6 EnsemblPlants:AT4G02460.1
GeneID:827997 KEGG:ath:AT4G02460 TAIR:At4g02460 InParanoid:Q941I6
PhylomeDB:Q941I6 Genevestigator:Q941I6 Uniprot:Q941I6
Length = 923
Score = 257 (95.5 bits), Expect = 3.6e-28, Sum P(3) = 3.6e-28
Identities = 99/350 (28%), Positives = 149/350 (42%)
Query: 12 RNTVR---SGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSGISRDG 67
RN + SG V+ DL+ V+ELV NS+DAGAT + + + Y +V+D+G GIS
Sbjct: 22 RNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQVIDNGCGISPTN 81
Query: 68 LVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRK 127
+L +H TSKL D D + T+GFRGEAL+S+ + L + T+ P
Sbjct: 82 FKVLALKHH-TSKL---EDFTDLLNLTTYGFRGEALSSLCALGNLTVETRTKNEPVATLL 137
Query: 128 VMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALV 187
S L R+ +GTTV R LF N PVR K + + +K + + AL+
Sbjct: 138 TFDHSGLLTAEKKTARQ-IGTTVTVRKLFSNLPVRSKEFKRNIRKEYGKLVSLLNAYALI 196
Query: 188 HPKVSFKFIDMESEDE---LLCTCXXXXXXXXXXXXFGIEDFSFLDEVN-ANDGALEISG 243
V F + ++ +L T FGI F+ L V+ + G
Sbjct: 197 AKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITVFGISTFTSLQPVSICVSEDCRVEG 256
Query: 244 YISSPYDSI--SVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
++S P ++ QY +IN R V + KL+N L K +
Sbjct: 257 FLSKPGQGTGRNLADRQYFFINGRPVDMPKVSKLVNELY------------------KDT 298
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
S+ P +L+ P DL P K V F D V+ + + +
Sbjct: 299 SSRKYPVTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIY 348
Score = 158 (60.7 bits), Expect = 3.6e-28, Sum P(3) = 3.6e-28
Identities = 59/203 (29%), Positives = 90/203 (44%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
+VL Q + FI L ++DQHAADE+ E L + + + L+ E + P
Sbjct: 706 QVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHLARSTVLNQQPLLQPLNLE---LSP 762
Query: 1228 EIGYQLLQNFAEQIKDWGWIC--NIHTQGSRSFNKNLNLLQRQIT--VITLLAVPCIFGV 1283
E +L + + I++ G++ N + F + IT V L + G
Sbjct: 763 EEEVTVLMHM-DIIRENGFLLEENPSAPPGKHFRLRAIPYSKNITFGVEDLKDLISTLGD 821
Query: 1284 NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQ 1343
N + + + + TD S P V +L S+ACR ++M GD L +E IVE L
Sbjct: 822 NHGECSVASSYKT-SKTD--SICPSRVRAMLASRACRSSVMIGDPLRKNEMQKIVEHLAD 878
Query: 1344 TSLCFQCAHGRPTTVPLVNLEAL 1366
+ C HGRPT LV+L L
Sbjct: 879 LESPWNCPHGRPTMRHLVDLTTL 901
Score = 44 (20.5 bits), Expect = 3.6e-28, Sum P(3) = 3.6e-28
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 1054 GVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAEN 1091
G C+ NV P + F + + S L E + + N
Sbjct: 315 GACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSN 352
>TIGR_CMR|CHY_1396 [details] [associations]
symbol:CHY_1396 "DNA mismatch repair protein HexB"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 OMA:IRNGTPM HOGENOM:HOG000256552
RefSeq:YP_360228.1 ProteinModelPortal:Q3ACA6 STRING:Q3ACA6
GeneID:3727331 KEGG:chy:CHY_1396 PATRIC:21275923
BioCyc:CHYD246194:GJCN-1395-MONOMER Uniprot:Q3ACA6
Length = 578
Score = 260 (96.6 bits), Expect = 9.5e-28, Sum P(4) = 9.5e-28
Identities = 86/280 (30%), Positives = 136/280 (48%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RLP+ V + +G V+ VV+ELV NS+DA A + VY+ + V DD
Sbjct: 1 MPKIKRLPDEVIKKIAAGEVVERPYSVVKELVENSLDAKAQNINVYIEEGGLGKIVVEDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + L RH TSK+ A DD + +FGFRGEAL SI+ VS + I ++
Sbjct: 61 GIGIPPEELPDALLRHT-TSKI---ASFDDLYYLESFGFRGEALYSIAAVSKISIKSRVR 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G NGY + + + L + GT V DLF+N P R+K+++S + +++
Sbjct: 117 GENNGYELIAHAGEVINL--TEVGMAYGTVVTVSDLFFNTPARKKFLKSGQTEA-GLIRQ 173
Query: 180 CVLRIALVHPKVSFK-FIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLD-EVNANDG 237
+ ++A+++P V F FID + ++ + +G+E + L E +G
Sbjct: 174 FIEKMAILYPGVKFSLFIDGK---KIYSSAGIQEQLGLLARFWGLEKGNLLMLEEKLGEG 230
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLN 277
I G I+ P + Q +N R V G + K ++
Sbjct: 231 FF-IKGGIALPPAGKPHRKLQVFAVNKRLVKSGILTKAID 269
Score = 105 (42.0 bits), Expect = 9.5e-28, Sum P(4) = 9.5e-28
Identities = 27/86 (31%), Positives = 48/86 (55%)
Query: 1284 NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQ 1343
N+++V L E+L ++ + + L++ AC+ A+ FG+ L SE +V+EL +
Sbjct: 495 NIANV-LEEYLYEIMEQKEQVSFREKALKLF---ACKNAVKFGEKLTYSEMTNLVKELFK 550
Query: 1344 TSLCFQCAHGRPTTVPLVNLEALHKQ 1369
T+ C HGRPT L +L ++K+
Sbjct: 551 TNYPLSCPHGRPTIYEL-SLTEINKK 575
Score = 77 (32.2 bits), Expect = 9.5e-28, Sum P(4) = 9.5e-28
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 1158 SINKSCLEDA--KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKV 1207
S+NK ++ +V+ Q K+I V L +IDQHAA ERI E+ + K+
Sbjct: 385 SLNKDFAKELNFQVIGQFSLKYIIVEKNDKLLIIDQHAAHERILYEKYQTKL 436
Score = 43 (20.2 bits), Expect = 9.5e-28, Sum P(4) = 9.5e-28
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
P L + P + D+ P K V F D + + + IR+
Sbjct: 282 PLVFLEVVVPGTWVDVNVHPQKLEVKFMDEQKIYLDVRTIIRN 324
>UNIPROTKB|A9WJ86 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:324602 "Chloroflexus aurantiacus J-10-fl" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000909 GenomeReviews:CP000909_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 HOGENOM:HOG000256552
OMA:ATMACHA RefSeq:YP_001634752.1 ProteinModelPortal:A9WJ86
STRING:A9WJ86 GeneID:5825934 KEGG:cau:Caur_1133 PATRIC:21413049
ProtClustDB:CLSK975399 BioCyc:CAUR324602:GIXU-1150-MONOMER
Uniprot:A9WJ86
Length = 624
Score = 268 (99.4 bits), Expect = 1.3e-27, Sum P(4) = 1.3e-27
Identities = 108/358 (30%), Positives = 171/358 (47%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I L E + + +G V+ VV+EL+ N++DAGA ++ + V G ++V DDG G
Sbjct: 3 IRLLDETIAAQIAAGEVVERPASVVKELLENAIDAGAQRIVIEVRGGGLREIRVQDDGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I D + L RHA TSKL DD I T GFRGEAL SI+ V+ + I++
Sbjct: 63 IPADEIELAFARHA-TSKL---QSADDLWAIRTLGFRGEALPSIASVAQVICISRVADAE 118
Query: 123 NGYRKVMKGSKC---LYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + G + L G VGTT+ R+LFYN PVRR+Y++S + ++
Sbjct: 119 LGVELRIAGGEVQSRLPCGCP-----VGTTITVRNLFYNTPVRREYLRSEATET-GAISA 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGAL 239
V + AL +P+VSF + ++ L T +G+E L V A G
Sbjct: 173 IVQQYALAYPEVSFSLL-IDGRMALQ-TSGDGDLRTVVVELYGLEVGRALLPVQAEAGVD 230
Query: 240 E----ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
E ++G IS P + S + + ++ N R + P LAA + +++ +
Sbjct: 231 ETWVAVNGLISPPELTRSSRNYLSLFANRRAL--QP----RGALAAVVE--NAY--HTML 280
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+KG+ P +L++R + D+ P K+ V F+ V + + RAIR A ++
Sbjct: 281 MKGR------FPIAILDVRVHPAAIDVNVHPTKSEVKFRYAAHVHSVLGRAIRDALLR 332
Score = 105 (42.0 bits), Expect = 1.3e-27, Sum P(4) = 1.3e-27
Identities = 30/86 (34%), Positives = 45/86 (52%)
Query: 1162 SCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAE 1221
S L +V+ QV +I A + +IDQHAA ERI E+L ++ +S L +
Sbjct: 432 SALPPLRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQYAQHAVESQQLLIPQ 491
Query: 1222 QELVLPEIGYQLLQNFAEQIKDWGWI 1247
V PE LL N AE++ +WG++
Sbjct: 492 AVEVSPEASALLLGN-AERLAEWGFV 516
Score = 74 (31.1 bits), Expect = 1.3e-27, Sum P(4) = 1.3e-27
Identities = 27/105 (25%), Positives = 46/105 (43%)
Query: 1270 TVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKACRGAIMFGD 1327
T + + A+P + + E ++LA GS P R +L + AC ++ G
Sbjct: 522 TGVLVRAIPATLPTDELTQAIHEIAEKLAGRGGSD---PLEWREAMLITLACHTSVRAGQ 578
Query: 1328 SLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQ 1372
L E ++ +L+Q C HGRPT + L+ L +Q +
Sbjct: 579 PLSHEEMRQLLRQLEQCVSPRTCPHGRPTMI-LMTPAQLERQFGR 622
Score = 39 (18.8 bits), Expect = 1.3e-27, Sum P(4) = 1.3e-27
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 541 PIVPWKIDRHAWTIESSRFQYHQSSPHLYSSPL 573
P W + AW E SR+ + L ++PL
Sbjct: 363 PSSGWSVGASAWDRERSRWDVGSPATAL-NTPL 394
>DICTYBASE|DDB_G0283981 [details] [associations]
symbol:pms1 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0032389 "MutLalpha
complex" evidence=IEA;IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;ISS;IBA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0016887 "ATPase
activity" evidence=ISS;IBA] [GO:0006200 "ATP catabolic process"
evidence=ISS;IBA] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032300
"mismatch repair complex" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 dictyBase:DDB_G0283981 Prosite:PS00058 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 EMBL:AAFI02000058 eggNOG:COG0323 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 RefSeq:XP_638844.1
ProteinModelPortal:Q54QA0 STRING:Q54QA0 EnsemblProtists:DDB0232417
GeneID:8624368 KEGG:ddi:DDB_G0283981 KO:K10858 OMA:TINECED
ProtClustDB:CLSZ2846737 Uniprot:Q54QA0
Length = 1022
Score = 242 (90.2 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 73/238 (30%), Positives = 112/238 (47%)
Query: 13 NTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLL 71
N + SG V+FDL+ V+EL+ NS+DAGAT V + + +++V+D+GSG+ V L
Sbjct: 11 NNICSGQVIFDLSIAVKELIENSIDAGATTVEIRLKEYGEEFIEVIDNGSGVEPSNFVAL 70
Query: 72 GERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKG 131
+H TSKL +D+ I T+GFRGEAL+S+ +S I T+ + R V
Sbjct: 71 TMKHC-TSKLESFSDL---LSIETYGFRGEALSSLCSLSNCIITTRTKNQVTAQRLVFDK 126
Query: 132 SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKV 191
+ R +VGTTV +LF PVR + + + KK + + AL+
Sbjct: 127 EGKIQTQTPVAR-EVGTTVQLSNLFKGLPVRYQEFKRNIKKEYAKLLTILQAYALISTNT 185
Query: 192 SFKFIDMESEDELLC---TCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEISGYIS 246
+ + C T FG + LDE A+D +++G IS
Sbjct: 186 RITCYNQAGKSPRSCVLSTTSGSTIRDNLINVFGTKMSQSLDEFTASDSLFKVNGLIS 243
Score = 149 (57.5 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 63/221 (28%), Positives = 94/221 (42%)
Query: 1150 TGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLS 1209
T E + K + V+ Q + FI G L +IDQHAADE+ E +LS
Sbjct: 797 TAEEELTKFFKKEYFKQMIVIGQFNLGFIIAKLGNDLFIIDQHAADEKYNFE-----ILS 851
Query: 1210 GEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI 1269
KSV Q L+ P+ L + + ++ I N+ F ++
Sbjct: 852 ---KSVESSINSQPLLKPDT----LSDLTSE-EELIIIENVDLFKKNGFKFIIDHDAPTR 903
Query: 1270 TVITLLAVPCIFGVNLSDVDLLEFLQQLADTD--GSSTTPPSVLRVLNSKACRGAIMFGD 1327
I L A P I G + D+ E++ + ++ GS P + +L SKACR +IM G
Sbjct: 904 FKIKLSAFPIIHGQSFGIKDIYEWIFMIKESSIPGSVNKIPRLNSLLASKACRKSIMVGT 963
Query: 1328 SLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHK 1368
+L E ++ L + C HGRPT LV+L K
Sbjct: 964 TLTHKEMKDVLNNLSTLDNPWCCPHGRPTMRHLVDLSIKDK 1004
Score = 65 (27.9 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 28/134 (20%), Positives = 53/134 (39%)
Query: 233 NANDGALEISGYISSPYDSISVKAFQYVYINS-RYVCKGPIHKLLNHLAASFDCSDSWKA 291
N++ + + S +SS S S + I S C +N + F+ S K
Sbjct: 257 NSSSSSSQSSSQLSSSSSSSSSSQSSQLSIGSLSRSCADRQFFFVN--SRPFEHSKLAKE 314
Query: 292 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
N + + + P + N+ P + YD+ P K + + + +L I +++ W
Sbjct: 315 INSLYQSFHKRG-SYPVVIFNIEMPTNNYDVNVTPDKRTIFIQKEQQLLLLITDGLKTMW 373
Query: 352 MKKIAHDSFDVDML 365
+ A FD + L
Sbjct: 374 --ETAQSVFDTNQL 385
>UNIPROTKB|Q8A120 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:226186 "Bacteroides thetaiotaomicron VPI-5482" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE015928 GenomeReviews:AE015928_GR
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
RefSeq:NP_812762.1 ProteinModelPortal:Q8A120 GeneID:1072957
KEGG:bth:BT_3851 PATRIC:21062728 OMA:EEFGNNS ProtClustDB:CLSK823666
BioCyc:BTHE226186:GJXV-3925-MONOMER Uniprot:Q8A120
Length = 640
Score = 322 (118.4 bits), Expect = 1.9e-27, Sum P(4) = 1.9e-27
Identities = 92/273 (33%), Positives = 142/273 (52%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN--CYVKVVDDGS 61
I+ LP++V N + +G V+ V++ELV N++DA A + V V C ++++DDG
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTC-IQIIDDGK 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 64 GMSETDARLSFERHA-TSKIREAADL---FALRTMGFRGEALASIAAVAQVELKTRLESE 119
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
G + V+ GSK K G+ ++LF+N P RRK+++++ + L ++
Sbjct: 120 ELGTKLVIAGSKVESQEAVSCSK--GSNFSVKNLFFNVPARRKFLKANSTE-LSNILAEF 176
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEI 241
RIALVHP+V+F +SE L FG + L + N ++I
Sbjct: 177 ERIALVHPEVAFSLYSNDSE---LFNLPVSPLRQRILAIFGKKLNQQLLNIEVNTTMVKI 233
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHK 274
SGYI+ P + A QY ++N RY+ HK
Sbjct: 234 SGYIAKPETARKKGAHQYFFVNGRYMRHPYFHK 266
Score = 67 (28.6 bits), Expect = 1.9e-27, Sum P(4) = 1.9e-27
Identities = 26/100 (26%), Positives = 42/100 (42%)
Query: 1160 NKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLD 1219
N+S +E + Q +FI L +IDQH A R+ + ++ +G S L
Sbjct: 448 NESVIEKGNLHLQFKGRFILTSVKSGLMLIDQHRAHIRVLFDRYMVQIKQKQGVSQGVLF 507
Query: 1220 AEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFN 1259
E L LP +LQ + + G+ + GS + N
Sbjct: 508 PEI-LQLPASEAAVLQGIMDDLSAVGFDLSDLGGGSYAIN 546
Score = 53 (23.7 bits), Expect = 1.9e-27, Sum P(4) = 1.9e-27
Identities = 12/64 (18%), Positives = 29/64 (45%)
Query: 308 AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVDMLED 367
+Y + + D+ P KT + F++ + + + +++ + K A S D D +
Sbjct: 283 SYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGKFSAIPSIDFDTEDM 342
Query: 368 AELP 371
++P
Sbjct: 343 PDIP 346
Score = 37 (18.1 bits), Expect = 1.9e-27, Sum P(4) = 1.9e-27
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 444 SFAECLPIVPPKIDH 458
+F + LP PPKI +
Sbjct: 347 AFEQNLPPAPPKIHY 361
>UNIPROTKB|Q22B61 [details] [associations]
symbol:TTHERM_01109940 "DNA mismatch repair protein,
C-terminal domain containing protein" species:312017 "Tetrahymena
thermophila SB210" [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
ProtClustDB:CLSZ2846737 EMBL:GG662565 RefSeq:XP_001030203.2
UniGene:Tth.6164 ProteinModelPortal:Q22B61 EnsemblProtists:EAR82540
GeneID:7840245 KEGG:tet:TTHERM_01109940 Uniprot:Q22B61
Length = 946
Score = 232 (86.7 bits), Expect = 2.2e-27, Sum P(3) = 2.2e-27
Identities = 100/345 (28%), Positives = 151/345 (43%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSG 62
I +L ++ + V+ DL V+ELV NS+DAG+TK+ VY+ V+VVD+GSG
Sbjct: 2 IKKLDQSSILNICVNQVIIDLATCVKELVENSLDAGSTKIEVYLKEYGKEGVEVVDNGSG 61
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
IS L + ++ ATSKL D++ + TFGFRGEAL +IS +S L I TK
Sbjct: 62 ISSQNLEQIAQK-GATSKLRQFQDLES---LDTFGFRGEALNAISVLSQLTITTKTDSDE 117
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
YR + R+ GTT+ DLF N PVR++ + + + +
Sbjct: 118 MAYRYQFNQDNTIKSKTLVPRER-GTTISLTDLFGNIPVRKQEFNKNIISQYNKLVNMIT 176
Query: 183 RIALVHPKVSFKFIDMESED--ELLCTCXX--XXXXXXXXXXFG--IED------FSFLD 230
A++ I+ S+ E++ F I D F F +
Sbjct: 177 EYAIISVNCQICLINQSSKKGREMILNSGSPMKNMLQKTAQVFSKKISDMLVDLKFDFGE 236
Query: 231 EVNANDGALEISGYISSPYDSISV-KAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSW 289
E + +G + S DS S+ K Y+++N+R V P K+ N + F SD +
Sbjct: 237 ECSVIEGYILNRQTSGSVQDSKSIQKNMSYLFVNTRPV--NPFKKM-NSI---F--SDIY 288
Query: 290 KANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFK 334
K N S A Y+L+L+ D P K + K
Sbjct: 289 KKYN---------SSARYIYILHLKVKKDAIDFNVSPDKRDIFIK 324
Score = 163 (62.4 bits), Expect = 2.2e-27, Sum P(3) = 2.2e-27
Identities = 83/324 (25%), Positives = 137/324 (42%)
Query: 1072 DFKIESSTILDLEETHKAENFKLSL----CPHAHLGAQAEGTSIISGTKWRNGHPQTTNN 1127
++K E S++ ++E + + K SL H Q E + K +N +
Sbjct: 643 EYKSEDSSLYKMKEEKQTKQLKQSLNQEELVQKHFQIQEEARIL---NKKQNNELMEIDE 699
Query: 1128 NISCD------IHN--QDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIP 1179
I D I + +D I +++ L + D K + +++ Q +K FI
Sbjct: 700 KIDQDQGRAFKIKSKKEDEIEELADDLEEQLKTWESED-FKKDKFVELQIIGQFNKAFII 758
Query: 1180 V--VAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNF 1237
V + +IDQHA+DE+ E L K + +G+ + E L + E +L+N
Sbjct: 759 AYWVEKDQIFLIDQHASDEKTNYERLL-KENNFQGQKLVK-PIELSLTIQEA--DILENN 814
Query: 1238 AEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQL 1297
E K G+ I S N NL Q+ + N++D D E Q +
Sbjct: 815 REIFKKNGFQFQIKYDES---NGEPNLYINQLPSSKHIQF------NINDFD--EIFQNI 863
Query: 1298 --ADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1355
+TD + P + R+L SKACR +IM G +L S I+ L + + C HGRP
Sbjct: 864 NNEETDIETFRPKKIQRILASKACRSSIMIGTALNKSSMKQILLNLSKLQSPWNCPHGRP 923
Query: 1356 TTVPLVNLEALHKQIAQLNNSSEL 1379
T V + L +Q+ Q+ + +L
Sbjct: 924 TMVKTPPMNHLIQQV-QVKKTYDL 946
Score = 58 (25.5 bits), Expect = 2.2e-27, Sum P(3) = 2.2e-27
Identities = 21/88 (23%), Positives = 41/88 (46%)
Query: 898 DTEENYKFDY-DSKLRRSNQEKCTTARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREHS 956
D E+N F Y + KL+ Q K + + +++ + S + F K QE+ + +++ +
Sbjct: 561 DEEQNQDFSYFNDKLKLYKQSK-QQSENNSKYQVKEYSFDMFKKSKQENSSKGQDNQKIN 619
Query: 957 DVPFDKTDWLCSVLSSIEYDNPETQRYK 984
+ + D C S Y N + + YK
Sbjct: 620 NEDEENCDDQCCTQSQ-NYSNSQNE-YK 645
Score = 49 (22.3 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 26/127 (20%), Positives = 59/127 (46%)
Query: 835 LSDSIEPVGNSVSDYKALNSVWCSKISDPFP-QGASWNDGHF-IYNNALEGHSILGEGTS 892
++D IE + N S+ KA S + S+ F + ++N +F I + + + T
Sbjct: 463 VNDEIEDLSNFSSNSKA-QSKQKNDNSEYFKSRNQTFNSDYFSIAQQRKKAYEEQLQNTR 521
Query: 893 CGQLADTEENYKFDYDSKLRRSNQEKCTTARSGLR--FEYYDNSSEDFCKYLQEHDPCNK 950
+L +++E Y+ +Y K + S+++ ++ + + ++DF Y + K
Sbjct: 522 -EELQNSKEEYQENYQKKQQTSSKDHNNQNKTDSKQLINEDEEQNQDF-SYFNDKLKLYK 579
Query: 951 FSREHSD 957
S++ S+
Sbjct: 580 QSKQQSE 586
Score = 45 (20.9 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 25/94 (26%), Positives = 39/94 (41%)
Query: 574 ENLSKEGDHLFREECERITFGEFEKHTPELKEENSKRELVS---QPKYSSKLLDCPFAEC 630
+N S + E+ E EK T +LK+ ++ ELV Q + +++L+
Sbjct: 635 QNYSNSQNEYKSEDSSLYKMKE-EKQTKQLKQSLNQEELVQKHFQIQEEARILNKKQNNE 693
Query: 631 LSPVLRKIDLHGWTSGNRFSLKGSYFLETCFLAD 664
L + KID G F +K E LAD
Sbjct: 694 LMEIDEKIDQD---QGRAFKIKSKKEDEIEELAD 724
>TIGR_CMR|DET_1195 [details] [associations]
symbol:DET_1195 "DNA mismatch repair protein, MutL/HexB
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 HOGENOM:HOG000256552 OMA:FLFINNR
RefSeq:YP_181908.1 ProteinModelPortal:Q3Z791 STRING:Q3Z791
GeneID:3229520 KEGG:det:DET1195 PATRIC:21609425
ProtClustDB:CLSK935583 BioCyc:DETH243164:GJNF-1196-MONOMER
Uniprot:Q3Z791
Length = 566
Score = 253 (94.1 bits), Expect = 1.6e-26, Sum P(4) = 1.6e-26
Identities = 87/276 (31%), Positives = 138/276 (50%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I L +A + +G V+ + VV+EL+ NS+DAGA +V V + Y++V DDG G
Sbjct: 3 IKLLDKATIARIAAGEVIERPSSVVKELLENSLDAGAKRVDVVIREGGIGYIEVSDDGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++L ERHA TSKL + +D I + GFRGEAL SI+ V+ LE++T A
Sbjct: 63 IVFSEVLLAFERHA-TSKL---SSFEDIYAISSLGFRGEALPSIAAVADLEMLTAARTEE 118
Query: 123 NG-YRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+G Y + G + + + GTT+ LF P R K++++ P+ V + V
Sbjct: 119 SGTYLSLSGGEMVKHTRM---ARSPGTTIKLTRLFSRVPARLKFLKT-PQHEASKVSEVV 174
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFS-FLD-EVNA-NDGA 238
L AL +P+V F + ++ + L T +G + S LD E ++ A
Sbjct: 175 LSYALAYPEVKFT-LSIDGRNTLN-TPGNGKLRDAVLEIYGNDVASKMLDLETDSYRSSA 232
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHK 274
+ ISG +S P S S + + ++N R + + K
Sbjct: 233 INISGLVSPPEISRSNRNSLHFFVNRRLIQSRALQK 268
Score = 75 (31.5 bits), Expect = 1.6e-26, Sum P(4) = 1.6e-26
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 1152 EFFIP--DSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLS 1209
++F P S S L +++ Q+ ++ L +IDQHAA ERIR EE+ + S
Sbjct: 367 QYFSPVIQSAKTSVLPLLRLVGQIGGLYLLAEGPDGLYIIDQHAAHERIRYEEIASQTPS 426
Query: 1210 GEGKSVAYLD 1219
E + LD
Sbjct: 427 -ENARQSLLD 435
Score = 74 (31.1 bits), Expect = 1.6e-26, Sum P(4) = 1.6e-26
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 1301 DGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVP 1359
D P + R+ AC A+ G L +E ++ +L++T++ C HGRPT V
Sbjct: 494 DNPKDAPAEIKERLQRLMACHTAVRAGQVLNEAEMRELLLKLEKTAVPGHCPHGRPTIVK 553
Query: 1360 L 1360
+
Sbjct: 554 I 554
Score = 71 (30.1 bits), Expect = 1.6e-26, Sum P(4) = 1.6e-26
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P ++N+ +L D+ P K V F D V ++RA+RS ++K
Sbjct: 284 PLGVINIWLDGALVDVNIHPTKAEVKFSDESAVFTAVQRAVRSVLVEK 331
>UNIPROTKB|P49850 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:AL009126 GenomeReviews:AL009126_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:U27343
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 HOGENOM:HOG000256552
OMA:FLFINNR ProtClustDB:PRK00095 PIR:A69663 RefSeq:NP_389587.1
PDB:3GAB PDB:3KDG PDB:3KDK PDBsum:3GAB PDBsum:3KDG PDBsum:3KDK
ProteinModelPortal:P49850 SMR:P49850 IntAct:P49850
EnsemblBacteria:EBBACT00000001153 GeneID:939455 KEGG:bsu:BSU17050
PATRIC:18975217 GenoList:BSU17050 BioCyc:BSUB:BSU17050-MONOMER
EvolutionaryTrace:P49850 Uniprot:P49850
Length = 627
Score = 281 (104.0 bits), Expect = 1.7e-25, Sum P(4) = 1.7e-25
Identities = 83/278 (29%), Positives = 137/278 (49%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M + +L + + N + +G V+ VV+ELV N++DA +T + + + ++V+D+
Sbjct: 1 MAKVIQLSDELSNKIAAGEVVERPASVVKELVENAIDADSTVIEIDIEEAGLASIRVLDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ + RHA TSK+ D +D + T GFRGEAL SI+ VS LEI T
Sbjct: 61 GEGMENEDCKRAFRRHA-TSKI---KDENDLFRVRTLGFRGEALPSIASVSHLEITTST- 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G + V++G + RK GT +V +LF+N P R KYM++ + L ++
Sbjct: 116 GEGAGTKLVLQGGNIISESRSSSRK--GTEIVVSNLFFNTPARLKYMKTVHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGAL 239
V RIAL HP+VS + LL T +G + ++ +
Sbjct: 173 VVNRIALAHPEVSIRL--RHHGKNLLQTNGNGDVRHVLAAIYGTAVAKKMLPLHVSSLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLN 277
E+ GYI+ P + + + + +N RY+ P+ K ++
Sbjct: 231 EVKGYIALPEITRASRNYMSSVVNGRYIKNFPLVKAVH 268
Score = 76 (31.8 bits), Expect = 1.7e-25, Sum P(4) = 1.7e-25
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 1318 ACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV--PLVNLEALHKQI 1370
+C+G+I L E ++++L+ TS F C HGRP + +E + K++
Sbjct: 572 SCKGSIKANRHLRNDEIKALLDDLRSTSDPFTCPHGRPIIIHHSTYEMEKMFKRV 626
Score = 70 (29.7 bits), Expect = 1.7e-25, Sum P(4) = 1.7e-25
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAE-QELVLP 1227
L +IDQHAA ERI+ E R KV GE ++ E QE+++P
Sbjct: 458 LYIIDQHAAQERIKYEYFREKV--GE------VEPEVQEMIVP 492
Score = 37 (18.1 bits), Expect = 1.7e-25, Sum P(4) = 1.7e-25
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1060 VKPSSEEEDFRPDFKIESSTILDLEET 1086
VK + E+ P + ++ I+D E+T
Sbjct: 380 VKEPVDAEEKLPPLQFDAPPIVDQEQT 406
>UNIPROTKB|Q5B515 [details] [associations]
symbol:AN4365.2 "DNA mismatch repair protein (Mlh3),
putative (AFU_orthologue; AFUA_4G06490)" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014790 Pfam:PF08676 SMART:SM00387 SMART:SM00853
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:BN001303 GO:GO:0030983
GO:GO:0007131 GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323
GO:GO:0005712 GO:GO:0032390 PANTHER:PTHR10073 KO:K08739
OrthoDB:EOG46X2HJ EMBL:AACD01000075 RefSeq:XP_661969.1
ProteinModelPortal:Q5B515 EnsemblFungi:CADANIAT00006093
GeneID:2872164 KEGG:ani:AN4365.2 HOGENOM:HOG000188023 OMA:HAADERC
Uniprot:Q5B515
Length = 870
Score = 238 (88.8 bits), Expect = 8.8e-25, Sum P(2) = 8.8e-25
Identities = 72/220 (32%), Positives = 106/220 (48%)
Query: 1159 INKSCLEDAKVLQQVDKKFI----PVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS 1214
++K L+ A+V+ QVD+KFI P TL +IDQHAADER R+E L +G
Sbjct: 620 LHKCDLQTARVIGQVDQKFILVEIPDANASTLVLIDQHAADERCRIERLYSGFFNGS--E 677
Query: 1215 VAYLDAEQELV-LPEIGYQLLQNFAEQIKDWGWICNI-HTQGSRSFNKNLNLLQRQITVI 1272
V ++ E ++ +P + L + AE + WG I H S + +++ L I
Sbjct: 678 VQTIEVEPIVIAIPPVETSLFRQQAEFFQSWGIEYMIGHASESGKASISVSALPTLIAER 737
Query: 1273 TLLAVPCIFGVNLSDV-DLLEFLQQLADTDGSSTT----------PPSVLRVLNSKACRG 1321
+ G+ +++ E Q + G+ + P + +LNS+ACR
Sbjct: 738 CRAEPEQLIGILRAEIWKRTEERPQTFNAKGTDSAEDWVRQIAGCPQGIRDMLNSRACRT 797
Query: 1322 AIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV 1361
AIMF D L EC +V L FQCAHGRP+ VPLV
Sbjct: 798 AIMFNDVLSVDECRTLVSRLASCVFPFQCAHGRPSMVPLV 837
Score = 139 (54.0 bits), Expect = 8.8e-25, Sum P(2) = 8.8e-25
Identities = 58/168 (34%), Positives = 76/168 (45%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LP+ V +RS T++ L VV ELV N++DA A +FV V V DDG GI
Sbjct: 7 IQPLPQDVAAKIRSSTLITHLNGVVLELVKNALDANAQCIFVTVDYRRGGCVVEDDGEGI 66
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 123
+ E K H + ++ ++G +G LAS+S +SLL I T H R
Sbjct: 67 APAEF----EPGGGLGKAHHTSRFGTSS---SYGRKGCFLASLSALSLLTI-TSHHYRHA 118
Query: 124 GYRKVM----KGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRK 164
VM L+ R D GT V + DLF N PVR K
Sbjct: 119 STNTVMFHHAHPIARLFPAPRHHRLKFSDHGTRVTANDLFGNMPVRVK 166
Score = 39 (18.8 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 647 NRFSLKGSYFLETCFLA 663
+RF SY + CFLA
Sbjct: 84 SRFGTSSSYGRKGCFLA 100
Score = 38 (18.4 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 179 KCVLRIALVHPKVSFKFIDMESED 202
KC L+ A V +V KFI +E D
Sbjct: 622 KCDLQTARVIGQVDQKFILVEIPD 645
>TIGR_CMR|ECH_0884 [details] [associations]
symbol:ECH_0884 "DNA mismatch repair protein, MutL/HexB
family" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR
ProtClustDB:PRK00095 RefSeq:YP_507679.1 ProteinModelPortal:Q2GFV4
STRING:Q2GFV4 GeneID:3927913 KEGG:ech:ECH_0884 PATRIC:20577170
BioCyc:ECHA205920:GJNR-887-MONOMER Uniprot:Q2GFV4
Length = 673
Score = 248 (92.4 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 79/263 (30%), Positives = 131/263 (49%)
Query: 8 PEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVDDGSGISR 65
P + N + +G V+ VV+ELV NS+DA AT + + + G N + V D+G GI +
Sbjct: 8 PRTI-NRIAAGEVIECPASVVKELVENSIDAKATAISITIERGGRNLII-VSDNGIGIKK 65
Query: 66 DGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGY 125
+ + + RHA TSKL D D T + + GFRGE L SI+ V +++++K +
Sbjct: 66 EDMEIAFARHA-TSKL---PD-GDLTKVRSLGFRGEGLTSIAAVGKVKMVSKYRDSDTAW 120
Query: 126 RKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIA 185
V +G + + + GT + RDLF+ P R K++++ +V S+ + ++A
Sbjct: 121 LMVFEGGEKTQ-ELTPDALSCGTYIEVRDLFFATPNRLKFLRTEKAEV-QSIIDMMNKLA 178
Query: 186 LVHPKVSFK-FIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEISGY 244
+V+ V F F+D + + L T G+E VN + +++SGY
Sbjct: 179 MVNHNVMFSLFVDNKQVFKYL-TQQSNIDRLSEIKTLGMEFCKNSLPVNVKEEQIQLSGY 237
Query: 245 ISSPYDSISVKAFQYVYINSRYV 267
I SP S + Y ++NSR V
Sbjct: 238 IGSPTLSRGKSSLIYTFVNSRPV 260
Score = 127 (49.8 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 53/198 (26%), Positives = 93/198 (46%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEG-KSVAYLDAEQELVLPE 1228
L Q+ ++I ++ +IDQHAA ER+ E ++ +V++ EG K L E +
Sbjct: 487 LCQIHSRYIISQTQDSIVIIDQHAAHERLTYEYMK-QVMAKEGIKRQILLIPEIIEMNNH 545
Query: 1229 IGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFG---VNL 1285
+ +LL + E++ G + I G NL+++ R+ VP +FG V
Sbjct: 546 LDLELLVEYKEKLLKLGLL--IEPLG------NLSVIVRE--------VPALFGSFDVKS 589
Query: 1286 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1345
+++++ + ++ DT + + + AC +I G L E I+ ++ T+
Sbjct: 590 LIINIVDSIMEVGDT---LFLDDKIKDICGTIACYSSIRSGRKLKIEEMNAILRNMENTA 646
Query: 1346 LCFQCAHGRPTTVPLVNL 1363
QC HGRPT V L NL
Sbjct: 647 HSGQCNHGRPTYVEL-NL 663
Score = 44 (20.5 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P +L L P D P K+ V F+D + V + AI+
Sbjct: 283 PVVVLYLDIPCDQVDANVHPNKSEVRFQDKKLVYRTVVNAIK 324
Score = 37 (18.1 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 601 PELKEENSKRELVSQPKYSSKLL 623
PE+ E N+ +L +Y KLL
Sbjct: 537 PEIIEMNNHLDLELLVEYKEKLL 559
>UNIPROTKB|E2QZI8 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR014790 Pfam:PF08676 SMART:SM00853
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 PANTHER:PTHR10073 GeneTree:ENSGT00550000074903
EMBL:AAEX03005855 Ensembl:ENSCAFT00000026951 Uniprot:E2QZI8
Length = 467
Score = 206 (77.6 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 71/225 (31%), Positives = 111/225 (49%)
Query: 1182 AGGTLAV-IDQHAADERIRLEEL-----RHKVLSGEGKSV---AYLDAEQELVLPEIGYQ 1232
AGG L V +DQHAA ER+RLE+L + G G+ + + ++ + E +
Sbjct: 227 AGGNLLVLVDQHAAHERVRLEQLITDSYEKQQPQGSGRKKLLSSTVSPPLKIRVTEEQRR 286
Query: 1233 LLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSDVD 1289
LL+ + + ++D G I T S + L ++R+ + P N+ +
Sbjct: 287 LLRCYHKNLEDLGLEILFPDTNDSLVLVGKVPLCFIEREANELRRGRSPVTR--NIVEEF 344
Query: 1290 LLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1348
+ E ++ L T G T P +V +VL S+AC GAI F D L E ++E L L F
Sbjct: 345 IREQVELLQTTGGIQRTLPLTVQKVLASQACHGAIKFNDGLSREESCRLIEALSWCQLPF 404
Query: 1349 QCAHGRPTTVPLVNLEAL--HKQI----AQLNNSSELWHGLHRGE 1387
QCAHGRP+ +PL +++ L KQI A+L ++ WH + E
Sbjct: 405 QCAHGRPSMLPLADIDHLGQEKQIKPNLAKLRKMAQAWHLFGKAE 449
Score = 104 (41.7 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 32/79 (40%), Positives = 41/79 (51%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L+ P K + +VLQQVD KFI + AGG
Sbjct: 171 VDVSSGQAKSLVVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 230
Query: 1186 LAV-IDQHAADERIRLEEL 1203
L V +DQHAA ER+RLE+L
Sbjct: 231 LLVLVDQHAAHERVRLEQL 249
Score = 101 (40.6 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEELV NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IECLSVEVQARLRSGLAICSLGQCVEELVLNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGL 68
D +
Sbjct: 62 GSDDI 66
>UNIPROTKB|Q8F6X4 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:189518 "Leptospira interrogans serovar Lai str. 56601"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 EMBL:AE010300
GenomeReviews:AE010300_GR KO:K03572 HOGENOM:HOG000256552
OMA:FLFINNR RefSeq:NP_711356.2 ProteinModelPortal:Q8F6X4
PaxDb:Q8F6X4 GeneID:1150518 KEGG:lil:LA_1175 PATRIC:22383195
ProtClustDB:CLSK573800 BioCyc:LINT189518:GJBB-947-MONOMER
Uniprot:Q8F6X4
Length = 593
Score = 253 (94.1 bits), Expect = 4.4e-24, Sum P(4) = 4.4e-24
Identities = 87/270 (32%), Positives = 137/270 (50%)
Query: 1 MGTINRL-PEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVV 57
MG I L PE + N + +G V+ VV+EL+ NS+DA AT+V V G + +++
Sbjct: 1 MGKIQELSPELI-NQIAAGEVIESAHSVVKELMENSMDASATQVDVESKDGGLSL-LRIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI + L +RHA TSK+ D D + ++GFRGEALASI+ VS L + +
Sbjct: 59 DNGTGIEPEDLEPALKRHA-TSKI---QDYKDLESVLSYGFRGEALASIASVSRLTLESG 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKD-VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+ ++ K + +E +GT ++ +LF+N PVRRK+++S +
Sbjct: 115 TKEQKTAWKTRSVAGK---ISEKEEIPGFIGTKILVEELFFNTPVRRKFLKSIRSED-KK 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDF-SFLDEVNAN 235
++ V AL V F+ E +L T FG E+F L EV+
Sbjct: 171 IRDRVTTQALAREDVRFRLFQDGKEVFVLPT--RENKKERIIDLFG-ENFRDHLLEVSLE 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSR 265
G ++ +GYIS P S + Q+++IN R
Sbjct: 228 RGGIQATGYISDPDFYKSNRTGQFIFINGR 257
Score = 97 (39.2 bits), Expect = 4.4e-24, Sum P(4) = 4.4e-24
Identities = 29/90 (32%), Positives = 40/90 (44%)
Query: 1272 ITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVL-NSKACRGAIMFGDSLL 1330
I L +P +L+FL + T+G T+ P + ++ ACR AI GD L
Sbjct: 495 IVLREIPAYMEPGQEKEIVLDFLNR---TEGKETSEPELYDLMAKCVACRSAIKKGDQLS 551
Query: 1331 PSECALIVEELKQTSLCFQCAHGRPTTVPL 1360
A I+ L +C HGRPT V L
Sbjct: 552 DPILAEILNRLSYCENPSRCPHGRPTLVKL 581
Score = 64 (27.6 bits), Expect = 4.4e-24, Sum P(4) = 4.4e-24
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 1177 FIPVVAGGTLAVIDQHAADERIRLEELRHKV 1207
FI A +IDQH A ERIR EE+ K+
Sbjct: 417 FILAEAEDGFYIIDQHTAHERIRYEEVLRKL 447
Score = 37 (18.1 bits), Expect = 4.4e-24, Sum P(4) = 4.4e-24
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 676 LNSQRGYEYLQIEPGVS 692
++ Q G+E ++ PGVS
Sbjct: 374 VSKQEGFELDRMGPGVS 390
>ZFIN|ZDB-GENE-030131-686 [details] [associations]
symbol:pms2 "PMS2 postmeiotic segregation increased
2 (S. cerevisiae)" species:7955 "Danio rerio" [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058
ZFIN:ZDB-GENE-030131-686 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GeneTree:ENSGT00530000063289 EMBL:CR932017 IPI:IPI00901265
Ensembl:ENSDART00000111565 Bgee:E7F558 Uniprot:E7F558
Length = 851
Score = 205 (77.2 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 76/265 (28%), Positives = 115/265 (43%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDG 60
G I + + + + SG V+ L V+ELV NS+DAGAT V V + V+V D+G
Sbjct: 10 GAIKAIDKQSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDNGIELVEVSDNG 69
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
G+ L +H TSKL +D+ + TFGFRGEAL+S+ +S L ++T
Sbjct: 70 KGVEEQNYEGLTLKHH-TSKLKEFSDL---IHVETFGFRGEALSSLCALSDLSVVTCHES 125
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
G R V L + R+ GTTV + LF PVR K Q + KK +
Sbjct: 126 AQIGARLVYDHDGRLTQCVPHPRQH-GTTVTLQKLFSTLPVRHKEFQRNIKKEYSKMIFV 184
Query: 181 VLRIALVHPKVSFKFIDMESEDE---LLCTCXXXXXXXXXXXXFGIEDFSFL---DEVNA 234
+ ++ V + + + +LCT FG + L +++
Sbjct: 185 LQSYCIISTGVRITCSNQMGQGKRSTVLCTSGSNSMRDNIGAVFGPKQLQSLIPFRQISP 244
Query: 235 NDGALEISGY--ISSPYDSISVKAF 257
ND E G + P D ++ F
Sbjct: 245 NDSVKEDYGLGGVDVPKDLFNIDGF 269
Score = 171 (65.3 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 57/217 (26%), Positives = 99/217 (45%)
Query: 1150 TGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLS 1209
T E + I+K ++ +++ Q + FI L +IDQHA DE+ E L+ +
Sbjct: 648 TAEDELKKEISKDMFKEMEIIGQFNLGFIITKIKSDLFIIDQHATDEKYNFEMLQQNTVL 707
Query: 1210 GEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI 1269
+G+ L Q L LP I +L E + G+ I +++ ++ R
Sbjct: 708 -KGQR---LIVPQSLHLPAISETVLMENLEIFRKNGFDFLI--------DEDAQVMDR-- 753
Query: 1270 TVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSL 1329
+ L+++P D+ E + L+D+ G P V ++ S+ACR ++M G +L
Sbjct: 754 --VKLVSLPTSKNWTFGPNDIEELIFMLSDSPGIMCRPSRVRQMFASRACRKSVMVGTAL 811
Query: 1330 LPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1366
SE +V + + + C HGRPT L NL+ +
Sbjct: 812 NTSEMKKLVLHMGEIEQPWNCPHGRPTMRHLANLDMI 848
Score = 39 (18.8 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 577 SKEGDHLFREECERITFGEFEKHTPELKEENSK 609
S E + +R +I GE + ELK+E SK
Sbjct: 627 SNEQEPKYRRFRAKINPGENQTAEDELKKEISK 659
Score = 37 (18.1 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 8/41 (19%), Positives = 20/41 (48%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
P LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 316 PFVALNIAVASDCVDVNVTPDKRQILLQEEKLLLAILKSSL 356
>TIGR_CMR|CPS_0323 [details] [associations]
symbol:CPS_0323 "DNA mismatch repair protein MutL"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
RefSeq:YP_267089.1 ProteinModelPortal:Q48A24 SMR:Q48A24
STRING:Q48A24 GeneID:3521200 KEGG:cps:CPS_0323 PATRIC:21464033
HOGENOM:HOG000256551 OMA:RMASTHA BioCyc:CPSY167879:GI48-426-MONOMER
Uniprot:Q48A24
Length = 652
Score = 308 (113.5 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 88/278 (31%), Positives = 141/278 (50%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGS 61
TI LP + N + +G V+ V++EL+ NS+DAGAT + + V +K+ D+G
Sbjct: 2 TIAILPARLANQIAAGEVVERPASVIKELIENSLDAGATSIHIDVDKGGIKKIKITDNGH 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI ++ L L RHA TSK+ L D++ IG+ GFRGEALASIS V+ L + +K +
Sbjct: 62 GIVKEELTLALSRHA-TSKIKSLNDLE---AIGSLGFRGEALASISSVARLTLTSKPQSQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++ V +G + + + I GT++ DLF+N P RRK++++ + H + + V
Sbjct: 118 ATAWQAVAEG-RDMSVNIKPAAHPDGTSIEVLDLFFNTPARRKFLRTEKTEFNH-IDEVV 175
Query: 182 LRIALVHPKVSFKFI-DMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALE 240
RIAL H +VSF + + + G + EV+ +
Sbjct: 176 RRIALAHFEVSFSLTHNGNTVRQYRMASTHAQCIKRVAMVCGPKFIEHAVEVDCPHDNMT 235
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH 278
+SG+++ P S S Y Y+N R + KL+NH
Sbjct: 236 LSGWLAKPSFSRSQNDLCYSYVNGRMMRD----KLINH 269
Score = 49 (22.3 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 19/69 (27%), Positives = 25/69 (36%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVDMLE 366
PA++L L+ H D+ P K V F V FI A +A +
Sbjct: 285 PAFVLFLQLDHREVDVNVHPSKHEVRFHQSRYVHDFIYSVCHKALTSALAGEELFTTADS 344
Query: 367 DAELPLESS 375
D L E S
Sbjct: 345 DLALVPEQS 353
Score = 40 (19.1 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 1343 QTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1373
Q LC+ +GR L+N A+ + A L
Sbjct: 249 QNDLCYSYVNGRMMRDKLIN-HAIRQAYADL 278
Score = 37 (18.1 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 901 ENYKFDYDSKLRRSNQEKCTTARSGLRFEYYDNSSEDFCKYLQEHD 946
+ +K + SK+ SN + T G + + S D Q+H+
Sbjct: 404 QQHKTNAISKIAASNYQALMTPDKGSSAQVQNTSGSDQAS-AQKHE 448
>UNIPROTKB|Q48P04 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:CP000058 GenomeReviews:CP000058_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 ProtClustDB:PRK00095
HOGENOM:HOG000256551 OMA:ATMACHA RefSeq:YP_272865.1
ProteinModelPortal:Q48P04 SMR:Q48P04 STRING:Q48P04 GeneID:3560497
KEGG:psp:PSPPH_0563 PATRIC:19970177 Uniprot:Q48P04
Length = 648
Score = 264 (98.0 bits), Expect = 2.5e-22, Sum P(4) = 2.5e-22
Identities = 81/268 (30%), Positives = 131/268 (48%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I L + N + +G V+ V++EL+ NS+D+GA ++ V V +KV DDG G
Sbjct: 23 IELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGGG 82
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
IS D L L RHA TSK+ D++D + + GFRGEALASIS V+ L + ++
Sbjct: 83 ISSDDLPLALARHA-TSKI---RDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDAD 138
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VGT+V RDLF+N P RRK++++ + H +++ +
Sbjct: 139 QAWQVETEG-RDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDH-LQEVIK 196
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDE---VNANDGAL 239
R+AL V+F + +L I FL++ + L
Sbjct: 197 RMALARFDVAFHL--RHNGKTMLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNGL 254
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYV 267
+ G++ P S S QY ++N R V
Sbjct: 255 HLWGWVGLPTFSRSQADLQYFFVNGRAV 282
Score = 75 (31.5 bits), Expect = 2.5e-22, Sum P(4) = 2.5e-22
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 1292 EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCA 1351
+ L L + S + +L + AC GAI L E ++ +++ T QC
Sbjct: 567 DVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTERSGQCN 626
Query: 1352 HGRPT 1356
HGRPT
Sbjct: 627 HGRPT 631
Score = 57 (25.1 bits), Expect = 2.5e-22, Sum P(4) = 2.5e-22
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPE 1228
L ++D HAA ERI E L+ ++ EG S Q L++PE
Sbjct: 478 LVLVDMHAAHERIMYERLKI-AMANEGLS------GQPLLVPE 513
Score = 40 (19.1 bits), Expect = 2.5e-22, Sum P(4) = 2.5e-22
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P ++L + D+ P K V F+D V F+ + A
Sbjct: 305 PTFVLFFEVDPAAVDVNVHPTKHEVRFRDGRMVHDFLYGTLHRA 348
>UNIPROTKB|P23367 [details] [associations]
symbol:mutL species:83333 "Escherichia coli K-12"
[GO:0006298 "mismatch repair" evidence=IEA;IDA;IMP] [GO:0005524
"ATP binding" evidence=IEA;IDA] [GO:0032300 "mismatch repair
complex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0000018 "regulation of DNA recombination" evidence=IMP]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 EMBL:U14003
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:L19346 EMBL:Z11831
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0000018 eggNOG:COG0323
EMBL:M63655 InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0032300 KO:K03572 ProtClustDB:PRK00095 HOGENOM:HOG000256551
PIR:PH0853 RefSeq:NP_418591.1 RefSeq:YP_492312.1 PDB:1B62 PDB:1B63
PDB:1BKN PDB:1NHH PDB:1NHI PDB:1NHJ PDB:1X9Z PDBsum:1B62
PDBsum:1B63 PDBsum:1BKN PDBsum:1NHH PDBsum:1NHI PDBsum:1NHJ
PDBsum:1X9Z ProteinModelPortal:P23367 SMR:P23367 DIP:DIP-10285N
IntAct:P23367 MINT:MINT-1266937 PRIDE:P23367
EnsemblBacteria:EBESCT00000002603 EnsemblBacteria:EBESCT00000002604
EnsemblBacteria:EBESCT00000002605 EnsemblBacteria:EBESCT00000017847
GeneID:12934482 GeneID:948691 KEGG:ecj:Y75_p4056 KEGG:eco:b4170
PATRIC:32123913 EchoBASE:EB1258 EcoGene:EG11281 OMA:FSHIDEI
BioCyc:EcoCyc:EG11281-MONOMER BioCyc:ECOL316407:JW4128-MONOMER
BioCyc:MetaCyc:EG11281-MONOMER EvolutionaryTrace:P23367
Genevestigator:P23367 Uniprot:P23367
Length = 615
Score = 294 (108.6 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 91/295 (30%), Positives = 152/295 (51%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK++++ + H + + +
Sbjct: 119 EAWQAYAEG-RDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNH-IDEIIR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFG-IEDFSFLDEVNAND---GA 238
RIAL V+ I++ +++ G I +FL++ A + G
Sbjct: 177 RIALARFDVT---INLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGD 233
Query: 239 LEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 292
L + G+++ P + + ++ QY Y+N R + +L+NH A C D A+
Sbjct: 234 LTLRGWVADPNHTTPALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGAD 283
>WB|WBGene00004064 [details] [associations]
symbol:pms-2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0009792 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272
PIR:B89219 PIR:T21953 PIR:T21957 RefSeq:NP_505933.1
ProteinModelPortal:G5EFG5 SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5
EnsemblMetazoa:H12C20.2a GeneID:179587 KEGG:cel:CELE_H12C20.2
CTD:179587 WormBase:H12C20.2a NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 212 (79.7 bits), Expect = 3.8e-22, Sum P(3) = 3.8e-22
Identities = 99/405 (24%), Positives = 171/405 (42%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY--VKVVDDGS 61
I R+ + V + + V+ L+ + +L+ NS+DAG+T + + V N + ++V D+GS
Sbjct: 6 IERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKN-NGFESIEVQDNGS 64
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI L + H+ TSKL +D D + T GFRGEAL ++ VS + I T+A
Sbjct: 65 GIEARNFDALCKPHS-TSKLTQFSDFDK---LATLGFRGEALNALCTVSSVSIFTRASDT 120
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
G R S + +++GTT++ LF PVRRK ++ S K+ + V
Sbjct: 121 EIGTRLTYDHSGNIICR-QSAARELGTTIIVNKLFETLPVRRKELERSQKREFVKLLSTV 179
Query: 182 LRIALVHPKVSFKFIDMES--EDELLCTCXXXXXXXXXXXX-FGI----EDF---SFLDE 231
AL+ P + + + + L+CT FGI E+ S L
Sbjct: 180 QSFALLCPHIKILCTNNINGKKTNLICTPGGTTSIQDVVANLFGIARKIENSKIGSGLIP 239
Query: 232 VNANDGALEISGYISSPYDSISV-KAFQYV-YINS-RYVC-KGPIHKLLNHLA-ASFDCS 286
+ N +EI S P + + F+ +++S + C +G + ++ + S
Sbjct: 240 IQQNQPDVEIMTIHSVPMEEMHFFDLFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYS 299
Query: 287 DSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
N K + +K Q P +L + P D+ P K V+ + +LA + +
Sbjct: 300 RVCSVINDVYK-QFNKKQY-PIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRAS 357
Query: 347 IRSAWMKKIAHDSFDVDMLEDAELP-LESSRFXXXXXXXXXXXXP 390
+ ++K + S +ED + L F P
Sbjct: 358 MMKTYLKIVGSHSTVRSSVEDRRIMNLSQQSFSNASFMSSKSSTP 402
Score = 114 (45.2 bits), Expect = 3.8e-22, Sum P(3) = 3.8e-22
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 1274 LLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSE 1333
L A P + L++ DL E L ++ P + ++ SKACR ++M G L E
Sbjct: 709 LTARPELLNQQLTNSDLEEILAVVSQYPNQMYRPVRIRKIFASKACRKSVMIGKPLNQRE 768
Query: 1334 CALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
I+ L + + C HGRPT L +L
Sbjct: 769 MTQIIRHLAKLDQPWNCPHGRPTIRHLASL 798
Score = 74 (31.1 bits), Expect = 3.8e-22, Sum P(3) = 3.8e-22
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 1158 SINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELR 1204
S+ K K++ Q + FI G L ++DQHA+DE+ E L+
Sbjct: 610 SLTKDDFSKMKIIGQFNHGFIICRLRGHLFIVDQHASDEKYNFERLQ 656
>UNIPROTKB|G5EFG5 [details] [associations]
symbol:pms-2 "Protein PMS-2, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0009792 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272 PIR:B89219
PIR:T21953 PIR:T21957 RefSeq:NP_505933.1 ProteinModelPortal:G5EFG5
SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5 EnsemblMetazoa:H12C20.2a
GeneID:179587 KEGG:cel:CELE_H12C20.2 CTD:179587 WormBase:H12C20.2a
NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 212 (79.7 bits), Expect = 3.8e-22, Sum P(3) = 3.8e-22
Identities = 99/405 (24%), Positives = 171/405 (42%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY--VKVVDDGS 61
I R+ + V + + V+ L+ + +L+ NS+DAG+T + + V N + ++V D+GS
Sbjct: 6 IERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKN-NGFESIEVQDNGS 64
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI L + H+ TSKL +D D + T GFRGEAL ++ VS + I T+A
Sbjct: 65 GIEARNFDALCKPHS-TSKLTQFSDFDK---LATLGFRGEALNALCTVSSVSIFTRASDT 120
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
G R S + +++GTT++ LF PVRRK ++ S K+ + V
Sbjct: 121 EIGTRLTYDHSGNIICR-QSAARELGTTIIVNKLFETLPVRRKELERSQKREFVKLLSTV 179
Query: 182 LRIALVHPKVSFKFIDMES--EDELLCTCXXXXXXXXXXXX-FGI----EDF---SFLDE 231
AL+ P + + + + L+CT FGI E+ S L
Sbjct: 180 QSFALLCPHIKILCTNNINGKKTNLICTPGGTTSIQDVVANLFGIARKIENSKIGSGLIP 239
Query: 232 VNANDGALEISGYISSPYDSISV-KAFQYV-YINS-RYVC-KGPIHKLLNHLA-ASFDCS 286
+ N +EI S P + + F+ +++S + C +G + ++ + S
Sbjct: 240 IQQNQPDVEIMTIHSVPMEEMHFFDLFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYS 299
Query: 287 DSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
N K + +K Q P +L + P D+ P K V+ + +LA + +
Sbjct: 300 RVCSVINDVYK-QFNKKQY-PIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRAS 357
Query: 347 IRSAWMKKIAHDSFDVDMLEDAELP-LESSRFXXXXXXXXXXXXP 390
+ ++K + S +ED + L F P
Sbjct: 358 MMKTYLKIVGSHSTVRSSVEDRRIMNLSQQSFSNASFMSSKSSTP 402
Score = 114 (45.2 bits), Expect = 3.8e-22, Sum P(3) = 3.8e-22
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 1274 LLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSE 1333
L A P + L++ DL E L ++ P + ++ SKACR ++M G L E
Sbjct: 709 LTARPELLNQQLTNSDLEEILAVVSQYPNQMYRPVRIRKIFASKACRKSVMIGKPLNQRE 768
Query: 1334 CALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
I+ L + + C HGRPT L +L
Sbjct: 769 MTQIIRHLAKLDQPWNCPHGRPTIRHLASL 798
Score = 74 (31.1 bits), Expect = 3.8e-22, Sum P(3) = 3.8e-22
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 1158 SINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELR 1204
S+ K K++ Q + FI G L ++DQHA+DE+ E L+
Sbjct: 610 SLTKDDFSKMKIIGQFNHGFIICRLRGHLFIVDQHASDEKYNFERLQ 656
>UNIPROTKB|P74925 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243274 "Thermotoga maritima MSB8" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE000512 GenomeReviews:AE000512_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 EMBL:U71053 PIR:H72427
RefSeq:NP_227838.1 ProteinModelPortal:P74925 GeneID:896837
KEGG:tma:TM0022 PATRIC:23934884 OMA:IQTLGFR ProtClustDB:CLSK874928
Uniprot:P74925
Length = 510
Score = 290 (107.1 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 92/277 (33%), Positives = 145/277 (52%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVDDGS 61
I RLPE++ + +G V+ + + V++ELV NS+DA A ++ V + G N V+V D+G
Sbjct: 3 IKRLPESLVRKIAAGEVIHNPSFVLKELVENSLDAQADRIVVEIENGGKNM-VRVSDNGI 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G++R+ +L E + TSK+ +D I T+GFRGEALASI VS +I+TK
Sbjct: 62 GMTREEALLAIEPYT-TSKI---ESEEDLHRIRTYGFRGEALASIVQVSRAKIVTKTEKD 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ ++ G K I + +D GTTV RDLF+N PVRRK ++SS + L ++
Sbjct: 118 ALATQLMIAGGKVEE--ISETHRDTGTTVEVRDLFFNLPVRRKSLKSSAIE-LRMCREMF 174
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDF--SFLDEVNANDGAL 239
R LV V F F S+ +++ + +ED ++ G L
Sbjct: 175 ERFVLVRNDVDFVFT---SDGKIVHSFPRTQNIFERALLI-LEDLRKGYITFEEELSG-L 229
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLL 276
I G +SS + S + +Y Y+N R+V +H++L
Sbjct: 230 RIKGIVSSREVTRSSRTGEYFYVNGRFVVSEELHEVL 266
Score = 46 (21.3 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 18/63 (28%), Positives = 26/63 (41%)
Query: 1173 VDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS----VAYLDAEQELVLPE 1228
V K+ V L +D HA ER EE+ K G+ + L E++ L E
Sbjct: 353 VKGKYAVVEVEDGLLFVDLHALHERTIYEEILSKKSWGKRRVKRNITVVLSREEKQKLEE 412
Query: 1229 IGY 1231
G+
Sbjct: 413 YGF 415
>GENEDB_PFALCIPARUM|MAL7P1.145 [details] [associations]
symbol:MAL7P1.145 "mismatch repair protein
pms1 homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0003684 "damaged DNA binding" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0003684
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844506 HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
RefSeq:XP_001349161.1 ProteinModelPortal:Q8IBJ3 IntAct:Q8IBJ3
MINT:MINT-1637001 EnsemblProtists:MAL7P1.145:mRNA GeneID:2655088
KEGG:pfa:MAL7P1.145 EuPathDB:PlasmoDB:PF3D7_0726300 Uniprot:Q8IBJ3
Length = 1330
Score = 243 (90.6 bits), Expect = 7.5e-22, Sum P(4) = 7.5e-22
Identities = 81/286 (28%), Positives = 139/286 (48%)
Query: 9 EAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDG 67
E++ N + S V+F L+ VV+ELV NS+DA A+++ + + ++V D+G GI +
Sbjct: 9 ESIHN-ICSSQVIFTLSSVVKELVENSIDADASEIKIKLVESGIKLIEVNDNGVGIKKIN 67
Query: 68 LVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRK 127
+ RHA TSK+ D+ + + T GFRGEAL S+ +S + I TK + Y
Sbjct: 68 FENICARHA-TSKIKDFNDIHSS--LNTLGFRGEALNSLCMLSNVNITTKNEENDHAY-- 122
Query: 128 VMKGSKCLYLGIDDERKDV-GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIAL 186
++K K L ++ + GTTV ++F+N P+R+K + K + + + + A+
Sbjct: 123 LLKFDKLGRLYHEEPIARLRGTTVSCENIFHNIPIRKKDFIKNIKTQVSDLLLLMQQYAI 182
Query: 187 VHPKVSFKFIDMESED------ELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALE 240
++ + F ++ + LL T +G + L E N +
Sbjct: 183 IYHNIKFVIYNIVTSKGCTKNMNLLITNGTDSIKKNFYSIYGKRNIGNLIEFNIDGNEWN 242
Query: 241 ISGYISSPYDSISVKAFQYVYINSR--YVCKGPIHKLLNHLAASFD 284
I GYIS K Q+ YINSR ++ K ++KL+N + F+
Sbjct: 243 IRGYISDSNSGRRDKDLQFYYINSRPIHILKN-VNKLINTIYREFN 287
Score = 105 (42.0 bits), Expect = 7.5e-22, Sum P(4) = 7.5e-22
Identities = 25/56 (44%), Positives = 31/56 (55%)
Query: 1307 PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVN 1362
P V R+L SKACR AIM G +L E I ++L + C HGRPT L+N
Sbjct: 1218 PQKVWRILASKACRNAIMVGKALNIYEMIKIKKKLSFLKNPWNCPHGRPTIKYLIN 1273
Score = 63 (27.2 bits), Expect = 7.5e-22, Sum P(4) = 7.5e-22
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEG-KSVAYLDAE----QELVLPEIGYQLLQN-FAE 1239
L +IDQHAADE+ E+ +K+ + + K ++ + + Q ++ + LQN F
Sbjct: 1065 LFIIDQHAADEKSNFEKY-NKIFTMKSQKLISKIHVQVSPAQVHIIQKYMSIFLQNGFEV 1123
Query: 1240 QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVIT--LLAVPCIFGVNLSDVDLLEFLQQL 1297
QI + I + + N+ ++ + + + LL++P G L VD + L L
Sbjct: 1124 QILEEP-IHKRRKTNNNNINEPIDDEEEMLMELNVYLLSLPVFNGKILEVVDFMSLLHHL 1182
Query: 1298 AD 1299
+
Sbjct: 1183 TE 1184
Score = 41 (19.5 bits), Expect = 7.5e-22, Sum P(4) = 7.5e-22
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 983 YKFRNHNCEPNPIHKELSRRSHSAPPFHRHKR 1014
Y + +N PN I + +H H H +
Sbjct: 351 YFLKANNILPNQIKSNIKLETHEHDDNHHHHK 382
Score = 39 (18.8 bits), Expect = 2.0e-19, Sum P(4) = 2.0e-19
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 1123 QTTNNNISCDIHNQDNIL-DISSGLLHL 1149
+T NNNI+ I +++ +L +++ LL L
Sbjct: 1135 KTNNNNINEPIDDEEEMLMELNVYLLSL 1162
Score = 37 (18.1 bits), Expect = 1.9e-21, Sum P(4) = 1.9e-21
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 488 EGDHLFRKECERITFGDAEKD--PAELQEEN 516
E D L+R +++ ++KD P E + N
Sbjct: 493 ENDELYRDNTSSLSYTLSQKDYIPTENKMNN 523
>UNIPROTKB|Q8IBJ3 [details] [associations]
symbol:MAL7P1.145 "Mismatch repair protein pms1 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003684
"damaged DNA binding" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0003684
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844506 HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
RefSeq:XP_001349161.1 ProteinModelPortal:Q8IBJ3 IntAct:Q8IBJ3
MINT:MINT-1637001 EnsemblProtists:MAL7P1.145:mRNA GeneID:2655088
KEGG:pfa:MAL7P1.145 EuPathDB:PlasmoDB:PF3D7_0726300 Uniprot:Q8IBJ3
Length = 1330
Score = 243 (90.6 bits), Expect = 7.5e-22, Sum P(4) = 7.5e-22
Identities = 81/286 (28%), Positives = 139/286 (48%)
Query: 9 EAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDG 67
E++ N + S V+F L+ VV+ELV NS+DA A+++ + + ++V D+G GI +
Sbjct: 9 ESIHN-ICSSQVIFTLSSVVKELVENSIDADASEIKIKLVESGIKLIEVNDNGVGIKKIN 67
Query: 68 LVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRK 127
+ RHA TSK+ D+ + + T GFRGEAL S+ +S + I TK + Y
Sbjct: 68 FENICARHA-TSKIKDFNDIHSS--LNTLGFRGEALNSLCMLSNVNITTKNEENDHAY-- 122
Query: 128 VMKGSKCLYLGIDDERKDV-GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIAL 186
++K K L ++ + GTTV ++F+N P+R+K + K + + + + A+
Sbjct: 123 LLKFDKLGRLYHEEPIARLRGTTVSCENIFHNIPIRKKDFIKNIKTQVSDLLLLMQQYAI 182
Query: 187 VHPKVSFKFIDMESED------ELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALE 240
++ + F ++ + LL T +G + L E N +
Sbjct: 183 IYHNIKFVIYNIVTSKGCTKNMNLLITNGTDSIKKNFYSIYGKRNIGNLIEFNIDGNEWN 242
Query: 241 ISGYISSPYDSISVKAFQYVYINSR--YVCKGPIHKLLNHLAASFD 284
I GYIS K Q+ YINSR ++ K ++KL+N + F+
Sbjct: 243 IRGYISDSNSGRRDKDLQFYYINSRPIHILKN-VNKLINTIYREFN 287
Score = 105 (42.0 bits), Expect = 7.5e-22, Sum P(4) = 7.5e-22
Identities = 25/56 (44%), Positives = 31/56 (55%)
Query: 1307 PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVN 1362
P V R+L SKACR AIM G +L E I ++L + C HGRPT L+N
Sbjct: 1218 PQKVWRILASKACRNAIMVGKALNIYEMIKIKKKLSFLKNPWNCPHGRPTIKYLIN 1273
Score = 63 (27.2 bits), Expect = 7.5e-22, Sum P(4) = 7.5e-22
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEG-KSVAYLDAE----QELVLPEIGYQLLQN-FAE 1239
L +IDQHAADE+ E+ +K+ + + K ++ + + Q ++ + LQN F
Sbjct: 1065 LFIIDQHAADEKSNFEKY-NKIFTMKSQKLISKIHVQVSPAQVHIIQKYMSIFLQNGFEV 1123
Query: 1240 QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVIT--LLAVPCIFGVNLSDVDLLEFLQQL 1297
QI + I + + N+ ++ + + + LL++P G L VD + L L
Sbjct: 1124 QILEEP-IHKRRKTNNNNINEPIDDEEEMLMELNVYLLSLPVFNGKILEVVDFMSLLHHL 1182
Query: 1298 AD 1299
+
Sbjct: 1183 TE 1184
Score = 41 (19.5 bits), Expect = 7.5e-22, Sum P(4) = 7.5e-22
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 983 YKFRNHNCEPNPIHKELSRRSHSAPPFHRHKR 1014
Y + +N PN I + +H H H +
Sbjct: 351 YFLKANNILPNQIKSNIKLETHEHDDNHHHHK 382
Score = 39 (18.8 bits), Expect = 2.0e-19, Sum P(4) = 2.0e-19
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 1123 QTTNNNISCDIHNQDNIL-DISSGLLHL 1149
+T NNNI+ I +++ +L +++ LL L
Sbjct: 1135 KTNNNNINEPIDDEEEMLMELNVYLLSL 1162
Score = 37 (18.1 bits), Expect = 1.9e-21, Sum P(4) = 1.9e-21
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 488 EGDHLFRKECERITFGDAEKD--PAELQEEN 516
E D L+R +++ ++KD P E + N
Sbjct: 493 ENDELYRDNTSSLSYTLSQKDYIPTENKMNN 523
>TIGR_CMR|SO_0601 [details] [associations]
symbol:SO_0601 "DNA mismatch repair protein MutL"
species:211586 "Shewanella oneidensis MR-1" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323 HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
ProtClustDB:PRK00095 HOGENOM:HOG000256551 RefSeq:NP_716234.1
ProteinModelPortal:Q8EJ70 SMR:Q8EJ70 GeneID:1168468
KEGG:son:SO_0601 PATRIC:23520892 OMA:FTHIDEW Uniprot:Q8EJ70
Length = 631
Score = 292 (107.8 bits), Expect = 8.3e-22, Sum P(2) = 8.3e-22
Identities = 90/282 (31%), Positives = 140/282 (49%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I LP + N + +G V+ VV+ELV NS+DAGA+++ + + +K+ D+
Sbjct: 1 MG-IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIEIDKGGSKLIKIRDN 59
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI ++ L L RHA TSKL H +DD I +FGFRGEALASIS VS L + ++
Sbjct: 60 GSGIPKEELALALSRHA-TSKL-H--SLDDLEAILSFGFRGEALASISSVSRLTLTSRTA 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ ++ +G + + + + VG+T+ DLF+N P RR++++S + H + +
Sbjct: 116 EQSEAWQAYAEGVE-MAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTH-IDE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDE---VNAND 236
+ RIALV + F + F DE V
Sbjct: 174 WLKRIALVRGDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQ--VAGRPFADEALRVECQH 231
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH 278
L +SGY+ SP+ ++ Y Y+N R V +L+NH
Sbjct: 232 DDLRLSGYLQSPWSTVLTDT-HYFYVNGRLVRD----RLVNH 268
Score = 49 (22.3 bits), Expect = 8.3e-22, Sum P(2) = 8.3e-22
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 307 PAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P Y+L L PH + D+ P K V F V +I +A++SA
Sbjct: 283 PGYVLMLDIDPHQV-DVNVHPAKHEVRFHQSRYVHDYILQALQSA 326
>UNIPROTKB|F1NQJ2 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=IEA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:AADN02023908 EMBL:AADN02023909
IPI:IPI00819916 Ensembl:ENSGALT00000005429 ArrayExpress:F1NQJ2
Uniprot:F1NQJ2
Length = 878
Score = 190 (71.9 bits), Expect = 9.0e-22, Sum P(3) = 9.0e-22
Identities = 60/171 (35%), Positives = 86/171 (50%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI R+ + + SG V+ L V+ELV NS+DAGAT + V + ++V D+G
Sbjct: 29 TIKRIDRESVHRICSGQVVLSLGTAVKELVENSLDAGATNIDVRLKDHGAELIEVSDNGG 88
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+ + L +H TSK+ D D + TFGFRGEAL+S+ +S + I T
Sbjct: 89 GVEEENFEGLTLKHY-TSKI---QDFSDLIHVETFGFRGEALSSLCALSDVTISTCHKSA 144
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK 172
G R V + + R+ GTTV + LF+ PVR K Q + KK
Sbjct: 145 KVGTRLVFDHNGKITQKAPYPRQQ-GTTVSIQQLFHTLPVRHKEFQRNIKK 194
Score = 156 (60.0 bits), Expect = 9.0e-22, Sum P(3) = 9.0e-22
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I+K +++ Q + FI L +IDQHA DE+ E L+ + +G+ L
Sbjct: 684 ISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKYNFEMLQQHTVL-QGQK---L 739
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
A Q L L + +L E + G+ I N+N + QR + L+++P
Sbjct: 740 IAPQNLNLTAVNETVLIENLEIFRKNGFDFVI--------NENAPVTQR----VKLISLP 787
Query: 1279 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1338
D+ E + L+D G P V ++ S+ACR ++M G +L E +V
Sbjct: 788 TSKNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNVQEMKKLV 847
Query: 1339 EELKQTSLCFQCAHGRPTTVPLVNLEAL 1366
+ + + C HGRPT + +L+ +
Sbjct: 848 THMGEIEHPWNCPHGRPTMRHIASLDLI 875
Score = 53 (23.7 bits), Expect = 9.0e-22, Sum P(3) = 9.0e-22
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 948 CNKFSREHSDVPFDKTDWLCSVLSSIEYD--NPETQR-YKFRNHN-CEPNPIHKELSRRS 1003
C ++ + +D+P +K + +S ++ T R + F N C+P + K ++
Sbjct: 267 CEEYGLKSTDLP-EKLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVY 325
Query: 1004 HSAPPFHRHKRRYISLNCC 1022
H +++H+ +I LN C
Sbjct: 326 HL---YNKHQYPFIVLNIC 341
Score = 51 (23.0 bits), Expect = 4.8e-11, Sum P(3) = 4.8e-11
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 1259 NKNLNLLQRQITVITLLAVPCI--FGVNLSDVDLLEFLQQLADTDGSSTTPP 1308
+K LLQ + ++ +L I FG SDV+ L Q L D G+ PP
Sbjct: 354 DKRQILLQEEKLLLAILKTSLIEMFG---SDVNKLNVNQNLLDIVGNVKAPP 402
Score = 42 (19.8 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 223 IEDF-SFLDEVNANDGALEISGYISSP 248
IE F S ++++N N L+I G + +P
Sbjct: 375 IEMFGSDVNKLNVNQNLLDIVGNVKAP 401
Score = 38 (18.4 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 334 PFIVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSL 374
>UNIPROTKB|Q7SAM1 [details] [associations]
symbol:NCU08020 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B EMBL:AABX02000051
OMA:SDFAKMK RefSeq:XP_962690.2 UniGene:Ncr.24794
ProteinModelPortal:Q7SAM1 STRING:Q7SAM1
EnsemblFungi:EFNCRT00000008289 GeneID:3878856 KEGG:ncr:NCU08020
Uniprot:Q7SAM1
Length = 894
Score = 206 (77.6 bits), Expect = 2.7e-21, Sum P(3) = 2.7e-21
Identities = 64/197 (32%), Positives = 104/197 (52%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVVD 58
G I + + + ++SG V+ DL V +ELV N++DAGAT + F G+ + ++V D
Sbjct: 5 GAIKAIDPSTIHQIQSGQVIVDLCSVAKELVENALDAGATTIDVRFKNQGLDS--IEVQD 62
Query: 59 DGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 118
+GSGIS + +H TSKL ++ DD + + TFGFRGEAL+S+ +S I+T
Sbjct: 63 NGSGISSSNYESIALKHY-TSKL---SNYDDLSTLQTFGFRGEALSSLCALSHFTIVTCT 118
Query: 119 HGR-PNGYRKVMKGS-KCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
P + + S K + ++ GTTV +LF + PVRR+ ++ + K+
Sbjct: 119 QKEAPKATKLEFETSGKLKSTSVVSGQR--GTTVSVENLFKSLPVRRRELERNIKREWGK 176
Query: 177 VKKCVLRIALVHPKVSF 193
V + + A + V F
Sbjct: 177 VVNLLNQYACIQTSVKF 193
Score = 151 (58.2 bits), Expect = 2.7e-21, Sum P(3) = 2.7e-21
Identities = 55/212 (25%), Positives = 89/212 (41%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L +IDQHA+DE+ E L+ + V + L L + +++ + G
Sbjct: 665 LFIIDQHASDEKYNFERLQSTTTVQSQRLVQ----PKPLTLTAVEEEIILEHLPALAANG 720
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1305
+ + T G + LL ++ T FGV +D++ L FL L D SS
Sbjct: 721 FQVRVDTSGESAVGSRCQLLSLPLSRETT------FGV--ADLEELIFL--LGDNPTSSA 770
Query: 1306 T-----PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1360
T P V ++ +ACR +IM G +L + +V + + + C HGRPT L
Sbjct: 771 TTAIPRPSKVRKMFAMRACRSSIMIGRALSRPQMEKVVRHMGEMEKPWNCPHGRPTMRHL 830
Query: 1361 VNL-EALHKQIAQLNNSSELWHGLHRGEISLK 1391
L A + I + + W G+ R + K
Sbjct: 831 CGLGSAFGEGIKEKERGWDEWEGVERERVDWK 862
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 229 LDEVNANDGALEISGYISSPYDSISVKAF 257
LD + D SG SS Y+SI++K +
Sbjct: 55 LDSIEVQDNG---SGISSSNYESIALKHY 80
Score = 37 (18.1 bits), Expect = 2.7e-21, Sum P(3) = 2.7e-21
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 794 SQHLPRLSTAGDIT 807
++HLPR TA T
Sbjct: 577 AKHLPRAGTASSST 590
Score = 37 (18.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 504 DAEKDPAELQEENTEME 520
DAE+ E QEE E E
Sbjct: 871 DAEEGEGEGQEEEEEEE 887
>UNIPROTKB|A6VD59 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:381754 "Pseudomonas aeruginosa PA7" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:CP000744 GenomeReviews:CP000744_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 OMA:FLFINNR
ProtClustDB:PRK00095 HOGENOM:HOG000256551 RefSeq:YP_001350994.1
ProteinModelPortal:A6VD59 SMR:A6VD59 STRING:A6VD59 GeneID:5355304
KEGG:pap:PSPA7_5675 PATRIC:19832835
BioCyc:PAER381754:GHMY-5681-MONOMER Uniprot:A6VD59
Length = 633
Score = 253 (94.1 bits), Expect = 2.7e-21, Sum P(4) = 2.7e-21
Identities = 80/269 (29%), Positives = 130/269 (48%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I L + N + +G V+ V +EL+ NS+DAGA ++ V V ++V DDG G
Sbjct: 7 IQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGARRIDVEVEQGGVKLLRVRDDGRG 66
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I D L L RHA TSK+ L D++ +G FRGEALASIS V+ L + ++
Sbjct: 67 IPADDLPLALARHA-TSKIRELEDLERVMSLG---FRGEALASISSVARLTMTSRTADAG 122
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VGT+V RDLF+N P RRK++++ + H +++ +
Sbjct: 123 EAWQVETEG-RDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDH-LQEVIK 180
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFG-IEDFSFLDE---VNANDGA 238
R+AL V+F + + + G + +FL++ +
Sbjct: 181 RLALARFDVAFH---LRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIEVERNG 237
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYV 267
L + G++ P S S QY Y+N R V
Sbjct: 238 LHLWGWVGLPTFSRSQPDLQYFYVNGRMV 266
Score = 77 (32.2 bits), Expect = 2.7e-21, Sum P(4) = 2.7e-21
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 1313 VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHK 1368
+L + AC GA+ L E ++ +++ T QC HGRPT L L+ L K
Sbjct: 573 LLGTMACHGAVRANRRLTLPEMNALLRDMEITERSGQCNHGRPTWTQL-GLDELDK 627
Score = 55 (24.4 bits), Expect = 2.7e-21, Sum P(4) = 2.7e-21
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEG 1212
L ++D HAA ERI E L+ ++ EG
Sbjct: 463 LVLVDMHAAHERITYERLK-VAMASEG 488
Score = 41 (19.5 bits), Expect = 2.7e-21, Sum P(4) = 2.7e-21
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P ++L ++ D+ P K V F+D V F+ + A
Sbjct: 289 PTFVLFFEVDPAVVDVNVHPTKHEVRFRDSRMVHDFLYGTLHRA 332
>TIGR_CMR|VC_0345 [details] [associations]
symbol:VC_0345 "DNA mismatch repair protein MutL"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
ProtClustDB:PRK00095 PIR:A82334 RefSeq:NP_229999.1
ProteinModelPortal:Q9KV13 SMR:Q9KV13 DNASU:2615058 GeneID:2615058
KEGG:vch:VC0345 PATRIC:20079763 OMA:YAEGRDQ Uniprot:Q9KV13
Length = 653
Score = 292 (107.8 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 89/287 (31%), Positives = 143/287 (49%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GS
Sbjct: 2 TIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNGS 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI +D L L RHA TSK+ H +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 62 GIDKDELGLALSRHA-TSKI-HT--LDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ +G + + + + VGTTV DLF+N P RRK++++ + H + + +
Sbjct: 118 EEAWSAYSEG-RDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTH-IDELL 175
Query: 182 LRIALVHPKVSFKFI-DMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALE 240
RIAL VSF + + + G + + L+
Sbjct: 176 KRIALSRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLK 235
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCS 286
+ G+I++P + QY Y+N R + KL+NH + S++ S
Sbjct: 236 LHGWITTPEGARQQSDLQYCYVNGRMMRD----KLINHAIRQSYETS 278
Score = 43 (20.2 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 309 YLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
Y+L + PH + D+ P K V F V FI +A+ SA
Sbjct: 287 YVLFIELDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQALSSA 328
>UNIPROTKB|Q7RPM0 [details] [associations]
symbol:PY01438 "DNA mismatch repair protein, C-terminal
domain, putative" species:73239 "Plasmodium yoelii yoelii"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
EMBL:AABL01000381 RefSeq:XP_729204.1 ProteinModelPortal:Q7RPM0
GeneID:3801758 KEGG:pyo:PY01438 EuPathDB:PlasmoDB:PY01438
Uniprot:Q7RPM0
Length = 1157
Score = 254 (94.5 bits), Expect = 4.3e-21, Sum P(5) = 4.3e-21
Identities = 87/288 (30%), Positives = 149/288 (51%)
Query: 9 EAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY--VKVVDDGSGISRD 66
E++ N + S V+F L+ VV+ELV NS+DAGAT++ V + V N ++V D+G+GI +
Sbjct: 9 ESIHN-ICSSQVIFTLSNVVKELVENSIDAGATEIKVKL-VENGIKIIEVSDNGNGIKKI 66
Query: 67 GLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYR 126
+ RHA TSK+ D+ + + T GFRGEAL S+ +S L I TK +GY
Sbjct: 67 NFENVCARHA-TSKISEFDDIHNI--LDTLGFRGEALNSLCMLSDLCISTKHDEFEHGY- 122
Query: 127 KVMKGSKCLYLGIDDE--RKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRI 184
++K K L I +E + GTTV ++F N P+R+K + + K L+ + + +
Sbjct: 123 -LLKFDKFGKL-IHEEPIARLRGTTVSCENIFKNIPIRKKDLIKNIKSQLNDLLTLMQQY 180
Query: 185 ALVHPKVSFKFIDMESED------ELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGA 238
A+++ ++ F ++ ++ +L T FG ++ L + N +
Sbjct: 181 AIIYHEIKFMIFNVVTQKGCTKNMNMLITNGSDDIKKNFYSIFGKKNIGNLIDFNITNEN 240
Query: 239 LEISGYISSPYDSISVKAFQYVYINSR--YVCKGPIHKLLNHLAASFD 284
+ GYIS K Q+ Y+N+R +V K ++K++N + F+
Sbjct: 241 WLVKGYISDSNSGRRDKDLQFYYMNNRPIHVIKN-VNKIINTIYREFN 287
Score = 87 (35.7 bits), Expect = 4.3e-21, Sum P(5) = 4.3e-21
Identities = 26/77 (33%), Positives = 36/77 (46%)
Query: 1305 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
T P + L ACR A+M G +L SE I ++L + C HGRPT ++N
Sbjct: 1043 TVPLYLFSPLFVSACRNAVMVGKTLNISEMIRIKKKLSVLQNPWNCPHGRPTIKYIINNI 1102
Query: 1365 ALHKQIAQ--LNNSSEL 1379
+ K A LN E+
Sbjct: 1103 EIQKFYANYYLNLYEEI 1119
Score = 63 (27.2 bits), Expect = 4.3e-21, Sum P(5) = 4.3e-21
Identities = 30/123 (24%), Positives = 58/123 (47%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L +IDQHAADE+ E+ +K+ + + + + E EL +I + + +NF +++
Sbjct: 871 LFIIDQHAADEKSNFEKY-NKIFTMKSQKLIN-KIELELSPAQI-HIIEKNFVIFLRNGF 927
Query: 1246 WI------CNIHTQGSRSFNKNLNLLQRQITV---ITLLAVPCIFGVNLSDVDLLEFLQQ 1296
I N + + N + N++ + + + LL++P G L VD + L
Sbjct: 928 EIEIIEEPINKKRKINNDENNDENIISEETLMEMKVYLLSLPVFNGKILEVVDFMSLLHH 987
Query: 1297 LAD 1299
L +
Sbjct: 988 LTN 990
Score = 43 (20.2 bits), Expect = 4.3e-21, Sum P(5) = 4.3e-21
Identities = 25/120 (20%), Positives = 45/120 (37%)
Query: 477 LFSPPLENL--KKEGDHLFRKECERITFGDAEKDPAELQEENTEMEYVPQPKYSFGLSDG 534
L +P N + GD+ F K I +A+ + + E E+ + +Y G
Sbjct: 335 LLTPKTSNFVDTQIGDYFFVKSSRLIKSEEAQNERQSERAEIERTEHGERTEYGERAEHG 394
Query: 535 SFAKCLPIVPW-KIDRHAWTIESSRF---QYHQSSPHLYSSPLENLSKEGDHLFREECER 590
+ + R + E + Y + + Y+ EN +E D +FREE +
Sbjct: 395 ERQSERAEGEYTNVGRPVFENEELHYTSIDYKKMVKNEYTENEEN--EENDKIFREEVSK 452
Score = 37 (18.1 bits), Expect = 4.3e-21, Sum P(5) = 4.3e-21
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 1059 NVKPSSEEEDFRPDFKIESSTILDLEETHKAEN 1091
N+ ED + F + +++L + K N
Sbjct: 705 NINTYINREDMKRGFDYDQINLINLTNSEKIRN 737
>UNIPROTKB|F1NQJ3 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GeneTree:ENSGT00530000063289
EMBL:AADN02023908 EMBL:AADN02023909 IPI:IPI00604396
Ensembl:ENSGALT00000005427 ArrayExpress:F1NQJ3 Uniprot:F1NQJ3
Length = 858
Score = 194 (73.4 bits), Expect = 8.4e-21, Sum P(3) = 8.4e-21
Identities = 61/172 (35%), Positives = 87/172 (50%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI R+ + + SG V+ L V+ELV NS+DAGAT + V + ++V D+G
Sbjct: 6 TIKRIDRESVHRICSGQVVLSLGTAVKELVENSLDAGATNIDVRLKDHGAELIEVSDNGG 65
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+ + L +H TSK+ D D + TFGFRGEAL+S+ +S + I T
Sbjct: 66 GVEEENFEGLTLKHY-TSKI---QDFSDLIHVETFGFRGEALSSLCALSDVTISTCHKSA 121
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
G R V + + R+ GTTV + LF+ PVR K Q + KKV
Sbjct: 122 KVGTRLVFDHNGKITQKAPYPRQQ-GTTVSIQQLFHTLPVRHKEFQRNIKKV 172
Score = 142 (55.0 bits), Expect = 8.4e-21, Sum P(3) = 8.4e-21
Identities = 49/181 (27%), Positives = 82/181 (45%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L +IDQHA DE+ E L+ + +G+ L A Q L L + +L E + G
Sbjct: 693 LFIIDQHATDEKYNFEMLQQHTVL-QGQK---LIAPQNLNLTAVNETVLIENLEIFRKNG 748
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1305
+ I N+N + QR + L+++P D+ E + L+D G
Sbjct: 749 FDFVI--------NENAPVTQR----VKLISLPTSKNWTFGPQDIDELIFMLSDCPGVMC 796
Query: 1306 TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEA 1365
P V ++ S+ACR ++M G +L E +V + + + C HGRPT + +L+
Sbjct: 797 RPSRVRQMFASRACRKSVMIGTALNVQEMKKLVTHMGEIEHPWNCPHGRPTMRHIASLDL 856
Query: 1366 L 1366
+
Sbjct: 857 I 857
Score = 53 (23.7 bits), Expect = 8.4e-21, Sum P(3) = 8.4e-21
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 948 CNKFSREHSDVPFDKTDWLCSVLSSIEYD--NPETQR-YKFRNHN-CEPNPIHKELSRRS 1003
C ++ + +D+P +K + +S ++ T R + F N C+P + K ++
Sbjct: 244 CEEYGLKSTDLP-EKLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVY 302
Query: 1004 HSAPPFHRHKRRYISLNCC 1022
H +++H+ +I LN C
Sbjct: 303 HL---YNKHQYPFIVLNIC 318
Score = 51 (23.0 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 1259 NKNLNLLQRQITVITLLAVPCI--FGVNLSDVDLLEFLQQLADTDGSSTTPP 1308
+K LLQ + ++ +L I FG SDV+ L Q L D G+ PP
Sbjct: 331 DKRQILLQEEKLLLAILKTSLIEMFG---SDVNKLNVNQNLLDIVGNVKAPP 379
Score = 46 (21.3 bits), Expect = 9.0e-20, Sum P(4) = 9.0e-20
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 469 QDHQPSRHLFSPPLENLKKEGDHLFRKECERITFGDAEKDPAELQEENTEME 520
Q+++ R SP EN E D L RKE + F E P + + N+++E
Sbjct: 643 QNYRRFRAKISPG-ENKVAE-DEL-RKEISKEMFAKMEHWPVQFRVYNSQVE 691
Score = 42 (19.8 bits), Expect = 9.0e-20, Sum P(4) = 9.0e-20
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 223 IEDF-SFLDEVNANDGALEISGYISSP 248
IE F S ++++N N L+I G + +P
Sbjct: 352 IEMFGSDVNKLNVNQNLLDIVGNVKAP 378
Score = 38 (18.4 bits), Expect = 2.3e-19, Sum P(4) = 2.3e-19
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 311 PFIVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSL 351
>MGI|MGI:104288 [details] [associations]
symbol:Pms2 "postmeiotic segregation increased 2 (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006298 "mismatch
repair" evidence=ISO;IGI;IMP;TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IGI;IMP] [GO:0007126 "meiosis"
evidence=TAS] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IMP] [GO:0016447 "somatic recombination of
immunoglobulin gene segments" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0032138
"single base insertion or deletion binding" evidence=ISO]
[GO:0032389 "MutLalpha complex" evidence=IDA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 MGI:MGI:104288 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:COG0323 GermOnline:ENSMUSG00000029613 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0016447 HOGENOM:HOG000165474 HOVERGEN:HBG008219 EMBL:U28724
IPI:IPI00133511 UniGene:Mm.2950 ProteinModelPortal:P54279
SMR:P54279 STRING:P54279 PhosphoSite:P54279 PRIDE:P54279
ChiTaRS:Pms2 Genevestigator:P54279 Uniprot:P54279
Length = 859
Score = 195 (73.7 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 60/158 (37%), Positives = 85/158 (53%)
Query: 17 SGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLLGERH 75
SG V+ L+ V+EL+ NSVDAGAT + + + ++V D+G G+ + L +H
Sbjct: 28 SGQVILSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCGVEEENFEGLALKH 87
Query: 76 AATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN-GYRKVMKGSKC 134
TSK+ AD+ T + TFGFRGEAL+S+ +S + I T HG + G R V +
Sbjct: 88 H-TSKIQEFADL---TQVETFGFRGEALSSLCALSDVTIST-CHGSASVGTRLVFDHNGK 142
Query: 135 LYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK 172
+ R GTTV + LFY PVR K Q + KK
Sbjct: 143 ITQKTPYPRPK-GTTVSVQHLFYTLPVRYKEFQRNIKK 179
Score = 152 (58.6 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 56/210 (26%), Positives = 96/210 (45%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I+KS + ++L Q + FI L ++DQHAADE+ E L+ + L
Sbjct: 665 ISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTV---------L 715
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSF--NKNLNLLQRQITVITLLA 1276
A Q L+ P+ N A I++ I + F +++ + +R + +
Sbjct: 716 QA-QRLITPQTLNLTAVNEAVLIEN----LEIFRKNGFDFVIDEDAPVTERAKLISLPTS 770
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1336
FG D+D L F+ L+D+ G P V ++ S+ACR ++M G +L SE
Sbjct: 771 KNWTFGPQ--DIDELIFM--LSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNASEMKK 826
Query: 1337 IVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1366
++ + + + C HGRPT + NL+ +
Sbjct: 827 LITHMGEMDHPWNCPHGRPTMRHVANLDVI 856
Score = 38 (18.4 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 319 PFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 359
>UNIPROTKB|D3ZZF0 [details] [associations]
symbol:Pms2 "Protein Pms2" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 RGD:1305483 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
IPI:IPI00949446 ProteinModelPortal:D3ZZF0
Ensembl:ENSRNOT00000068106 ArrayExpress:D3ZZF0 Uniprot:D3ZZF0
Length = 850
Score = 194 (73.4 bits), Expect = 3.4e-20, Sum P(4) = 3.4e-20
Identities = 58/157 (36%), Positives = 84/157 (53%)
Query: 17 SGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLLGERH 75
SG V+ L+ V+EL+ NSVDAGAT + + + ++V D+G G+ + L +H
Sbjct: 28 SGQVVLSLSTAVKELIENSVDAGATSIDLRLKDYGVDLIEVSDNGCGVEEENFEGLALKH 87
Query: 76 AATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKGSKCL 135
TSK+ AD+ T + TFGFRGEAL+S+ +S + I T G R V+ + +
Sbjct: 88 H-TSKIREFADL---TQVETFGFRGEALSSLCALSDVTISTCHVSASIGTRLVLDHNGKI 143
Query: 136 YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK 172
R GTTV ++LFY PVR K Q + KK
Sbjct: 144 IQKTPCPRPK-GTTVSVQNLFYTLPVRHKEFQRNIKK 179
Score = 154 (59.3 bits), Expect = 3.4e-20, Sum P(4) = 3.4e-20
Identities = 56/210 (26%), Positives = 95/210 (45%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I KS + ++L Q + FI L ++DQHAADE+ E L+ + L
Sbjct: 656 IRKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTV---------L 706
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSF--NKNLNLLQRQITVITLLA 1276
A Q L+ P+ N A I++ I + F +++ + +R + +
Sbjct: 707 QA-QRLITPQTLNLTAVNEAVLIEN----LEIFRKNGFDFIIDEDAPVTERAKLISLPTS 761
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1336
FG D+D L F+ L+D+ G P V ++ S+ACR ++M G +L SE
Sbjct: 762 KNWTFGPQ--DIDELIFM--LSDSPGVMCRPSRVRQMFASRACRKSVMIGTALSASEMKK 817
Query: 1337 IVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1366
++ + + + C HGRPT + NL+ +
Sbjct: 818 LISHMGEMDHPWNCPHGRPTMRHIANLDVI 847
Score = 42 (19.8 bits), Expect = 3.4e-20, Sum P(4) = 3.4e-20
Identities = 33/161 (20%), Positives = 54/161 (33%)
Query: 956 SDVPFDKTDWLCSVLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHSAPPFHRHKRR 1015
S+ F + S S +PE R N NC + LS H P +
Sbjct: 500 SEEGFSTPEVASSFSSDCNVSSPE-DRPSQENTNC--GELDDHLSGTGHHLKPEDNGYKC 556
Query: 1016 YISLNCCSVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSSEEEDFRPDFKI 1075
SL SNA G + Q++ +V ++ DF +
Sbjct: 557 RASLP--PTRLSPSNAKRFRTEDRPSNVG----VPQNTSAAEVDVAVKINKKIVLLDFSL 610
Query: 1076 ES-----STILDLEETHKAEN----FKLSLCPHAHLGAQAE 1107
S + L++ K+E+ F+ +CP + A+ E
Sbjct: 611 SSLAKQMKQLQHLKQQSKSEHNYRKFRAKICPGENQAAEDE 651
Score = 41 (19.5 bits), Expect = 4.2e-20, Sum P(4) = 4.2e-20
Identities = 10/48 (20%), Positives = 22/48 (45%)
Query: 673 GDLLNSQRGYEYLQIEPGVSNGASGTASPLDKDEFSNEFEVSKDIKKP 720
GD ++ ++G + + + G ++P FS++ VS +P
Sbjct: 479 GDCMDREKGEKDSGLSSTSAGSEEGFSTPEVASSFSSDCNVSSPEDRP 526
Score = 38 (18.4 bits), Expect = 3.4e-20, Sum P(4) = 3.4e-20
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 320 PFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 360
Score = 37 (18.1 bits), Expect = 4.2e-20, Sum P(4) = 4.2e-20
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 295 FLKGKRSKSQACPAYLLNLR 314
F KR S +CP+ +++ R
Sbjct: 443 FPSQKRGVSSSCPSDIISYR 462
>WB|WBGene00003373 [details] [associations]
symbol:mlh-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 GeneTree:ENSGT00550000074923 HSSP:P54278
EMBL:Z92813 PIR:T25389 RefSeq:NP_499796.2 ProteinModelPortal:Q9XU10
SMR:Q9XU10 DIP:DIP-24835N IntAct:Q9XU10 MINT:MINT-227084
STRING:Q9XU10 EnsemblMetazoa:T28A8.7.1 EnsemblMetazoa:T28A8.7.2
GeneID:176783 KEGG:cel:CELE_T28A8.7 UCSC:T28A8.7.1 CTD:176783
WormBase:T28A8.7 InParanoid:Q9XU10 NextBio:893988 Uniprot:Q9XU10
Length = 758
Score = 276 (102.2 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 104/377 (27%), Positives = 168/377 (44%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I RLP+ V N + +G VL ++ELV NS+DAGAT++ V + ++V D+
Sbjct: 1 MGLIQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI R+ L+ ER A TSKL +D + T+GFRGEALAS+S V+ + I++K
Sbjct: 61 GKGIEREDFALVCERFA-TSKL---QKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
Y+ K K+ GT + + DLFYN P RR M + ++ V
Sbjct: 117 DAKCAYQANFLDGKMTADTKPAAGKN-GTCITATDLFYNLPTRRNKMTTHGEEA-KMVND 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGAL 239
+LR A+ P VSF ++ D T G + + ++ N L
Sbjct: 175 TLLRFAIHRPDVSFALRQNQAGD--FRTKGDGNFRDVVCNLLGRDVADTILPLSLNSTRL 232
Query: 240 EIS--GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ + G+IS P S + Q +R + +N S C + L
Sbjct: 233 KFTFTGHISKPIASATAAIAQ-----NRKTSRSFFSVFIN--GRSVRCDILKHPIDEVLG 285
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
++ +Q C L+L+ + D+ P K V+F + E ++ I +
Sbjct: 286 ARQLHAQFCA---LHLQIDETRIDVNVHPTKNSVIFLEKEEIIEEIRAYFEKVIGEIFGF 342
Query: 358 DSFDVDMLEDAELPLES 374
++ DV+ E+ + +E+
Sbjct: 343 EALDVEKPEEEQPDIEN 359
>UNIPROTKB|Q9XU10 [details] [associations]
symbol:mlh-1 "Protein MLH-1" species:6239 "Caenorhabditis
elegans" [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032407 "MutSalpha
complex binding" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0016887
"ATPase activity" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 GeneTree:ENSGT00550000074923 HSSP:P54278
EMBL:Z92813 PIR:T25389 RefSeq:NP_499796.2 ProteinModelPortal:Q9XU10
SMR:Q9XU10 DIP:DIP-24835N IntAct:Q9XU10 MINT:MINT-227084
STRING:Q9XU10 EnsemblMetazoa:T28A8.7.1 EnsemblMetazoa:T28A8.7.2
GeneID:176783 KEGG:cel:CELE_T28A8.7 UCSC:T28A8.7.1 CTD:176783
WormBase:T28A8.7 InParanoid:Q9XU10 NextBio:893988 Uniprot:Q9XU10
Length = 758
Score = 276 (102.2 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 104/377 (27%), Positives = 168/377 (44%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I RLP+ V N + +G VL ++ELV NS+DAGAT++ V + ++V D+
Sbjct: 1 MGLIQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI R+ L+ ER A TSKL +D + T+GFRGEALAS+S V+ + I++K
Sbjct: 61 GKGIEREDFALVCERFA-TSKL---QKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
Y+ K K+ GT + + DLFYN P RR M + ++ V
Sbjct: 117 DAKCAYQANFLDGKMTADTKPAAGKN-GTCITATDLFYNLPTRRNKMTTHGEEA-KMVND 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGAL 239
+LR A+ P VSF ++ D T G + + ++ N L
Sbjct: 175 TLLRFAIHRPDVSFALRQNQAGD--FRTKGDGNFRDVVCNLLGRDVADTILPLSLNSTRL 232
Query: 240 EIS--GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ + G+IS P S + Q +R + +N S C + L
Sbjct: 233 KFTFTGHISKPIASATAAIAQ-----NRKTSRSFFSVFIN--GRSVRCDILKHPIDEVLG 285
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
++ +Q C L+L+ + D+ P K V+F + E ++ I +
Sbjct: 286 ARQLHAQFCA---LHLQIDETRIDVNVHPTKNSVIFLEKEEIIEEIRAYFEKVIGEIFGF 342
Query: 358 DSFDVDMLEDAELPLES 374
++ DV+ E+ + +E+
Sbjct: 343 EALDVEKPEEEQPDIEN 359
>TIGR_CMR|NSE_0609 [details] [associations]
symbol:NSE_0609 "DNA mismatch repair protein, MutL/HexB
family" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR
RefSeq:YP_506489.1 ProteinModelPortal:Q2GDF7 STRING:Q2GDF7
GeneID:3931746 KEGG:nse:NSE_0609 PATRIC:22681251
ProtClustDB:CLSK2527761 BioCyc:NSEN222891:GHFU-625-MONOMER
Uniprot:Q2GDF7
Length = 652
Score = 225 (84.3 bits), Expect = 5.9e-20, Sum P(5) = 5.9e-20
Identities = 70/194 (36%), Positives = 109/194 (56%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP + N + +G +L V+ELV N++DAG+T + V + V ++V D+G G
Sbjct: 3 IHILPIEIINKIAAGEILEKPANAVKELVENAIDAGSTSIKVELEEVGRNLIRVTDNGVG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
ISR+ L L E+HA TSKL + D+ D I GFRGEAL SI+ S ++I + +G
Sbjct: 63 ISREDLPLAIEKHA-TSKL-NTKDLYD---ISYLGFRGEALHSIAITSEMKIASCFNGE- 116
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
GY V+ + GT V R LF+N P + ++++S K L S+ + +
Sbjct: 117 -GY--VIDAQT---KEVKPHHIKCGTLVEVRKLFHNIPNKLRFLRSE-KTELSSIIELLN 169
Query: 183 RIALVHPKVSFKFI 196
R+ALV+P ++F+ I
Sbjct: 170 RLALVNPNIAFELI 183
Score = 81 (33.6 bits), Expect = 5.9e-20, Sum P(5) = 5.9e-20
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1231
QV FI + +IDQHAA ERI E+++ K ++ G+++ L AE + L E
Sbjct: 475 QVHGTFIITETENEMIIIDQHAAHERILYEQMK-KSITSPGQNL--LTAEF-VPLSEKAV 530
Query: 1232 QLLQNFAEQIKDWGWI 1247
++L E++K+ G +
Sbjct: 531 EILSFNVEKLKEIGLV 546
Score = 71 (30.1 bits), Expect = 5.9e-20, Sum P(5) = 5.9e-20
Identities = 28/115 (24%), Positives = 55/115 (47%)
Query: 1257 SFN----KNLNLLQRQIT--VITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSV 1310
SFN K + L+ +++ + + ++P F N+ +L+E + L + + P ++
Sbjct: 534 SFNVEKLKEIGLVVERVSHCAVMVNSLPEAFK-NVPTNELIEDIASLLEEE---IEPKTL 589
Query: 1311 LRVLNSK-ACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
L +++ AC+ AI +L E ++ ++ QC HGRPT + L E
Sbjct: 590 LERIHANIACKRAIKANHNLTREEIEELLTLMEDIPHTGQCNHGRPTHIRLPRKE 644
Score = 42 (19.8 bits), Expect = 5.9e-20, Sum P(5) = 5.9e-20
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 343
P ++ +R ++ D+ P K+ V F+D + + F+
Sbjct: 275 PIAVIFIRVHNNEVDVNIHPNKSEVKFRDPQVIRRFL 311
Score = 37 (18.1 bits), Expect = 5.9e-20, Sum P(5) = 5.9e-20
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 420 ELAEENTEMEFFSQPKHSSSL 440
E + TE FF PK ++
Sbjct: 351 ETVSKTTESGFFQSPKAKKAI 371
>UNIPROTKB|F1RFM9 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 CTD:5395 EMBL:FP102636
RefSeq:XP_003124331.1 Ensembl:ENSSSCT00000008330 GeneID:100514342
KEGG:ssc:100514342 Uniprot:F1RFM9
Length = 852
Score = 191 (72.3 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 59/157 (37%), Positives = 83/157 (52%)
Query: 17 SGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLLGERH 75
SG V+ L+ V+ELV NSVDAGAT + + + ++V D+G G+ + L +H
Sbjct: 28 SGQVVLSLSTAVKELVENSVDAGATNIDLRLKDYGMDLIEVSDNGCGVEEENFEGLTLKH 87
Query: 76 AATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKGSKCL 135
TSK+ AD+ T + TFGFRGEAL+S+ +S + I T G R V + +
Sbjct: 88 H-TSKIQEFADL---TQVETFGFRGEALSSLCALSDVTISTCHASAKVGTRLVFDHNGKI 143
Query: 136 YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK 172
L + GTTV + LFY PVR K Q + KK
Sbjct: 144 -LQKSPYPRPRGTTVSVQQLFYTLPVRHKEFQRNIKK 179
Score = 149 (57.5 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 52/210 (24%), Positives = 96/210 (45%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I+K + +++ Q + FI + ++DQHA DE+ E L+ + +G
Sbjct: 658 ISKEMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTVL-QG------ 710
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSF--NKNLNLLQRQITVITLLA 1276
Q L++P+ N A I++ +I + F +++ + +R + +
Sbjct: 711 ---QRLIVPQTLNLTAVNEAVLIEN----LDIFRKNGFDFVIDEDAPVTERAKLISLPTS 763
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1336
FG D+D L F+ L+D+ G P V ++ S+ACR ++M G +L SE
Sbjct: 764 KNWTFGPQ--DIDELIFM--LSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMRR 819
Query: 1337 IVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1366
+V + + + C HGRPT + NL+ +
Sbjct: 820 LVSHMGEMDHPWNCPHGRPTMRHIANLDVI 849
Score = 43 (20.2 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 578 KEGDHLFREECERITFGEFEKHTPELKEENSK 609
+EG+ +R+ +I GE + EL++E SK
Sbjct: 629 REGEQNYRKFRAKICPGENQAAEDELRKEISK 660
Score = 42 (19.8 bits), Expect = 6.9e-09, Sum P(3) = 6.9e-09
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 486 KKEGDHLFRKECERITFGDAEKDPAELQEENT-----EMEYVPQPKYSFGLSDGSFAKCL 540
++EG+ +RK +I G+ + EL++E + EME + Q F L G L
Sbjct: 628 QREGEQNYRKFRAKICPGENQAAEDELRKEISKEMFAEMEIIGQ----FNL--GFIITKL 681
Query: 541 PIVPWKIDRHAWTIESSRFQYHQ 563
+ +D+HA T E F+ Q
Sbjct: 682 NADIFIVDQHA-TDEKYNFEMLQ 703
Score = 39 (18.8 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 319 PFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 359
>TIGR_CMR|APH_0939 [details] [associations]
symbol:APH_0939 "DNA mismatch repair protein MutL"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:CP000235 GenomeReviews:CP000235_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
RefSeq:YP_505509.1 ProteinModelPortal:Q2GJE2 STRING:Q2GJE2
GeneID:3931281 KEGG:aph:APH_0939 PATRIC:20950598
HOGENOM:HOG000256550 KO:K03572 OMA:IRNGTPM ProtClustDB:CLSK2465330
BioCyc:APHA212042:GHPM-952-MONOMER Uniprot:Q2GJE2
Length = 634
Score = 194 (73.4 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 69/256 (26%), Positives = 120/256 (46%)
Query: 13 NTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVDDGSGISRDGLVL 70
N + +G V+ VV+ELV NS+DAGA + V+V G N + V DDG GI+ + +
Sbjct: 12 NKIAAGEVIDCPASVVKELVENSIDAGAKTINVHVDKGGRNL-ISVSDDGCGIACEEMEK 70
Query: 71 LGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMK 130
HA TSKL D D + T GFRGE L +++ V+ +++++K + +
Sbjct: 71 AFIGHA-TSKL---ID-GDLANVKTMGFRGEGLTAVASVARVKMVSKHVDAERAWSITFE 125
Query: 131 GSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPK 190
G + + GT V RDLF+ P R K++++ K + ++ + R+A+++
Sbjct: 126 GGEKTR-DLTPGVLSCGTHVEVRDLFFATPTRLKFLRTE-KAEMQNIVDLLNRLAMINYT 183
Query: 191 VSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLD-EVNANDGALEISGYISSPY 249
++F +E + FG E F E+N + + + G+I P
Sbjct: 184 IAFSLTIVERQIFKYSAQESLIERLKEMRAFG-EVFCEQSLEINHSIDHVRVYGHIGLPT 242
Query: 250 DSISVKAFQYVYINSR 265
+ S + ++N R
Sbjct: 243 FNKSKPGMVHTFVNGR 258
Score = 130 (50.8 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 51/190 (26%), Positives = 85/190 (44%)
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEG-KSVAYLDAEQELVLPEIG 1230
Q+ +++I AG + ++DQHAA ER+ E ++ KV EG K L E + E
Sbjct: 450 QLFERYIISRAGDYVIIVDQHAAHERLVCEYIK-KVTEQEGIKRQVLLMPEFIELGNEYE 508
Query: 1231 YQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1290
+LL + E+++D G I + G +TV+ + VP IFGV + +
Sbjct: 509 LELLTEYREKLRDLGLI--VEPMGD-------------LTVV-VREVPAIFGVVDAKALI 552
Query: 1291 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1350
+ L+ + + + + AC +I G + E ++ ++ T QC
Sbjct: 553 SKILESIMAKGDELFVKGKLSHICGTVACYSSIRSGRIMKLEEMNSLLRHMESTPHSGQC 612
Query: 1351 AHGRPTTVPL 1360
HGRPT V L
Sbjct: 613 NHGRPTYVKL 622
Score = 40 (19.1 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 474 SRHLFSPPLENLKKEGDHLFRK 495
++ L S LE++ +GD LF K
Sbjct: 548 AKALISKILESIMAKGDELFVK 569
Score = 37 (18.1 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 568 LYSSPLENLSKEGDHLF 584
L S LE++ +GD LF
Sbjct: 551 LISKILESIMAKGDELF 567
>ASPGD|ASPL0000093218 [details] [associations]
symbol:AN11853 species:162425 "Emericella nidulans"
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000404 "loop DNA binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0000710 "meiotic mismatch repair"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 192 (72.6 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 63/180 (35%), Positives = 92/180 (51%)
Query: 17 SGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLLGERH 75
SG V+ DLT V++ELV NS+DAGAT + V ++V D+GSGI+ + + +H
Sbjct: 12 SGQVIVDLTSVIKELVENSLDAGATSIEVRFRNSGLDLIEVQDNGSGIAPENYENVALKH 71
Query: 76 AATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIIT-KAHGRPNGYRKVMKGS-K 133
TSKL + DD + TFGFRGEAL+S+ +S I T +A+ P R + S K
Sbjct: 72 Y-TSKL---SSYDDLLHLQTFGFRGEALSSLCALSDFRITTAQANQAPRATRLEFEQSGK 127
Query: 134 CLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKVSF 193
+ +K GT LF PVRR+ ++ + K+ V + A + V F
Sbjct: 128 LRKTEVVAGQK--GTVASVESLFRKLPVRRRELEKNIKREYGKVLNLLHAYACISTGVRF 185
Score = 135 (52.6 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 52/202 (25%), Positives = 90/202 (44%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L +IDQHA+DE+I E L+ + V + V EI +++N K+ G
Sbjct: 793 LFIIDQHASDEKINFERLQSTTTVQNQRLVHPKRLDLTAVEEEI---VIENQVILEKN-G 848
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1305
++ ++ G + + +LL L+ +F V DL E + L +T +T
Sbjct: 849 FVVDVDDSGDKPIGQRCSLLSLP------LSKEVVFDVR----DLEELIAILTETSTPNT 898
Query: 1306 T--------PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT 1357
T P V ++ +ACR +IM G +L + +V ++ + C HGRPT
Sbjct: 899 TGPEIDIPRPSKVRKMFAMRACRSSIMIGKTLTQRQMERVVRDMGTIDKPWNCPHGRPTM 958
Query: 1358 VPLVNLEA--LHKQIAQLNNSS 1377
L +L + + A ++N+S
Sbjct: 959 RHLFSLGRWEVWDEYADIHNAS 980
Score = 53 (23.7 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 239 LEISGYISSPY--DSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 288
+++ G+IS P + Q +++NSR I K +N + SF+ + S
Sbjct: 249 IQVRGHISRPVFGEGRQTPDRQMLFVNSRPCALPQITKAINEVYKSFNLAQS 300
>ASPGD|ASPL0000095187 [details] [associations]
symbol:AN11854 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 192 (72.6 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 63/180 (35%), Positives = 92/180 (51%)
Query: 17 SGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLLGERH 75
SG V+ DLT V++ELV NS+DAGAT + V ++V D+GSGI+ + + +H
Sbjct: 12 SGQVIVDLTSVIKELVENSLDAGATSIEVRFRNSGLDLIEVQDNGSGIAPENYENVALKH 71
Query: 76 AATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIIT-KAHGRPNGYRKVMKGS-K 133
TSKL + DD + TFGFRGEAL+S+ +S I T +A+ P R + S K
Sbjct: 72 Y-TSKL---SSYDDLLHLQTFGFRGEALSSLCALSDFRITTAQANQAPRATRLEFEQSGK 127
Query: 134 CLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKVSF 193
+ +K GT LF PVRR+ ++ + K+ V + A + V F
Sbjct: 128 LRKTEVVAGQK--GTVASVESLFRKLPVRRRELEKNIKREYGKVLNLLHAYACISTGVRF 185
Score = 135 (52.6 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 52/202 (25%), Positives = 90/202 (44%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L +IDQHA+DE+I E L+ + V + V EI +++N K+ G
Sbjct: 793 LFIIDQHASDEKINFERLQSTTTVQNQRLVHPKRLDLTAVEEEI---VIENQVILEKN-G 848
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1305
++ ++ G + + +LL L+ +F V DL E + L +T +T
Sbjct: 849 FVVDVDDSGDKPIGQRCSLLSLP------LSKEVVFDVR----DLEELIAILTETSTPNT 898
Query: 1306 T--------PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT 1357
T P V ++ +ACR +IM G +L + +V ++ + C HGRPT
Sbjct: 899 TGPEIDIPRPSKVRKMFAMRACRSSIMIGKTLTQRQMERVVRDMGTIDKPWNCPHGRPTM 958
Query: 1358 VPLVNLEA--LHKQIAQLNNSS 1377
L +L + + A ++N+S
Sbjct: 959 RHLFSLGRWEVWDEYADIHNAS 980
Score = 53 (23.7 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 239 LEISGYISSPY--DSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 288
+++ G+IS P + Q +++NSR I K +N + SF+ + S
Sbjct: 249 IQVRGHISRPVFGEGRQTPDRQMLFVNSRPCALPQITKAINEVYKSFNLAQS 300
>UNIPROTKB|Q5AZG4 [details] [associations]
symbol:AN6316.2 "ATP-binding protein (Eurofung)"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 192 (72.6 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 63/180 (35%), Positives = 92/180 (51%)
Query: 17 SGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLLGERH 75
SG V+ DLT V++ELV NS+DAGAT + V ++V D+GSGI+ + + +H
Sbjct: 12 SGQVIVDLTSVIKELVENSLDAGATSIEVRFRNSGLDLIEVQDNGSGIAPENYENVALKH 71
Query: 76 AATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIIT-KAHGRPNGYRKVMKGS-K 133
TSKL + DD + TFGFRGEAL+S+ +S I T +A+ P R + S K
Sbjct: 72 Y-TSKL---SSYDDLLHLQTFGFRGEALSSLCALSDFRITTAQANQAPRATRLEFEQSGK 127
Query: 134 CLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKVSF 193
+ +K GT LF PVRR+ ++ + K+ V + A + V F
Sbjct: 128 LRKTEVVAGQK--GTVASVESLFRKLPVRRRELEKNIKREYGKVLNLLHAYACISTGVRF 185
Score = 135 (52.6 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 52/202 (25%), Positives = 90/202 (44%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L +IDQHA+DE+I E L+ + V + V EI +++N K+ G
Sbjct: 793 LFIIDQHASDEKINFERLQSTTTVQNQRLVHPKRLDLTAVEEEI---VIENQVILEKN-G 848
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1305
++ ++ G + + +LL L+ +F V DL E + L +T +T
Sbjct: 849 FVVDVDDSGDKPIGQRCSLLSLP------LSKEVVFDVR----DLEELIAILTETSTPNT 898
Query: 1306 T--------PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT 1357
T P V ++ +ACR +IM G +L + +V ++ + C HGRPT
Sbjct: 899 TGPEIDIPRPSKVRKMFAMRACRSSIMIGKTLTQRQMERVVRDMGTIDKPWNCPHGRPTM 958
Query: 1358 VPLVNLEA--LHKQIAQLNNSS 1377
L +L + + A ++N+S
Sbjct: 959 RHLFSLGRWEVWDEYADIHNAS 980
Score = 53 (23.7 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 239 LEISGYISSPY--DSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 288
+++ G+IS P + Q +++NSR I K +N + SF+ + S
Sbjct: 249 IQVRGHISRPVFGEGRQTPDRQMLFVNSRPCALPQITKAINEVYKSFNLAQS 300
>UNIPROTKB|Q755U7 [details] [associations]
symbol:AER421W "AER421Wp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003697 "single-stranded DNA binding" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 EMBL:AE016818
GenomeReviews:AE016818_GR GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
OrthoDB:EOG4FFH9B RefSeq:NP_985276.1 ProteinModelPortal:Q755U7
STRING:Q755U7 EnsemblFungi:AAS53100 GeneID:4621495
KEGG:ago:AGOS_AER421W PhylomeDB:Q755U7 Uniprot:Q755U7
Length = 903
Score = 207 (77.9 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 93/348 (26%), Positives = 148/348 (42%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDG 60
G IN + +A + + SG V+ DL V+E+V NS+DA A K+ + ++ D+G
Sbjct: 3 GKINAINQADVHRITSGQVIIDLVAAVKEVVENSLDAHADKLEITFRNYGLEAIECADNG 62
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
GI L +H TSK+ + +D T + TFGFRGEALASI ++ L +IT G
Sbjct: 63 DGIPDSNFDSLALKHH-TSKI---EEFEDLTRVTTFGFRGEALASICAMASLTVITTQKG 118
Query: 121 RPNGYR-KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P ++ + + + + K GTTV R LF N PVR+K + KK
Sbjct: 119 -PKAHKLEYDSHGRLVKKTVTSRNK--GTTVQLRHLFNNMPVRKKEFVRNFKKQFGKCVT 175
Query: 180 CVLRIALVHPKVSFKFIDME---SEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNAND 236
+ AL+ ++ S+ LL T FG + L +V +
Sbjct: 176 LLQSYALLSENCRLSIFNVNAAGSKSLLLSTPGRNDISKNILTVFGSDGMHGLQKVGLH- 234
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
L+++ Y S + + R G I + ASF C S K
Sbjct: 235 --LDLNEYKEKMLKKYSEDS-TLDDADHRIAVTGYISR------ASFGCGRSGKDRQFIY 285
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIE 344
KR Y L+C + +Y +F+ ++ V+ ++E F++
Sbjct: 286 INKRPVD-----YPQVLKCCNDIYR-SFNNVQYPVIILNFELSPQFVD 327
Score = 127 (49.8 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 53/223 (23%), Positives = 92/223 (41%)
Query: 1149 LTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGT----LAVIDQHAADERIRLEELR 1204
+ E ++ +++K ++ ++ Q + FI V L ++DQHA+DE+ E L+
Sbjct: 686 INAENYLTLTVSKRDFKEMSIIGQFNLGFIIVARRAENKHDLFIVDQHASDEKYNFENLQ 745
Query: 1205 HKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNL 1264
+ + L E V+ E+ +L+N K+ F +N
Sbjct: 746 KSTVFNSQHLIKPLTVELS-VIDEL--LVLENLPLFKKN-------------GFKIRVNE 789
Query: 1265 LQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG---SSTTPPSVLRVLNSKACRG 1321
Q+Q + I L +P D E L L + DG +S + + +ACR
Sbjct: 790 AQKQGSRIELTGMPTSKQTIFDIEDFYELLSLLKECDGVNKNSIACSKIRSMFAMRACRM 849
Query: 1322 AIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
+IM G L +V +L + + C HGRPT L+ L+
Sbjct: 850 SIMIGKPLTRRTMTEVVRKLSELDKPWNCPHGRPTMRHLMELK 892
Score = 52 (23.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 26/99 (26%), Positives = 41/99 (41%)
Query: 547 IDRHAWTIESSRFQYHQ-----SSPHLYSSPLENLSKEGDHLFREECERITFGEFEKHTP 601
+D+HA + E F+ Q +S HL LS + L E F+
Sbjct: 730 VDQHA-SDEKYNFENLQKSTVFNSQHLIKPLTVELSVIDELLVLENLPLFKKNGFKIRVN 788
Query: 602 ELKEENSKRELVSQPKYSSKLLDCP-FAECLSPVLRKID 639
E +++ S+ EL P + D F E LS +L++ D
Sbjct: 789 EAQKQGSRIELTGMPTSKQTIFDIEDFYELLS-LLKECD 826
Score = 40 (19.1 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 947 PCNKFSREHSDVPFDKT 963
PCN S E+ D F T
Sbjct: 601 PCNSCSAENEDSTFGGT 617
Score = 38 (18.4 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 827 PFTKETNF-LSDSIEPVGN-SVSDYKALNSVWCSKISDPFPQGA 868
P +K+T F + D E + D NS+ CSKI F A
Sbjct: 803 PTSKQTIFDIEDFYELLSLLKECDGVNKNSIACSKIRSMFAMRA 846
>UNIPROTKB|F1PNW0 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K10858
GeneTree:ENSGT00530000063289 CTD:5395 EMBL:AAEX03004285
RefSeq:XP_536879.3 Ensembl:ENSCAFT00000024713 GeneID:479751
KEGG:cfa:479751 Uniprot:F1PNW0
Length = 866
Score = 193 (73.0 bits), Expect = 3.9e-19, Sum P(4) = 3.9e-19
Identities = 62/178 (34%), Positives = 91/178 (51%)
Query: 17 SGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLLGERH 75
SG V+ L+ V+ELV NSVDAGAT + + + +++V D+G G+ + L +H
Sbjct: 28 SGQVVLSLSTAVKELVENSVDAGATNIDLKLKDYGVDFIEVSDNGCGVKEENFEGLTLKH 87
Query: 76 AATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKGSKCL 135
TSK+ AD+ T + TFGFRGEAL+S+ +S + I T G R + +
Sbjct: 88 H-TSKIQDFADL---TQVETFGFRGEALSSLCALSDVTISTCHTSAKVGTRLAFDHNGKI 143
Query: 136 YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK-------VLHSVKKCVLRIAL 186
R GTTV + LFY PVR K Q + KK VLH+ C++ + +
Sbjct: 144 VQKTPHPRPR-GTTVSVQQLFYTLPVRHKEFQRNIKKEYAKMVQVLHAY--CIISVGI 198
Score = 148 (57.2 bits), Expect = 3.9e-19, Sum P(4) = 3.9e-19
Identities = 54/208 (25%), Positives = 98/208 (47%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I+K+ + +++ Q + FI + ++DQHA DE+ E L+ + +G+ L
Sbjct: 672 ISKTMFAEMEIIGQFNLGFIITKLKADIFIVDQHATDEKYNFEMLQQHTVL-QGQR---L 727
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
A Q L L + +L E + G+ I +G+ + + I++ T +
Sbjct: 728 IAPQTLNLTAVNEAILIENLEIFRKNGFDFVID-EGAPVTER-----AKLISLPT--SKN 779
Query: 1279 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1338
FG D+D L F+ L+D+ G P V ++ S+ACR ++M G +L SE ++
Sbjct: 780 WTFGPQ--DIDELIFM--LSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLI 835
Query: 1339 EELKQTSLCFQCAHGRPTTVPLVNLEAL 1366
+ + + C HGRPT + NL+ +
Sbjct: 836 THMGEMDHPWNCPHGRPTMRHIANLDVI 863
Score = 39 (18.8 bits), Expect = 3.9e-19, Sum P(4) = 3.9e-19
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 319 PFIVLNISVDSECIDINVTPDKRQILLQEEKLLLAVLKTSL 359
Score = 38 (18.4 bits), Expect = 3.9e-19, Sum P(4) = 3.9e-19
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 578 KEGDHLFREECERITFGEFEKHTPELKEENSK 609
+EG+ R+ +I GE + EL++E SK
Sbjct: 643 REGEQNCRKFRAKICPGENQAAEDELRKEISK 674
>UNIPROTKB|F1PNU2 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:TINECED
GeneTree:ENSGT00530000063289 EMBL:AAEX03004285
Ensembl:ENSCAFT00000024721 Uniprot:F1PNU2
Length = 897
Score = 193 (73.0 bits), Expect = 4.7e-19, Sum P(4) = 4.7e-19
Identities = 62/178 (34%), Positives = 91/178 (51%)
Query: 17 SGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLLGERH 75
SG V+ L+ V+ELV NSVDAGAT + + + +++V D+G G+ + L +H
Sbjct: 59 SGQVVLSLSTAVKELVENSVDAGATNIDLKLKDYGVDFIEVSDNGCGVKEENFEGLTLKH 118
Query: 76 AATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKGSKCL 135
TSK+ AD+ T + TFGFRGEAL+S+ +S + I T G R + +
Sbjct: 119 H-TSKIQDFADL---TQVETFGFRGEALSSLCALSDVTISTCHTSAKVGTRLAFDHNGKI 174
Query: 136 YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK-------VLHSVKKCVLRIAL 186
R GTTV + LFY PVR K Q + KK VLH+ C++ + +
Sbjct: 175 VQKTPHPRPR-GTTVSVQQLFYTLPVRHKEFQRNIKKEYAKMVQVLHAY--CIISVGI 229
Score = 148 (57.2 bits), Expect = 4.7e-19, Sum P(4) = 4.7e-19
Identities = 54/208 (25%), Positives = 98/208 (47%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I+K+ + +++ Q + FI + ++DQHA DE+ E L+ + +G+ L
Sbjct: 703 ISKTMFAEMEIIGQFNLGFIITKLKADIFIVDQHATDEKYNFEMLQQHTVL-QGQR---L 758
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
A Q L L + +L E + G+ I +G+ + + I++ T +
Sbjct: 759 IAPQTLNLTAVNEAILIENLEIFRKNGFDFVID-EGAPVTER-----AKLISLPT--SKN 810
Query: 1279 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1338
FG D+D L F+ L+D+ G P V ++ S+ACR ++M G +L SE ++
Sbjct: 811 WTFGPQ--DIDELIFM--LSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLI 866
Query: 1339 EELKQTSLCFQCAHGRPTTVPLVNLEAL 1366
+ + + C HGRPT + NL+ +
Sbjct: 867 THMGEMDHPWNCPHGRPTMRHIANLDVI 894
Score = 39 (18.8 bits), Expect = 4.7e-19, Sum P(4) = 4.7e-19
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 350 PFIVLNISVDSECIDINVTPDKRQILLQEEKLLLAVLKTSL 390
Score = 38 (18.4 bits), Expect = 4.7e-19, Sum P(4) = 4.7e-19
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 578 KEGDHLFREECERITFGEFEKHTPELKEENSK 609
+EG+ R+ +I GE + EL++E SK
Sbjct: 674 REGEQNCRKFRAKICPGENQAAEDELRKEISK 705
>UNIPROTKB|P54278 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032407 "MutSalpha complex binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0006298 "mismatch repair" evidence=IDA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0042493 GO:GO:0016887 GO:GO:0006298 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 EMBL:AC005995
MIM:276300 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 Orphanet:144 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
HOGENOM:HOG000165474 OMA:LDKPWNC HPA:CAB010235 EMBL:U13696
EMBL:AB103082 EMBL:AB103083 EMBL:AB103085 EMBL:U14658 EMBL:AK312390
EMBL:BC093921 IPI:IPI00418329 IPI:IPI00746337 IPI:IPI00873034
IPI:IPI00874088 PIR:S47598 RefSeq:NP_000526.1 UniGene:Hs.632637
PDB:1EA6 PDB:1H7S PDB:1H7U PDBsum:1EA6 PDBsum:1H7S PDBsum:1H7U
ProteinModelPortal:P54278 SMR:P54278 DIP:DIP-27602N IntAct:P54278
MINT:MINT-2804140 STRING:P54278 PhosphoSite:P54278 DMDM:1709685
SWISS-2DPAGE:P54278 PRIDE:P54278 Ensembl:ENST00000265849
Ensembl:ENST00000382321 Ensembl:ENST00000406569 GeneID:5395
KEGG:hsa:5395 UCSC:uc003spk.3 UCSC:uc010kte.3 UCSC:uc010ktf.2
CTD:5395 GeneCards:GC07M005979 HGNC:HGNC:9122 MIM:600259 MIM:614337
neXtProt:NX_P54278 PharmGKB:PA33448 HOVERGEN:HBG008219
InParanoid:P54278 PhylomeDB:P54278 EvolutionaryTrace:P54278
GenomeRNAi:5395 NextBio:20918 ArrayExpress:P54278 Bgee:P54278
CleanEx:HS_PMS2 Genevestigator:P54278 GermOnline:ENSG00000122512
Uniprot:P54278
Length = 862
Score = 178 (67.7 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 55/157 (35%), Positives = 81/157 (51%)
Query: 17 SGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLLGERH 75
SG V+ L+ V+ELV NS+DAGAT + + + ++V D+G G+ + L +H
Sbjct: 28 SGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKH 87
Query: 76 AATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKGSKCL 135
TSK+ AD+ T + TFGFRGEAL+S+ +S + I T H ++M
Sbjct: 88 H-TSKIQEFADL---TQVETFGFRGEALSSLCALSDVTIST-CHASAKVGTRLMFDHNGK 142
Query: 136 YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK 172
+ + GTTV + LF PVR K Q + KK
Sbjct: 143 IIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKK 179
Score = 150 (57.9 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 54/205 (26%), Positives = 94/205 (45%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I+K+ + +++ Q + FI + ++DQHA DE+ E L+ + +G+ L
Sbjct: 668 ISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVL-QGQR---L 723
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
A Q L L + +L E + G+ I ++N + +R + +
Sbjct: 724 IAPQTLNLTAVNEAVLIENLEIFRKNGFDFVI--------DENAPVTERAKLISLPTSKN 775
Query: 1279 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1338
FG DVD L F+ L+D+ G P V ++ S+ACR ++M G +L SE ++
Sbjct: 776 WTFGPQ--DVDELIFM--LSDSPGVMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLI 831
Query: 1339 EELKQTSLCFQCAHGRPTTVPLVNL 1363
+ + + C HGRPT + NL
Sbjct: 832 THMGEMDHPWNCPHGRPTMRHIANL 856
Score = 44 (20.5 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 35/144 (24%), Positives = 58/144 (40%)
Query: 483 ENLKKEGDHLFRKECERITFGDAEKDPAELQEENT-----EMEYVPQPKYSFGLSDGSFA 537
E + EG+ +RK +I G+ + EL++E + EME + Q ++ G
Sbjct: 635 EAQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQ--FNLGFIITKLN 692
Query: 538 KCLPIVPWKIDRHAWTIESSRF---QYHQ--SSPHLYSSPLENLSKEGDHLFREECERIT 592
+ + IV D+HA T E F Q H L + NL+ + + E E
Sbjct: 693 EDIFIV----DQHA-TDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFR 747
Query: 593 FGEFEKHTPELKEENSKRELVSQP 616
F+ E + +L+S P
Sbjct: 748 KNGFDFVIDENAPVTERAKLISLP 771
Score = 41 (19.5 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 15/66 (22%), Positives = 32/66 (48%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVDMLE 366
P +LN+ D+ P K ++ ++ + +LA ++ ++ + DS DV+ L
Sbjct: 319 PFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF------DS-DVNKLN 371
Query: 367 DAELPL 372
++ PL
Sbjct: 372 VSQQPL 377
>UNIPROTKB|O67518 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224324 "Aquifex aeolicus VF5" [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE000657
GenomeReviews:AE000657_GR eggNOG:COG0323 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GO:GO:0032300 PIR:D70436
RefSeq:NP_214083.1 ProteinModelPortal:O67518 GeneID:1193141
KEGG:aae:aq_1578 PATRIC:20960208 HOGENOM:HOG000256552 OMA:MVLFIND
ProtClustDB:CLSK2748471 BioCyc:AAEO224324:GJBH-1125-MONOMER
Uniprot:O67518
Length = 425
Score = 228 (85.3 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 75/197 (38%), Positives = 106/197 (53%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
+ LP VR + +G V+ VV+ELV NS+DA ATKV V V ++V D+G+G
Sbjct: 3 VKLLPPEVRKVIAAGEVIESPVDVVKELVENSLDAKATKVEVEIVKGGKRLIRVKDNGTG 62
Query: 63 ISRDGL--VLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
I + + V+L ATSK+ D+ I T+GFRGEAL SIS VS ++ ++
Sbjct: 63 IHPEDVEKVVL---QGATSKIETEKDL---MNISTYGFRGEALYSISSVSKFKLRSRFFQ 116
Query: 121 RPNGYR-KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSP---KKVLHS 176
G +V G+ LG VGT V RDLF+N PVRRK+++ +KVL
Sbjct: 117 EKEGKEIEVEAGN---ILGTRRVGMPVGTEVEVRDLFFNLPVRRKFLKKEDTERRKVLEL 173
Query: 177 VKKCVLRIALVHPKVSF 193
+K+ AL +P+V F
Sbjct: 174 IKE----YALTNPEVEF 186
Score = 71 (30.1 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLS 1209
++L Q+D+ FI V L +DQH +ERI E+L+ + L+
Sbjct: 329 EILGQMDETFILVKDSEYLYFVDQHLLEERINYEKLKDENLA 370
Score = 48 (22.0 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 1318 ACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT--TVPL 1360
ACR ++ G L + +++ + C HGRP +PL
Sbjct: 370 ACRISVKAGQKLSEEKIRELIKTWRNLENPHVCPHGRPIYYKIPL 414
>UNIPROTKB|Q7NL47 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:251221 "Gloeobacter violaceus PCC 7421" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:BA000045 GenomeReviews:BA000045_GR HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0032300 KO:K03572 ProtClustDB:PRK00095 RefSeq:NP_924225.1
ProteinModelPortal:Q7NL47 GeneID:2598842 KEGG:gvi:gvip188
PATRIC:22041969 OMA:NTHKAIN BioCyc:GVIO251221:GH9A-1330-MONOMER
Uniprot:Q7NL47
Length = 573
Score = 208 (78.3 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 80/276 (28%), Positives = 122/276 (44%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
+G I L + + +G V+ VV ELV NS+DAGA ++ V + V+V D+G
Sbjct: 43 LGAIRPLADQTVRLLAAGEVIDSPAAVVRELVDNSLDAGADRIRVSFWPESWRVQVQDNG 102
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
G + L + HA TSKLG + D+ + T GFRGE L SI+ V+ LEI+T
Sbjct: 103 LGFEAEELPMAARSHA-TSKLGAIEDL---WRLRTLGFRGEGLHSIAVVARLEILTCTPT 158
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
R K + GT V +LF QPVRR+++ + +V +V +
Sbjct: 159 ARTATR-ARYDHKGELVESQPAAAAPGTVVTVSELFELQPVRRRFLADTKAQV-RAVTQL 216
Query: 181 VLRIALVHPKVSFKF-IDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGAL 239
V R AL +P F+ +D + +L + D L EV+
Sbjct: 217 VHRYALAYPGHLFELAVDGRLQLQLWAAPGLKQRALQLLNSYDEHD---LREVHLERDGR 273
Query: 240 EISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHK 274
+ I P +A + +YIN R+V G + +
Sbjct: 274 RVRLAIGLPDRCSRARADWLQIYINGRFVRHGELEQ 309
Score = 83 (34.3 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 1288 VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1347
VD E L +LAD + ++ +R S CR AI G +L P + +++ ++T
Sbjct: 490 VDCAEGLMELADQEDAAQ-----MRAALS--CRTAIRNGTALSPLQMQQLLDRWQRTRNP 542
Query: 1348 FQCAHGRPTTVPLVNLE 1364
C HGRP +PL + E
Sbjct: 543 HTCPHGRPIYMPLTDGE 559
Score = 64 (27.6 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRH--KVLSGEGKSVAYLDAEQELV 1225
K L Q+ + +I G + +++QH A ER+ E L +V+ E L + Q
Sbjct: 402 KALAQLHQTYILAEYPGGVCLVEQHVAHERVLFEALESDWQVVPLEPPLALELSSRQAQN 461
Query: 1226 LPEIGYQLLQNFAEQIKDW 1244
L E G ++ + F E + W
Sbjct: 462 LTEHGIEV-EAFGE--RSW 477
>UNIPROTKB|Q755L3 [details] [associations]
symbol:AFL199C "AFL199Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005739 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
EMBL:AE016819 GenomeReviews:AE016819_GR HSSP:P23367 KO:K08734
OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 HOGENOM:HOG000176000 OrthoDB:EOG43XZBN
GO:GO:0000713 GO:GO:0000710 GO:GO:0032139 GO:GO:0000404
RefSeq:NP_985351.1 ProteinModelPortal:Q755L3 STRING:Q755L3
EnsemblFungi:AAS53175 GeneID:4621576 KEGG:ago:AGOS_AFL199C
PhylomeDB:Q755L3 Uniprot:Q755L3
Length = 771
Score = 263 (97.6 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 86/286 (30%), Positives = 139/286 (48%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I L +V N + +G ++ ++E++ NS+DAGAT V + V +++ D+G G
Sbjct: 49 IKALEASVVNKIAAGEIIISPVNALKEMMENSIDAGATNVDILVKDGGIKMLQISDNGCG 108
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L +L ER TSKL +D + I T+GFRGEALASIS ++ L ++TK
Sbjct: 109 IMKDDLPILCERFT-TSKL---KSFEDLSRIQTYGFRGEALASISHIARLHVVTKTKENQ 164
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ V + + KD GTT++ +DLFYN P R + ++S P + + V
Sbjct: 165 CAWKAVYENGVMVGEPKPTAGKD-GTTILVQDLFYNVPSRLRALRS-PSEEFAKIVDVVG 222
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNAN-D---GA 238
+ A+ V F L FG + L EV+ + D G
Sbjct: 223 KYAIHSDGVGFSCKKFGETQYALNVRGTSSKSDKIRAVFGAPVVANLVEVDISADPEHGL 282
Query: 239 LEISGYISSPYDSISVKAFQYVY-INSRYVCKGPIHKLLNHLAASF 283
SG I++P D + K+ V+ IN+R V P+ + L+ + ++F
Sbjct: 283 TSSSGQITTP-DFNNKKSIPAVFFINNRLVSCDPLRRALSQVYSNF 327
Score = 47 (21.6 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 28/108 (25%), Positives = 47/108 (43%)
Query: 1200 LEELRHKVLSGEGKSVAYL---DAEQELVLPEIGYQLLQNFAEQIKDWGWICN--IHTQG 1254
++E HK L+ + Y+ DA + L + G +L + D+G +CN + G
Sbjct: 525 VDEDMHKELTSVFADMTYVGVVDATRRLASIQHGLKLF------LVDYGSLCNELFYQIG 578
Query: 1255 SRSF-NKNLNLLQRQITVITLLAVPCIFGV--NLSDVDLLEFLQQLAD 1299
F N +Q ++ LA+ + N S ++LE QQL D
Sbjct: 579 LTDFANFGKIYIQDEVENREGLAIYQLLSKIDNASQSNILEITQQLWD 626
>SGD|S000005026 [details] [associations]
symbol:PMS1 "ATP-binding protein involved in mismatch repair"
species:4932 "Saccharomyces cerevisiae" [GO:0016887 "ATPase
activity" evidence=IMP;IDA] [GO:0032389 "MutLalpha complex"
evidence=IEA;IPI] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0000710 "meiotic mismatch repair" evidence=IMP] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0032135 "DNA insertion or deletion
binding" evidence=IDA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA;IMP]
[GO:0006298 "mismatch repair" evidence=IEA;IMP] [GO:0000404 "loop
DNA binding" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
SGD:S000005026 Prosite:PS00058 GO:GO:0005524 GO:GO:0005737
EMBL:BK006947 GO:GO:0016887 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:DQ115393 GO:GO:0030983 EMBL:X86470 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
EMBL:X89016 eggNOG:COG0323 EMBL:AF458969 EMBL:AF458971
EMBL:AF458973 EMBL:AF458974 EMBL:AF458976 EMBL:AF458977 KO:K14561
RefSeq:NP_014324.3 GeneID:855649 KEGG:sce:YNL075W GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0000710 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
OrthoDB:EOG4FFH9B EMBL:M29688 EMBL:DQ356628 EMBL:DQ356629
EMBL:DQ356630 EMBL:DQ356631 EMBL:DQ356632 EMBL:Z71357 EMBL:Z71358
PIR:S53896 RefSeq:NP_014317.4 PDB:3H4L PDBsum:3H4L
ProteinModelPortal:P14242 SMR:P14242 DIP:DIP-2416N IntAct:P14242
MINT:MINT-625253 STRING:P14242 PaxDb:P14242 PeptideAtlas:P14242
EnsemblFungi:YNL082W GeneID:855642 KEGG:sce:YNL082W CYGD:YNL082w
GeneTree:ENSGT00530000063289 EvolutionaryTrace:P14242
NextBio:979872 Genevestigator:P14242 GermOnline:YNL082W
Uniprot:P14242
Length = 873
Score = 198 (74.8 bits), Expect = 9.1e-18, Sum P(2) = 9.1e-18
Identities = 90/355 (25%), Positives = 148/355 (41%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDD 59
M I+++ + + + SG V+ DLT V+ELV NS+DA A ++ ++ ++ D+
Sbjct: 1 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI L +H TSK+ A D + T GFRGEAL+S+ ++ L +IT
Sbjct: 61 GDGIDPSNYEFLALKHY-TSKI---AKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTS 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P K+ ++ GTTV+ LF+N PVR+K + K+
Sbjct: 117 --PPKADKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLT 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDE---LLCTCXXXXXXXXXXXXFGIEDFSFLDEVNA-- 234
+ A+++ + F ++ + + +L T FG L+EV+
Sbjct: 175 VIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVL 234
Query: 235 --NDGALEISG-YISSP--YD-SISVKAFQYVYINSRYVCKGPIHKLLNHLAAS---FDC 285
N + G Y P D ++ Y+ NS + C G K + + +
Sbjct: 235 DLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNS-FGC-GRNSKDRQFIYVNKRPVEY 292
Query: 286 SDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVL 340
S K N K + PA LNL P SL D+ P K ++ + V+
Sbjct: 293 STLLKCCNEVYK--TFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVI 345
Score = 113 (44.8 bits), Expect = 9.1e-18, Sum P(2) = 9.1e-18
Identities = 55/234 (23%), Positives = 97/234 (41%)
Query: 1136 QDNILDISSGLLHLT-GEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGT----LAVID 1190
Q+NI+ L GE ++ +++K+ + +V+ Q + FI V L ++D
Sbjct: 642 QENIIKNKDELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVD 701
Query: 1191 QHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNI 1250
QHA+DE+ E L+ + K + E V+ E+ +L N K+ G+ I
Sbjct: 702 QHASDEKYNFETLQAVTVFKSQKLIIPQPVELS-VIDEL--VVLDNLPVFEKN-GFKLKI 757
Query: 1251 HTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDV-DLLEFLQQLADTDGSSTTPPS 1309
+ F + LL + TL +L D +L+ +++ +
Sbjct: 758 DEE--EEFGSRVKLLSLPTSKQTLF--------DLGDFNELIHLIKEDGGLRRDNIRCSK 807
Query: 1310 VLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
+ + +ACR +IM G L +V L + + C HGRPT L+ L
Sbjct: 808 IRSMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPWNCPHGRPTMRHLMEL 861
>UNIPROTKB|G3V3E0 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0000795 "synaptonemal
complex" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 Pfam:PF02518 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0008104 GO:GO:0003682
GO:GO:0006298 GO:GO:0019237 GO:GO:0001673 EMBL:AL049780
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
GO:GO:0007130 GO:GO:0007144 GO:GO:0000795 GO:GO:0005712
InterPro:IPR014762 PANTHER:PTHR10073 HGNC:HGNC:7128 ChiTaRS:MLH3
ProteinModelPortal:G3V3E0 SMR:G3V3E0 Ensembl:ENST00000553263
ArrayExpress:G3V3E0 Bgee:G3V3E0 Uniprot:G3V3E0
Length = 162
Score = 224 (83.9 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 63/165 (38%), Positives = 91/165 (55%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYF-TSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYM 166
+ K+ + K L D R GTTV +LFY PVRRK M
Sbjct: 118 KTFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM 162
>UNIPROTKB|Q3KLC2 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:315277 "Chlamydia trachomatis A/HAR-13" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000051 GenomeReviews:CP000051_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
ProtClustDB:PRK00095 RefSeq:YP_328398.1 ProteinModelPortal:Q3KLC2
STRING:Q3KLC2 GeneID:3687613 KEGG:cta:CTA_0625 PATRIC:32023166
OMA:RRGFQKS BioCyc:CTRA315277:GI4C-650-MONOMER Uniprot:Q3KLC2
Length = 576
Score = 250 (93.1 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 77/267 (28%), Positives = 133/267 (49%)
Query: 6 RLPEAVR-NTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVY-VGVCNCYVKVVDDGSGI 63
RL ++V N + +G V+ + VV+EL+ NS+DAGA ++ + +G + V D+G G+
Sbjct: 9 RLLDSVTVNQISAGEVIENAASVVKELIENSLDAGADEIHIETLGGGRGQIVVRDNGVGM 68
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 123
+ + + +RHA TSK+ H AD+ + ++GFRGEAL SI+ +S +EI T G
Sbjct: 69 DPEEVPVALQRHA-TSKIAHFADI---FSLASYGFRGEALPSIASISKMEIHTARAGGLG 124
Query: 124 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 183
+ KG + + GTT+ LFYN P+R+ + Q SP+ ++++ +
Sbjct: 125 SKTLIEKGEPVC---CEPAPRQQGTTIAVHSLFYNVPMRQSF-QKSPQMDRLAIRRLLEN 180
Query: 184 IALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFG---IEDFSFLDEVNANDGALE 240
L + + +I E EL G +++ F+D+ G L
Sbjct: 181 SVLSSEGIGWTWIS-ECRQELY-VAKKQGFIERVALVLGESFVQEAFFIDK---QQGDLR 235
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYV 267
+ G++ SP S + Q ++IN+R V
Sbjct: 236 VLGFLGSPNQHRSTRQGQRLFINNRAV 262
Score = 46 (21.3 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 16/72 (22%), Positives = 29/72 (40%)
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
+Q P ++L L P D P KT V + + AI A +++ V
Sbjct: 281 AQRYPIFVLKLFLPPMWCDFNVHPQKTEVRLLQEGQISNLLVEAISEALLRRSPSLEETV 340
Query: 363 DMLEDAELPLES 374
+ ++P+E+
Sbjct: 341 LKVPTEKIPIEN 352
>UNIPROTKB|A8HM54 [details] [associations]
symbol:MLH1 "Mismatch repair protein" species:3055
"Chlamydomonas reinhardtii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 EMBL:DS496108
GO:GO:0000795 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 RefSeq:XP_001690102.1
ProteinModelPortal:A8HM54 STRING:A8HM54 EnsemblPlants:EDP09840
GeneID:5715471 KEGG:cre:CHLREDRAFT_146633 OMA:NDEENNT
ProtClustDB:CLSN2920798 Uniprot:A8HM54
Length = 1007
Score = 254 (94.5 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 65/170 (38%), Positives = 95/170 (55%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I +L E V N + +G V+ ++E++ NS+DAG+T++ V V N +++ D+GSG
Sbjct: 39 IRKLDENVVNKIAAGEVIQRPASALKEMLENSLDAGSTQISVTVKDGGNKLLQITDNGSG 98
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ L +L RH TSKL D++ I T GFRGEAL SIS VS + + T A
Sbjct: 99 IRKEDLAILCHRHT-TSKLSQFEDLET---ISTLGFRGEALCSISFVSHMAVTTMARDAQ 154
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK 172
G+R K S G GTT+ DLFYN P RRK ++S+ ++
Sbjct: 155 YGFRVTYKDSAMEAPGPKPVAAVPGTTITVEDLFYNVPTRRKALKSASEE 204
Score = 47 (21.6 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 16/66 (24%), Positives = 26/66 (39%)
Query: 284 DCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 343
+C+ +A G K+ P L+LR P ++ P K V F V+ I
Sbjct: 313 ECAPLRRALEGVYAALLPKASK-PWLFLDLRLPPRQVEVNMHPTKREVGFMHQAEVIEVI 371
Query: 344 ERAIRS 349
A+ +
Sbjct: 372 RGAVEA 377
Score = 40 (19.1 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF--DCSDSW 289
+++ G IS K ++IN R V P+ + L + A+ S W
Sbjct: 284 IKLEGLISGANYGSGKKTVLVLFINGRCVECAPLRRALEGVYAALLPKASKPW 336
>FB|FBgn0011660 [details] [associations]
symbol:Pms2 "Pms2" species:7227 "Drosophila melanogaster"
[GO:0006298 "mismatch repair" evidence=ISS;IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0016887 "ATPase
activity" evidence=IBA] [GO:0032407 "MutSalpha complex binding"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 EMBL:AE013599 GO:GO:0005524
GO:GO:0005875 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
KO:K10858 GeneTree:ENSGT00530000063289 CTD:5395 RefSeq:NP_477023.1
UniGene:Dm.4816 ProteinModelPortal:A1ZA03 SMR:A1ZA03 STRING:A1ZA03
PaxDb:A1ZA03 PRIDE:A1ZA03 EnsemblMetazoa:FBtr0087388 GeneID:36705
KEGG:dme:Dmel_CG8169 UCSC:CG8169-RA FlyBase:FBgn0011660
InParanoid:A1ZA03 OMA:GQGKRST OrthoDB:EOG4FJ6QW PhylomeDB:A1ZA03
GenomeRNAi:36705 NextBio:799969 Bgee:A1ZA03 Uniprot:A1ZA03
Length = 899
Score = 178 (67.7 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 60/179 (33%), Positives = 91/179 (50%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDG 60
G I + + + + SG V+ L V+ELV NS+DAGAT V + + V+V D+G
Sbjct: 25 GQIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNG 84
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
SG+ L + ++ TSK+ D+ G+ TFGFRGEAL+S+ +S + I T+
Sbjct: 85 SGVEEMNLEGMTAKYH-TSKIREFVDL---LGVETFGFRGEALSSLCALSDMVIQTRHKS 140
Query: 121 RPNGYR-------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK 172
G + ++ K S C + VGTTV+ +LF PVRR+ + KK
Sbjct: 141 TDVGVKVELDHEGRIKKRSPCA--------RGVGTTVLLANLFSTLPVRRRDFTRNIKK 191
Score = 133 (51.9 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 53/209 (25%), Positives = 94/209 (44%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I+K +++ Q + FI V L ++DQHA DE+ E L+ + E + +A
Sbjct: 693 IDKEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQ-RTTQLEYQRLA-- 749
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
Q L L + +L N + + G+ + + + K + LL + +
Sbjct: 750 -VPQNLELTAVNEMVLLNHIDVFEKNGFKFEVDHEAPAT--KKVRLLGKPHSK------R 800
Query: 1279 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL-I 1337
FG D+D L F+ Q A +G+ P V + S+ACR ++M G +L + +
Sbjct: 801 WEFGKE--DIDELIFMLQDAP-EGTICRPSRVRAMFASRACRKSVMIGTALSRNTTMRRL 857
Query: 1338 VEELKQTSLCFQCAHGRPTTVPLVNLEAL 1366
+ ++ + + C HGRPT L+N+ L
Sbjct: 858 ITQMGEIEQPWNCPHGRPTMRHLINIAML 886
Score = 41 (19.5 bits), Expect = 3.8e-16, Sum P(4) = 3.8e-16
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 501 TFGDAEKDPAELQEENTEMEYVPQPKYSFG 530
TFG PA Q +NT + + +PK + G
Sbjct: 394 TFGQT---PATFQMQNTTIVSMLEPKTNSG 420
Score = 39 (18.8 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 413 EFQKDPVELAEENTEMEFFSQPKHSSSL 440
EF+ D + L ++ + E SQP + L
Sbjct: 575 EFKTDAMALDKQESPAELNSQPPSFTQL 602
Score = 38 (18.4 bits), Expect = 3.8e-16, Sum P(4) = 3.8e-16
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 595 EFEKHTPELKEENSKRELVSQPKYSSKL 622
EF+ L ++ S EL SQP ++L
Sbjct: 575 EFKTDAMALDKQESPAELNSQPPSFTQL 602
>CGD|CAL0005779 [details] [associations]
symbol:MLH1 species:5476 "Candida albicans" [GO:0032139
"dinucleotide insertion or deletion binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000404 "loop DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032390 "MutLbeta
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005816 "spindle pole body" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000710 "meiotic mismatch repair"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0000713 "meiotic heteroduplex formation"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 CGD:CAL0005779 Prosite:PS00058
GO:GO:0005524 GO:GO:0005634 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AACQ01000151
EMBL:AACQ01000146 eggNOG:COG0323 KO:K08734 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
RefSeq:XP_712616.1 RefSeq:XP_712766.1 ProteinModelPortal:Q59SL0
STRING:Q59SL0 GeneID:3645595 GeneID:3645758 KEGG:cal:CaO19.11638
KEGG:cal:CaO19.4162 Uniprot:Q59SL0
Length = 717
Score = 255 (94.8 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 88/295 (29%), Positives = 142/295 (48%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI RL E+V N + +G ++ ++E++ NS+DA AT + + V +++ D+G
Sbjct: 7 TIKRLDESVINKIAAGEIIIQPANALKEMLENSIDARATMIEILVKDGGLKLLQITDNGH 66
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GIS+ L LL ER A TSKL D++ I T+GFRGEALASIS +S L +ITK
Sbjct: 67 GISKIDLPLLCERFA-TSKLSKFEDLES---IATYGFRGEALASISHISRLSVITKQPNS 122
Query: 122 PNGYRKV-MKGSKCLY----LGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKK 172
Y+ M G C + E K + GT ++ DLFYN P R + ++S +
Sbjct: 123 KLAYKAYYMNGQLCSSNFKSSNTNVEPKPIAGKDGTQIIVEDLFYNIPSRLRGLKSKSDE 182
Query: 173 VLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEV 232
+ V R A+ V F + + T +G + L E+
Sbjct: 183 FA-KILDIVGRYAIHCDNVGFSCKKYGDPLQQVNTRPQMPIKERIRVVYGSAIANELLEI 241
Query: 233 N--AND--GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
+ +ND G +++SG +++ + K ++IN R V P+ + +N + + F
Sbjct: 242 DGISNDELGLVKVSGVMTNANYNNKKKIQPIIFINHRLVTCEPLKRAINAVFSYF 296
Score = 38 (18.4 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 1059 NVKPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSIIS 1113
++ +E+E+ + +ES++IL E K E K+ H+ Q SI S
Sbjct: 442 DIPEENEKEEAEGELPVESNSIL--ESPSKLE-MKIET-NHSRKQVQVNLDSIAS 492
Score = 37 (18.1 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 617 KYSSKLLDCPFAECLSPVLRKIDLH 641
+Y KL C +A L +I LH
Sbjct: 528 QYDVKLFLCDYAAMLLEFYYQIGLH 552
>UNIPROTKB|E2RBM6 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0043060 "meiotic metaphase I plate congression" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA] [GO:0032389
"MutLalpha complex" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0016446 "somatic hypermutation
of immunoglobulin genes" evidence=IEA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003697 "single-stranded
DNA binding" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IEA]
[GO:0000712 "resolution of meiotic recombination intermediates"
evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:AAEX03013477 RefSeq:XP_534219.2 Ensembl:ENSCAFT00000007703
GeneID:477019 KEGG:cfa:477019 Uniprot:E2RBM6
Length = 757
Score = 251 (93.4 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 85/286 (29%), Positives = 135/286 (47%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDG 60
G I RL E V N + +G V+ ++E++ N +DA +T + V V +++ D+G
Sbjct: 6 GVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNG 65
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
+GI ++ L ++ ER TSKL +D I T+GFRGEALASIS V+ + I TK
Sbjct: 66 TGIRKEDLDIVCERFT-TSKL---QSFEDLASISTYGFRGEALASISHVAHVTITTKTAE 121
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
YR K L + GT + DLFYN RRK +++ P + + +
Sbjct: 122 AKCAYRATYSDGK-LKAPPKPCAGNQGTQITVEDLFYNISTRRKALKN-PSEEYGKILEV 179
Query: 181 VLRIALVHPKVSFKFIDMESEDEL-LCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGAL 239
V R ++ + +SF + + E + T FG L EV D L
Sbjct: 180 VGRYSIHNSGISFS-VKKQGETVADVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTL 238
Query: 240 --EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
+++GYIS+ S+ K ++IN R V + K + + A++
Sbjct: 239 AFKMNGYISNANYSVK-KCIFLLFINHRLVESTSLRKAIETVYAAY 283
Score = 42 (19.8 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 464 ESSWFQDHQPSRHLFSPPLENLKKEGDHL 492
ES W ++ P L +E LKK+ + L
Sbjct: 595 ESGWTEEDGPKEGLAEYIVEFLKKKAEML 623
>UNIPROTKB|E1BQE0 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0000795
"synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005712 "chiasma" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=IEA] [GO:0007060
"male meiosis chromosome segregation" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA] [GO:0043060
"meiotic metaphase I plate congression" evidence=IEA] [GO:0045190
"isotype switching" evidence=IEA] [GO:0045950 "negative regulation
of mitotic recombination" evidence=IEA] [GO:0048477 "oogenesis"
evidence=IEA] [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0008630 GO:GO:0006298 GO:GO:0001673 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303
GO:GO:0045950 GO:GO:0000289 GO:GO:0000239 GO:GO:0000712
GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:AADN02001321 IPI:IPI00594951 RefSeq:XP_418828.1
UniGene:Gga.10857 ProteinModelPortal:E1BQE0
Ensembl:ENSGALT00000019702 GeneID:420729 KEGG:gga:420729
NextBio:20823604 Uniprot:E1BQE0
Length = 757
Score = 252 (93.8 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 84/285 (29%), Positives = 132/285 (46%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDG 60
G I RL EAV N + +G V+ ++E++ N +DA +T + V V ++V D+G
Sbjct: 6 GVIRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQVQDNG 65
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
GI ++ L ++ ER TSKL +D I T+GFRGEALASIS V+ + + TK
Sbjct: 66 CGIRKEDLHIVCERFT-TSKL---QKFEDLASISTYGFRGEALASISHVAHVTVTTKTAD 121
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
YR K + + GT ++ DLFYN RRK +++ P + + +
Sbjct: 122 AKCAYRASYSDGK-IKAPPKPCAGNQGTQIMVEDLFYNVNTRRKALKN-PSEEYAKILEV 179
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDG--A 238
V R A+ + +SF + T FG L EV D A
Sbjct: 180 VGRYAIHNSGISFSVKKQGDTVSDVRTLSNATTVDNIRSIFGNAVSRELIEVGCEDANLA 239
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
++ GYI++ S+ K ++IN R V + K + + A++
Sbjct: 240 FKMKGYITNANYSVK-KCIFLLFINHRLVESTALRKAIETVYAAY 283
Score = 40 (19.1 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 464 ESSWFQDHQPSRHLFSPPLENLKKEGDHL 492
ES W ++ P L +E LKK+ + L
Sbjct: 595 ESGWTEEDGPKEGLAEYIVEFLKKKTEML 623
Score = 39 (18.8 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 14/64 (21%), Positives = 24/64 (37%)
Query: 906 DYDSKLRRSNQEK----CTTARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREHSDVPFD 961
D D ++ N+++ CT R + E+ Q H+ + R+HS V
Sbjct: 478 DTDIQMEEDNRKEMTAACTPKRRIINLTSVLTLQEEISN--QSHESLQEMLRDHSFVGCV 535
Query: 962 KTDW 965
W
Sbjct: 536 SPQW 539
>ZFIN|ZDB-GENE-040426-1600 [details] [associations]
symbol:mlh1 "mutL homolog 1, colon cancer,
nonpolyposis type 2 (E. coli)" species:7955 "Danio rerio"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0005712 "chiasma" evidence=IBA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IBA] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0007141 "male
meiosis I" evidence=IMP] [GO:0043060 "meiotic metaphase I plate
congression" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0051026 "chiasma assembly" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 ZFIN:ZDB-GENE-040426-1600 GO:GO:0005524
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0007141 GO:GO:0051026 GO:GO:0000795
GO:GO:0016446 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 HOGENOM:HOG000176000 HOVERGEN:HBG006374
GO:GO:0043060 GeneTree:ENSGT00550000074923 EMBL:BX936318
IPI:IPI00614918 UniGene:Dr.77529 Ensembl:ENSDART00000133388
Uniprot:B8A6F5
Length = 725
Score = 248 (92.4 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 85/288 (29%), Positives = 135/288 (46%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDG 60
G I RL E V N + +G ++ ++E++ N +DA +T + + V + + D+G
Sbjct: 4 GVIRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKSTNIQITVKEGGLKLILIQDNG 63
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
+GI +D + ++ ER TSKL +D + I T+GFRGEALASIS V+ + I TK
Sbjct: 64 TGIRKDDMEIVCERFT-TSKL---QSFEDLSSIATYGFRGEALASISHVAHVTITTKTAD 119
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
YR K L + GT + DLFYN RRK ++S P + + +
Sbjct: 120 AKCAYRANYCDGK-LKSPPKPCAGNQGTLISVEDLFYNVSTRRKALKS-PSEEYSRIVEV 177
Query: 181 VLRIALVHPKVSFKFIDMESEDELLC---TCXXXXXXXXXXXXFGIEDFSFLDEVNANDG 237
V R A +H S K ++ + E++ T FG+ L EV D
Sbjct: 178 VSRYA-IHN--SGKSFSVKKQGEMVADVKTLPNASVLDNIRVVFGVAVSRELIEVECEDQ 234
Query: 238 --ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
A ++ GYIS+ S+ K ++IN R V + K + + ++
Sbjct: 235 KFAFKVKGYISNANYSVK-KCILILFINHRLVESSALKKAIETVYTAY 281
Score = 42 (19.8 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 19/84 (22%), Positives = 31/84 (36%)
Query: 671 VEGDLL--NSQRGYEYLQIEPGVSNGAS---GTASPLDKDEFSNEFEVSKDIKKPLRLSC 725
+E LL NS R Y + PG+S AS ++S D E ++ + K +L
Sbjct: 328 IESKLLGSNSSRTYFTQTLLPGLSASASVAKASSSSADSQERVYAHQMVRTDSKAQKLDA 387
Query: 726 XXXXXXXXXXXXXXXXEERCESST 749
E+ S++
Sbjct: 388 FLQPSASSSSTAAQRKTEKTSSTS 411
>UNIPROTKB|F1MPG0 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0045950
"negative regulation of mitotic recombination" evidence=IEA]
[GO:0045190 "isotype switching" evidence=IEA] [GO:0043060 "meiotic
metaphase I plate congression" evidence=IEA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005712 "chiasma"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IEA]
[GO:0000289 "nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA] [GO:0000239 "pachytene" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0008630 GO:GO:0048477 GO:GO:0007283 GO:GO:0006298
GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:DAAA02053630 EMBL:DAAA02053631 IPI:IPI00705361
RefSeq:NP_001069462.2 UniGene:Bt.30133 Ensembl:ENSBTAT00000022288
GeneID:533652 KEGG:bta:533652 NextBio:20876104 ArrayExpress:F1MPG0
Uniprot:F1MPG0
Length = 758
Score = 247 (92.0 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 85/286 (29%), Positives = 134/286 (46%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDG 60
G I RL E V N + +G V+ ++E++ N +DA +T + V V +++ D+G
Sbjct: 6 GVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNG 65
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
+GI ++ L ++ ER TSKL +D I T+GFRGEALASIS V+ + I TK
Sbjct: 66 TGIRKEDLEIVCERFT-TSKL---QSFEDLAHISTYGFRGEALASISHVAHVTITTKTAD 121
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
YR K L + GT + DLFYN RRK +++ P + + +
Sbjct: 122 GKCAYRAHYSDGK-LKAPPKPCAGNQGTQITVEDLFYNISTRRKALKN-PSEEYGKILEV 179
Query: 181 VLRIALVHPKVSFKFIDMESEDEL-LCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGAL 239
V R A+ + + F + + E + T FG L EV D L
Sbjct: 180 VGRYAVHNSGIGFS-VKKQGETVADVRTLPNATTVDNIRSIFGNAVSRELIEVECEDKTL 238
Query: 240 --EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
+++GYIS+ S+ K ++IN R V + K + + A++
Sbjct: 239 AFKMNGYISNANYSVK-KCIFLLFINHRLVESASLRKAIETVYAAY 283
Score = 42 (19.8 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 464 ESSWFQDHQPSRHLFSPPLENLKKEGDHL 492
ES W ++ P L +E LKK+ + L
Sbjct: 596 ESGWTEEDGPKEGLAEYIVEFLKKKAEML 624
>UNIPROTKB|Q5JN46 [details] [associations]
symbol:P0401G10.10 "Os01g0958900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008207
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 EMBL:AP003238
EMBL:AK103319 RefSeq:NP_001045457.1 UniGene:Os.10900 STRING:Q5JN46
GeneID:4325393 KEGG:osa:4325393 ProtClustDB:CLSN2690816
Uniprot:Q5JN46
Length = 724
Score = 243 (90.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 84/274 (30%), Positives = 132/274 (48%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I RL E+V N + +G V+ + V+EL+ NS+DAGA+ V V V ++V DDG G
Sbjct: 18 IRRLEESVVNRIAAGEVIQRPSSAVKELIENSLDAGASSVSVAVKDGGLKLIQVSDDGHG 77
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + L +L ERH TSKL D+ I + GFRGEALAS++ V + + T G+
Sbjct: 78 IRFEDLAILCERHT-TSKLSAYEDLQT---IKSMGFRGEALASMTYVGHVTVTTITEGQL 133
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
+GYR + +++E K GT V+ +LFYN R+K +Q+S +
Sbjct: 134 HGYRVSYRDGV-----MENEPKPCAAVKGTQVMVENLFYNMVARKKTLQNSNDDY-PKIV 187
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEV-----N 233
+ R A+ H V+F + + + +G L E+ +
Sbjct: 188 DFISRFAVHHINVTFSCRKHGANRADVHSASTSSRLDAIRSVYGASVVRDLIEIKVSYED 247
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYV 267
A D ++ GYIS+ + ++ K ++IN R V
Sbjct: 248 AADSIFKMDGYISNA-NYVAKKITMILFINDRLV 280
Score = 44 (20.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 477 LFSPPLENLKKEGDHLFRKECERITFGDAEKDPAELQEEN 516
L P L N G HL++K + + AE D + +EN
Sbjct: 626 LHPPILPNPSGNGIHLYKKNRDSMADEHAENDL--ISDEN 663
>MGI|MGI:101938 [details] [associations]
symbol:Mlh1 "mutL homolog 1 (E. coli)" species:10090 "Mus
musculus" [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IMP] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IMP] [GO:0000793 "condensed
chromosome" evidence=IDA;IMP] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0000795 "synaptonemal complex"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0002204 "somatic recombination of immunoglobulin
genes involved in immune response" evidence=IGI] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005694 "chromosome" evidence=IDA] [GO:0005712 "chiasma"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0006298
"mismatch repair" evidence=ISO;IDA;IMP] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IGI;IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IMP] [GO:0007126 "meiosis"
evidence=IDA;TAS] [GO:0007129 "synapsis" evidence=IMP] [GO:0007131
"reciprocal meiotic recombination" evidence=IMP] [GO:0007140 "male
meiosis" evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IMP] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IMP] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032137 "guanine/thymine mispair
binding" evidence=ISO;IGI] [GO:0032389 "MutLalpha complex"
evidence=IDA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0043060
"meiotic metaphase I plate congression" evidence=IMP] [GO:0043566
"structure-specific DNA binding" evidence=IDA] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0045190 "isotype
switching" evidence=IMP] [GO:0045950 "negative regulation of
mitotic recombination" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 MGI:MGI:101938 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0005654 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0016887 GO:GO:0006298 Reactome:REACT_120463 GO:GO:0001673
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0045190
GO:GO:0071407 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Reactome:REACT_27235
GO:GO:0006303 GO:GO:0032407 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 OrthoDB:EOG43N7C7
ChiTaRS:Mlh1 GO:GO:0032137 GO:GO:0007060 GO:GO:0043060
GO:GO:0051257 EMBL:AF250844 EMBL:AK168849 EMBL:U60872 EMBL:U59881
EMBL:U59882 EMBL:U59883 EMBL:U59884 IPI:IPI00122425
RefSeq:NP_081086.2 UniGene:Mm.486383 ProteinModelPortal:Q9JK91
SMR:Q9JK91 STRING:Q9JK91 PhosphoSite:Q9JK91 PaxDb:Q9JK91
PRIDE:Q9JK91 Ensembl:ENSMUST00000035079 GeneID:17350 KEGG:mmu:17350
GeneTree:ENSGT00550000074923 InParanoid:Q3TG77 NextBio:291948
Bgee:Q9JK91 CleanEx:MM_MLH1 Genevestigator:Q9JK91
GermOnline:ENSMUSG00000032498 Uniprot:Q9JK91
Length = 760
Score = 248 (92.4 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 84/285 (29%), Positives = 132/285 (46%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDG 60
G I RL E V N + +G V+ ++E++ N +DA +T + V V +++ D+G
Sbjct: 6 GVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNG 65
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
+GI ++ L ++ ER TSKL +D I T+GFRGEALASIS V+ + I TK
Sbjct: 66 TGIRKEDLDIVCERFT-TSKL---QTFEDLASISTYGFRGEALASISHVAHVTITTKTAD 121
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
YR K L + GT + DLFYN RRK +++ P + + +
Sbjct: 122 GKCAYRASYSDGK-LQAPPKPCAGNQGTLITVEDLFYNIITRRKALKN-PSEEYGKILEV 179
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGAL- 239
V R ++ + +SF + T FG L EV D L
Sbjct: 180 VGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLA 239
Query: 240 -EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
+++GYIS+ S+ K ++IN R V + K + + A++
Sbjct: 240 FKMNGYISNANYSVK-KCIFLLFINHRLVESAALRKAIETVYAAY 283
Score = 46 (21.3 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 464 ESSWFQDHQPSRHLFSPPLENLKKEGDHL 492
ES W +D P L +E LKK+ + L
Sbjct: 598 ESGWTEDDGPKEGLAEYIVEFLKKKAEML 626
Score = 38 (18.4 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
P L+L D+ P K V F E +L +++ I S
Sbjct: 290 PFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILQRVQQHIES 332
>RGD|620937 [details] [associations]
symbol:Mlh1 "mutL homolog 1, colon cancer, nonpolyposis type 2
(E. coli)" species:10116 "Rattus norvegicus" [GO:0000239
"pachytene" evidence=IEA;ISO] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA;ISO] [GO:0000712 "resolution
of meiotic recombination intermediates" evidence=IEA;ISO]
[GO:0000793 "condensed chromosome" evidence=ISO] [GO:0000794
"condensed nuclear chromosome" evidence=ISO] [GO:0000795
"synaptonemal complex" evidence=IEA;ISO;IDA] [GO:0001666 "response
to hypoxia" evidence=IEP] [GO:0001673 "male germ cell nucleus"
evidence=IEA;ISO] [GO:0002204 "somatic recombination of
immunoglobulin genes involved in immune response" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003697
"single-stranded DNA binding" evidence=IEA;ISO;IBA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0005712 "chiasma"
evidence=IEA;ISO;IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006298
"mismatch repair" evidence=IEA;ISO;IBA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA;ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA;ISO]
[GO:0007126 "meiosis" evidence=ISO] [GO:0007131 "reciprocal meiotic
recombination" evidence=ISO;IBA] [GO:0007140 "male meiosis"
evidence=ISO] [GO:0007283 "spermatogenesis" evidence=IEA;IEP;ISO]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA;ISO] [GO:0009636 "response to toxic
substance" evidence=IEP] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA;ISO;IBA] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032137 "guanine/thymine mispair
binding" evidence=IEA;ISO] [GO:0032300 "mismatch repair complex"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IEA;ISO;IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA;ISO;IBA] [GO:0042493 "response to
drug" evidence=IEP] [GO:0043060 "meiotic metaphase I plate
congression" evidence=IEA;ISO] [GO:0043566 "structure-specific DNA
binding" evidence=ISO] [GO:0045132 "meiotic chromosome segregation"
evidence=ISO] [GO:0045190 "isotype switching" evidence=IEA;ISO]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA;ISO] [GO:0048477 "oogenesis" evidence=IEA;ISO]
[GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 EMBL:U80054 Prosite:PS00058 RGD:620937
GO:GO:0005524 GO:GO:0042493 GO:GO:0009636 GO:GO:0001666
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0071407 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
GO:GO:0016446 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 IPI:IPI00947906
RefSeq:NP_112315.1 UniGene:Rn.20391 ProteinModelPortal:P97679
STRING:P97679 PRIDE:P97679 GeneID:81685 KEGG:rno:81685
UCSC:RGD:620937 InParanoid:P97679 NextBio:615316
ArrayExpress:P97679 Genevestigator:P97679
GermOnline:ENSRNOG00000033809 Uniprot:P97679
Length = 757
Score = 238 (88.8 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 83/285 (29%), Positives = 131/285 (45%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDG 60
G I RL E V N + +G V+ ++E+ N +DA +T + V V +++ D+G
Sbjct: 6 GVIRRLDETVVNRIAAGEVIQRPANAIKEMTENCLDAKSTNIQVIVREGGLKLIQIQDNG 65
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
+GI ++ L ++ ER TSKL +D I T+GFRGEALASIS V+ + I TK
Sbjct: 66 TGIRKEDLDIVCERFT-TSKL---QTFEDLAMISTYGFRGEALASISHVAHVTITTKTAD 121
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
YR K L + GT + DLFYN R+K +++ P + + +
Sbjct: 122 GKCAYRASYSDGK-LQAPPKPCAGNQGTLITVEDLFYNIITRKKALKN-PSEEYGKILEV 179
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGAL- 239
V R ++ + +SF + T FG L EV D L
Sbjct: 180 VGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLA 239
Query: 240 -EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
+++GYIS+ S+ K ++IN R V + K + + A++
Sbjct: 240 FKMNGYISNANYSVK-KCIFLLFINHRLVESAALKKAIEAVYAAY 283
Score = 55 (24.4 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 38/153 (24%), Positives = 58/153 (37%)
Query: 353 KKIAHDSFDVDMLE-DAELPLESSRFXXXXXXXXXXXXPLKNLAKQRDHMFHKECERI-T 410
K+ DS DV+M+E D+ + ++ + L+ R H +E R T
Sbjct: 473 KRHPEDS-DVEMMENDSRKEMTAACYPRRRIINLTSVLSLQEEINDRGHETLREMLRNHT 531
Query: 411 FQEFQKDPVELAEENTEMEFFSQPKHSSSL----LDGSFAEC----LPIVPPKIDHRVWT 462
F LA+ T++ + K S L L FA LP P D +
Sbjct: 532 FVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRLPEPAPLFDFAMLA 591
Query: 463 I---ESSWFQDHQPSRHLFSPPLENLKKEGDHL 492
+ ES W ++ P L +E LKK+ L
Sbjct: 592 LDSPESGWTEEDGPKEGLAEYIVEFLKKKAKML 624
Score = 37 (18.1 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 309 YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
YL+ P ++ D+ P K V F E +L +++ I S
Sbjct: 293 YLILEISPQNV-DVNVHPTKHEVHFLHEESILERVQQHIES 332
>UNIPROTKB|P97679 [details] [associations]
symbol:Mlh1 "DNA mismatch repair protein Mlh1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 EMBL:U80054 Prosite:PS00058 RGD:620937
GO:GO:0005524 GO:GO:0042493 GO:GO:0009636 GO:GO:0001666
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0071407 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
GO:GO:0016446 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 IPI:IPI00947906
RefSeq:NP_112315.1 UniGene:Rn.20391 ProteinModelPortal:P97679
STRING:P97679 PRIDE:P97679 GeneID:81685 KEGG:rno:81685
UCSC:RGD:620937 InParanoid:P97679 NextBio:615316
ArrayExpress:P97679 Genevestigator:P97679
GermOnline:ENSRNOG00000033809 Uniprot:P97679
Length = 757
Score = 238 (88.8 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 83/285 (29%), Positives = 131/285 (45%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDG 60
G I RL E V N + +G V+ ++E+ N +DA +T + V V +++ D+G
Sbjct: 6 GVIRRLDETVVNRIAAGEVIQRPANAIKEMTENCLDAKSTNIQVIVREGGLKLIQIQDNG 65
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
+GI ++ L ++ ER TSKL +D I T+GFRGEALASIS V+ + I TK
Sbjct: 66 TGIRKEDLDIVCERFT-TSKL---QTFEDLAMISTYGFRGEALASISHVAHVTITTKTAD 121
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
YR K L + GT + DLFYN R+K +++ P + + +
Sbjct: 122 GKCAYRASYSDGK-LQAPPKPCAGNQGTLITVEDLFYNIITRKKALKN-PSEEYGKILEV 179
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGAL- 239
V R ++ + +SF + T FG L EV D L
Sbjct: 180 VGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIRSIFGNAVSRELIEVGCEDKTLA 239
Query: 240 -EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
+++GYIS+ S+ K ++IN R V + K + + A++
Sbjct: 240 FKMNGYISNANYSVK-KCIFLLFINHRLVESAALKKAIEAVYAAY 283
Score = 55 (24.4 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 38/153 (24%), Positives = 58/153 (37%)
Query: 353 KKIAHDSFDVDMLE-DAELPLESSRFXXXXXXXXXXXXPLKNLAKQRDHMFHKECERI-T 410
K+ DS DV+M+E D+ + ++ + L+ R H +E R T
Sbjct: 473 KRHPEDS-DVEMMENDSRKEMTAACYPRRRIINLTSVLSLQEEINDRGHETLREMLRNHT 531
Query: 411 FQEFQKDPVELAEENTEMEFFSQPKHSSSL----LDGSFAEC----LPIVPPKIDHRVWT 462
F LA+ T++ + K S L L FA LP P D +
Sbjct: 532 FVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRLPEPAPLFDFAMLA 591
Query: 463 I---ESSWFQDHQPSRHLFSPPLENLKKEGDHL 492
+ ES W ++ P L +E LKK+ L
Sbjct: 592 LDSPESGWTEEDGPKEGLAEYIVEFLKKKAKML 624
Score = 37 (18.1 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 309 YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
YL+ P ++ D+ P K V F E +L +++ I S
Sbjct: 293 YLILEISPQNV-DVNVHPTKHEVHFLHEESILERVQQHIES 332
>FB|FBgn0011659 [details] [associations]
symbol:Mlh1 "Mlh1" species:7227 "Drosophila melanogaster"
[GO:0006298 "mismatch repair" evidence=ISS;IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0032407 "MutSalpha
complex binding" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 EMBL:AE013599
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
CTD:4292 GeneTree:ENSGT00550000074923 RefSeq:NP_477022.1
UniGene:Dm.26257 ProteinModelPortal:A1Z7C1 SMR:A1Z7C1 STRING:A1Z7C1
PRIDE:A1Z7C1 EnsemblMetazoa:FBtr0088790 GeneID:35796
KEGG:dme:Dmel_CG11482 UCSC:CG11482-RA FlyBase:FBgn0011659
InParanoid:A1Z7C1 OrthoDB:EOG470RZ8 PhylomeDB:A1Z7C1
GenomeRNAi:35796 NextBio:795251 Bgee:A1Z7C1 Uniprot:A1Z7C1
Length = 664
Score = 252 (93.8 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 83/284 (29%), Positives = 129/284 (45%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDG 60
G I +L E V N + +G ++ ++EL+ NS+DA +T + V V +++ D+G
Sbjct: 8 GVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQDNG 67
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
+GI R+ L ++ ER TSKL D+ I TFGFRGEALASIS V+ L I TK
Sbjct: 68 TGIRREDLAIVCERFT-TSKLTRFEDLSQ---IATFGFRGEALASISHVAHLSIQTKTAK 123
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
GY+ K L + GT + DLFYN P RR+ ++S P + + +
Sbjct: 124 EKCGYKATYADGK-LQGQPKPCAGNQGTIICIEDLFYNMPQRRQALRS-PAEEFQRLSEV 181
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALE 240
+ R A+ +P+V F L T +G L E + D +
Sbjct: 182 LARYAVHNPRVGFTLRKQGDAQPALRTPVASSRSENIRIIYGAAISKELLEFSHRDEVYK 241
Query: 241 ISGYISSPYDSISVKAFQYV-YINSRYVCKGPIHKLLNHLAASF 283
+ S K Q + +IN R V + ++ + A++
Sbjct: 242 FEAECLITQVNYSAKKCQMLLFINQRLVESTALRTSVDSIYATY 285
Score = 37 (18.1 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 688 EPGVSNGASGTASPLDKDEF-------SNEFEVSK--DIKKPLRLSC 725
+ GVS+ +S AS L ++ F S E +S D++K + C
Sbjct: 395 DSGVSSSSSQEASRLPEESFRVTAAKKSREVRLSSVLDMRKRVERQC 441
Score = 37 (18.1 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 12/54 (22%), Positives = 23/54 (42%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 360
P ++L P D+ P K V F E ++ I++ + + + A +F
Sbjct: 292 PFVYMSLTLPPQNLDVNVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTF 345
>UNIPROTKB|P54277 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006200 "ATP catabolic
process" evidence=IBA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 Pfam:PF02518 SMART:SM00387 Prosite:PS00058
Pfam:PF00505 GO:GO:0005524 GO:GO:0016887 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006298
EMBL:CH471058 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC013468 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
Orphanet:144 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 EMBL:U13695 EMBL:AB102870
EMBL:AB102875 EMBL:AY267352 EMBL:AC008122 EMBL:BC096330
EMBL:BC096332 IPI:IPI00005541 IPI:IPI00654710 IPI:IPI00896518
PIR:S47597 RefSeq:NP_000525.1 RefSeq:NP_001121615.1
RefSeq:NP_001121616.1 UniGene:Hs.111749 PDB:2CS1 PDBsum:2CS1
ProteinModelPortal:P54277 SMR:P54277 IntAct:P54277 STRING:P54277
PhosphoSite:P54277 DMDM:1709683 PaxDb:P54277 PRIDE:P54277
DNASU:5378 Ensembl:ENST00000409823 Ensembl:ENST00000441310
Ensembl:ENST00000447232 GeneID:5378 KEGG:hsa:5378 UCSC:uc002urh.4
CTD:5378 GeneCards:GC02P190648 H-InvDB:HIX0029784 HGNC:HGNC:9121
HPA:CAB010233 MIM:600258 neXtProt:NX_P54277 PharmGKB:PA33447
HOGENOM:HOG000039972 HOVERGEN:HBG031886 InParanoid:P54277 KO:K10864
OMA:PFFHHLT OrthoDB:EOG41C6VK PhylomeDB:P54277 ChiTaRS:PMS1
EvolutionaryTrace:P54277 GenomeRNAi:5378 NextBio:20866
ArrayExpress:P54277 Bgee:P54277 CleanEx:HS_PMS1
Genevestigator:P54277 GermOnline:ENSG00000064933 Uniprot:P54277
Length = 932
Score = 227 (85.0 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 88/359 (24%), Positives = 165/359 (45%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
+ +LP A + S ++ + VV+EL+ NS+DAGAT V V + ++V D+G G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ ++ TSK+ D+++ T T+GFRGEAL SI ++ + I T+
Sbjct: 61 IKAVDAPVMAMKYY-TSKINSHEDLENLT---TYGFRGEALGSICCIAEVLITTRTAADN 116
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC-- 180
+ V+ GS + L GTTV + LF N PVR+++ S+ KK +KK
Sbjct: 117 FSTQYVLDGSGHI-LSQKPSHLGQGTTVTALRLFKNLPVRKQFY-STAKKCKDEIKKIQD 174
Query: 181 -VLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLD--EVNANDG 237
++ ++ P + F+ ++ + G + ++ + ++ +
Sbjct: 175 LLMSFGILKPDLRIVFV--HNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEES 232
Query: 238 ALEISGYISS-----PYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 292
+ +SG++ + S+S +++INSR V + I KL+ H N
Sbjct: 233 QIYLSGFLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRH-----------HYN 281
Query: 293 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
LK + ++ P + L + P + D+ P K+ V+ ++ E VL +E + + +
Sbjct: 282 ---LKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCY 337
Score = 65 (27.9 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 21/85 (24%), Positives = 38/85 (44%)
Query: 469 QDHQPSRHLFSPP--LENLKKEGDHLFRKECERITFGDAEKDPAELQEENTEMEYVPQPK 526
QDH+P + +P LE+ + + L++ E EK +L+ N++M+ + +
Sbjct: 583 QDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQE 642
Query: 527 YSFGLSDGSFAKCLPIVPWKI-DRH 550
L DG K P W + +H
Sbjct: 643 SQMSLKDGR-KKIKPTSAWNLAQKH 666
Score = 41 (19.5 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 17/72 (23%), Positives = 28/72 (38%)
Query: 1289 DLLEFLQQLADTDGSST---TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT- 1344
DL E L + + + P V+ L +A R + L + I+ +K
Sbjct: 849 DLKEILNAILNRNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQF 908
Query: 1345 -SLCFQCAHGRP 1355
+ +C HGRP
Sbjct: 909 GNEIKECVHGRP 920
Score = 39 (18.8 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 554 IESSRFQYHQSSPHLYSSPLENLSKEGDHLFREECERITFGEFEKHTPELKEENS--KRE 611
++ R Q+ +P + LE+ + + + L++ E EK T +L+ NS KR
Sbjct: 582 VQDHRPQFLIENP---KTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRA 638
Query: 612 LVSQPKYSSK 621
+ + + S K
Sbjct: 639 IEQESQMSLK 648
>UNIPROTKB|P40692 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0001673
"male germ cell nucleus" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0032407 "MutSalpha complex
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
EMBL:CH471055 GO:GO:0009636 GO:GO:0001666 GO:GO:0048477
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 Reactome:REACT_111183
GO:GO:0001673 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0045190
GO:GO:0071407 MIM:276300 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0006303
GO:GO:0045950 Orphanet:144 MIM:608089 GO:GO:0000289 GO:GO:0000239
GO:GO:0000712 GO:GO:0000795 GO:GO:0016446 eggNOG:COG0323
EMBL:AC006583 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 EMBL:U07343 EMBL:U07418
EMBL:U40978 EMBL:U40960 EMBL:U40961 EMBL:U40962 EMBL:U40963
EMBL:U40964 EMBL:U40965 EMBL:U40966 EMBL:U40967 EMBL:U40968
EMBL:U40969 EMBL:U40970 EMBL:U40971 EMBL:U40972 EMBL:U40973
EMBL:U40974 EMBL:U40975 EMBL:U40976 EMBL:U40977 EMBL:U17857
EMBL:U17839 EMBL:U17840 EMBL:U17841 EMBL:U17842 EMBL:U17843
EMBL:U17844 EMBL:U17845 EMBL:U17846 EMBL:U17847 EMBL:U17848
EMBL:U17849 EMBL:U17851 EMBL:U17852 EMBL:U17853 EMBL:U17854
EMBL:U17855 EMBL:U17856 EMBL:AY217549 EMBL:AK295359 EMBL:AK298324
EMBL:AK316074 EMBL:AK316264 EMBL:AC011816 EMBL:BC006850
IPI:IPI00029754 IPI:IPI00742734 PIR:S43085 RefSeq:NP_000240.1
RefSeq:NP_001161089.1 RefSeq:NP_001161090.1 RefSeq:NP_001161091.1
RefSeq:NP_001245200.1 RefSeq:NP_001245202.1 RefSeq:NP_001245203.1
UniGene:Hs.195364 PDB:3NA3 PDB:3RBN PDBsum:3NA3 PDBsum:3RBN
ProteinModelPortal:P40692 SMR:P40692 DIP:DIP-27601N IntAct:P40692
MINT:MINT-257265 STRING:P40692 PhosphoSite:P40692 DMDM:730028
PaxDb:P40692 PRIDE:P40692 DNASU:4292 Ensembl:ENST00000231790
Ensembl:ENST00000455445 Ensembl:ENST00000458205
Ensembl:ENST00000539477 GeneID:4292 KEGG:hsa:4292 UCSC:uc003cgl.3
CTD:4292 GeneCards:GC03P037034 HGNC:HGNC:7127 HPA:CAB013294
MIM:120436 MIM:158320 MIM:609310 neXtProt:NX_P40692 Orphanet:587
PharmGKB:PA240 HOGENOM:HOG000176000 HOVERGEN:HBG006374
InParanoid:P40692 OrthoDB:EOG43N7C7 PhylomeDB:P40692 ChiTaRS:Mlh1
EvolutionaryTrace:P40692 GenomeRNAi:4292 NextBio:16893
PMAP-CutDB:P40692 ArrayExpress:P40692 Bgee:P40692 CleanEx:HS_MLH1
Genevestigator:P40692 GermOnline:ENSG00000076242 GO:GO:0032137
GO:GO:0007060 GO:GO:0043060 GO:GO:0051257 Uniprot:P40692
Length = 756
Score = 247 (92.0 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 84/286 (29%), Positives = 135/286 (47%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDG 60
G I RL E V N + +G V+ ++E++ N +DA +T + V V +++ D+G
Sbjct: 6 GVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNG 65
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
+GI ++ L ++ ER TSKL +D I T+GFRGEALASIS V+ + I TK
Sbjct: 66 TGIRKEDLDIVCERFT-TSKL---QSFEDLASISTYGFRGEALASISHVAHVTITTKTAD 121
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
YR K L + GT + DLFYN RRK +++ P + + +
Sbjct: 122 GKCAYRASYSDGK-LKAPPKPCAGNQGTQITVEDLFYNIATRRKALKN-PSEEYGKILEV 179
Query: 181 VLRIALVHPKVSFKFIDMESEDEL-LCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGAL 239
V R ++ + +SF + + E + T FG L E+ D L
Sbjct: 180 VGRYSVHNAGISFS-VKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTL 238
Query: 240 --EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
+++GYIS+ S+ K ++IN R V + K + + A++
Sbjct: 239 AFKMNGYISNANYSVK-KCIFLLFINHRLVESTSLRKAIETVYAAY 283
Score = 42 (19.8 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 464 ESSWFQDHQPSRHLFSPPLENLKKEGDHL 492
ES W ++ P L +E LKK+ + L
Sbjct: 594 ESGWTEEDGPKEGLAEYIVEFLKKKAEML 622
Score = 38 (18.4 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
P L+L D+ P K V F E +L +++ I S
Sbjct: 290 PFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIES 332
>UNIPROTKB|Q9Y6S7 [details] [associations]
symbol:unknown "Putative uncharacterized protein unknown"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR014790
Pfam:PF08676 SMART:SM00853 GO:GO:0005524 GO:GO:0006298
EMBL:AL049780 GO:GO:0030983 EMBL:AC006530 PANTHER:PTHR10073
UniGene:Hs.436650 HGNC:HGNC:7128 IPI:IPI00747818 SMR:Q9Y6S7
STRING:Q9Y6S7 Ensembl:ENST00000380968 HOGENOM:HOG000153890
HOVERGEN:HBG079075 Uniprot:Q9Y6S7
Length = 391
Score = 221 (82.9 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 82/264 (31%), Positives = 123/264 (46%)
Query: 1156 PDSINKSCLEDAKVLQQVDKKFIPVV----------AGGTLAV-IDQHAADERIRLEEL- 1203
P K + +VLQQVD KFI + AGG L V +DQHAA ERIRLE+L
Sbjct: 124 PYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGNLLVLVDQHAAHERIRLEQLI 183
Query: 1204 ----RHKVLSGEGKSV---AYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSR 1256
+ G G+ + L E+ + E +LL + + ++D G + + S
Sbjct: 184 IDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCYHKNLEDLG-LEFVFPDTSD 242
Query: 1257 SFNKNLNLLQR-QITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLN 1315
S L L+ + + + A G + ++E LQ G T P +V +VL
Sbjct: 243 S----LVLVGKVPLCFVEREANELRRGRSTVTKSIVELLQTTGGIQG--TLPLTVQKVLA 296
Query: 1316 SKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALH--KQI--- 1370
S+AC GAI F D L E ++E L L FQCAHGRP+ +PL +++ L KQI
Sbjct: 297 SQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADIDHLEQEKQIKPN 356
Query: 1371 -AQLNNSSELWHGLHRGEISLKRA 1393
+L ++ W + E +++
Sbjct: 357 LTKLRKMAQAWRLFGKAECDTRQS 380
>UNIPROTKB|Q3BDU3 [details] [associations]
symbol:PMS1 "Rhabdomyosarcoma antigen MU-RMS-40.10E"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 Pfam:PF00505 GO:GO:0005524 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122
UniGene:Hs.111749 HGNC:HGNC:9121 HOGENOM:HOG000039972
HOVERGEN:HBG031886 ChiTaRS:PMS1 EMBL:AY540751 IPI:IPI00916989
SMR:Q3BDU3 STRING:Q3BDU3 Ensembl:ENST00000450931 Uniprot:Q3BDU3
Length = 659
Score = 192 (72.6 bits), Expect = 9.4e-15, Sum P(3) = 9.4e-15
Identities = 60/197 (30%), Positives = 101/197 (51%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
+ +LP A + S ++ + VV+EL+ NS+DAGAT V V + ++V D+G G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ ++ TSK+ D+++ T T+GFRGEAL SI ++ + I T+
Sbjct: 61 IKAVDAPVMAMKYY-TSKINSHEDLENLT---TYGFRGEALGSICCIAEVLITTRTAADN 116
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC-- 180
+ V+ GS + L GTTV + LF N PVR+++ S+ KK +KK
Sbjct: 117 FSTQYVLDGSGHI-LSQKPSHLGQGTTVTALRLFKNLPVRKQFY-STAKKCKDEIKKIQD 174
Query: 181 -VLRIALVHPKVSFKFI 196
++ ++ P + F+
Sbjct: 175 LLMSFGILKPDLRIVFV 191
Score = 68 (29.0 bits), Expect = 9.4e-15, Sum P(3) = 9.4e-15
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 249 YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPA 308
+ S+S +++INSR V + I KL+ H N LK + ++ P
Sbjct: 210 FTSLSTPERSFIFINSRPVHQKDILKLIRH-----------HYN---LKCLKESTRLYPV 255
Query: 309 YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+ L + P + D+ P K+ V+ ++ E VL +E + + +
Sbjct: 256 FFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCY 298
Score = 65 (27.9 bits), Expect = 9.4e-15, Sum P(3) = 9.4e-15
Identities = 21/85 (24%), Positives = 38/85 (44%)
Query: 469 QDHQPSRHLFSPP--LENLKKEGDHLFRKECERITFGDAEKDPAELQEENTEMEYVPQPK 526
QDH+P + +P LE+ + + L++ E EK +L+ N++M+ + +
Sbjct: 544 QDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQE 603
Query: 527 YSFGLSDGSFAKCLPIVPWKI-DRH 550
L DG K P W + +H
Sbjct: 604 SQMSLKDGR-KKIKPTSAWNLAQKH 627
Score = 39 (18.8 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 554 IESSRFQYHQSSPHLYSSPLENLSKEGDHLFREECERITFGEFEKHTPELKEENS--KRE 611
++ R Q+ +P + LE+ + + + L++ E EK T +L+ NS KR
Sbjct: 543 VQDHRPQFLIENP---KTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRA 599
Query: 612 LVSQPKYSSK 621
+ + + S K
Sbjct: 600 IEQESQMSLK 609
>UNIPROTKB|H0Y818 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0005634 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC006583
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
Ensembl:ENST00000456676 Uniprot:H0Y818
Length = 679
Score = 237 (88.5 bits), Expect = 3.8e-14, Sum P(3) = 3.8e-14
Identities = 82/282 (29%), Positives = 133/282 (47%)
Query: 6 RLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGIS 64
RL E V N + +G V+ ++E++ N +DA +T + V V +++ D+G+GI
Sbjct: 2 RLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTGIR 61
Query: 65 RDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNG 124
++ L ++ ER TSKL +D I T+GFRGEALASIS V+ + I TK
Sbjct: 62 KEDLDIVCERFT-TSKL---QSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCA 117
Query: 125 YRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRI 184
YR K L + GT + DLFYN RRK +++ P + + + V R
Sbjct: 118 YRASYSDGK-LKAPPKPCAGNQGTQITVEDLFYNIATRRKALKN-PSEEYGKILEVVGRY 175
Query: 185 ALVHPKVSFKFIDMESEDEL-LCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGAL--EI 241
++ + +SF + + E + T FG L E+ D L ++
Sbjct: 176 SVHNAGISFS-VKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKM 234
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
+GYIS+ S+ K ++IN R V + K + + A++
Sbjct: 235 NGYISNANYSVK-KCIFLLFINHRLVESTSLRKAIETVYAAY 275
Score = 42 (19.8 bits), Expect = 3.8e-14, Sum P(3) = 3.8e-14
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 464 ESSWFQDHQPSRHLFSPPLENLKKEGDHL 492
ES W ++ P L +E LKK+ + L
Sbjct: 586 ESGWTEEDGPKEGLAEYIVEFLKKKAEML 614
Score = 38 (18.4 bits), Expect = 3.8e-14, Sum P(3) = 3.8e-14
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
P L+L D+ P K V F E +L +++ I S
Sbjct: 282 PFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIES 324
>TAIR|locus:2122388 [details] [associations]
symbol:MLH1 "AT4G09140" species:3702 "Arabidopsis
thaliana" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=ISS;IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA;IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0030674 "protein binding, bridging" evidence=ISS]
[GO:0006312 "mitotic recombination" evidence=RCA;IMP] [GO:0009555
"pollen development" evidence=RCA;IMP] [GO:0009845 "seed
germination" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=RCA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007129 "synapsis" evidence=RCA] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010564
"regulation of cell cycle process" evidence=RCA] [GO:0016444
"somatic cell DNA recombination" evidence=RCA] [GO:0016568
"chromatin modification" evidence=RCA] [GO:0031047 "gene silencing
by RNA" evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 Pfam:PF02518
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 EMBL:CP002687
GO:GO:0009555 GO:GO:0016887 GO:GO:0048316 GO:GO:0009845
GO:GO:0006298 GO:GO:0000790 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006312 EMBL:AL161514
GO:GO:0007131 GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712
GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
HSSP:P54278 ProtClustDB:CLSN2690816 EMBL:AJ012747 IPI:IPI00541714
PIR:F85092 PIR:T51620 RefSeq:NP_567345.2 UniGene:At.671
ProteinModelPortal:Q9ZRV4 SMR:Q9ZRV4 IntAct:Q9ZRV4 STRING:Q9ZRV4
PRIDE:Q9ZRV4 EnsemblPlants:AT4G09140.1 GeneID:826493
KEGG:ath:AT4G09140 TAIR:At4g09140 InParanoid:Q9ZRV4
PhylomeDB:Q9ZRV4 Genevestigator:Q9ZRV4 Uniprot:Q9ZRV4
Length = 737
Score = 227 (85.0 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 81/274 (29%), Positives = 134/274 (48%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I RL E+V N + +G V+ V+ELV NS+DA ++ + V V ++V DDG G
Sbjct: 29 IQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADSSSISVVVKDGGLKLIQVSDDGHG 88
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I R+ L +L ERH TSKL +D + + GFRGEALAS++ V+ + + T G+
Sbjct: 89 IRREDLPILCERHT-TSKL---TKFEDLFSLSSMGFRGEALASMTYVAHVTVTTITKGQI 144
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
+GYR + ++ E K GT ++ +LFYN RRK +Q+S +
Sbjct: 145 HGYRVSYRDGV-----MEHEPKACAAVKGTQIMVENLFYNMIARRKTLQNSADDY-GKIV 198
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLD--EVNAND 236
+ R+A+ + VSF + + + +G+ L EV++ D
Sbjct: 199 DLLSRMAIHYNNVSFSCRKHGAVKADVHSVVSPSRLDSIRSVYGVSVAKNLMKVEVSSCD 258
Query: 237 GA---LEISGYISSPYDSISVKAFQYVYINSRYV 267
+ ++ G+IS+ + ++ K ++IN R V
Sbjct: 259 SSGCTFDMEGFISNS-NYVAKKTILVLFINDRLV 291
Score = 43 (20.2 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 559 FQYHQSSPHLYSSPLENLSKE 579
F Q + HLY + + NLSKE
Sbjct: 489 FALVQYNTHLYLANVVNLSKE 509
Score = 42 (19.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 962 KTDWLCSVLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHSAPPFHR 1011
K +++ S L+S + D+P +Q K + P++K + R+ S+ P R
Sbjct: 371 KVEYIQSTLTSQKSDSPVSQ--KPSGQKTQKVPVNKMV--RTDSSDPAGR 416
Score = 38 (18.4 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 358 DSFDVDMLEDAE 369
D+ D D+L DAE
Sbjct: 676 DNLDQDLLSDAE 687
>UNIPROTKB|C9JF76 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122 HGNC:HGNC:9121
ChiTaRS:PMS1 IPI:IPI01013621 ProteinModelPortal:C9JF76 SMR:C9JF76
STRING:C9JF76 Ensembl:ENST00000424766 HOGENOM:HOG000137699
ArrayExpress:C9JF76 Bgee:C9JF76 Uniprot:C9JF76
Length = 194
Score = 192 (72.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 60/197 (30%), Positives = 101/197 (51%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
+ +LP A + S ++ + VV+EL+ NS+DAGAT V V + ++V D+G G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ ++ TSK+ D+++ T T+GFRGEAL SI ++ + I T+
Sbjct: 61 IKAVDAPVMAMKYY-TSKINSHEDLENLT---TYGFRGEALGSICCIAEVLITTRTAADN 116
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC-- 180
+ V+ GS + L GTTV + LF N PVR+++ S+ KK +KK
Sbjct: 117 FSTQYVLDGSGHI-LSQKPSHLGQGTTVTALRLFKNLPVRKQFY-STAKKCKDEIKKIQD 174
Query: 181 -VLRIALVHPKVSFKFI 196
++ ++ P + F+
Sbjct: 175 LLMSFGILKPDLRIVFV 191
>UNIPROTKB|Q753U9 [details] [associations]
symbol:AFR226C "AFR226Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003697 "single-stranded DNA binding" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR015434
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
EMBL:AE016819 GenomeReviews:AE016819_GR GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 OrthoDB:EOG4B5SFH
PANTHER:PTHR10073:SF9 RefSeq:NP_985773.1 ProteinModelPortal:Q753U9
STRING:Q753U9 EnsemblFungi:AAS53597 GeneID:4622035
KEGG:ago:AGOS_AFR226C OMA:PPRIRIN PhylomeDB:Q753U9 Uniprot:Q753U9
Length = 704
Score = 225 (84.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 101/388 (26%), Positives = 161/388 (41%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV----GVCNCYVKV 56
MG I+R+ + + V S + ++ T V+EL+ N++DAGA+ V + V G C+ Y+ V
Sbjct: 1 MG-IHRIEDESKWKVVSASFIYSPTTAVKELLDNAIDAGASNVHIEVDSKTGGCD-YISV 58
Query: 57 VDDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS----LL 112
DDG+G+ ++ H TSKL +D + GT GFRGEAL ++ +S +
Sbjct: 59 RDDGNGVGVVDRHMMCLNHT-TSKL---RKYEDVSTCGTLGFRGEALFMLATLSNHCGTM 114
Query: 113 EIITKAHGRPNGYRKVMKGSKCLYLGIDDE-RKDVGTTVVSRDLFYNQPVRRKYMQSSPK 171
E+ T+ G R + GS + G VGTTV R L + R + S P+
Sbjct: 115 EVSTRCKSERMGTRWQVDGSGEVKEGSTSSVPMPVGTTVTIRKLLHGLRARHVTISSRPR 174
Query: 172 KVLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDE 231
K L + + VL+ LV ++ F F + S D C +
Sbjct: 175 KSLDDISQLVLQYTLVFRRIRFHFY-LVSLDRADFVCQRKLQLNVDPKLSLLRVLGLQAR 233
Query: 232 VNANDGALEISGYISSPYDSISVKAFQYVYINSRYVC--KGPIHKL-LNHLAASFDCSDS 288
+ G L G + D++S + V K I + LN S S
Sbjct: 234 IRKLSGNLHEFGPVPVT-DTLSARGVLPSMTRGAEVTQTKKTIKAVALNRRPMSLSLSLG 292
Query: 289 WKANNGFLKGKRSKSQACPA-YLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
N K RS S P +++ L C PH L D+ +P K ++ ++ A
Sbjct: 293 SAVNKMLNKTYRSYSLPDPTIWMVELECDPH-LVDVNIEPTKDDAAISSLATLIQCLQDA 351
Query: 347 IRSAWMK--KIAHDSFDVDMLEDAELPL 372
+ ++ +I D V +D + L
Sbjct: 352 LEPIIIRLHRIDRDGESVSRTDDPQSTL 379
Score = 43 (20.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 12/49 (24%), Positives = 21/49 (42%)
Query: 815 RASLNLFPSHAEPFTKETNFLSDSIEPVGNSVSDYKALNSVWCSKISDP 863
R +LN+F + F ++ ++I +S YK W + DP
Sbjct: 622 RRNLNMFSEYTNNFISRVHYDRNNIVLQKHSKLTYKK-ELTWIFRKGDP 669
Score = 39 (18.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 54/297 (18%), Positives = 109/297 (36%)
Query: 1013 KRRYISLNC-CSVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSSE------ 1065
+RR + +C E G H LH + G + ++ + KP E
Sbjct: 397 RRRKLPSSCFMKQEPGSDKTHELHLNITESQQGTLQASTEAELIDRNQQKPVEEWGPTDF 456
Query: 1066 EEDFRPDFKIESSTILDLEETHKAENFKLSLC-P-HAHLGAQAEGTSIISGTKWRNGHPQ 1123
E+ D + S+ I L + + S+ P + L + + SG W
Sbjct: 457 EDSLNSDIQSTSNPISVLAYRYDETSHDDSVAFPRNISLSNPFHMSKLKSG--WNTSLDS 514
Query: 1124 TTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAG 1183
+T+ +I +Q + D+ S + + D+ + +A ++ A
Sbjct: 515 STDGSILDSAASQTSRSDLHSSYGNSSTTNPTSDAQSPQITYNAGTKRKASGSESKRNAR 574
Query: 1184 GTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQL-LQNFAEQIK 1242
T +R E L+ + S G S + +++ + P + L F+E
Sbjct: 575 PTKMKTTNRRPTQREERELLKLQY-SSTGPSEENVPIQKDKIKPTKDRRRNLNMFSEYTN 633
Query: 1243 DWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLAD 1299
++ I +H +++N +LQ+ + + IF + L++F+QQ A+
Sbjct: 634 NF--ISRVH------YDRNNIVLQKHSKLTYKKELTWIFRKGDPALSLIDFVQQKAE 682
>ZFIN|ZDB-GENE-030616-528 [details] [associations]
symbol:pms1 "PMS1 postmeiotic segregation increased
1 (S. cerevisiae)" species:7955 "Danio rerio" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
ZFIN:ZDB-GENE-030616-528 GO:GO:0005524 GO:GO:0016887
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006298 GO:GO:0003697 EMBL:AL672217 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HSSP:P54278 CTD:5378 HOVERGEN:HBG031886
KO:K10864 IPI:IPI00868181 RefSeq:NP_958476.2 UniGene:Dr.85558
ProteinModelPortal:Q8JFR9 STRING:Q8JFR9 GeneID:368631
KEGG:dre:368631 InParanoid:Q8JFR9 NextBio:20813079
ArrayExpress:Q8JFR9 Uniprot:Q8JFR9
Length = 896
Score = 218 (81.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 91/354 (25%), Positives = 160/354 (45%)
Query: 8 PEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRD 66
PE VR + S V+ + VV+EL+ NS+DAG++ + V + ++V D+GSGI
Sbjct: 6 PETVR-LLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGIKAT 64
Query: 67 GLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYR 126
+ ++ +H TSK+ D++ + T+GFRGEALASI +S + I TK +
Sbjct: 65 DVSVMAVKHY-TSKISCHEDLEQ---LETYGFRGEALASICAISEVIITTKTADDDFSIQ 120
Query: 127 KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPK--KVLHSVKKCVLRI 184
+ + + + GTTV + +LF N PVRR+Y ++ K L V+ ++
Sbjct: 121 YSVDHNGQI-VSQKPSHLGQGTTVCAANLFKNLPVRRQYYSNTKKCKDELKRVQNLLMAY 179
Query: 185 ALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGALEIS-- 242
A++ P++ ++ + G + + V + EI+
Sbjct: 180 AVIKPELRVTL--SHNKAVVWQKSRVSDHRTALMAVLGAASVANMLPVQHHQEQPEITID 237
Query: 243 GYISSPYDSI-----SVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
G+ P + S ++++NSR V I KL+ S S+S
Sbjct: 238 GFFPKPGSDLNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQ-SNS--------- 287
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
S S+ P +++N+ P S D+ P KT V+ ++ + VL +E + S +
Sbjct: 288 --ESVSRRYPTFMMNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLY 339
>UNIPROTKB|F1SN54 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:CU467085 EMBL:CU582834
Ensembl:ENSSSCT00000017470 Uniprot:F1SN54
Length = 922
Score = 227 (85.0 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 94/373 (25%), Positives = 170/373 (45%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
+ +LP A + S ++ + VV+EL+ NS+DAGAT + V + ++V D+G G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEG 60
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ ++ TSK+ D+++ T T+GFRGEAL SI V+ + I T+
Sbjct: 61 IKAVDAPVMAVKYY-TSKINSHEDLENLT---TYGFRGEALGSICCVAEVLITTRTASDN 116
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC-- 180
+ V+ GS + + GTTV + LF N PVR+++ S+ KK +KK
Sbjct: 117 FSTQYVLDGSGHI-ISQKPSHLGQGTTVTALKLFKNLPVRKQFY-STAKKCKDEIKKVQD 174
Query: 181 -VLRIALVHPKVSFKFIDMES---EDELLCTCXXXXXXXXXXXXFG-IEDFSFLDEVNAN 235
++ ++ P+V FI ++ + + G +E F + E
Sbjct: 175 LLISYGVLKPEVRLVFIHNKAIIWQKTRVSDHKMALMSVLGTAVMGNMEAFQYHSE---- 230
Query: 236 DGALEISGYISS-----PYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWK 290
+ + +SG++ S+S +++INSR V + I KL+ H
Sbjct: 231 ESQIYLSGFLPKHNADHSVTSLSTPERSFIFINSRPVHQKDILKLIRHYY---------- 280
Query: 291 ANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
N LK + ++ P + L + P D+ P K+ V+ ++ E VL +E + +
Sbjct: 281 --N--LKCLKETTRLYPIFFLKIDVPTVDVDVNLTPDKSQVLLQNKESVLIALENLMTTC 336
Query: 351 WMKKIAHDSFDVD 363
+ + +S++ D
Sbjct: 337 YGSLPSTNSYESD 349
Score = 54 (24.1 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 26/135 (19%), Positives = 56/135 (41%)
Query: 423 EENTEMEFFSQPKHSSSLLDGSFAE--CLPIVPPKIDHRVWTIESSWFQDHQPS--RHLF 478
E+ E F K S+++D + ++ ++ + + + + QDH+
Sbjct: 528 EQKNLSESFCDKK--SNVIDNKSGQLTAYDLISNRVIKKPMSARALFVQDHRAQFLTENS 585
Query: 479 SPPLENLKKEGDHLFR--KECERITFGDAEKDPAELQEENTEMEYVPQPKYSFGLSDGSF 536
LE+ + + L++ E E++ + EK +L+ N +++ + + L DG
Sbjct: 586 KTSLEDATAQIEELWKTLSEEEKVKY--EEKATKDLERYNRQIKKAIEQESQISLKDGK- 642
Query: 537 AKCLPIVPWKI-DRH 550
K P W + RH
Sbjct: 643 KKIKPTSAWNLAQRH 657
Score = 52 (23.4 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 25/91 (27%), Positives = 37/91 (40%)
Query: 985 FRNH-NCEPNPIHKELSRR-SHSAPPFHRHKRRYISLNCC-SVEAGKSNAHTLHCAKNSP 1041
F +H N E + I K S+ + P ++ Y SVE NA+ H +N
Sbjct: 415 FGDHFNSENSSIDKNTSQGIPMNNLPLKNTQKEYSETRLVDSVEHPNKNANKDHIEENEE 474
Query: 1042 EAGAFKHLQQ-SSGVCNANVKPSSEEEDFRP 1071
EA K L+ + NV +S E+ P
Sbjct: 475 EAVLEKSLEICADDWSKGNVLKNSRGENIEP 505
Score = 38 (18.4 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 17/73 (23%), Positives = 28/73 (38%)
Query: 1288 VDLLEFLQQLADTDGSST---TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1344
+DL E L + + + P V+ L +A R + L + I+ +K
Sbjct: 838 MDLKEILNAILNKNAKEVYECRPRKVMSYLEGEAVRLSRQLPMYLSKEDIQDIIYRMKNQ 897
Query: 1345 --SLCFQCAHGRP 1355
+ C HGRP
Sbjct: 898 FGNEIKGCVHGRP 910
Score = 37 (18.1 bits), Expect = 6.3e-12, Sum P(3) = 6.3e-12
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 481 PLENLKKEGDHLFRKECERITFGDAEKDPAELQEENTEME 520
PL+N +KE + +A KD E EE +E
Sbjct: 440 PLKNTQKEYSETRLVDSVEHPNKNANKDHIEENEEEAVLE 479
>UNIPROTKB|I3L0B5 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC005995 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 HGNC:HGNC:9122
ProteinModelPortal:I3L0B5 SMR:I3L0B5 Ensembl:ENST00000382322
Bgee:I3L0B5 Uniprot:I3L0B5
Length = 815
Score = 150 (57.9 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 54/205 (26%), Positives = 94/205 (45%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I+K+ + +++ Q + FI + ++DQHA DE+ E L+ + +G+ L
Sbjct: 621 ISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVL-QGQR---L 676
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
A Q L L + +L E + G+ I ++N + +R + +
Sbjct: 677 IAPQTLNLTAVNEAVLIENLEIFRKNGFDFVI--------DENAPVTERAKLISLPTSKN 728
Query: 1279 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1338
FG DVD L F+ L+D+ G P V ++ S+ACR ++M G +L SE ++
Sbjct: 729 WTFGPQ--DVDELIFM--LSDSPGVMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLI 784
Query: 1339 EELKQTSLCFQCAHGRPTTVPLVNL 1363
+ + + C HGRPT + NL
Sbjct: 785 THMGEMDHPWNCPHGRPTMRHIANL 809
Score = 127 (49.8 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 40/119 (33%), Positives = 59/119 (49%)
Query: 54 VKVVDDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLE 113
++V D+G G+ + L +H TSK+ AD+ T + TFGFRGEAL+S+ +S +
Sbjct: 19 IEVSDNGCGVEEENFEGLTLKHH-TSKIQEFADL---TQVETFGFRGEALSSLCALSDVT 74
Query: 114 IITKAHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK 172
I T H ++M + + GTTV + LF PVR K Q + KK
Sbjct: 75 IST-CHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKK 132
Score = 41 (19.5 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 15/66 (22%), Positives = 32/66 (48%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVDMLE 366
P +LN+ D+ P K ++ ++ + +LA ++ ++ + DS DV+ L
Sbjct: 272 PFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF------DS-DVNKLN 324
Query: 367 DAELPL 372
++ PL
Sbjct: 325 VSQQPL 330
>UNIPROTKB|Q7SCN8 [details] [associations]
symbol:NCU09373 "Predicted protein" species:367110
"Neurospora crassa OR74A" [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR015434
Pfam:PF01119 SMART:SM00387 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 PANTHER:PTHR10073 OrthoDB:EOG4B5SFH
PANTHER:PTHR10073:SF9 HSSP:P54278 EMBL:AABX02000082
RefSeq:XP_963744.1 UniGene:Ncr.24641 ProteinModelPortal:Q7SCN8
EnsemblFungi:EFNCRT00000009482 GeneID:3879893 KEGG:ncr:NCU09373
Uniprot:Q7SCN8
Length = 772
Score = 214 (80.4 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 102/368 (27%), Positives = 151/368 (41%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISR 65
LPE R + S V+ +V+EL+ N++DAGAT V + + V+V D+GSGIS
Sbjct: 6 LPEDTRRFLGSALVITSPIFLVKELLDNALDAGATTVEILISPNTVDRVEVRDNGSGISP 65
Query: 66 DGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGY 125
LG R TSKL L D++ + G + GFRG ALAS + ++ + I T+
Sbjct: 66 SDFHHLG-RPGHTSKLSSLKDLE-SVGCKSLGFRGVALASAAALAGIAICTRTSAE--SV 121
Query: 126 RKVMKGSK-CLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRI 184
++ S+ + + GT+V DLF PVR K S + VK +
Sbjct: 122 ATILHFSREGVAAARGHKPAPAGTSVCVTDLFGAYPVRLKRATSEATATVLKVKGLLECY 181
Query: 185 ALVHP--KVSFKFIDMESEDELLCTCXXXXXXXXXXXX---FGIEDFSFLDEVNANDGAL 239
AL P K+SFK + + + T + + +D
Sbjct: 182 ALARPQVKLSFKVLGGKQSWSYVPTSGAALKDAVVQVMGRELAAQCMLQTSPFSVSDTET 241
Query: 240 EISGYISSPYDSISVKAFQYVYINS-----RYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
+I + P K Y+ + R +CKGP + + SF + K
Sbjct: 242 KIPQTCNLPLAQQPSKFVFEAYLPTTTADIRKICKGPFISV-DSRPLSFTRGTAKKLKAV 300
Query: 295 F---LKGK-----RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
F KG SK P LN+RCP YD +P K V+F + E VL E
Sbjct: 301 FEKHFKGSLIPENSSKLPGSPFIRLNIRCPLGSYDPNVEPSKYDVLFHNEELVLREFESF 360
Query: 347 IRSAWMKK 354
+ S + K
Sbjct: 361 LLSIYPAK 368
>UNIPROTKB|E2RAQ2 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 CTD:5378 KO:K10864 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:AAEX03017899 RefSeq:XP_536002.1
Ensembl:ENSCAFT00000014945 GeneID:478840 KEGG:cfa:478840
Uniprot:E2RAQ2
Length = 930
Score = 223 (83.6 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 94/372 (25%), Positives = 171/372 (45%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
+ +LP A + S ++ + VV+EL+ NS+DAGAT + V + ++V D+G G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELLENSLDAGATSIDVKLENYGFDKIEVRDNGEG 60
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ ++ TSK+ D+++ T T+GFRGEAL SI V+ + I T+
Sbjct: 61 IKAIDAPVMAVKYY-TSKINSHEDLENLT---TYGFRGEALGSICCVAEVLITTRTASDN 116
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC-- 180
+ V+ GS + + GTTV LF N PVR+++ S+ KK +KK
Sbjct: 117 FSTQYVLDGSGHI-ISQKPSHLGQGTTVTVLKLFKNLPVRKQFY-STAKKCKDEIKKVQD 174
Query: 181 -VLRIALVHPKVSFKFIDMES---EDELLCTCXXXXXXXXXXXXFG-IEDFSFLDEVNAN 235
++ ++ P++ FI ++ + + G +E F + E
Sbjct: 175 LLISYGILKPELRIVFIHNKAVIWQKTRVSDRQVALRAVLGTAVMGNMEPFQYHPE---- 230
Query: 236 DGALEISGYISSPYD------SISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSW 289
D + +SG++ +D S+S +++IN+R V + I KL+ H
Sbjct: 231 DSQIYLSGFLPK-HDVDHSSTSLSTPERSFIFINNRPVHQKDILKLIRHYY--------- 280
Query: 290 KANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
N LK + S+ P + L + P + D+ P K+ V+ ++ E VL +E + +
Sbjct: 281 ---N--LKCLKEASRLYPIFFLKIDVPTADVDVNITPDKSQVLIQNKEAVLIALENLMTT 335
Query: 350 AWMKKIAHDSFD 361
+ + +S++
Sbjct: 336 CYGSLPSTNSYE 347
Score = 46 (21.3 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 1126 NNNISCDIHNQDNILDISSGLLHLTGEFF--IPDSINKSCLEDAK 1168
NN I+ D H D+ +S + T F IP + N SC EDA+
Sbjct: 408 NNQINVDDHCDDHFNSENSNIDKNTRSIFQEIPMN-NLSC-EDAQ 450
Score = 46 (21.3 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 24/136 (17%), Positives = 55/136 (40%)
Query: 422 AEENTEMEFFSQPKHS--SSLLDGSFAE--CLPIVPPKIDHRVWTIESSWFQDHQPS--R 475
A + E++ S+ S S+++D + ++ ++ + + + + QDH+
Sbjct: 532 AYPSPELKNLSESSCSKKSNVVDNKSGQLTAYDLISSRVVKKPMSASALFVQDHRAQFLT 591
Query: 476 HLFSPPLENLKKEGDHLFRKECERITFGDAEKDPAELQEENTEMEYVPQPKYSFGLSDGS 535
LE+ + + L++ E EK +L+ N +++ + + L DG
Sbjct: 592 ENSKTSLEDATVQIEELWKTLSEEEKLKYEEKATKDLERYNRQIKRAIEQESQISLKDGR 651
Query: 536 FAKCLPIVPWKI-DRH 550
K P W + +H
Sbjct: 652 -KKIKPTSAWNLAQKH 666
Score = 45 (20.9 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 18/73 (24%), Positives = 29/73 (39%)
Query: 1288 VDLLEFLQQLADTDGSST---TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1344
+DL E L + + + P V+ L +A R + L + I+ +K
Sbjct: 846 MDLKEILNAILNKNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDVQDIIYRMKDQ 905
Query: 1345 --SLCFQCAHGRP 1355
S +C HGRP
Sbjct: 906 FGSEIKECVHGRP 918
Score = 43 (20.2 bits), Expect = 3.2e-12, Sum P(4) = 3.2e-12
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 572 PLENLSKEGDHLFREECERITFGEFEKHTPELKEENSKRE 611
P+ NLS E ++EC F KHT S R+
Sbjct: 440 PMNNLSCEDA---QKECSETCFVVSVKHTQSENGNKSNRD 476
Score = 38 (18.4 bits), Expect = 3.2e-12, Sum P(4) = 3.2e-12
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 986 RNHNCEPNPIHKELSRRSHS 1005
+N+N P+P K LS S S
Sbjct: 528 QNNNAYPSPELKNLSESSCS 547
>ASPGD|ASPL0000042310 [details] [associations]
symbol:AN1564 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 EMBL:BN001307 GO:GO:0016887
EMBL:AACD01000025 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
OrthoDB:EOG4B5SFH PANTHER:PTHR10073:SF9 RefSeq:XP_659168.1
ProteinModelPortal:Q5BD16 EnsemblFungi:CADANIAT00008194
GeneID:2875649 KEGG:ani:AN1564.2 HOGENOM:HOG000158560 OMA:NGHGIPA
Uniprot:Q5BD16
Length = 867
Score = 202 (76.2 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 64/201 (31%), Positives = 102/201 (50%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISR 65
LP A + S +++ D + +EL+ N++DA AT V V + ++V D+G GI
Sbjct: 6 LPPATVRAIGSTSIISDPYSLAKELLDNALDAFATLVSVEISQDTVGLLQVKDNGHGIPA 65
Query: 66 DGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRPNG 124
D +++ +R TSK+ + D+ G + GFRGEALAS +++S L I T+ P G
Sbjct: 66 DDYMVVCKR-TFTSKIHTVEDLQKVGG-KSLGFRGEALASAAELSGALNISTRVETDPVG 123
Query: 125 YRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRI 184
+ G + VGTTV +LF PVRR+ + KK L +KK V
Sbjct: 124 -SSLEYGRNGELTRTERISHPVGTTVRILNLFQQIPVRRQTAIKNSKKTLLKIKKMVQAY 182
Query: 185 ALVHPKVSFKFIDMESEDELL 205
A+ P + F +++++E L
Sbjct: 183 AMARPSIRLSFKVLKAKNESL 203
Score = 64 (27.6 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P +++ C YD +P K V+F++ + VL+ +E +R +
Sbjct: 316 PFLCVHVLCLGGAYDANIEPSKDDVLFENQQAVLSLVEDLLRDTY 360
Score = 44 (20.5 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 1048 HLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENF-KLSLCPHAHLGAQA 1106
H+ G +AN++PS ++ F +L L E + + LS H G+
Sbjct: 321 HVLCLGGAYDANIEPSKDDVLFE-----NQQAVLSLVEDLLRDTYGDLSNVHEDH-GSTG 374
Query: 1107 EGTSIISGTKWRNG 1120
+G GT RNG
Sbjct: 375 QGR----GTSQRNG 384
>UNIPROTKB|Q5BD16 [details] [associations]
symbol:AN1564.2 "DNA mismatch repair protein, putative
(AFU_orthologue; AFUA_8G05820)" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR015434
Pfam:PF01119 Pfam:PF02518 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 EMBL:BN001307 GO:GO:0016887 EMBL:AACD01000025
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
OrthoDB:EOG4B5SFH PANTHER:PTHR10073:SF9 RefSeq:XP_659168.1
ProteinModelPortal:Q5BD16 EnsemblFungi:CADANIAT00008194
GeneID:2875649 KEGG:ani:AN1564.2 HOGENOM:HOG000158560 OMA:NGHGIPA
Uniprot:Q5BD16
Length = 867
Score = 202 (76.2 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 64/201 (31%), Positives = 102/201 (50%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISR 65
LP A + S +++ D + +EL+ N++DA AT V V + ++V D+G GI
Sbjct: 6 LPPATVRAIGSTSIISDPYSLAKELLDNALDAFATLVSVEISQDTVGLLQVKDNGHGIPA 65
Query: 66 DGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRPNG 124
D +++ +R TSK+ + D+ G + GFRGEALAS +++S L I T+ P G
Sbjct: 66 DDYMVVCKR-TFTSKIHTVEDLQKVGG-KSLGFRGEALASAAELSGALNISTRVETDPVG 123
Query: 125 YRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRI 184
+ G + VGTTV +LF PVRR+ + KK L +KK V
Sbjct: 124 -SSLEYGRNGELTRTERISHPVGTTVRILNLFQQIPVRRQTAIKNSKKTLLKIKKMVQAY 182
Query: 185 ALVHPKVSFKFIDMESEDELL 205
A+ P + F +++++E L
Sbjct: 183 AMARPSIRLSFKVLKAKNESL 203
Score = 64 (27.6 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P +++ C YD +P K V+F++ + VL+ +E +R +
Sbjct: 316 PFLCVHVLCLGGAYDANIEPSKDDVLFENQQAVLSLVEDLLRDTY 360
Score = 44 (20.5 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 1048 HLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENF-KLSLCPHAHLGAQA 1106
H+ G +AN++PS ++ F +L L E + + LS H G+
Sbjct: 321 HVLCLGGAYDANIEPSKDDVLFE-----NQQAVLSLVEDLLRDTYGDLSNVHEDH-GSTG 374
Query: 1107 EGTSIISGTKWRNG 1120
+G GT RNG
Sbjct: 375 QGR----GTSQRNG 384
>GENEDB_PFALCIPARUM|PF11_0184 [details] [associations]
symbol:PF11_0184 "DNA mismatch repair protein
MLH1, putative" species:5833 "Plasmodium falciparum" [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0005634 GO:GO:0016887 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE014186 HSSP:P23367
KO:K08734 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 RefSeq:XP_001347855.1
ProteinModelPortal:Q8IIJ0 EnsemblProtists:PF11_0184:mRNA
GeneID:810731 KEGG:pfa:PF11_0184 EuPathDB:PlasmoDB:PF3D7_1117800
HOGENOM:HOG000282300 OMA:DNNITCN ProtClustDB:CLSZ2500887
Uniprot:Q8IIJ0
Length = 1016
Score = 218 (81.8 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 65/191 (34%), Positives = 99/191 (51%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSG 62
I +L E N + +G V+ ++ELV NS+DA ++ + +++ ++++DDG G
Sbjct: 50 IIKLAEEDINRIAAGEVIIRPCNALKELVENSLDANSSSISIHLNKGGLKSLQIIDDGDG 109
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ L ++ ER TSK+ + D+ + I TFGFRGEALASIS VS L I +K P
Sbjct: 110 IHKEDLRIVCERFT-TSKISNHKDIRN---IKTFGFRGEALASISHVSYLTITSKKRNSP 165
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
Y K K GT + DLFYN P R K M +P + + +
Sbjct: 166 FCYTCNYKDGKPTQDEPTVCSGKNGTIIRFDDLFYNMPARLKTM--NPNDEYNKCLEVLQ 223
Query: 183 RIALVHPKVSF 193
+ A+ +P VSF
Sbjct: 224 KYAIHYPNVSF 234
Score = 49 (22.3 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD--SFDV-- 362
P L+LR + + D+ P K V F E + I + I+ ++K H+ +F++
Sbjct: 486 PWIYLSLRLKYDIVDINVHPTKKEVHFLYQEEISMLIGKKIQE-FLKSF-HNMRTFNITG 543
Query: 363 DMLEDAELPLESS 375
+ L +L + SS
Sbjct: 544 EKLLQTKLDINSS 556
>UNIPROTKB|Q8IIJ0 [details] [associations]
symbol:PF11_0184 "DNA mismatch repair protein MLH1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE014186 HSSP:P23367 KO:K08734
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
RefSeq:XP_001347855.1 ProteinModelPortal:Q8IIJ0
EnsemblProtists:PF11_0184:mRNA GeneID:810731 KEGG:pfa:PF11_0184
EuPathDB:PlasmoDB:PF3D7_1117800 HOGENOM:HOG000282300 OMA:DNNITCN
ProtClustDB:CLSZ2500887 Uniprot:Q8IIJ0
Length = 1016
Score = 218 (81.8 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 65/191 (34%), Positives = 99/191 (51%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSG 62
I +L E N + +G V+ ++ELV NS+DA ++ + +++ ++++DDG G
Sbjct: 50 IIKLAEEDINRIAAGEVIIRPCNALKELVENSLDANSSSISIHLNKGGLKSLQIIDDGDG 109
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ L ++ ER TSK+ + D+ + I TFGFRGEALASIS VS L I +K P
Sbjct: 110 IHKEDLRIVCERFT-TSKISNHKDIRN---IKTFGFRGEALASISHVSYLTITSKKRNSP 165
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
Y K K GT + DLFYN P R K M +P + + +
Sbjct: 166 FCYTCNYKDGKPTQDEPTVCSGKNGTIIRFDDLFYNMPARLKTM--NPNDEYNKCLEVLQ 223
Query: 183 RIALVHPKVSF 193
+ A+ +P VSF
Sbjct: 224 KYAIHYPNVSF 234
Score = 49 (22.3 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD--SFDV-- 362
P L+LR + + D+ P K V F E + I + I+ ++K H+ +F++
Sbjct: 486 PWIYLSLRLKYDIVDINVHPTKKEVHFLYQEEISMLIGKKIQE-FLKSF-HNMRTFNITG 543
Query: 363 DMLEDAELPLESS 375
+ L +L + SS
Sbjct: 544 EKLLQTKLDINSS 556
>UNIPROTKB|G4MRP9 [details] [associations]
symbol:MGG_04627 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR015434 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:CM001231 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF9
RefSeq:XP_003710876.1 ProteinModelPortal:G4MRP9
EnsemblFungi:MGG_04627T0 GeneID:2677851 KEGG:mgr:MGG_04627
Uniprot:G4MRP9
Length = 928
Score = 188 (71.2 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 62/195 (31%), Positives = 97/195 (49%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISR 65
LP+ +R+ V+ VV+EL+ NS+DA AT + V V ++V D+G GI
Sbjct: 6 LPQDAVRLLRAHVVISTPVSVVKELLDNSIDAKATSIEVLVSRNTVDRIEVRDNGVGIET 65
Query: 66 DGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK--AHGRPN 123
LG R TSKL ++++ G + GFRGEALA+++ V+ + + T+ A
Sbjct: 66 RDFEALGRR-GHTSKLKSADELENIGGT-SLGFRGEALAAVAAVAKVTVTTRTAADDTAT 123
Query: 124 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 183
+ + G L I + VGTTV + ++F PVR+K K + +K+ +
Sbjct: 124 VFDLLANGKGTLKNTI--KSTPVGTTVTASEMFERLPVRKKVAIKEAKSTMVKMKQLLTA 181
Query: 184 IALVHP--KVSFKFI 196
AL P K+S K I
Sbjct: 182 YALARPQLKLSIKEI 196
Score = 77 (32.2 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVL 340
GK++K P LN++CP YD++ P K V+F D + ++
Sbjct: 319 GKQAKE---PFIALNIKCPQGSYDVSIGPAKDDVLFTDEQGII 358
>UNIPROTKB|D4A651 [details] [associations]
symbol:D4A651 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GeneTree:ENSGT00530000063289
IPI:IPI00782442 PRIDE:D4A651 Ensembl:ENSRNOT00000043714
ArrayExpress:D4A651 Uniprot:D4A651
Length = 910
Score = 222 (83.2 bits), Expect = 9.7e-13, Sum P(3) = 9.7e-13
Identities = 88/359 (24%), Positives = 163/359 (45%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
+ +LP A + S + + VV+EL+ NS+DAGA + V + +++ D+G+G
Sbjct: 1 MKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGANSIDVKLENYGFDKIEIRDNGAG 60
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + ++ ++ TSK+ D+ T T+GFRGEAL +I +V+ + + T+
Sbjct: 61 IKAVDVPVMAVKYY-TSKISSHEDLQTLT---TYGFRGEALGAICNVAEVVVTTRTAADD 116
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV---LHSVKK 179
+ V+ GS + L GTTV LF N PVRR++ S+PKK L +V+
Sbjct: 117 FSTQYVLDGSGHI-LSQKPSHLGQGTTVTVLKLFKNLPVRRQFY-STPKKCKDELKNVQD 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVN--ANDG 237
++ A++ P + F+ ++ + G ++ V D
Sbjct: 175 LLISYAVLKPDLRITFV--HNKAVIWQKSRVPDHRMALMSVLGTAVMGNMESVERYCEDS 232
Query: 238 ALEISGYI---SSPYDSISVKAFQ--YVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 292
+ + G + ++S S+ + +++INSR V + I KL+ H
Sbjct: 233 QIHLRGLFPKHDADHNSTSLSTPERSFIFINSRPVHQKDILKLIRHYY------------ 280
Query: 293 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
N LK + ++ P + L + P + D+ P K+ V+ ++ E VL +E + + +
Sbjct: 281 N--LKCLKESTRLYPIFFLKIDVPSAEVDINLTPDKSQVLLQNKESVLIALENLLMTCY 337
Score = 49 (22.3 bits), Expect = 9.7e-13, Sum P(3) = 9.7e-13
Identities = 28/104 (26%), Positives = 41/104 (39%)
Query: 962 KTDWLCSVLSSI--EYDNPETQRYKFRNHNCEPNPIH--KELSRRSHSAPPF-----HRH 1012
+TD L + + S +Y N +T F+N N H E H F H +
Sbjct: 365 ETDVLFNKMESSGNKYPNADTLAIPFQNDESRKNTDHHLNEQINIGHCDGHFSGEYSHIN 424
Query: 1013 KRRY--ISLNCCSVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSG 1054
K + I N S EA +S H AG+ +H+Q +G
Sbjct: 425 KDTFQNIPRNNLSSEANQSKHSETH------SAGSIEHIQGENG 462
Score = 39 (18.8 bits), Expect = 9.7e-13, Sum P(3) = 9.7e-13
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 1350 CAHGRPTTVPLVNL 1363
C HGRP L++L
Sbjct: 893 CVHGRPFLHHLIHL 906
Score = 39 (18.8 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 668 SIPVEGDLLNSQRGYEYL-QIEPGVSNGA-SGTASPLDKDEFSN 709
+IP + D + QI G +G SG S ++KD F N
Sbjct: 387 AIPFQNDESRKNTDHHLNEQINIGHCDGHFSGEYSHINKDTFQN 430
Score = 38 (18.4 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 775 SNQSFDSFSRTPLQDEASCSQHLPRLSTAGDI 806
+ +F + R L EA+ S+H +AG I
Sbjct: 424 NKDTFQNIPRNNLSSEANQSKH-SETHSAGSI 454
>RGD|1359511 [details] [associations]
symbol:Pms1 "postmeiotic segregation increased 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006298 "mismatch repair" evidence=ISO]
[GO:0042493 "response to drug" evidence=IEP] InterPro:IPR009071
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
Pfam:PF00505 RGD:1359511 GO:GO:0005524 GO:GO:0042493 GO:GO:0016887
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 HSSP:P23367 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 CTD:5378 HOVERGEN:HBG031886
KO:K10864 EMBL:BC061722 IPI:IPI00421583 RefSeq:NP_001009535.1
UniGene:Rn.47945 ProteinModelPortal:Q6P7D0 SMR:Q6P7D0 STRING:Q6P7D0
GeneID:494322 KEGG:rno:494322 UCSC:RGD:1359511 NextBio:697597
Genevestigator:Q6P7D0 Uniprot:Q6P7D0
Length = 919
Score = 222 (83.2 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 88/359 (24%), Positives = 163/359 (45%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
+ +LP A + S + + VV+EL+ NS+DAGA + V + +++ D+G+G
Sbjct: 1 MKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGANSIDVKLENYGFDKIEIRDNGAG 60
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + ++ ++ TSK+ D+ T T+GFRGEAL +I +V+ + + T+
Sbjct: 61 IKAVDVPVMAVKYY-TSKISSHEDLQTLT---TYGFRGEALGAICNVAEVVVTTRTAADD 116
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV---LHSVKK 179
+ V+ GS + L GTTV LF N PVRR++ S+PKK L +V+
Sbjct: 117 FSTQYVLDGSGHI-LSQKPSHLGQGTTVTVLKLFKNLPVRRQFY-STPKKCKDELKNVQD 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVN--ANDG 237
++ A++ P + F+ ++ + G ++ V D
Sbjct: 175 LLISYAVLKPDLRITFV--HNKAVIWQKSRVPDHRMALMSVLGTAVMGNMESVERYCEDS 232
Query: 238 ALEISGYI---SSPYDSISVKAFQ--YVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 292
+ + G + ++S S+ + +++INSR V + I KL+ H
Sbjct: 233 QIHLRGLFPKHDADHNSTSLSTPERSFIFINSRPVHQKDILKLIRHYY------------ 280
Query: 293 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
N LK + ++ P + L + P + D+ P K+ V+ ++ E VL +E + + +
Sbjct: 281 N--LKCLKESTRLYPIFFLKIDVPSAEVDINLTPDKSQVLLQNKESVLIALENLLMTCY 337
Score = 43 (20.2 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 22/82 (26%), Positives = 33/82 (40%)
Query: 1288 VDLLEFLQQLADTDGSST---TPPSVLRVLNSKACRGAIMFGDSLLPSECA--LIVEELK 1342
+DL E L + + + P V+ L +A R + LP E LI +
Sbjct: 835 MDLKEILNAIVNKNAKEIYECRPRKVINYLEGEAVRLSRQL-PMYLPQEDVQDLIYKMKH 893
Query: 1343 QTSLCFQ-CAHGRPTTVPLVNL 1363
Q + C HGRP L++L
Sbjct: 894 QFGKEIKGCVHGRPFLHHLIHL 915
Score = 42 (19.8 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 27/104 (25%), Positives = 40/104 (38%)
Query: 962 KTDWLCSVLSSI--EYDNPETQRYKFRNHNCEPNPIH--KELSRRSHSAPPF-----HRH 1012
+TD L + + S +Y N +T F+N N H E H F H +
Sbjct: 365 ETDVLFNKMESSGNKYPNADTLAIPFQNDESRKNTDHHLNEQINIGHCDGHFSGEYSHIN 424
Query: 1013 KRRY--ISLNCCSVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSG 1054
K + I N S EA +S H A + +H+Q +G
Sbjct: 425 KDTFQNIPRNNLSSEANQSKHSETH------SADSIEHIQGENG 462
Score = 39 (18.8 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 668 SIPVEGDLLNSQRGYEYL-QIEPGVSNGA-SGTASPLDKDEFSN 709
+IP + D + QI G +G SG S ++KD F N
Sbjct: 387 AIPFQNDESRKNTDHHLNEQINIGHCDGHFSGEYSHINKDTFQN 430
>SGD|S000004777 [details] [associations]
symbol:MLH1 "Protein required for mismatch repair in mitosis
and meiosis" species:4932 "Saccharomyces cerevisiae" [GO:0000710
"meiotic mismatch repair" evidence=IMP] [GO:0006298 "mismatch
repair" evidence=IEA;IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0000404
"loop DNA binding" evidence=IDA] [GO:0032135 "DNA insertion or
deletion binding" evidence=IDA] [GO:0032139 "dinucleotide insertion
or deletion binding" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IMP;IDA]
[GO:0005524 "ATP binding" evidence=IEA;IMP] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000713
"meiotic heteroduplex formation" evidence=IMP] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IPI] [GO:0032390 "MutLbeta complex"
evidence=IPI] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 SGD:S000004777 Prosite:PS00058
GO:GO:0005739 GO:GO:0005524 GO:GO:0016887 EMBL:BK006946
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:Z49705 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0000795 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
GeneTree:ENSGT00550000074923 OrthoDB:EOG43XZBN EMBL:U07187
EMBL:DQ356633 EMBL:DQ356634 EMBL:DQ356635 EMBL:DQ356636
EMBL:DQ356637 EMBL:DQ356638 EMBL:DQ356639 EMBL:DQ356640
EMBL:DQ356641 EMBL:DQ356642 EMBL:DQ356643 EMBL:DQ356644
EMBL:DQ356645 EMBL:DQ356646 PIR:S54525 RefSeq:NP_013890.1
ProteinModelPortal:P38920 SMR:P38920 DIP:DIP-2412N IntAct:P38920
MINT:MINT-625234 STRING:P38920 EnsemblFungi:YMR167W GeneID:855203
KEGG:sce:YMR167W CYGD:YMR167w NextBio:978693 Genevestigator:P38920
GermOnline:YMR167W GO:GO:0000713 GO:GO:0000710 Uniprot:P38920
Length = 769
Score = 210 (79.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 59/166 (35%), Positives = 89/166 (53%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYV-KVVDDGSG 62
I L +V N + +G ++ ++E++ NS+DA AT + + V V ++ D+GSG
Sbjct: 5 IKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGSG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I++ L +L ER TSKL D+ I T+GFRGEALASIS V+ + + TK
Sbjct: 65 INKADLPILCERFT-TSKLQKFEDLSQ---IQTYGFRGEALASISHVARVTVTTKVKEDR 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQS 168
+R K L KD GTT++ DLF+N P R + ++S
Sbjct: 121 CAWRVSYAEGKMLESPKPVAGKD-GTTILVEDLFFNIPSRLRALRS 165
Score = 44 (20.5 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 1132 DIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFI 1178
D ++ LD G+L +IPD + K DA + + +FI
Sbjct: 678 DWEDEQECLD---GILREIALLYIPDMVPKVDTSDASLSEDEKAQFI 721
Score = 43 (20.2 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 424 ENTEMEFFSQPKHSSSLLDGSFAECL 449
E+ + +F ++ +H SSLL+ C+
Sbjct: 714 EDEKAQFINRKEHISSLLEHVLFPCI 739
>DICTYBASE|DDB_G0287393 [details] [associations]
symbol:mlh1 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;ISS;IBA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0032407 "MutSalpha
complex binding" evidence=ISS;IBA] [GO:0016887 "ATPase activity"
evidence=ISS;IBA] [GO:0006200 "ATP catabolic process"
evidence=ISS;IBA] [GO:0005694 "chromosome" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0032390 "MutLbeta
complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0005712 "chiasma" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 dictyBase:DDB_G0287393 Prosite:PS00058
GO:GO:0005524 GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:AAFI02000100 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0000795 eggNOG:COG0323 RefSeq:XP_637285.1 HSSP:P23367
ProteinModelPortal:Q54KD8 STRING:Q54KD8 EnsemblProtists:DDB0232418
GeneID:8626116 KEGG:ddi:DDB_G0287393 KO:K08734 OMA:SIQVVVK
ProtClustDB:CLSZ2846671 GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 Uniprot:Q54KD8
Length = 884
Score = 218 (81.8 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 65/199 (32%), Positives = 107/199 (53%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I+RL + V N + +G V+ + ++EL+ N +DA +T + V V ++++ D+GSG
Sbjct: 63 IHRLTQEVVNKISAGEVIQRPSNALKELLENCLDAKSTTITVTVKDGGMKFLQIQDNGSG 122
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + + ++ ER TSKL +D I +FGFRGEAL+SIS VS L+I+TK P
Sbjct: 123 IRLEDMGIVCERFT-TSKL---TKFEDLRSIQSFGFRGEALSSISHVSHLKILTKTADSP 178
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV-------GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
YR K +++ D GT + DLF+N P R+ ++++ + H
Sbjct: 179 CAYRACYLNGKLTPPSPNEQSSDPKPCAGVNGTQITVEDLFFNTPSRKNVLKNTVDE--H 236
Query: 176 S-VKKCVLRIALVHPKVSF 193
S + + + A+ +P VSF
Sbjct: 237 SRIVLLMKKYAINNPTVSF 255
Score = 45 (20.9 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
P + L P D+ P K+ V E ++ FI++ +
Sbjct: 378 PFMFIRLLVPPKNIDVNIHPTKSEVKILHEEQIIEFIQQKV 418
Score = 39 (18.8 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 29/133 (21%), Positives = 52/133 (39%)
Query: 353 KKIAHDSFDVDMLEDAELPLESSRFXXXXXXXXXXXXPLKNLAKQRDHMFHKECERITFQ 412
K++ ++ F +++ ED EL L LA + + F KEC +
Sbjct: 739 KELLNEYFSIEINEDGELVGIPQVLDHYVPCTDNLPIFLLKLATEVEWEFEKECFAGIVK 798
Query: 413 E----FQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDHRVWTIESSWF 468
E F+ +P L +T++ Q +++ + +F K D + W I+ F
Sbjct: 799 EISSFFKIEPSFLKLRDTQVNNQQQTNSTTTTNNINFI--------KKDGKEWIIQHLIF 850
Query: 469 QDHQPSRHLFSPP 481
P+ SPP
Sbjct: 851 ----PAFRKLSPP 859
Score = 37 (18.1 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 1152 EFFIPDSINKSCLEDAKVLQQVDKK 1176
EFF D + CL+ + L Q KK
Sbjct: 643 EFF-NDCVFVGCLDHSYALVQFGKK 666
>UNIPROTKB|Q9RTR0 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243230 "Deinococcus radiodurans R1" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE000513
GenomeReviews:AE000513_GR eggNOG:COG0323 InterPro:IPR014762
PANTHER:PTHR10073 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
PIR:G75364 RefSeq:NP_295419.1 ProteinModelPortal:Q9RTR0
GeneID:1800018 KEGG:dra:DR_1696 PATRIC:21631024 OMA:ATMACHA
ProtClustDB:CLSK445200 BioCyc:DRAD243230:GH46-2065-MONOMER
Uniprot:Q9RTR0
Length = 547
Score = 170 (64.9 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 59/192 (30%), Positives = 91/192 (47%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP V + +G V+ VV ELV N++DAGA+++ + V G V+V D+GSG
Sbjct: 5 IHVLPPHVARLIAAGEVVSRPLDVVRELVENALDAGASRIEIEVDGGGLERVQVRDNGSG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I+ + L RHA TSKL + + T GFRGEAL + + LE+ T+ +
Sbjct: 65 IAAQSVPLAPARHA-TSKLT-AGPETGSLSVTTLGFRGEALWAAAQAGELELTTRPAAQV 122
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
R +G + + GTTV LF P R + S+ +V + +
Sbjct: 123 GAARLRAQGDA---VEVSRTSAPAGTTVTVSQLFARLPARLRTQASAAAEV-RDITALLG 178
Query: 183 RIALVHPKVSFK 194
R L H + ++
Sbjct: 179 RYVLHHSALHWR 190
Score = 67 (28.6 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 1313 VLNSKACRGAIMFGDSLLPSEC-ALIVEELKQTSLCFQCAHGRPTTVPLVNLEALH 1367
VL AC A+ G +L +E AL++ L++ + C HGRPT + L + H
Sbjct: 476 VLARLACLPALKAG--MLDAERGALVLAALRECEQPWACPHGRPTVLRLSERDLAH 529
Score = 58 (25.5 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 22/80 (27%), Positives = 35/80 (43%)
Query: 1166 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV 1225
D +L + ++ G L V+D HAA ER E L ++ G + E +
Sbjct: 353 DLTLLGVYQELYLLAQGEGDLWVVDAHAAHERALYERLGREL--GTAAPLELPTPELLHL 410
Query: 1226 LPEIGYQLLQNFAEQIKDWG 1245
PE +L + AE ++ WG
Sbjct: 411 TPEQTARLHERGAE-LRGWG 429
>UNIPROTKB|H0YJB4 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR014790
Pfam:PF08676 SMART:SM00853 GO:GO:0005524 GO:GO:0006298
EMBL:AL049780 GO:GO:0030983 PANTHER:PTHR10073 HGNC:HGNC:7128
ChiTaRS:MLH3 Ensembl:ENST00000553713 Uniprot:H0YJB4
Length = 477
Score = 196 (74.1 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 79/283 (27%), Positives = 125/283 (44%)
Query: 1128 NISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLA 1187
+++ IHN + G++H D+ +CL K + + AGG L
Sbjct: 191 SLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGE-------AGGNLL 243
Query: 1188 V-IDQHAADERIRLEEL-----RHKVLSGEGKSV---AYLDAEQELVLPEIGYQLLQNFA 1238
V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL +
Sbjct: 244 VLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCYH 303
Query: 1239 EQIKDWGW-ICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQL 1297
+ ++D G T S + L + L ++ + + E L+ L
Sbjct: 304 KNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLELL 363
Query: 1298 ADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
T G T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+
Sbjct: 364 QTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPS 423
Query: 1357 TVPLVNLEALH--KQI----AQLNNSSELWHGLHRGEISLKRA 1393
+PL +++ L KQI +L ++ W + E +++
Sbjct: 424 MLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 466
>ASPGD|ASPL0000056766 [details] [associations]
symbol:AN0126 species:162425 "Emericella nidulans"
[GO:0000710 "meiotic mismatch repair" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] [GO:0000713
"meiotic heteroduplex formation" evidence=IEA] [GO:0032139
"dinucleotide insertion or deletion binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000404 "loop DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032390 "MutLbeta complex" evidence=IEA] [GO:0032389 "MutLalpha
complex" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005739
GO:GO:0005524 EMBL:BN001308 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
EMBL:AACD01000004 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
OrthoDB:EOG43XZBN GO:GO:0032139 GO:GO:0000404 RefSeq:XP_657730.1
ProteinModelPortal:Q5BH54 STRING:Q5BH54
EnsemblFungi:CADANIAT00002620 GeneID:2875899 KEGG:ani:AN0126.2
Uniprot:Q5BH54
Length = 744
Score = 211 (79.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 59/172 (34%), Positives = 91/172 (52%)
Query: 8 PEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRD 66
P+ V N + +G ++ ++EL+ N+VDAG+T + + V +++ D+G GI RD
Sbjct: 36 PDVV-NKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKEGGLKLLQITDNGHGIDRD 94
Query: 67 GLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYR 126
L +L ER TSKL + +D + I T+GFRGEALASIS ++ L + TK +R
Sbjct: 95 DLPILCERFT-TSKL---KEFEDLSSIATYGFRGEALASISHIAHLTVTTKTADSSCAWR 150
Query: 127 KVMKGSKCL--YLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKK 172
K + G K GT + DLFYN P RR+ +S+ ++
Sbjct: 151 AHYADGKLVPPKPGQSAAPKATAGRGGTQITVEDLFYNVPTRRRAFRSASEE 202
Score = 38 (18.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 15/57 (26%), Positives = 19/57 (33%)
Query: 399 DHMFHKECERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPK 455
D + C I + Q D T + PK SS + D A P P K
Sbjct: 350 DEIIDNICAEIRSKLSQVDSSRTFLTQTLLPSIQTPKRSSQVQDADAAPKTP-APTK 405
>UNIPROTKB|Q5BH54 [details] [associations]
symbol:AN0126.2 "DNA mismatch repair protein Mlh1, putative
(AFU_orthologue; AFUA_5G11700)" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005739 GO:GO:0005524 EMBL:BN001308
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AACD01000004 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 OrthoDB:EOG43XZBN GO:GO:0032139 GO:GO:0000404
RefSeq:XP_657730.1 ProteinModelPortal:Q5BH54 STRING:Q5BH54
EnsemblFungi:CADANIAT00002620 GeneID:2875899 KEGG:ani:AN0126.2
Uniprot:Q5BH54
Length = 744
Score = 211 (79.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 59/172 (34%), Positives = 91/172 (52%)
Query: 8 PEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRD 66
P+ V N + +G ++ ++EL+ N+VDAG+T + + V +++ D+G GI RD
Sbjct: 36 PDVV-NKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKEGGLKLLQITDNGHGIDRD 94
Query: 67 GLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYR 126
L +L ER TSKL + +D + I T+GFRGEALASIS ++ L + TK +R
Sbjct: 95 DLPILCERFT-TSKL---KEFEDLSSIATYGFRGEALASISHIAHLTVTTKTADSSCAWR 150
Query: 127 KVMKGSKCL--YLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKK 172
K + G K GT + DLFYN P RR+ +S+ ++
Sbjct: 151 AHYADGKLVPPKPGQSAAPKATAGRGGTQITVEDLFYNVPTRRRAFRSASEE 202
Score = 38 (18.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 15/57 (26%), Positives = 19/57 (33%)
Query: 399 DHMFHKECERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPK 455
D + C I + Q D T + PK SS + D A P P K
Sbjct: 350 DEIIDNICAEIRSKLSQVDSSRTFLTQTLLPSIQTPKRSSQVQDADAAPKTP-APTK 405
>UNIPROTKB|Q7SA79 [details] [associations]
symbol:NCU08309 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0000795 "synaptonemal
complex" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00018 Prosite:PS00058 GO:GO:0005739 GO:GO:0005524
InterPro:IPR018247 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 EMBL:AABX02000053
HSSP:P23367 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
OrthoDB:EOG43XZBN GO:GO:0000713 GO:GO:0000710 GO:GO:0032139
GO:GO:0000404 RefSeq:XP_962522.1 ProteinModelPortal:Q7SA79
STRING:Q7SA79 EnsemblFungi:EFNCRT00000008399 GeneID:3878663
KEGG:ncr:NCU08309 Uniprot:Q7SA79
Length = 751
Score = 210 (79.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 79/285 (27%), Positives = 126/285 (44%)
Query: 8 PEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRD 66
P+ V N + +G ++ ++EL+ N+VDAG+T + + V +++ D+G GI +
Sbjct: 36 PDVV-NKIAAGEIIVAPVHALKELMENAVDAGSTSLEIVVKDGGLKLLQITDNGCGIDKQ 94
Query: 67 GLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYR 126
L +L ER TSKL D+ I T+GFRGEALASIS ++ L + TK +R
Sbjct: 95 DLPILCERFT-TSKLQKFEDLQS---ISTYGFRGEALASISHIAHLTVTTKTQESNCAWR 150
Query: 127 KVMKGSKCLYL--GIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
K + G + K V GT + DLFYN P RR+ +S+ + + +
Sbjct: 151 AHYGSGKLVPAKPGQSPDPKPVAGRQGTQITVEDLFYNIPTRRRAFRSTSDEY-NKIIDM 209
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDG--A 238
V R A+ V+F + +G + L E + +D
Sbjct: 210 VGRYAVHCSHVAFSCKKYGESSTSIAIQANASSTDRIRQIYGGSVANELIEYSTSDDRWG 269
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
+ G ++ S+ K ++IN R V I K + ASF
Sbjct: 270 FKAQGLATNANYSLK-KTTLLLFINHRCVESSNIRKAVEQTYASF 313
Score = 39 (18.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 1159 INKSCLEDA---KVLQQVDKKFIPVVAGGTLAVIDQHAADERI 1198
IN C+E + K ++Q F+P G + A ER+
Sbjct: 292 INHRCVESSNIRKAVEQTYASFLPK-NGHPFVYLSLEIAPERV 333
Score = 39 (18.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 760 RVCYDKRMDILEADFSNQSFDSFSRT-PLQDEASCSQHLPRLSTAGDITAGFD 811
RVCY+ + DF N F L++ S + R +TA D T D
Sbjct: 533 RVCYEYFYQLGLTDFGNFGTIRFDPPLDLRELLSMAAESERTATA-DATGRVD 584
>UNIPROTKB|F1MW63 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:DAAA02003905 EMBL:DAAA02003906
EMBL:DAAA02003907 IPI:IPI00702663 UniGene:Bt.20671
Ensembl:ENSBTAT00000025019 Uniprot:F1MW63
Length = 932
Score = 210 (79.0 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 91/372 (24%), Positives = 168/372 (45%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
+ +L A + S V+ + VV+EL+ NS+DA AT + V + ++V D+G G
Sbjct: 1 MKQLSAATVRLLSSSQVITSVVSVVKELIENSLDARATSIDVKLENYGFDKIEVRDNGEG 60
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ ++ TSK+ D+++ T T+GFRGEAL SI ++ + I TK
Sbjct: 61 IKAIDAPVMAVKYY-TSKISSHEDLENLT---TYGFRGEALGSICCIAEVSITTKTAADN 116
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC-- 180
+ V+ G + + GTTV + LF N PVR+++ S+ KK +KK
Sbjct: 117 FSTQYVLDGGGHI-ISQKPSHLGQGTTVTALRLFKNLPVRKQFY-STAKKCKDEIKKIQD 174
Query: 181 -VLRIALVHPKVSFKFIDMES---EDELLCTCXXXXXXXXXXXXFG-IEDFSFLDEVNAN 235
++ ++ P V FI ++ + + G +E F + +
Sbjct: 175 LLISYGILKPDVRIVFIHNKAIIWQKTRVSDHKMALMSVLGTTVMGNMESFQY----HCE 230
Query: 236 DGALEISGYISSPYD------SISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSW 289
+ + +SG++ +D S+S +++INSR V + I KL+ H
Sbjct: 231 ESQIFLSGFLPK-HDADHSCTSLSTPERSFIFINSRPVHQKDILKLIRHYY--------- 280
Query: 290 KANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
N LK + ++ P + L + P + D+ P K+ V+ ++ E VL +E + +
Sbjct: 281 ---N--LKCLKESTRLYPIFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTT 335
Query: 350 AWMKKIAHDSFD 361
+ + +S++
Sbjct: 336 RYGSLPSTNSYE 347
Score = 46 (21.3 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 18/73 (24%), Positives = 29/73 (39%)
Query: 1288 VDLLEFLQQLADTDGSST---TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1344
+DL E L + + + P V+ L +A R + L + I+ +K
Sbjct: 848 MDLKEILNAILNKNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDMQDIIYRMKHQ 907
Query: 1345 --SLCFQCAHGRP 1355
+ QC HGRP
Sbjct: 908 FRNEITQCVHGRP 920
Score = 41 (19.5 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 19/119 (15%), Positives = 48/119 (40%)
Query: 437 SSSLLDGSFAE--CLPIVPPKIDHRVWTIESSWFQDHQPS--RHLFSPPLENLKKEGDHL 492
+S+++D + ++ ++ + + + + QDH+ LE+ + + L
Sbjct: 549 NSNVVDNKSGQLTAYDLISNRVIKKPMSASALFVQDHRAQFLTENSKTSLEDATVQIEEL 608
Query: 493 FRKECERITFGDAEKDPAELQEENTEMEYVPQPKYSFGLSDGSFAKCLPIVPWKI-DRH 550
++ E EK +L+ N +++ + + L DG + P W + +H
Sbjct: 609 WKTLSEEEKLKYEEKAAKDLERYNKQIKRAIEQESQVSLKDGK-KRMKPTSVWNLAQKH 666
>UNIPROTKB|F1P0J4 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:AADN02034562 EMBL:AADN02034563
IPI:IPI00590399 PRIDE:F1P0J4 Ensembl:ENSGALT00000003701
Uniprot:F1P0J4
Length = 916
Score = 204 (76.9 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 94/357 (26%), Positives = 159/357 (44%)
Query: 9 EAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDG 67
E VR + S V+ + VV+EL+ NS+DA AT + + + ++V D+G+GI
Sbjct: 7 ETVR-LLSSSQVITSVVSVVKELIENSLDASATTIDIRLENYGFDKIEVRDNGNGIKVAD 65
Query: 68 LVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRK 127
+ ++ +H TSK+ D++ T T+GFRGEAL SI +S + + T+ +
Sbjct: 66 VPVMAIKHY-TSKISSSEDLERLT---TYGFRGEALGSICCISEVLVTTRTADDDISTQY 121
Query: 128 VMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPK-----KVLHS------ 176
V+ S + GTTV LF N PVR+++ ++ K K +H
Sbjct: 122 VLDSSGHV-TSQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTNRKCKEELKKVHDLLIAYG 180
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFG--IEDFSFLDEVNA 234
+ K LRI VH K + S+ ++ C F ED E+N
Sbjct: 181 IIKPELRITFVHNKAVIWQKNRVSDHKMACMSVLGTAVMGSMVPFQHCCED----PEINL 236
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
+ G L + SS S+S ++++NSR P+H+ + K +
Sbjct: 237 S-GFLPKAESDSS-LTSLSSSERSFIFVNSR-----PVHQ-----------KEILKYYSV 278
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
++ + ++ P + LN+ P S D+ P KT V+ + E VL +E ++S +
Sbjct: 279 LMQ--KDSTRLYPVFFLNITVPASAVDVNVTPDKTEVLLQYKESVLLAVENVLKSLY 333
Score = 43 (20.2 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 23/85 (27%), Positives = 33/85 (38%)
Query: 1289 DLLEFLQQLADTDGSST---TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1345
DL E L + + + P V+ L +A R A L + + +KQ
Sbjct: 831 DLKEILNAVVNRNAKEVYECRPLKVINYLEGEAVRLARQLPLHLSKEDVENTIYRMKQ-Q 889
Query: 1346 LCFQ---CAHGRP-----TTVPLVN 1362
L + C HGRP T +P VN
Sbjct: 890 LGKENKGCVHGRPFFHHLTDIPEVN 914
>SGD|S000004025 [details] [associations]
symbol:MLH2 "Protein involved in mismatch repair and meiotic
recombination" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IPI] [GO:0006298 "mismatch repair"
evidence=IEA;IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA;IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032389 "MutLalpha
complex" evidence=IEA;IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR015434
Pfam:PF01119 Pfam:PF02518 SMART:SM00387 SGD:S000004025
Prosite:PS00058 GO:GO:0005524 EMBL:BK006945 GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 eggNOG:COG0323 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 EMBL:Z73207
PIR:S64862 RefSeq:NP_013135.1 ProteinModelPortal:Q07980 SMR:Q07980
DIP:DIP-2413N IntAct:Q07980 MINT:MINT-502091 STRING:Q07980
PRIDE:Q07980 EnsemblFungi:YLR035C GeneID:850722 KEGG:sce:YLR035C
CYGD:YLR035c HOGENOM:HOG000113599 OrthoDB:EOG4B5SFH NextBio:966802
Genevestigator:Q07980 GermOnline:YLR035C PANTHER:PTHR10073:SF9
Uniprot:Q07980
Length = 695
Score = 175 (66.7 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 69/210 (32%), Positives = 101/210 (48%)
Query: 3 TINRL-PEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV----GVCNCYVKVV 57
TI++L PE+ V S + ++ V EL+ NS+D+GA KVF+ V G C Y+ V
Sbjct: 2 TIHQLSPESQWKIV-SSSFIYGPVAAVRELLDNSIDSGAKKVFIDVDSTTGGCE-YISVK 59
Query: 58 DDGSG---ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV----S 110
DDGSG I R + L TSK+ L D+ T T GFRGEAL +S++
Sbjct: 60 DDGSGVDIIDRPSMCL----EYTTSKMSSLGDISILT---TLGFRGEALFLLSNLCNQKG 112
Query: 111 LLEIITKAHGRPNGYRKVMKGSKCLYLGIDDERK-----DVGTTVVSRDLFYNQPVRRKY 165
+++ TK G K + SK GI + ++ VGTTV+ R L R
Sbjct: 113 SMQVETKTADDVIG-EKWLVDSKG---GITNGKRYKVSCPVGTTVILRKLLGGLRARYLE 168
Query: 166 MQSSPKKVLHSVKKCVLRIALVHPKVSFKF 195
+ S P+K + + +L+H + F F
Sbjct: 169 ISSRPRKTFDELIYLINHYSLIHRNIRFYF 198
Score = 68 (29.0 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 309 YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVDMLED 367
+ +NL C L D+ +P K V+ K +E + IE ++ ++I + +ML D
Sbjct: 315 WFINLNCDTKLLDVNIEPEKNDVMIKSFEVIFKKIENKLKLLLEERIG---IETNMLGD 370
Score = 37 (18.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 669 IPVEGDLLNSQRGYEYLQI 687
+P E D++N +R +++L +
Sbjct: 264 VP-ESDVINIKRRFKFLSV 281
>POMBASE|SPBC1703.04 [details] [associations]
symbol:mlh1 "MutL family protein Mlh1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 PomBase:SPBC1703.04 Prosite:PS00058
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0044732
GO:GO:0003677 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 EMBL:D89212 PIR:T43016 PIR:T50317
RefSeq:NP_596199.1 ProteinModelPortal:Q9P7W6 STRING:Q9P7W6
EnsemblFungi:SPBC1703.04.1 GeneID:2539949 KEGG:spo:SPBC1703.04
OrthoDB:EOG43XZBN NextBio:20801092 Uniprot:Q9P7W6
Length = 684
Score = 204 (76.9 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 71/275 (25%), Positives = 131/275 (47%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I L + V N + +G ++ ++EL+ NS+DAG+T + V + +++ D+GSG
Sbjct: 9 IRPLDQLVINKIAAGEIIERPENAIKELIENSLDAGSTSIDVLLKDGGLKLLQITDNGSG 68
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I D L L +R + TSK+ + D+ + TFGFRGEALASIS V+ + ++TK
Sbjct: 69 IQYDDLPYLCQRFS-TSKIDNFNDLQH---LQTFGFRGEALASISHVAKVTVVTKLSSDI 124
Query: 123 NGYRKV-MKGSKC-LYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+ ++ + G+ + G+ + GT + + DLFYN R+ +++ ++
Sbjct: 125 HAWKAFYVDGALAPISPGMSPAPQPCAGKQGTVITAEDLFYNVRSRKSALKNGSEE-FRR 183
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXXXXXFGIEDFSFLDEVNAND 236
+ V + A+ + +VSF + L +G S L + + +
Sbjct: 184 IMILVQKYAIHNDQVSFNCKKVGDTVASLSLSSRLSKADKIRHIYGPRVASHLRDFSLGE 243
Query: 237 GALEISGYISSPY----DSISVKAFQYVYINSRYV 267
G I G+ ++ + D K+ ++IN+R V
Sbjct: 244 GQSSIVGFSANGFISNADFQDKKSNLILFINNRLV 278
Score = 37 (18.1 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 7/28 (25%), Positives = 16/28 (57%)
Query: 1057 NANVKPSSEEEDFRPDFKIESSTILDLE 1084
N+N +++ +D + + +E +DLE
Sbjct: 422 NSNKNATNDIKDLQTEEIVEEGNSIDLE 449
>UNIPROTKB|Q7RE54 [details] [associations]
symbol:PY05214 "HMLH1 gene product-related" species:73239
"Plasmodium yoelii yoelii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 HSSP:P23367 KO:K08734
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 EMBL:AABL01001642
RefSeq:XP_725646.1 ProteinModelPortal:Q7RE54 STRING:Q7RE54
GeneID:3790985 KEGG:pyo:PY05214 EuPathDB:PlasmoDB:PY05214
Uniprot:Q7RE54
Length = 885
Score = 206 (77.6 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 68/186 (36%), Positives = 93/186 (50%)
Query: 13 NTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSGISRDGLVLL 71
N + +G V+ ++ELV NS+DA +T + V + V+++DDG GI +D L ++
Sbjct: 27 NRIAAGEVIIRPCNALKELVENSLDANSTNISVQLNKGGLKSVQIIDDGDGIHKDDLYIV 86
Query: 72 GERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKG 131
ER TSK+ + D I TFGFRGEALASIS VS L I TK + Y K
Sbjct: 87 CERFT-TSKI---SSHKDIRSIKTFGFRGEALASISHVSYLTITTKKRKSSSCYTCSYKD 142
Query: 132 SKCLYLGIDD-ERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC--VLRIALVH 188
K KD GT + DLFYN R K + + + KC VL+ +H
Sbjct: 143 GKPTQKEPTACSGKD-GTIIRFDDLFYNMKTRLKTLNHNDE-----YNKCLDVLQKYSIH 196
Query: 189 -PKVSF 193
P V+F
Sbjct: 197 YPHVTF 202
Score = 44 (20.5 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
P L LR + + D+ P K V F + + I + I +K I
Sbjct: 383 PWVYLALRLKYDIVDINVHPTKKEVHFLYQDEIATLISKKIEQV-LKNI 430
Score = 39 (18.8 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 1327 DSLLPSECALIVEELKQTSLC 1347
D LPSEC I K +C
Sbjct: 565 DRKLPSECDEITSIKKLRKIC 585
>UNIPROTKB|H0YJA3 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0000795 "synaptonemal
complex" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
InterPro:IPR002099 GO:GO:0005524 GO:GO:0008104 GO:GO:0003682
GO:GO:0006298 GO:GO:0019237 GO:GO:0001673 EMBL:AL049780
GO:GO:0007140 GO:GO:0030983 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 PANTHER:PTHR10073 HGNC:HGNC:7128
ChiTaRS:MLH3 Ensembl:ENST00000554697 Bgee:H0YJA3 Uniprot:H0YJA3
Length = 124
Score = 162 (62.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 40/109 (36%), Positives = 58/109 (53%)
Query: 1292 EFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1350
E L+ L T G T P +V +VL S+AC GAI F D L E ++E L L FQC
Sbjct: 5 EQLELLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQC 64
Query: 1351 AHGRPTTVPLVNLEALH--KQI----AQLNNSSELWHGLHRGEISLKRA 1393
AHGRP+ +PL +++ L KQI +L ++ W + E +++
Sbjct: 65 AHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 113
>UNIPROTKB|G3V384 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0000795 "synaptonemal
complex" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 Pfam:PF02518 Prosite:PS00058
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0006298
GO:GO:0019237 GO:GO:0001673 EMBL:AL049780 GO:GO:0007140
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007130
GO:GO:0007144 GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762
PANTHER:PTHR10073 HGNC:HGNC:7128 ChiTaRS:MLH3
ProteinModelPortal:G3V384 SMR:G3V384 Ensembl:ENST00000557648
ArrayExpress:G3V384 Bgee:G3V384 Uniprot:G3V384
Length = 106
Score = 156 (60.0 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 41/107 (38%), Positives = 63/107 (58%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS 110
D + +G R+ TSK + D+++ +GFRGEALA+I+D++
Sbjct: 62 GSDDVEKVGNRYF-TSKCHSVQDLENPR---FYGFRGEALANIADMA 104
>UNIPROTKB|E1BA65 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447
GeneTree:ENSGT00530000063289 EMBL:DAAA02058333 IPI:IPI00699806
Ensembl:ENSBTAT00000037121 OMA:PSDSICE Uniprot:E1BA65
Length = 675
Score = 187 (70.9 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 59/157 (37%), Positives = 82/157 (52%)
Query: 17 SGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLLGERH 75
SG V+ L+ V+ELV NSVDAGAT + + + ++V D+G G+ + L +H
Sbjct: 21 SGQVVLGLSTAVKELVENSVDAGATSIDLRLKDYGVELIEVSDNGCGVEEENFEGLTLKH 80
Query: 76 AATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKGSKCL 135
TSK+ AD+ T + TFGFRGEAL+S+ +S + I T G R V + +
Sbjct: 81 H-TSKIQEFADL---TQVETFGFRGEALSSLCALSDVTISTCHTSVKVGTRLVFDHNGKI 136
Query: 136 YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK 172
R GTTV + LFY PVR K Q + KK
Sbjct: 137 LQKTPYPRPR-GTTVSVQQLFYTLPVRHKEFQRNIKK 172
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 14/66 (21%), Positives = 32/66 (48%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVDMLE 366
P +LN+ + D+ P K ++ ++ + +LA ++ ++ I DV+ L+
Sbjct: 312 PFVVLNVSVDSACVDINVTPDKRQILLQEEKLLLAVLKTSL-------IGMFESDVNKLQ 364
Query: 367 DAELPL 372
++ PL
Sbjct: 365 VSQQPL 370
Score = 39 (18.8 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 678 SQRGYEYLQIEPGVSNGASGTASPLDKDEFSNEFEVSKDIKKPLRLS 724
SQ E + P + SGT L+++E S+ V + +P +LS
Sbjct: 525 SQENMESREKLPETDHRLSGTKCHLNQEESSSTSGV---LPQPTKLS 568
>UNIPROTKB|G3N1K7 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030983 "mismatched DNA binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
Pfam:PF02518 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 GeneTree:ENSGT00530000063289
EMBL:DAAA02058333 Ensembl:ENSBTAT00000065929 Uniprot:G3N1K7
Length = 180
Score = 145 (56.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 38/91 (41%), Positives = 55/91 (60%)
Query: 17 SGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLLGERH 75
SG V+ L+ V+ELV NSVDAGAT + + + ++V D+G G+ + L +H
Sbjct: 90 SGQVVLGLSTAVKELVENSVDAGATSIDLRLKDYGVELIEVSDNGCGVEEENFEGLTLKH 149
Query: 76 AATSKLGHLADMDDATGIGTFGFRGEALASI 106
TSK+ AD+ T + TFGFRGEAL+S+
Sbjct: 150 H-TSKIQEFADL---TQVETFGFRGEALSSL 176
>UNIPROTKB|E9PC40 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122 HGNC:HGNC:9121
ChiTaRS:PMS1 IPI:IPI00386764 ProteinModelPortal:E9PC40 SMR:E9PC40
Ensembl:ENST00000409985 UCSC:uc010zfz.1 ArrayExpress:E9PC40
Bgee:E9PC40 Uniprot:E9PC40
Length = 181
Score = 143 (55.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 42/130 (32%), Positives = 70/130 (53%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
+ +LP A + S ++ + VV+EL+ NS+DAGAT V V + ++V D+G G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ ++ TSK+ D+++ T T+GFRGEAL SI ++ + I T+
Sbjct: 61 IKAVDAPVMAMKYY-TSKINSHEDLENLT---TYGFRGEALGSICCIAEVLITTRTAADN 116
Query: 123 NGYRKVMKGS 132
+ V+ GS
Sbjct: 117 FSTQYVLDGS 126
>UNIPROTKB|Q5XG96 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122
UniGene:Hs.111749 HGNC:HGNC:9121 ChiTaRS:PMS1 EMBL:BC084548
IPI:IPI00479899 SMR:Q5XG96 STRING:Q5XG96 Ensembl:ENST00000374826
HOGENOM:HOG000249052 HOVERGEN:HBG055685 Uniprot:Q5XG96
Length = 165
Score = 143 (55.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 42/130 (32%), Positives = 70/130 (53%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
+ +LP A + S ++ + VV+EL+ NS+DAGAT V V + ++V D+G G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ ++ TSK+ D+++ T T+GFRGEAL SI ++ + I T+
Sbjct: 61 IKAVDAPVMAMKYY-TSKINSHEDLENLT---TYGFRGEALGSICCIAEVLITTRTAADN 116
Query: 123 NGYRKVMKGS 132
+ V+ GS
Sbjct: 117 FSTQYVLDGS 126
>UNIPROTKB|F8W8L1 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
Pfam:PF02518 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468
GO:GO:0030983 InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122
HGNC:HGNC:9121 ChiTaRS:PMS1 IPI:IPI00917668
ProteinModelPortal:F8W8L1 SMR:F8W8L1 Ensembl:ENST00000342075
ArrayExpress:F8W8L1 Bgee:F8W8L1 Uniprot:F8W8L1
Length = 108
Score = 137 (53.3 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 37/112 (33%), Positives = 64/112 (57%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
+ +LP A + S ++ + VV+EL+ NS+DAGAT V V + ++V D+G G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEI 114
I ++ ++ TSK+ D+++ T T+GFRGEAL SI ++ +++
Sbjct: 61 IKAVDAPVMAMKYY-TSKINSHEDLENLT---TYGFRGEALGSICCIAEVQL 108
>UNIPROTKB|O95744 [details] [associations]
symbol:PMS2P2 "Putative postmeiotic segregation increased
2-like protein 2" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131 GO:GO:0032407
GO:GO:0016446 eggNOG:COG0323 GO:GO:0032389 PANTHER:PTHR10073
EMBL:AB017005 IPI:IPI00032884 HSSP:P54278 ProteinModelPortal:O95744
SMR:O95744 STRING:O95744 PaxDb:O95744 PRIDE:O95744
GeneCards:GC07M074880 HGNC:HGNC:9127 neXtProt:NX_O95744
HOVERGEN:HBG108275 InParanoid:O95744 Genevestigator:O95744
Uniprot:O95744
Length = 297
Score = 152 (58.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 53/160 (33%), Positives = 80/160 (50%)
Query: 17 SGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRD---GLVLLG 72
SG V+ L+ V+++V NS+DAGAT + + + ++V +G G+ + GL L
Sbjct: 90 SGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGNGCGVEEENFEGLSLSA 149
Query: 73 ERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKGS 132
+H TSK+ AD+ T + TFGF+G+AL+S+ +S + I T G R V
Sbjct: 150 LKHH-TSKIREFADL---TRVETFGFQGKALSSLCALSDVTISTCHVSAKVGTRLVFDHD 205
Query: 133 KCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK 172
+ GTTV + LF PVR K Q + KK
Sbjct: 206 GKIIKKTPYPHPR-GTTVSVKQLFSTLPVRHKEFQRNIKK 244
>UNIPROTKB|Q0IZT0 [details] [associations]
symbol:Os09g0551900 "Os09g0551900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 EMBL:AP008215 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 GO:GO:0005712 GO:GO:0032390
PANTHER:PTHR10073 KO:K08739 RefSeq:NP_001063871.2 UniGene:Os.73880
GeneID:4347792 KEGG:osa:4347792 Gramene:Q0IZT0
ProtClustDB:CLSN2697919 Uniprot:Q0IZT0
Length = 97
Score = 133 (51.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 77 ATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMK 130
ATSK H +D +FG GEALAS+SD+S++E+ TKA GRPN Y K++K
Sbjct: 7 ATSKF-HNVMVDGEPSSRSFGLNGEALASLSDISVVEVRTKARGRPNSYCKIIK 59
>UNIPROTKB|Q9HE21 [details] [associations]
symbol:B9I2.030 "Related to dna mismatch repair homologue
(Hpms2)" species:5141 "Neurospora crassa" [GO:0000795 "synaptonemal
complex" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014790 Pfam:PF08676 SMART:SM00853 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131 GO:GO:0032407
GO:GO:0000795 eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390
PANTHER:PTHR10073 OrthoDB:EOG46X2HJ HSSP:P54278 EMBL:AL451019
ProteinModelPortal:Q9HE21 Uniprot:Q9HE21
Length = 867
Score = 117 (46.2 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 53/173 (30%), Positives = 80/173 (46%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSG 62
+I LP V ++S TV+ L VV+ L+ NS+DA ATK+ + + V D+G G
Sbjct: 2 SIQPLPGDVIAQIKSSTVITSLNGVVDGLLRNSLDASATKINISIDYSRGNCSVEDNGLG 61
Query: 63 IS-----RDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
I +G LG+ H TS+ D G G+ LAS++ +SLL I +
Sbjct: 62 IPPACFREEGG--LGKLHY-TSRYPPHPDFH--------GRHGQFLASLAALSLLSISSH 110
Query: 118 AHGRPNGYRKVMKGSKCLYLG---IDDERK---DVGTTVVSRDLFYNQPVRRK 164
H + + S+ + + +ER GT V R+LF + PVR K
Sbjct: 111 HHEHRSHNALTIHNSRIVARNTPALPEERLLAFPSGTRVTVRNLFGSMPVRVK 163
Score = 90 (36.7 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 32/90 (35%), Positives = 47/90 (52%)
Query: 1130 SCDIHNQDNI-LDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGT--- 1185
SC H+ + +++++G +T + I++ L A V+ QVDKKFI V T
Sbjct: 619 SCSRHSMGAVNVELTNGGALVT----LQGRISRDALRTAIVVAQVDKKFIFVKLAPTEVD 674
Query: 1186 ------------LAVIDQHAADERIRLEEL 1203
L +IDQHAADERIR+E+L
Sbjct: 675 KVSPSSDVDRSILMLIDQHAADERIRVEDL 704
>UNIPROTKB|A4D2B8 [details] [associations]
symbol:PMS2P1 "Putative postmeiotic segregation increased
2-like protein 1" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0016301 GO:GO:0006298 EMBL:CH236956 EMBL:CH471091
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 PROSITE:PS50109
GO:GO:0030983 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
EMBL:U38964 EMBL:AB017004 EMBL:BC067809 EMBL:BC110395 EMBL:D38435
EMBL:D38499 IPI:IPI00477733 IPI:IPI00871484 IPI:IPI00953669
PIR:JC2398 PIR:JC2399 UniGene:Hs.634244 UniGene:Hs.661055
ProteinModelPortal:A4D2B8 SMR:A4D2B8 STRING:A4D2B8
PhosphoSite:A4D2B8 DMDM:74706301 PaxDb:A4D2B8 PRIDE:A4D2B8
GeneCards:GC07M099899 HGNC:HGNC:9123 MIM:605038 neXtProt:NX_A4D2B8
HOVERGEN:HBG108273 InParanoid:Q13400 ChiTaRS:PMS2P1
Genevestigator:A4D2B8 Uniprot:A4D2B8
Length = 440
Score = 146 (56.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 53/158 (33%), Positives = 77/158 (48%)
Query: 17 SGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLLGERH 75
SG V+ L+ V+ELV NS+DAGAT + + + ++V +G G+ + L +H
Sbjct: 228 SGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCGVEEENFEGLTLKH 287
Query: 76 AATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKG-SKC 134
TSK+ AD+ + TFGFRGEAL+S+ +S + I T G R V K
Sbjct: 288 H-TSKIQEFADLPQ---VETFGFRGEALSSLCALSDVTISTCHVSAKVGTRLVFDHYGKI 343
Query: 135 LYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK 172
+ + G TV + LF PV K Q + KK
Sbjct: 344 IQKTPYPHPR--GMTVSVKQLFSTLPVHHKEFQRNIKK 379
>UNIPROTKB|C9J167 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:AC005995 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR10073 HOGENOM:HOG000165474 HGNC:HGNC:9122
IPI:IPI00604708 ProteinModelPortal:C9J167 SMR:C9J167 STRING:C9J167
Ensembl:ENST00000441476 UCSC:uc003spj.3 ArrayExpress:C9J167
Bgee:C9J167 Uniprot:C9J167
Length = 756
Score = 150 (57.9 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 54/205 (26%), Positives = 94/205 (45%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I+K+ + +++ Q + FI + ++DQHA DE+ E L+ + +G+ L
Sbjct: 562 ISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVL-QGQR---L 617
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
A Q L L + +L E + G+ I ++N + +R + +
Sbjct: 618 IAPQTLNLTAVNEAVLIENLEIFRKNGFDFVI--------DENAPVTERAKLISLPTSKN 669
Query: 1279 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1338
FG DVD L F+ L+D+ G P V ++ S+ACR ++M G +L SE ++
Sbjct: 670 WTFGPQ--DVDELIFM--LSDSPGVMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLI 725
Query: 1339 EELKQTSLCFQCAHGRPTTVPLVNL 1363
+ + + C HGRPT + NL
Sbjct: 726 THMGEMDHPWNCPHGRPTMRHIANL 750
Score = 54 (24.1 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 147 GTTVVSRDLFYNQPVRRKYMQSSPKK 172
GTTV + LF PVR K Q + KK
Sbjct: 48 GTTVSVQQLFSTLPVRHKEFQRNIKK 73
Score = 41 (19.5 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 15/66 (22%), Positives = 32/66 (48%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVDMLE 366
P +LN+ D+ P K ++ ++ + +LA ++ ++ + DS DV+ L
Sbjct: 213 PFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF------DS-DVNKLN 265
Query: 367 DAELPL 372
++ PL
Sbjct: 266 VSQQPL 271
>UNIPROTKB|A8JCH7 [details] [associations]
symbol:CHLREDRAFT_106832 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 GO:GO:0005712 GO:GO:0032390
PANTHER:PTHR10073 EMBL:DS496157 RefSeq:XP_001700137.1
EnsemblPlants:EDO98431 GeneID:5725681 KEGG:cre:CHLREDRAFT_106832
eggNOG:NOG304406 ProtClustDB:CLSN2703724 Uniprot:A8JCH7
Length = 86
Score = 118 (46.6 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRD 66
LP+ + + +R+G L + + V EL+ NS+DA A V + + V DDG GI +
Sbjct: 8 LPKPLVDKIRTGVTLNTVPQAVVELLCNSLDAEARTVLIKLNAATLSFTVEDDGCGICSE 67
Query: 67 GLVLLGERHAATSKLGHLAD 86
L L+G R+ TSKL L D
Sbjct: 68 DLELVGTRYY-TSKLRSLTD 86
>RGD|1305483 [details] [associations]
symbol:Pms2 "PMS2 postmeiotic segregation increased 2 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003697 "single-stranded DNA
binding" evidence=IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IBA] [GO:0016447 "somatic recombination of
immunoglobulin gene segments" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IBA] [GO:0032138 "single base insertion or
deletion binding" evidence=IEA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
[GO:0042493 "response to drug" evidence=IEP] InterPro:IPR002099
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 RGD:1305483 GO:GO:0005524 GO:GO:0042493 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:CH474012 GO:GO:0007131
GO:GO:0032407 GO:GO:0016446 GO:GO:0032389 PANTHER:PTHR10073
GO:GO:0032138 GO:GO:0016447 KO:K10858 GeneTree:ENSGT00530000063289
CTD:5395 IPI:IPI00949952 RefSeq:NP_001099378.1 UniGene:Rn.102072
Ensembl:ENSRNOT00000067021 GeneID:288479 KEGG:rno:288479
NextBio:628138 Uniprot:D4A360
Length = 542
Score = 154 (59.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 56/210 (26%), Positives = 95/210 (45%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I KS + ++L Q + FI L ++DQHAADE+ E L+ + L
Sbjct: 348 IRKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTV---------L 398
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSF--NKNLNLLQRQITVITLLA 1276
A Q L+ P+ N A I++ I + F +++ + +R + +
Sbjct: 399 QA-QRLITPQTLNLTAVNEAVLIEN----LEIFRKNGFDFIIDEDAPVTERAKLISLPTS 453
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1336
FG D+D L F+ L+D+ G P V ++ S+ACR ++M G +L SE
Sbjct: 454 KNWTFGPQ--DIDELIFM--LSDSPGVMCRPSRVRQMFASRACRKSVMIGTALSASEMKK 509
Query: 1337 IVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1366
++ + + + C HGRPT + NL+ +
Sbjct: 510 LISHMGEMDHPWNCPHGRPTMRHIANLDVI 539
Score = 41 (19.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 10/48 (20%), Positives = 22/48 (45%)
Query: 673 GDLLNSQRGYEYLQIEPGVSNGASGTASPLDKDEFSNEFEVSKDIKKP 720
GD ++ ++G + + + G ++P FS++ VS +P
Sbjct: 167 GDCMDREKGEKDSGLSSTSAGSEEGFSTPEVASSFSSDCNVSSPEDRP 214
Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 33/163 (20%), Positives = 54/163 (33%)
Query: 956 SDVPFDKTDWLCSVLSSIEYDNPETQRYKFRNHNCEPN--PIHKELSRRSHSAPPFHRHK 1013
S+ F + S S +PE R N NC + LS H P
Sbjct: 188 SEEGFSTPEVASSFSSDCNVSSPE-DRPSQENTNCGEQFLEVDDHLSGTGHHLKPEDNGY 246
Query: 1014 RRYISLNCCSVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSSEEEDFRPDF 1073
+ SL SNA G + Q++ +V ++ DF
Sbjct: 247 KCRASLP--PTRLSPSNAKRFRTEDRPSNVG----VPQNTSAAEVDVAVKINKKIVLLDF 300
Query: 1074 KIES-----STILDLEETHKAEN----FKLSLCPHAHLGAQAE 1107
+ S + L++ K+E+ F+ +CP + A+ E
Sbjct: 301 SLSSLAKQMKQLQHLKQQSKSEHNYRKFRAKICPGENQAAEDE 343
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 307 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 8 PFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 48
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 295 FLKGKRSKSQACPAYLLNLR 314
F KR S +CP+ +++ R
Sbjct: 131 FPSQKRGVSSSCPSDIISYR 150
>UNIPROTKB|I3LT92 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0045950
"negative regulation of mitotic recombination" evidence=IEA]
[GO:0045190 "isotype switching" evidence=IEA] [GO:0043060 "meiotic
metaphase I plate congression" evidence=IEA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005712 "chiasma"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IEA]
[GO:0000289 "nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA] [GO:0000239 "pachytene" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 Pfam:PF01119 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
GeneTree:ENSGT00550000074923 EMBL:CU993803
Ensembl:ENSSSCT00000027443 Uniprot:I3LT92
Length = 687
Score = 150 (57.9 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 61/202 (30%), Positives = 91/202 (45%)
Query: 65 RDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNG 124
++ L ++ ER TSKL +D I T+GFRGEALASIS V+ + I TK
Sbjct: 1 KEDLDIVCERFT-TSKL---QSFEDLAHISTYGFRGEALASISHVAHVTITTKTADGKCA 56
Query: 125 YRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRI 184
YR K L + GT + DLFYN RRK +++ P + + + V R
Sbjct: 57 YRAHYSDGK-LKAPPKPCAGNQGTQITVEDLFYNISTRRKALKN-PSEEYGKILEVVGRY 114
Query: 185 ALVHPKVSFKFIDMESEDEL-LCTCXXXXXXXXXXXXFGIEDFSFLDEVNANDGAL--EI 241
++ + +SF + + E + T FG L EV D L ++
Sbjct: 115 SIHNSGISFS-VKKQGETVADVRTLPNATTVDNIRSIFGNAVSRELIEVECEDKTLAFKM 173
Query: 242 SGYISSPYDSISVKAFQYVYIN 263
+GYIS+ S+ K ++IN
Sbjct: 174 NGYISNANYSVK-KCIFLLFIN 194
Score = 45 (20.9 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 35/153 (22%), Positives = 57/153 (37%)
Query: 353 KKIAHDSFDVDMLEDAELP-LESSRFXXXXXXXXXXXXPLKNLAKQRDHMFHKEC-ERIT 410
+K +S DV+M+EDA + ++ L+ +R H +E +
Sbjct: 401 RKRHRESSDVEMVEDANRKEMTAACIPRRRIINLTSVLTLQEEINERGHETLREMLHNHS 460
Query: 411 FQEFQKDPVELAEENTEMEFFSQPKHSSSL----LDGSFAEC----LPIVPPKIDHRVWT 462
F LA+ T++ + K S L L FA L P D +
Sbjct: 461 FVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRLSEPAPLFDLAMLA 520
Query: 463 I---ESSWFQDHQPSRHLFSPPLENLKKEGDHL 492
+ ES W ++ P L +E LKK+ + L
Sbjct: 521 LDSPESGWTEEDGPKEGLAEYIVEFLKKKAEML 553
Score = 38 (18.4 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 304 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
QA P+ +L D+ P K V F + +L +++ I S
Sbjct: 217 QAHPSLSTSLEISPQNVDVNVHPTKHEVHFLHEDSILERVQQHIES 262
>UNIPROTKB|Q22CH2 [details] [associations]
symbol:TTHERM_01044360 "Putative uncharacterized protein"
species:312017 "Tetrahymena thermophila SB210" [GO:0000795
"synaptonemal complex" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha
complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR014790 SMART:SM00853 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 GO:GO:0005712 GO:GO:0032390
PANTHER:PTHR10073 EMBL:GG662530 RefSeq:XP_001030620.1
UniGene:Tth.4756 EnsemblProtists:EAR82957 GeneID:7842187
KEGG:tet:TTHERM_01044360 Uniprot:Q22CH2
Length = 319
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 52/241 (21%), Positives = 104/241 (43%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVV--AGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVA 1216
++++ ED ++ + K I G L +DQHA ERIR E ++ +
Sbjct: 84 LDRTIFEDIEIFGNCNNKVIICFNQQKGMLFGLDQHAIHERIRYEYFCNQ-FKASAFCLQ 142
Query: 1217 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGS-------RSFNKNLNLL-QRQ 1268
Y + E+ I +N +Q W T + KN++ L Q +
Sbjct: 143 YKQSRNEIDSKCINLSQ-RNKDKQFPSILWFDQTRTNCLELDAYIFQRLQKNVDKLSQFK 201
Query: 1269 ITVITLLAV----------PCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKA 1318
I V+ + + P ++ +N L+F+ + +++ P ++ ++ SKA
Sbjct: 202 IQVVKIQNINQNKFEVYLWPQLYILNKPITYDLKFIDSILNSE-LGHIPNTIDEIIMSKA 260
Query: 1319 CRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLNNSSE 1378
C+GAI F + L ++ ++++ +K F C HGR + P +LE + + Q+ + +
Sbjct: 261 CKGAIKFNEELNQNQMDMLIKNIKLCEFPFYCVHGRSSIHPFFSLEI--QDVCQIQKNYQ 318
Query: 1379 L 1379
+
Sbjct: 319 I 319
>UNIPROTKB|A8JCH6 [details] [associations]
symbol:CHLREDRAFT_152712 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0003697 "single-stranded DNA
binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR014790 Pfam:PF08676 SMART:SM00853
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
GO:GO:0030983 GO:GO:0007131 GO:GO:0032407 GO:GO:0032389
PANTHER:PTHR10073 EMBL:DS496157 RefSeq:XP_001700136.1
EnsemblPlants:EDO98430 GeneID:5725625 KEGG:cre:CHLREDRAFT_152712
Uniprot:A8JCH6
Length = 329
Score = 128 (50.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 34/78 (43%), Positives = 45/78 (57%)
Query: 1139 ILDISSGLLHLTG--EFFIPDSINKSCLEDAKV---LQQVDKKFIPVV-AGGTLAVIDQH 1192
ILD+ LL L E +P + +S L L+QV+ KFIP V A G+L V+DQH
Sbjct: 85 ILDLERDLLRLQAPHERLVPAEVARSGLATGATGGALRQVEGKFIPTVGADGSLLVVDQH 144
Query: 1193 AADERIRLEELRHKVLSG 1210
AA ER+RLE+L + G
Sbjct: 145 AAHERVRLEQLTQALTLG 162
Score = 42 (19.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 1274 LLAVPCIFGVNLSDVDL 1290
LLAVP + G+ L+ DL
Sbjct: 312 LLAVPVVCGMALTPADL 328
>UNIPROTKB|A8IT98 [details] [associations]
symbol:CHLREDRAFT_101121 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0003697 "single-stranded DNA
binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF08676 SMART:SM00853 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 eggNOG:COG0323 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF9 KO:K10858 EMBL:DS496122 RefSeq:XP_001692227.1
EnsemblPlants:EDP04177 GeneID:5717917 KEGG:cre:CHLREDRAFT_101121
ProtClustDB:CLSN2921379 Uniprot:A8IT98
Length = 193
Score = 85 (35.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 1308 PSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
P V +L S+ACR +IM G L + +++ L + + C HGRPT
Sbjct: 128 PRVRAMLASRACRSSIMVGRPLDRPQMRRVLDRLAELRQPWNCPHGRPT 176
Score = 77 (32.2 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
+VL Q + FI G + ++DQHAADE+ E L+ V +A + L+LP
Sbjct: 2 QVLGQFNLGFILAAHGRDVFIVDQHAADEKTTFERLQRSVALTRQPLLAPMPLPPGLLLP 61
>UNIPROTKB|E9PC65 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 Pfam:PF01119 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC013468 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR10073 EMBL:AC008122
HGNC:HGNC:9121 ChiTaRS:PMS1 IPI:IPI00873522
ProteinModelPortal:E9PC65 SMR:E9PC65 Ensembl:ENST00000424307
UCSC:uc010zgb.1 ArrayExpress:E9PC65 Bgee:E9PC65 Uniprot:E9PC65
Length = 711
Score = 112 (44.5 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 56/261 (21%), Positives = 111/261 (42%)
Query: 101 EALASISDVSLLEIITKAHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQP 160
+A A+ DV L+ I T+ + V+ GS + L GTTV + LF N P
Sbjct: 34 DAGATSVDVKLVLITTRTAADNFSTQYVLDGSGHI-LSQKPSHLGQGTTVTALRLFKNLP 92
Query: 161 VRRKYMQSSPKKVLHSVKKC---VLRIALVHPKVSFKFIDMESEDELLCTCXXXXXXXXX 217
VR+++ S+ KK +KK ++ ++ P + F+ ++ +
Sbjct: 93 VRKQFY-STAKKCKDEIKKIQDLLMSFGILKPDLRIVFV--HNKAVIWQKSRVSDHKMAL 149
Query: 218 XXXFGIEDFSFLD--EVNANDGALEISGYISS-----PYDSISVKAFQYVYINSRYVCKG 270
G + ++ + ++ + + +SG++ + S+S +++INSR V +
Sbjct: 150 MSVLGTAVMNNMESFQYHSEESQIYLSGFLPKCDADHSFTSLSTPERSFIFINSRPVHQK 209
Query: 271 PIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTH 330
I KL+ H N LK + ++ P + L + P + D+ P K+
Sbjct: 210 DILKLIRH-----------HYN---LKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQ 255
Query: 331 VVFKDWEPVLAFIERAIRSAW 351
V+ ++ E VL +E + + +
Sbjct: 256 VLLQNKESVLIALENLMTTCY 276
Score = 65 (27.9 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 21/85 (24%), Positives = 38/85 (44%)
Query: 469 QDHQPSRHLFSPP--LENLKKEGDHLFRKECERITFGDAEKDPAELQEENTEMEYVPQPK 526
QDH+P + +P LE+ + + L++ E EK +L+ N++M+ + +
Sbjct: 522 QDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQE 581
Query: 527 YSFGLSDGSFAKCLPIVPWKI-DRH 550
L DG K P W + +H
Sbjct: 582 SQMSLKDGR-KKIKPTSAWNLAQKH 605
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1403 1363 0.00088 124 3 11 22 0.41 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 132
No. of states in DFA: 635 (67 KB)
Total size of DFA: 644 KB (2282 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 124.57u 0.09s 124.66t Elapsed: 00:00:09
Total cpu time: 124.61u 0.09s 124.70t Elapsed: 00:00:09
Start: Tue May 21 21:16:57 2013 End: Tue May 21 21:17:06 2013
WARNINGS ISSUED: 1