BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000586
(1403 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296088648|emb|CBI37639.3| unnamed protein product [Vitis vinifera]
Length = 1230
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 396/866 (45%), Positives = 501/866 (57%), Gaps = 61/866 (7%)
Query: 570 SSPLENLSKEGDHLFREECERITFGEFEKHTPELKEENSKRELVSQPKYSSKLLDCPFAE 629
SSP+E L++E DH + +I F + T E + + +K V Q S + LD ++
Sbjct: 383 SSPMELLTEENDHFSCRKENKIPFQKLRNDTSEFEGQRNKIGFVHQIDSSFQSLDDSPSK 442
Query: 630 CLSPVLRKIDLHGWTSGNRFSLKGSYFLETCFLADGRSSIPVEGDLLNSQRGYEYLQIEP 689
C+S V + H + F + + FLE F S VE +L S G E L ++
Sbjct: 443 CISGVHPHTE-HLELPDDNFFITKNNFLENKFTVLESSFDHVEDKILGSTWGNESLNVDH 501
Query: 690 GVSNGASGTASPLDKDEFSNEFE-VSKDIKKPLRLSCFSQGSPPLGGPLFSGGEERCESS 748
+ NG S A + EF N E SKD KKP+ SC LG L S ES
Sbjct: 502 DMGNGFS--ALSYNSYEFRNGVEEASKDFKKPILQSC------SLGRSLLSD----WESD 549
Query: 749 TGCFKYKRKRKRVCYDKRMDILEADFSNQSFDSFSRTPLQDEASCSQHLPRLSTAGDITA 808
F+ R R +++D N+SFD F T Q+EAS RL T ++
Sbjct: 550 KFEFQIDGLRTR---QRQID------HNKSFDFFPGTAWQEEASSDWPSSRLKTKPEMCT 600
Query: 809 GFDLMSRASLNLFPSHAEPFTKETNFLSDSIEPVGNSVSDYKALNSVWCSKISDPFPQGA 868
G D MSR SL ++ E F E N DS+E G S + +LNS CS +S Q
Sbjct: 601 GLDFMSRDSLKSLSTYRERFAVENNLPPDSVEQSGKFGSGHLSLNSECCSMVSQSLFQTT 660
Query: 869 SWNDGHFIYNNALEGHSILGEGTSCGQLADTEEN-YKFDYD---SKLRRSNQEKCTTARS 924
W+ HF + N +G S D+E + F +D S + N + +
Sbjct: 661 PWDVEHFTHENTPQGGLGSDRNVSYEHFIDSESGGWIFSHDIMPSSSSQENCSSSSCINT 720
Query: 925 GLRFEYYDNSSEDFCKYLQEHDPCNKFSREHSDVPFDKTDWL-----------------C 967
GL + Y S D + L+E++ N F+ HSD+ +TDWL C
Sbjct: 721 GLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYSKSCGKDNNNNRAVPSC 780
Query: 968 SVLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHSAPPFHRHKRRYISLN-CCSVEA 1026
S+ S E ++ + R NC KE SR SHSAPP +R KR++++LN ++E+
Sbjct: 781 SIPLSTNIHKDENKKERLRYQNCGQIHASKERSR-SHSAPPIYRGKRKFLALNDHWTMES 839
Query: 1027 GKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSSEEEDF---RPDFKIESSTILDL 1083
K + H A PE KH QSSG CN KPS E+ R D K D+
Sbjct: 840 KKVDVIDSHDAPTFPETDELKHPLQSSGACNQYFKPSFLEDPLFYGRSDMKKMLENEPDM 899
Query: 1084 EETHKAENFKLSLCPHAHLGAQA-------EGTSII-SGTKWRNGHPQTTNNNISCDIHN 1135
++ + F+ S C + + E T ++ S +KWRN P+ + + S ++
Sbjct: 900 DKIQNIDIFRKSQCLPIDDDSYSFKDFTTKEATDLMNSESKWRNNCPKIASGDKSQKFND 959
Query: 1136 QDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1195
Q N+LDISSG+LHL G+ IP SI K+CL+DAKVLQQVDKKFIPVVA GTLA+IDQHAAD
Sbjct: 960 QYNVLDISSGILHLAGDSLIPQSITKNCLQDAKVLQQVDKKFIPVVADGTLAIIDQHAAD 1019
Query: 1196 ERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGS 1255
ERIRLEELR KVLSGE K++ YLDAEQELVLPEIGYQLL +AEQI++WGWICNIH Q S
Sbjct: 1020 ERIRLEELRQKVLSGEVKTITYLDAEQELVLPEIGYQLLHTYAEQIQNWGWICNIHAQNS 1079
Query: 1256 RSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLN 1315
RSF KNL+LL ++ TVITLLAVPCI GVNLSDVDLLEFLQQLADTDGSST PPSVLRVLN
Sbjct: 1080 RSFTKNLDLLHKKPTVITLLAVPCILGVNLSDVDLLEFLQQLADTDGSSTMPPSVLRVLN 1139
Query: 1316 SKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLNN 1375
KACRGAIMFGD+LLPSEC+LIVEELK+TSLCFQCAHGRPTTVPLVNLEALHKQIA+L +
Sbjct: 1140 LKACRGAIMFGDALLPSECSLIVEELKRTSLCFQCAHGRPTTVPLVNLEALHKQIAKLGS 1199
Query: 1376 ----SSELWHGLHRGEISLKRASRRL 1397
S ELWHGL R E+SL+RA+ RL
Sbjct: 1200 GGGGSIELWHGLRRHELSLERAAHRL 1225
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 263/475 (55%), Positives = 326/475 (68%), Gaps = 39/475 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M +I LPEAV ++VRSG +LFDLTRVVEEL++NS+DAGATKV V V V CY+KVVDDG
Sbjct: 1 MRSIKPLPEAVHSSVRSGIILFDLTRVVEELIYNSLDAGATKVSVSVSVGTCYIKVVDDG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
+G++RDGLVLLGER+A TSKL HL +MD ATG +FGFRGEAL SISDVSLLEI+TK G
Sbjct: 61 TGVTRDGLVLLGERYA-TSKLHHLTEMDAATG--SFGFRGEALGSISDVSLLEIVTKTQG 117
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
RPNGYRKVMKG KCLYLGIDD+R+DVGTTVV RDLFYNQPVRRKY+QSSPKKVLHSVKKC
Sbjct: 118 RPNGYRKVMKGCKCLYLGIDDDRQDVGTTVVVRDLFYNQPVRRKYLQSSPKKVLHSVKKC 177
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
V RIALVH VSFK +D+ES+DELLCT SSSSPL+LLIS GIED S L E+N DG L+
Sbjct: 178 VFRIALVHSNVSFKVVDIESDDELLCTKSSSSPLSLLISGLGIEDSSSLHELNITDGILK 237
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
+SGY+S P ++ S+KAFQYV I+ SF D WKA++G KR
Sbjct: 238 LSGYVSGPCNTFSIKAFQYVCIH----------------VYSF---DPWKASSGSQDKKR 278
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 360
S+ Q P Y+LNLRCP S YDLTF+P +T V FKDW P+LAF+E+A+ W + IAH
Sbjct: 279 SRCQGYPTYILNLRCPQSHYDLTFEPSRTAVEFKDWVPILAFLEKAVTRFWSEHIAHGES 338
Query: 361 DV---------------DMLEDAELPLESSRFQSHQSSTHLH--SSPLKNLAKQRDHMFH 403
V +++ E E ++ Q + L SSP++ L ++ DH
Sbjct: 339 SVHANKTSGQELWKEHGNVVSAEEDLSEVAKRQCRIQNCLLGCLSSPMELLTEENDHFSC 398
Query: 404 KECERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
++ +I FQ+ + D E + ++ F Q S LD S ++C+ V P +H
Sbjct: 399 RKENKIPFQKLRNDTSEFEGQRNKIGFVHQIDSSFQSLDDSPSKCISGVHPHTEH 453
>gi|359477080|ref|XP_002272829.2| PREDICTED: uncharacterized protein LOC100253902 [Vitis vinifera]
Length = 1218
Score = 607 bits (1565), Expect = e-170, Method: Compositional matrix adjust.
Identities = 396/875 (45%), Positives = 501/875 (57%), Gaps = 70/875 (8%)
Query: 570 SSPLENLSKEGDHLFREECERITFGEFEKHTPELKEENSKRELVSQPKYSSKLLDCPFAE 629
SSP+E L++E DH + +I F + T E + + +K V Q S + LD ++
Sbjct: 362 SSPMELLTEENDHFSCRKENKIPFQKLRNDTSEFEGQRNKIGFVHQIDSSFQSLDDSPSK 421
Query: 630 CLSPVLRKIDLHGWTSGNRFSLKGSYFLETCFLADGRSSIPVEGDLLNSQRGYEYLQIEP 689
C+S V + H + F + + FLE F S VE +L S G E L ++
Sbjct: 422 CISGVHPHTE-HLELPDDNFFITKNNFLENKFTVLESSFDHVEDKILGSTWGNESLNVDH 480
Query: 690 GVSNGASGTASPLDKDEFSNEFE-VSKDIKKPLRLSCFSQGSPPLGGPLFSGGEERCESS 748
+ NG S A + EF N E SKD KKP+ SC LG L S ES
Sbjct: 481 DMGNGFS--ALSYNSYEFRNGVEEASKDFKKPILQSC------SLGRSLLSD----WESD 528
Query: 749 TGCFKYKRKRKRVCYDKRMDILEADFSNQSFDSFSRTPLQDEASCSQHLPRLSTAGDITA 808
F+ R R +++D N+SFD F T Q+EAS RL T ++
Sbjct: 529 KFEFQIDGLRTR---QRQID------HNKSFDFFPGTAWQEEASSDWPSSRLKTKPEMCT 579
Query: 809 GFDLMSRASLNLFPSHAEPFTKETNFLSDSIEPVGNSVSDYKALNSVWCSKISDPFPQGA 868
G D MSR SL ++ E F E N DS+E G S + +LNS CS +S Q
Sbjct: 580 GLDFMSRDSLKSLSTYRERFAVENNLPPDSVEQSGKFGSGHLSLNSECCSMVSQSLFQTT 639
Query: 869 SWNDGHFIYNNALEGHSILGEGTSCGQLADTEEN-YKFDYD---SKLRRSNQEKCTTARS 924
W+ HF + N +G S D+E + F +D S + N + +
Sbjct: 640 PWDVEHFTHENTPQGGLGSDRNVSYEHFIDSESGGWIFSHDIMPSSSSQENCSSSSCINT 699
Query: 925 GLRFEYYDNSSEDFCKYLQEHDPCNKFSREHSDVPFDKTDWL-----------------C 967
GL + Y S D + L+E++ N F+ HSD+ +TDWL C
Sbjct: 700 GLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYSKSCGKDNNNNRAVPSC 759
Query: 968 SVLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHSAPPFHRHKRRYISLN-CCSVEA 1026
S+ S E ++ + R NC KE SR SHSAPP +R KR++++LN ++E+
Sbjct: 760 SIPLSTNIHKDENKKERLRYQNCGQIHASKERSR-SHSAPPIYRGKRKFLALNDHWTMES 818
Query: 1027 GKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSSEEEDF---RPDFKIESSTILDL 1083
K + H A PE KH QSSG CN KPS E+ R D K D+
Sbjct: 819 KKVDVIDSHDAPTFPETDELKHPLQSSGACNQYFKPSFLEDPLFYGRSDMKKMLENEPDM 878
Query: 1084 EETHKAENFKLSLCPHAHLGAQA-------EGTSII-SGTKWRNGHPQTTNNNISCDIHN 1135
++ + F+ S C + + E T ++ S +KWRN P+ + + S ++
Sbjct: 879 DKIQNIDIFRKSQCLPIDDDSYSFKDFTTKEATDLMNSESKWRNNCPKIASGDKSQKFND 938
Query: 1136 QDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1195
Q N+LDISSG+LHL G+ IP SI K+CL+DAKVLQQVDKKFIPVVA GTLA+IDQHAAD
Sbjct: 939 QYNVLDISSGILHLAGDSLIPQSITKNCLQDAKVLQQVDKKFIPVVADGTLAIIDQHAAD 998
Query: 1196 ERIRLEELRHKVLSGEGKSVAYLDAEQELV---------LPEIGYQLLQNFAEQIKDWGW 1246
ERIRLEELR KVLSGE K++ YLDAEQELV LPEIGYQLL +AEQI++WGW
Sbjct: 999 ERIRLEELRQKVLSGEVKTITYLDAEQELVCLCFMLFEVLPEIGYQLLHTYAEQIQNWGW 1058
Query: 1247 ICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTT 1306
ICNIH Q SRSF KNL+LL ++ TVITLLAVPCI GVNLSDVDLLEFLQQLADTDGSST
Sbjct: 1059 ICNIHAQNSRSFTKNLDLLHKKPTVITLLAVPCILGVNLSDVDLLEFLQQLADTDGSSTM 1118
Query: 1307 PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1366
PPSVLRVLN KACRGAIMFGD+LLPSEC+LIVEELK+TSLCFQCAHGRPTTVPLVNLEAL
Sbjct: 1119 PPSVLRVLNLKACRGAIMFGDALLPSECSLIVEELKRTSLCFQCAHGRPTTVPLVNLEAL 1178
Query: 1367 HKQIAQLNN----SSELWHGLHRGEISLKRASRRL 1397
HKQIA+L + S ELWHGL R E+SL+RA+ RL
Sbjct: 1179 HKQIAKLGSGGGGSIELWHGLRRHELSLERAAHRL 1213
Score = 434 bits (1117), Expect = e-118, Method: Compositional matrix adjust.
Identities = 253/475 (53%), Positives = 311/475 (65%), Gaps = 60/475 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M +I LPEAV ++VRSG +LFDLTRVVEEL++NS+DAGATKV V V V CY+KVVDDG
Sbjct: 1 MRSIKPLPEAVHSSVRSGIILFDLTRVVEELIYNSLDAGATKVSVSVSVGTCYIKVVDDG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
+G++RDGLVLLGER+A TSKL HL +MD ATG +FGFRGEAL SISDVSLLEI+TK G
Sbjct: 61 TGVTRDGLVLLGERYA-TSKLHHLTEMDAATG--SFGFRGEALGSISDVSLLEIVTKTQG 117
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
RPNGYRKVMKG KCLYLGIDD+R+DVGTTVV RDLFYNQPVRRKY+QSSPKKVLHSVKKC
Sbjct: 118 RPNGYRKVMKGCKCLYLGIDDDRQDVGTTVVVRDLFYNQPVRRKYLQSSPKKVLHSVKKC 177
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
V RIALVH VSFK +D+ES+DELLCT SSSSPL+LLIS GIED S L E+N DG L+
Sbjct: 178 VFRIALVHSNVSFKVVDIESDDELLCTKSSSSPLSLLISGLGIEDSSSLHELNITDGILK 237
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
+SGY SF D WKA++G KR
Sbjct: 238 LSGY-------------------------------------SF---DPWKASSGSQDKKR 257
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 360
S+ Q P Y+LNLRCP S YDLTF+P +T V FKDW P+LAF+E+A+ W + IAH
Sbjct: 258 SRCQGYPTYILNLRCPQSHYDLTFEPSRTAVEFKDWVPILAFLEKAVTRFWSEHIAHGES 317
Query: 361 DV---------------DMLEDAELPLESSRFQSHQSSTHLH--SSPLKNLAKQRDHMFH 403
V +++ E E ++ Q + L SSP++ L ++ DH
Sbjct: 318 SVHANKTSGQELWKEHGNVVSAEEDLSEVAKRQCRIQNCLLGCLSSPMELLTEENDHFSC 377
Query: 404 KECERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
++ +I FQ+ + D E + ++ F Q S LD S ++C+ V P +H
Sbjct: 378 RKENKIPFQKLRNDTSEFEGQRNKIGFVHQIDSSFQSLDDSPSKCISGVHPHTEH 432
>gi|255561427|ref|XP_002521724.1| conserved hypothetical protein [Ricinus communis]
gi|223539115|gb|EEF40711.1| conserved hypothetical protein [Ricinus communis]
Length = 1137
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 349/770 (45%), Positives = 449/770 (58%), Gaps = 53/770 (6%)
Query: 655 YFLETCFLADGRSSIPVEGDLLNSQRGYEYLQIEPGVSNGASGTASPLDKDEFSNEFEVS 714
YFLE + RSS VE +L+ +++ + +S A +D +F +E EV+
Sbjct: 389 YFLED---STQRSSDHVENHILDLDWQNGSIELRSLEMDESSEKAVSMDYHKFDDELEVT 445
Query: 715 KDIKKPLRLSCFSQGSPPLGGPLFSGGEERCESSTGCFKYKRKRKRVCYDKRMDILEADF 774
K +KP SC S+G+ PL G LFS E+ E FK KR+RVC D+ DIL+ D
Sbjct: 446 KMNEKPFLRSCSSRGNLPLDGSLFSS-EDGLEFPVDGFK--TKRRRVCPDENFDILKLDG 502
Query: 775 SNQSFDSFSRTPLQDEASCSQHLPRLSTAGDITAGFDLMSRASLNLFPSHAEPFTKETNF 834
N F+ T Q A+ SQ S A D+ A FD +S AS E +E F
Sbjct: 503 KNYRFNMLPGTS-QQHATSSQKFSAHSLAVDMLADFDSLSGASAKSISFCGELCVEEKGF 561
Query: 835 LSDSIEPVGNSVSDYKALNSVWCSKISDPFPQGASWNDGHFIYNNALEGHSILGEGTSCG 894
S S+ + S S ++LNS WCS S+ + +SW HF+ ++ EG I G+ S G
Sbjct: 562 GSGSLVHMDTSGSSCQSLNSEWCSLTSEALFRASSWGIDHFLDDSGYEGIDIPGKNASHG 621
Query: 895 QLADTE-ENYKFDYDSKLRRSNQEK----CTTARSGLRFEYYDNSSE-DFCKYLQEHDPC 948
+ AD + N + + + SNQ+ CT+A + +Y D SS DF +
Sbjct: 622 RFADNQGRNGSCSHRVRSKCSNQDNLISSCTSAALDFK-DYADTSSALDFDDCAVTNKDI 680
Query: 949 NKF-----------SREHSDVPFDKTDWLCSVLSS---IEYDNPETQRYKFRNHNCEPNP 994
N F S EH ++ +T L S + + E + F+ + E +
Sbjct: 681 NTFFSQRCNAHDVLSLEHPNISLPETGCLPLRFHSRGHKSHHDYELRESHFKFQDQEQDN 740
Query: 995 IHKELSRRSHSAPPFHRHKRRYISLNCCSVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSG 1054
KE SRRS SAPPF++HKRR++SLN S+ + NAH +H S E KHL
Sbjct: 741 FPKERSRRSQSAPPFYKHKRRFVSLNHHSM-IKEGNAHDIHI---STETDVSKHLY---- 792
Query: 1055 VCNANVKPSSEEEDF---RPDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSI 1111
+P+ E+ R D K +++ ++ET + E+ K +
Sbjct: 793 -----FQPNYAEDLMFCIRSDVKNRQESMMGMKETKEGESLKYL----QNTWVDDSPVKD 843
Query: 1112 ISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQ 1171
+S N NNN S I Q +ILDISSG L+ G +P+S++K+CLEDAKVLQ
Sbjct: 844 LSLANDLNSFVLMQNNNTSSKIDYQHDILDISSGFLYFAGNSLVPESLHKNCLEDAKVLQ 903
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1231
QVD KFIP+VA GTLA+IDQHAADERIRLEELR KVL GE ++V YLD E+EL+LPEIGY
Sbjct: 904 QVDNKFIPIVANGTLAIIDQHAADERIRLEELRQKVLCGEARTVTYLDVEKELILPEIGY 963
Query: 1232 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1291
QLLQN+A QI+DWGWICNI S SF KNLN+L ++ TV+TLLAVPCI VNLSD DLL
Sbjct: 964 QLLQNYAAQIRDWGWICNIQAH-SGSFKKNLNILHQEPTVVTLLAVPCILDVNLSDGDLL 1022
Query: 1292 EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCA 1351
EFLQQLADTDGSST P SVLRVLN KACRGAIMFGDSLL SECALIVEELK+TSLCFQCA
Sbjct: 1023 EFLQQLADTDGSSTMPQSVLRVLNFKACRGAIMFGDSLLRSECALIVEELKKTSLCFQCA 1082
Query: 1352 HGRPTTVPLVNLEALHKQIAQL----NNSSELWHGLHRGEISLKRASRRL 1397
HGRPTTVPLV+L L KQI ++ S ELWHGL R E+S +RA++RL
Sbjct: 1083 HGRPTTVPLVDLVELQKQIVKVGVLDGGSGELWHGLRRQELSFERAAQRL 1132
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/458 (54%), Positives = 309/458 (67%), Gaps = 50/458 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
MGTI RLPE+VRN++RSG +LFDLTRVVEELVFNS+DAGA+KV+VYVG CYVKVVDDG
Sbjct: 1 MGTIKRLPESVRNSMRSGIILFDLTRVVEELVFNSLDAGASKVWVYVGAGTCYVKVVDDG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
GISRDGLVLLG+R+ TSKL H ADMD A +FGFRGEALASISDVSLLEIITKA G
Sbjct: 61 CGISRDGLVLLGQRYV-TSKLHHFADMDAANE--SFGFRGEALASISDVSLLEIITKARG 117
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
RPNGYRKV+KGSKCLYLG++D+RKDVGTTVV RDLFYNQPVRRK MQSS KKVL SVKKC
Sbjct: 118 RPNGYRKVLKGSKCLYLGVNDDRKDVGTTVVVRDLFYNQPVRRKCMQSSLKKVLDSVKKC 177
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
+LRIA VH KVSFK ID+ESEDELL T SS L+LL+SSFGIED +F E++ ++G L+
Sbjct: 178 ILRIAFVHSKVSFKVIDIESEDELLYT-RPSSALSLLMSSFGIEDLNFFHELDVSNGVLK 236
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
+SGYIS P +S+++K F+ D WKAN+ KGKR
Sbjct: 237 LSGYISGPCNSLTIK---------------------------FESLDPWKANSIPQKGKR 269
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH--- 357
+ Q CPAY+LNL CP +LYDLTF+P KTHV FK+W P+L FIE +++ W + +
Sbjct: 270 CRPQVCPAYILNLSCPLALYDLTFEPSKTHVEFKEWIPILNFIENSVQYLWTGSMTYGML 329
Query: 358 --------------DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQ--RDHM 401
D D D++E+ E + + H+ +L S K LA+ D
Sbjct: 330 SHLCIAVHDLYSSFDLLDADLIENNEFARDKHEIKKHKPCNYLPSPQFKMLAQNDVADDY 389
Query: 402 FHKECERITFQEFQKDPVELAEENTEMEFFSQPKHSSS 439
F ++ + + + ++L +N +E S SS
Sbjct: 390 FLEDSTQRSSDHVENHILDLDWQNGSIELRSLEMDESS 427
>gi|356495309|ref|XP_003516521.1| PREDICTED: uncharacterized protein LOC100788019 [Glycine max]
Length = 1208
Score = 504 bits (1299), Expect = e-139, Method: Compositional matrix adjust.
Identities = 345/843 (40%), Positives = 454/843 (53%), Gaps = 100/843 (11%)
Query: 603 LKEENSKRELVSQPKYSSKLLDCPFAECLSPVLRKIDLHGWTSGNRFSLKGSYFLETCFL 662
K + SK + + Q YS LLD +A+C S V+RK + N L+G F
Sbjct: 412 FKVQQSKGDFLLQTGYSGNLLDGSYAKCNSTVMRKHNSLLMHDSNSL-LEGDNFFYGEIP 470
Query: 663 ADGRSSIPVEGDLLNSQRGYEYLQIEPGVSNGASGTASPLDKDEFSN-------EFEVSK 715
A +I V D +S G + ++E V N + + D N + +++
Sbjct: 471 AVESFNIDVPFDAPSSSHGRRFHKVEADVINES------FEDDLLYNSCSGYGYDVKING 524
Query: 716 DIKKPLRLSCFSQGSPPLGGPLFSGGEERCESSTGCFKYKRKRKRVCYDKRMDILEADFS 775
D+++P C GS LF E ++ K+ + Y D+
Sbjct: 525 DLQQPFLKRCSMLGSILHEKALFVNDEHELQTDGFWSKHNTEED---YRSGKDLY----- 576
Query: 776 NQSFDSFSRTPLQDEASCSQHLPRLSTAGDITAGFDLMSRASLNLFPSHAEPFTKETNFL 835
P ++ IT D + R P ++E
Sbjct: 577 ------------------VHRCPEVTKKLKITKDSDFLVR-----------PLSEENCLP 607
Query: 836 SDSIEP---VGNSVSDYKALNSVWCSKISDPFPQGASWNDGHF--IYNNALEGHSILGEG 890
DS +G+S SD + LN W P Q ++ H I + E
Sbjct: 608 PDSCYSALRIGSSGSDDQLLNFEWHPVHQIPSSQASALGVCHTTDIEDELGEISRYYKRI 667
Query: 891 TSCGQLADTEENYKFDYDSKLRRSNQEK--CTTARSGLRFEYYDNSSEDFCKYLQEHDPC 948
D E + +F Y+ R +NQ + + A G F+ + E F + + D
Sbjct: 668 HHTKHFDDREADCRFSYNMS-RNANQHRRASSFANIGFNFDVAGDCGEIFNRLVDRPDFG 726
Query: 949 NKFSREHSDVPFDKTDWLCS---VLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHS 1005
+ S + SD+ ++ DWL S + S + + +R +FRN E N E SRRS S
Sbjct: 727 DIHSSKRSDILNEEPDWLLSKSCIKSCKRPNKNKGKRDRFRNSTLEEN---LERSRRSFS 783
Query: 1006 APPFHRHKRRYISLNCCS-VEAGKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSS 1064
APPFHR KRR+ SLN S + A + + A N EA FK+ QQS + S+
Sbjct: 784 APPFHRSKRRFFSLNHPSEMIAKRQIGRVSNPAFNHQEASNFKYPQQSP----VALHQST 839
Query: 1065 EE---EDFRPDFKIESSTILDLEETHKA-----ENFKLSL-CPHAHLGAQAEGTSIISGT 1115
E+ ++F+ + K + + D+++ A E+F + P L ++ SI GT
Sbjct: 840 EDFLLQEFKINVKQTTEVLGDMQDNDIADIDEFESFNIQKSAPFGELISRDVQDSIDYGT 899
Query: 1116 KWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDK 1175
KWRN P+ T N+ +I +Q+NILDISSG LHL G+ IP++I+K CLEDAKVL QVDK
Sbjct: 900 KWRNCSPKITKNDKLANIQSQNNILDISSGFLHLAGDSLIPETISKKCLEDAKVLHQVDK 959
Query: 1176 KFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV---------- 1225
KFIPVVAG TLAVIDQHAADERIRLEELR KVLSGE K++ YLDAEQELV
Sbjct: 960 KFIPVVAGRTLAVIDQHAADERIRLEELRQKVLSGEEKAITYLDAEQELVCIYESENLIC 1019
Query: 1226 -------LPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
LPEIGYQLL +++EQIKDWGWICNIH Q S SF ++L++L R +TL+AVP
Sbjct: 1020 MIMVIQVLPEIGYQLLHSYSEQIKDWGWICNIHAQNSESFRRSLDILNRPQMAVTLIAVP 1079
Query: 1279 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1338
CI GV L+DVDLLEFLQQLADTDGSST PPSVLRVLN KACRGAIMFGDSLLPSEC+LIV
Sbjct: 1080 CILGVKLNDVDLLEFLQQLADTDGSSTIPPSVLRVLNLKACRGAIMFGDSLLPSECSLIV 1139
Query: 1339 EELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLN----NSSELWHGLHRGEISLKRAS 1394
EELK TSLCFQCAHGRPTTVPLVNLEALH QIA+L SS+ WHGLHR ++ ++RA+
Sbjct: 1140 EELKHTSLCFQCAHGRPTTVPLVNLEALHNQIAKLRLMNERSSDEWHGLHRHKVCIERAA 1199
Query: 1395 RRL 1397
+RL
Sbjct: 1200 QRL 1202
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/462 (50%), Positives = 308/462 (66%), Gaps = 37/462 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M +I LPEAVR+++RSG LFD TRVVEELVFNS+DA ATKV V+V +CY+KVVDDG
Sbjct: 1 MASIKPLPEAVRSSLRSGIFLFDFTRVVEELVFNSLDARATKVSVFVSTRSCYLKVVDDG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
SGI RD L L+GER+A TSK +L D++ + FGFRGEALASIS+VSLLEI+TK +G
Sbjct: 61 SGIPRDELELVGERYA-TSKFLNLVDLNATSE--NFGFRGEALASISEVSLLEIVTKTYG 117
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
RPNGYRKV+KG KCLYLGIDD+RK+VGTTVV RDLFYNQPVRRKYMQSSP KVL S+K C
Sbjct: 118 RPNGYRKVLKGCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRKYMQSSPNKVLQSIKNC 177
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
++R+ALV P +SFK +D+E EDEL CT S+SSPL L+ S FG+E S L + + ++
Sbjct: 178 IMRLALVRPNISFKVVDIEREDELFCTHSASSPLPLVTSGFGVEVASSLHNLEVENDIVK 237
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
+SGYIS P +++ KGP+HKL++ LA + +SW + F KR
Sbjct: 238 LSGYISGPCNTVYT--------------KGPVHKLVSQLANRLEHLNSWNTDKEFRSKKR 283
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA---- 356
++ Q CPAYLLNL CP SLYDL F+P KTHV FKDW P+L FIE+AI+ W + +A
Sbjct: 284 TRCQPCPAYLLNLSCPRSLYDLAFEPSKTHVKFKDWTPILNFIEKAIKQFWEENVACVDP 343
Query: 357 --HDSFDV-DMLEDAELPLESS-------RFQSHQSSTHLHSSPLKNLAKQRDHMFHKEC 406
++ V D E A++ + S+ R Q+ + L S NL + H +
Sbjct: 344 SNEATYMVEDQQEKADVNIISAVSDMSKFRNQNRKDCLDLFFSTSDNLIEDDYH----QS 399
Query: 407 ERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAEC 448
+R F ++ + ++ +F Q +S +LLDGS+A+C
Sbjct: 400 KREDVDYFGATMFKV--QQSKGDFLLQTGYSGNLLDGSYAKC 439
>gi|357484163|ref|XP_003612368.1| MutL DNA mismatch repair protein [Medicago truncatula]
gi|355513703|gb|AES95326.1| MutL DNA mismatch repair protein [Medicago truncatula]
Length = 1293
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 355/893 (39%), Positives = 470/893 (52%), Gaps = 111/893 (12%)
Query: 568 LYSSPLENLSKEGDHLFREECERITFGEFEKHTPELKEENSKRELVSQPKYSSKLLDCPF 627
L+ S + L+++ +H E + + T LKE+ K + Q YS LLD +
Sbjct: 444 LFFSTSDKLNEDDNHQCYREDVITSIDYLYRGTKILKEKQKKGGHLCQTGYSGNLLDVSY 503
Query: 628 AECLSPVLRKIDLHGWTSGNRFSLKGSYFLE-TCFLADG-RSSIPVEGDLLNSQRGYEYL 685
A+ +S +++K + T N +G +FL+ C A+ +IP +S RG +
Sbjct: 504 AKSMSTIMKKSNSF-LTYDNNDLWQGVHFLDGMCPAAESFYDNIPSYAR--SSSRGRKLN 560
Query: 686 QIEPGVSNGASGTASPLDKDEFSNEFEVSKDIKKPLRLSCFSQGSPPLGGPLFSGGEERC 745
+ + G+ + + F + E+ + +KP SC +Q L +E
Sbjct: 561 EEDAGM---ICESFEGYECHGFGYDEEIGWNFQKPFLKSCSTQKDSILNEKTLLVNDE-L 616
Query: 746 ESSTGCFKYKRKRKRVCYDKRMDILEADFSNQSFDSFSRTPLQDEASCSQHLPRLSTAGD 805
+ T F K+ L DF + S D ++R C + +L + D
Sbjct: 617 QLQTDSFWSKQN------------LGEDFCSGSKDLYTRP-------CVEVAKKLKMSED 657
Query: 806 ITAGFDLMSRASLNLFPSHAEPFTKETNFLSDSIEPVGNSVSDYKALNSVWCSKISDPFP 865
+ F + + N P + S +GNS SD + NS W +
Sbjct: 658 --SDFLVKAWPEENCLPLDSWY----------SATQIGNSGSDDRLSNSEWHHVYQESSS 705
Query: 866 QGASWNDGHFIYNNALEGHSI-----------------------LGEGTSCG----QLAD 898
+ + + H N L G S LG + C + D
Sbjct: 706 RATALSVYHTNDINDLAGSSRCNKRIPRTPIFDDKENGNIFSYDLGGASRCSTRITHIFD 765
Query: 899 TEEN-YKFDYDSKLRRSNQEKCTT--ARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREH 955
EEN Y F YD R +NQ+ CT+ A SG F+ + E F + + D + +
Sbjct: 766 DEENGYNFSYDMS-RNANQDPCTSSFANSGFSFDGAVDCKEIFNRLVDWPDFHDTHFTKR 824
Query: 956 SDVPFDKTDWLCSVLSSIEYDNPET---QRYKFRNHNCEPNPIHKELSRRSHSAPPFHRH 1012
SD+ ++ D L I+ + P R FR+ E + S+RS SAPPFHR
Sbjct: 825 SDILIEEPDCLLPESCVIKCNRPNIIKGDRDLFRHPTLEKTRVR---SKRSFSAPPFHRS 881
Query: 1013 KRRYISLNCC-SVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSSEEEDFRP 1071
+RR+ SLN + A + + A + EA FK+ Q S + N ED
Sbjct: 882 RRRFFSLNQPPQMVAKRPSGLASDPASSLLEASDFKYSQHSPDALSPN------NEDLLD 935
Query: 1072 DFKI---ESSTIL------DLEETHKAENFKLSLC-PHAHLGAQAEGTSIISGTKWRNGH 1121
+ K SS +L D ET E+F + P L ++ S+ GTKWR+
Sbjct: 936 NLKTNVKRSSEVLGATQVNDTAETEGFESFNVQQNDPFRELISKEVQDSVDYGTKWRSCA 995
Query: 1122 PQT---TNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFI 1178
PQT + N DI +Q+NILDISSG LHL G+ IPD+I+K CLEDAKVL QVDKKFI
Sbjct: 996 PQTPVMLSKNDKIDIQSQNNILDISSGFLHLAGDSLIPDTISKKCLEDAKVLHQVDKKFI 1055
Query: 1179 PVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFA 1238
P++AG TLAVIDQHA DERIRLE+LR KVLSGE K++ YLDAEQELVLPEIGYQLL ++
Sbjct: 1056 PIMAGRTLAVIDQHAGDERIRLEDLRQKVLSGEAKAITYLDAEQELVLPEIGYQLLHSYR 1115
Query: 1239 EQIKDWGWICNIHTQGSRSFN----------KNLNLLQRQITVITLLAVPCIFGVNLSDV 1288
EQIKDWGWICNIHTQ S SF +NL+LL RQ I L+AVPCI GVNL+DV
Sbjct: 1116 EQIKDWGWICNIHTQNSESFRRYISQAVLLIRNLDLLNRQQMTIALVAVPCILGVNLNDV 1175
Query: 1289 DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1348
DLLEFLQQLADTDGSST PPSV+R+LNSK+CRGAIMFGDSLLPSEC+L+VEELK TSLCF
Sbjct: 1176 DLLEFLQQLADTDGSSTMPPSVVRLLNSKSCRGAIMFGDSLLPSECSLLVEELKHTSLCF 1235
Query: 1349 QCAHGRPTTVPLVNLEALHKQIAQL----NNSSELWHGLHRGEISLKRASRRL 1397
QCAHGRPTTVPLVNLEAL QI +L +SS WHGL R E+S+ RA +RL
Sbjct: 1236 QCAHGRPTTVPLVNLEALRNQIDKLGLMNKSSSNKWHGLQRHEVSIDRAVQRL 1288
Score = 418 bits (1075), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/515 (44%), Positives = 317/515 (61%), Gaps = 62/515 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M T+ LPE+VR+++RS LFD TR+VEELV+NS+DA ATKV V+V + +CY+KVVDDG
Sbjct: 1 MATVRPLPESVRSSIRSAFSLFDFTRIVEELVYNSLDARATKVSVFVDIGSCYLKVVDDG 60
Query: 61 SGISRDGLVLLGERHA------ATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEI 114
GI+RDGL L+GER+ ATSK +LAD++ + FGFRGEALASIS+VSLLEI
Sbjct: 61 GGITRDGLELVGERYGVYSFNFATSKFLNLADLNATSE--NFGFRGEALASISEVSLLEI 118
Query: 115 ITKAHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
+T+A+GRPNGYRKV+KG KC+YLGIDD+RK+VGTTV+ ++FYNQPVRRK +QSSP KVL
Sbjct: 119 VTRAYGRPNGYRKVLKGCKCIYLGIDDDRKEVGTTVIVSEIFYNQPVRRKQIQSSPNKVL 178
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
S+KKCV+R+ALV P +SFK +D+E E EL C+ S++SPL+L+ + FG+E + L E+
Sbjct: 179 QSIKKCVMRLALVCPNISFKVVDIEREYELFCSHSAASPLSLVTTGFGVEVTNSLHELEV 238
Query: 235 NDGALEISGYISSPYDSISVKAFQ------------------------------------ 258
+ ++++GYIS P +++ +K
Sbjct: 239 ENDIIKLTGYISGPCNTLDMKVIHISNAKSQSPISSHRNFWYKMDLLSLEKESNDINICS 298
Query: 259 ----YVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLR 314
++ INS++VCKGP+HKLL+ LA F+ +SW A+N KR + Q CPAY+LNLR
Sbjct: 299 LTLTWLDINSQFVCKGPVHKLLSQLAIRFEHRNSWSADNESQNKKRGRFQPCPAYILNLR 358
Query: 315 CPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA-HDSFD------------ 361
CP SLY L+F+P KT+V FKDW P+L FIE+ I+ W IA DS +
Sbjct: 359 CPRSLYVLSFEPSKTYVEFKDWAPILNFIEKVIKQFWEGSIACGDSSNKASYMVQEDQRE 418
Query: 362 -VDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDPVE 420
VD AE + Q+ + L S L + +H ++E + +
Sbjct: 419 KVDATISAEADISKFGSQNRKDCLDLFFSTSDKLNEDDNHQCYREDVITSIDYLYRGTKI 478
Query: 421 LAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPK 455
L E+ + Q +S +LLD S+A+ + + K
Sbjct: 479 LKEKQKKGGHLCQTGYSGNLLDVSYAKSMSTIMKK 513
>gi|334187192|ref|NP_195277.5| DNA mismatch repair protein MLH3 [Arabidopsis thaliana]
gi|332661126|gb|AEE86526.1| DNA mismatch repair protein MLH3 [Arabidopsis thaliana]
Length = 1169
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 269/583 (46%), Positives = 343/583 (58%), Gaps = 70/583 (12%)
Query: 842 VGNSVSDYKALNSVWCSKISDPFPQGASWNDGHFIYNNALEGHSILGEGTSCGQLADTE- 900
VG+SV+ L+S W S P W + +G IL + G++ D E
Sbjct: 625 VGSSVTGSFCLSSEWSPMYSTP--SATKWESEY------QKGCRILEQSLRLGRMPDPEF 676
Query: 901 -----ENYKFDYDSKLRRSNQEKCTTARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREH 955
N KFD++ + C T F N + Q D K S H
Sbjct: 677 CFSAANNIKFDHEVI---PEMDCCETGTDS--FTAIQNCT-------QLADKICKSSWGH 724
Query: 956 SDVPFDKTDWLCSVLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHSAPPFHRHKRR 1015
+D + D ++ KF + N K+ S+RS SAPPF+R K+R
Sbjct: 725 AD--------------DVRIDQYSIRKEKFSYMDGTQNNAGKQRSKRSRSAPPFYREKKR 770
Query: 1016 YISLNCCSVEAGK----SNAHTLHCAKNSPEAGAFKHLQQS--SGVCNANVKPSSEEEDF 1069
+ISL+C S K S L C P + HL+ S V +++ + +
Sbjct: 771 FISLSCKSDTKPKNSDPSEPDDLECL-TQPCNASQMHLKCSILDDVSYDHIQETEKRLSS 829
Query: 1070 RPDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSIISGTKWRNGHPQTTNNNI 1129
D K + ET + H ++ I S TKWR+ +
Sbjct: 830 ASDLKASAGCRTVHSETQDED-------VHEDFSSEEFLDPIKSTTKWRHNCAVSQVPKE 882
Query: 1130 SCDIHNQDNILDISSGLLHL-TGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAV 1188
S ++H QD + DISSGLLHL + E +P+SIN+ LEDAKVLQQVDKK+IP+VA GT+A+
Sbjct: 883 SHELHGQDGVFDISSGLLHLRSDESLVPESINRHSLEDAKVLQQVDKKYIPIVACGTVAI 942
Query: 1189 IDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQEL--------------VLPEIGYQLL 1234
+DQHAADERIRLEELR KVL+G+ ++V YL A+QEL VLPE+GYQLL
Sbjct: 943 VDQHAADERIRLEELRTKVLAGKARTVTYLSADQELFINDALLIFVLTLKVLPEMGYQLL 1002
Query: 1235 QNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFL 1294
Q+++EQI+DWGWICNI +GS SF KN++++QR+ T ITL AVPCI GVNLSDVDLLEFL
Sbjct: 1003 QSYSEQIRDWGWICNITVEGSTSFKKNMSIIQRKPTPITLNAVPCILGVNLSDVDLLEFL 1062
Query: 1295 QQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGR 1354
QQLADTDGSST PPSVLRVLNSKACRGAIMFGDSLLPSEC+LI++ LKQTSLCFQCAHGR
Sbjct: 1063 QQLADTDGSSTIPPSVLRVLNSKACRGAIMFGDSLLPSECSLIIDGLKQTSLCFQCAHGR 1122
Query: 1355 PTTVPLVNLEALHKQIAQLNNSSELWHGLHRGEISLKRASRRL 1397
PTTVPLV+L+ALHKQIA+L+ ++WHGL R EI+L RA RL
Sbjct: 1123 PTTVPLVDLKALHKQIAKLSG-RQVWHGLQRREITLDRAKSRL 1164
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/361 (55%), Positives = 245/361 (67%), Gaps = 42/361 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M TI LPE VR+++RSG ++FD+ RVVEELVFNS+DAGATKV ++VGV +C VKVVDDG
Sbjct: 1 MKTIKPLPEGVRHSMRSGIIMFDMARVVEELVFNSLDAGATKVSIFVGVVSCSVKVVDDG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
SG+SRD LVLLGER+A TSK +++ A+ TFGFRGEALASISD+SLLE+ TKA G
Sbjct: 61 SGVSRDDLVLLGERYA-TSKFHDFTNVETASE--TFGFRGEALASISDISLLEVRTKAIG 117
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
RPNGYRKVMKGSKCL+LGIDD+RKD GTTV RDLFY+QPVRRKYMQSSPKKVL S+KKC
Sbjct: 118 RPNGYRKVMKGSKCLHLGIDDDRKDSGTTVTVRDLFYSQPVRRKYMQSSPKKVLESIKKC 177
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
V RIALVH VSF +D+ES++EL T SSS +LL+ G E + L +VN DG L
Sbjct: 178 VFRIALVHSNVSFSVLDIESDEELFQTNPSSSAFSLLMRDAGTEAVNSLCKVNVTDGMLN 237
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
+SG F+C+D WK +G G+R
Sbjct: 238 VSG---------------------------------------FECADDWKPTDGQQTGRR 258
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 360
++ Q+ P Y+L + CP LY+ +F+P KTHV FK W PVLAFIER + W K + F
Sbjct: 259 NRLQSNPGYILCIACPRRLYEFSFEPSKTHVEFKKWGPVLAFIERITLANWKKDRILELF 318
Query: 361 D 361
D
Sbjct: 319 D 319
>gi|449456955|ref|XP_004146214.1| PREDICTED: uncharacterized protein LOC101213777 [Cucumis sativus]
Length = 1238
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 262/564 (46%), Positives = 327/564 (57%), Gaps = 75/564 (13%)
Query: 898 DTEENYKFDYDSKLRRSNQE--KCTTARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREH 955
D E+ +FDYD L SN++ K + S + + ++ ED +L++ CN F EH
Sbjct: 680 DDEKGCQFDYDIMLSSSNKKNYKSSCNDSTMIIDDVFDTREDLSTFLKK---CNDF--EH 734
Query: 956 SDVPFDKTD----------WLC---SVLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRR 1002
S P D W + PE F+ C E RR
Sbjct: 735 SS-PRSSPDMHSRQKYFSNWRLPERDCEKAYGSSEPEIGHQAFKQKYCSV-----ERPRR 788
Query: 1003 SHSAPPFHRHKRRYISLNCCSVE--------------AGKSNAHTLHCAK---------- 1038
SAPPF++ K + L+ E A KS+A + +C
Sbjct: 789 GKSAPPFYKRKTSFYCLDQRKAERADAASFYCLNKRKADKSSASSFYCMDQGKVEKLKAS 848
Query: 1039 ---NSP---EAGAFKHLQQSSGVCNANVKP------SSEEEDFRPDFKIESSTILDLEET 1086
+SP E + + SG N VKP E R D S+ + + EE
Sbjct: 849 VFLDSPPHLEPVELRDSEHISGTSNQYVKPFPVDDLLVETRSSRRDTTKMSAIMGNSEEK 908
Query: 1087 H----KAENFKLSLCPHAHLGA----QAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDN 1138
K + + + A + Q + + + + N S ++ +
Sbjct: 909 QGEISKQSQYDVKVTESAIVLTLFHFQNYAQRKLKSPQIYGSNGKIARNEDSHAFDDEVS 968
Query: 1139 ILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERI 1198
ILDISSG L L +PDSI+K+ LEDAKVL Q+DKKFIPVV+GG LAVIDQHAADERI
Sbjct: 969 ILDISSGFLSLASNSLVPDSIDKNFLEDAKVLLQLDKKFIPVVSGGILAVIDQHAADERI 1028
Query: 1199 RLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSF 1258
RLE+LR K+LSGE K+ AYLDAE ELVLPEIGYQLL N+A+Q+K+WGWICNIH Q S+SF
Sbjct: 1029 RLEDLRQKLLSGEAKTTAYLDAEHELVLPEIGYQLLYNYADQVKEWGWICNIHAQDSKSF 1088
Query: 1259 NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKA 1318
NLN+L +Q TVI L+AVPCI GVNLSDVDLLEFL QLADTDGS+T PPSVLRVLNSKA
Sbjct: 1089 RSNLNILHKQETVIMLMAVPCILGVNLSDVDLLEFLHQLADTDGSATMPPSVLRVLNSKA 1148
Query: 1319 CRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL----- 1373
CRGAIMFGDSLLPSEC+L+VEELKQTSLCFQCAHGRPTTVPLVNLEALHKQI +L
Sbjct: 1149 CRGAIMFGDSLLPSECSLLVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKELEIHGR 1208
Query: 1374 NNSSELWHGLHRGEISLKRASRRL 1397
+ S+ W+GL R E+S++R +RL
Sbjct: 1209 SGSNGTWNGLGRQELSIERMLQRL 1232
Score = 418 bits (1075), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/490 (48%), Positives = 311/490 (63%), Gaps = 50/490 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
MGTI LP++VRN+VR+G +L+D+T+VVEELV+NS+DAGA+K+ +++G+ YVKVVD+G
Sbjct: 1 MGTIKPLPKSVRNSVRAGVILYDVTKVVEELVYNSLDAGASKISIFIGIGTSYVKVVDNG 60
Query: 61 SGISRDGLVLLGERHAA-------TSKLGHLADMDDATGIGTFGFRGEALASISDVSLLE 113
SGI+RDGLVLLGER+ TSK L D D+ G TFGFRGEALASISD SL+E
Sbjct: 61 SGITRDGLVLLGERYGKNLNFLLLTSKFHDLIDTDNKGG--TFGFRGEALASISDFSLVE 118
Query: 114 IITKAHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
IIT+A GR NGYRKV+K +LGIDD+ +D GTTV+ RDLFYNQPVRRK+MQSSPKKV
Sbjct: 119 IITRACGRANGYRKVLK-----HLGIDDDMEDFGTTVIVRDLFYNQPVRRKHMQSSPKKV 173
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 233
LH+VKKCV R ALVH KVSFK ++ ES+ LLCT S SPL+LL S FG E L E+
Sbjct: 174 LHAVKKCVFRTALVHSKVSFKIVESESKSILLCTDPSPSPLSLLRSGFGSEVSRSLHELK 233
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVY--------------INSRYVCKGPIHKLLNHL 279
G L++SGYI SP+D+ S+K + Y INSR++CKG IHKLLN L
Sbjct: 234 IGGGDLKLSGYICSPFDNFSIKVDRIHYSVFHEIVWTSARTDINSRFICKGQIHKLLNQL 293
Query: 280 AASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV 339
A+ F D + + F + KR +S+A PAY+LNL CP S YDLTF+ KT V FKDW P+
Sbjct: 294 ASRFTSLDP-QTDLAFHRRKRGRSEANPAYVLNLECPVSFYDLTFESSKTIVQFKDWTPI 352
Query: 340 LAFIERAIRSAWMKK-------------IAHDSFD-----VDMLEDAELPLESSRFQSHQ 381
L F+E AI+ W +K + +S+ + + L ++ SR QS Q
Sbjct: 353 LTFVEEAIQQFWKEKYNCGKSAVHSTPIVGDESWKDEDNTISTKSNDILSVKKSRMQSCQ 412
Query: 382 SSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDPVELAEEN---TEMEFFSQPKHSS 438
+S SP K D + +K C++ + +EL + + +M+F ++ H
Sbjct: 413 ASLIDSFSPSVTFTKHDDILSYKLCDKKACESSHTSSIELDDGDHHLAKMQFSNRADHFP 472
Query: 439 SLLDGSFAEC 448
D A+C
Sbjct: 473 KSWDTPLAKC 482
>gi|297802396|ref|XP_002869082.1| hypothetical protein ARALYDRAFT_328199 [Arabidopsis lyrata subsp.
lyrata]
gi|297314918|gb|EFH45341.1| hypothetical protein ARALYDRAFT_328199 [Arabidopsis lyrata subsp.
lyrata]
Length = 1119
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 295/712 (41%), Positives = 374/712 (52%), Gaps = 100/712 (14%)
Query: 707 FSNEFEVSKDIKKPLRLSCFSQGSPPLGGPLFSGGEERCESSTGCFKYKRKRKRVCYDKR 766
+E +VS I K L C S+ S L P S GE K+ RV
Sbjct: 482 LKDELDVSNCIGKHLLRGCSSRVSLTLHEPKLSHGEGSESVMPMILNEKQSSPRV----- 536
Query: 767 MDILEADFSNQSFDSFS-RTPLQDEASCSQHL----PRLST-AGDITAGFDLMSRASLNL 820
LE D FS RTP S Q P+ S+ G + G D N+
Sbjct: 537 ---LETREGGSYCDVFSDRTPNCSLGSSWQDTDWFTPQCSSDMGSVGIGKDS------NI 587
Query: 821 FPSHAEPFTKETNFLSD----SIEPVGNSVSDYKALNSVWCSKISDPFPQGASWNDGHFI 876
P F + + S VGNSV+ +L+S W S P W
Sbjct: 588 IPIGTAEFGSYEDKVGREKYHSYVNVGNSVTGSFSLSSEWSPMFSTP--SATKWE----- 640
Query: 877 YNNALEGHSILGEGTSCGQLADTE------ENYKFDYDSKLRRSNQEKCTTARSGLRFEY 930
++ +G IL G++ D E N FD++ + T A S +
Sbjct: 641 -SDYQKGCRILERSLRLGRMPDPEFCFSAANNINFDHEVIPEMDCWK--TGADSFTDIQN 697
Query: 931 YDNSSEDFCKYLQEHDPCNKFSREHSDVPFDKTDWLCSVLSSIEYDNPETQRYKFRNHNC 990
S E FCK EH + E + DK Y + H
Sbjct: 698 SIKSDEIFCKSSWEH--ADDVGIEQYSIRKDKFS------------------YGTQYH-- 735
Query: 991 EPNPIHKELSRRSHSAPPFHRHKRRYISLNCCSVEAGK----SNAHTLHCAKNSPEAGAF 1046
+ K+ S+RS SAPPF R K+R+ISL+C S K S L C A
Sbjct: 736 ----VGKQRSKRSRSAPPFCREKKRFISLSCISDTKSKNSDPSEPDDLECLTQPCNAS-- 789
Query: 1047 KHLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQA 1106
H+ + + N++ + + D K + ET + + ++
Sbjct: 790 -HMHLKCNILDDNIQETEKRLSSASDLKASAGCRTVHSETQDEDGGE-------DFSSEE 841
Query: 1107 EGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHL-TGEFFIPDSINKSCLE 1165
I S TKWR+ + S ++H+QD++LDISSGLLHL + E +P+SIN+ LE
Sbjct: 842 NLDPIKSTTKWRHNCAVSQVGKESHELHDQDSVLDISSGLLHLRSDESLVPESINRHSLE 901
Query: 1166 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV 1225
DAKVLQQVDKK+IP+VA GT+A++DQHAADERIRLEELR KVL
Sbjct: 902 DAKVLQQVDKKYIPIVACGTVAIVDQHAADERIRLEELRKKVL----------------- 944
Query: 1226 LPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNL 1285
PE+GYQLLQ++AEQI+DWGWICNI+ +GS SF KN++++QR+ T ITL AVPCI GVNL
Sbjct: 945 -PEMGYQLLQSYAEQIRDWGWICNINVEGSTSFKKNMSIIQRKSTPITLNAVPCILGVNL 1003
Query: 1286 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1345
SDVDLLEFLQQLADTDGSST PPSVLRVLNSKACRGAIMFGDSLLPSEC+LI++ LKQTS
Sbjct: 1004 SDVDLLEFLQQLADTDGSSTIPPSVLRVLNSKACRGAIMFGDSLLPSECSLIIDGLKQTS 1063
Query: 1346 LCFQCAHGRPTTVPLVNLEALHKQIAQLNNSSELWHGLHRGEISLKRASRRL 1397
LCFQCAHGRPTTVPLVNL+ALHKQIA+L+ ++WHG R EI+L RA RL
Sbjct: 1064 LCFQCAHGRPTTVPLVNLKALHKQIAKLSG-RQVWHGFQRREITLDRAKSRL 1114
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/353 (55%), Positives = 243/353 (68%), Gaps = 42/353 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M TI LPE VR+++RSG ++FD++RVVEE+VFNS+DAGATKV ++VGV +C VKVVDDG
Sbjct: 1 MKTIKPLPEGVRHSMRSGIIMFDMSRVVEEIVFNSLDAGATKVSIFVGVVSCSVKVVDDG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
SG+SRD LVLLGER+A TSK +++ T +FGFRGEALASISD+SLLE+ TKA G
Sbjct: 61 SGVSRDDLVLLGERYA-TSKFHDFTNVE--TAGESFGFRGEALASISDISLLEVRTKAIG 117
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
RPNGYRKVMKGSKCL+LGIDD+RKD GTTV RDLFY+QPVRRKYMQSSPKKVL S+KKC
Sbjct: 118 RPNGYRKVMKGSKCLHLGIDDDRKDSGTTVTVRDLFYSQPVRRKYMQSSPKKVLESIKKC 177
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
V RIALVH VSF +D+ES++EL T SSS +LL+ G E + L +VN DG L
Sbjct: 178 VFRIALVHSNVSFSVLDIESDEELFQTNPSSSAFSLLMRDAGTEAVNSLCKVNVTDGMLN 237
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
+SG F+C+D WK +G G+R
Sbjct: 238 VSG---------------------------------------FECADDWKPTDGQQTGRR 258
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
++ Q+ P Y+L + CP LY+ +F+P KTHV FK W PVLA IER + ++W K
Sbjct: 259 NRLQSNPGYILCITCPRHLYEFSFEPSKTHVEFKKWGPVLALIERIVLASWKK 311
>gi|3367570|emb|CAA20022.1| putative protein [Arabidopsis thaliana]
gi|7270503|emb|CAB80268.1| putative protein [Arabidopsis thaliana]
Length = 1151
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 260/569 (45%), Positives = 334/569 (58%), Gaps = 60/569 (10%)
Query: 842 VGNSVSDYKALNSVWCSKISDPFPQGASWNDGHFIYNNALEGHSILGEGTSCGQLADTE- 900
VG+SV+ L+S W S P W + +G IL + G++ D E
Sbjct: 625 VGSSVTGSFCLSSEWSPMYSTP--SATKWESEY------QKGCRILEQSLRLGRMPDPEF 676
Query: 901 -----ENYKFDYDSKLRRSNQEKCTTARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREH 955
N KFD++ + C T F N + Q D K S H
Sbjct: 677 CFSAANNIKFDHEVI---PEMDCCETGTDS--FTAIQNCT-------QLADKICKSSWGH 724
Query: 956 SDVPFDKTDWLCSVLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHSAPPFHRHKRR 1015
+D + D ++ KF + N K+ S+RS SAPPF+R K+R
Sbjct: 725 AD--------------DVRIDQYSIRKEKFSYMDGTQNNAGKQRSKRSRSAPPFYREKKR 770
Query: 1016 YISLNCCSVEAGK----SNAHTLHCAKNSPEAGAFKHLQQS--SGVCNANVKPSSEEEDF 1069
+ISL+C S K S L C P + HL+ S V +++ + +
Sbjct: 771 FISLSCKSDTKPKNSDPSEPDDLECL-TQPCNASQMHLKCSILDDVSYDHIQETEKRLSS 829
Query: 1070 RPDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSIISGTKWRNGHPQTTNNNI 1129
D K + ET + H ++ I S TKWR+ +
Sbjct: 830 ASDLKASAGCRTVHSETQDED-------VHEDFSSEEFLDPIKSTTKWRHNCAVSQVPKE 882
Query: 1130 SCDIHNQDNILDISSGLLHL-TGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAV 1188
S ++H QD + DISSGLLHL + E +P+SIN+ LEDAKVLQQVDKK+IP+VA GT+A+
Sbjct: 883 SHELHGQDGVFDISSGLLHLRSDESLVPESINRHSLEDAKVLQQVDKKYIPIVACGTVAI 942
Query: 1189 IDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWIC 1248
+DQHAADERIRLEELR K ++ + + L + VLPE+GYQLLQ+++EQI+DWGWIC
Sbjct: 943 VDQHAADERIRLEELRTKFIN-DALLIFVLTLK---VLPEMGYQLLQSYSEQIRDWGWIC 998
Query: 1249 NIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPP 1308
NI +GS SF KN++++QR+ T ITL AVPCI GVNLSDVDLLEFLQQLADTDGSST PP
Sbjct: 999 NITVEGSTSFKKNMSIIQRKPTPITLNAVPCILGVNLSDVDLLEFLQQLADTDGSSTIPP 1058
Query: 1309 SVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHK 1368
SVLRVLNSKACRGAIMFGDSLLPSEC+LI++ LKQTSLCFQCAHGRPTTVPLV+L+ALHK
Sbjct: 1059 SVLRVLNSKACRGAIMFGDSLLPSECSLIIDGLKQTSLCFQCAHGRPTTVPLVDLKALHK 1118
Query: 1369 QIAQLNNSSELWHGLHRGEISLKRASRRL 1397
QIA+L+ ++WHGL R EI+L RA RL
Sbjct: 1119 QIAKLSG-RQVWHGLQRREITLDRAKSRL 1146
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/361 (55%), Positives = 245/361 (67%), Gaps = 42/361 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M TI LPE VR+++RSG ++FD+ RVVEELVFNS+DAGATKV ++VGV +C VKVVDDG
Sbjct: 1 MKTIKPLPEGVRHSMRSGIIMFDMARVVEELVFNSLDAGATKVSIFVGVVSCSVKVVDDG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
SG+SRD LVLLGER+A TSK +++ A+ TFGFRGEALASISD+SLLE+ TKA G
Sbjct: 61 SGVSRDDLVLLGERYA-TSKFHDFTNVETASE--TFGFRGEALASISDISLLEVRTKAIG 117
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
RPNGYRKVMKGSKCL+LGIDD+RKD GTTV RDLFY+QPVRRKYMQSSPKKVL S+KKC
Sbjct: 118 RPNGYRKVMKGSKCLHLGIDDDRKDSGTTVTVRDLFYSQPVRRKYMQSSPKKVLESIKKC 177
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
V RIALVH VSF +D+ES++EL T SSS +LL+ G E + L +VN DG L
Sbjct: 178 VFRIALVHSNVSFSVLDIESDEELFQTNPSSSAFSLLMRDAGTEAVNSLCKVNVTDGMLN 237
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
+SG F+C+D WK +G G+R
Sbjct: 238 VSG---------------------------------------FECADDWKPTDGQQTGRR 258
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 360
++ Q+ P Y+L + CP LY+ +F+P KTHV FK W PVLAFIER + W K + F
Sbjct: 259 NRLQSNPGYILCIACPRRLYEFSFEPSKTHVEFKKWGPVLAFIERITLANWKKDRILELF 318
Query: 361 D 361
D
Sbjct: 319 D 319
>gi|400202059|gb|AFP73613.1| mutL-like protein 3 [Hordeum vulgare subsp. vulgare]
Length = 1208
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/375 (51%), Positives = 262/375 (69%), Gaps = 4/375 (1%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M I RLP++V +++RS +L DL RVVEELV+NS+DA A K+ V V V CYVKV DDG
Sbjct: 1 MQNIKRLPKSVHSSLRSSIILSDLPRVVEELVYNSIDANAKKIDVSVNVRACYVKVEDDG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
GI+RD LVLLGE++A + + D + ++ +FG GEALAS+SD+S++E+ TKA G
Sbjct: 61 CGIARDELVLLGEKYATSKFYDVMGDAESSSR--SFGLNGEALASLSDISVVEVRTKARG 118
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
RPN Y K++KGSKC +LGIDD+R+ VGTTVV+R+LFYNQPVRRK MQS K+ LH+VKKC
Sbjct: 119 RPNSYCKIIKGSKCSHLGIDDQREAVGTTVVARELFYNQPVRRKQMQSGHKRELHNVKKC 178
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
VL+IAL+HP++S + +D +SED+LL T SSSPL L+ SFG + S L E++ + +
Sbjct: 179 VLQIALIHPQLSVRLLDTDSEDQLLYTVPSSSPLHLISDSFGNDVSSCLHEISTSHQSWA 238
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG-K 299
+SG+IS P + K FQY+YINSR+V K PIH +LN LAASF S + ++ K
Sbjct: 239 LSGHISGPTNVFCNKDFQYLYINSRFVSKSPIHNILNSLAASFQSSVTRTIEEVDIQSRK 298
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
R K+ PA+LLN CP S YDL F+P KT V FKDW+ +L F E+ I + W K + S
Sbjct: 299 RQKTDVYPAFLLNFFCPRSSYDLHFEPSKTIVEFKDWQSILFFFEQTITNYWKKHLPQSS 358
Query: 360 FDVDMLEDAELPLES 374
+++D +PL+S
Sbjct: 359 -KGKVIDDTCVPLKS 372
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/407 (46%), Positives = 258/407 (63%), Gaps = 46/407 (11%)
Query: 1002 RSHSAPPFHRHKRRYISLNCCSVEA---GKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNA 1058
RS SAPPF++ KR++ LN + G T + P H+ + +
Sbjct: 814 RSCSAPPFYKGKRKFPGLNQPQTKLTADGDKAIPTKDSEEREPAPENISHMSATQPI--- 870
Query: 1059 NVKPSSEEEDFRP-DFKIESSTILDLEETHKA--ENFKLSLCPHAHLGAQAEGTSIISGT 1115
P + +F +F ++ + + EET ENF + T
Sbjct: 871 ---PETCSSEFSGLNFSLKGNLKMH-EETCSGGLENFPAQI------------------T 908
Query: 1116 KWRNGHPQTTNNNI-----SCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVL 1170
KWR+ Q T + +C D+IL+ISSG LHL+ +P+SI+K C E+A+VL
Sbjct: 909 KWRDDSDQHTALELPHIPSAC----YDDILNISSGPLHLSSSSLVPESIDKKCFEEARVL 964
Query: 1171 QQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIG 1230
Q+DKKFIPV++G L ++DQHAADERIRLEELR KVLS + + + YLD+E+E+ LPE G
Sbjct: 965 LQLDKKFIPVISGEMLLLVDQHAADERIRLEELRSKVLSDDDRGITYLDSEKEMALPEAG 1024
Query: 1231 YQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1290
+QL Q +AEQI+ WGWI N + S SF KN+N+L++Q V+TL AVPCI GV+L+ DL
Sbjct: 1025 FQLFQKYAEQIQKWGWIINNPSTSSHSFKKNMNILRKQGRVVTLAAVPCILGVDLTGKDL 1084
Query: 1291 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1350
+F+QQL ++DGSS+ P +VLR+LN KACRGAIMFGD+LLPSEC+LI+EELK TSLCFQC
Sbjct: 1085 TDFIQQLDESDGSSSIPAAVLRILNYKACRGAIMFGDALLPSECSLIIEELKATSLCFQC 1144
Query: 1351 AHGRPTTVPLVNLEALHKQIAQLNNSS------ELWHGLHRGEISLK 1391
AHGRPTTVP+VN+ +L +Q+A+L + S E WHGL + E SL+
Sbjct: 1145 AHGRPTTVPIVNVASLRRQLARLGSPSGRSEAEEPWHGLSQHEASLE 1191
>gi|222642049|gb|EEE70181.1| hypothetical protein OsJ_30259 [Oryza sativa Japonica Group]
Length = 1166
Score = 346 bits (888), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 196/434 (45%), Positives = 261/434 (60%), Gaps = 40/434 (9%)
Query: 988 HNCEPNPIHKELSRRSHSAPPFHRHKRRYISLN----CCSVEAGKSNAHTLHCAKNSPEA 1043
+ C P RS SAPPF+R KR++ LN + E GK ++
Sbjct: 753 YGCSQRPRLSRGRYRSRSAPPFYRGKRKFPRLNEPLTKLTTEGGKYTTVN--------DS 804
Query: 1044 GAFKHLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLG 1103
G +Q+ + NA +P E F DF DL + K + +C
Sbjct: 805 GDITPVQEYTSHMNA-TQPIPET--FSNDFS-------DLNFSLKG---NVKMCEEKCSD 851
Query: 1104 AQAEGTSIISGTKWRNGHPQTTNNNISCDI--------HNQDNILDISSGLLHLTGEFFI 1155
+ T+ TKWR+ + + + D++L IS G LHL+ +
Sbjct: 852 ELEDSTASDEITKWRDDSDHHAVEHFVPRVSELQHGPFEHDDDVLSISYGPLHLSCSVLV 911
Query: 1156 PDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSV 1215
P+ I+K+C E+A+VL Q+DKKFIPV++G L ++DQHAADERIRLEELR KVLS +G+ +
Sbjct: 912 PECIDKNCFEEARVLLQLDKKFIPVISGEVLLLVDQHAADERIRLEELRRKVLSDDGRGI 971
Query: 1216 AYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLL 1275
YLD+E++LVLPE G+QL Q + +QI+ WGWI N T SF KN+N+L+RQ +TL
Sbjct: 972 TYLDSEEDLVLPETGFQLFQKYMQQIQSWGWIIN-STNSCESFKKNMNVLRRQSRRLTLA 1030
Query: 1276 AVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1335
AVPCI GV L+ DL++F+QQL DTDGSS PP+V+R+LN KACRGAIMFGD LLPSEC+
Sbjct: 1031 AVPCILGVTLTGKDLMDFIQQLDDTDGSSAIPPAVIRILNFKACRGAIMFGDPLLPSECS 1090
Query: 1336 LIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL----NNSSELWHGLHRGEISLK 1391
LI+EELK TSLCFQCAHGRPTTVP+VN+ +L ++A+L E WHGL SL+
Sbjct: 1091 LIIEELKATSLCFQCAHGRPTTVPIVNVASLRGELARLGAVNGRQEETWHGLSHHGPSLE 1150
Query: 1392 RASRRL--LTGVRG 1403
RA RL L +RG
Sbjct: 1151 RARTRLRELRKLRG 1164
Score = 319 bits (817), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 176/353 (49%), Positives = 226/353 (64%), Gaps = 38/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M TI RLP++V +++RS VLFDL+RVVEELV+NS+DA A+K+ + V CYVKV DDG
Sbjct: 1 MQTIKRLPKSVHSSLRSSIVLFDLSRVVEELVYNSIDANASKIDISVNARACYVKVEDDG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
GI+RD LVL+GE++A TSK H +D +FG GEALAS+SD+S++E+ TKA G
Sbjct: 61 CGITRDELVLVGEKYA-TSKF-HNVMVDGEPSSRSFGLNGEALASLSDISVVEVRTKARG 118
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
RPN Y K++KGSKC +LGID++R+ VGTTV+ R+LFYNQPVRRK MQSS K+ LH VKK
Sbjct: 119 RPNSYCKIIKGSKCSHLGIDEQREVVGTTVIVRELFYNQPVRRKQMQSSYKRELHLVKKS 178
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
VLR+AL+HP+VS + D+ESEDELL T SSSPL L+ + G S L E+ +D
Sbjct: 179 VLRVALIHPQVSLRLFDIESEDELLYTIPSSSPLPLVSNILGKNVSSCLHEIATSDKHFA 238
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
+SG+IS P D V+ N + KR
Sbjct: 239 LSGHISRPTD---------VFCNKEIDVRSK---------------------------KR 262
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
K++ PAYLLNL CP S YDL F+P +T V FKDW+ V+ F ER I W K
Sbjct: 263 QKNEVYPAYLLNLCCPRSSYDLHFEPSQTIVEFKDWQTVMYFFERTITDYWKK 315
>gi|218202592|gb|EEC85019.1| hypothetical protein OsI_32312 [Oryza sativa Indica Group]
Length = 1167
Score = 345 bits (886), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 196/434 (45%), Positives = 260/434 (59%), Gaps = 38/434 (8%)
Query: 988 HNCEPNPIHKELSRRSHSAPPFHRHKRRYISLN----CCSVEAGKSNAHTLHCAKNSPEA 1043
+ C P RS SAPPF+R KR++ LN + E GK + N
Sbjct: 752 YGCSQRPRLSRGRYRSRSAPPFYRGKRKFPRLNEPLTKLTTEGGK------YTTVNDSGD 805
Query: 1044 GAFKHLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLG 1103
+Q+ + NA +P E F DF DL + K + +C
Sbjct: 806 ADITPVQEYTSHMNA-TQPIPET--FSNDFS-------DLNFSLKG---NVKMCEEKCSD 852
Query: 1104 AQAEGTSIISGTKWRNGHPQTTNNNISCDI--------HNQDNILDISSGLLHLTGEFFI 1155
+ T+ TKWR+ + + + D++L IS G LHL+ +
Sbjct: 853 ELEDSTASDEITKWRDDSDHHAVEHFVPRVSELQHGPFEHDDDVLSISYGPLHLSCSVLV 912
Query: 1156 PDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSV 1215
P+ I+K+C E+A+VL Q+DKKFIPV++G L ++DQHAADERIRLEELR KVLS +G+ +
Sbjct: 913 PECIDKNCFEEARVLLQLDKKFIPVISGEVLLLVDQHAADERIRLEELRRKVLSDDGRGI 972
Query: 1216 AYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLL 1275
YLD+E++LVLPE G+QL Q + +QI+ WGWI N T SF KN+N+L+RQ +TL
Sbjct: 973 TYLDSEEDLVLPETGFQLFQKYMQQIQSWGWIIN-STNSCESFKKNMNVLRRQSRRLTLA 1031
Query: 1276 AVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1335
AVPCI GV L+ DL++F+QQL DTDGSS PP+V+R+LN KACRGAIMFGD LLPSEC+
Sbjct: 1032 AVPCILGVTLTGKDLMDFIQQLDDTDGSSAIPPAVIRILNFKACRGAIMFGDPLLPSECS 1091
Query: 1336 LIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL----NNSSELWHGLHRGEISLK 1391
LI+EELK TSLCFQCAHGRPTTVP+VN+ +L ++A+L E WHGL SL+
Sbjct: 1092 LIIEELKATSLCFQCAHGRPTTVPIVNVASLRGELARLGAVNGRQEETWHGLSHHGPSLE 1151
Query: 1392 RASRRL--LTGVRG 1403
RA RL L +RG
Sbjct: 1152 RARTRLRELRKLRG 1165
Score = 319 bits (817), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 176/353 (49%), Positives = 226/353 (64%), Gaps = 38/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M TI RLP++V +++RS VLFDL+RVVEELV+NS+DA A+K+ + V CYVKV DDG
Sbjct: 1 MQTIKRLPKSVHSSLRSSIVLFDLSRVVEELVYNSIDANASKIDISVNARACYVKVEDDG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
GI+RD LVL+GE++A TSK H +D +FG GEALAS+SD+S++E+ TKA G
Sbjct: 61 CGITRDELVLVGEKYA-TSKF-HNVMVDGEPSSRSFGLNGEALASLSDISVVEVRTKARG 118
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
RPN Y K++KGSKC +LGID++R+ VGTTV+ R+LFYNQPVRRK MQSS K+ LH VKK
Sbjct: 119 RPNSYCKIIKGSKCSHLGIDEQREVVGTTVIVRELFYNQPVRRKQMQSSYKRELHLVKKS 178
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
VLR+AL+HP+VS + D+ESEDELL T SSSPL L+ + G S L E+ +D
Sbjct: 179 VLRVALIHPQVSLRLFDIESEDELLYTIPSSSPLTLVSNILGKNVSSCLHEIATSDKHFA 238
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
+SG+IS P D V+ N + KR
Sbjct: 239 LSGHISRPTD---------VFCNKEIDVRSK---------------------------KR 262
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
K++ PAYLLNL CP S YDL F+P +T V FKDW+ V+ F ER I W K
Sbjct: 263 QKNEVYPAYLLNLCCPRSSYDLHFEPSQTIVEFKDWQTVMYFFERTITDYWKK 315
>gi|356540882|ref|XP_003538913.1| PREDICTED: uncharacterized protein LOC100780255 [Glycine max]
Length = 806
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 203/479 (42%), Positives = 269/479 (56%), Gaps = 105/479 (21%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATK-------VFVYVGVCNCY 53
M +I L EAVR+++RSG L D TRVVEELVFNS+DA ATK V V+V +CY
Sbjct: 1 MASIKLLSEAVRSSLRSGIFLVDFTRVVEELVFNSLDARATKGETEKLKVSVFVSTGSCY 60
Query: 54 VKVVDDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLE 113
+KVVDDGSGI RDG+ ++GER+A TSK +L D++ ++ FGFRGE LASIS+VSLLE
Sbjct: 61 LKVVDDGSGIPRDGMEMVGERYA-TSKFLNLVDLNASSE--NFGFRGEVLASISEVSLLE 117
Query: 114 IITKAHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
I+TK +GRPNGYR KG KCLYLGIDD+RK++GTTV S P+R
Sbjct: 118 IVTKTYGRPNGYR---KGCKCLYLGIDDDRKEMGTTVSSISEL-EVPIR----------- 162
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 233
EDEL CT S+SSPL+L+ S FG+E S L +
Sbjct: 163 ---------------------------EDELFCTHSASSPLSLVTSGFGVEVTSSLHNLE 195
Query: 234 ANDGALEISGYISSPYDSISVK---------------AFQYVYINSRYVCKGPIHKLLNH 278
+ +++SGYIS P +++ K A QYVY NS++VCKGP+HKL+
Sbjct: 196 VENDIIKLSGYISGPCNTVDTKILSGCPPLTFGAFLQALQYVYANSQFVCKGPVHKLMRQ 255
Query: 279 LAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEP 338
LA F+ +SW + F KR++ Q CPAYLLNL CP SLYDL F+P KT V FKDW P
Sbjct: 256 LANRFEHLNSWNTDEEFQNKKRTRCQPCPAYLLNLSCPRSLYDLAFEPSKT-VKFKDWAP 314
Query: 339 VLAFIERAIRSAWMKKIAHDSFD--VDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAK 396
+L FI +AI+ W + +A D + M+ED Q H SS
Sbjct: 315 ILNFIVKAIKQFWEENVACDPSNGATYMVED----------QHHFSS------------- 351
Query: 397 QRDHMFHKECERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPK 455
++ + + F+ E+ ++ +F Q +S +LLDGS+A+C V K
Sbjct: 352 -----IREDVDYLGVTIFK-------EKQSKGDFLLQTGYSGNLLDGSYAKCTSTVMRK 398
Score = 204 bits (518), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 146/213 (68%), Gaps = 13/213 (6%)
Query: 1042 EAGAFKHLQQSSGVCNANVKPSSEE---EDFRPDFKIESSTILDLE-----ETHKAENFK 1093
EA FK+ QQS + S+EE ++F+ + K S + D++ + E+F
Sbjct: 598 EASNFKYPQQSP----VGLHHSTEEFLLQEFKINVKRTSEVLGDMQVNDITDIDGFESFN 653
Query: 1094 L-SLCPHAHLGAQAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGE 1152
+ + P L ++ S+ GTKWRN P+ T N+ +I +Q+NILDISSG LHL G+
Sbjct: 654 IQNSAPFGELISRGVQDSLDYGTKWRNCSPKITKNDKLANIQSQNNILDISSGFLHLAGD 713
Query: 1153 FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEG 1212
IP++I+K CLEDAKVL QVDKKFI VVAG TLAVIDQHAADERIRLEEL KVLSGE
Sbjct: 714 SLIPETISKKCLEDAKVLHQVDKKFILVVAGRTLAVIDQHAADERIRLEELCQKVLSGEA 773
Query: 1213 KSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
K++ YL AEQELVLPEIGYQLL +++E+IKDWG
Sbjct: 774 KAITYLGAEQELVLPEIGYQLLHSYSEKIKDWG 806
>gi|242050106|ref|XP_002462797.1| hypothetical protein SORBIDRAFT_02g032160 [Sorghum bicolor]
gi|241926174|gb|EER99318.1| hypothetical protein SORBIDRAFT_02g032160 [Sorghum bicolor]
Length = 786
Score = 315 bits (807), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/310 (53%), Positives = 207/310 (66%), Gaps = 40/310 (12%)
Query: 1128 NISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTL- 1186
+ISC Q SSG L L IP+ ++K+C E+A+VL Q+DKKFIPV++G T+
Sbjct: 467 DISCMSSTQPVPETDSSGFLDLNFSSLIPECVDKNCFEEARVLLQLDKKFIPVISGETIL 526
Query: 1187 -----------------------------------AVIDQHAADERIRLEELRHKVLSGE 1211
A DQHAADERIRLE+LR KVLS E
Sbjct: 527 LVDQGFDNIVTDSSILSIPVIFVGIIMLWKYYLVPAAFDQHAADERIRLEDLRSKVLSEE 586
Query: 1212 GKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV 1271
G V+YLD+E+EL LPE G+QL Q +AEQI+ WGWI + + S SF KN+N+L+RQ+ +
Sbjct: 587 GHGVSYLDSEEELSLPETGFQLFQKYAEQIQKWGWIISSGSNSSESFKKNMNVLKRQVRL 646
Query: 1272 ITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLP 1331
+TL+AVPCI GV L+ DL+EF+ QL +TDGSS PP+VLR+LN KACRGAIMFGDSLLP
Sbjct: 647 VTLVAVPCILGVKLTGKDLMEFIWQLDETDGSSDIPPAVLRILNFKACRGAIMFGDSLLP 706
Query: 1332 SECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLNNSS----ELWHGLHRGE 1387
SEC LI+EELK TSLCFQCAHGRPTT P++N+ ALH+++A+L S E WHGL E
Sbjct: 707 SECCLIIEELKATSLCFQCAHGRPTTAPILNVTALHEELARLQTLSGTQAETWHGLGHHE 766
Query: 1388 ISLKRASRRL 1397
SL+RA RL
Sbjct: 767 PSLERAQMRL 776
>gi|357154509|ref|XP_003576807.1| PREDICTED: uncharacterized protein LOC100827102 [Brachypodium
distachyon]
Length = 1001
Score = 310 bits (795), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/325 (50%), Positives = 220/325 (67%), Gaps = 14/325 (4%)
Query: 1083 LEET--HKAENFKLSLCPHAHLGAQAE----GTSIISGTKWRNGHPQTTN---NNISCDI 1133
+E+T H + F L+ PH+H A+ + G S S W + + +IS
Sbjct: 662 IEDTYFHFSHPFSLADTPHSHSHARTDLELHGESNKSFAYWSSENIDNATPAPEDISQMS 721
Query: 1134 HNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHA 1193
Q SS L +P+ I+K C E+A+VL Q+DKKFIPV++G L ++DQHA
Sbjct: 722 ATQPIPETSSSDFSALNLSSLVPEYIDKKCFEEARVLFQLDKKFIPVISGEMLLLVDQHA 781
Query: 1194 ADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQ 1253
ADERIRLEELR KVLS E + + YLD+E+++ LPE G+QL Q ++EQI+ WGWI N +
Sbjct: 782 ADERIRLEELRGKVLSDEDRGITYLDSEEDMALPETGFQLFQKYSEQIQKWGWIINGSSS 841
Query: 1254 GSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV 1313
S+SF KN+N+L+RQ ++ L AVPCI GV+L+ DL++F+QQL ++DGSST PP+VLR+
Sbjct: 842 SSQSFKKNMNILRRQARLVALTAVPCILGVDLTGKDLMDFIQQLDESDGSSTIPPAVLRI 901
Query: 1314 LNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1373
LN KACRGAIMFGD LLPSEC LI+EELK TSLCFQCAHGRPTTVP+VN+ +L ++A+L
Sbjct: 902 LNFKACRGAIMFGDPLLPSECCLIIEELKATSLCFQCAHGRPTTVPIVNVASLRDELARL 961
Query: 1374 N-----NSSELWHGLHRGEISLKRA 1393
+ +E WHGL L+RA
Sbjct: 962 GTLNGRSQTEPWHGLSHHGPCLERA 986
Score = 303 bits (776), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 174/374 (46%), Positives = 233/374 (62%), Gaps = 45/374 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M TI RLP++V +++RS VL DL RVVEEL++NS+DA A K+ + + V +CYVKV DDG
Sbjct: 12 MQTIKRLPKSVHSSLRSSIVLSDLLRVVEELIYNSIDANAKKIDISLNVRSCYVKVEDDG 71
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
GI+RD LVLLGE++A + + D + A+ +FG GEALAS+SD+S++E+ TK+ G
Sbjct: 72 CGITRDELVLLGEKYATSKFHDSMGDGESASR--SFGLNGEALASLSDISVVEVRTKSRG 129
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
RPN Y K++KGSKC +LGIDD+R+ VGTTVV R+LFYNQPVRRK MQSS K+ L +VKKC
Sbjct: 130 RPNSYCKIIKGSKCSHLGIDDQREAVGTTVVVRELFYNQPVRRKQMQSSHKRELQNVKKC 189
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
VLR+AL+HP++SF+ +D++SEDELLCT SSS L L+ +SFG + S L E++ +D
Sbjct: 190 VLRVALIHPQISFRLLDIDSEDELLCTVPSSSSLPLISNSFGNDVSSCLHEISTSDQNWA 249
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
+SG+IS P D S K+ + N N KR
Sbjct: 250 LSGHISGPTDVFSNKS-SMIRTN---------------------------GENDVQSRKR 281
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFK---------------DWEPVLAFIER 345
K+ PAYLLN CP S YDL ++P KT V FK DW+ +L E
Sbjct: 282 QKTDVYPAYLLNFFCPRSSYDLYYEPSKTVVEFKLLRFFIFPSSFLTIQDWQSILFIFED 341
Query: 346 AIRSAWMKKIAHDS 359
I + W K + S
Sbjct: 342 TIINYWKKHVPQPS 355
>gi|50726320|dbj|BAD33895.1| DNA mismatch repair protein -like [Oryza sativa Japonica Group]
Length = 1249
Score = 303 bits (777), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 221/353 (62%), Gaps = 44/353 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
+ TI RLP++V +++RS VLFDL+RVVEEL+ SV+A A CYVKV DDG
Sbjct: 108 INTIKRLPKSVHSSLRSSIVLFDLSRVVEELIDISVNARA-----------CYVKVEDDG 156
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
GI+RD LVL+GE++A TSK H +D +FG GEALAS+SD+S++E+ TKA G
Sbjct: 157 CGITRDELVLVGEKYA-TSKF-HNVMVDGEPSSRSFGLNGEALASLSDISVVEVRTKARG 214
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
RPN Y K++KGSKC +LGID++R+ VGTTV+ R+LFYNQPVRRK MQSS K+ LH VKK
Sbjct: 215 RPNSYCKIIKGSKCSHLGIDEQREVVGTTVIVRELFYNQPVRRKQMQSSYKRELHLVKKS 274
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
VLR+AL+HP+VS + D+ESEDELL T SSSPL L+ + G S L E+ +D
Sbjct: 275 VLRVALIHPQVSLRLFDIESEDELLYTIPSSSPLPLVSNILGKNVSSCLHEIATSDKHFA 334
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
+SG+IS P D K FQ I+ R KR
Sbjct: 335 LSGHISRPTDVFCNKDFQNEEIDVR-------------------------------SKKR 363
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
K++ PAYLLNL CP S YDL F+P +T V FKDW+ V+ F ER I W K
Sbjct: 364 QKNEVYPAYLLNLCCPRSSYDLHFEPSQTIVEFKDWQTVMYFFERTITDYWKK 416
Score = 295 bits (755), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/433 (41%), Positives = 246/433 (56%), Gaps = 56/433 (12%)
Query: 988 HNCEPNPIHKELSRRSHSAPPFHRHKRRYISLN----CCSVEAGKSNAHTLHCAKNSPEA 1043
+ C P RS SAPPF+R KR++ LN + E GK ++
Sbjct: 854 YGCSQRPRLSRGRYRSRSAPPFYRGKRKFPRLNEPLTKLTTEGGKYTTVN--------DS 905
Query: 1044 GAFKHLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLG 1103
G +Q+ + NA +P E F DF DL + K + +C
Sbjct: 906 GDITPVQEYTSHMNA-TQPIPET--FSNDFS-------DLNFSLKG---NVKMCEEKCSD 952
Query: 1104 AQAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSC 1163
+ T+ TKWR+ D H ++ + L+ +P+ I+K+C
Sbjct: 953 ELEDSTASDEITKWRD----------DSDHHAVEHFVPRVISLV------LVPECIDKNC 996
Query: 1164 LEDAKVLQQVDKKFIPVVAGGTLAVIDQ-------HAADERIRLEELRHKVLSGEGKSVA 1216
E+A+VL Q+DKKFIPV++G L ++DQ H E + + + KVLS +G+ +
Sbjct: 997 FEEARVLLQLDKKFIPVISGEVLLLVDQEEFIFYVHILYEVVSVY-MVTKVLSDDGRGIT 1055
Query: 1217 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
YLD+E++LVLPE G+QL Q + +QI+ WGWI N T SF KN+N+L+RQ +TL A
Sbjct: 1056 YLDSEEDLVLPETGFQLFQKYMQQIQSWGWIIN-STNSCESFKKNMNVLRRQSRRLTLAA 1114
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1336
VPCI GV L+ DL++F+QQL DTDGSS PP+V+R+LN KACRGAIMFGD LLPSEC+L
Sbjct: 1115 VPCILGVTLTGKDLMDFIQQLDDTDGSSAIPPAVIRILNFKACRGAIMFGDPLLPSECSL 1174
Query: 1337 IVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL----NNSSELWHGLHRGEISLKR 1392
I+EELK TSLCFQCAHGRPTTVP+VN+ +L ++A+L E WHGL SL+R
Sbjct: 1175 IIEELKATSLCFQCAHGRPTTVPIVNVASLRGELARLGAVNGRQEETWHGLSHHGPSLER 1234
Query: 1393 ASRRL--LTGVRG 1403
A RL L +RG
Sbjct: 1235 ARTRLRELRKLRG 1247
>gi|414590137|tpg|DAA40708.1| TPA: hypothetical protein ZEAMMB73_047996 [Zea mays]
Length = 1132
Score = 293 bits (751), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 173/396 (43%), Positives = 240/396 (60%), Gaps = 39/396 (9%)
Query: 1002 RSHSAPPFHRHKRRYISLNCCSVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVK 1061
RSHSAPPF+R K ++ LN + +++ C N+PE A + C ++ +
Sbjct: 758 RSHSAPPFYRGKLKFSRLNV-PLSKPSTDSDKDICV-NNPEDNAPGPVDIP---CISSTQ 812
Query: 1062 PSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSIISGTKWRNGH 1121
P E +SS DL K + +L++ P + ++ ++ +
Sbjct: 813 PIPE---------TDSSEFPDLNFRGKLKFSRLNV-PLSKPSTDSDKDICVNNPEDNAPG 862
Query: 1122 PQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV 1181
P +I C Q SS L IP+ ++K+C E+A+VL Q+DKKFIPV+
Sbjct: 863 PV----DIPCISSTQPIPETDSSEFPDLNFSSLIPECVDKNCFEEARVLLQLDKKFIPVI 918
Query: 1182 AGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQI 1241
+G T+ ++DQ VLS EG V+YLD+E+EL LPE G+QL Q +AEQI
Sbjct: 919 SGETILLVDQ---------------VLS-EGHGVSYLDSEEELSLPETGFQLFQKYAEQI 962
Query: 1242 KDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTD 1301
+ WGWI + + S SF KN+N+L+RQ+ ++TL+AVPCIFGV L+ DL+EF+ QL +TD
Sbjct: 963 QKWGWIISGGSNSSESFKKNMNILKRQVRLVTLVAVPCIFGVKLTGKDLMEFIWQLDETD 1022
Query: 1302 GSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV 1361
GSS PP+VLR+LN KACRGAIMFGD LLPSEC LI+EELK TSLCFQCAHGRPTTVP++
Sbjct: 1023 GSSDMPPAVLRILNFKACRGAIMFGDPLLPSECCLIIEELKATSLCFQCAHGRPTTVPIL 1082
Query: 1362 NLEALHKQIAQLN----NSSELWHGLHRGEISLKRA 1393
N+ +LH ++A+L +E WHGL E SL+RA
Sbjct: 1083 NIASLHDELARLQMLSGRKAETWHGLGHHEPSLERA 1118
Score = 194 bits (493), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 172/353 (48%), Gaps = 96/353 (27%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M TI RLP++V +++RSG +L DL RV+EEL++NS+DA A+K+ + V + CYVKV
Sbjct: 61 MQTIKRLPKSVHSSLRSGVILSDLPRVIEELIYNSIDANASKIDIAVNIRACYVKV---- 116
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
DD GI R E L+ + K +G
Sbjct: 117 --------------------------EDDGCGIT----RDE---------LVLLGEKYNG 137
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
P K D + +V R+LFYNQPVRRK MQSS K+ LH VKKC
Sbjct: 138 SPAISVKT------------DYVISLFVFLVVRELFYNQPVRRKQMQSSEKRELHHVKKC 185
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
VL+IAL+HP++S + +D +SEDELL T SSSPL L+ +FG + L E+ A+D
Sbjct: 186 VLQIALIHPQISLRLLDNDSEDELLYTEISSSPLPLISKTFGDDISRCLHEITASDQVWT 245
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
+SG+IS P D K+ KR
Sbjct: 246 LSGHISGPADVFCTKS-----------------------------------------RKR 264
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
K+ PA++LN CP S YDL F+P KT V FKDW VL F E+++ + W K
Sbjct: 265 QKADIYPAFILNFYCPRSTYDLHFEPTKTIVEFKDWRTVLLFFEQSVTNYWKK 317
>gi|449529950|ref|XP_004171960.1| PREDICTED: uncharacterized LOC101213777 [Cucumis sativus]
Length = 527
Score = 200 bits (509), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 206/416 (49%), Gaps = 62/416 (14%)
Query: 898 DTEENYKFDYDSKLRRSNQE--KCTTARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREH 955
D E+ +FDYD L SN++ K + S + + ++ ED +L++ CN F EH
Sbjct: 86 DDEKGCQFDYDIMLSSSNKKNYKSSCNDSTMIIDDVFDTREDLSTFLKK---CNNF--EH 140
Query: 956 SDVPFDKTDWLCSVLSSIEYDNPETQRYKFRNHNCEPNPIHK---------ELSRRSHSA 1006
S P D L + PE K + EP H+ E RR SA
Sbjct: 141 SS-PRSSPDMLSRQKYFSNWRLPERDCEKAYG-SSEPEFGHQAFKQKYCSVERPRRGKSA 198
Query: 1007 PPFHRHKRRYISLNCCSVE--------------AGKSNAHTLHCAK-------------N 1039
PPF++ K + L+ E A KS+A + +C +
Sbjct: 199 PPFYKRKTSFYCLDQRKAERADAASFYCLNKRKADKSSASSFYCMDQGKVEKLKASVFLD 258
Query: 1040 SP---EAGAFKHLQQSSGVCNANVKPSS------EEEDFRPDFKIESSTILDLEETH--- 1087
SP E + + SG N VKP E R D S+ + + EE
Sbjct: 259 SPPHLEPVELRDSEHISGTSNQYVKPFPVDDLLVETRSSRRDTTKMSAIMGNSEEKQGEI 318
Query: 1088 -KAENFKLSLCPHAHLGA----QAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDI 1142
K + + + A + Q + + + + N S ++ +ILDI
Sbjct: 319 SKQSQYDVKVTESAIVLTLFHFQNYAQRKLKSPQIYGSNGKIARNEDSHAFDDEVSILDI 378
Query: 1143 SSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE 1202
SSG L L +PDSI+K+ LEDAKVL Q+DKKFIPVV+GG LAVIDQHAADERIRLE+
Sbjct: 379 SSGFLSLASNSLVPDSIDKNFLEDAKVLLQLDKKFIPVVSGGILAVIDQHAADERIRLED 438
Query: 1203 LRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSF 1258
LR K+LSGE K+ A LDAE ELVLPEIGYQLL N+A+Q+K+WGWICNIH Q S+SF
Sbjct: 439 LRQKLLSGEAKTTASLDAEHELVLPEIGYQLLYNYADQVKEWGWICNIHAQDSKSF 494
>gi|390352990|ref|XP_780519.3| PREDICTED: uncharacterized protein LOC575007 [Strongylocentrotus
purpuratus]
Length = 1638
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 198/368 (53%), Gaps = 29/368 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
+ I L + V+N +RSG + + VEELV NS+DAGA+ + V V + +C V+VVD+G
Sbjct: 7 LAPIQYLSQDVKNQLRSGIATPSVVQCVEELVVNSIDAGASCIAVRVDLPDCKVQVVDNG 66
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAH 119
GI++D ++ +GER+ ATSK D+++ I +G+RGEALASI ++ S+LEI ++A
Sbjct: 67 RGITKDDMLYVGERY-ATSKCHDTKDLEN---ISHYGYRGEALASIKEISSVLEISSRAR 122
Query: 120 GRPNGYRKVMKGSKCLYLGIDDE---RKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G Y K+ + K GI R GTTV + ++FYN PVRRK + S V
Sbjct: 123 GSEVTYSKLYRHGK--DQGISKHSKVRPSGGTTVAAHNVFYNLPVRRKVLCS--PLVYEQ 178
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ K + I+L+HP++S + + + + T +SSS + FG + L EVN
Sbjct: 179 ICKRLQAISLIHPQISLTLRNDSTGVKSIQTHNSSSIVQTFGYLFGKDVADCLKEVNHIR 238
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+SG+I S S K+ Q+VY+N R V K IHKL+N L ++ + S N
Sbjct: 239 TIFNVSGFIGST--SFRNKSLQFVYVNGRLVLKTKIHKLINELLSNSLVTKSKGKNQDTA 296
Query: 297 KGKRSKSQACPA---------------YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLA 341
G KS A + ++LN+ CP S YD+T DP KT + F+DWE +
Sbjct: 297 LGYTMKSNAASSTCQPSPGGNQVEYGIFVLNITCPRSEYDITLDPSKTLIEFRDWEGAVT 356
Query: 342 FIERAIRS 349
+ + S
Sbjct: 357 CVHELVTS 364
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 120/271 (44%), Gaps = 49/271 (18%)
Query: 1141 DISSGLLHLTGEF--FIPDSIN-----KSCLEDAKVLQQVDKKFI-----------PVVA 1182
++S GL + +F + S+N K+ KVL QVD KFI P
Sbjct: 1358 NVSEGLSSVDAKFQAMVLSSLNPCQFTKAMFNSIKVLGQVDTKFIACLVNSDYDKNPAGE 1417
Query: 1183 GGTLAVIDQHAADERIRLEELRHKVLS--------GEGKSVAYLDAEQELVLPEIGY--- 1231
L ++DQHAA ERIRLE L + K+ +E L IG
Sbjct: 1418 SNLLILVDQHAAHERIRLEMLIQDAYTPRVDTDDIDNDKTRCIRTSEVTPAL-RIGLSPS 1476
Query: 1232 --QLLQNFAEQIKDWGWICNIHTQGSRS-------FNKNLNLLQRQITVITLLAVPCIFG 1282
+LL+ ++ ++K G + + K N L+R I
Sbjct: 1477 ELRLLEAYSPKMKRIGIEYTLSGDSAMVTHLPACFVEKEANELKRGRQTI---------A 1527
Query: 1283 VNLSDVDLLEFLQQLADTDGS-STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEEL 1341
++++ + E L + G+ S+ P ++ R+LNS+AC GAI FGD+L EC ++ +L
Sbjct: 1528 TSMAETLIKEVLDSIQHQSGAVSSLPKTITRILNSQACHGAIKFGDTLDRDECKTLIGQL 1587
Query: 1342 KQTSLCFQCAHGRPTTVPLVNLEALHKQIAQ 1372
L FQCAHGRP +P+ + + + +++
Sbjct: 1588 SSCDLPFQCAHGRPALMPIFDFKKIKHGVSE 1618
>gi|291221411|ref|XP_002730726.1| PREDICTED: MutL protein homolog 1-like [Saccoglossus kowalevskii]
Length = 1476
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 194/351 (55%), Gaps = 17/351 (4%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDG 60
TI L + VR+ +RSG + LT+ VEELV NS+DA AT + V V + CY V V+D+G
Sbjct: 9 STIQPLSDEVRSRLRSGIAITSLTQCVEELVLNSIDANATCIAVRVDI-PCYKVHVIDNG 67
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAH 119
+GI+ + + L+G+R+ ATSK ++ D+++ + +GFRGEALASI DV+ +LEI++KA
Sbjct: 68 TGITVEQMKLIGQRY-ATSKCHNIQDLEN---LSYYGFRGEALASICDVTGVLEIVSKAK 123
Query: 120 GRPNGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
Y K+ K K L + R GTT+ D FYN PVRRK M SP V+
Sbjct: 124 SSNCTYCKLFKNGKPLEVFKAEKPRPSQGTTITVHDFFYNLPVRRKTM--SPVLEFERVR 181
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+C+ IAL+ P VS + + + L T S S L FG+ + E+ +
Sbjct: 182 QCLEGIALMRPFVSLSLRNDYTGVKTLQTHKSDSILGTFGQLFGVGKARIMKEMQYSYNE 241
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF--L 296
I G+I + D + K Q++Y+N R + K +HK++N L + S K+ G +
Sbjct: 242 FTIIGHIGT--DGHTNKNIQFIYVNGRLLLKTKLHKVVNVLLSK---SVIVKSRTGMCEI 296
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
S P ++LN++CP S YD+ +P KT V FKDW+ +L +E I
Sbjct: 297 PSPSRGSDLHPMFVLNIQCPLSEYDICLEPSKTLVEFKDWDGILLCLENFI 347
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 126/253 (49%), Gaps = 40/253 (15%)
Query: 1161 KSCLEDAKVLQQVDKKFIPVVAGGT--------LAVIDQHAADERIRLEELRHKV----- 1207
K+ L++ K+ QVD KFI + T L +IDQHAA ER+RLE+L V
Sbjct: 1225 KAMLDNIKMCGQVDDKFIACLVKTTDKTDEPNLLVLIDQHAAHERVRLEQLTADVYDDSK 1284
Query: 1208 -----LSGEGKSVAYLDAEQELVLP-EIGYQLLQNFAEQIKDWGW--------ICNIHTQ 1253
+S + +S + A ++ P EI ++++ F I+ G I IHT
Sbjct: 1285 DDEDPISRKIRSSRVIPAVTIILTPGEI--RIMEAFKSNIEKLGVTFNITGSDIIEIHTL 1342
Query: 1254 GSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGS-STTPPSVLR 1312
+ + +N ++R + L V + L E + L T G+ + P ++ +
Sbjct: 1343 PACLMEREVNEVKRGRQPVALSIVETL---------LKEHIDLLQKTSGACAVLPRTLTK 1393
Query: 1313 VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQI-A 1371
VLNS+AC GAI FGD+L EC ++ L L FQCAHGRP+ +P+++L+ L KQ+
Sbjct: 1394 VLNSQACHGAIKFGDALDHHECTSLIRSLSHCDLPFQCAHGRPSLMPIIDLDILRKQLDT 1453
Query: 1372 QLNNSSELWHGLH 1384
+ + +LW H
Sbjct: 1454 EKCSKPKLWKLKH 1466
>gi|168000047|ref|XP_001752728.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696259|gb|EDQ82599.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1067
Score = 189 bits (480), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 141/367 (38%), Positives = 197/367 (53%), Gaps = 44/367 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
MG I RL AV + +RS TV+ + VEEL+ NS+DAGAT+V V VKV DDG
Sbjct: 1 MGRIGRLSAAVVSHLRSNTVVSSFEQAVEELICNSLDAGATQVRVQFDGGGASVKVEDDG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
G+SR+ L L+G RH ATSKL L ++ A G+ T GFRGEAL+S+SD+S+LEI ++ G
Sbjct: 61 HGMSREDLELVGLRH-ATSKLHTLDEL--AAGVQTLGFRGEALSSLSDLSILEITSRVQG 117
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQS------------ 168
P+ Y K+MK S + G+ + T+ RD+FYNQPVRR+ S
Sbjct: 118 CPHTYCKIMKAS---FPGL----YRLHCTITLRDMFYNQPVRRRLFHSSQNAAFTFAVNL 170
Query: 169 ----SPKKVLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIE 224
S +K+L SVK+ ++R+AL + V+F D +E L +S + L FG E
Sbjct: 171 PWCCSSRKILQSVKERIVRLALAYFNVTFILTDSLRVEEELHIRRHTSLYSTLQDVFGRE 230
Query: 225 DFSFLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFD 284
L E++ G L ++G++SS S+K F P H LLN + +
Sbjct: 231 FCHGLKEIDFAKGKLRLTGFLSSTETYTSLKVF-----------TDPSH-LLNATPSGGE 278
Query: 285 CSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIE 344
K + K A PA++LNL C S YD+TF+ KT+V FKDW P L F+E
Sbjct: 279 PKRIEKLDTSLGKA------AYPAFVLNLSCELSEYDITFEATKTYVEFKDWTPALTFLE 332
Query: 345 RAIRSAW 351
+ +W
Sbjct: 333 NVLCVSW 339
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/316 (37%), Positives = 160/316 (50%), Gaps = 65/316 (20%)
Query: 1131 CDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVID 1190
C N ++IL +S+ L + PD + K L+ A+VLQQVD KFI +VA L ++D
Sbjct: 767 CMRANTNDILHVSAVTLKSWSKSLQPDMVTKKSLQHARVLQQVDNKFIAIVAQNVLLLVD 826
Query: 1191 QHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGW-ICN 1249
Q A +G+ + LD + +L L Q L + +QI+DWGW C
Sbjct: 827 QVLA--------------AGKQQCSTLLDVKHDLSLGLGEQQTLHAYRQQIEDWGWRFCT 872
Query: 1250 IHTQGSRSFNK-NLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPP 1308
+RS ++ ++ + L AVPCI GVNL+ DL E+LQQL T G+S PP
Sbjct: 873 --ASDARSLDRTSIRGCDSTTCKLQLSAVPCILGVNLTASDLEEYLQQLGATQGASVPPP 930
Query: 1309 SVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF-------------------- 1348
+V+R+LN K+CRGAIMFGD LLP++C +V LK TSLCF
Sbjct: 931 AVIRLLNYKSCRGAIMFGDPLLPAQCRQLVSHLKHTSLCFQDYASSLAAFSSKATPMLCL 990
Query: 1349 ----------QCAHGRPTTVPLVNLEALHKQI-AQLNN----------------SSELWH 1381
QCAHGRPT VPLVNL+ L ++ +Q+ N S WH
Sbjct: 991 INDFCLFVTLQCAHGRPTMVPLVNLQILRQRTESQMTNDGFITTNTSRGNIPTASGACWH 1050
Query: 1382 GLHRGEISLKRASRRL 1397
L + +SL+RA RL
Sbjct: 1051 KLMKHPLSLERARERL 1066
>gi|327259325|ref|XP_003214488.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Anolis
carolinensis]
Length = 1404
Score = 187 bits (475), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/359 (35%), Positives = 197/359 (54%), Gaps = 21/359 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LPE V+ T+RSG + L + EELVFNS+DA AT V V V + V+VVD+G G+
Sbjct: 2 IKCLPEEVQATLRSGVAISSLGQCAEELVFNSIDAKATCVAVRVDLETFKVQVVDNGCGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
R+ + +G R+ TSK G L D+++ + +GFRGEALASI+++ S+LEI +K
Sbjct: 62 GREDISKIGNRY-FTSKCGSLEDLEN---LRFYGFRGEALASIANIASILEISSKTRKTA 117
Query: 123 NGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ K L + + R GTTV +LFYN PVRRK M SS + L ++ +
Sbjct: 118 TSFLKMFHNGKGLEVSETEMNRPCAGTTVTVYNLFYNLPVRRKCMNSSLE--LERMRHKI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
I+L+HP VSF + + +L + + + + L EV G EI
Sbjct: 176 EAISLIHPSVSFSLRNDTACSMVLQLSKTKDLCSRFSQIYSLSKSQKLREVKYKSGGFEI 235
Query: 242 SGYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
G+IS+ Y+ K Q++Y+N+R + K +HKL++ L S K NG L+
Sbjct: 236 YGFISTEGHYN----KNIQFLYVNNRLILKTRLHKLIDFLLRKQ--STICKTKNGSLQSS 289
Query: 300 ----RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
RS S+A +++N++C + YD+ +P KT + F++W +L +E I+ A++K+
Sbjct: 290 PARHRSGSEAYGVFVINVKCQYDEYDVCLEPAKTLIEFRNWAALLTCVEEGIK-AFLKQ 347
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 127/269 (47%), Gaps = 54/269 (20%)
Query: 1153 FFIPDSINKSCLEDAKVLQQVDKKFIP-----------VVAGGTLAVIDQHAADERIRLE 1201
P K+ ++ +VL QVD KFI V+ G L ++DQHAA ER+RLE
Sbjct: 1139 IMYPYRFTKNMIDSMQVLNQVDNKFIACLINTDENEEAVLHGNLLVLVDQHAAHERVRLE 1198
Query: 1202 EL------RHKVLSGEGKSVA-YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1254
+L + SG K +A + E+ + E +LL+ + ++D G
Sbjct: 1199 QLITDSYEKQSETSGRKKLLASTVCPPLEIEITEDHRRLLRCCHKGLEDLGL-------- 1250
Query: 1255 SRSFNKNLNLLQRQITVITLLAVPCIF----------GVNLSDVDLL-EFLQQLAD---T 1300
L + Q + I + VP F G +++ EF+Q+ A+ T
Sbjct: 1251 ------ELFFPENQPSQILVGKVPLCFVEREANELRRGRQTVAKNIVQEFIQEQAELLQT 1304
Query: 1301 DGSS--TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1358
G + T P +VL+VL S+AC GAI F D+L +C ++E L L FQCAHGRP+ +
Sbjct: 1305 TGGAQGTLPLTVLKVLASQACHGAIKFNDNLTFEDCCRLMESLSCCQLPFQCAHGRPSML 1364
Query: 1359 PLVNLEALHKQ------IAQLNNSSELWH 1381
PL +++ LH++ +A+L + W
Sbjct: 1365 PLADVDHLHQESQPKPNLAKLRRMVKAWQ 1393
>gi|303278460|ref|XP_003058523.1| DNA mismatch repair enzyme [Micromonas pusilla CCMP1545]
gi|226459683|gb|EEH56978.1| DNA mismatch repair enzyme [Micromonas pusilla CCMP1545]
Length = 736
Score = 183 bits (465), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 189/354 (53%), Gaps = 15/354 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSG 62
+ +L +++ +RS TV+ + ++VEE V NS+DAGATKV V V + + V D+G G
Sbjct: 24 LRQLSPELQSKLRSCTVISSIGQLVEECVCNSIDAGATKVSVVVDTGSTLAITVSDNGRG 83
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + +G R+ TSK L D+ D I T GFRGEALAS+SD+S+LE+ ++A G
Sbjct: 84 MSVRDVRDVGRRYH-TSKCHDLQDLSD--NIKTLGFRGEALASMSDLSVLEVTSRAAGSF 140
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
Y ++ + L R + GT + +RDLF+N PVRR ++ + +K L +
Sbjct: 141 ETYTRISTKAGTATLACGPARYQLPKAGTVITARDLFHNHPVRRNMIRRNLQKQLEDARA 200
Query: 180 CVLRIALVHPKVSFKFIDMESE-DELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
V R+AL+HP V + EL+ S L+ L +FG S L V G
Sbjct: 201 RVYRLALIHPAVGVSLTEFNGRRKELMRLPPGRSLLSALSDAFGSALASSLVPVGLTVGP 260
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCS-DSWKANNGFLK 297
GY++ +++ Q++Y+N R+V K P+HK + +F+ + D +++ G +
Sbjct: 261 FRARGYVTPSNRALNSPEVQFLYVNRRFVKKTPLHKAVKD---AFNAARDPYESRRGPVT 317
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+ P Y+L L C S YD+T+D KT + F+DWE L + A+R AW
Sbjct: 318 ---APPGGHPGYVLCLDCSPSEYDVTYDVEKTLIEFRDWEMPLRVLNEALREAW 368
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPV-VAGGTLAVIDQHAADERIRLEELRHKVLS-GEGKSVA 1216
+ + LE+A VL Q KKF+ + A G L +DQHA+DER+RLE LR + + G+ +
Sbjct: 494 VTRESLENATVLTQWGKKFVLIRSASGDLFALDQHASDERVRLENLRRDLTARGDAVTSK 553
Query: 1217 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
L L L+ A WGW G ++L
Sbjct: 554 VLPHPVPCELSAAELATLRANASSAHRWGWRWEDDDAGGGG--------------VSLTG 599
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1336
P I G L L E+L+++A +S PP++ R+L SKACRGAIMFGD L EC
Sbjct: 600 TPAIEGTTLGGDALGEYLREIAAVGLTSAPPPALHRLLASKACRGAIMFGDMLRRRECVA 659
Query: 1337 IVEELKQTSLCFQCAHGRPTTVPLV 1361
++EEL++T L QCAHGRPT L
Sbjct: 660 LLEELRKTQLPLQCAHGRPTAALLA 684
>gi|340382915|ref|XP_003389963.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Amphimedon
queenslandica]
Length = 913
Score = 179 bits (455), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 194/360 (53%), Gaps = 26/360 (7%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRD 66
L E++R+ +RSG L L + VEELV NS+DAGAT++ V+V + + +KV D+G GI ++
Sbjct: 10 LSESLRSQIRSGLSLSSLVQCVEELVLNSIDAGATQITVHVDISHLLIKVFDNGVGIGKE 69
Query: 67 GLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPNGY 125
++++GER+ ATSK L D++D + ++G+RGEALAS+ + ++I ++ P Y
Sbjct: 70 DMMIIGERY-ATSKCHSLKDLED---LRSYGYRGEALASLIKICGKVDITSRQRLSPLTY 125
Query: 126 RKVMKGSKCLYL--GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 183
K L + GTTV D+F + PVRRK + S P + L +++ +
Sbjct: 126 TKSFHSGVAFPLKESLSSLHHKTGTTVALSDIFQSLPVRRKSL-SEPVE-LERIRRSLSA 183
Query: 184 IALVHPKVSFKFID--MESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
IAL+H VSF D + LL T + L+ FG E L EV+ + +
Sbjct: 184 IALIHSSVSFSLHDGSFGNGRLLLQTKGTGGMLSAFSFLFGKEIAQSLREVSRIEAGYTV 243
Query: 242 SGYIS-SPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL-----------AASFDCSDSW 289
SGYIS SP+ S K+ Q +YIN R VCK +H +N L +A ++ S S
Sbjct: 244 SGYISTSPHHS---KSIQMIYINKRLVCKTRLHSHVNKLLDNSLIAHCKDSAQYNRSQSK 300
Query: 290 KANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
G + K S+ Y+LN++C + D+ DP K+ V FK W+ VL+ + A+RS
Sbjct: 301 TRVGGDMSPKAVYSERFGVYVLNIQCSKTEVDIFMDPDKSLVEFKKWDKVLSVLSLAVRS 360
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 110/217 (50%), Gaps = 12/217 (5%)
Query: 1164 LEDAKVLQQVDKKFIPV------VAGGTLAVIDQHAADERIRLEELR---HKVLSGEGKS 1214
L+ KVL Q+D KFI + L + DQHAADER+RLE L + + +G KS
Sbjct: 676 LKHVKVLGQIDNKFIACTLKTEELKDDLLVLFDQHAADERVRLEALTEGIYDLATGNIKS 735
Query: 1215 VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITL 1274
V +D L L E+ +L +A ++K+ G + + L + + +
Sbjct: 736 V-RIDPSLTLKLNELDRRLALTYARELKNIGNRVKVSCKHEMLLVSELPAILTERDIGEK 794
Query: 1275 LAVPCIFGVNLSDVDL--LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPS 1332
+ + L ++L L+ + + G + P S+ +VL S AC GAI FGDSL
Sbjct: 795 QKIKLAQDLILKHLELFCLKTVSEKVRGGGGAMLPISLHKVLCSLACHGAIKFGDSLTVE 854
Query: 1333 ECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQ 1369
+C+ ++ L + L FQCAHGRP+ +P+VNL L K+
Sbjct: 855 QCSELIASLSKCKLPFQCAHGRPSLMPIVNLSLLEKR 891
>gi|156400212|ref|XP_001638894.1| predicted protein [Nematostella vectensis]
gi|156226018|gb|EDO46831.1| predicted protein [Nematostella vectensis]
Length = 337
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 193/345 (55%), Gaps = 17/345 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L +R+ +RSG + LT+ ++ELV N++DAGA+ + V+V + + V+V D+GSGI
Sbjct: 2 IRHLDTGIRSHLRSGVAISTLTQAIDELVTNALDAGASCINVHVDIPSFRVQVSDNGSGI 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
++D L +LG+R+ TSK L+D+ + ++GFRGEALASI D+ +LEI+TK
Sbjct: 62 TKDNLEILGQRY-CTSKCHSLSDLRK---LSSYGFRGEALASIRDICGVLEIVTKHSSSY 117
Query: 123 NGYRKVMKGSKCLYLGID-DERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
Y K+ + K L + R + GTTV D+F N PVRRK + S V++ +
Sbjct: 118 KTYCKLFRSGKPLTVTQSCFPRSNTGTTVTIHDIFSNLPVRRKLLSSVLD--FERVRQRL 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
L IAL+HP+VSF + + + L T S + FG L +V + ++
Sbjct: 176 LSIALIHPEVSFILFNDATFQKCLQTRKCLSVTSTFSQLFGNLKARSLKDVFSEHKHFKV 235
Query: 242 SGYIS-SPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASF--DCSDSWKANNGFL 296
SG+I P+ + K Q+VYINSR + K IHKLLN + +SF + N+ +
Sbjct: 236 SGHIGIEPHHN---KNLQFVYINSRLLLKTKIHKLLNSMLSKSSFIKQLPSNMSENDVPM 292
Query: 297 KGKRSKSQACPA-YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVL 340
+ +S A +++N+ CP +YD+ +P KT V F+DW+ VL
Sbjct: 293 RSPPQRSSEKNAIFIINITCPLMVYDVILEPSKTLVEFQDWDGVL 337
>gi|443688702|gb|ELT91309.1| hypothetical protein CAPTEDRAFT_223782 [Capitella teleta]
Length = 1165
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/353 (35%), Positives = 188/353 (53%), Gaps = 16/353 (4%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRD 66
L ++ +RSG + T+ VEELV NS+DA + V V V V ++VVD+G GIS
Sbjct: 5 LSSELQQRIRSGVAITSFTQCVEELVLNSLDASCSCVAVRVDVPLGKIQVVDNGKGISHQ 64
Query: 67 GLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRPNGY 125
L + R+ TSK H+A +D + +G+RGEALAS+ D+ LLE+ ++ G + Y
Sbjct: 65 DLQTVATRY-CTSKC-HVA--EDLNNLVHYGYRGEALASVRDICFLLEVESRYRGNTDTY 120
Query: 126 RKVMK-GSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRI 184
K+ + GS R GTTV DLF+ VR+K + S + ++ + I
Sbjct: 121 LKIFRQGSPLPTTESLKHRPSQGTTVTVHDLFHKMAVRKKALNSVLE--FERLRHRMEAI 178
Query: 185 ALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGY 244
AL+HP VSF + + ++L T SSS L FG ++ ++ ++ +++GY
Sbjct: 179 ALIHPGVSFTLRNDATSSKVLQTHKSSSVLKAFGDLFGSSKERYMKSISCSEDDFKVNGY 238
Query: 245 ISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF-----DCSDSWKANNGFLKGK 299
+S+ + S K Q+V+IN R V K IHKL++HL A +D K G L
Sbjct: 239 LST--EGHSNKNLQFVFINDRLVLKTKIHKLISHLVAKSGFLKQKSNDLPKREAGHLTDS 296
Query: 300 RSKSQACPA-YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
S++ A Y++N+ C + YD+TFDP KT V FK+W VL IE A+R +
Sbjct: 297 PSRNVDRHAIYIINVSCTLTEYDITFDPAKTLVEFKNWPGVLKCIENAVRKLF 349
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 125/253 (49%), Gaps = 50/253 (19%)
Query: 1158 SINKSCLEDAKVLQQVDKKFIPVVA------GGTLAVIDQHAADERIRLEEL---RHKVL 1208
S K L+ +V+ QVD KFI + G + +IDQHAA ER+RLE+L H+
Sbjct: 924 SFTKDMLKSIEVINQVDGKFILCLMDTENQQGKCIVIIDQHAAHERVRLEQLIEDAHENN 983
Query: 1209 SGEGKSVAYLDAEQELVLP--EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQ 1266
S K + + LV+P + ++L + +Q+K G C +F+ +
Sbjct: 984 SDGTKCLKCMAVSPALVVPLTQHAIRVLSAYPKQLKRIGVEC--------TFDPS----- 1030
Query: 1267 RQITVITLLAVP-CI--------------FGVNLSDVDLLEFLQQLADTDGS-STTPPSV 1310
++ + +P C+ F + + L+E + L T G+ S P ++
Sbjct: 1031 ---DLVVVTGIPACVQSRDENEKRRGRSDFLLKFTRELLMEQVDILTATVGANSALPKAI 1087
Query: 1311 LRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQI 1370
L+VL +KAC GAI FGDS+ +EC +V L+ L FQCAHGRP+ +PLV+L K I
Sbjct: 1088 LQVLAAKACGGAIKFGDSISVNECERLVRGLQTCDLPFQCAHGRPSLIPLVDL----KTI 1143
Query: 1371 AQLNNSS---ELW 1380
AQ +S LW
Sbjct: 1144 AQPKTNSCHPNLW 1156
>gi|260836417|ref|XP_002613202.1| hypothetical protein BRAFLDRAFT_210470 [Branchiostoma floridae]
gi|229298587|gb|EEN69211.1| hypothetical protein BRAFLDRAFT_210470 [Branchiostoma floridae]
Length = 362
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/365 (32%), Positives = 198/365 (54%), Gaps = 23/365 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L +VR +RSG + + + VEELV NS+DA AT V V + + N +++VVD+G GI
Sbjct: 2 IRTLDPSVRAQLRSGVSVPSVAQCVEELVLNSLDAAATCVAVRIDLENFWIQVVDNGHGI 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
+D L ++G+R+A TSK + D++ + FG+RGEALASI+ V ++LEI ++
Sbjct: 62 PKDQLSIVGDRYA-TSKCHTVTDLE---SLSFFGYRGEALASIAQVCAVLEIESRHKAST 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
KV + K + + R GTTV ++F+N PVR+K++ S ++ +++ V
Sbjct: 118 KVSTKVFRHGKVVSIFESKAHRPTYGTTVTVHNVFHNLPVRQKFVSVSLER--ERIRERV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
IAL+HP VSF + + L T ++S ++ S FG + L E + +I
Sbjct: 176 AAIALIHPSVSFTLRNENVGGKYLQTHKTNSLVSCFGSLFGTKKSMSLREASHQHEQFKI 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDC----SDSWKANNGFLK 297
SGYIS + K Q++YIN+R + + +HK LN L + + W+ ++
Sbjct: 236 SGYISR--EGHRNKDLQFLYINNRLILRTKVHKFLNLLMSKSTVINRRAGQWEPRTPTVR 293
Query: 298 GKRSKSQACPA--------YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
+ + P ++LN+ CP S YD++ DP KT V FK+WE +L ++ ++
Sbjct: 294 DNSATDASSPGKQRDYYGMFVLNISCPLSEYDISLDPAKTLVEFKEWEALLTCVQDMVQK 353
Query: 350 AWMKK 354
++KK
Sbjct: 354 -FLKK 357
>gi|149566645|ref|XP_001516394.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Ornithorhynchus
anatinus]
Length = 973
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 191/359 (53%), Gaps = 17/359 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LPE VR +RSG + L + +EEL NS+DA A V V V V V+VVD+GSG+
Sbjct: 2 IRHLPEGVRAKLRSGVAIASLGQCIEELALNSIDAEANCVAVRVNVETFRVQVVDNGSGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRP 122
++ + G+R+ TSK G + D+++ +GFRGEALASI+ ++ +E+ +KA G
Sbjct: 62 GKEDVRRAGDRY-FTSKCGSVEDLENPK---FYGFRGEALASIAALANAVEVSSKAGGTA 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K++ K L + D R GTTV + +LFY PVRRK M S + +++ +
Sbjct: 118 KTFLKLIHAGKALDVCEADSVRPSAGTTVTAYNLFYQLPVRRKGMDS--RLEFERIRRRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP VSF + S +L + A +G+ L E+N G E
Sbjct: 176 EALSLMHPSVSFSLKNEASGATVLQLPKAKDVRARFCQIYGLGRAQKLKELNCQGGGFEC 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGF 295
GY+ + ++ + Q++++N R V + +HKL++ L S C + + +
Sbjct: 236 RGYVGA--EAHYNRNMQFLFVNGRLVLRTRLHKLIDFLLRKESVICKPKGGPAGRPPSSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
RS S+ Y++N+RC YD+ +P KT + F+DW+ +LA +E +R A +K+
Sbjct: 294 HPRPRSASERHGVYVVNVRCHVGEYDVCMEPAKTLIEFRDWDALLACVEEGVR-ALLKR 351
>gi|255076207|ref|XP_002501778.1| predicted protein [Micromonas sp. RCC299]
gi|226517042|gb|ACO63036.1| predicted protein [Micromonas sp. RCC299]
Length = 781
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 187/376 (49%), Gaps = 41/376 (10%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGS 61
++ +LP + +RS T++ + ++VEELV NS+DAGA V V + + V V DDG
Sbjct: 47 SLRQLPPDLERKLRSSTIVTSVGQLVEELVCNSIDAGAHDVSVVIDTGSTLSVTVSDDGC 106
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+S + L+ TSK+ ++D+ + + T GFRGEALASI++ +L++ T+A G
Sbjct: 107 GMSVKDVKLVATNRHHTSKIHSISDLGGS--LRTLGFRGEALASIAEFCVLQVTTRAAGS 164
Query: 122 PNGYRKVMKGSKCLYLGID------------------------DERKDVGTTVVSRDLFY 157
+ K+ L L + ++ GT V +DLFY
Sbjct: 165 FETFSKICSKVGGLTLFVRTSHHVQNLTSRSPQGQTLSCGPARNQLTKAGTIVACKDLFY 224
Query: 158 NQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALL 217
PVRR ++ + K L + + R+AL+HP+V F D+ + ++L S L++L
Sbjct: 225 THPVRRGVIRRNIAKQLEDTRVRLYRLALIHPEVGFLLKDVGARHDVLRALPGRSLLSIL 284
Query: 218 ISSFGIEDFSFLDEVNANDGALEISGYISSPYDSISVKA--FQYVYINSRYVCKGPIHKL 275
+FG S L ++ G ++GY+++ S+ + Q+ Y+N R+V + +H
Sbjct: 285 SDAFGKFIASKLIPLSNIIGEFRLTGYVTAATSETSLPSSELQFFYVNRRFVRRTLLHNA 344
Query: 276 LNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD 335
++ A + C+ S + CP Y+L L CP YD+TFDP KT + F D
Sbjct: 345 VSK-AFALACAS-----------LDSTTHGCPGYVLCLECPPDAYDITFDPEKTLIEFTD 392
Query: 336 WEPVLAFIERAIRSAW 351
W+ L ++ A++ W
Sbjct: 393 WKTPLDLLKSALKQVW 408
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 110/216 (50%), Gaps = 24/216 (11%)
Query: 1159 INKSCLEDAKVLQQVDKKFI-PVVAGGTLAVIDQHAADERIRLEELRHKVLSG---EGKS 1214
I+++ L+DAKVL Q KKFI + A G L IDQHAADERI LE+LR ++ GK
Sbjct: 544 ISRNLLDDAKVLTQWGKKFILAMSASGDLLAIDQHAADERILLEQLRASLIRSVDHRGKL 603
Query: 1215 VAY----------LDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNL 1264
Y L Q +L +L+ + + WGW + N
Sbjct: 604 HTYSPASPMPTTVLGRSQPCLLTASELAILRANSSLVWSWGW----------RWEDVANC 653
Query: 1265 LQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIM 1324
+ L +P + G L L E+L+Q++ T +S PP++ R+L SKACR AIM
Sbjct: 654 DGDTDEGVKLTGLPTVEGTMLGADALAEYLRQVSVTGPTSAPPPALHRLLASKACRSAIM 713
Query: 1325 FGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1360
FGD+L EC ++ L +T L CAHGRPT+V L
Sbjct: 714 FGDNLGQDECVALLGSLTRTELPLHCAHGRPTSVML 749
>gi|320163753|gb|EFW40652.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 1219
Score = 169 bits (428), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 135/429 (31%), Positives = 196/429 (45%), Gaps = 100/429 (23%)
Query: 15 VRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVLLGER 74
+RSG + L VEELV NS+DAGAT V V+V + C ++V+D+G+GI+ L +GER
Sbjct: 2 LRSGVSIPSLAACVEELVLNSIDAGATAVDVHVDLQLCRLRVLDNGAGIALRDLARVGER 61
Query: 75 HAATSKL----------GHLADMDDATGIGT---FGFRGEALASISDVS-LLEIITKAHG 120
H ATSK G +A DDA + T +GFRGEALAS++D+S L+EI+T+
Sbjct: 62 H-ATSKFAAGSVSSAAGGVVAIEDDADLMQTLSYYGFRGEALASVADMSTLVEIVTRVDN 120
Query: 121 RPNG-----YRKVMKGSKC-------------------LYLGIDD-ERKDVGTTVVSRDL 155
G Y K+++ + ++G+ +R GT V L
Sbjct: 121 DNAGQSSETYFKLLRPTPSENRNPATQRSSEHEKPLPQYHVGVSAVKRVTAGTIVTVHGL 180
Query: 156 FYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA 215
F PVR+ M ++P L ++ V IAL +P V+ D + +L T +S L+
Sbjct: 181 FATMPVRQGVMLANPVLTLEHARRAVEAIALANPGVALSVHDDHNARRVLTTRRLTSALS 240
Query: 216 LLISSFGIEDFSFLDEV-----------------NANDGALEISGYISSPYDSISV---- 254
+ FG+E + V N A+ + ++P SI V
Sbjct: 241 VFKLLFGVERVGVTENVDMSLSCEFSNLTTRSALNQPQAAVSETLAAAAPESSILVRSVT 300
Query: 255 ------------------KAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG-- 294
K+ Q+ +IN R V HKL+N L W+ G
Sbjct: 301 VVDYSLRGFLCTEPQPGAKSMQFFFINRRRVLHTRFHKLVNQLM------RQWQGTRGPR 354
Query: 295 FL-------------KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLA 341
F+ RS +A A++LN+ CP LYD+TFDP KT V F DWE LA
Sbjct: 355 FVSQTLPVGRDMHASNNSRSFDKASCAWVLNMTCPPGLYDITFDPAKTLVEFADWETPLA 414
Query: 342 FIERAIRSA 350
+E+AIR+A
Sbjct: 415 LVEQAIRTA 423
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 109/256 (42%), Gaps = 62/256 (24%)
Query: 1169 VLQQVDKKFIPVVAGG-------------TLAVIDQHAADERIRLEELRHKVLS----GE 1211
VL QV+++F+ V+A G + +DQHAA ERIRLE +V G
Sbjct: 914 VLSQVERQFVVVLAPGDDQPSALSDDGNDLIFCVDQHAAHERIRLERFTREVYQSNDQGT 973
Query: 1212 GKS-------------VAYLDAEQELVLP------------EIGYQL--LQNFAEQIKDW 1244
G S +A AE L+ P IG + L++ AE
Sbjct: 974 GSSQVLKSETLKDPLRLAMTVAEARLLEPFRDNLEACGIRFRIGSNVNALEDNAECAVMI 1033
Query: 1245 GWICNIHTQGSRS-FNKNLNLLQRQI----------------TVITLLAVPCIFGVNLSD 1287
+ I + SR+ + ++ + Q+ TV +L + G+ +S
Sbjct: 1034 DAVPPIMLEASRAEYISGQHVSRFQLEKQARALVGGADDVAQTVSSLTQAAILHGL-IST 1092
Query: 1288 VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1347
+ QQ G+ P ++ L SKAC GAI FGD+L +C +V L +L
Sbjct: 1093 LVRSRIDQQCHTGGGAYDLPLTISSALASKACHGAIKFGDTLSIDQCKSLVNTLSDCTLP 1152
Query: 1348 FQCAHGRPTTVPLVNL 1363
FQCAHGRP+ PLV++
Sbjct: 1153 FQCAHGRPSIAPLVSV 1168
>gi|393216106|gb|EJD01597.1| hypothetical protein FOMMEDRAFT_148054 [Fomitiporia mediterranea
MF3/22]
Length = 861
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 191/370 (51%), Gaps = 34/370 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I RL A R+ +RS +L L +++ ELV NS+DAGA + V V + V DDG+GI
Sbjct: 6 IERLDTATRSKIRSTQILTSLPQIISELVQNSLDAGAKSIDVGVHCADWMCWVGDDGTGI 65
Query: 64 SRDGLVLL-----GERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 118
S+DGL L+ G R+ ++SK +L ++ + TFGFRGEALAS +D+S +EI ++
Sbjct: 66 SKDGLSLIAQGMEGGRY-SSSKSYNLTSLEH---VNTFGFRGEALASAADLSCIEISSRT 121
Query: 119 HGRPNGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+ ++KG + LY G + R+ GTTV RD+F++ P+RR SP + +
Sbjct: 122 SRSKECWSVILKGGEKLYEGPSLRWRRERAGTTVSIRDVFFSLPIRR-LSHPSPSRTIEL 180
Query: 177 VKKCVLRIALVHPKVSFKFIDMESE-------DELLCTCSSSSPLALLISSFGIEDFSFL 229
V++ + ALV P VSF D E +L +SS +A FG +
Sbjct: 181 VRRELETFALVFPHVSFTLKDASKEYCGTIDKSRVLTIPKTSSSMATFRHLFGRALVEHV 240
Query: 230 DEVNANDGALEISGYIS---SPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCS 286
D + G++++ G+IS SP K++Q++Y+N + +H++++ +S
Sbjct: 241 DTIYVQSGSMKLEGFISLVGSPS-----KSYQFLYVNRHILDSCELHRIIDKCFSSSTFG 295
Query: 287 DSWKANNGFLKGKR-------SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV 339
+G L R KS+ P Y+LNL P D +P KT V F+D V
Sbjct: 296 KHAYDESGELPSLRPGTRRSPRKSELRPVYVLNLTLPARNVDNCLEPSKTAVQFQDQNAV 355
Query: 340 LAFIERAIRS 349
+F+E+ I+S
Sbjct: 356 RSFLEQTIQS 365
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 122/295 (41%), Gaps = 78/295 (26%)
Query: 1137 DNILDISSGLLHLTGEF-FIPDSINKSCLEDAKVLQQVDKKFIPVVAG------------ 1183
D +SG+L GE P ++ CLE +VL QVD KFI +
Sbjct: 555 DQTFSTTSGILAELGEASMFP--FSRECLEKLEVLGQVDFKFIACLIDEESHAPSSSDAE 612
Query: 1184 ---GT---------LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV----LP 1227
GT L ++DQHAADER+R+E + G YLD ++E V L
Sbjct: 613 GIPGTSERGSDVRMLVLVDQHAADERVRVERYLKSLCLG------YLDRDREGVERRALD 666
Query: 1228 EIGYQLLQNF-------AEQIKD----WGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
LL F +E+IK WG G R +N N ++ +
Sbjct: 667 PPVPTLLTKFERDRLLDSERIKRAFSAWGLDFVDAPTGDRMCEENDN--DEGYGLVHCNS 724
Query: 1277 VPCIFGVNLSDV---DLLEFL-------------------QQLADTDGSSTT------PP 1308
VP + L D DL E + Q ADTD S P
Sbjct: 725 VPEVVADKLLDGSQGDLRELVKGYLARLEAEGMDESQGPSQAAADTDEFSWLKALRHCPR 784
Query: 1309 SVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
+ ++NS+ACRGAIMF D L +C ++ +L +T+ FQCAHGRP+ V L +
Sbjct: 785 ELTELVNSRACRGAIMFNDRLSVEQCKRLLRQLSETAFPFQCAHGRPSVVALTTI 839
>gi|292627044|ref|XP_696739.3| PREDICTED: DNA mismatch repair protein Mlh3 [Danio rerio]
Length = 1164
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 187/369 (50%), Gaps = 37/369 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LP V+ +RSG +F L + VEEL+ NS+DAGAT V V + + C ++V+D+GSG+
Sbjct: 2 IKSLPINVQAQLRSGVAIFSLQQCVEELILNSIDAGATCVAVKIDIEACKLQVIDNGSGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRP 122
+ + +G R+ TSK L D+D+ + +GFRGEA++SI ++ ++EI ++
Sbjct: 62 CLEDMEKVGLRY-NTSKCSSLEDLDN---LHFYGFRGEAISSIVSLAEMVEISSRTKQSV 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
Y K + L R GTTV +LF+N PVRRK M P +++ V
Sbjct: 118 KTYVKSFNETNALEVFEAQTVRPSAGTTVSVYNLFHNMPVRRKRMD--PVLETERIRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
I+L+HP VSF S ++ +SS + G+ L EVN +I
Sbjct: 176 EAISLMHPSVSFTVKKENSAHMMVQLSKTSSTYYRFVQIHGLNRAQKLGEVNYEHEQFQI 235
Query: 242 SGYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHL-------------AASFDCS 286
+G+I Y++ + Q++++N R + K IHK LN L S+ +
Sbjct: 236 TGHIGREGHYNN----SLQFLFVNERLLLKTRIHKTLNCLLKRVSGAARQNNSPTSYPVT 291
Query: 287 DSWKANNGF-LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIER 345
S K G+ L G Y++N++C +S YD+ +P K+ + FKDW+ VL IE
Sbjct: 292 SSPKQKGGYDLHG---------IYVINIKCHYSEYDICLEPAKSLIEFKDWDNVLICIEE 342
Query: 346 AIRSAWMKK 354
+++ K+
Sbjct: 343 GVKAFLTKE 351
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVA------------- 1182
+D++SG L P K+ + +V+ QVDKKF+ +
Sbjct: 883 VDVTSGQAEGLAVKIHNILFPYRFTKNMIHTMRVINQVDKKFLACLINTAGQNTSESSTD 942
Query: 1183 -GGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQI 1241
G L ++DQHAA ER+RLE L ++ + ++ L + L N E+
Sbjct: 943 EGNLLVLVDQHAAHERVRLEGL----IADSYEDDPDTPGKKRLCSSRVTPPLEINVTEEE 998
Query: 1242 KDWGWICNIHTQG-SRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL---------- 1290
C QG R ++ + + + L ++P F + +L
Sbjct: 999 LRLLRSC----QGFLRGLALDVRFPKSESLSVFLESLPACF-IEKESTELRRGRRSDYLR 1053
Query: 1291 --LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1348
+E L+ G P +V VL S+AC GAI F D L EC +V L L F
Sbjct: 1054 EHIELLRSTGRVRG--ILPLTVHNVLASQACHGAIKFNDVLNKEECCSLVSSLSSCRLPF 1111
Query: 1349 QCAHGRPTTVPLVNLEALHKQ 1369
QCAHGRP+ VPL +L L +Q
Sbjct: 1112 QCAHGRPSIVPLADLHHLEEQ 1132
>gi|330801903|ref|XP_003288962.1| hypothetical protein DICPUDRAFT_153264 [Dictyostelium purpureum]
gi|325080993|gb|EGC34526.1| hypothetical protein DICPUDRAFT_153264 [Dictyostelium purpureum]
Length = 1482
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 187/360 (51%), Gaps = 25/360 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I +L E V VRS V+ L + +EE+VFNS+DA AT + + + + N +V D+G GI
Sbjct: 20 IKKLEEDVSLKVRSSAVIVSLEQAIEEIVFNSIDAQATSIVISINLSNLTFEVKDNGFGI 79
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 123
+ +GE H+ TSK+ L D+ + TFG+RGE+LAS+SDVS L+I++ ++ N
Sbjct: 80 NYGNFKTIGE-HSCTSKINKLTDL---KSLSTFGYRGESLASLSDVSNLDIVSTSNN--N 133
Query: 124 GYRKVMKGSKCLYLGIDDERKDV-------GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+K KC D + + GT V RDLF N PVRR+ + K++
Sbjct: 134 TVQKTFNFGKCEQFKTIDSQDSIHNKPISNGTVVKVRDLFKNFPVRRQNLFHPNLKLI-- 191
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA-- 234
+KK + IAL P + F D +L T +S ++ +G E + L+ + +
Sbjct: 192 LKKRIEIIALSFPNIRFSVYDETKSLNILKTPKDTSFMSYFKHFYGQEMANKLEFIVSEG 251
Query: 235 --NDGALEISGYISSPYDS-ISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWK- 290
N+ + +SGY+SSP K+FQY Y+N+R V +H+ +N L F ++ +
Sbjct: 252 FPNEKSFYLSGYVSSPQKKGHPNKSFQYFYLNNRIVLNTKLHRHINQLYHKFRLFNATRR 311
Query: 291 --ANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDP-LKTHVVFKDWEPVLAFIERAI 347
AN + K+ + P ++L L+C Y+ +++P KT + F DW+ L I+ I
Sbjct: 312 AHANTSKI-PKKEVIDSNPIFILFLKCSQLEYERSYEPSSKTFLEFNDWKKPLGEIQNVI 370
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 110/213 (51%), Gaps = 22/213 (10%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I + L+D K + Q DKKF+ A G + V+DQHA ERI+LE L K + +
Sbjct: 1272 IPREMLKDFKFITQWDKKFLVCEANGIVLVLDQHAVSERIKLETLEKKYFGENKFDLCPM 1331
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWG--WICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
L +L++ +++ ++DWG W N T IT+L
Sbjct: 1332 PERSRWSLTAYELELMKIYSKNLEDWGFEWRSNP-------------------TSITILQ 1372
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGS-STTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1335
VP V L DL EFL L + GS ST PP+ R+L SKACR AI FG +L C
Sbjct: 1373 VPMFCLVGLGVNDLREFLYLLENNKGSPSTKPPAAHRILASKACRTAIKFGHNLTKEVCI 1432
Query: 1336 LIVEELKQTSLCFQCAHGRPTTVPLVNLEALHK 1368
++E+L + ++ FQCAHGRP+ +PL+N +L K
Sbjct: 1433 KLLEDLNECNIPFQCAHGRPSIIPLINYSSLFK 1465
>gi|353409902|ref|NP_001238771.1| mutL homolog 3 [Xenopus (Silurana) tropicalis]
Length = 1284
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 191/359 (53%), Gaps = 19/359 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L E V++ +RSG + + + VEELV NS+DA +T + V + + ++VVD+GSG+
Sbjct: 2 IRCLKEEVQHKLRSGVTISSVGQCVEELVLNSIDALSTCIAVRIDLETVRIQVVDNGSGL 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
+ L LG R+ TSK L D+++ + GFRGEA+ASI+DV S++EI +K
Sbjct: 62 CPEDLDRLGMRY-FTSKCHSLNDLEN---LKFHGFRGEAIASIADVSSIVEISSKCKNTS 117
Query: 123 NGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+++ K L + + R GTT +LFYN PVRRK M + + ++++ V
Sbjct: 118 KTFYKLIQNGKLLSVQEANTSRPSAGTTFSVYNLFYNLPVRRKCMDQTVE--FENIRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + +L + + +G+ L E+ ++
Sbjct: 176 ESLSLIHPSISFSLKNDAMHSVVLQLAKTKDVCSRFCQIYGLPRSQKLCEIQHKVREFDM 235
Query: 242 SGYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
GYIS Y+ K QY+Y+N+R V K +H+ ++ L K N
Sbjct: 236 WGYISCEGHYN----KRMQYLYVNNRLVLKTKLHQHIDFLLRKESLICKPKNINVGKTSS 291
Query: 300 RSKSQACP----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
+S++C +++N+ C +S YD+ F+P KT + FKDW+ VL F+E ++ A++K+
Sbjct: 292 PGRSRSCQELYGIFIININCHYSEYDVCFEPAKTLIEFKDWDTVLRFVEEGVK-AFLKR 349
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 117/263 (44%), Gaps = 53/263 (20%)
Query: 1140 LDISSGLLHLTG----EFFIPDSINKSCLEDAKVLQQVDKKFIPVVA-----------GG 1184
+D+S G + P K + KVLQQVD KFI + G
Sbjct: 957 VDVSRGQTNTLAVKIHNILYPYRFTKEMMHSVKVLQQVDNKFIACLMNTKMKEGSEQDGN 1016
Query: 1185 TLAVIDQHAADERIRLEELRHKVL-------SGEGK-SVAYLDAEQELVLPEIGYQLLQN 1236
L ++DQHAA ER+RLE+L SG + ++ + EL + EI Y+LL+
Sbjct: 1017 LLVLVDQHAAHERVRLEQLIADSYESAPEDDSGRRQLKMSVISPPLELNVTEIQYRLLRV 1076
Query: 1237 FAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF-----------GVNL 1285
A + S+S +L+ Q + + AVP F +
Sbjct: 1077 LA--------------RSSQSIGLSLSFPDTQGPCVLVSAVPVCFVEREANELHRRRSTV 1122
Query: 1286 SDVDLLEFLQQLADT-----DGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1340
+ + EFLQ+ + T P +VL+VL S+AC GAI F D L +C +++
Sbjct: 1123 AKNLVQEFLQEQVELLQMTRRAGGTIPLTVLKVLASQACHGAIKFNDQLSLDDCKHLMQC 1182
Query: 1341 LKQTSLCFQCAHGRPTTVPLVNL 1363
L + SL FQCAHGRP +PL ++
Sbjct: 1183 LSRCSLPFQCAHGRPAILPLADM 1205
>gi|449274804|gb|EMC83882.1| DNA mismatch repair protein Mlh3 [Columba livia]
Length = 1440
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 183/354 (51%), Gaps = 17/354 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I RL E VR +RSG + + + VEELV NS+DA AT V + + ++VVD+GSG+
Sbjct: 2 IKRLVEDVRARLRSGVTISSVGQCVEELVLNSIDAKATCVAIRADLEAFKIQVVDNGSGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
R+ L +G+R+ TSK + D+++ T +GFRGEA+ASI+++ +++E+ +K
Sbjct: 62 GREDLNAMGKRY-FTSKCSSVGDLENLT---FYGFRGEAVASIANMATVVEVSSKTSRTA 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + L + + R GTTV +LFY PVR+K M P L V+ V
Sbjct: 118 KTFVKLFHNGQALEVCEAELSRPSGGTTVTVCNLFYQLPVRKKRMD--PVLELERVRHKV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
I+L+HP VS + + +L + + +G+ L E+N G E+
Sbjct: 176 EAISLMHPSVSLSLRNDAAASMVLQLPKTRDIYSRFCQIYGLGRSQKLREINHKSGGFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYIS + K Q++Y+N R V K IHKL++ L S C + G
Sbjct: 236 SGYIS--IEGHYNKNMQFLYVNRRLVLKTRIHKLIDFLLRKESVICCKAKSGPVSRQAGA 293
Query: 300 RSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+ C ++LN+ C +S YD+ +P KT + F++W+ +L IE ++
Sbjct: 294 SAGRYRCVPELYGIFILNVTCAYSDYDVCLEPAKTLIEFQNWDVLLTCIEEGVK 347
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 47/266 (17%)
Query: 1153 FFIPDSINKSCLEDAKVLQQVDKKFIPVVA-----------GGTLAVIDQHAADERIRLE 1201
P K + +VLQQVD KFI + G L ++DQHAA ERIRLE
Sbjct: 1178 ILYPYRFTKDMVHSMQVLQQVDNKFIACLINTRNEMDKKTDGNLLILVDQHAAHERIRLE 1237
Query: 1202 EL------RHKVLSGEGKSVA-YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1254
+L + G+ K ++ + E+ + E + L+ + ++D G +
Sbjct: 1238 QLIADSYDKEAAARGKKKLLSSAISPPLEIEVTEEQRRFLRCCYKNLEDLGLELSFPENS 1297
Query: 1255 SR----------SFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSS 1304
S S ++ N LQR+ +T + +L++ +L T G+
Sbjct: 1298 SSLILVRKVPLCSTERDANELQRKRQPVTKSVIE----------ELIQEQVELVQTTGAG 1347
Query: 1305 ---TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV 1361
T P + L++ S+AC GAI F + L E +++ L L FQCAHGRP+ +PL
Sbjct: 1348 ARGTLPLTFLKMFASQACHGAIKFNEHLTLEESCRLIKALSSCQLPFQCAHGRPSMMPLA 1407
Query: 1362 NLEALHKQ------IAQLNNSSELWH 1381
+++ L ++ +A+L + WH
Sbjct: 1408 DIDHLQQEKQPKPNLARLRKMARAWH 1433
>gi|431839136|gb|ELK01063.1| DNA mismatch repair protein Mlh3 [Pteropus alecto]
Length = 1418
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 201/396 (50%), Gaps = 29/396 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAICSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGV 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALASI+++ S +EI +K +
Sbjct: 62 GSDDVDKMGNRY-FTSKCSSMQDLENPR---FYGFRGEALASIANMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQFPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+N E+
Sbjct: 176 DALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLSKSQKLREINFKYKKFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R V K +HKL++ L S C K NG G+
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLKTKLHKLIDFLLRKESIIC----KPKNGSASGQ 289
Query: 300 -------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
RS + Y++N++C YD+ +P KT + F++W+ VL I+ I+ ++
Sbjct: 290 MNSSPRLRSNPELHGIYVINIQCQFCEYDVCMEPAKTLIEFQNWDTVLVCIQEGIK-MFL 348
Query: 353 KK----IAHDSFDV-DMLEDAELPLESSRFQSHQSS 383
KK + D+ + ED + L S+ Q H+SS
Sbjct: 349 KKEKLFVELSGEDIKEFSEDNDFSLFSTTLQKHESS 384
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 134/301 (44%), Gaps = 57/301 (18%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1122 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1181
Query: 1186 LAV-IDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDW 1244
L V +DQHAA ER+RLE+L ++ K ++L+ I L E+ +
Sbjct: 1182 LLVLVDQHAAHERVRLEQL---IIDSYEKQQPQGSGRKKLLSSTISPPLEITVTEEQRRL 1238
Query: 1245 GWICNIHTQGSRSFNKNLNLLQRQI-------TVITLLAVPCIF-------------GVN 1284
W ++KNL L I +++ + VP F V
Sbjct: 1239 LWC----------YHKNLEDLGLGIIFPDTSDSLVLVGKVPLCFVEREANEVRRGRSTVA 1288
Query: 1285 LSDVD--LLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEEL 1341
S V+ + E ++ L T G T P +V +VL S+AC GAI F D L EC ++E L
Sbjct: 1289 KSIVEEFIREQVELLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLEECYRLIEAL 1348
Query: 1342 KQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRASR 1395
L FQCAHGRP+ +PL +++ L ++ +A+L ++ WH + E R S+
Sbjct: 1349 SWCQLPFQCAHGRPSILPLADIDHLEQEKQIKPNLAKLRKMAQAWHLFGKAEGCDSRQSQ 1408
Query: 1396 R 1396
+
Sbjct: 1409 Q 1409
>gi|348531369|ref|XP_003453182.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Oreochromis
niloticus]
Length = 759
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 193/357 (54%), Gaps = 23/357 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LP+ V+ +RSG + L + VEEL+ NS+DAGAT V V + + ++V+D+G+G+
Sbjct: 2 IKCLPKEVQGKLRSGVAIPSLQQCVEELILNSIDAGATCVGVRMDMEAFKIQVIDNGAGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALAS-ISDVSLLEIITKAHGRP 122
S + + +G R+ TSK +AD+D+ + +GFRGEALAS +S +L+EI ++
Sbjct: 62 SAEDMDCVGNRY-HTSKCTSVADLDN---LRWYGFRGEALASLVSLATLVEISSRTRSSV 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQS--SPKKVLHSVKK 179
+ K+ K K L + R GTTV+ + F+N PVRRK + + +++ H V
Sbjct: 118 KTHVKIFKEGKGLEVFEAEAARPSAGTTVIICNFFHNMPVRRKRVDAVLEGERIRHRVGA 177
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
I+L+HP VSF + + ++ + + + + L E+N
Sbjct: 178 ----ISLMHPSVSFTLKNDCTGAMMVQLPKARNTYHRFVQIHNLGQAEKLGEMNHTYKQF 233
Query: 240 EISGYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLN----HLAASFDCSDSWKANN 293
E+ GYI Y++ + Q++Y+N R + K IHKLLN L +S +DS +
Sbjct: 234 EVMGYIGREGHYNN----SLQFLYVNERLLLKTHIHKLLNVLLRRLTSSNQKNDSPDWQS 289
Query: 294 GFLKGKRSKSQAC-PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
F K +SQ Y++N++C +S YD++ +P KT + FKDW+ +L +E A+++
Sbjct: 290 VFRSPKHKRSQDLYGVYIINIKCSYSEYDISLEPAKTLIEFKDWDGILLCVEEAVKA 346
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 1291 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1350
+E L G T P +VL+VL S AC GAI F D+L EC +V L L FQC
Sbjct: 659 IELLHSTGRVRG--TLPLTVLKVLASLACHGAIKFNDTLSRDECYSLVASLSACQLPFQC 716
Query: 1351 AHGRPTTVPLVNLEALHK 1368
AHGRP+ VPLV++ L K
Sbjct: 717 AHGRPSIVPLVDVLHLDK 734
>gi|405974291|gb|EKC38947.1| DNA mismatch repair protein Mlh3 [Crassostrea gigas]
Length = 1717
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 185/352 (52%), Gaps = 12/352 (3%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRD 66
L + +++ +R+G L ++ VEELV NS+DAGAT + V V + ++V D+G GI +D
Sbjct: 11 LTQDLQSLLRTGVALTSFSQCVEELVLNSIDAGATCIAVRVDMSCFKIQVFDNGHGIQKD 70
Query: 67 GLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRPNGY 125
L + ER+ TSK + D+D+ + FG+RGEA+AS+ ++S +LEI+++ P Y
Sbjct: 71 DLETVAERY-YTSKCHTVKDLDN---LCYFGYRGEAVASLREISAVLEIVSRTKFLPQSY 126
Query: 126 RKVMK-GSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRI 184
K+ + G + VGTT+ S +LFYN PVR+K+ + + V++ + I
Sbjct: 127 CKIFQNGDPLPVVESTVPPPSVGTTITSHNLFYNFPVRQKHTNQNLE--FEKVRQKLEAI 184
Query: 185 ALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGY 244
ALVH VS + S +L T ++S L+ S FG S L + A+ +I Y
Sbjct: 185 ALVHCGVSISLRNDISGQVVLQTHKTNSLLSTFTSLFGAAKSSSLCAMEADTEHFKIKAY 244
Query: 245 ISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKRSKS 303
+ S K Q++Y+N R V K + K++N L S L+ +K
Sbjct: 245 FGK--EGSSRKDHQFIYVNKRIVLKTEVSKIVNSILGKSLIVKAKTSYTKALLEDSPTKH 302
Query: 304 -QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P +++ L C S YD+TF+P KT V FK WE + +E ++S +K+
Sbjct: 303 VDRYPIFVILLECAFSEYDITFEPAKTFVQFKHWESLKDSLENLVQSFLVKE 354
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 101/186 (54%), Gaps = 16/186 (8%)
Query: 1186 LAVIDQHAADERIRLEELRHKVL-SGEGKSV--AYLDAEQELVLPEIGYQLLQNFAEQIK 1242
L V DQHAA ER+RLE+ S EG+ L +EL L E ++++ F E+
Sbjct: 1522 LVVFDQHAAHERVRLEQFTKDCYESSEGRQFKSCILSPPEELKLTEEDVRVMEAFREEFS 1581
Query: 1243 DWGWICNIHTQGSRSFNKNLNLLQRQI-TVITLLAVPCIFGVNLSDVDLLEFLQQLADTD 1301
G IC +Q SR ++L ++I T IT V G+ + +++L+FL+ T
Sbjct: 1582 RIG-ICFSRSQLSRD-----SVLIKEIPTCITTKEVKQREGIVI--LNILKFLKS---TK 1630
Query: 1302 GSST-TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1360
G+ P ++ +++ ACRGAI FGD+L EC +++ L L FQCAHGRP+ +PL
Sbjct: 1631 GAKNHMPLTIHKLMCGLACRGAIKFGDALTREECGDLLQSLSLCDLPFQCAHGRPSVMPL 1690
Query: 1361 VNLEAL 1366
+ + L
Sbjct: 1691 IATDKL 1696
>gi|449504424|ref|XP_002199972.2| PREDICTED: DNA mismatch repair protein Mlh3 [Taeniopygia guttata]
Length = 1069
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 189/355 (53%), Gaps = 20/355 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I RL E VR +RS + L VEELV NS+DA AT V + V + ++VVD+GSG+
Sbjct: 2 IRRLVEDVRARLRSEVTVNSLGHCVEELVLNSIDAKATCVAIRVDLEAFKIQVVDNGSGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
++ L +G+R+ TSK + D+++ T +GFRGEALASI+++ S++EI +K
Sbjct: 62 GKEDLKAVGKRY-FTSKCSSVRDLENLT---FYGFRGEALASIANMASVVEISSKTSRTA 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + L + + R GTTV +LF+ PVRRK M P + V++ V
Sbjct: 118 KTFMKLFHNGQALEVCEAELNRPSGGTTVTVCNLFHQLPVRRKCM--DPVLEIERVRQKV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP VS + S +L + + +G+ L E+N G EI
Sbjct: 176 EAVSLMHPSVSLSLRNDVSCSMVLQLPKTRDVYSRFCQIYGLGRSQKLREINHKSGGFEI 235
Query: 242 SGYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-SDSWKAN---N 293
SG+IS+ Y+ K Q++Y+N R V K +HKL++ L S C + S AN N
Sbjct: 236 SGFISTEGHYN----KNMQFLYVNRRLVLKTRLHKLIDFLLRKESVICKAKSVPANRQAN 291
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS + ++LN+ C +S YD+ +P KT + F++W+ +L IE ++
Sbjct: 292 SSPGRYRSGPELYGIFILNVTCAYSDYDVCLEPAKTLIEFQNWDVLLTCIEEGVK 346
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 125/287 (43%), Gaps = 59/287 (20%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVA-----------GG 1184
+D++SG L P K + +VLQQVD KFI + G
Sbjct: 791 VDVTSGQADSLAVKIHNILYPYRFTKDMVHSMQVLQQVDNKFIACLINTRNGMEKKADGN 850
Query: 1185 TLAVIDQHAADERIRLEEL------RHKVLSGEGKSVAY-LDAEQELVLPEIGYQLLQNF 1237
L ++DQHAA ERIRLE+L + G+ K ++ + E+ + E + L+
Sbjct: 851 LLILVDQHAAHERIRLEQLIADSYEKEAAACGKKKILSSSISPPLEIEVTEEQRRFLRCC 910
Query: 1238 AEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF-------------GVN 1284
+ ++D G L+ + ++I + VP F +
Sbjct: 911 YKNLEDLGL--------------ELSFPETNNSLILVRKVPMCFIEREANELRRKRQPIT 956
Query: 1285 LSDVDLL--EFLQQLADTDGSS--TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1340
S V+ L E ++ L T G + T P + L+VL S+AC GAI F + L E ++E
Sbjct: 957 KSIVEELIQEQVELLQTTRGGARGTLPLTFLKVLASQACHGAIKFNEHLTLEESCRLIEA 1016
Query: 1341 LKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWH 1381
L L FQCAHGRP+ +PL +++ L ++ + +L + W
Sbjct: 1017 LSSCKLPFQCAHGRPSMLPLADIDHLQQEKQPKPNLTRLRKMARAWQ 1063
>gi|157822465|ref|NP_001101513.1| DNA mismatch repair protein Mlh3 [Rattus norvegicus]
gi|149025195|gb|EDL81562.1| mutL homolog 3 (E. coli) (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1442
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 187/354 (52%), Gaps = 19/354 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG L L + VEEL NS+DA AT V + V + V+V+D+G G+
Sbjct: 2 IRCLSDEVQAKLRSGLALSSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
+ D + +G R+ TSK + D+++ T +GFRGEALASI+D+ S +EI +K
Sbjct: 62 AGDDVEKVGNRY-FTSKCHSVRDLENPT---FYGFRGEALASIADMASAVEISSKKSTTL 117
Query: 123 NGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 118 KTFVKMFQNGKALAAREADLTRPSVGTTVTVYNLFYQFPVRRKSM--DPRLEFEKVRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMILQLPKTKDICSRFCQIYGLGKSQKLREIHYKYKEFEF 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNG 294
+GYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 236 NGYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS S+ Y++N++CP YD+ +P KT + F++W+ VL ++ I+
Sbjct: 294 --PRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQNWDTVLICVQEGIK 345
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 127/293 (43%), Gaps = 59/293 (20%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1146 VDVSSGQAGSLAVKIHNVLYPYRFTKEMIHSVQVLQQVDNKFIACLMSSRTDGSGQAGGN 1205
Query: 1186 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L V +DQHAA ER+RLE+L R K+LS + + + + E
Sbjct: 1206 LLVLVDQHAAHERVRLEQLITDSYEKQAPQSAGRKKLLS------STIIPPLAITVSEEQ 1259
Query: 1231 YQLLQNFAEQIKDWGWICNIHTQGSRSF----------NKNLNLLQRQITVITLLAVPCI 1280
+LL+++ + ++D G S + N L+R + +T V +
Sbjct: 1260 RRLLRSYHKHLEDLGLELLFPDASDSSILVGKVPLCFVEREANELRRGRSPVTKSIVEEL 1319
Query: 1281 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1340
+ LE LQ G T P +V +VL S+AC GAI F D L E ++E
Sbjct: 1320 IR------EQLELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDRLSLEESCRLIEA 1371
Query: 1341 LKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1387
L L FQCAHGRP+ +PL +L+ L ++ + +L + WH + E
Sbjct: 1372 LSLCQLPFQCAHGRPSMLPLADLDHLEQEKQVKPNLTKLRKMAHAWHLFGKAE 1424
>gi|149025196|gb|EDL81563.1| mutL homolog 3 (E. coli) (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 1233
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 187/354 (52%), Gaps = 19/354 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG L L + VEEL NS+DA AT V + V + V+V+D+G G+
Sbjct: 2 IRCLSDEVQAKLRSGLALSSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
+ D + +G R+ TSK + D+++ T +GFRGEALASI+D+ S +EI +K
Sbjct: 62 AGDDVEKVGNRY-FTSKCHSVRDLENPT---FYGFRGEALASIADMASAVEISSKKSTTL 117
Query: 123 NGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 118 KTFVKMFQNGKALAAREADLTRPSVGTTVTVYNLFYQFPVRRKSM--DPRLEFEKVRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMILQLPKTKDICSRFCQIYGLGKSQKLREIHYKYKEFEF 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNG 294
+GYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 236 NGYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS S+ Y++N++CP YD+ +P KT + F++W+ VL ++ I+
Sbjct: 294 --PRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQNWDTVLICVQEGIK 345
Score = 47.8 bits (112), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 15/79 (18%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1114 VDVSSGQAGSLAVKIHNVLYPYRFTKEMIHSVQVLQQVDNKFIACLMSSRTDGSGQAGGN 1173
Query: 1186 LAV-IDQHAADERIRLEEL 1203
L V +DQHAA ER+RLE+L
Sbjct: 1174 LLVLVDQHAAHERVRLEQL 1192
>gi|410898385|ref|XP_003962678.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Takifugu
rubripes]
Length = 791
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 188/356 (52%), Gaps = 23/356 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LP V+ +RSG + L + VEEL+ NS+DA AT V V + + V+V+D+G+G+
Sbjct: 5 IKCLPVEVQGKLRSGVTIPSLQQCVEELILNSIDAEATCVGVRMDMEAFKVQVIDNGNGM 64
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALAS-ISDVSLLEIITKAHGRP 122
D + +G R+ TSK + D+D+ + +GFRGEALAS +S +L+EI ++
Sbjct: 65 DADSMDCVGNRY-HTSKCYRVEDLDN---LSWYGFRGEALASLVSLATLVEISSRTKSSL 120
Query: 123 NGYRKVMK-GSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQS--SPKKVLHSVKK 179
+ K+ K G + R GTTVV + FYN PVRRK + +++ H V+
Sbjct: 121 KTHVKIFKDGKGTEVYEAEKSRPSAGTTVVLCNFFYNMPVRRKRLDPVLEGERIRHRVEA 180
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
I+L+HP VSF + + L+ + + + G+ L EVN G
Sbjct: 181 ----ISLMHPSVSFTLKNDCTATMLVQLPKAKNTYHRFVQIHGLHRAQKLGEVNITHGRF 236
Query: 240 EISGYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHL----AASFDCSDSWKANN 293
+ G+I Y++ S Q++Y+N R + K IHKL+N L + + ++
Sbjct: 237 SVVGHIGREGHYNNCS----QFLYVNERLLLKTRIHKLINFLLRKPSTNQKNDGGEQSVV 292
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
G K KRS+ + Y+LN++C S YD++ +P KT + FKDW+ VL +E A++S
Sbjct: 293 GSPKNKRSQ-ELHGVYVLNIKCCCSEYDISLEPAKTLIEFKDWDGVLTCVEEAVKS 347
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 1140 LDIS----SGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFI--------------PVV 1181
LDIS GL P +K+ + KV+ QVDKKF+ P
Sbjct: 512 LDISRQQADGLTVKIHNVLYPYRFSKAMIHSMKVIHQVDKKFLACLISTKDSQTTDSPDS 571
Query: 1182 AGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQI 1241
G L ++DQHAA ER+RLE L + + +LP + + + E++
Sbjct: 572 EGNLLVLVDQHAAHERVRLENLIADSYEDDPAAPGERRLCSSSILPPLEISVTE---EEL 628
Query: 1242 KDWGWICNIHTQGSRSFNKNLNLLQRQITV-------ITLLAVPCIFG-----------V 1283
+ + RSF +L L ++ I + VP F +
Sbjct: 629 RLF-----------RSFQPHLQRLGLEVKFPQAEEPQILVGKVPVCFTEKESNELRRGRL 677
Query: 1284 NLSDVDLLEFLQQLADTDGSS-----TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1338
++ + E+LQ+ D S+ T P +VL+VL S AC GAI F DSL EC +V
Sbjct: 678 SVIRPIVEEYLQEQLDLLRSTGRVRGTLPLTVLKVLASLACHGAIKFNDSLSKDECHSLV 737
Query: 1339 EELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLNNSSEL 1379
L L FQCAHGRP+ PLV++ L K L N +L
Sbjct: 738 ASLSSCQLPFQCAHGRPSIAPLVDILHLDKDQKVLPNLQKL 778
>gi|384252607|gb|EIE26083.1| hypothetical protein COCSUDRAFT_40245 [Coccomyxa subellipsoidea
C-169]
Length = 1051
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 124/228 (54%), Gaps = 23/228 (10%)
Query: 1154 FIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGK 1213
+P SI K L A+ L+QVD+KFIP+V G LA++DQHAADER++LE L+ +V+ G
Sbjct: 831 LVPASITKKALAAARPLRQVDRKFIPLVCGSQLAIMDQHAADERVQLEHLQDQVVGAGGV 890
Query: 1214 SVAY----LDAEQELVLPEIGYQLLQNFAEQIKDWGW------ICNIHTQGSRSFNKNLN 1263
VA L Q L + L F + ++ WGW C I + + +
Sbjct: 891 PVATHSCTLSPPQPLDISAAEQHTLDRFNDILEAWGWHWDIPGACTIESAAAHGGAR--- 947
Query: 1264 LLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAI 1323
+T AV + G L+ V+L FL QL T GS+ PP VLRVL SKAC AI
Sbjct: 948 --------LTHAAV--VLGTPLNGVELQTFLHQLESTGGSAKVPPGVLRVLASKACHSAI 997
Query: 1324 MFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIA 1371
FGD L +C ++E LK T CAHGRPT PLV++ ALH+ IA
Sbjct: 998 RFGDVLDIDQCERLLENLKSTRAWHCCAHGRPTVAPLVDVTALHRVIA 1045
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 141/265 (53%), Gaps = 16/265 (6%)
Query: 92 GIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKGSKCLYLGID-DERKDVGTTV 150
G+ T GFRGEALAS+++ + LEI +KA G + K+++G + L G+ ++R GT V
Sbjct: 4 GLITLGFRGEALASLAEAACLEITSKARGAFETHTKLLQGGRVLKEGLALEQRIKQGTRV 63
Query: 151 VSRDLFYNQPVRRKYM-QSSPKKVLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCS 209
RDLF+N+PVRRK++ + KK + ++ +LR+AL V F F+D D LLC
Sbjct: 64 TVRDLFFNKPVRRKHLIGAGIKKEVDDCREHILRLALPRSNVGFTFVDSMRHDVLLCLKR 123
Query: 210 SSSPLALLISSFGIEDFSFLDEVNA-NDGALEISGYISSPYDSISVKAFQYVYINSRYVC 268
+ +L FG L + A +DG ++ YI +P + + KA QY+Y+N RYV
Sbjct: 124 GRTERDVLPLVFG----QRLVQCGACHDGPIKAELYICNPLEGFASKARQYMYVNGRYVS 179
Query: 269 KGPIHKLLNHLAASF--DCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDP 326
KLLN L D + G L+ PA++ ++ CP L D+T P
Sbjct: 180 GDAASKLLNDLFQQLLQDLNRRGCEQQGRLR-------RFPAFICHISCPPGLPDVTARP 232
Query: 327 LKTHVVFKDWEPVLAFIERAIRSAW 351
KT V F DW PVL+ + A AW
Sbjct: 233 DKTAVQFTDWTPVLSAVRGAAMQAW 257
>gi|353409903|ref|NP_001085796.2| mutL homolog 3 [Xenopus laevis]
Length = 1305
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 203/390 (52%), Gaps = 19/390 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L E VR +RSG + + + VEELV NS+DA +T + V + + ++VVD+G G+
Sbjct: 2 IRCLKEEVRYRLRSGVTINSVGQCVEELVLNSIDALSTCIAVRIDLETVRIQVVDNGCGL 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
++ + LG R+ TSK L D+++ + GFRGEA+ASI++V S++E+ +K
Sbjct: 62 CQEDMDSLGMRY-YTSKCHSLNDLEN---LKFHGFRGEAIASIANVSSIVEVSSKCKNAS 117
Query: 123 NGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+++ K L + D R GTT +LFYN PVRRK M + + ++++ V
Sbjct: 118 KTFYKLIQNGKLLSVQEADTSRPSAGTTFSVYNLFYNLPVRRKCMDQTVE--FENIRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP VSF + +L + + +G+ L E+ ++
Sbjct: 176 ESLSLIHPSVSFSLKNDSMHSVVLQLAKTKDVRSRFCQIYGLPRSQKLCEIQHKVKEFDM 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
GYIS ++ K QY+Y+N R V K +H+L++ L K N
Sbjct: 236 WGYISC--EAHYNKRMQYLYVNKRLVLKTKLHQLIDFLLRKESSICKPKNINVGKSSSPG 293
Query: 302 KSQACP----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
+S++C +++N+ C +S YD+ F+P KT + FKDW+ VL +E R A++K+
Sbjct: 294 RSRSCQELHGIFVINIYCHYSEYDVCFEPAKTLIEFKDWDTVLHCVEEGTR-AFLKR--- 349
Query: 358 DSFDVDML-EDAELPLESSRFQSHQSSTHL 386
+ V+ L EDA ++S+ F S S L
Sbjct: 350 EKLYVEPLKEDALGSVDSNNFISSCSDFQL 379
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 146/331 (44%), Gaps = 72/331 (21%)
Query: 1074 KIESSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSIISGTKWRN----GHPQTTNNNI 1129
K++ STI + T A N +C + + S+ S KW N HP +
Sbjct: 950 KVDGSTICTKDLTTTAVNI---VCNNDNDTESGNLKSLFS--KWENPVYARHPV-----V 999
Query: 1130 SCDI-HNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVA------ 1182
+ D+ Q N L + +H P K + KVLQQVD KFI +
Sbjct: 1000 AVDVSRGQTNTLAVK---IH---NILYPYRFTKEMMHSVKVLQQVDNKFIACLMSTEMKV 1053
Query: 1183 -----GGTLAVIDQHAADERIRLEEL-RHKVLSG----EGK---SVAYLDAEQELVLPEI 1229
G L ++DQHAA ER+RLE+L SG G+ + + EL + E+
Sbjct: 1054 GSEQDGNLLVLVDQHAAHERVRLEQLIADSYESGPEDDAGRRQLKTSIISPPLELNVTEM 1113
Query: 1230 GYQLLQNFAEQIKDWGWICNI-HTQGSRSFNKNLNLLQRQITVITLLAVPCIF------- 1281
Y+LL+ A ++ G + T G+R + + AVP F
Sbjct: 1114 QYRLLRVLARSSQNIGLSLSFPDTPGTR---------------VLVSAVPVCFVEREANE 1158
Query: 1282 ---GVNLSDVDLL-EFLQQLADT-----DGSSTTPPSVLRVLNSKACRGAIMFGDSLLPS 1332
G + +L+ EFLQ+ + S T P +VL+VL S+AC GA+ F D L
Sbjct: 1159 IHRGRSTVAKNLVQEFLQEQVELLQMTGRASGTIPLTVLKVLASQACHGAVKFNDKLSLD 1218
Query: 1333 ECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
+C +++ L + SL FQCAHGRP +PL ++
Sbjct: 1219 DCKHLMQCLSRCSLPFQCAHGRPAILPLADI 1249
>gi|47230202|emb|CAG10616.1| unnamed protein product [Tetraodon nigroviridis]
Length = 359
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 192/356 (53%), Gaps = 23/356 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LP V+ +RSG + L + VEEL+ NS+DA AT V V + + V+V+D+G+G+
Sbjct: 1 IKCLPTEVQGKLRSGVAIPSLQQCVEELILNSIDAEATCVGVRMDLEAFKVQVLDNGTGM 60
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALAS-ISDVSLLEIITKAHGRP 122
D L LG R+ TSK + D+++ + +GFRGEALAS +S +L+E+ ++
Sbjct: 61 DADNLERLGNRY-HTSKCRRVEDLEN---LRWYGFRGEALASLVSLATLVEVSSRTKSSL 116
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQS--SPKKVLHSVKK 179
Y KV K K + ++ R GTTVV + F+N PVRRK ++ ++V H V+
Sbjct: 117 KTYVKVFKDGKGMAVFEAENPRPSAGTTVVICNFFHNMPVRRKRLEPVLEGERVRHRVEA 176
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
I+L+HP VSF + + L+ ++S + + L E+N
Sbjct: 177 ----ISLMHPSVSFTLKNDCTAAMLVQLPKANSIYHRFVQIHSLSRAQNLGEINFTHQQF 232
Query: 240 EISGYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHL----AASFDCSDSWKANN 293
+ GY+ Y++ Q++Y+N R + K +HKL+N L ++ +DS + +
Sbjct: 233 SVVGYVGREGHYNN----CLQFLYVNERLLLKTRVHKLINCLLRKPSSINQKNDSPERSV 288
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
G K KRS+ Y+LN++C +S YD+ +P KT + FKDW+ V+A +E A+++
Sbjct: 289 GSPKHKRSQDLH-GVYILNIKCCYSEYDVCLEPAKTLIEFKDWDGVMACVEEAVKT 343
>gi|149737526|ref|XP_001490730.1| PREDICTED: DNA mismatch repair protein Mlh3 [Equus caballus]
Length = 1453
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 186/362 (51%), Gaps = 24/362 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I RL V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKRLSVEVQAKLRSGLAICSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK L D+++ + +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRY-FTSKCSSLQDLEN---LRFYGFRGEALASIADMASAVEISSKKNKTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L + R GTTV +LFY PVRRK M P+ V++ V
Sbjct: 118 KTFVKLFQNGKALKACEAELSRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+N E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREINFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R + + +HKL++ L S C K NG +
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNRRLILRTKLHKLIDFLLRKESIIC----KPKNGSASRQ 289
Query: 300 -------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
RS + Y++N++C YD+ DP KT + F++W+ L ++ ++ ++
Sbjct: 290 MTSNPRYRSNPELHGIYVINMQCQFCEYDVCMDPAKTLIEFQNWDTPLVCVQEGVK-MFL 348
Query: 353 KK 354
KK
Sbjct: 349 KK 350
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 126/287 (43%), Gaps = 59/287 (20%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
LD+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1157 LDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1216
Query: 1186 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L V +DQHAA ER+RLE+L R K+LS + + E+ + E
Sbjct: 1217 LLVLVDQHAAHERVRLEQLIIDSYEKQQPQGSGRKKLLS------STISPPLEISVTEEQ 1270
Query: 1231 YQLLQNFAEQIKDWGW-ICNIHTQGSRSF---------NKNLNLLQRQITVITLLAVPCI 1280
+LL+ + ++D G I T S + N L+R +T V
Sbjct: 1271 RRLLRCYHNSLEDLGLEILFPDTSDSLVLVGKVPLCFAEREANELRRGRATVTKSIVEEF 1330
Query: 1281 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1340
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E
Sbjct: 1331 IR------EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLEESCRLIEA 1382
Query: 1341 LKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWH 1381
L L FQCAHGRP+ +PL +++ L ++ +A+L ++ WH
Sbjct: 1383 LSWCQLPFQCAHGRPSMLPLADMDHLEQEKQVKPNLARLCRMAQAWH 1429
>gi|124249062|ref|NP_780546.1| DNA mismatch repair protein Mlh3 [Mus musculus]
gi|51259774|gb|AAH79861.1| MutL homolog 3 (E coli) [Mus musculus]
Length = 1411
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 185/354 (52%), Gaps = 19/354 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L + VEEL NS+DA AT V + V + V+V+D+G G+
Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRP 122
+ D + +G R+ TSK + D+++ +GFRGEALASI+D++ +EI +K +
Sbjct: 62 AGDDVEKVGNRY-FTSKCHSVRDLENP---AFYGFRGEALASIADMAGAVEISSKKNTTL 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 118 KTFVKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSM--DPRLEFEKVRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+ E
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEF 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNG 294
SGYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS S+ Y++N++CP YD+ +P KT + F+ W+ VL I+ ++
Sbjct: 294 --PRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQSWDTVLICIQEGVK 345
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 133/309 (43%), Gaps = 75/309 (24%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV-----------AGG 1184
+D+SSG L P K + KVLQQVD KFI + G
Sbjct: 1120 VDVSSGQAESLAVKIHNVLYPYRFTKEMIHSVKVLQQVDNKFIACLMSTRMDEDGRTGGN 1179
Query: 1185 TLAVIDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L ++DQHAA ERIRLE+L R K+LS + + + + E
Sbjct: 1180 LLVLVDQHAAHERIRLEQLITDSYEKQDPQSAGRKKLLS------STIIPPLAITVSEEQ 1233
Query: 1231 YQLLQNFAEQIKDWGW------------------ICNIHTQGSRSFNKNLNLLQRQITVI 1272
+LL+++ + ++D G +C + + S L+R + +
Sbjct: 1234 RRLLRSYHKHLEDLGLELLFPDASDSLILVGKVPLCFVEREASE--------LRRGRSTV 1285
Query: 1273 TLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPS 1332
T V + + +E LQ G T P +V +VL S+AC GAI F D L
Sbjct: 1286 TKSIVEELIR------EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDRLSLE 1337
Query: 1333 ECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRG 1386
E ++E L + L FQCAHGRP+ +PL +L+ L ++ +A+L WH +
Sbjct: 1338 ESCRLIEALSLSQLPFQCAHGRPSMLPLADLDHLEQEKQVKPNLAKLRKMVRAWHLFGKT 1397
Query: 1387 EISLKRASR 1395
E +L++ R
Sbjct: 1398 EQNLQQPIR 1406
>gi|148670913|gb|EDL02860.1| mCG5531, isoform CRA_b [Mus musculus]
Length = 1443
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 185/354 (52%), Gaps = 19/354 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L + VEEL NS+DA AT V + V + V+V+D+G G+
Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRP 122
+ D + +G R+ TSK + D+++ +GFRGEALASI+D++ +EI +K +
Sbjct: 62 AGDDVEKVGNRY-FTSKCHSVRDLENP---AFYGFRGEALASIADMAGAVEISSKKNTTL 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 118 KTFVKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSM--DPRLEFEKVRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+ E
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEF 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNG 294
SGYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS S+ Y++N++CP YD+ +P KT + F+ W+ VL I+ ++
Sbjct: 294 --PRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQSWDTVLICIQEGVK 345
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 133/309 (43%), Gaps = 75/309 (24%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV-----------AGG 1184
+D+SSG L P K + KVLQQVD KFI + G
Sbjct: 1152 VDVSSGQAESLAVKIHNVLYPYRFTKEMIHSVKVLQQVDNKFIACLMSTRMDEDGRTGGN 1211
Query: 1185 TLAVIDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L ++DQHAA ERIRLE+L R K+LS + + + + E
Sbjct: 1212 LLVLVDQHAAHERIRLEQLITDSYEKQDPQSAGRKKLLS------STIIPPLAITVSEEQ 1265
Query: 1231 YQLLQNFAEQIKDWGW------------------ICNIHTQGSRSFNKNLNLLQRQITVI 1272
+LL+++ + ++D G +C + + S L+R + +
Sbjct: 1266 RRLLRSYHKHLEDLGLELLFPDASDSLILVGKVPLCFVEREASE--------LRRGRSTV 1317
Query: 1273 TLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPS 1332
T V + + +E LQ G T P +V +VL S+AC GAI F D L
Sbjct: 1318 TKSIVEELIR------EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDRLSLE 1369
Query: 1333 ECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRG 1386
E ++E L + L FQCAHGRP+ +PL +L+ L ++ +A+L WH +
Sbjct: 1370 ESCRLIEALSLSQLPFQCAHGRPSMLPLADLDHLEQEKQVKPNLAKLRKMVRAWHLFGKT 1429
Query: 1387 EISLKRASR 1395
E +L++ R
Sbjct: 1430 EQNLQQPIR 1438
>gi|126282671|ref|XP_001375015.1| PREDICTED: DNA mismatch repair protein Mlh3 [Monodelphis domestica]
Length = 1453
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 187/354 (52%), Gaps = 16/354 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L E V+ +RSG + L++ +EEL NS+DA A V V + + V+V+D+GSG+
Sbjct: 2 IKCLSEEVQVKLRSGVAIGSLSQCIEELALNSIDADAKCVAVRINMETFKVQVIDNGSGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
RD + +G+++ TSK + D+++ +GFRGEAL+SI+++ S +EI +K +
Sbjct: 62 ERDDIERVGKQY-FTSKCKSVQDLENPK---FYGFRGEALSSIANMASAVEISSKTNRTV 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L + + R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFMKLFQNGKTLEVCEAEVTRPSSGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+ E+
Sbjct: 176 EALSLMHPSISFSLRNDISGSMVLQLPKTKDTCSRFCQIYGLGKSQKLREIKFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC--SDSWKANNGFLK 297
SGYISS ++ K Q++++N R V + +HKL++ L S C S+ + L
Sbjct: 236 SGYISS--EAHYNKNLQFLFVNKRLVLRTRLHKLIDFLLRKESIICRPKGSFASKQMSLS 293
Query: 298 GKRSKS--QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
R +S + Y+LN++C YD+ DP KT + FK+W+ +L + I++
Sbjct: 294 PPRHRSNPELYGIYVLNVKCQFCEYDVCLDPAKTLIEFKNWDTILVCFQEGIKT 347
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 122/273 (44%), Gaps = 48/273 (17%)
Query: 1153 FFIPDSINKSCLEDAKVLQQVDKKFIPVV-----------AGGTLAVIDQHAADERIRLE 1201
P K + +VLQQVD KFI + G L ++DQHAA ERIRLE
Sbjct: 1182 ILYPYRFTKEMVHSMQVLQQVDNKFIACLMSTKQEENGKTGGNLLVLVDQHAAHERIRLE 1241
Query: 1202 EL--------------RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWI 1247
+L R K+LS S Y E+ + E +LL+ + + ++ G
Sbjct: 1242 QLIYDSYEKEQPKSFRRKKLLS----STIY--PPMEVTVTEEQRRLLECYHKGLEGLGLK 1295
Query: 1248 CNIHTQGSRSF----NKNLNLLQRQITVITLLAVPCIFGVNLSDV--DLLEFLQQLADTD 1301
I + S L ++R+ + P + L + + +E LQ
Sbjct: 1296 L-IFPDATSSHVLVEKVPLCFVEREANEVRR-GRPTVTKSMLEEFIREQVELLQTTGGAQ 1353
Query: 1302 GSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV 1361
G T P ++ +VL S+AC GAI F DSL E ++E L Q L FQCAHGRP+ +PL
Sbjct: 1354 G--TLPLAIQKVLASQACHGAIKFNDSLSLRESRRLIEALSQCQLPFQCAHGRPSMLPLA 1411
Query: 1362 NLEALHKQ-------IAQLNNSSELWHGLHRGE 1387
+++ L ++ +A+L + WH + E
Sbjct: 1412 DIDHLEQEKQNPKPNLAKLCRMARAWHLFKKVE 1444
>gi|410962671|ref|XP_003987892.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 1 [Felis catus]
Length = 1459
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 198/396 (50%), Gaps = 29/396 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQARLRSGLAICSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
RD + +G R+ TSK L D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GRDDIDKVGNRY-FTSKCNSLQDLENPR---FYGFRGEALASIADMASAVEISSKKNKTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIKFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R V + +HK ++ L S C K NG +
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKFIDFLLRKESIIC----KPKNGSATRQ 289
Query: 300 -------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
RS + Y++N++C YD+ +P KT + F++W+ VL I+ ++ ++
Sbjct: 290 MNSSPRPRSNPELHGIYVINVQCQFCEYDVCLEPAKTLIEFQNWDTVLVCIQEGVK-MFL 348
Query: 353 KK----IAHDSFDV-DMLEDAELPLESSRFQSHQSS 383
KK + D+ + ED + L S+ Q H SS
Sbjct: 349 KKEKLFVELSGEDIKEFSEDNDFSLFSATLQKHVSS 384
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 131/288 (45%), Gaps = 49/288 (17%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1163 VDVSSGQAKSLAVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1222
Query: 1186 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L V +DQHAA ER+RLE+L R K+LS + + E+ + E
Sbjct: 1223 LLVLVDQHAAHERVRLEQLIVDSYEKQQPQGSGRKKLLS------SIVSPPLEITVTEEQ 1276
Query: 1231 YQLLQNFAEQIKDWGWICNIHTQGSRSF----NKNLNLLQRQITVITLLAVPCIFGVNLS 1286
+LL+ + + ++D G I S S L +QR+ + P +
Sbjct: 1277 SRLLRCYHKNLEDLGLEI-IFPDNSDSLVLVGKVPLCFVQREANELRRGRSPVTKSIVEE 1335
Query: 1287 DV-DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1345
+ + +E LQ G T P +V +VL S+AC GAI F D L P E ++E L
Sbjct: 1336 FIREQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSPEESYRLIEALSWCQ 1393
Query: 1346 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1387
L FQCAHGRP+ +PL +++ L ++ +A+L ++ WH + E
Sbjct: 1394 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLAKLRKMAQAWHLFGKAE 1441
>gi|344274036|ref|XP_003408824.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 1 [Loxodonta
africana]
Length = 1448
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 209/425 (49%), Gaps = 46/425 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSDEVQAKLRSGLAINSLGQCVEELTLNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRY-FTSKCNSVQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALEACEADLTRPSVGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGRSQKLREIKFKYREFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R V + +HKL++ L S C K NG +
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIIC----KPKNGSASRQ 289
Query: 300 -------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
RS + Y++N++C S YD+ +P KT + F++W+ +L I+ +++
Sbjct: 290 MNSCPRHRSNPELHGIYIMNVQCQFSEYDVCMEPAKTLIEFQNWDTLLVCIQEGVKTFLK 349
Query: 353 KK---IAHDSFDV-DMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECER 408
++ + D+ + ED + L + Q H SS ++C++
Sbjct: 350 QEKLFVELSGEDIKEFSEDNDFSLLGTALQKHMSS-------------------DEKCDQ 390
Query: 409 ITFQE 413
++FQE
Sbjct: 391 VSFQE 395
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 123/277 (44%), Gaps = 57/277 (20%)
Query: 1153 FFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGTLAV-IDQHAADERIRLE 1201
P K + +VLQQVD KFI + AGG L V +DQHAA ER+RLE
Sbjct: 1169 ILYPYRFTKEMIHSMQVLQQVDNKFIVCLMSTKTEENGEAGGNLLVLVDQHAAHERVRLE 1228
Query: 1202 EL--------------RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWI 1247
+L R K+LS + + E+ + E +LL + + ++D G +
Sbjct: 1229 QLIIDSYEKQQPQGSGRKKLLS------STISPPLEITVTEEQRRLLWCYHKNLEDLG-L 1281
Query: 1248 CNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQ 1296
I S S + N L+R + +T V + +E LQ
Sbjct: 1282 EFIFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR------EQVELLQA 1335
Query: 1297 LADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
G T P +V +VL S+AC GAI F D L +E ++E L + L FQCAHGRP+
Sbjct: 1336 TGSIQG--TLPLTVQKVLASQACHGAIKFNDGLSLAESHRLIEALSRCQLPFQCAHGRPS 1393
Query: 1357 TVPLVNLEAL--HKQI----AQLNNSSELWHGLHRGE 1387
+PL + + L KQI A+L ++ W + E
Sbjct: 1394 MLPLADTDHLDQEKQIKPNLAKLRKMAQAWSFFGKAE 1430
>gi|410962673|ref|XP_003987893.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 2 [Felis catus]
Length = 1435
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 198/396 (50%), Gaps = 29/396 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQARLRSGLAICSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
RD + +G R+ TSK L D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GRDDIDKVGNRY-FTSKCNSLQDLENPR---FYGFRGEALASIADMASAVEISSKKNKTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIKFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R V + +HK ++ L S C K NG +
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKFIDFLLRKESIIC----KPKNGSATRQ 289
Query: 300 -------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
RS + Y++N++C YD+ +P KT + F++W+ VL I+ ++ ++
Sbjct: 290 MNSSPRPRSNPELHGIYVINVQCQFCEYDVCLEPAKTLIEFQNWDTVLVCIQEGVK-MFL 348
Query: 353 KK----IAHDSFDV-DMLEDAELPLESSRFQSHQSS 383
KK + D+ + ED + L S+ Q H SS
Sbjct: 349 KKEKLFVELSGEDIKEFSEDNDFSLFSATLQKHVSS 384
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 25/264 (9%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1195
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1163 VDVSSGQAKSLAVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1222
Query: 1196 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1254
E+ + + R K+LS + + E+ + E +LL+ + + ++D G I
Sbjct: 1223 EKQQPQGSGRKKLLS------SIVSPPLEITVTEEQSRLLRCYHKNLEDLGLEI-IFPDN 1275
Query: 1255 SRSF----NKNLNLLQRQITVITLLAVPCIFGVNLSDV-DLLEFLQQLADTDGSSTTPPS 1309
S S L +QR+ + P + + + +E LQ G T P +
Sbjct: 1276 SDSLVLVGKVPLCFVQREANELRRGRSPVTKSIVEEFIREQVELLQTTGGIQG--TLPLT 1333
Query: 1310 VLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQ 1369
V +VL S+AC GAI F D L P E ++E L L FQCAHGRP+ +PL +++ L ++
Sbjct: 1334 VQKVLASQACHGAIKFNDGLSPEESYRLIEALSWCQLPFQCAHGRPSMLPLADIDHLEQE 1393
Query: 1370 ------IAQLNNSSELWHGLHRGE 1387
+A+L ++ WH + E
Sbjct: 1394 KQIKPNLAKLRKMAQAWHLFGKAE 1417
>gi|344274038|ref|XP_003408825.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 2 [Loxodonta
africana]
Length = 1424
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 209/428 (48%), Gaps = 52/428 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSDEVQAKLRSGLAINSLGQCVEELTLNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRY-FTSKCNSVQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALEACEADLTRPSVGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGRSQKLREIKFKYREFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R V + +HKL++ L S C K NG
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIIC----KPKNG---SA 286
Query: 300 RSKSQACP----------AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
+ +CP Y++N++C S YD+ +P KT + F++W+ +L I+ +++
Sbjct: 287 SRQMNSCPRHRSNPELHGIYIMNVQCQFSEYDVCMEPAKTLIEFQNWDTLLVCIQEGVKT 346
Query: 350 AWMKK---IAHDSFDV-DMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKE 405
++ + D+ + ED + L + Q H SS ++
Sbjct: 347 FLKQEKLFVELSGEDIKEFSEDNDFSLLGTALQKHMSS-------------------DEK 387
Query: 406 CERITFQE 413
C++++FQE
Sbjct: 388 CDQVSFQE 395
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 33/253 (13%)
Query: 1153 FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLE-ELRHKVLSGE 1211
P K + +VLQQVD KFI + + + E+ + + R K+LS
Sbjct: 1169 ILYPYRFTKEMIHSMQVLQQVDNKFIVCLMSTKTEENGEADSYEKQQPQGSGRKKLLS-- 1226
Query: 1212 GKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSF-----------NK 1260
+ + E+ + E +LL + + ++D G + I S S +
Sbjct: 1227 ----STISPPLEITVTEEQRRLLWCYHKNLEDLG-LEFIFPDTSDSLVLVGKVPLCFVER 1281
Query: 1261 NLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACR 1320
N L+R + +T V + +E LQ G T P +V +VL S+AC
Sbjct: 1282 EANELRRGRSTVTKSIVEEFIR------EQVELLQATGSIQG--TLPLTVQKVLASQACH 1333
Query: 1321 GAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEAL--HKQI----AQLN 1374
GAI F D L +E ++E L + L FQCAHGRP+ +PL + + L KQI A+L
Sbjct: 1334 GAIKFNDGLSLAESHRLIEALSRCQLPFQCAHGRPSMLPLADTDHLDQEKQIKPNLAKLR 1393
Query: 1375 NSSELWHGLHRGE 1387
++ W + E
Sbjct: 1394 KMAQAWSFFGKAE 1406
>gi|432939915|ref|XP_004082626.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Oryzias latipes]
Length = 969
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 197/382 (51%), Gaps = 25/382 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LP V+ +RSG + L + VEELV NS+DAGAT V V + + V+V+D+G+G+
Sbjct: 15 IKLLPPEVQGQLRSGVAIPSLQQCVEELVLNSIDAGATCVGVRMDLEAFKVQVIDNGAGM 74
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASI-SDVSLLEIITKAHGRP 122
+ + + +G R+ TSK G L D+D+ + + GFRGEALASI S +L+EI +++
Sbjct: 75 NTENMQRVGNRY-HTSKCGSLEDLDN---VKSHGFRGEALASIVSMATLVEISSRSRASA 130
Query: 123 NGYRKVMK-GSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQS--SPKKVLHSVKK 179
K+ K G + R GTTV+ + F+N PVRR+ + + ++V H V+
Sbjct: 131 KTLVKLFKDGRGVDVFEAETVRPSAGTTVIVCNFFHNMPVRRRRLDAVLEGERVRHRVEA 190
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
++L++P VSF + + ++ + S + G+ L E+ +
Sbjct: 191 ----VSLMNPSVSFTLKNDSTGAMMVQLPKAKSTYHRFVQIHGLTRAEKLGEICYSHKQF 246
Query: 240 EISGYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
E GY+ Y++ + Q++Y+N R + K IHKLLN L +K
Sbjct: 247 EAVGYLGKEGHYNN----SLQFLYVNERLLLKTRIHKLLNLLLRRLKQKPDPSDGPSVIK 302
Query: 298 GKRSKS--QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
++K + Y+LN++C +S YD+ F+P KT + F+DW+ VL +E A+R+ ++
Sbjct: 303 SPKNKQSHELFGVYILNIKCSYSEYDICFEPTKTLIEFRDWDEVLLCVEEAVRAFLRREN 362
Query: 356 AHDSFDVDMLEDAELPLESSRF 377
F + +L ESSR
Sbjct: 363 LMSEFSQE-----DLDCESSRV 379
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 125/280 (44%), Gaps = 44/280 (15%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVA------------- 1182
+DIS G L+ +P ++K+ + KV+ QVDKKF+ +
Sbjct: 691 VDISGGQVDGLVVKIHSVLVPYRLSKAMIHSMKVVDQVDKKFLACLINTREEELASDGDT 750
Query: 1183 -GGTLAVIDQHAADERIRLEEL-------RHKVLSGEGKSVAYLDAEQELVLPEIGYQLL 1234
G L ++DQHAA ER+RLE L ++ + + + E+ + E +LL
Sbjct: 751 EGNLLVLVDQHAAHERVRLENLITDSYEDNPEIFGEKWLCSSTIVPPLEISVTEEELRLL 810
Query: 1235 QNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSDVDLL 1291
+ Q++ G + TQ F + L L+++ + P I +
Sbjct: 811 SSCRSQLRSLGLEVTFSETQRPSIFVGKVPLCFLEKETNELKR-GRPSIIKTIVE----- 864
Query: 1292 EFLQQ-----LADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
E+LQ+ L+ T P +VL+VL S AC GA+ F D+L EC +V L L
Sbjct: 865 EYLQEQIELLLSTGRVKRTLPITVLKVLASLACHGAVKFNDTLNRDECHSLVASLSSCQL 924
Query: 1347 CFQCAHGRPTTVPLVNLEALHKQ-----IAQLNNSSELWH 1381
FQCAHGRP+ PLV++ L ++ + +L E W
Sbjct: 925 PFQCAHGRPSIAPLVDIRHLDEESKKPNLKKLRRMYEAWQ 964
>gi|74205421|dbj|BAE21026.1| unnamed protein product [Mus musculus]
Length = 1411
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 184/354 (51%), Gaps = 19/354 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L + VEEL NS+DA T V + V + V+V+D+G G+
Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEVTCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRP 122
+ D + +G R+ TSK + D+++ +GFRGEALASI+D++ +EI +K +
Sbjct: 62 AGDDVEKVGNRY-FTSKCHSVRDLENP---AFYGFRGEALASIADMAGAVEISSKKNTTL 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 118 KTFVKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSM--DPRLEFEKVRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+ E
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEF 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNG 294
SGYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS S+ Y++N++CP YD+ +P KT + F+ W+ VL I+ ++
Sbjct: 294 --PRHRSASEPHGIYVINVQCPFCEYDVCIEPAKTLIEFQSWDTVLICIQEGVK 345
Score = 96.7 bits (239), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 126/289 (43%), Gaps = 71/289 (24%)
Query: 1156 PDSINKSCLEDAKVLQQVDKKFIPVV-----------AGGTLAVIDQHAADERIRLEEL- 1203
P K + KVLQQVD KFI + G L ++DQHAA ERIRLE+L
Sbjct: 1140 PYRFTKEMIHSVKVLQQVDNKFIACLMSTRMDEDGRTGGNLLVLVDQHAAHERIRLEQLI 1199
Query: 1204 -------------RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGW---- 1246
R K+LS + + + + E +LL+++ + ++D G
Sbjct: 1200 TDSYEKQDPQSAGRKKLLS------STIIPPLAITVSEEQRRLLRSYHKHLEDLGLELLF 1253
Query: 1247 --------------ICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLE 1292
+C + + S L+R + +T V + + +E
Sbjct: 1254 PDASDSLILVGKVPLCFVEREASE--------LRRGRSTVTKSIVEELIR------EQVE 1299
Query: 1293 FLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAH 1352
LQ G T P +V +VL S+AC GAI F D L E ++E L + L FQCAH
Sbjct: 1300 LLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDRLSLEESCRLIEALSLSQLPFQCAH 1357
Query: 1353 GRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRASR 1395
GRP+ +PL +L+ L ++ +A+L WH + E +L++ R
Sbjct: 1358 GRPSMLPLADLDHLEQEKQVKPNLAKLRKMVRAWHLFGKTEQNLQQPIR 1406
>gi|354481250|ref|XP_003502815.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Cricetulus
griseus]
Length = 1447
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 211/421 (50%), Gaps = 38/421 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L++ VEEL+ NS+DA A V + V + V+V+D+G G+
Sbjct: 2 IKCLSDEVQAKLRSGLAIISLSQCVEELILNSIDAEAKCVAIRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
+ D + +G R+ TSK + D++++ +GFRGEALASI D+ S +EI++K +
Sbjct: 62 AGDDVEKVGNRY-FTSKCNSIQDLENSK---FYGFRGEALASIVDMASTVEILSKKNTTM 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L + D R VGTTV +LF PVRRK M P+ V++ V
Sbjct: 118 KTFVKMFQNGKALNVCEADLTRPSVGTTVTVYNLFSQFPVRRKSM--DPRLEFEKVRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
I+L+HP +SF + S +L + + +G+ L E++ E
Sbjct: 176 EAISLMHPSISFSLRNDVSGAMVLQLPKTKDICSRFCQIYGLGKSQKLREIHFKYKEFEF 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGY+SS ++ K Q++++N R V + +HKL++ L S C + + +
Sbjct: 236 SGYVSS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRHMNSS 293
Query: 300 ---RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-RSAWMKKI 355
RS S+ Y++N++C YD+ +P KT + F++W+ +L I+ + R +K+
Sbjct: 294 PRHRSASELHGIYVINVQCQFCDYDVCMEPAKTLIEFQNWDTLLICIQEGVKRFLKQEKL 353
Query: 356 AHDSFDVDMLE---DAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQ 412
+ D+ E D + L + Q+H S+ H+ CE+ +FQ
Sbjct: 354 FVELSGEDIKEFNDDNDFSLLGATLQTHVST-------------------HEMCEQSSFQ 394
Query: 413 E 413
E
Sbjct: 395 E 395
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 132/288 (45%), Gaps = 49/288 (17%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1151 VDVSSGRAESLAVKIHNVLYPYRFTKEMVHSMQVLQQVDNKFIACLMSTKMEENGKAGGN 1210
Query: 1186 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L V +DQHAA ER+RLE+L R K+LS + + + +P+
Sbjct: 1211 LLVLVDQHAAHERVRLEQLISDSYEKQPPQSSGRKKLLS------SMIIPPLAITVPKEQ 1264
Query: 1231 YQLLQNFAEQIKDWGWICNIHTQGSRSF----NKNLNLLQRQITVITLLAVPCIFGVNLS 1286
+LL ++ + ++D G I S S L ++R+ + L C ++
Sbjct: 1265 RRLLWSYHKHLEDLGLEL-IFPDASDSLILVGKVPLCFVEREAS--ELRRGRCTVTKSIV 1321
Query: 1287 DVDLLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1345
+ + E ++ L T G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1322 EEFIREQVELLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDCLSLEESYRLIEALSLCQ 1381
Query: 1346 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1387
L FQCAHGRP+ +PL +L+ L ++ IA+L + WH + E
Sbjct: 1382 LPFQCAHGRPSMLPLADLDHLEQEKQVKPNIAKLRKMARAWHLFGKAE 1429
>gi|355677887|ref|ZP_09060654.1| hypothetical protein HMPREF9469_03691 [Clostridium citroniae
WAL-17108]
gi|354812973|gb|EHE97587.1| hypothetical protein HMPREF9469_03691 [Clostridium citroniae
WAL-17108]
Length = 679
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 177/355 (49%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L ++ N + +G V+ VV+EL+ N++DA AT V + + C V+V D+
Sbjct: 1 MANITVLDQSTINKIAAGEVIERPASVVKELLENAIDAQATAVTIEIKDGGCSMVRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI RD + L RHA TSK+ + D+ + + GFRGEALASI+ V+ +E+I+K
Sbjct: 61 GCGIPRDQIALAFLRHA-TSKIRSVEDL---FTVSSLGFRGEALASIAAVAQVELISKTS 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R ++G G+++ GTT+++R+LFYN P R+K++++ + H V
Sbjct: 117 DSLTGSRYQIEGGA--ERGLEEIGAPEGTTIIARNLFYNTPARKKFLKTPMTEGAH-VAA 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +IAL HP +S +FI ++ L T + + L+ + FG E S L VNA +G +
Sbjct: 174 VVEKIALSHPDISIRFI--QNNQNKLYTSGNHNLKDLIYTVFGREITSNLLAVNAQEGDI 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++SG+I P + S + ++ +IN RY+ I K + F +
Sbjct: 232 QVSGFIGKPVIARSNRNYENYFINGRYIRSSVISKAIEEAYKPFMMQHKY---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P +L+ D+ P K + F D E V + +A+ A K
Sbjct: 282 -------PFTMLHFTIQQDTLDVNVHPTKMELRFSDGEAVYRAVVKAVADALAHK 329
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 20/180 (11%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L +IDQHAA E++ L E K L ++ L L LL + G
Sbjct: 510 LFIIDQHAAHEKV-LYEKTIKTLKTRQYDTQMVEPPIILTLNMNEEVLLSRYMSYFTGMG 568
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLSDVDLLEFLQQLADTDGSS 1304
+ I G R + + VP +F + ++ L+E + L+D D S
Sbjct: 569 F--EIEPFGGREY--------------AVRGVPANLFSIAQKEL-LIEMIDGLSD-DISV 610
Query: 1305 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
P + + S +C+ A+ SL +E ++++L Q + C HGRPT + + E
Sbjct: 611 HNPDIIYERVASMSCKAAVKGHHSLSAAEANELIDQLLQLDNPYACPHGRPTIISMTKYE 670
>gi|344246687|gb|EGW02791.1| DNA mismatch repair protein Mlh3 [Cricetulus griseus]
Length = 1533
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 211/423 (49%), Gaps = 38/423 (8%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGS 61
I L + V+ +RSG + L++ VEEL+ NS+DA A V + V + V+V+D+G
Sbjct: 143 AMIKCLSDEVQAKLRSGLAIISLSQCVEELILNSIDAEAKCVAIRVNMETFQVQVIDNGF 202
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHG 120
G++ D + +G R+ TSK + D++++ +GFRGEALASI D+ S +EI++K +
Sbjct: 203 GMAGDDVEKVGNRY-FTSKCNSIQDLENSK---FYGFRGEALASIVDMASTVEILSKKNT 258
Query: 121 RPNGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ K+ + K L + D R VGTTV +LF PVRRK M P+ V++
Sbjct: 259 TMKTFVKMFQNGKALNVCEADLTRPSVGTTVTVYNLFSQFPVRRKSM--DPRLEFEKVRQ 316
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V I+L+HP +SF + S +L + + +G+ L E++
Sbjct: 317 RVEAISLMHPSISFSLRNDVSGAMVLQLPKTKDICSRFCQIYGLGKSQKLREIHFKYKEF 376
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLK 297
E SGY+SS ++ K Q++++N R V + +HKL++ L S C + + +
Sbjct: 377 EFSGYVSS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRHMN 434
Query: 298 GK---RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-RSAWMK 353
RS S+ Y++N++C YD+ +P KT + F++W+ +L I+ + R +
Sbjct: 435 SSPRHRSASELHGIYVINVQCQFCDYDVCMEPAKTLIEFQNWDTLLICIQEGVKRFLKQE 494
Query: 354 KIAHDSFDVDMLE---DAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERIT 410
K+ + D+ E D + L + Q+H S+ H+ CE+ +
Sbjct: 495 KLFVELSGEDIKEFNDDNDFSLLGATLQTHVST-------------------HEMCEQSS 535
Query: 411 FQE 413
FQE
Sbjct: 536 FQE 538
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 25/264 (9%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1195
+D+SSG L P K + +VLQQVD KFI + + + +
Sbjct: 1261 VDVSSGRAESLAVKIHNVLYPYRFTKEMVHSMQVLQQVDNKFIACLMSTKMEENGKADSY 1320
Query: 1196 ERIRLEEL-RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1254
E+ + R K+LS + + + +P+ +LL ++ + ++D G I
Sbjct: 1321 EKQPPQSSGRKKLLS------SMIIPPLAITVPKEQRRLLWSYHKHLEDLGLEL-IFPDA 1373
Query: 1255 SRSF----NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG-SSTTPPS 1309
S S L ++R+ + L C ++ + + E ++ L T G T P +
Sbjct: 1374 SDSLILVGKVPLCFVEREAS--ELRRGRCTVTKSIVEEFIREQVELLQTTGGIQGTLPLT 1431
Query: 1310 VLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQ 1369
V +VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL +L+ L ++
Sbjct: 1432 VQKVLASQACHGAIKFNDCLSLEESYRLIEALSLCQLPFQCAHGRPSMLPLADLDHLEQE 1491
Query: 1370 ------IAQLNNSSELWHGLHRGE 1387
IA+L + WH + E
Sbjct: 1492 KQVKPNIAKLRKMARAWHLFGKAE 1515
>gi|326920823|ref|XP_003206667.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Meleagris
gallopavo]
Length = 1234
Score = 157 bits (396), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 187/358 (52%), Gaps = 26/358 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L E V+ +RSG + L + VEELVFNS+DA AT V V V + ++VVD+GSG+
Sbjct: 2 IKHLAEDVQARLRSGVAVTSLGQCVEELVFNSIDAKATCVAVRVDLEAFKIQVVDNGSGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR-P 122
R+ L +G+R+ TSK +AD++ T +GFRGEALASI++++ + ++ +
Sbjct: 62 GREDLSKMGKRY-FTSKCSSVADLEKLT---FYGFRGEALASIANMASVVEVSSKSSKTA 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ L + + R GTTV +LF+ PVRR+ M P V++ V
Sbjct: 118 KTFVKLFHNGHALEVCEAELSRPSGGTTVTVCNLFHQLPVRRRCM--DPVLEFERVRQKV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
I+L+HP VS + S +L + + +G+ L E+ G EI
Sbjct: 176 EAISLMHPSVSLSLRNDISCSMVLQLPKTRDVYSRFCQIYGLGRSQKLREIKHKSGGFEI 235
Query: 242 SGYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHL---------AASFDCSDSWK 290
SGYIS+ Y+ K Q++Y+N R V K +HKL++ L A S S
Sbjct: 236 SGYISTEGHYN----KNMQFLYVNRRLVLKTRLHKLIDFLLRKESVICKAKSVPVSRQGS 291
Query: 291 ANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
++ G L R + ++LN+ C +S YD++ +P KT + F++W+ +LA +E ++
Sbjct: 292 SSPGRL---RCGPELYGIFVLNVTCAYSEYDVSLEPAKTLIEFQNWDVLLACVEEGVK 346
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 116/262 (44%), Gaps = 51/262 (19%)
Query: 1153 FFIPDSINKSCLEDAKVLQQVDKKFIPVV-----------AGGTLAVIDQHAADERIRLE 1201
P K + +VLQQVD KFI V G L ++DQHAA ERIRLE
Sbjct: 970 ILYPYRFTKDMIHSMQVLQQVDNKFIACVINTRNEMDKKEGGNLLVLVDQHAAHERIRLE 1029
Query: 1202 ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKN 1261
+L E + V P + ++ E+ + W C KN
Sbjct: 1030 QLIADSYEKEAAACGKKKFLSSSVSPPLEIEV----TEEQRRILWCCY----------KN 1075
Query: 1262 LNLLQRQIT------VITLLAVPCIFG-------------VNLSDVDLLEFLQQ---LAD 1299
L L +++ +I + VP F VN S V+ EF+++ L
Sbjct: 1076 LKDLGLELSFPEINNLILVKKVPLCFTEREANELRRKRQPVNKSIVE--EFIKEQVELVQ 1133
Query: 1300 TDGSS--TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT 1357
T G + T P + L+VL S+AC GAI F DSL E ++E L L FQCAHGRP+
Sbjct: 1134 TTGGARGTMPLTFLKVLASQACHGAIKFNDSLTSEESCRLMEALSSCQLPFQCAHGRPSM 1193
Query: 1358 VPLVNLEALHKQIAQLNNSSEL 1379
+PL +++ L +++ N + L
Sbjct: 1194 MPLADIDHLQQEMQPKPNLARL 1215
>gi|26330996|dbj|BAC29228.1| unnamed protein product [Mus musculus]
Length = 434
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 185/354 (52%), Gaps = 19/354 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L + VEEL NS+DA AT V + V + V+V+D+G G+
Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRP 122
+ D + +G R+ TSK + D+++ +GFRGEALASI+D++ +EI +K +
Sbjct: 62 AGDDVEKVGNRY-FTSKCHSVRDLENP---AFYGFRGEALASIADMAGAVEISSKKNTTL 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 118 KTFVKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSM--DPRLEFEKVRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+ E
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEF 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNG 294
SGYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS S+ Y++N++CP YD+ +P KT + F+ W+ VL I+ ++
Sbjct: 294 --PRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQSWDTVLICIQEGVK 345
>gi|73963657|ref|XP_537511.2| PREDICTED: DNA mismatch repair protein Mlh3 isoform 1 [Canis lupus
familiaris]
Length = 1456
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 196/384 (51%), Gaps = 25/384 (6%)
Query: 11 VRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVL 70
V+ +RSG + L + VEELV NS+DA A V V V + V+V+D+G G+ D +
Sbjct: 9 VQARLRSGLAICSLGQCVEELVLNSIDAEAKCVAVRVNMETFQVQVIDNGFGMGSDDIDK 68
Query: 71 LGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPNGYRKVM 129
+G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K + + K+
Sbjct: 69 VGNRY-FTSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTMKTFVKLF 124
Query: 130 KGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVH 188
+ K L + R GTTV +LFY PVRRK M P+ V++ + ++L+H
Sbjct: 125 QNGKALKACEANLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIEALSLMH 182
Query: 189 PKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISSP 248
P +SF + S +L + + +G+ L E+ E+SGYISS
Sbjct: 183 PSISFSLRNDVSGSMVLQVPKTKDVCSRFCQIYGLGKSQKLREIKFKYKEFELSGYISS- 241
Query: 249 YDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGFLKGKRS 301
++ K Q++++N R V + +HK ++ L S C S S + N+ R+
Sbjct: 242 -EAHYNKNMQFLFVNKRLVLRTKLHKFIDFLLRRESIICKPKNGSSSRQVNSS--PRHRA 298
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK----IAH 357
+ Y++N++C YD+ +P KT + F+DW+ VL I+ A++ ++KK +
Sbjct: 299 NPELHGIYVINMQCQFCEYDVCMEPAKTLIEFQDWDTVLVCIQEAVK-MFLKKEKLFMEL 357
Query: 358 DSFDV-DMLEDAELPLESSRFQSH 380
D+ + ED + L S+ Q H
Sbjct: 358 SGEDIKEFSEDNDFSLFSATLQKH 381
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 134/287 (46%), Gaps = 47/287 (16%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L+ P K + +VLQQVD KFI + AGG
Sbjct: 1160 VDVSSGQAKSLVVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1219
Query: 1186 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L V +DQHAA ER+RLE+L R K+LS + + ++ + E
Sbjct: 1220 LLVLVDQHAAHERVRLEQLITDSYEKQQPQGSGRKKLLS------STVSPPLKIRVTEEQ 1273
Query: 1231 YQLLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSD 1287
+LL+ + + ++D G I T S + L ++R+ + P N+ +
Sbjct: 1274 RRLLRCYHKNLEDLGLEILFPDTNDSLVLVGKVPLCFIEREANELRRGRSP--VTRNIVE 1331
Query: 1288 VDLLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
+ E ++ L T G T P +V +VL S+AC GAI F D L E ++E L L
Sbjct: 1332 EFIREQVELLQTTGGIQRTLPLTVQKVLASQACHGAIKFNDGLSREESCRLIEALSWCQL 1391
Query: 1347 CFQCAHGRPTTVPLVNLEAL--HKQI----AQLNNSSELWHGLHRGE 1387
FQCAHGRP+ +PL +++ L KQI A+L ++ WH + E
Sbjct: 1392 PFQCAHGRPSMLPLADIDHLGQEKQIKPNLAKLRKMAQAWHLFGKAE 1438
>gi|395503885|ref|XP_003756292.1| PREDICTED: DNA mismatch repair protein Mlh3 [Sarcophilus harrisii]
Length = 1436
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 182/353 (51%), Gaps = 16/353 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L E V+ +RSG + +++ VEEL NS+DA A V V V + V+V+D+GSGI
Sbjct: 2 IKCLSEEVQVKLRSGVAVSSISQCVEELALNSIDAEAKCVAVRVNMETFKVQVIDNGSGI 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
RD + +G+++ TSK + D+++ +GFRGEAL+SI ++ S +EI +K +
Sbjct: 62 ERDDVERVGKQY-FTSKCKSVQDLENP---KFYGFRGEALSSIVNMASAVEIASKTNKTV 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L + R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 ETFVKLFQNGKALETCEAELTRPSSGTTVTIFNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + G+ L E+N E+
Sbjct: 176 EALSLMHPSISFSLRNDISGSMVLQLPKTKDTCSRFCQIHGLGKSQKLREINFKHKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGF 295
+GYIS ++ K Q++++N R V + +HKL++ L S C + K
Sbjct: 236 NGYISC--EAHYNKNLQFLFVNKRLVLRTRLHKLIDFLLRKESIICRPKGGPASKQMTSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS S+ Y++N++C YD+ DP KT + F++W+ VL I+ I+
Sbjct: 294 PPRHRSNSELHGIYVINVKCQFCEYDVCLDPAKTLIEFRNWDTVLVCIQEGIK 346
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 115/270 (42%), Gaps = 53/270 (19%)
Query: 1153 FFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGTLAV-IDQHAADERIRLE 1201
P K + +VLQQVD KFI + AGG L V +DQHAA ERIRLE
Sbjct: 1176 ILYPYRFTKEMVHSMQVLQQVDNKFIACLMSTKQEENGKAGGNLLVLVDQHAAHERIRLE 1235
Query: 1202 EL--------------RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWI 1247
+L R K+LS S Y ++ + E +LLQ + + ++D G
Sbjct: 1236 QLICDSYEKEQPKSFHRKKLLS----STIY--PPMKVTVTEEQRRLLQCYHKALEDLGLK 1289
Query: 1248 CNIHTQGSRSF---NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSS 1304
S L ++R+ + P + L + LL F Q AD D
Sbjct: 1290 LIFPDPPSSHILVGEVPLCFVEREANEVRR-GRPTVTKSILEKI-LLMFSQ--ADRDN-- 1343
Query: 1305 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
V + + GAI F DSL E ++E L L FQCAHGRP+ +PL ++
Sbjct: 1344 ------FFVDSEENWNGAIKFNDSLSLEESCRLIEALSWCQLPFQCAHGRPSMLPLADIN 1397
Query: 1365 ALHKQ-------IAQLNNSSELWHGLHRGE 1387
L ++ +A+L ++ WH + E
Sbjct: 1398 HLEQEKQNSKPNLAKLCKMAQAWHLFKKAE 1427
>gi|224084115|ref|XP_002307216.1| predicted protein [Populus trichocarpa]
gi|222856665|gb|EEE94212.1| predicted protein [Populus trichocarpa]
Length = 123
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/100 (74%), Positives = 86/100 (86%)
Query: 1126 NNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGT 1185
N+N S ++ +Q NILDISSG LHL G +P+SI+K CL+DA+VL QVDKKFIP+VAGGT
Sbjct: 1 NHNTSSNVGSQRNILDISSGFLHLAGNLLVPESIHKKCLQDARVLHQVDKKFIPIVAGGT 60
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV 1225
LAVIDQHAADERIRLEELR KVLSGE K+V YLDAEQEL+
Sbjct: 61 LAVIDQHAADERIRLEELRQKVLSGEEKTVTYLDAEQELL 100
Score = 46.6 bits (109), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 22/24 (91%)
Query: 1297 LADTDGSSTTPPSVLRVLNSKACR 1320
L+DTDGSST PPSVLRVLN KACR
Sbjct: 100 LSDTDGSSTLPPSVLRVLNYKACR 123
>gi|73963653|ref|XP_868119.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 3 [Canis lupus
familiaris]
Length = 1432
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 196/384 (51%), Gaps = 25/384 (6%)
Query: 11 VRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVL 70
V+ +RSG + L + VEELV NS+DA A V V V + V+V+D+G G+ D +
Sbjct: 9 VQARLRSGLAICSLGQCVEELVLNSIDAEAKCVAVRVNMETFQVQVIDNGFGMGSDDIDK 68
Query: 71 LGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPNGYRKVM 129
+G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K + + K+
Sbjct: 69 VGNRY-FTSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTMKTFVKLF 124
Query: 130 KGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVH 188
+ K L + R GTTV +LFY PVRRK M P+ V++ + ++L+H
Sbjct: 125 QNGKALKACEANLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIEALSLMH 182
Query: 189 PKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISSP 248
P +SF + S +L + + +G+ L E+ E+SGYISS
Sbjct: 183 PSISFSLRNDVSGSMVLQVPKTKDVCSRFCQIYGLGKSQKLREIKFKYKEFELSGYISS- 241
Query: 249 YDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGFLKGKRS 301
++ K Q++++N R V + +HK ++ L S C S S + N+ R+
Sbjct: 242 -EAHYNKNMQFLFVNKRLVLRTKLHKFIDFLLRRESIICKPKNGSSSRQVNSS--PRHRA 298
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK----IAH 357
+ Y++N++C YD+ +P KT + F+DW+ VL I+ A++ ++KK +
Sbjct: 299 NPELHGIYVINMQCQFCEYDVCMEPAKTLIEFQDWDTVLVCIQEAVK-MFLKKEKLFMEL 357
Query: 358 DSFDV-DMLEDAELPLESSRFQSH 380
D+ + ED + L S+ Q H
Sbjct: 358 SGEDIKEFSEDNDFSLFSATLQKH 381
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 121/263 (46%), Gaps = 23/263 (8%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1195
+D+SSG L+ P K + +VLQQVD KFI + + +
Sbjct: 1160 VDVSSGQAKSLVVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1219
Query: 1196 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGW-ICNIHTQ 1253
E+ + + R K+LS + + ++ + E +LL+ + + ++D G I T
Sbjct: 1220 EKQQPQGSGRKKLLS------STVSPPLKIRVTEEQRRLLRCYHKNLEDLGLEILFPDTN 1273
Query: 1254 GSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG-SSTTPPSV 1310
S + L ++R+ + P N+ + + E ++ L T G T P +V
Sbjct: 1274 DSLVLVGKVPLCFIEREANELRRGRSP--VTRNIVEEFIREQVELLQTTGGIQRTLPLTV 1331
Query: 1311 LRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEAL--HK 1368
+VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL +++ L K
Sbjct: 1332 QKVLASQACHGAIKFNDGLSREESCRLIEALSWCQLPFQCAHGRPSMLPLADIDHLGQEK 1391
Query: 1369 QI----AQLNNSSELWHGLHRGE 1387
QI A+L ++ WH + E
Sbjct: 1392 QIKPNLAKLRKMAQAWHLFGKAE 1414
>gi|163814089|ref|ZP_02205481.1| hypothetical protein COPEUT_00242 [Coprococcus eutactus ATCC 27759]
gi|158450538|gb|EDP27533.1| DNA mismatch repair domain protein [Coprococcus eutactus ATCC
27759]
Length = 702
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 181/352 (51%), Gaps = 27/352 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I L + N + +G V+ + V++ELV NS+D+GAT + V V G +++V D+GSG
Sbjct: 2 IKVLDQNTINKIAAGEVIEKPSSVIKELVENSIDSGATAITVEVKGSGLSFLRVTDNGSG 61
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D + L RHA TSKL ++D I + GFRGEALASI+ V+ +E+ITK
Sbjct: 62 IKKDEVKLAFLRHA-TSKL---VTVEDLLSISSLGFRGEALASIASVAQVEMITKTADDV 117
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G R + G + + ++ GTT++ R+LFYN P R+K+M++ ++ + + +
Sbjct: 118 TGLRYQIHGGR--EISSEEIGAPGGTTIIVRNLFYNTPARKKFMKTDLTEISY-IYDLMC 174
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI + HPK+SFKFI ++ L T + ++ +G + S L E+NA + ++IS
Sbjct: 175 RICMSHPKISFKFISNGTDK--LFTSGNGKLRDIIYHIYGRDITSNLLEINAENDYMKIS 232
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GYI+ P S ++F+ Y+N RY+ + K + +F +
Sbjct: 233 GYIARPCISRGNRSFEGYYVNHRYIKSAVLTKAIEDAFRTFVMIHKF------------- 279
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P +N + L D+ P K + F + + + +F AIR + K
Sbjct: 280 ----PFTEINFQVRPDLLDVNVHPTKMELKFANSQDIYSFTYNAIRETLLFK 327
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 24/200 (12%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
+++ Q+ K + + G ++DQHAA E+++ EEL + + S YL + L
Sbjct: 515 RLIGQLFKTYWLIEYDGKFFIMDQHAAHEKVKYEELMENYKNKKIYS-QYLMPPAVVTLS 573
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLS 1286
+ L E + G+ I G R F N AVP +FG++
Sbjct: 574 ATEIEFLHENMETFEALGY--QIENFGGREFKLN--------------AVPDNLFGLDGR 617
Query: 1287 DVDLLEFLQQLADTDGSS--TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1344
++ F+ +AD S+ T + L++ AC+ AI + E ++++L +
Sbjct: 618 EL----FIDFIADASSSAKKVTIDVFIHKLSTMACKAAIKGNTEISFKEADALIDQLLKL 673
Query: 1345 SLCFQCAHGRPTTVPLVNLE 1364
+ C HGRPT + + E
Sbjct: 674 ENPYTCPHGRPTVISMTEAE 693
>gi|358414255|ref|XP_003582790.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3
[Bos taurus]
gi|359069767|ref|XP_003586644.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3
[Bos taurus]
Length = 1460
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 199/393 (50%), Gaps = 23/393 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSAEVQARLRSGLAVCSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRY-FTSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSKKNKSM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+N E+
Sbjct: 176 EALSLMHPTISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREINFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNG 294
+G+ISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 236 TGFISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQVNSN 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
RS + Y++N++C YD+ +P KT + F++W+ +L I+ +++ K+
Sbjct: 294 --PRPRSNPELHGIYVINVQCQFCEYDVCLEPAKTLIEFQNWDTLLICIQEGVKTFLKKE 351
Query: 355 ---IAHDSFDV-DMLEDAELPLESSRFQSHQSS 383
+ S D+ + ED + L S+ Q SS
Sbjct: 352 KLFVELSSEDIKEFSEDNDFSLFSASLQKQVSS 384
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 1186 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L V +DQHAA ERIRLE+L R K+LS + + E+ + E
Sbjct: 1218 LLVLVDQHAAHERIRLEQLIIDSYEKQQPQGFGRKKLLS------SIVSPPLEITVTEEQ 1271
Query: 1231 YQLLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSD 1287
+LL+ + + ++D G I T S + L ++R+ + + G+
Sbjct: 1272 RRLLRCYHKNLEDLGLEIVFPDTSDSLVLIGKVPLCFVEREASELRRGRSTVTKGIVEEF 1331
Query: 1288 V-DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
+ + +E LQ G T P +V +VL S+AC GAI F D L E ++E L L
Sbjct: 1332 IREQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSFEESCRLIEALSWCQL 1389
Query: 1347 CFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWH 1381
FQCAHGRP+ +PL N++ L ++ +A+L ++ WH
Sbjct: 1390 PFQCAHGRPSMLPLANIDHLEQEKQTKPNLAKLRRMAQAWH 1430
>gi|269316183|ref|XP_638891.4| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4]
gi|256012918|gb|EAL65556.2| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4]
Length = 1658
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 192/389 (49%), Gaps = 45/389 (11%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRD 66
L E V VRS V+ L + +EE++FNS+DA AT + + + + N +V D+G G+S +
Sbjct: 28 LKEEVSLKVRSSVVIVSLEQAIEEIIFNSIDARATVISISINLSNLSFEVKDNGFGLSYE 87
Query: 67 GLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYR 126
L +G+R+ TSK+ L+D+ + TFG+RGE+LAS+S++S L+II+ + G + +
Sbjct: 88 NLKFVGDRNC-TSKINSLSDL---KSLKTFGYRGESLASLSNISSLDIISNSFG--STIQ 141
Query: 127 KVMKGSKCLYLGIDDERKDV------------------------GTTVVSRDLFYNQPVR 162
K + K I D GT V RDLF N PVR
Sbjct: 142 KSISFGKVDQFKILDNNNSSSCDNNNNNVNNNNINNNNNNSIANGTIVKIRDLFKNYPVR 201
Query: 163 RKYMQSSPKKVLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG 222
R+ + K++ +KK + IAL PK+ F D +L T +S L+ +G
Sbjct: 202 RQGLYHPNLKLI--IKKRIEIIALSFPKIVFSVYDETKSLTILKTPKDTSFLSYFKHFYG 259
Query: 223 IEDFSFLDEVNANDGALE---------ISGYISSPYDS-ISVKAFQYVYINSRYVCKGPI 272
E + L+ V + + +SGY+SSP+ K+FQY+Y+N+R V +
Sbjct: 260 QEMMNKLEYVTSENYNNTTNNNSSSYYLSGYLSSPHKKGHPNKSFQYIYLNNRIVLNTKL 319
Query: 273 HKLLNHLAASFDC-SDSWKANNGFLK-GKRSKSQACPAYLLNLRCPHSLYDLTFDP-LKT 329
H+ +N L + + + KAN K K+ + P ++L LRC Y+ +++P KT
Sbjct: 320 HRHVNQLYQKYRLFNATRKANANVSKIAKKEVIDSNPIFILFLRCSQLEYERSYEPSSKT 379
Query: 330 HVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
+ F DW+ LA I+ + K + D
Sbjct: 380 FLEFNDWKKPLAEIQNVLTKFLTKHRSDD 408
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 112/217 (51%), Gaps = 20/217 (9%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGK-SVAY 1217
I K L++ K + Q D KF+ A G + ++DQHA ERI+LE L K GE K +
Sbjct: 1459 IPKEMLQNFKFITQWDNKFLICEADGIVLILDQHAVSERIKLEILERKYF-GENKFDLCP 1517
Query: 1218 LDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAV 1277
+ L E +L++ + + ++ WG+ +FNK T I + V
Sbjct: 1518 MPERTRWSLTEYELELMRIYTKPLEQWGF--------KWTFNK---------TSINISQV 1560
Query: 1278 PCIFGVNLSDVDLLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1336
P V L DL EFL QL + G +S PP+ R+L SKACR AI FG+ L C
Sbjct: 1561 PMFCLVGLGVNDLREFLYQLESSKGATSNRPPAAHRILASKACRTAIKFGNKLSREICIK 1620
Query: 1337 IVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1373
++E+L + ++ FQCAHGRP+ +PL+N L + L
Sbjct: 1621 LLEDLNECNIPFQCAHGRPSIIPLINYGKLFSSVKGL 1657
>gi|291406753|ref|XP_002719689.1| PREDICTED: mutL homolog 3 isoform 2 [Oryctolagus cuniculus]
Length = 1453
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 181/347 (52%), Gaps = 19/347 (5%)
Query: 11 VRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVL 70
V+ +RSG + L + VEELV NS+DA AT V V V + V+V+D+G G+ +
Sbjct: 9 VQAKLRSGLAISSLGQCVEELVLNSIDAEATCVAVRVNMETYQVQVIDNGCGMGSVDVDK 68
Query: 71 LGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPNGYRKVM 129
+G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K + + K+
Sbjct: 69 VGNRY-FTSKCTSVQDLENPR---FYGFRGEALASIADMASTMEISSKKNRTMKTFVKLF 124
Query: 130 KGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVH 188
+ K L D R GTTV +LFY PVRRK M P+ V++ + ++L+H
Sbjct: 125 QNGKALKAYEADLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIEALSLMH 182
Query: 189 PKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISSP 248
P +SF + S +L + + +G+ L E++ E++GYISS
Sbjct: 183 PSISFSLRNDVSGSMVLQLPKTKDMCSRFCQIYGLRKSQKLREIHFKYKEFELNGYISS- 241
Query: 249 YDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGFLKGKRS 301
++ K Q++++N R V + +HKL++ L S C S S + N+ RS
Sbjct: 242 -EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQMNSS--PRHRS 298
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+ Y++N++CP YD+ +P KT + F++W+ L I+ ++
Sbjct: 299 TPELYGIYVMNVQCPFCEYDVCMEPAKTLIEFQNWDTPLVCIQEGVK 345
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 131/294 (44%), Gaps = 61/294 (20%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1157 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGKAGGN 1216
Query: 1186 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L V +DQHAA ERIRLE+L R K+LS + + E+ + E
Sbjct: 1217 LLVLVDQHAAHERIRLEQLLTESYEKQQPQGSGRKKLLS------STIIPPLEITVTEEQ 1270
Query: 1231 YQLLQNFAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPC 1279
+LL+ + ++++D G + I S S + N L+R + +T V
Sbjct: 1271 RRLLRCYHKRLEDLG-LEFIFPDTSDSLILVGKVPLCFVEREANELRRGRSTVTKSIVEE 1329
Query: 1280 IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1339
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E
Sbjct: 1330 FLR------EQVELLQTTGSIQG--TLPLTVQKVLASQACHGAIKFNDGLSLEESRRLIE 1381
Query: 1340 ELKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1387
L L FQCAHGRP+ +PL +++ L ++ +A+L ++ W + E
Sbjct: 1382 ALSCCQLPFQCAHGRPSMLPLADMDHLEQEKQKKPNLAKLRKMAQAWRLFGKAE 1435
>gi|291406751|ref|XP_002719688.1| PREDICTED: mutL homolog 3 isoform 1 [Oryctolagus cuniculus]
Length = 1421
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 181/347 (52%), Gaps = 19/347 (5%)
Query: 11 VRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVL 70
V+ +RSG + L + VEELV NS+DA AT V V V + V+V+D+G G+ +
Sbjct: 9 VQAKLRSGLAISSLGQCVEELVLNSIDAEATCVAVRVNMETYQVQVIDNGCGMGSVDVDK 68
Query: 71 LGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPNGYRKVM 129
+G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K + + K+
Sbjct: 69 VGNRY-FTSKCTSVQDLENPR---FYGFRGEALASIADMASTMEISSKKNRTMKTFVKLF 124
Query: 130 KGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVH 188
+ K L D R GTTV +LFY PVRRK M P+ V++ + ++L+H
Sbjct: 125 QNGKALKAYEADLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIEALSLMH 182
Query: 189 PKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISSP 248
P +SF + S +L + + +G+ L E++ E++GYISS
Sbjct: 183 PSISFSLRNDVSGSMVLQLPKTKDMCSRFCQIYGLRKSQKLREIHFKYKEFELNGYISS- 241
Query: 249 YDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGFLKGKRS 301
++ K Q++++N R V + +HKL++ L S C S S + N+ RS
Sbjct: 242 -EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQMNSS--PRHRS 298
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+ Y++N++CP YD+ +P KT + F++W+ L I+ ++
Sbjct: 299 TPELYGIYVMNVQCPFCEYDVCMEPAKTLIEFQNWDTPLVCIQEGVK 345
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 131/294 (44%), Gaps = 61/294 (20%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1125 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGKAGGN 1184
Query: 1186 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L V +DQHAA ERIRLE+L R K+LS + + E+ + E
Sbjct: 1185 LLVLVDQHAAHERIRLEQLLTESYEKQQPQGSGRKKLLS------STIIPPLEITVTEEQ 1238
Query: 1231 YQLLQNFAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPC 1279
+LL+ + ++++D G + I S S + N L+R + +T V
Sbjct: 1239 RRLLRCYHKRLEDLG-LEFIFPDTSDSLILVGKVPLCFVEREANELRRGRSTVTKSIVEE 1297
Query: 1280 IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1339
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E
Sbjct: 1298 FLR------EQVELLQTTGSIQG--TLPLTVQKVLASQACHGAIKFNDGLSLEESRRLIE 1349
Query: 1340 ELKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1387
L L FQCAHGRP+ +PL +++ L ++ +A+L ++ W + E
Sbjct: 1350 ALSCCQLPFQCAHGRPSMLPLADMDHLEQEKQKKPNLAKLRKMAQAWRLFGKAE 1403
>gi|390601117|gb|EIN10511.1| hypothetical protein PUNSTDRAFT_125326 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 861
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 182/371 (49%), Gaps = 32/371 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGV--CNCYVKVVD 58
+ T+ LP R ++RS +L L ++V EL+ NS+DAG++ + V V +C+VK D
Sbjct: 11 LPTLQGLPAPTRTSLRSTQILTSLPQIVSELLQNSLDAGSSHIEVGVNCEEWSCWVK--D 68
Query: 59 DGSGISRDGLVLLGE----RHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEI 114
DG+GI +DGL L E R TSK D++ + TFGFRGEALAS ++VS LE+
Sbjct: 69 DGTGIPKDGLRKLAECSEQRRYHTSK---AYDLNSLIDVSTFGFRGEALASAAEVSCLEV 125
Query: 115 ITKAHGRPNGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK 172
++ + + ++KG LY G + R+ GT V RD F+N PVRR ++P K
Sbjct: 126 ASRTNVSRECWSILVKGPNILYDGPSVRWRRETQGTVVCIRDAFFNIPVRRS-SHTAPGK 184
Query: 173 VLHSVKKCVLRIALVHPKVSFKFIDM---------ESEDELLCTCSSSSPLALLISSFGI 223
L ++++ + AL+ P VSF D + L+ ++S +A FG
Sbjct: 185 TLETIQRDIETYALMFPGVSFTLEDTNNRGASSTSRTTKRLMAIPKTTSTVASFRHMFGR 244
Query: 224 EDFSFLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
++E+N G + + G+IS + K++Q++Y+N + +G +H ++ +
Sbjct: 245 ALAEHVEEINVTSGDMALKGFIS--LEGALGKSYQFLYLNQHPIAQGGLHHVIESQFTAS 302
Query: 284 DCSDSWKANNGFLKGKRSKSQACP-------AYLLNLRCPHSLYDLTFDPLKTHVVFKDW 336
+ +G RS S+ P Y L+L + D +P K V F
Sbjct: 303 SFGKNAYDESGATSLPRSTSRRSPRKAQRHAVYCLDLTISRAHVDNVLEPAKVTVHFATD 362
Query: 337 EPVLAFIERAI 347
E V F+ AI
Sbjct: 363 EAVSTFLRDAI 373
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 51/255 (20%)
Query: 1155 IPDSINKSCLEDAKVLQQVDKKFIPVVAGG--------TLAVIDQHAADERIRLEE---- 1202
I ++ L A+VL QVD+KFI + +L ++DQHAADER+R+E
Sbjct: 587 ISQQLSAGQLARARVLGQVDRKFIACLLDAEADTRTEISLFLVDQHAADERVRVEHFLEE 646
Query: 1203 -----LRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQN---FAEQIKDWGW-ICNIHTQ 1253
LR+ + +G V LD + ++L + + A+ + WG+ I ++ Q
Sbjct: 647 LCQGYLRYDPATSQGVEVLPLDPPERVLLTQHEASVFARSAYIAKAFERWGFHITSVSEQ 706
Query: 1254 GSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLE-----FLQQLAD----TDGSS 1304
S + + + Q + + VP I G ++ + L+ ++ QL G
Sbjct: 707 DSSTSSLGKDYCQ-----VVVHTVPLIVGQKVTQGNQLQEFVKTYIAQLTSEGEFASGPQ 761
Query: 1305 TT----------------PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1348
T P ++L ++NSKACRGAIMF D L +C ++E+L + F
Sbjct: 762 TAEDPADEGSWQSALRWMPGALLEMVNSKACRGAIMFNDPLKKEQCERLIEQLSTKAFPF 821
Query: 1349 QCAHGRPTTVPLVNL 1363
QCAHGRP+ PL+ +
Sbjct: 822 QCAHGRPSVAPLMTI 836
>gi|449549459|gb|EMD40424.1| hypothetical protein CERSUDRAFT_130259 [Ceriporiopsis subvermispora
B]
Length = 887
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 212/441 (48%), Gaps = 47/441 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGV--CNCYVKVVDDGS 61
I +LP+ R+ +RS +L L ++V ELV NS+DAGA V + V +C+V+ DDG+
Sbjct: 13 IEQLPQTTRSKLRSTQILTSLPQIVSELVQNSLDAGAHNVDIGVNCEEWSCWVR--DDGA 70
Query: 62 GISRDGLVLL----GERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
GISRDGL +L G TSK A + + T TFGFRGEALAS +D+ LEI ++
Sbjct: 71 GISRDGLAVLEGGPGGGRYGTSKAYTPASLGEVT---TFGFRGEALASAADLCCLEISSR 127
Query: 118 AHGRPNGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
+ ++K K LY G I R+ GT V RD FYN PVRR + +P + +
Sbjct: 128 TARSRECWSVILKDGKSLYNGPSIRWRRESPGTVVCVRDAFYNLPVRR-FSHPTPARTIE 186
Query: 176 SVKKCVLRIALVHPKVSF------KFIDMES-EDELLCTCSSSSPLALLISSFGIEDFSF 228
++K + +ALV P+V+F K D E+ + +L ++S L+ + +G
Sbjct: 187 LIRKGIETLALVFPEVAFTLENTSKAGDGEARKGRVLAIPRTTSTLSSFRNLYGRALAEH 246
Query: 229 LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 288
+ E + + + + G+IS + KA+Q++Y+N + +H+L++ ++ S
Sbjct: 247 MQEFDESWNDMRLQGFIS--LEGALSKAYQFLYVNRHLMATSDLHRLIDQRFSNSTFSKH 304
Query: 289 WKANNGFL------KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF 342
G + + K++ P Y+LNL D +P K+ V +D AF
Sbjct: 305 SYDEAGEMSSRSESRRSPRKTEKKPVYVLNLLINPQQLDNCLEPAKSEVQLRDPGAASAF 364
Query: 343 IERAIRSAWMKKIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMF 402
+ I D+F + LP E+ + +++ L SP K D
Sbjct: 365 LSLVI----------DAFLIQ--HGFALPREAGK----RAACSLSDSPQKRRRLYDDGQG 408
Query: 403 HKECER--ITFQEFQKDPVEL 421
H+ R +T +QKD EL
Sbjct: 409 HRSINRPSVTASSYQKDAAEL 429
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 1307 PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
P +L ++NSKACRGAIMF D+L +C +V+ L +T+ FQCAHGRP+ VPL +L+
Sbjct: 802 PRELLELINSKACRGAIMFNDTLTLEQCIRLVKRLAETAFPFQCAHGRPSLVPLAHLD 859
>gi|295094833|emb|CBK83924.1| DNA mismatch repair protein MutL [Coprococcus sp. ART55/1]
Length = 717
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 180/352 (51%), Gaps = 27/352 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I L + N + +G V+ + V++ELV NS+D+GAT V V V G +++V D+G+G
Sbjct: 2 IKVLDQNTINKIAAGEVIEKPSSVIKELVENSIDSGATAVTVEVKGGGLSFLRVTDNGAG 61
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D + L RHA TSKL ++D I + GFRGEALASI+ V+ +E+ITK
Sbjct: 62 IKKDEVKLAFLRHA-TSKL---VTVEDLLSISSLGFRGEALASIAAVAQVEMITKTADDV 117
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G R + G K + ++ GTT++ R+LFYN P R+K+M++ + + + +
Sbjct: 118 TGLRYQIHGGK--EISSEEIGAPGGTTIIVRNLFYNTPARKKFMKTDATETSY-IYDLMC 174
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI + HP++SFKFI ++ L T + ++ +G + S L E+NA + ++IS
Sbjct: 175 RICMSHPEISFKFIANGTDK--LFTSGNGKLRDIIYHIYGRDITSNLLEINAENDYMKIS 232
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GYI+ P S ++F+ Y+N RY+ + K + +F +
Sbjct: 233 GYIARPCISRGNRSFEGYYVNHRYIKSAVLTKAIEDAFRTFVMIHKF------------- 279
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P +N + L D+ P K + F + + + +F AIR + K
Sbjct: 280 ----PFTEINFQVRPDLLDVNVHPTKMELKFANSQDIYSFTYNAIRETLLFK 327
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 1144 SGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEEL 1203
+G ++ + F + K +++ Q+ K + + G ++DQHAA E+++ EEL
Sbjct: 506 AGKKYVQQDMFQEKFLTKEARAKHRLIGQLFKTYWLIEYDGKFFIMDQHAAHEKVKYEEL 565
Query: 1204 RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLN 1263
+ + S YL + L + L + + G+ I G R F N
Sbjct: 566 MENYKNKKIYS-QYLMPPAVVTLSAAEIEFLHENMDMFEALGY--QIENFGGREFKLN-- 620
Query: 1264 LLQRQITVITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSS--TTPPSVLRVLNSKACR 1320
AVP +FG++ ++ F+ +AD S+ T + + L++ AC+
Sbjct: 621 ------------AVPDNLFGLDGREL----FIDFIADASSSAKKVTIDTFIHKLSTMACK 664
Query: 1321 GAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
AI + E ++++L + + C HGRPT + + E
Sbjct: 665 AAIKGNTEISFKEADALIDQLLKLENPYTCPHGRPTVISMTEAE 708
>gi|374296086|ref|YP_005046277.1| DNA mismatch repair protein MutL [Clostridium clariflavum DSM
19732]
gi|359825580|gb|AEV68353.1| DNA mismatch repair protein MutL [Clostridium clariflavum DSM
19732]
Length = 729
Score = 153 bits (386), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 177/355 (49%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E N + +G V+ VV+ELV NS+DAG++ + + + +KVVD+
Sbjct: 1 MGKIVILDENTANQIAAGEVVERPASVVKELVENSIDAGSSNISIEINNGGISMIKVVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI D + + ERH+ TSK+ DD I T GFRGEALASI+ VSL+E+ T+
Sbjct: 61 GSGIDEDDVEIAFERHS-TSKIRK---ADDLESIYTLGFRGEALASIASVSLVELTTRVK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+P Y K +K L + VGTT + RDLFYN P R K+++ + + V
Sbjct: 117 EKP--YGKYIKIQGGLVKEVRQTGCPVGTTFIVRDLFYNTPARFKFLKKDTTEAGY-VSD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIAL +P +S K ++ + + ++ T ++ L+ + S +G E + EV D +
Sbjct: 174 IVNRIALGNPHISIKLVN--NRNCVIHTPGNNDLLSTIFSLYGKETAKEVLEVRYKDEKV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EI GY P + + + +Q +YIN RY+ I ++ ++ + + F+
Sbjct: 232 EIFGYAGKPEIARTTRNYQSIYINGRYIRNKTIFSAIDEAYKTYLMKNKF----AFV--- 284
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
+L ++ D+ P K V F D + + + AI +A + K
Sbjct: 285 ----------VLQIKINPIFVDVNVHPTKMEVRFSDEQTIFRAVYHAINNALLSK 329
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 1164 LEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQE 1223
L DA+++ QV +I + +G L +IDQHAA ERIR EEL+ K E + L
Sbjct: 537 LIDARIIGQVFSTYILLQSGDDLLIIDQHAAHERIRFEELKRKYRENESLAQFLLSP--- 593
Query: 1224 LVLPEIGYQ---LLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCI 1280
V+ EI Q L+ E++ G+ +F KN +++ R + VI +P
Sbjct: 594 -VVIEITNQELKLIDENKEKLNKLGF-------SFENFGKN-SIILRSVPVI----LPDN 640
Query: 1281 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1340
+ S +D+L+FL + + L + AC+ A+ L E I+++
Sbjct: 641 ARIKESFLDVLDFLVNEKRKENVLVEEEA----LYTLACKAAVKANKKLDELEIKKILDD 696
Query: 1341 LKQTSLCFQCAHGRPTTVPLVN--LEALHKQI 1370
L + + C HGRPT + + E + K+I
Sbjct: 697 LNKIENPYTCPHGRPTIIKITKHEFEKMFKRI 728
>gi|395827847|ref|XP_003787104.1| PREDICTED: DNA mismatch repair protein Mlh3 [Otolemur garnettii]
Length = 1430
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 179/354 (50%), Gaps = 19/354 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAINSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRY-FTSKCNSVQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQLPVRRKSM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L +N E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKAKDVRSRFCQIYGLGKSQKLRAINFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK-- 299
SGYISS ++ K Q++++N R V K +HKL++ L S K NG +
Sbjct: 236 SGYISS--EAHYNKNIQFLFVNKRLVLKTKLHKLIDFLLRRE--SSICKPKNGPASRQMN 291
Query: 300 -----RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS + Y++N++C YD+ DP KT + F++W+ +L I+ ++
Sbjct: 292 SSPRHRSAPELHGIYIINVQCQFCEYDVCMDPAKTLIEFQNWDTLLICIQEGVK 345
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 118/277 (42%), Gaps = 63/277 (22%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1159 VDVSSGQAESLAVKIHNILFPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTGENGKAGGN 1218
Query: 1186 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L V +DQHAA ER+RLE+L R K+LS + L E+ + E
Sbjct: 1219 LLVLVDQHAAHERVRLEQLIIDSYEKQQPQGSGRKKLLS------STLIPPLEVTVTEEQ 1272
Query: 1231 YQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1290
+LL + +I G + +++ LQ I +
Sbjct: 1273 RRLLSIIS--TPSLSLALSILNTGKSTSTQSIICLQEFIR------------------EQ 1312
Query: 1291 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1350
+E LQ G T P +V +VL S+AC GAI F D L E ++ L L FQC
Sbjct: 1313 VELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSREESCHLISALSWCQLPFQC 1370
Query: 1351 AHGRPTTVPLVNLEALHKQ------IAQLNNSSELWH 1381
AHGRP+ +PL +++ L ++ + +L ++ WH
Sbjct: 1371 AHGRPSMLPLADIDHLEQEKQIKPNLVKLRKMAQAWH 1407
>gi|443244709|ref|YP_007377934.1| DNA mismatch repair protein [Nonlabens dokdonensis DSW-6]
gi|442802108|gb|AGC77913.1| DNA mismatch repair protein [Nonlabens dokdonensis DSW-6]
Length = 610
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 185/380 (48%), Gaps = 29/380 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGAT+V + V V+V+D+G G
Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATQVQLIVKNAGKTLVQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERH ATSK +++ DD + T GFRGEALAS++ VS + + +K
Sbjct: 65 MSMTDARMAFERH-ATSK---ISNADDLFNLHTKGFRGEALASVAAVSQISVKSKRQEDD 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++GSK + GT + R+LFYN P RRK+++S + L ++
Sbjct: 121 LGTLLEIEGSKVTKQ--EPVVSSQGTMISVRNLFYNVPARRKFLKSDQVE-LRNITDEFH 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+A+VHP+V+ F D L S+ ++S G + L V + I
Sbjct: 178 RVAMVHPEVAMSF---SHNDNSLFNLIKSTHRQRIVSIMGGKTNEKLVPVEEETELMSIK 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GYI P + + QY ++N R++ H LNH S A +G LK K
Sbjct: 235 GYIGKPEFARKTRGLQYFFVNGRFIK----HNYLNHAVLS--------AFDGLLKEK--- 279
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
+ PAY L L P D+ P KT V F D + A + +++ A + + +S D
Sbjct: 280 --SNPAYFLYLTVPRDSVDINIHPTKTEVKFDDEHSLYAILRASVKHA-LGQFTINSIDF 336
Query: 363 DMLEDAELPLESSRFQSHQS 382
+ E+P E ++ ++ S
Sbjct: 337 HQEKQYEVPYEVAKNKTSNS 356
>gi|366162303|ref|ZP_09462058.1| DNA mismatch repair protein MutL [Acetivibrio cellulolyticus CD2]
Length = 725
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 181/361 (50%), Gaps = 39/361 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
MG I L E N + +G V+ VV+ELV NS+DAG++ + + + GV +KVV
Sbjct: 1 MGKIVILDENTSNQIAAGEVVERPASVVKELVENSIDAGSSNISIEINNGGVS--LIKVV 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI D + + ERH+ TSK+ DD I T GFRGEALASI+ VSL+E+ ++
Sbjct: 59 DNGNGIDEDDVEIAFERHS-TSKIRR---ADDLESISTLGFRGEALASIASVSLVELTSR 114
Query: 118 AHGRPNG-YRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
R G Y K+ G I + R+ VGTT + RDLFYN P R K+++ +
Sbjct: 115 IKDRQYGKYIKIQGGI------IKEVRQTGCPVGTTFIVRDLFYNTPARFKFLKKDTTEA 168
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 233
+ + V RIAL + ++S K I+ + + ++ T ++ L+ + S +G E + EV
Sbjct: 169 GY-ISDMVNRIALGNQQISMKLIN--NRNSVIHTPGNNDLLSAIFSIYGKETAKEVLEVK 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
D +EI GY+ P + + + +Q +YIN RYV I ++ ++
Sbjct: 226 YQDEKIEIYGYVGKPEIARANRNYQSIYINGRYVKNKTISSAIDEAYKTY---------- 275
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
LK K +L++R D+ P K V F D + + A+ +A +
Sbjct: 276 -LLKNK------FAFVVLHIRINPLFVDVNVHPTKMEVRFSDEPAIFKAVYHAVNNALLS 328
Query: 354 K 354
K
Sbjct: 329 K 329
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 25/205 (12%)
Query: 1164 LEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQE 1223
L+ AK++ Q +I + G L +IDQHAA ERI E L+ K E + YL +
Sbjct: 533 LQAAKIIGQAFSTYILLQDGDNLILIDQHAAHERIMFEALKKKYKRNESLA-QYLLSSVV 591
Query: 1224 LVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV 1283
+ L ++++ E++ G+ +F N I L ++P
Sbjct: 592 IELTNQEVKIIEENREKLNRLGF-------AFENFGNN---------SIILRSIPVALAD 635
Query: 1284 NLSD----VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1339
N S +D+L+FL + ++ RV AC+ A+ L E I++
Sbjct: 636 NASVKETFLDILDFLMSDKRKENILIEEEALYRV----ACKSAVKANKRLDDIEIKKIIK 691
Query: 1340 ELKQTSLCFQCAHGRPTTVPLVNLE 1364
+L + C HGRPT + + E
Sbjct: 692 DLSNIENPYTCPHGRPTLIKITKYE 716
>gi|395329993|gb|EJF62378.1| hypothetical protein DICSQDRAFT_58321 [Dichomitus squalens LYAD-421
SS1]
Length = 885
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 180/374 (48%), Gaps = 30/374 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LP + + +RS +L L ++V ELV NS+DAGA + + + + V DDG+GI
Sbjct: 16 ITSLPPSTKTKLRSAQILTSLPQLVSELVQNSLDAGARNIEISIDPEDWECWVRDDGTGI 75
Query: 64 SRDGLVLLGE-----RHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 118
SRDGL +L R+ + + +D+ + FGFRGEALASI+++ LEI ++
Sbjct: 76 SRDGLAVLASGPEAGRYGTSKAYNTASSLDE---VNNFGFRGEALASIANLCCLEITSRT 132
Query: 119 HGRPNGYRKVMKGSKCLYLGIDD--ERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+ +MKG + LY G R+ GT V RD FYN P+RRK + + V
Sbjct: 133 KESSESWTVIMKGGQTLYTGPSTRWRRETSGTVVSVRDAFYNLPIRRKAHPNCARTV-EL 191
Query: 177 VKKCVLRIALVHPKVSFKFIDME---------SEDELLCTCSSSSPLALLISSFGIEDFS 227
V+K V +ALV P + F +++ ++ LL +SS L +G +
Sbjct: 192 VRKDVEALALVFPDICFAMENVQKTKDATRAKAKTRLLTVPKTSSSLLTFRHLYGKALAT 251
Query: 228 FLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
++E++ + + + G++S D KA+Q++YIN + +H+ + + A
Sbjct: 252 HVEEIDQSYAEMNLEGFVS--LDGAYSKAYQFLYINRHPLETCSLHRSVEGIFARTSFYK 309
Query: 288 SWKANNGFL------KGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV 339
+ + G+RS K + P Y+LNL P D T +P K V ++
Sbjct: 310 HVRRQTILMLTHLRSAGRRSPRKVEKKPVYVLNLTIPPRFIDNTVEPSKAAVQLQNSASA 369
Query: 340 LAFIERAIRSAWMK 353
AF+ + S ++
Sbjct: 370 TAFLSSVVESVLIR 383
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 116/266 (43%), Gaps = 63/266 (23%)
Query: 1160 NKSCLEDAKVLQQVDKKFIPVV-----------------AGGTLAVIDQHAADERIRLEE 1202
+K L A++L QVD+KFI V GG L +IDQHAADERIR+E
Sbjct: 595 SKDDLRGARILGQVDRKFIACVFSTTTDNETEPTDIQREGGGALVLIDQHAADERIRVER 654
Query: 1203 LRHKVLSG------------EGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKD------- 1243
+ G + V + P + L AE+I
Sbjct: 655 FLRGLCEGFLSHPCRPVPIRSERDVLEGGVRTRKLDPPVQILLTGPEAERIAGSHDVRKV 714
Query: 1244 ---WGWICNIHTQGSR------SFNKNLNLLQRQITVIT-LLAVPCIFGVNLSDV----- 1288
WG ++ + S S ++ + +Q + + ++A + G L D+
Sbjct: 715 FNRWGLAFSVPSAPSTNALAADSGAEHASYVQVPVGAVPEVVADKLLTGEELRDLVRGFL 774
Query: 1289 ------DLLEFLQQLADTDGSSTT------PPSVLRVLNSKACRGAIMFGDSLLPSECAL 1336
+LE + D D S+ P ++ ++NSKACRGAIMF D+L +C
Sbjct: 775 ARLESDGILEVMSLREDDDVSNWQKALRWCPRELVELINSKACRGAIMFNDTLTFEQCKA 834
Query: 1337 IVEELKQTSLCFQCAHGRPTTVPLVN 1362
+V +L +T L FQCAHGRP+ VPLV+
Sbjct: 835 LVAKLCETDLPFQCAHGRPSLVPLVD 860
>gi|296215528|ref|XP_002754163.1| PREDICTED: DNA mismatch repair protein Mlh3 [Callithrix jacchus]
Length = 1456
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 181/352 (51%), Gaps = 15/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSAEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALASIADMASTVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQNGKALKACEADVTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPRTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
+GYISS ++ K Q++++N R + + +HKL++ L S C ++N +
Sbjct: 236 NGYISS--EAHYNKNMQFLFVNKRLILRTKLHKLIDFLLRKESIICKPKNGSSNRQMNSS 293
Query: 300 ---RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 PRPRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLYCIQEGVK 345
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1161 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTNTEENGKAGGN 1220
Query: 1186 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1236
L V +DQHAA ER+RLE+L + G G+ + L E+ + E +LL+
Sbjct: 1221 LLVLVDQHAAHERVRLEQLINDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLRC 1280
Query: 1237 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1285
+ + ++D G + + S S + N L+R + +T V
Sbjct: 1281 YHKNLEDLG-LEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTRSMVEEFIR--- 1336
Query: 1286 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1345
+ +E LQ G P +V +VL S+AC GA+ F D L E ++E L
Sbjct: 1337 ---EQVELLQTTGGIQG--ILPLTVQKVLASQACHGAVKFNDGLSLEESCRLIEALSLCQ 1391
Query: 1346 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1393
L FQCAHGRP+ +PL +++ L ++ + +L ++ W + E +++
Sbjct: 1392 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1445
>gi|426233684|ref|XP_004010845.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 2 [Ovis aries]
Length = 1439
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 199/394 (50%), Gaps = 25/394 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSAEVQAKLRSGLAVCSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRY-FTSKCNSVQDLENPR---FYGFRGEALASIADMASAVEISSKKNKSM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQNGKALKACEAALTRPSTGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+N E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREINFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNG 294
+G+ISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 236 TGFISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQMNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++ ++KK
Sbjct: 294 --PRPRSNPELQGIYVINVQCQFCEYDVCLEPAKTLIEFQNWDTLLVCIQEGVK-MFLKK 350
Query: 355 ----IAHDSFDV-DMLEDAELPLESSRFQSHQSS 383
+ S D+ + ED + L S+ Q SS
Sbjct: 351 EKLFVELSSEDIKEFSEDNDFSLFSASLQKQVSS 384
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1195
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1160 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1219
Query: 1196 ERIRLEEL-RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGW-ICNIHTQ 1253
E+ + + R K+LS + + E+ + E +LL+ + + ++D G I T
Sbjct: 1220 EKQQPQGFGRKKLLS------SIVSPPLEITVTEEQRRLLRCYHKNLEDLGLEIVFPDTS 1273
Query: 1254 GSRSF---------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSS 1304
S + N L+R + +T V + +E LQ G
Sbjct: 1274 DSLVLIGKVPLCFVEREANELRRGRSTVTKGIVEEFIR------EQVELLQTTGGIQG-- 1325
Query: 1305 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL N++
Sbjct: 1326 TLPLTVQKVLASQACHGAIKFNDGLSFEESCRLIEALSWCQLPFQCAHGRPSMLPLANID 1385
Query: 1365 ALHKQ------IAQLNNSSELWHGLHRGE 1387
L ++ +A+L ++ WH +GE
Sbjct: 1386 HLEQEKQTKPNLAKLRRMAQAWHLFGKGE 1414
>gi|426233682|ref|XP_004010844.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 1 [Ovis aries]
Length = 1463
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 199/394 (50%), Gaps = 25/394 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSAEVQAKLRSGLAVCSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRY-FTSKCNSVQDLENPR---FYGFRGEALASIADMASAVEISSKKNKSM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQNGKALKACEAALTRPSTGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+N E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREINFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNG 294
+G+ISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 236 TGFISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQMNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++ ++KK
Sbjct: 294 --PRPRSNPELQGIYVINVQCQFCEYDVCLEPAKTLIEFQNWDTLLVCIQEGVK-MFLKK 350
Query: 355 ----IAHDSFDV-DMLEDAELPLESSRFQSHQSS 383
+ S D+ + ED + L S+ Q SS
Sbjct: 351 EKLFVELSSEDIKEFSEDNDFSLFSASLQKQVSS 384
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 131/293 (44%), Gaps = 59/293 (20%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1160 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1219
Query: 1186 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L V +DQHAA ER+RLE+L R K+LS + + E+ + E
Sbjct: 1220 LLVLVDQHAAHERVRLEQLIIDSYEKQQPQGFGRKKLLS------SIVSPPLEITVTEEQ 1273
Query: 1231 YQLLQNFAEQIKDWGW-ICNIHTQGSRSF---------NKNLNLLQRQITVITLLAVPCI 1280
+LL+ + + ++D G I T S + N L+R + +T V
Sbjct: 1274 RRLLRCYHKNLEDLGLEIVFPDTSDSLVLIGKVPLCFVEREANELRRGRSTVTKGIVEEF 1333
Query: 1281 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1340
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E
Sbjct: 1334 IR------EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSFEESCRLIEA 1385
Query: 1341 LKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1387
L L FQCAHGRP+ +PL N++ L ++ +A+L ++ WH +GE
Sbjct: 1386 LSWCQLPFQCAHGRPSMLPLANIDHLEQEKQTKPNLAKLRRMAQAWHLFGKGE 1438
>gi|402226291|gb|EJU06351.1| hypothetical protein DACRYDRAFT_113068 [Dacryopinax sp. DJM-731
SS1]
Length = 867
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 188/367 (51%), Gaps = 30/367 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVDDGS 61
I LPE R+ +RS +L +L ++V ELV NS+DAGA +V V + C+V+ DDG
Sbjct: 8 ITLLPEETRSILRSTQILTNLPQLVSELVQNSLDAGARQVDVGIHPEAWACWVR--DDGC 65
Query: 62 GISRDGLVLLGERHA----ATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
GI R+GL LL ATSK H + + + TFGFRGEALAS D++++EI +
Sbjct: 66 GIPREGLDLLARGREKGKYATSK-NHGTSVLEVSS--TFGFRGEALASAIDIAIVEISAR 122
Query: 118 AHGRPNGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
+ + + ++KG +Y G + + GT V +D FYN PVRR +P L
Sbjct: 123 SADK-GSWCIIVKGGNKIYAGPPLRWRTERPGTIVNIKDAFYNLPVRR-MSHPTPSATLQ 180
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDE-------LLCTCSSSSPLALLISSFGIEDFSF 228
+V++ + ++AL+ P V F +E E LL +SS L FG
Sbjct: 181 TVRRDIEKLALMFPHVCFTLEKSTTEREAGEGQKRLLTILKTSSVLDTFSHLFGKTLTQN 240
Query: 229 LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 288
++ + G + I G++S + K++Q++Y+N V +H +++ ++
Sbjct: 241 VEIIKERSGNITIEGFLS--LEGTPSKSYQFLYVNRHPVTPCELHTVIDRKFSATRFGRK 298
Query: 289 WKANNG----FLKGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF 342
NG KRS K++ P Y+LN+ P +L D++ +P K +V F+D + V++F
Sbjct: 299 ALDENGESVTQTSSKRSPRKTERRPVYVLNVSVPPTLLDISLEPAKGNVFFEDADTVISF 358
Query: 343 IERAIRS 349
+ + I S
Sbjct: 359 LGQTIES 365
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 127/261 (48%), Gaps = 54/261 (20%)
Query: 1159 INKSCLEDAKVLQQVDKKFI----PVVAGG------TLAVIDQHAADERIRLEE------ 1202
+++S L A V+ QVD+KF+ P++ L +IDQHAADERIR+E
Sbjct: 593 LSRSSLSQAVVINQVDRKFVACKVPLLTAAEQGIQSMLLMIDQHAADERIRVEHFLRNFC 652
Query: 1203 ---LRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQN---FAEQIKDWGWICNIHTQGSR 1256
L HK G V LD + + + + + LQ E + WG+ ++ ++ S
Sbjct: 653 VRFLHHK--DGCSVVVRELDPPKSIPITKQDAEFLQQESCVMEIFERWGFRLSL-SELSM 709
Query: 1257 SFNKNLNLLQRQITVITL---LAVPCIFGVNLSDV--DLLEFLQQ-------LADTDGSS 1304
+ ++ + I V ++ +AV + G L ++ D L LQ + ++G+
Sbjct: 710 FAHGREDIAEAHILVSSIPDAVAVKLLLGDQLKELVTDFLAKLQHEGVESVPIIQSEGTC 769
Query: 1305 TT-----------------PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1347
P ++ ++NS++CRGAIMF DSL ++C +V +L +T L
Sbjct: 770 INDVEARHKAGWMKALRWCPEGLIDLINSRSCRGAIMFNDSLSLTQCEQLVRQLSETVLP 829
Query: 1348 FQCAHGRPTTVPLVNLEALHK 1368
FQCAHGRP+ VPL ++ A K
Sbjct: 830 FQCAHGRPSMVPLTHMGAAFK 850
>gi|348573386|ref|XP_003472472.1| PREDICTED: DNA mismatch repair protein Mlh3-like isoform 2 [Cavia
porcellus]
Length = 1431
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 179/352 (50%), Gaps = 15/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V + V + V+VVD+G G+
Sbjct: 2 IKCLSVEVKAKLRSGLAINSLGQCVEELALNSIDAEAKCVAIRVNMETFQVQVVDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D++ +GFRGEALASI+D+ S +EI +K +G
Sbjct: 62 GSDDIDKVGNRY-FTSKCHSVQDLESPR---FYGFRGEALASIADMASAVEISSKTNGTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK + P+ V++ V
Sbjct: 118 KTFVKLFQNGKALKACEADLTRPSAGTTVTVCNLFYQLPVRRKCL--DPRLEFEKVRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDGSGSMVLQLPKTKDICSRFCQIYGLGKSQKLKEIHFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R V + +HKL++ L S C + +
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICKPKIGCASRQMNSS 293
Query: 300 ---RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS + Y++N++C YD+ +P KT + F++W+ +L ++ ++
Sbjct: 294 SRHRSTPELHGIYVVNVQCQFCEYDVCLEPAKTLIEFQNWDTLLICVQEGVK 345
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 116/269 (43%), Gaps = 35/269 (13%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1195
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1159 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENSEGDSY 1218
Query: 1196 ERIRLEEL-RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNI-HTQ 1253
E+ + + R K+LS + + E+ + + +LL + + ++D G HT
Sbjct: 1219 EKQQPQGCGRKKLLS------STIIPPLEITVTKEQRRLLGCYHKNLEDLGLEFTFPHTS 1272
Query: 1254 GSRSF---------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSS 1304
S + N L+R + +T V + +E LQ G
Sbjct: 1273 DSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR------EQVELLQTTGGIQG-- 1324
Query: 1305 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
T P +V +VL S+AC GAI F D L P E ++E L L FQCAHGRP+ +PL +L+
Sbjct: 1325 TLPLTVQKVLASQACHGAIKFNDHLSPEESYRLIEALSWCQLPFQCAHGRPSMLPLADLD 1384
Query: 1365 AL--HKQI----AQLNNSSELWHGLHRGE 1387
L KQI A+L ++ W + E
Sbjct: 1385 HLEHEKQIKPNLAKLRKMAQAWRLFGKAE 1413
>gi|348573384|ref|XP_003472471.1| PREDICTED: DNA mismatch repair protein Mlh3-like isoform 1 [Cavia
porcellus]
Length = 1455
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 179/352 (50%), Gaps = 15/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V + V + V+VVD+G G+
Sbjct: 2 IKCLSVEVKAKLRSGLAINSLGQCVEELALNSIDAEAKCVAIRVNMETFQVQVVDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D++ +GFRGEALASI+D+ S +EI +K +G
Sbjct: 62 GSDDIDKVGNRY-FTSKCHSVQDLESPR---FYGFRGEALASIADMASAVEISSKTNGTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK + P+ V++ V
Sbjct: 118 KTFVKLFQNGKALKACEADLTRPSAGTTVTVCNLFYQLPVRRKCL--DPRLEFEKVRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDGSGSMVLQLPKTKDICSRFCQIYGLGKSQKLKEIHFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R V + +HKL++ L S C + +
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICKPKIGCASRQMNSS 293
Query: 300 ---RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS + Y++N++C YD+ +P KT + F++W+ +L ++ ++
Sbjct: 294 SRHRSTPELHGIYVVNVQCQFCEYDVCLEPAKTLIEFQNWDTLLICVQEGVK 345
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 127/293 (43%), Gaps = 59/293 (20%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV-----------AGG 1184
+D+SSG L P K + +VLQQVD KFI + G
Sbjct: 1159 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENSEGGGN 1218
Query: 1185 TLAVIDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L ++DQHAA ERIRLE+L R K+LS + + E+ + +
Sbjct: 1219 LLILVDQHAAHERIRLEQLIADSYEKQQPQGCGRKKLLS------STIIPPLEITVTKEQ 1272
Query: 1231 YQLLQNFAEQIKDWGWICNI-HTQGSRSF---------NKNLNLLQRQITVITLLAVPCI 1280
+LL + + ++D G HT S + N L+R + +T V
Sbjct: 1273 RRLLGCYHKNLEDLGLEFTFPHTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEF 1332
Query: 1281 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1340
+ +E LQ G T P +V +VL S+AC GAI F D L P E ++E
Sbjct: 1333 IR------EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDHLSPEESYRLIEA 1384
Query: 1341 LKQTSLCFQCAHGRPTTVPLVNLEAL--HKQI----AQLNNSSELWHGLHRGE 1387
L L FQCAHGRP+ +PL +L+ L KQI A+L ++ W + E
Sbjct: 1385 LSWCQLPFQCAHGRPSMLPLADLDHLEHEKQIKPNLAKLRKMAQAWRLFGKAE 1437
>gi|291542655|emb|CBL15765.1| DNA mismatch repair protein MutL [Ruminococcus bromii L2-63]
Length = 705
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 178/354 (50%), Gaps = 27/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
MG IN L + V + +G V+ V++ELV NS+DAGA + V + +++V DD
Sbjct: 1 MGVINVLDKHVAELIAAGEVVERPASVIKELVENSIDAGAKNITVEIKNGGTTFMRVADD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI RD + + RHA TSK+ +D+D I T GFRGEALASI VS L++IT+
Sbjct: 61 GCGIYRDDIKVAFLRHA-TSKVKVESDLD---SISTLGFRGEALASICAVSRLQLITRNV 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + G + DD VGTT V RDLFYN P R K+++ + ++V
Sbjct: 117 NEEIGTSYEIDGGE--EQSFDDAGCPVGTTFVIRDLFYNIPARAKFLKKDVSE-GNAVSN 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ + AL HP+++F +I + ++L T ++ + S FG + L V+ A+
Sbjct: 174 IIDKTALSHPEIAFTYI--KDGKQVLRTFGDGKLISAIYSVFGKDFAKGLIPVDYQLDAI 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++ GYIS P S + Q +IN RY+ A +++K + + GK
Sbjct: 232 KVYGYISKPEHSRPNRNMQNFFINGRYI---------KTRTAMVALEEAFKGS--IMVGK 280
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
P+ +LN+ P + D+ P K V F + PV I A++S+ MK
Sbjct: 281 ------FPSCVLNIELPCEMIDVNVHPSKLEVRFINERPVFDAIYHAVKSSLMK 328
>gi|348573388|ref|XP_003472473.1| PREDICTED: DNA mismatch repair protein Mlh3-like isoform 3 [Cavia
porcellus]
Length = 1422
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 179/352 (50%), Gaps = 15/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V + V + V+VVD+G G+
Sbjct: 2 IKCLSVEVKAKLRSGLAINSLGQCVEELALNSIDAEAKCVAIRVNMETFQVQVVDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D++ +GFRGEALASI+D+ S +EI +K +G
Sbjct: 62 GSDDIDKVGNRY-FTSKCHSVQDLESPR---FYGFRGEALASIADMASAVEISSKTNGTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK + P+ V++ V
Sbjct: 118 KTFVKLFQNGKALKACEADLTRPSAGTTVTVCNLFYQLPVRRKCL--DPRLEFEKVRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDGSGSMVLQLPKTKDICSRFCQIYGLGKSQKLKEIHFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R V + +HKL++ L S C + +
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICKPKIGCASRQMNSS 293
Query: 300 ---RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS + Y++N++C YD+ +P KT + F++W+ +L ++ ++
Sbjct: 294 SRHRSTPELHGIYVVNVQCQFCEYDVCLEPAKTLIEFQNWDTLLICVQEGVK 345
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 127/293 (43%), Gaps = 59/293 (20%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV-----------AGG 1184
+D+SSG L P K + +VLQQVD KFI + G
Sbjct: 1126 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENSEGGGN 1185
Query: 1185 TLAVIDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L ++DQHAA ERIRLE+L R K+LS + + E+ + +
Sbjct: 1186 LLILVDQHAAHERIRLEQLIADSYEKQQPQGCGRKKLLS------STIIPPLEITVTKEQ 1239
Query: 1231 YQLLQNFAEQIKDWGWICNI-HTQGSRSF---------NKNLNLLQRQITVITLLAVPCI 1280
+LL + + ++D G HT S + N L+R + +T V
Sbjct: 1240 RRLLGCYHKNLEDLGLEFTFPHTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEF 1299
Query: 1281 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1340
+ +E LQ G T P +V +VL S+AC GAI F D L P E ++E
Sbjct: 1300 IR------EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDHLSPEESYRLIEA 1351
Query: 1341 LKQTSLCFQCAHGRPTTVPLVNLEAL--HKQI----AQLNNSSELWHGLHRGE 1387
L L FQCAHGRP+ +PL +L+ L KQI A+L ++ W + E
Sbjct: 1352 LSWCQLPFQCAHGRPSMLPLADLDHLEHEKQIKPNLAKLRKMAQAWRLFGKAE 1404
>gi|197100348|ref|NP_001124874.1| DNA mismatch repair protein Mlh3 [Pongo abelii]
gi|55726207|emb|CAH89876.1| hypothetical protein [Pongo abelii]
Length = 1273
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 181/354 (51%), Gaps = 19/354 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNG 294
GYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 236 GGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGSTSRQMNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS + Y++N++C YD+ +P KT + F+DW+ +L I+ ++
Sbjct: 294 L--RHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQDWDTLLFCIQEGVK 345
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 1291 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1350
+E LQ G T P +V +VL S+AC GAI F D L E ++E L L FQC
Sbjct: 1158 VELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQC 1215
Query: 1351 AHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1393
AHGRP+ +PL +++ L ++ + +L+ ++ W + E +++
Sbjct: 1216 AHGRPSMLPLADIDHLEQEKQIKPNLTKLHKMAQAWRLFGKAECDARQS 1264
>gi|397507484|ref|XP_003824225.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3
[Pan paniscus]
Length = 1451
Score = 150 bits (378), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 17/353 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSTVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGF 295
SGYISS ++ K Q++++N R V + +HKL++ L S C + + N
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
L+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 LR-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 130/301 (43%), Gaps = 63/301 (20%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1156 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1215
Query: 1186 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1236
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1216 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1275
Query: 1237 FAEQIKDWGW------------------ICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
+ + ++D G +C + + N L+R + +T V
Sbjct: 1276 YHKNLEDLGLEFAFPDTSDSLVLVGKVPLCFVEREA--------NELRRGRSTVTKSIVE 1327
Query: 1279 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1338
+ LE LQ G T P +V +VL S+AC GAI F D L E ++
Sbjct: 1328 EFIR------EQLELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLI 1379
Query: 1339 EELKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKR 1392
E L L FQCAHGRP+ +PL +++ L ++ + +L ++ WH + E ++
Sbjct: 1380 EALSSCQLPFQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWHLFGKAECDTRQ 1439
Query: 1393 A 1393
+
Sbjct: 1440 S 1440
>gi|332223313|ref|XP_003260811.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 2 [Nomascus
leucogenys]
Length = 1429
Score = 150 bits (378), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 182/354 (51%), Gaps = 19/354 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNG 294
SGYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLVDFLLRKESIICKPKNGSTSRQMNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 L--RHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 37/264 (14%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1195
+D+SSG L P K + +VLQQVD KFI + + + +
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKIEENGEADSY 1217
Query: 1196 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1254
E+ + + R K+LS + L E+ + E +LL + + ++D G + +
Sbjct: 1218 EKHQAQGSGRKKLLS------STLIPPLEITVTEEQRRLLWCYHKNLEDLG-LEFVFPDT 1270
Query: 1255 SRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGS 1303
S S + N L+R + +T V + +E LQ G
Sbjct: 1271 SDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR------EQVELLQTTGGIQG- 1323
Query: 1304 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL ++
Sbjct: 1324 -TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADI 1382
Query: 1364 EALHKQ------IAQLNNSSELWH 1381
+ L ++ +A+L ++ W
Sbjct: 1383 DHLEQEKQIKPNLAKLRKMAQAWR 1406
>gi|332223311|ref|XP_003260810.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 1 [Nomascus
leucogenys]
Length = 1453
Score = 149 bits (377), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 182/354 (51%), Gaps = 19/354 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNG 294
SGYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLVDFLLRKESIICKPKNGSTSRQMNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 L--RHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 128/283 (45%), Gaps = 51/283 (18%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKIEENGEAGGN 1217
Query: 1186 LAV-IDQHAADERIRLEEL------RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQ 1235
L V +DQHAA ERIRLE+L +H+ G G+ + L E+ + E +LL
Sbjct: 1218 LLVLVDQHAAHERIRLEQLIIDSYEKHQA-QGSGRKKLLSSTLIPPLEITVTEEQRRLLW 1276
Query: 1236 NFAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVN 1284
+ + ++D G + + S S + N L+R + +T V
Sbjct: 1277 CYHKNLEDLG-LEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR-- 1333
Query: 1285 LSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1344
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1334 ----EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSC 1387
Query: 1345 SLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWH 1381
L FQCAHGRP+ +PL +++ L ++ +A+L ++ W
Sbjct: 1388 QLPFQCAHGRPSMLPLADIDHLEQEKQIKPNLAKLRKMAQAWR 1430
>gi|114653978|ref|XP_001158621.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 5 [Pan
troglodytes]
gi|410335097|gb|JAA36495.1| mutL homolog 3 [Pan troglodytes]
Length = 1451
Score = 149 bits (377), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 17/353 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGF 295
SGYISS ++ K Q++++N R V + +HKL++ L S C + + N
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
L+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 LR-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 130/301 (43%), Gaps = 63/301 (20%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1156 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1215
Query: 1186 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1236
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1216 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1275
Query: 1237 FAEQIKDWGW------------------ICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
+ + ++D G +C + + N L+R + +T V
Sbjct: 1276 YHKNLEDLGLEFAFPDTSDSLVLVGKVPLCFVEREA--------NELRRGRSTVTKSIVE 1327
Query: 1279 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1338
+ LE LQ G T P +V +VL S+AC GAI F D L E ++
Sbjct: 1328 EFIR------EQLELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLI 1379
Query: 1339 EELKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKR 1392
E L L FQCAHGRP+ +PL +++ L ++ + +L ++ WH + E ++
Sbjct: 1380 EALSSCQLPFQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWHLFGKAECDTRQ 1439
Query: 1393 A 1393
+
Sbjct: 1440 S 1440
>gi|114653982|ref|XP_001158557.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 4 [Pan
troglodytes]
gi|410335099|gb|JAA36496.1| mutL homolog 3 [Pan troglodytes]
Length = 1427
Score = 149 bits (377), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 17/353 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGF 295
SGYISS ++ K Q++++N R V + +HKL++ L S C + + N
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
L+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 LR-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 118/283 (41%), Gaps = 51/283 (18%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1195
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1156 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1215
Query: 1196 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGW-------- 1246
E+ + + R K+LS + L E+ + E +LL + + ++D G
Sbjct: 1216 EKQQAQGSGRKKLLS------STLIPPLEITVTEEQRRLLWCYHKNLEDLGLEFAFPDTS 1269
Query: 1247 ----------ICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQ 1296
+C + + N L+R + +T V + LE LQ
Sbjct: 1270 DSLVLVGKVPLCFVEREA--------NELRRGRSTVTKSIVEEFIR------EQLELLQT 1315
Query: 1297 LADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
G T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+
Sbjct: 1316 TGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPS 1373
Query: 1357 TVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1393
+PL +++ L ++ + +L ++ WH + E +++
Sbjct: 1374 MLPLADIDHLEQEKQIKPNLTKLRKMAQAWHLFGKAECDTRQS 1416
>gi|91992160|ref|NP_055196.2| DNA mismatch repair protein Mlh3 isoform 2 [Homo sapiens]
Length = 1429
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 17/353 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGF 295
SGYISS ++ K Q++++N R V + +HKL++ L S C + + N
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
L+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 LR-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 37/276 (13%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1195
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1217
Query: 1196 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1254
E+ + + R K+LS + L E+ + E +LL + + ++D G + +
Sbjct: 1218 EKQQAQGSGRKKLLS------STLIPPLEITVTEEQRRLLWCYHKNLEDLG-LEFVFPDT 1270
Query: 1255 SRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGS 1303
S S + N L+R + +T V + LE LQ G
Sbjct: 1271 SDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR------EQLELLQTTGGIQG- 1323
Query: 1304 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL ++
Sbjct: 1324 -TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADI 1382
Query: 1364 EALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1393
+ L ++ + +L ++ W + E +++
Sbjct: 1383 DHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1418
>gi|6689930|gb|AAF23905.1| DNA mismatch repair protein [Homo sapiens]
gi|85567604|gb|AAI12168.1| MutL homolog 3 (E. coli) [Homo sapiens]
gi|119601619|gb|EAW81213.1| mutL homolog 3 (E. coli), isoform CRA_c [Homo sapiens]
gi|119601620|gb|EAW81214.1| mutL homolog 3 (E. coli), isoform CRA_c [Homo sapiens]
gi|313883808|gb|ADR83390.1| mutL homolog 3 (E. coli) [synthetic construct]
Length = 1429
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 17/353 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGF 295
SGYISS ++ K Q++++N R V + +HKL++ L S C + + N
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
L+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 LR-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 37/276 (13%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1195
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1217
Query: 1196 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1254
E+ + + R K+LS + L E+ + E +LL + + ++D G + +
Sbjct: 1218 EKQQAQGSGRKKLLS------STLIPPLEITVTEEQRRLLWCYHKNLEDLG-LEFVFPDT 1270
Query: 1255 SRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGS 1303
S S + N L+R + +T V + LE LQ G
Sbjct: 1271 SDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR------EQLELLQTTGGIQG- 1323
Query: 1304 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL ++
Sbjct: 1324 -TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADI 1382
Query: 1364 EALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1393
+ L ++ + +L ++ W + E +++
Sbjct: 1383 DHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1418
>gi|62003157|gb|AAX59030.1| mutL 3 homolog (E.coli) [Homo sapiens]
Length = 1429
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 17/353 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGF 295
SGYISS ++ K Q++++N R V + +HKL++ L S C + + N
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
L+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 LR-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 37/276 (13%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1195
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1217
Query: 1196 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1254
E+ + + R K+LS + L E+ + E +LL + + ++D G + +
Sbjct: 1218 EKQQAQGSGRKKLLS------STLIPPLEITVTEEQRRLLWCYHKNLEDLG-LEFVFPDT 1270
Query: 1255 SRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGS 1303
S S + N L+R + +T V + LE LQ G
Sbjct: 1271 SDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR------EQLELLQTTGGIQG- 1323
Query: 1304 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL ++
Sbjct: 1324 -TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADI 1382
Query: 1364 EALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1393
+ L ++ + +L ++ W + E +++
Sbjct: 1383 DHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1418
>gi|7209866|dbj|BAA92353.1| DNA mismatch repair protein MLH3 [Homo sapiens]
Length = 1453
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 17/353 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGF 295
SGYISS ++ K Q++++N R V + +HKL++ L S C + + N
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
L+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 LR-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 1186 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1236
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1218 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1277
Query: 1237 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1285
+ + ++D G + + S S + N L+R + +T V
Sbjct: 1278 YHKNLEDLG-LEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR--- 1333
Query: 1286 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1345
+ LE LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1334 ---EQLELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQ 1388
Query: 1346 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1393
L FQCAHGRP+ +PL +++ L ++ + +L ++ W + E +++
Sbjct: 1389 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1442
>gi|317121912|ref|YP_004101915.1| DNA mismatch repair protein MutL [Thermaerobacter marianensis DSM
12885]
gi|315591892|gb|ADU51188.1| DNA mismatch repair protein MutL [Thermaerobacter marianensis DSM
12885]
Length = 726
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 171/355 (48%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I RL V N + +G V+ VV+ELV NS+DAGA ++ V V + V DD
Sbjct: 1 MGRIRRLDPQVINQIAAGEVVERPASVVKELVENSLDAGARRIRVDVEEGGLRSITVADD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ D +L ERHA TSK+ L D+ A GT GFRGEALA+I+ V+ LE+IT+
Sbjct: 61 GCGMDPDDAMLAVERHA-TSKITRLDDLAHA---GTLGFRGEALAAIASVARLELITRPP 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G+R V++G G GT V RDLF+N P RRK+++ P +
Sbjct: 117 GADGGFRVVVEGGTA--RGAGPWASPPGTRVTVRDLFFNTPARRKHLK-GPAAEFARIAD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V AL P+V F+ + + E+L T S +++ FG + L V A DG
Sbjct: 174 VVTAHALARPEVRFELV--HNGREVLRTSGSGDRAVVVLECFGPDVAGALIPVVAGDGLR 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ GY+ +P + + +A+Q+ IN R V + F ++++ L +
Sbjct: 232 RVEGYVGAPRVARASRAWQFFSINRRPVQVASLR---------FSLENAYRH---LLPAR 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
R P ++++ P D+ P K V V A + A++ A K+
Sbjct: 280 R-----YPVAVVDVALPGEEVDVNVHPAKLEVRLVRERAVAALLYGAVQDALAKR 329
>gi|91992162|ref|NP_001035197.1| DNA mismatch repair protein Mlh3 isoform 1 [Homo sapiens]
gi|317373417|sp|Q9UHC1.3|MLH3_HUMAN RecName: Full=DNA mismatch repair protein Mlh3; AltName: Full=MutL
protein homolog 3
Length = 1453
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 17/353 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGF 295
SGYISS ++ K Q++++N R V + +HKL++ L S C + + N
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
L+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 LR-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 1186 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1236
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1218 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1277
Query: 1237 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1285
+ + ++D G + + S S + N L+R + +T V
Sbjct: 1278 YHKNLEDLG-LEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR--- 1333
Query: 1286 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1345
+ LE LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1334 ---EQLELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQ 1388
Query: 1346 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1393
L FQCAHGRP+ +PL +++ L ++ + +L ++ W + E +++
Sbjct: 1389 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1442
>gi|6689928|gb|AAF23904.1|AF195657_1 DNA mismatch repair protein [Homo sapiens]
Length = 1429
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 17/353 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGF 295
SGYISS ++ K Q++++N R V + +HKL++ L S C + + N
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
L+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 LR-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 37/276 (13%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1195
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1217
Query: 1196 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1254
E+ + + R K+LS + L E+ + E +LL + + ++D G + +
Sbjct: 1218 EKQQAQGSGRKKLLS------STLIPPLEITVTEEQRRLLWCYHKNLEDLG-LEFVFPDT 1270
Query: 1255 SRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGS 1303
S S + N L+R + +T V + LE LQ G
Sbjct: 1271 SDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR------EQLELLQTTGGIQG- 1323
Query: 1304 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL ++
Sbjct: 1324 -TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADI 1382
Query: 1364 EALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1393
+ L ++ + +L ++ W + E +++
Sbjct: 1383 DHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1418
>gi|119601617|gb|EAW81211.1| mutL homolog 3 (E. coli), isoform CRA_a [Homo sapiens]
Length = 1445
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 17/353 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGF 295
SGYISS ++ K Q++++N R V + +HKL++ L S C + + N
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
L+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 LR-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 97.1 bits (240), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 128/292 (43%), Gaps = 53/292 (18%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 1186 LAV-IDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDW 1244
L V +DQHAA ERIRLE+L ++ K A ++L+ + L E+ +
Sbjct: 1218 LLVLVDQHAAHERIRLEQL---IIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRL 1274
Query: 1245 GWICNIHTQGSRSFNKNLNLLQRQI-------TVITLLAVPCIF----------GVNLSD 1287
W ++KNL L + +++ + VP F G +
Sbjct: 1275 LWC----------YHKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVT 1324
Query: 1288 VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1347
++E LQ G T P +V +VL S+AC GAI F D L E ++E L L
Sbjct: 1325 KSIVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLP 1382
Query: 1348 FQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1393
FQCAHGRP+ +PL +++ L ++ + +L ++ W + E +++
Sbjct: 1383 FQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1434
>gi|335292797|ref|XP_001926322.2| PREDICTED: DNA mismatch repair protein Mlh3 isoform 2 [Sus scrofa]
Length = 1456
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 197/387 (50%), Gaps = 25/387 (6%)
Query: 11 VRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVL 70
V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+ + +
Sbjct: 9 VQARLRSGLAICSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGIGMGSEDVDK 68
Query: 71 LGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPNGYRKVM 129
+G R+ TSK + D+++ +GFRGEALASI+D+ S +EI ++ + + K+
Sbjct: 69 VGNRY-FTSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSRRNKSMKTFVKLF 124
Query: 130 KGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVH 188
+ K L D R GTTV +LFY PVRRK M P+ V++ V ++L+H
Sbjct: 125 QNGKALKACEADLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRVEALSLMH 182
Query: 189 PKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISSP 248
P VSF + S +L + + +G+ L E+N E++G+IS+
Sbjct: 183 PSVSFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREINFKYKEFELNGFISA- 241
Query: 249 YDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGFLKGKRS 301
++ K Q++++N R + + +HKL++ L S C S S + N G R
Sbjct: 242 -EAHYNKNMQFLFVNKRLILRTKLHKLIDFLLRKESIICKPKNGSASRQMNCG--PRPRP 298
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK----IAH 357
+ Y++N++C YD+ +P KT + F++W+ +L I+ ++ ++KK +
Sbjct: 299 NPELHGIYVINMQCQFCEYDVCLEPAKTLIEFQNWDTLLVCIQEGVK-MFLKKEKLFVEL 357
Query: 358 DSFDV-DMLEDAELPLESSRFQSHQSS 383
+ D+ + ED + L S+ Q SS
Sbjct: 358 SNEDIKEFSEDNDFSLFSTTLQKQVSS 384
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 132/294 (44%), Gaps = 47/294 (15%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1160 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEEDGEAGGN 1219
Query: 1186 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1236
L V +DQHAA ERIRLE+L + G G+ + ++ E+ + E +LL+
Sbjct: 1220 LLVLVDQHAAHERIRLEQLIADSYEKQQAQGSGRKKLLSSTVNPPLEIPVTEEQRRLLRC 1279
Query: 1237 FAEQIKDWGWICNIHTQGSRS----------FNKNLNLLQRQITVITLLAVPCIFGVNLS 1286
+ + ++D G R + N L+R + +T V
Sbjct: 1280 YHKNLEDLGLEIIFPDTSDRLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR---- 1335
Query: 1287 DVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
+ +E LQ G T P +V +VL S+AC GAI F DSL E ++E L L
Sbjct: 1336 --EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDSLSLEESCRLIEALSWCQL 1391
Query: 1347 CFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRAS 1394
FQCAHGRP+ +PL +++ L ++ +A+L ++ WH + E S R S
Sbjct: 1392 PFQCAHGRPSMLPLADVDHLEQEKQIKPNLAKLRRMTQAWHLFGKAEGSDTRQS 1445
>gi|119601618|gb|EAW81212.1| mutL homolog 3 (E. coli), isoform CRA_b [Homo sapiens]
gi|119601621|gb|EAW81215.1| mutL homolog 3 (E. coli), isoform CRA_b [Homo sapiens]
Length = 1453
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 17/353 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGF 295
SGYISS ++ K Q++++N R V + +HKL++ L S C + + N
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSS 293
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
L+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 LR-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 1186 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1236
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1218 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1277
Query: 1237 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1285
+ + ++D G + + S S + N L+R + +T V
Sbjct: 1278 YHKNLEDLG-LEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR--- 1333
Query: 1286 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1345
+ LE LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1334 ---EQLELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQ 1388
Query: 1346 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1393
L FQCAHGRP+ +PL +++ L ++ + +L ++ W + E +++
Sbjct: 1389 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1442
>gi|239623995|ref|ZP_04667026.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522026|gb|EEQ61892.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 786
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 176/355 (49%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ VV+EL+ N++DA AT V + + C ++V D+
Sbjct: 1 MANITVLDQNTINKIAAGEVIERPASVVKELLENAIDAQATAVTIEIKDGGCSMIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI++D + L RHA TSK+ + D+ + + GFRGEALASI+ V+ +E+ITK
Sbjct: 61 GSGIAKDQIALAFLRHA-TSKIKSVEDL---FTVSSLGFRGEALASIAAVAQVELITKTS 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R ++G + G+++ GTT+++R+LFYN P R+K++++ + H V
Sbjct: 117 DSLTGTRYQIEGG--MEKGLEEIGAPEGTTIIARNLFYNTPARKKFLKTPMTEGAH-VAA 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +IAL HP +S +FI ++ L T + + L+ + FG E + L V+ +
Sbjct: 174 LVEKIALSHPDISIRFI--QNNQNKLYTSGNHNLKDLIYTVFGREIAANLLSVDFEQPGM 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+++G+I P + S + ++ +IN RY+ I K + F +
Sbjct: 232 QVTGFIGKPVIARSNRNYENYFINGRYIRSNIISKAIEEAYKPFMMQHKY---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P +L+ D+ P K + F D E V + +A+ A K
Sbjct: 282 -------PFTMLHFTIQPDTLDVNVHPTKMELRFSDGESVYKSVVKAVGDALAHK 329
Score = 43.1 bits (100), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 20/180 (11%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L +IDQHAA E++ L E K L ++ L L LL + E G
Sbjct: 617 LFIIDQHAAHEKV-LYEKTIKTLKTRQYDTQMVEPPIILTLNMNEELLLNKYMEYFTGMG 675
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLSDVDLLEFLQQLADTDGSS 1304
+ I G R + + VP +F + D+ L+E L L+D D S
Sbjct: 676 F--EIEPFGGREY--------------AVRGVPANLFSIAKKDL-LIEMLDGLSD-DMSV 717
Query: 1305 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
P + + S +C+ A+ S+ SE ++++L + C HGRPT + + E
Sbjct: 718 HNPDIIYEKVASMSCKAAVKGHHSMSFSEANELIDQLLGLDNPYACPHGRPTIISMSKYE 777
>gi|281351439|gb|EFB27023.1| hypothetical protein PANDA_002680 [Ailuropoda melanoleuca]
Length = 1454
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 183/362 (50%), Gaps = 24/362 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQARLRSGLAICSLGQCVEELALNSLDAEAKCVAVRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDIDKVGNRY-FTSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTG 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQFPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L ++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLAKSQKLRDIKFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R + + +HK ++ L S C K NG +
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLILRTKLHKFIDFLLRKESIIC----KPKNGSAARQ 289
Query: 300 -------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
RS + Y++N++C YD+ +P KT + F++W+ VL I+ ++ ++
Sbjct: 290 MNSSPRHRSNPELHGIYVVNMQCRFCEYDVCMEPAKTLIEFQNWDTVLVCIQEGVK-MFL 348
Query: 353 KK 354
KK
Sbjct: 349 KK 350
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 47/287 (16%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L+ P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAKSLVVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 1186 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L V +DQHAA ER+RLE+L R K+LS + + E+ + E
Sbjct: 1218 LLVLVDQHAAHERVRLEQLITDSYEKQQPQGSGRKKLLS------SIVSPPLEIRVTEEQ 1271
Query: 1231 YQLLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSD 1287
+LL+ + + ++D G I T S + L ++R+ + P +
Sbjct: 1272 RRLLRCYHKNLEDLGLEIIFPDTSDSLVLVGKVPLCFVEREANELRRGRSPVTKSIVEEF 1331
Query: 1288 V-DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
+ + +E LQ G T P +V +VL S+AC GAI F D L P E ++E L L
Sbjct: 1332 IREQVELLQTTGAIQG--TLPLTVQKVLASQACHGAIKFNDGLSPEESCRLIEALSWCQL 1389
Query: 1347 CFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1387
FQCAHGRP+ +PL +++ L ++ +A+L ++ WH + E
Sbjct: 1390 PFQCAHGRPSMLPLADIDHLEEEKQIKPNLAKLRKMAQAWHLFGKAE 1436
>gi|371777328|ref|ZP_09483650.1| DNA mismatch repair protein mutL [Anaerophaga sp. HS1]
Length = 623
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 192/395 (48%), Gaps = 38/395 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ VV+ELV N+VDAG+T++ V + ++++D+G G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAVDAGSTEIQVIIKDAGRTLIQIIDNGCG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ + +D I T GFRGEALASI+ V+ +E+ T+ HG
Sbjct: 65 MSETDARLAFERHA-TSKI---KEAEDLFSIRTMGFRGEALASIAAVAQVELKTRLHGEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + + GSK + ++ V G+ + ++LF+N P RR++++++ ++ H V
Sbjct: 121 LGTKIEIAGSKV------ESQEQVTCAPGSNFMVKNLFFNVPARRRFLKTNATELRHIVN 174
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ RIAL HP ++F + E + + S+ ++ G S L V +
Sbjct: 175 E-FQRIALAHPSIAFSLVHNE---QTIFNLPPSNLRQRILGVIGTHANSMLLPVETDTSI 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++I GY+ P + QY ++N+RY+ HK + +++
Sbjct: 231 VKIKGYVGKPRSARKTMGDQYFFVNNRYMRSPYFHK---AVMVAYE-------------- 273
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
++ CP Y L + D+ P KT + F+D V + A+R A K
Sbjct: 274 NLVPAEHCPPYFLYFEVDPQIIDVNIHPTKTEIKFEDERAVWKIVVAAVREALGKFNMVP 333
Query: 359 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKN 393
S +D + AE+ + S + + + +H +P N
Sbjct: 334 S--IDFYDAAEVQIPSVQKEGPVTEPTVHINPEYN 366
>gi|20334706|gb|AAM16278.1| MutL-like protein 3 [Mus musculus]
Length = 338
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 180/346 (52%), Gaps = 19/346 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L + VEEL NS+DA AT V + V + V+V+D+G G+
Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRP 122
+ D + +G R+ TSK + D+++ +GFRGEALASI+D++ +EI +K +
Sbjct: 62 AGDDVEKVGNRY-FTSKCHSVRDLENP---AFYGFRGEALASIADMAGAVEISSKKNTTL 117
Query: 123 NGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 118 KTFVKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSM--DPRLEFEKVRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E+ E
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEF 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNG 294
SGYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVL 340
RS S+ Y++N++CP YD+ +P KT + + W+ VL
Sbjct: 294 --PRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIELQSWDTVL 337
>gi|403264965|ref|XP_003924730.1| PREDICTED: DNA mismatch repair protein Mlh3 [Saimiri boliviensis
boliviensis]
Length = 1461
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 182/354 (51%), Gaps = 19/354 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV+ +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQNGKALKACEADVTRPSAGTTVIVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREISFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNG 294
GYISS ++ K Q++++N R + + +HKL++ L S C S S + N+
Sbjct: 236 CGYISS--EAHYNKNMQFLFVNKRLILRTKLHKLIDFLLRKESIICKPKNGSSSRQMNSS 293
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 --PRPRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 132/294 (44%), Gaps = 49/294 (16%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1166 VDVSSGQAESLAVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1225
Query: 1186 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1236
L V +DQHAA ER+RLE+L + G G+ + L E+ + E +LL+
Sbjct: 1226 LLVLVDQHAAHERVRLEQLINDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLRC 1285
Query: 1237 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1285
+ + ++D G + + S S + N L+R + +T V +
Sbjct: 1286 YHKNLEDLG-LEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSMVEELIR--- 1341
Query: 1286 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1345
+ +E LQ G P +V +VL S+AC GA+ F D L E ++E L
Sbjct: 1342 ---EQVELLQTTGGIQG--LLPLTVQKVLASQACHGAVKFNDGLSLEESCRLIEALSLCQ 1396
Query: 1346 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1393
L FQCAHGRP+ +PL +++ L ++ +A+L ++ W + E +++
Sbjct: 1397 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLAKLRKMAQAWRLFGKAECDTRQS 1450
>gi|402876737|ref|XP_003902112.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3
[Papio anubis]
Length = 1456
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 183/356 (51%), Gaps = 23/356 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRPSGGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKQFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R V + +HKL++ L S C K NG +
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIIC----KPKNGSTSRQ 289
Query: 300 RSKS---QACP----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
S S ++ P Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 290 MSSSLRHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 127/288 (44%), Gaps = 49/288 (17%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1161 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDSKFIACLMSTKTEENGEAGGN 1220
Query: 1186 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1236
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1221 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1280
Query: 1237 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1285
+ + ++D G + S S + N L+R + +T V
Sbjct: 1281 YHKNLEDLGLEL-VFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR--- 1336
Query: 1286 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1345
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1337 ---EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIETLSSCQ 1391
Query: 1346 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1387
L FQCAHGRP+ +PL +++ L ++ +A+L ++ W + E
Sbjct: 1392 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLAKLRKMAQAWRLFGKAE 1439
>gi|376261286|ref|YP_005148006.1| DNA mismatch repair protein MutL [Clostridium sp. BNL1100]
gi|373945280|gb|AEY66201.1| DNA mismatch repair protein MutL [Clostridium sp. BNL1100]
Length = 665
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 175/338 (51%), Gaps = 31/338 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
MG I L E N + +G V+ VV+ELV NS+DAGAT + V + G+ Y+K+
Sbjct: 1 MGRIIVLDENTSNKIAAGEVVEKPASVVKELVENSIDAGATSISVDIKNGGI--SYIKIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+GSG+ D + + ERH ATSK+ D+D + T GFRGEALASI+ V+ +E++TK
Sbjct: 59 DNGSGMDEDDVEIAFERH-ATSKIKRAEDLD---SVITMGFRGEALASIASVASVELMTK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G +KG ++ + VGTT + +DLF+N P R K+++ + + +
Sbjct: 115 TAASTYGMYVHIKGG--VFQDVRQTGCPVGTTFIIKDLFFNTPARYKFLKKDSTEAGY-I 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ RIAL +P +SFK + ++ L+ T ++ +++ S +G E L V D
Sbjct: 172 SDTISRIALGNPDISFKLTNGKT--TLIHTPGNNDLKSVIYSIYGKEIIKDLVAVEYADE 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
++ISGY+ P + S + +Q +YIN RYV KL+++ +A + L
Sbjct: 230 KIKISGYVGKPEAARSNRNYQSLYINKRYVK----SKLVSY--------SVEQAFSSILM 277
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD 335
R P ++LN+ L D P KT V F D
Sbjct: 278 KNR-----FPFFVLNIDINPVLVDANVHPAKTEVRFAD 310
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 22/211 (10%)
Query: 1164 LEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQE 1223
L D K + Q +I + + L ++DQHAA ERI E+LR K S E + +
Sbjct: 474 LADMKYIGQAFSTYILLQSNDELVMVDQHAAHERIIYEKLRTKYDSQENTT--------Q 525
Query: 1224 LVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV 1283
L+L + QL + IK + N F N I + +P + G
Sbjct: 526 LLLEPVVIQLQPFELDAIKTKHELLNGIGFVFEDFGNN---------SIIIRGIPYMVG- 575
Query: 1284 NLSDVDL-LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELK 1342
+ S D+ +E Q+L ++ +TP + ++++ AC+ AI L E ++ EL
Sbjct: 576 DCSPRDIFIELTQKLQESIKPVSTPLAD-EIIHTIACKAAIKANKKLDEKEVHQLLTELS 634
Query: 1343 QTSLCFQCAHGRPTTVPLVN--LEALHKQIA 1371
T + C HGRPT + L +E + K+I
Sbjct: 635 NTGRRYTCPHGRPTVIRLTKYEIEKMFKRIV 665
>gi|312866835|ref|ZP_07727048.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus parasanguinis F0405]
gi|311097618|gb|EFQ55849.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus parasanguinis F0405]
Length = 647
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 174/354 (49%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 1 MSQIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIIVEIEEAGLKSIRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI++D + L RHA TSK+ AD+ I T GFRGEA+ SI+ VS+L ++T
Sbjct: 61 GEGIAQDEVALALRRHA-TSKIKSQADL---FRIRTLGFRGEAMPSIASVSILTLLTAQE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V KG + ++ VGT + DLF+N P R KY++S ++ H V
Sbjct: 117 GAAHGTKLVAKGGEI--EEVEPATSPVGTKITVEDLFFNTPARLKYLKSQQAELSHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D
Sbjct: 174 ILNRLSLAHPEIAFTLIN--DGKEMTKTAGTGNLRQAIAGVYGLASAKKMVAIENRDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E++G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EVTGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P ++N++ L D+ P K V ++A I +AI +A
Sbjct: 273 GSKLMVGRFPLAIINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIANAL 326
>gi|404448306|ref|ZP_11013299.1| DNA mismatch repair protein MutL [Indibacter alkaliphilus LW1]
gi|403765927|gb|EJZ26802.1| DNA mismatch repair protein MutL [Indibacter alkaliphilus LW1]
Length = 627
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 179/370 (48%), Gaps = 42/370 (11%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
I+ LP+A+ N + +G V+ ++EL+ N++DAGA+KV V V ++V+DDG
Sbjct: 4 VIHLLPDAIANQIAAGEVVQRPASALKELLENAIDAGASKVQVLVKDAGKALIQVIDDGK 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+S + ERHA TSK+ + DD I TFGFRGEALASI+ V+ +E+ T+ G
Sbjct: 64 GMSMTDARMSFERHA-TSKI---KNSDDLFSIRTFGFRGEALASIAAVAQVEMKTRQKGE 119
Query: 122 PNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++GS+ ++++ GT + ++LF+N P RR +++S+P ++ H
Sbjct: 120 ELGTIIQVEGSEV-------KKQEPAACPEGTCISMKNLFFNVPARRNFLKSNPVEMRHL 172
Query: 177 VKKCVLRIALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
V + R+AL +P++ F I DME L S ++ FG L
Sbjct: 173 VDE-FQRVALSYPEIGFTMIQNDME-----LFNLSPGKLSQRIVGIFGKSYQGQLVACQE 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
+ L I GYI P ++ + QY ++N+RY+ +H + H A G
Sbjct: 227 DSPHLNIKGYIGKPENAKKTRGEQYFFVNNRYIKSNYLHHAVTH------------AYEG 274
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
+ + P Y+L L + D+ P KT + F D V A I A++ A
Sbjct: 275 LMSADMN-----PFYVLFLEIDPTHIDINVHPTKTEIKFDDERTVYAVIRSAVKQALGAH 329
Query: 355 IAHDSFDVDM 364
+ + D M
Sbjct: 330 LVVPTLDFSM 339
>gi|383873221|ref|NP_001244712.1| DNA mismatch repair protein Mlh3 [Macaca mulatta]
gi|380811732|gb|AFE77741.1| DNA mismatch repair protein Mlh3 isoform 1 [Macaca mulatta]
Length = 1456
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 183/356 (51%), Gaps = 23/356 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQSGKALKACEADVTRPSGGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKQFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R V + +HKL++ L S C K NG +
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIIC----KPKNGSTSRQ 289
Query: 300 RSKS---QACP----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
S S ++ P Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 290 MSSSLRHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 127/288 (44%), Gaps = 49/288 (17%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1161 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDSKFIACLMSTKTEENGEAGGN 1220
Query: 1186 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1236
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1221 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1280
Query: 1237 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1285
+ + ++D G + S S + N L+R + +T V
Sbjct: 1281 YHKNLEDLGLEL-VFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR--- 1336
Query: 1286 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1345
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1337 ---EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIETLSSCQ 1391
Query: 1346 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1387
L FQCAHGRP+ +PL +++ L ++ +A+L ++ W + E
Sbjct: 1392 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLAKLRKMAQAWRLFGKAE 1439
>gi|355693448|gb|EHH28051.1| hypothetical protein EGK_18388 [Macaca mulatta]
Length = 1541
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 183/356 (51%), Gaps = 23/356 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 96 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 155
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 156 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 211
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 212 KTFVKLFQSGKALKACEADVTRPSGGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 269
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 270 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKQFEL 329
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R V + +HKL++ L S C K NG +
Sbjct: 330 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIIC----KPKNGSTSRQ 383
Query: 300 RSKS---QACP----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
S S ++ P Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 384 MSSSLRHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 439
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 127/288 (44%), Gaps = 49/288 (17%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1222 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDSKFIACLMSTKTEENGEAGGN 1281
Query: 1186 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1236
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1282 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1341
Query: 1237 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1285
+ + ++D G + S S + N L+R + +T V
Sbjct: 1342 YHKNLEDLGLEL-VFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR--- 1397
Query: 1286 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1345
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1398 ---EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIETLSSCQ 1452
Query: 1346 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1387
L FQCAHGRP+ +PL +++ L ++ +A+L ++ W + E
Sbjct: 1453 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLAKLRKMAQAWRLFGKAE 1500
>gi|291519453|emb|CBK74674.1| DNA mismatch repair protein MutL [Butyrivibrio fibrisolvens 16/4]
Length = 632
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 186/355 (52%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
MG IN L + + + +G V+ V +EL+ NS+DAGAT + V + G Y+++ D+
Sbjct: 1 MGKINLLSQETIDKIAAGEVVERPASVAKELIENSIDAGATAISVEIKGGGIEYLRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI +D + + RH+ TSK+ D+D+ + + GFRGEAL+SIS VS +E+ITK
Sbjct: 61 GSGIDKDQIQIAFLRHS-TSKISSAVDLDN---VRSLGFRGEALSSISAVSKVELITKTK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +++G+K + L D GTT + R LFYN P R+K+++S + + V
Sbjct: 117 DSLLGASYIIEGAKEISL--TDVGAPDGTTFIVRQLFYNTPARKKFLKSESTEGSY-VFD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +AL HP++SFKF + + E L T + + + +G + S + ++ D +
Sbjct: 174 VVEHLALSHPEISFKF--LVNGKEKLMTSGNGTLSDTIYQIYGRQIASNVLDIEYVDEKV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I+G+I + +AF++ ++NSRY+ N+L+ + C + + GFL G
Sbjct: 232 SITGFIGQSVIARGNRAFEHFFVNSRYIKS-------NNLSRA--CEEGYY---GFLMGH 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
+ P +++N+ S D+ P K V F++ V + + I ++
Sbjct: 280 Q-----YPFFVINIAFTDSAVDVNVHPTKQEVRFENESEVCQLLTKTINQRLRRR 329
Score = 46.6 bits (109), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 24/203 (11%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
+NK +++ K++ QV + V + +IDQHAA E++ E+ ++ + + S +
Sbjct: 436 LNKEAVKEHKIIGQVFDTYWIVEYDKNMYIIDQHAAHEKVLFEKTMARLKNNQMTS-QMI 494
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
+ L L +N+ E + G+ SF N LA+
Sbjct: 495 SPPVIVSLSPQDVLLFENYREAFEKLGYRV-------ESFGGNE------------LAIN 535
Query: 1279 CIFGVNLSDVDLLEF-LQQLADTDG--SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1335
I G NL ++D F L+ LAD +S + ++ + S +C+ A+ + L E
Sbjct: 536 GIPG-NLLNLDPKAFFLEVLADCQSYKASDSFDMIIERVASMSCKAAVKGNNRLSIPEIK 594
Query: 1336 LIVEELKQTSLCFQCAHGRPTTV 1358
++++L + + C HGRPT +
Sbjct: 595 TLIDDLLELENPYHCPHGRPTMI 617
>gi|127511498|ref|YP_001092695.1| DNA mismatch repair protein [Shewanella loihica PV-4]
gi|189030413|sp|A3QAD8.1|MUTL_SHELP RecName: Full=DNA mismatch repair protein MutL
gi|126636793|gb|ABO22436.1| DNA mismatch repair protein MutL [Shewanella loihica PV-4]
Length = 631
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 182/359 (50%), Gaps = 44/359 (12%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ V++ELV NS+DAGAT+V + + +K+ D+GS
Sbjct: 2 TIRILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIDKGGSKLIKITDNGS 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI ++ L L RHA TSKL L D+D I +FGFRGEALASIS VS L + ++ +
Sbjct: 62 GIPKEELSLALSRHA-TSKLASLDDLD---AILSFGFRGEALASISSVSRLTLTSRTQEQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++ +GS+ + + + VG+TV + DLF+N P RR++++S + H + + +
Sbjct: 118 SEAWQAYAEGSE-MAVRVIPAAHPVGSTVEAADLFFNTPARRRFLKSDKTEFTH-IDEWL 175
Query: 182 LRIALVHPKVSF----------KFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE 231
RIALV ++ F + ++E + L + S A ++
Sbjct: 176 KRIALVRSEIHFTLKHNGKQVRNYRPAKTEAQYLQRLAQVSGKAFADNAL---------R 226
Query: 232 VNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 291
V+ N L +SGYI SP+ ++V QY Y+N R V +L+NH +A
Sbjct: 227 VDCNHNGLSLSGYIQSPFSEMAVGDTQYFYVNGRLVRD----RLVNHAVR--------QA 274
Query: 292 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
L+G+ Q +LNL PH + D+ P K V F + V FI +A+ SA
Sbjct: 275 FAQQLQGE----QVAFVLMLNLD-PHQV-DVNVHPAKHEVRFHESRYVHDFILQALESA 327
>gi|387880489|ref|YP_006310792.1| DNA mismatch repair protein [Streptococcus parasanguinis FW213]
gi|386793937|gb|AFJ26972.1| DNA mismatch repair protein [Streptococcus parasanguinis FW213]
Length = 667
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 173/354 (48%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 21 MSQIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIIVEIEEAGLKSIRITDN 80
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ AD+ I T GFRGEA+ SI+ VS+L ++T
Sbjct: 81 GEGIAHDEVALALRRHA-TSKIKSQADL---FRIRTLGFRGEAMPSIASVSILTLLTAQE 136
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V KG + L + VGT + DLF+N P R KY++S ++ H V
Sbjct: 137 GAAHGTKLVAKGGEIEEL--EPATNPVGTKITVEDLFFNTPARLKYLKSQQAELSHIV-D 193
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D
Sbjct: 194 ILNRLSLAHPEIAFTLIN--DGKEMTKTAGTGNLRQAIAGVYGLASAKKMVAIENRDLDF 251
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E++G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 252 EVTGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 292
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P ++N++ L D+ P K V ++A I +AI +A
Sbjct: 293 GSKLMVGRFPLAIINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIANAL 346
>gi|355778739|gb|EHH63775.1| hypothetical protein EGM_16809 [Macaca fascicularis]
Length = 1364
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 183/356 (51%), Gaps = 23/356 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 46 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 105
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 106 GSDDVEKVGNRY-FTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTM 161
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 162 KTFVKLFQSGKALKACEADVTRPSGGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRI 219
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 220 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKQFEL 279
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R V + +HKL++ L S C K NG +
Sbjct: 280 SGYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIIC----KPKNGSTSRQ 333
Query: 300 RSKS---QACP----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
S S ++ P Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 334 MSSSLRHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 389
Score = 48.1 bits (113), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 15/79 (18%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1172 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDSKFIACLMSTKTEENGEAGGN 1231
Query: 1186 LAV-IDQHAADERIRLEEL 1203
L V +DQHAA ERIRLE+L
Sbjct: 1232 LLVLVDQHAAHERIRLEQL 1250
>gi|405120339|gb|AFR95110.1| Mlh3p [Cryptococcus neoformans var. grubii H99]
Length = 813
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 196/371 (52%), Gaps = 30/371 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC--NCYVKVVD 58
M I LP T+RS +L L ++ EL+ NS+DAGATK+ YV + N ++V D
Sbjct: 1 MPDILPLPHPTSTTLRSSIILPSLAQIFSELLQNSLDAGATKIECYVNMAKGNESLRVED 60
Query: 59 DGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 118
+G+GIS+DGL +G+R TSK H + +G++GFRGEALASI+ +SLL+I T+
Sbjct: 61 NGTGISKDGLAKIGKRF-RTSKEIHEGGLGP---VGSYGFRGEALASIASLSLLDITTRR 116
Query: 119 HGRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
P Y K++K SK L+ G + +R GTTVV R++F PVRR+ + ++ +L
Sbjct: 117 ASFPV-YTKILKHSKTLFEGPNPDRHISGGQGTTVVVREIFRTIPVRREELAATSSTLLM 175
Query: 176 S-VKKCVLRIALVHPKVSFKFIDMESE-----DELLCTCSSSSPLALLISSFGIEDFSFL 229
+ +KK V +AL + V + + + ++ +S S L + + +G +
Sbjct: 176 TQLKKVVETLALGNTGVRWVLWEERTTTTGGLKRIVGINASDSSLDVFKALYGSALVQSV 235
Query: 230 DEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSW 289
+ G +++G+IS D KA Q++Y+N+ + +G +H + AS ++
Sbjct: 236 QRIRVTVGEKKVNGFISISGD--VSKAHQHLYVNNYPIDRGDVHTAIAKKFASSKFANLA 293
Query: 290 KAN------NGFLKGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEP--- 338
A + G+RS + + P Y+LN+ P D++++P K + +KD E
Sbjct: 294 SAGQHDKDEDYHPSGRRSPRRLERYPIYVLNVTLPAGELDVSYEPQKGILGYKDIETLKT 353
Query: 339 -VLAFIERAIR 348
+LA ++ +R
Sbjct: 354 MLLAVVDEFLR 364
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 117/245 (47%), Gaps = 40/245 (16%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGT-----LAVIDQHAADERIRLEELRHKVLSGEGK 1213
I+KS L +A VL QVD+KFI VV T LA+IDQHAADER+ +E++ ++ G +
Sbjct: 533 ISKSSLSNATVLGQVDRKFIAVVLRTTINLTTLALIDQHAADERVAVEKVLLELCKGFAR 592
Query: 1214 S---VAYL-DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNK--------- 1260
VA L A ++L + Q+L Q W ++ S +
Sbjct: 593 DDLLVADLTKARPMIILTQAEAQILSQPGVQPLFMRWGVHLTMPPGLSHGEYVQVKVEAV 652
Query: 1261 NLNLLQR-------QITVITLLAVPCIFGVNLSDVDLLEFLQ--QLADTDGSST------ 1305
L+LL R ++T + +P + L+E L+ + D +G
Sbjct: 653 PLSLLNRLGRKEGLEMTRLVRGYLPIVADHAGEITALVENLEGKAMEDNEGGDIEGYGGD 712
Query: 1306 -------TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1358
P +L + NSKACRGAIMF D L +C ++++L +T F CAHGRP+ V
Sbjct: 713 WGRVMRFMPREMLELANSKACRGAIMFEDRLSHDQCDRLIQQLSRTRFPFMCAHGRPSMV 772
Query: 1359 PLVNL 1363
PLV L
Sbjct: 773 PLVIL 777
>gi|326202165|ref|ZP_08192035.1| DNA mismatch repair protein MutL [Clostridium papyrosolvens DSM
2782]
gi|325987960|gb|EGD48786.1| DNA mismatch repair protein MutL [Clostridium papyrosolvens DSM
2782]
Length = 664
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 179/354 (50%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
MG I L E N + +G V+ VV+ELV NS+DAGAT + V + G+ Y+K+
Sbjct: 1 MGRIIVLDENTSNKIAAGEVVEKPASVVKELVENSIDAGATSISVDIKNGGI--SYIKIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+GSG+ D + + ERH ATSK+ D+D + T GFRGEALASI+ V+ +E++TK
Sbjct: 59 DNGSGMDEDDVEIAFERH-ATSKIKRAEDLD---SVITMGFRGEALASIASVASVELMTK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G ++G ++ + VGTT + +DLF+N P R K+++ + + +
Sbjct: 115 TAASTYGMYVHIRGG--VFQDVRQTGCPVGTTFIIKDLFFNTPARYKFLKKDSTEAGY-I 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ RIAL +P +SFK + ++ L+ T ++ +++ S +G E L V D
Sbjct: 172 SDTISRIALGNPDISFKLTNGKT--TLIHTPGNNDLKSVIYSIYGKELIKDLVAVEYADE 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
++ISGY+ P + S + +Q +YIN RYV + S+ ++ + L
Sbjct: 230 KIKISGYVGKPEAARSNRNYQSLYINKRYVKSKMV---------SYSVEQAFTS---ILM 277
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
R P ++LN+ L D P KT V F D + I A+ +A
Sbjct: 278 KNR-----FPFFVLNIDINPVLVDANVHPAKTEVRFADESNLSRTIYMAVSNAL 326
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 1164 LEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQE 1223
L D K + Q +I + + L ++DQHAA ERI E+LR K S E + +
Sbjct: 473 LADMKYIGQAFSTYILLQSNDELVMVDQHAAHERIIYEKLRVKFDSQENTT--------Q 524
Query: 1224 LVLPEIGYQL-------LQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
L+L + QL +++ E +K G++ F N I +
Sbjct: 525 LLLEPVVIQLQPFELDAVKSKHELLKGIGFVF-------EDFGNN---------SIIIRG 568
Query: 1277 VPCIFGVNLSDVDL-LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1335
+P + G + S D+ +E Q+L ++ +TP + ++++ AC+ AI L E
Sbjct: 569 IPYMVG-DCSPRDIFIELTQKLQESIRPVSTPLAD-EIIHTIACKAAIKANKKLDEKEVH 626
Query: 1336 LIVEELKQTSLCFQCAHGRPTTVPLVN--LEALHKQIA 1371
++ EL +T + C HGRPT + L +E + K+I
Sbjct: 627 QLLIELSKTGRRYTCPHGRPTVIRLTKYEIEKMFKRIV 664
>gi|322390454|ref|ZP_08063974.1| DNA mismatch repair protein HexB [Streptococcus parasanguinis ATCC
903]
gi|321142853|gb|EFX38311.1| DNA mismatch repair protein HexB [Streptococcus parasanguinis ATCC
903]
Length = 686
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 173/354 (48%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 40 MSQIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIRITDN 99
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ AD+ I T GFRGEA+ SI+ VS+L ++T
Sbjct: 100 GEGIAHDEVALALRRHA-TSKIKSQADL---FRIRTLGFRGEAMPSIASVSILTLLTAQE 155
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V KG + ++ VGT + DLF+N P R KY++S ++ H V
Sbjct: 156 GAAHGTKLVAKGGEI--EEVEPATSPVGTKITVEDLFFNTPARLKYLKSQQAELSHIV-D 212
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D
Sbjct: 213 ILNRLSLAHPEIAFTLIN--DGKEMTKTAGTGNLRQAIAGVYGLASAKKMVAIENRDLDF 270
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E++G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 271 EVTGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 311
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P ++N++ L D+ P K V ++A I +AI +A
Sbjct: 312 GSKLMVGRFPLAIINIKIDPYLADVNVHPTKQEVRISKERELMALISQAIANAL 365
>gi|392568483|gb|EIW61657.1| hypothetical protein TRAVEDRAFT_163075 [Trametes versicolor
FP-101664 SS1]
Length = 886
Score = 147 bits (370), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 183/378 (48%), Gaps = 36/378 (9%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGS 61
G I LP + ++ +RS +L L +++ ELV NS+DA A V V + V DDG+
Sbjct: 15 GHITYLPSSTQSQLRSTQILTSLPQIISELVQNSLDANAHSVDVTLDPAEWECSVRDDGA 74
Query: 62 GISRDGLVLLG----ERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
GISRDGL +L + TSK A +D+ T TFGFRGEALAS +D++ LEI ++
Sbjct: 75 GISRDGLTVLAGGSQDGRYGTSKAYTPASLDEVT---TFGFRGEALASAADIACLEISSR 131
Query: 118 -AHGRPNGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
AH R + ++KG + L+ G I R+ GT V RD FYN P+RR+ ++ + +
Sbjct: 132 TAHSR-ESWSVILKGGQLLFAGPSIRWRREAPGTVVSIRDAFYNLPIRRRSHPNA-SRTI 189
Query: 175 HSVKKCVLRIALVHPKVSFKFID---------MESEDELLCTCSSSSPLALLISSFGIED 225
VK+ V ALV P VSF + S+ +L ++S LA +G
Sbjct: 190 ELVKREVEAFALVFPNVSFSLENARKDKAGTLARSKARVLTVPKTASTLAAFRHIYGKAL 249
Query: 226 FSFLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDC 285
++E+ + + G++S KA+Q++YIN + +H+ H+ A +
Sbjct: 250 ADEVEEIEEQCDGMRLEGFVS--LQGAYSKAYQFLYINKHPMATCDLHR---HIEAVYSR 304
Query: 286 S--------DSWKANNGFLKGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD 335
S + K N+ +RS K++ Y+LNL P D +P K V ++
Sbjct: 305 SSFNKHALEELGKTNDLTSSVRRSPRKAEKKAVYVLNLTIPPRFVDNCIEPAKAAVQLQN 364
Query: 336 WEPVLAFIERAIRSAWMK 353
+F+ I +K
Sbjct: 365 SSATASFLSSTIERVLLK 382
Score = 70.5 bits (171), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 44/57 (77%)
Query: 1307 PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
P ++ ++NSKACRGAIMF D+L +C ++++L T+L FQCAHGRP+ VPLV++
Sbjct: 807 PRELVELVNSKACRGAIMFNDTLTLEQCKNLLDKLSGTALPFQCAHGRPSLVPLVDV 863
>gi|160892635|ref|ZP_02073425.1| hypothetical protein CLOL250_00165 [Clostridium sp. L2-50]
gi|156865676|gb|EDO59107.1| DNA mismatch repair domain protein [Clostridium sp. L2-50]
Length = 681
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 178/352 (50%), Gaps = 27/352 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I L + + + +G V+ V++ELV NS+DAGAT + + + ++++ D+G G
Sbjct: 2 IKLLDQYTIDKIAAGEVIERPGSVIKELVENSIDAGATAITIEIKEGGMSFIRITDNGCG 61
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
IS++ + + RHA TSKL DD I + GFRGEAL+SI+ V+ +E+ITK
Sbjct: 62 ISKEEVPVAFLRHA-TSKL---QTADDLLKIASLGFRGEALSSIAAVAQVELITKQEDAL 117
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G R + G K + ++ +GTT+V R+LFYN P R+K+M+ +P + V
Sbjct: 118 TGTRYQIHGGK--EISNEEIGAPLGTTIVVRNLFYNTPARKKFMK-TPATEGSYIYDLVC 174
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+A+ HP VSFKFI M D+L T + ++ +G + + L E+NA + ++I+
Sbjct: 175 RMAMSHPDVSFKFI-MNGTDKLF-TSGNGRLKEIIYHIYGRDITNNLLEINAANDQVKIT 232
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GY++ P S ++F+ Y+N RY+ + K + +F +
Sbjct: 233 GYLAKPSISRGNRSFEDYYVNQRYIKSNILTKAIEDAYRTFVMVHKF------------- 279
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P ++N SL D+ P K + F + + F ++R A + K
Sbjct: 280 ----PFTVINFEIDPSLIDVNIHPAKRELKFINEPDMYDFTYISVRKALLFK 327
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 20/178 (11%)
Query: 1188 VIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWI 1247
++DQHAA E+++ EEL + YL + L + L+ E ++ G+
Sbjct: 514 IMDQHAAHEKVKFEELMAN-YKNKTAIPQYLMPPAIVSLSGTESEFLRENLEFFQNLGF- 571
Query: 1248 CNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLSDVDLLEFLQQLADTDGSSTT 1306
I G + + L AVP +FG++ ++ LEF+ +L++ +G T
Sbjct: 572 -QIEGFGGKEYK--------------LSAVPANLFGLDGREL-FLEFIGELSE-NGQKQT 614
Query: 1307 PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
+ + L++ AC+ AI S+ E ++++L + + C HGRPT + + E
Sbjct: 615 IDTFISKLSTMACKAAIKGNTSISFKEADTLIDQLMKLENPYTCPHGRPTLISMTETE 672
>gi|422883113|ref|ZP_16929562.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK49]
gi|332363705|gb|EGJ41485.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK49]
Length = 698
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 221/470 (47%), Gaps = 60/470 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 51 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 110
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 111 GEGIAHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 166
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 167 AGQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 221
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 222 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 278
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 279 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 319
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 320 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ 379
Query: 355 IAHDSFDVDMLEDAELPLESSRF----QSHQSSTHLHSSPLKNLAKQRDHMFHKEC--ER 408
D++ DA L S +S Q+S L + L +Q D + ++
Sbjct: 380 --------DLIPDALENLAKSTVKRANKSEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQ 431
Query: 409 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
++F+E +PV A + ++P S+S+ FAE P+ ++DH
Sbjct: 432 LSFEE-SAEPVHEATDEK-----AEPPQSTSV---KFAERKPVSYDQLDH 472
>gi|134111188|ref|XP_775736.1| hypothetical protein CNBD4650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258400|gb|EAL21089.1| hypothetical protein CNBD4650 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 812
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 196/371 (52%), Gaps = 30/371 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC--NCYVKVVD 58
M I LP T+RS +L L ++ EL+ NS+DA ATK+ YV + N ++V D
Sbjct: 1 MPNILPLPRPTSTTLRSSIILPSLAQIFSELLQNSLDAEATKIECYVNLAKGNETLRVED 60
Query: 59 DGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 118
+G+GIS++GL +G+R TSK H + +G++GFRGEALASI+ +SLL+I T+
Sbjct: 61 NGTGISKNGLAKIGKRFR-TSKEIHEGGLGP---VGSYGFRGEALASIASLSLLDITTRR 116
Query: 119 HGRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
P Y K+++ SK L+ G + +R GTTVV R++F PVRR+ + ++ +L
Sbjct: 117 ASFPV-YTKILRHSKTLFEGPNPDRHIAGGQGTTVVVREIFRTIPVRREELAATSSTLLM 175
Query: 176 S-VKKCVLRIALVHPKVSFKFIDMESE-----DELLCTCSSSSPLALLISSFGIEDFSFL 229
S +KK V +AL +P V + + ++ ++ +S S L + + +G +
Sbjct: 176 SQLKKVVETLALGNPGVRWVLWEEKTTTTGGLKRIMSINASDSALDVFKTLYGGALVQSV 235
Query: 230 DEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSW 289
++ G ++ G+IS D KA Q++YIN+ + +G +H + AS ++
Sbjct: 236 QKIKVTAGKRKVDGFISISGD--VSKAHQHLYINNYPIDRGDVHTAIAKKFASSKFANLA 293
Query: 290 KAN------NGFLKGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEP--- 338
A + G+RS + + P Y+LN+ D++++P K + +KD E
Sbjct: 294 SAGQHDEDEDYHPSGRRSPRRLERYPVYVLNVTLSAGELDVSYEPQKGVLGYKDIESLKT 353
Query: 339 -VLAFIERAIR 348
+LA ++ +R
Sbjct: 354 MLLAVVDEFLR 364
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 114/249 (45%), Gaps = 48/249 (19%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGG-----TLAVIDQHAADERIRLEELRHKVLSGEGK 1213
I+KS L +A VL QVD+KFI VV TLA+IDQHAADER+ +E++ ++ G K
Sbjct: 533 ISKSSLSNATVLGQVDRKFIAVVLSTNINLTTLALIDQHAADERVAVEKVLLELCEGFAK 592
Query: 1214 SVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVIT 1273
L AE P I +L QI W+ ++ + L + +
Sbjct: 593 D-DLLVAELAKTRPMI---ILTQAEAQILSQPWVLSLFKRWGIRLTMPPGLSHGEYIQVK 648
Query: 1274 LLAVPC-----------------------IFGVNLSDVDLL-EFLQ--QLADTDGSST-- 1305
+ VP I + S++ +L E L+ + D +G T
Sbjct: 649 VETVPLSLLSRLGRKEGSEMTRLVRGYLPIVAEHASEITVLVENLEGKAMEDNEGGDTEG 708
Query: 1306 -----------TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGR 1354
P +L + NSKACRGAIMF D L +C ++++L QT F CAHGR
Sbjct: 709 YGGDWGRLMRFMPREMLELANSKACRGAIMFEDRLSHDQCDRLIQQLSQTRFPFMCAHGR 768
Query: 1355 PTTVPLVNL 1363
P+ VPLV L
Sbjct: 769 PSMVPLVIL 777
>gi|89891567|ref|ZP_01203071.1| DNA mismatch repair protein mutL [Flavobacteria bacterium BBFL7]
gi|89516114|gb|EAS18777.1| DNA mismatch repair protein mutL [Flavobacteria bacterium BBFL7]
Length = 608
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 183/374 (48%), Gaps = 29/374 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGAT++ + V+V+DDG G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATQISLIIKDAGKTLVQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERH ATSK+ + D+ D + T GFRGEALAS++ ++ + + TK
Sbjct: 65 MSMTDARMAFERH-ATSKITNANDLFD---LHTKGFRGEALASVAAIAHVSLKTKREEDD 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++GSK + + GT + R+LFYN P RRK+++S + L ++
Sbjct: 121 LGTFLEIEGSKV--VNQEPVVTTKGTMISVRNLFYNVPARRKFLKSDNVE-LRNITDEFH 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+A+ HP+V KF S D L S+ +++ G + L V ++IS
Sbjct: 178 RVAMAHPQVGLKF---SSNDTELFNLPISNYRQRIVNIMGAKTNEKLVPVEEETELVKIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + K QY ++N R++ H L+H S A G LK K +
Sbjct: 235 GFVGKPEFARKTKGLQYFFVNDRFIK----HNYLHHAVTS--------AFEGLLKEKNN- 281
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P Y L L P D+ P KT V F D + A + +++ A + + + ++ D
Sbjct: 282 ----PTYFLFLDVPKDSVDINIHPTKTEVKFDDEHSLYAIVRASVKHA-LGQFSINAIDF 336
Query: 363 DMLEDAELPLESSR 376
D E+P E ++
Sbjct: 337 DKEPQYEVPYEYTK 350
>gi|309799336|ref|ZP_07693579.1| DNA mismatch repair protein MutL [Streptococcus infantis SK1302]
gi|308117003|gb|EFO54436.1| DNA mismatch repair protein MutL [Streptococcus infantis SK1302]
Length = 464
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 207/463 (44%), Gaps = 45/463 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GYGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEVEE--IIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMVEIENADLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P +++++ L D+ P K V ++A + AI K +
Sbjct: 273 GSKLMVGRFPLAVIHIQIDPYLADVNVHPTKQEVRISKERELMALVSEAI----AKSLKE 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKD 417
+ D LE+ +R + Q++ L + L + E R E
Sbjct: 329 QTLIPDALENLAKSAVRNREKVEQTTLPLRENTL--------YYEKTELTRPPQAEVADH 380
Query: 418 PVELAEENTEMEFFSQPKHSSSLLDGS--FAECLPIVPPKIDH 458
V L EE ++ F++ + FAE PI ++DH
Sbjct: 381 QVNLTEERQDLNLFAKEALDQLIKPAKLHFAERKPISYDQLDH 423
>gi|319946047|ref|ZP_08020296.1| DNA mismatch repair protein HexB [Streptococcus australis ATCC
700641]
gi|417919246|ref|ZP_12562781.1| DNA mismatch repair protein [Streptococcus australis ATCC 700641]
gi|319747855|gb|EFW00100.1| DNA mismatch repair protein HexB [Streptococcus australis ATCC
700641]
gi|342833936|gb|EGU68215.1| DNA mismatch repair protein [Streptococcus australis ATCC 700641]
Length = 649
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 174/357 (48%), Gaps = 31/357 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 1 MSQIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + + L RH ATSK+ AD+ I T GFRGEAL SI+ VS++ I+T
Sbjct: 61 GQGIAHEEVELALRRH-ATSKIKSQADL---FRIRTLGFRGEALPSIASVSVMTILTAQE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + KG + L + VGT + DLF+N P R KYM+S ++ H V
Sbjct: 117 GASHGTKLEAKGGEITSL--EPATSPVGTKITVEDLFFNTPARLKYMKSQQAELSHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D
Sbjct: 174 ILNRLSLAHPEIAFTLIN--DGHEMTRTAGTGNLRQAIAGVYGLATAKKMVAIETGDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E+SG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EVSGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
SK P ++N++ L D+ P K V ++A I +AI SA ++
Sbjct: 273 GSKLMVGRFPIAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIVSALKEQ 329
>gi|301757817|ref|XP_002914774.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Ailuropoda
melanoleuca]
Length = 889
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 183/362 (50%), Gaps = 24/362 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQARLRSGLAICSLGQCVEELALNSLDAEAKCVAVRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDIDKVGNRY-FTSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTG 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 118 KTFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQFPVRRKCM--DPRLEFEKVRQRI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L ++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLAKSQKLRDIKFKYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R + + +HK ++ L S C K NG +
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNKRLILRTKLHKFIDFLLRKESIIC----KPKNGSAARQ 289
Query: 300 -------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
RS + Y++N++C YD+ +P KT + F++W+ VL I+ ++ ++
Sbjct: 290 MNSSPRHRSNPELHGIYVVNMQCRFCEYDVCMEPAKTLIEFQNWDTVLVCIQEGVK-MFL 348
Query: 353 KK 354
KK
Sbjct: 349 KK 350
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 47/287 (16%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1185
+D+SSG L+ P K + +VLQQVD KFI + AGG
Sbjct: 593 VDVSSGQAKSLVVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 652
Query: 1186 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
L V +DQHAA ER+RLE+L R K+LS + + E+ + E
Sbjct: 653 LLVLVDQHAAHERVRLEQLITDSYEKQQPQGSGRKKLLS------SIVSPPLEIRVTEEQ 706
Query: 1231 YQLLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSD 1287
+LL+ + + ++D G I T S + L ++R+ + P +
Sbjct: 707 RRLLRCYHKNLEDLGLEIIFPDTSDSLVLVGKVPLCFVEREANELRRGRSPVTKSIVEEF 766
Query: 1288 V-DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
+ + +E LQ G T P +V +VL S+AC GAI F D L P E ++E L L
Sbjct: 767 IREQVELLQTTGAIQG--TLPLTVQKVLASQACHGAIKFNDGLSPEESCRLIEALSWCQL 824
Query: 1347 CFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1387
FQCAHGRP+ +PL +++ L ++ +A+L ++ WH + E
Sbjct: 825 PFQCAHGRPSMLPLADIDHLEEEKQIKPNLAKLRKMAQAWHLFGKAE 871
>gi|422850576|ref|ZP_16897246.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK150]
gi|325695324|gb|EGD37224.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK150]
Length = 698
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 222/470 (47%), Gaps = 60/470 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 51 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 110
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 111 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 166
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 167 AGQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 221
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 222 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 278
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 279 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 319
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 320 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAISTSLKEQ 379
Query: 355 IAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ER 408
D++ DA L S + Q+S L + L +Q D + ++
Sbjct: 380 --------DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQ 431
Query: 409 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
++F+E DPV + NT+ + ++P S+S+ FAE P+ ++DH
Sbjct: 432 LSFEE-TADPV---QANTDEK--AEPPQSTSV---KFAERRPVSYDQLDH 472
>gi|409079515|gb|EKM79876.1| hypothetical protein AGABI1DRAFT_127557 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 857
Score = 146 bits (369), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 176/381 (46%), Gaps = 32/381 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
+ +L E + +RS +L L ++V ELV NS+DA A + V V V DDGSG
Sbjct: 13 LAKLDEPTQARIRSTQILTTLPQIVSELVQNSLDAKANNISVSVNCAEWMCWVRDDGSGF 72
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDAT-GIGTFGFRGEALASISDVSLLEIITKAHGRP 122
S+ L + E A+ D+T + T+GFRGEALAS + VS LEI ++
Sbjct: 73 SKRDLEIFSEEDASQRYCTSKKYTPDSTNAVSTYGFRGEALASAAQVSCLEIASRTAKAH 132
Query: 123 NGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
+ + K + LY G I R+ GT V RD FYN PVRR K +++
Sbjct: 133 TTWSIIKKAHEVLYQGEAIRWRRESPGTVVCVRDAFYNLPVRR-LSHPPAAKTWELIRQE 191
Query: 181 VLRIALVHPKVSFKFIDMES------EDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
V ALV P V+F D+E + + +SS L+ +G + V+A
Sbjct: 192 VEAYALVSPSVAFVLEDLERNRGSGPDTRTMRIPKTSSILSTFRHLYGRALSERVAIVDA 251
Query: 235 NDGALEISGYIS--------SP-YD------SISVKAFQYVYINSRYVCKGPIHKLLNHL 279
DG + G+IS +P YD S +++ FQ++YINSR V +H+L++
Sbjct: 252 ADGMMRAEGFISLHGASSKVTPNYDLPAVRSSHAIQIFQFLYINSRPVSLCDLHRLIDIQ 311
Query: 280 AA-------SFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVV 332
+ SFD + + K + P Y+LN+ P D FDP KT V
Sbjct: 312 FSSSSFGKNSFDSRNEVGDTQVGTRHSPRKLEMKPVYVLNVLIPSGEVDNGFDPTKTIVA 371
Query: 333 FKDWEPVLAFIERAIRSAWMK 353
KD V++F+ +R +K
Sbjct: 372 LKDKNSVISFLISIVRGFLVK 392
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 118/298 (39%), Gaps = 80/298 (26%)
Query: 1143 SSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFI------------------------ 1178
S+ L H + + I +S L A ++ QVD KFI
Sbjct: 558 SADLQHFSPQRSISGFYTRSDLVTATIVGQVDLKFIACLIPTHDYGHGEAESTLPNEVAI 617
Query: 1179 PVVAGGTLAVIDQHAADERIRLEELRHKVLSG-----EGKSVAYLDAEQELVLPE----I 1229
P TL +IDQHAADERIR+E ++ G +GK+ E + P +
Sbjct: 618 PNHDALTLVLIDQHAADERIRVEAFLEELCLGFLNNRDGKADPTRRIELRTLAPPKPVLV 677
Query: 1230 GYQLLQNFAEQ------IKDWGW-ICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFG 1282
+ L+ E ++WG + T GS S R + + A+P I
Sbjct: 678 TWHELRTLQESKEIQEAFQNWGIHLAGYSTPGSGSERLIHESDNRTFAQVLVEAIPEIIS 737
Query: 1283 VNLSDVDLLE-----FLQQLADTDGSSTTPPS-----------------------VLRVL 1314
L D L+ FL QL + SS + P+ +L ++
Sbjct: 738 DKLLQEDELQNLVKGFLAQLQEDLPSSFSSPNPDQTQRHGEEFVWLKALRYCPKPLLNLI 797
Query: 1315 NSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQ 1372
NSKACRGAIMF DSL +C + CAHGRP+ VPLV L + + + Q
Sbjct: 798 NSKACRGAIMFNDSLSRMQCESL------------CAHGRPSLVPLVELGSPTRNLGQ 843
>gi|422847752|ref|ZP_16894435.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK72]
gi|325686750|gb|EGD28776.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK72]
Length = 698
Score = 146 bits (369), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 218/470 (46%), Gaps = 60/470 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 51 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 110
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 111 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 166
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 167 AGQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 221
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E++ T S + + +G+ + E++A+D
Sbjct: 222 V-DVINRLSLAHPEVAFTLIS--DGREMIRTAGSGNLRQAIAGIYGLATAKKMVEISASD 278
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 279 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 319
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 320 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ 379
Query: 355 IAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ER 408
D++ DA L S + Q+S L + L +Q D + ++
Sbjct: 380 --------DLIPDALENLAKSTVKRANKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQ 431
Query: 409 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
++F+E K +E TE P S+S+ FAE P+ ++DH
Sbjct: 432 LSFEESAKPFQANTDEKTE------PPQSTSV---KFAERRPVSYDQLDH 472
>gi|417936962|ref|ZP_12580268.1| DNA mismatch repair protein [Streptococcus infantis X]
gi|343399404|gb|EGV11926.1| DNA mismatch repair protein [Streptococcus infantis X]
Length = 649
Score = 146 bits (368), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 199/436 (45%), Gaps = 43/436 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMVEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P +++++ L D+ P K V ++A + AI K +
Sbjct: 273 GSKLMVGRFPLAVIHIQIDPYLADVNVHPTKQEVRISKERELMALVSEAI----AKSLKE 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKD 417
+ D LE+ +R + Q++ L + L + E R T E
Sbjct: 329 QTLIPDALENLAKSAVRNREKVEQTTLPLRENTL--------YYEKNEPTRPTQAEVADH 380
Query: 418 PVELAEENTEMEFFSQ 433
V L EE ++ F++
Sbjct: 381 QVNLTEEKQDLNLFAK 396
>gi|417794112|ref|ZP_12441375.1| DNA mismatch repair protein [Streptococcus oralis SK255]
gi|334271222|gb|EGL89616.1| DNA mismatch repair protein [Streptococcus oralis SK255]
Length = 649
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 209/463 (45%), Gaps = 45/463 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+EL+ N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELIENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++A + AI K +
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAI----AKSLKE 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKD 417
+ D LE+ +R + Q++ L + L + E R T E
Sbjct: 329 QTLIPDALENLAKSTVRNREKVEQTTLPLKENTL--------YYEQTEVTRPTQVEVSDH 380
Query: 418 PVELAEENTEMEFFSQPK--HSSSLLDGSFAECLPIVPPKIDH 458
V+L EE ++ F++ + FAE P+ ++DH
Sbjct: 381 QVDLTEERQDLTLFAKETLDQLTKPAKLHFAERKPVSYDQLDH 423
>gi|414156450|ref|ZP_11412752.1| DNA mismatch repair protein mutL [Streptococcus sp. F0442]
gi|410870097|gb|EKS18056.1| DNA mismatch repair protein mutL [Streptococcus sp. F0442]
Length = 647
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 174/354 (49%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 1 MSQIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEA+ SI+ VS+L ++T
Sbjct: 61 GEGIAHDEVALALRRHA-TSKIKNQADL---FRIRTLGFRGEAMPSIASVSILTLLTAQE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V KG + L + VGT + DLF+N P R KY++S ++ H V
Sbjct: 117 GAAHGTKLVAKGGEIEEL--EPATSPVGTKITVEDLFFNTPARLKYLKSQQAELSHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D
Sbjct: 174 ILNRLSLAHPEIAFTLIN--DGKEMTKTAGTGNLRQAIAGVYGLASAKKMVAIENRDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E++G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EVTGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P +++++ L D+ P K V ++A I +AI +A
Sbjct: 273 GSKLMVGRFPLAIIHIQIDPYLADVNVHPTKQEVRISKERELMALISQAIANAL 326
>gi|125973294|ref|YP_001037204.1| DNA mismatch repair protein MutL [Clostridium thermocellum ATCC
27405]
gi|125713519|gb|ABN52011.1| DNA mismatch repair protein MutL [Clostridium thermocellum ATCC
27405]
Length = 755
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 180/355 (50%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E N + +G V+ VV+ELV NS+DAG+T + V + ++KVVD+
Sbjct: 1 MGRIIILDENTANQIAAGEVVERPASVVKELVENSIDAGSTNISVEINNGGISFIKVVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI D + + ERHA TSK+ +D++ I + GFRGEALASI+ VS +E+ ++
Sbjct: 61 GSGIEEDDIEIAFERHA-TSKIRRASDLE---AITSLGFRGEALASIASVSTVEVTSRPA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
R G ++G L G GTT + RDLFYN P R K+++ + + V
Sbjct: 117 HREYGRYVKIQGGTVLESG--QVGCPAGTTFIVRDLFYNTPARFKFLKKDSTEAGY-VSD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIAL +P +SF+ I+ +++ ++ T ++ L+ + S +G E E++ D +
Sbjct: 174 IVSRIALGNPDISFRLIN--NKNTVIHTPGNNDLLSTIYSLYGKETAKECMEISYEDETV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+I+GY SP + + + +Q +Y+N RY+ I ++ ++ + + F+
Sbjct: 232 KITGYAGSPEIARANRNYQSIYLNKRYIKNKVISSAIDEAYKTYLMKNKF----AFI--- 284
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
+L + L D+ P K V F + + + A+ +A + K
Sbjct: 285 ----------VLYIELNPLLVDVNVHPTKMEVRFSREQEIFRAVYHAVNNALLSK 329
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 26/218 (11%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I ++ DA+++ QV +I + L +IDQHAA ERIR EEL+ K E + YL
Sbjct: 559 IERNVFLDARIIGQVFSTYILLQNEDDLIIIDQHAAHERIRFEELKEKYARNESLA-QYL 617
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
+ L L+ E G+I SF N I L +VP
Sbjct: 618 LTPVVIELTNQEIVFLEEEKELFNKLGFIF-------ESFGNN---------SIILRSVP 661
Query: 1279 CI---FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1335
GV + +++++FL ++ ++ AC+ A+ L E
Sbjct: 662 IPDEGVGVKEAFLEVVDFLMSKGRKYDKIIEEDALYQI----ACKSAVKANKKLDEIEIK 717
Query: 1336 LIVEELKQTSLCFQCAHGRPTTVPLVN--LEALHKQIA 1371
I+++L + C HGRPT V + E + K+I
Sbjct: 718 AILDKLNMLQNPYTCPHGRPTVVKITKYEFEKMFKRIV 755
>gi|419800657|ref|ZP_14325928.1| DNA mismatch repair protein [Streptococcus parasanguinis F0449]
gi|385694485|gb|EIG25086.1| DNA mismatch repair protein [Streptococcus parasanguinis F0449]
Length = 693
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 217/465 (46%), Gaps = 51/465 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 47 MSQIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIRITDN 106
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ AD+ I T GFRGEA+ SI+ VS+L ++T
Sbjct: 107 GEGIAHDEVALALRRHA-TSKIKSQADL---FRIRTLGFRGEAMPSIASVSILTLLTAQE 162
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V KG + L + VGT + DLF+N P R KY++S ++ H V
Sbjct: 163 GAAHGTKLVAKGGEIEEL--EPATSPVGTKITVEDLFFNTPARLKYLKSQQAELSHIV-D 219
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D
Sbjct: 220 ILNRLSLAHPEIAFTLIN--DGKEMTKTAGTGNLRQAIAGVYGLVSAKKMVAIENRDLDF 277
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E++G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 278 EVTGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 318
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++N++ L D+ P K V +++ I +AI +A ++
Sbjct: 319 GSKLMVGRFPLAIINIQIDPYLADVNVHPTKQEVRISKERELMSLISQAIANALKEQ--- 375
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKD 417
D++ DA L S + + + PL K+ + +E + + D
Sbjct: 376 -----DLIPDALENLAKSTIRRTEKPVQT-TLPL----KENRLYYDRESQDFKLRPEVAD 425
Query: 418 PVE-LAEEN-TEMEFFSQP--KHSSSLLDGSFAECLPIVPPKIDH 458
P LA+E TE P K +S++ FAE +V ++DH
Sbjct: 426 PQRPLADETATEARIQENPVEKPTSAI---KFAERKAVVYDELDH 467
>gi|256003774|ref|ZP_05428762.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM
2360]
gi|385778794|ref|YP_005687959.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM
1313]
gi|419723189|ref|ZP_14250324.1| DNA mismatch repair protein mutL [Clostridium thermocellum AD2]
gi|419724907|ref|ZP_14251962.1| DNA mismatch repair protein mutL [Clostridium thermocellum YS]
gi|255992335|gb|EEU02429.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM
2360]
gi|316940474|gb|ADU74508.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM
1313]
gi|380771527|gb|EIC05392.1| DNA mismatch repair protein mutL [Clostridium thermocellum YS]
gi|380780956|gb|EIC10619.1| DNA mismatch repair protein mutL [Clostridium thermocellum AD2]
Length = 755
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 180/355 (50%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E N + +G V+ VV+ELV NS+DAG+T + V + ++KVVD+
Sbjct: 1 MGRIIILDENTANQIAAGEVVERPASVVKELVENSIDAGSTNISVEINNGGISFIKVVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI D + + ERHA TSK+ +D++ I + GFRGEALASI+ VS +E+ ++
Sbjct: 61 GSGIEEDDIEIAFERHA-TSKIRRASDLE---AITSLGFRGEALASIASVSTVEVTSRPA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
R G ++G L G GTT + RDLFYN P R K+++ + + V
Sbjct: 117 HREYGRYVKIQGGTVLESG--QVGCPAGTTFIVRDLFYNTPARFKFLKKDSTEAGY-VSD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIAL +P +SF+ I+ +++ ++ T ++ L+ + S +G E E++ D +
Sbjct: 174 IVSRIALGNPDISFRLIN--NKNTVIHTPGNNDLLSTIYSLYGKETAKECMEISYEDETV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+I+GY SP + + + +Q +Y+N RY+ I ++ ++ + + F+
Sbjct: 232 KITGYAGSPEIARANRNYQSIYLNKRYIKNKVISSAIDEAYKTYLMKNKF----AFI--- 284
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
+L + L D+ P K V F + + + A+ +A + K
Sbjct: 285 ----------VLYIELNPLLVDVNVHPTKMEVRFSREQEIFRAVYHAVNNALLSK 329
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 26/218 (11%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I ++ DA+++ QV +I + L +IDQHAA ERIR EEL+ K E + YL
Sbjct: 559 IERNVFLDARIIGQVFSTYILLQNEDDLIIIDQHAAHERIRFEELKEKYARNESLA-QYL 617
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
+ L L+ E G+I SF N I L +VP
Sbjct: 618 LTPVVIELTNQEIVFLEEEKELFNKLGFIF-------ESFGNN---------SIILRSVP 661
Query: 1279 CI---FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1335
GV + +++++FL ++ ++ AC+ A+ L E
Sbjct: 662 IPDEGVGVKEAFLEVVDFLMSKGRKYDKIIEEDALYQI----ACKSAVKANKKLDEIEIK 717
Query: 1336 LIVEELKQTSLCFQCAHGRPTTVPLVN--LEALHKQIA 1371
I+++L + C HGRPT V + E + K+I
Sbjct: 718 AILDKLNMLQNPYTCPHGRPTVVKITKYEFEKMFKRIV 755
>gi|410584484|ref|ZP_11321587.1| DNA mismatch repair protein MutL [Thermaerobacter subterraneus DSM
13965]
gi|410504419|gb|EKP93930.1| DNA mismatch repair protein MutL [Thermaerobacter subterraneus DSM
13965]
Length = 712
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 168/355 (47%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I RL V N + +G V+ VV+ELV NS+DAGA ++ V V + V DD
Sbjct: 1 MGRIRRLDPQVINQIAAGEVVERPASVVKELVENSLDAGARRIRVDVAEGGLRSITVSDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ D +L ERHA TSK+ L D+ A GT GFRGEALA+++ V+ LE++T+
Sbjct: 61 GCGMDPDDALLAVERHA-TSKISRLDDLARA---GTLGFRGEALAAMASVARLELVTRPP 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G+R V++G G GT V RDLF+N P RRK+++ P +
Sbjct: 117 AAEGGFRVVVEGGAQRSAG--PWASPPGTRVTVRDLFFNTPARRKHLK-GPVAEFGRIAD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V AL P V F+ + E+L T S P ++ FG + + L V A A
Sbjct: 174 VVTAHALARPDVRFEL--WHNGREVLRTSGSGDPAVAVLECFGPDVATGLIPVAAAGDAC 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY+ +P + + +A+Q+ IN R V + F ++++ L +
Sbjct: 232 RIEGYVGAPRIARASRAWQFFSINRRPV---------QVPSLRFSLENAYRH---LLPAR 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
R P +L L P D+ P K V V + + RA+ SA ++
Sbjct: 280 R-----YPVAVLALTVPGEEVDVNVHPAKLEVRLVRERAVASLLYRAVESALAER 329
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 72/196 (36%), Gaps = 25/196 (12%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI 1229
L QV ++ L V+DQHAA ERI E + G L L LP
Sbjct: 518 LGQVAGTYLACAGPDGLYVVDQHAAHERIYFERFLAQGAGQAGVPAQLLAVPVVLDLPAS 577
Query: 1230 GYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFG--VNLSD 1287
Y LL A + G+ I G RS + + AVP S
Sbjct: 578 EYALLLEQAAAVARMGF--QIEPFGPRS--------------VAVRAVPAALADRPAPSL 621
Query: 1288 VDLLEFLQQLADTDGSSTTPPSV-----LRVLNSKACRGAIMFGDSLLPSECALIVEELK 1342
+ L G P + R+L AC+ AI GD L P E A ++ +L
Sbjct: 622 LADLLARLLAEAVRGGGEEAPVLDTDRAARIL--AACKAAIKAGDRLHPQEMAQLLADLA 679
Query: 1343 QTSLCFQCAHGRPTTV 1358
+ + C HGRPT +
Sbjct: 680 RCRQPYACPHGRPTVI 695
>gi|281417498|ref|ZP_06248518.1| DNA mismatch repair protein MutL [Clostridium thermocellum JW20]
gi|281408900|gb|EFB39158.1| DNA mismatch repair protein MutL [Clostridium thermocellum JW20]
Length = 761
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 180/355 (50%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E N + +G V+ VV+ELV NS+DAG+T + V + ++KVVD+
Sbjct: 1 MGRIIILDENTANQIAAGEVVERPASVVKELVENSIDAGSTNISVEINNGGISFIKVVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI D + + ERHA TSK+ +D++ I + GFRGEALASI+ VS +E+ ++
Sbjct: 61 GSGIEEDDIEIAFERHA-TSKIRRASDLE---AITSLGFRGEALASIASVSTVEVTSRPA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
R G ++G L G GTT + RDLFYN P R K+++ + + V
Sbjct: 117 HREYGRYVKIQGGTVLESG--QVGCPAGTTFIVRDLFYNTPARFKFLKKDSTEAGY-VSD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIAL +P +SF+ I+ +++ ++ T ++ L+ + S +G E E++ D +
Sbjct: 174 IVSRIALGNPDISFRLIN--NKNTVIHTPGNNDLLSTIYSLYGKETAKECMEISYEDETV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+I+GY SP + + + +Q +Y+N RY+ I ++ ++ + + F+
Sbjct: 232 KITGYAGSPEIARANRNYQSIYLNKRYIKNKVISSAIDEAYKTYLMKNKF----AFI--- 284
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
+L + L D+ P K V F + + + A+ +A + K
Sbjct: 285 ----------VLYIELNPLLVDVNVHPTKMEVRFSREQEIFRAVYHAVNNALLSK 329
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
I ++ DA+++ QV +I + L +IDQHAA ERIR EEL+ K E + YL
Sbjct: 565 IERNVFLDARIIGQVFSTYILLQNEDDLIIIDQHAAHERIRFEELKEKYARNESLA-QYL 623
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
+ L L+ E G+I SF N I L +VP
Sbjct: 624 LTPVVIELTNQEIVFLEEEKELFNKLGFIF-------ESFGNN---------SIILRSVP 667
Query: 1279 CI---FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1335
GV + +++++FL ++ ++ AC+ A+ L E
Sbjct: 668 IPDEGVGVKEAFLEVVDFLMSKGRKYDKIIEEDALYQI----ACKSAVKANKKLDEIEIK 723
Query: 1336 LIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
I+++L + C HGRPT V + E
Sbjct: 724 AILDKLNMLQNPYTCPHGRPTVVKITKYE 752
>gi|417918093|ref|ZP_12561646.1| DNA mismatch repair protein [Streptococcus parasanguinis SK236]
gi|342829084|gb|EGU63445.1| DNA mismatch repair protein [Streptococcus parasanguinis SK236]
Length = 692
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 174/354 (49%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 46 MSQIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIRITDN 105
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEA+ SI+ VS+L ++T
Sbjct: 106 GEGIAHDEVALALRRHA-TSKIKNQADL---FRIRTLGFRGEAMPSIASVSILTLLTAQE 161
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V KG + L + VGT V DLF+N P R KY++S ++ H V
Sbjct: 162 GAAHGTKLVAKGGEIEEL--EPATSPVGTKVTVEDLFFNTPARLKYLKSQQAELSHIV-D 218
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D
Sbjct: 219 ILNRLSLAHPEIAFTLIN--DGKEMTKTAGTGNLRQAIAGVYGLASAKKMVAIENRDLDF 276
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E++G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 277 EVTGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 317
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P +++++ L D+ P K V ++A I +AI +A
Sbjct: 318 GSKLMVGRFPLAIIHIQIDPYLADVNVHPTKQEVRISKERELMALISQAIANAL 371
>gi|421490197|ref|ZP_15937571.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus anginosus SK1138]
gi|400373602|gb|EJP26530.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus anginosus SK1138]
Length = 648
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 177/357 (49%), Gaps = 32/357 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 1 MSKIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLKSIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEAL SI+ VS L I T +
Sbjct: 61 GEGIEHEEVSLALRRH-ATSKIKKQADL---FRIRTLGFRGEALPSIASVSRLTIETATN 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + +G + I+ GT + DLF+N P R KYM+S ++ H V
Sbjct: 117 GGTHGTLLIAQGGEI--ETIEPSSCPRGTKIKVEDLFFNTPARLKYMKSQQAELSHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+V+ FI + EL T + + + +G+ + E++A+D
Sbjct: 174 VMNRLSLAHPEVA--FILLNDGKELTRTAGTGNLRQAIAGIYGLTTAKKMIEISASDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
SK P ++++R L D+ P K V ++A I +AI SA +K+
Sbjct: 273 GSKLMVGRFPIAVIDIRIDPYLADVNVHPTKQEVRISKERELMALISQAI-SASLKE 328
>gi|374854606|dbj|BAL57483.1| DNA mismatch repair protein MutL [uncultured Chloroflexi bacterium]
Length = 579
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 27/350 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LP V + + +G V+ VV+EL+ N++DAGA +V V + ++VVDDG G
Sbjct: 3 IRVLPPEVASQIAAGEVIERPVSVVKELIENALDAGAHQVQVRLLQAGRRLIEVVDDGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + L L +RHA TSK+ + +D I T GFRGEALASI+ VS L I ++
Sbjct: 63 IPPEELSLAVQRHA-TSKI---SCAEDLYSIHTLGFRGEALASIAAVSHLTITSRTAESE 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+G R ++G + L G++ GT V LFYN P R K++++ + ++ +
Sbjct: 119 HGMRIRLEGGRVL--GMESVGAPPGTLVRVEHLFYNLPARLKFLKTDLTE-RRAIDVLLS 175
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R AL +P+V F E E+ LL T A+L + +G+E L EV +G L +S
Sbjct: 176 RYALAYPQVRFTL--KEGENLLLQTAGDGDRRAILAALYGVEVARPLIEVQEEEGGLRLS 233
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+IS P + S + ++N R+V P+ L +A + L R
Sbjct: 234 GFISPPGITRSNRREIAFFVNGRWVQDVPLATAL------------LQAYHTLLMVGR-- 279
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
P L L P D+ P K V F++ + + +F++RA+R A +
Sbjct: 280 ---YPLAFLFLEVPPQDVDVNVHPAKAEVRFREADRIFSFVQRAVRRALL 326
Score = 41.6 bits (96), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 33/218 (15%)
Query: 1162 SCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLE----ELRHKVLSGEGKSVAY 1217
S L +++ Q+ ++ L +IDQHAA ERI E ELR K L+ +
Sbjct: 384 SGLPLLRLIGQLANTYLLAEGPDGLYLIDQHAAHERILFEKFLNELREKRLNSQA----- 438
Query: 1218 LDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAV 1277
L + + P LL++ ++ +G+ + G +F + A+
Sbjct: 439 LLSPVVVTFPPHQATLLESQLPSLEHFGF--EVIAFGPHTFQ--------------IRAI 482
Query: 1278 PCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKAC-RGAIMFGDSLLPSEC 1334
P +F + D L+ L + TP + L ++ C R AI G L P+E
Sbjct: 483 PALF----ATADPTAALRALVEDFEEDETPLQQEQEARLAARICKRLAIKAGQDLSPAEQ 538
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQ 1372
+VEEL++ C HGRPT + L +++ L +Q +
Sbjct: 539 RALVEELERCQSPRTCPHGRPTMIHL-SVDLLERQFGR 575
>gi|337282895|ref|YP_004622366.1| DNA mismatch repair protein HexB [Streptococcus parasanguinis ATCC
15912]
gi|335370488|gb|AEH56438.1| DNA mismatch repair protein HexB [Streptococcus parasanguinis ATCC
15912]
Length = 693
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 219/463 (47%), Gaps = 47/463 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 47 MSQIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIRITDN 106
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ AD+ I T GFRGEA+ SI+ VS+L ++T
Sbjct: 107 GEGIAHDEVALALRRHA-TSKIKSQADL---FRIRTLGFRGEAMPSIASVSILTLLTAQE 162
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V KG + ++ VGT + DLF+N P R KY++S ++ H V
Sbjct: 163 GAVHGTKLVAKGGEI--EEVEPATSPVGTKITVEDLFFNTPARLKYLKSQQAELSHIV-D 219
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D
Sbjct: 220 ILNRLSLAHPEIAFTLIN--DGKEMTKTAGTGNLRQAIAGVYGLASAKKIVAIENRDLDF 277
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E++G++S P + + + + ++IN RY+ + LLN DS+ G
Sbjct: 278 EVTGFVSLPELTRANRNYISLFINGRYIK----NFLLNRA-----ILDSY--------GS 320
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
+ P ++N++ L D+ P K V ++A I +AI +A ++
Sbjct: 321 KLMVGRFPLAIINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIANALKEQ----- 375
Query: 360 FDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDPV 419
D++ DA L S + + + PL K+ + +E + + DP
Sbjct: 376 ---DLIPDALENLAKSTIRRTEKPVQT-TLPL----KENRLYYDRESQDFKLRPEVADPQ 427
Query: 420 E-LAEEN-TEMEFFSQP--KHSSSLLDGSFAECLPIVPPKIDH 458
LA+E TE P K +S++ FAE +V ++DH
Sbjct: 428 RPLADETATEARIQENPVEKPTSAI---KFAERKAVVYDELDH 467
>gi|322388580|ref|ZP_08062180.1| exopolyphosphatase [Streptococcus infantis ATCC 700779]
gi|419843708|ref|ZP_14367016.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus infantis ATCC 700779]
gi|321140500|gb|EFX36005.1| exopolyphosphatase [Streptococcus infantis ATCC 700779]
gi|385702605|gb|EIG39747.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus infantis ATCC 700779]
Length = 649
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 197/436 (45%), Gaps = 43/436 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVKLALRRHA-TSKIKSQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGQV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMVEIENADLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P +++++ L D+ P K V ++A + AI K +
Sbjct: 273 GSKLMVGRFPLAVIHIQIDPYLADVNVHPTKQEVRISKERELMALVSEAI----AKSLKE 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKD 417
+ D LE+ +R + Q++ L + L + E R T E
Sbjct: 329 QTLIPDALENLAKSTVRNREKVEQTTLPLRENTL--------YYEKNEPNRPTQAEVADH 380
Query: 418 PVELAEENTEMEFFSQ 433
V L EE ++ F++
Sbjct: 381 QVNLTEERQDLNLFAK 396
>gi|417938905|ref|ZP_12582198.1| DNA mismatch repair protein [Streptococcus infantis SK970]
gi|343390350|gb|EGV02930.1| DNA mismatch repair protein [Streptococcus infantis SK970]
Length = 649
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 207/463 (44%), Gaps = 45/463 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMVEIENADLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++A + AI K +
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAI----AKSLKE 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKD 417
+ D LE+ +R + Q++ L + L + E R T E
Sbjct: 329 QTLIPDALENLAKSTVRNREKVEQTTLPLRENTL--------YYERNEPIRPTQAEVADH 380
Query: 418 PVELAEENTEMEFFSQPK--HSSSLLDGSFAECLPIVPPKIDH 458
V+L EE ++ F++ + FAE P ++DH
Sbjct: 381 QVDLTEEKQDLNLFAKEALDQMTKPAKLHFAERKPASYDQLDH 423
>gi|421276200|ref|ZP_15727023.1| DNA mismatch repair protein mutL [Streptococcus mitis SPAR10]
gi|395878153|gb|EJG89220.1| DNA mismatch repair protein mutL [Streptococcus mitis SPAR10]
Length = 649
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 212/465 (45%), Gaps = 49/465 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+EL+ N++DAG++++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELIENAIDAGSSQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++A + AI K +
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAI----AKSLKE 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK +++++++ E R T E
Sbjct: 329 QTLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NNLYYEQTELTRPTQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQPK--HSSSLLDGSFAECLPIVPPKIDH 458
V L EE + F++ + FAE P ++DH
Sbjct: 379 DHQVNLTEERQALNLFAKETLDQMTKPAKLHFAERKPASYDQLDH 423
>gi|401682833|ref|ZP_10814723.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. AS14]
gi|400184073|gb|EJO18320.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. AS14]
Length = 648
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 217/470 (46%), Gaps = 60/470 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 117 AGQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 172 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 270 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ 329
Query: 355 IAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ER 408
D++ DA L S + Q+S L + L +Q D + ++
Sbjct: 330 --------DLIPDALENLAKSTVKRAAKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQ 381
Query: 409 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
++F+E + E +E E P S+S+ FAE P+ ++DH
Sbjct: 382 LSFEESAEPIHEATDEKAE------PPQSTSV---KFAERKPVSYDQLDH 422
>gi|125719036|ref|YP_001036169.1| DNA mismatch repair protein [Streptococcus sanguinis SK36]
gi|166232112|sp|A3CR14.1|MUTL_STRSV RecName: Full=DNA mismatch repair protein MutL
gi|125498953|gb|ABN45619.1| DNA mismatch repair protein, putative [Streptococcus sanguinis
SK36]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 216/470 (45%), Gaps = 61/470 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDE---RKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 117 AGRHGTLLVAQGGE-----IEEHVPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 172 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 270 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ 329
Query: 355 IAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ER 408
D++ DA L S + Q+S L + L KQ D + ++
Sbjct: 330 --------DLIPDALENLAKSTVKRASKPEQTSLPLKENRLYYDKKQNDFFLKPQVAEQQ 381
Query: 409 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
++F+E K E +E E P+ +S FAE P+ ++DH
Sbjct: 382 LSFEESAKPVHEATDEKAE------PQSTSV----KFAERKPVSYDQLDH 421
>gi|291530259|emb|CBK95844.1| DNA mismatch repair protein MutL [Eubacterium siraeum 70/3]
Length = 677
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 187/359 (52%), Gaps = 39/359 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L ++V + +G V+ + V++ELV NS+DAGA + V + G+ Y+++
Sbjct: 1 MPEIRLLDKSVAELIAAGEVIERPSSVIKELVENSIDAGARHITVEIKHGGIS--YMRIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
DDG GI+ D + RHA TSK+ DD TGI T GFRGEALAS++ V+ +E++++
Sbjct: 59 DDGCGIAYDQMPTAFLRHA-TSKI---RTGDDLTGIMTMGFRGEALASVAAVAKIEMMSR 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKD----VGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
G G R +++G G + E + GTT+V ++LFYN P R K+++ +
Sbjct: 115 QDGDELGGRYIIEG------GEEKEHESCGCPTGTTIVIKELFYNTPARLKFLKKDISEG 168
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 233
+ + V R+AL HP +SF+FI + T S L+ + FG + L V+
Sbjct: 169 -NFIAATVDRLALSHPDISFRFI--RDNKSVRMTSGDGSLLSAAKAVFGRQFADSLIPVD 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+ +++SGY+SSP + ++ Q ++N+RY+ K +AA ++++ N
Sbjct: 226 FSLNGIDVSGYVSSPLFCRNSRSMQTFFVNTRYI------KSTTCMAA---LEEAYR--N 274
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
+ GK PA +LN+ D+ P KT + F +PV + A+++A +
Sbjct: 275 SMMVGK------FPACILNISLSPETVDVNVHPAKTEIRFAYEKPVFDAVYFAVKNALV 327
Score = 45.1 bits (105), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 26/196 (13%)
Query: 1167 AKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVL 1226
+V+ + K +I AG L +ID+HAA ERIR E+L+ + ++ + L + EL L
Sbjct: 494 VRVIGEFLKTYILCEAGEELIIIDKHAAHERIRFEKLKEEFVT----TSQLLIDKTELKL 549
Query: 1227 PEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLS 1286
Y+ L + E ++ G + L+ + + + A+P + +
Sbjct: 550 SPEEYEALHEYYEYVEQSG----------------IELVFCDDSTVQITAMPSVVKCSPQ 593
Query: 1287 DVDLLEFLQQLADTDGSSTTPPSVL--RVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1344
++ + + Q+L +T +T L +L++ AC+ AI D E + + +
Sbjct: 594 EI-VSDVAQRLMNT---ATDQKGALFDDMLHTMACKSAIKAHDDTDILELQALADRVMND 649
Query: 1345 SLCFQCAHGRPTTVPL 1360
C HGRP L
Sbjct: 650 RTIRFCPHGRPVMTSL 665
>gi|351712504|gb|EHB15423.1| DNA mismatch repair protein Mlh3 [Heterocephalus glaber]
Length = 1458
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 179/356 (50%), Gaps = 23/356 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V + V + V+V+D+G G+
Sbjct: 2 IKCLSVEVKAKLRSGLAINSLGQCVEELALNSIDAEAKCVAIRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRP 122
D + +G R+ T K + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDIDKVGHRY-FTGKCHSVQDLENPR---FYGFRGEALASIADLASAVEISSKKNRTM 117
Query: 123 NGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ + + L D R GTTV +LFY PVRRK + P+ +++ V
Sbjct: 118 KTFVKLFQNGRALKACEADLTRPSAGTTVTVYNLFYQLPVRRKCL--DPRLEFEKIRQRV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 176 EALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLKEIHFRYKEFEL 235
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK 299
SGYISS ++ K Q++++N R + + +HKL++ L S C K NG +
Sbjct: 236 SGYISS--EAHYNKNMQFLFVNRRLILRTKLHKLIDFLLRKESIIC----KPKNGSASRQ 289
Query: 300 -------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
RS + Y++N+ C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 290 MNSSPRHRSTPELHGIYVINVHCQFCEYDVCMEPAKTLIEFQNWDTLLICIQEGVK 345
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 126/301 (41%), Gaps = 75/301 (24%)
Query: 1140 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLA-------- 1187
+D+SSG L P K + +VLQQVD KFI +
Sbjct: 1162 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTGENGEGGGN 1221
Query: 1188 ---VIDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1230
++DQHAA ERIRLE+L R K+LS + LD + + E
Sbjct: 1222 LLILVDQHAAHERIRLEQLITDSCEKQQPQGCGRKKLLSS--TIIPPLD----ITVTEEQ 1275
Query: 1231 YQLLQNFAEQIKDWGW------------------ICNIHTQGSRSFNKNLNLLQRQITVI 1272
+LL + + ++D G +C + + N L+R + +
Sbjct: 1276 RRLLWCYHKNLEDLGLEFTFPDTSDSLVLVGKVPLCFVEREA--------NELRRGRSTV 1327
Query: 1273 TLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPS 1332
T V + +E LQ G T P +V +VL S+AC GAI F D L P
Sbjct: 1328 TKSIVEEFIR------EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDHLSPE 1379
Query: 1333 ECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRG 1386
E ++E L L FQCAHGRP+ +PL +L+ L ++ +A+L ++ WH +
Sbjct: 1380 ESYRLIEALSWCQLPFQCAHGRPSMLPLADLDHLEQEKQTKPNLAKLRKMAQAWHLFGKA 1439
Query: 1387 E 1387
E
Sbjct: 1440 E 1440
>gi|315612294|ref|ZP_07887208.1| DNA mismatch repair protein HexB [Streptococcus sanguinis ATCC
49296]
gi|315315687|gb|EFU63725.1| DNA mismatch repair protein HexB [Streptococcus sanguinis ATCC
49296]
Length = 649
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 217/465 (46%), Gaps = 49/465 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGQV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EI+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTEVTRASQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQP--KHSSSLLDGSFAECLPIVPPKIDH 458
VEL EE ++ F++ + + FAE P+ ++DH
Sbjct: 379 DHQVELTEEGQDLTLFAKETLEQLTKPAKLHFAERKPVSYDQLDH 423
>gi|322386540|ref|ZP_08060167.1| DNA mismatch repair protein HexB [Streptococcus cristatus ATCC
51100]
gi|417921359|ref|ZP_12564850.1| DNA mismatch repair protein [Streptococcus cristatus ATCC 51100]
gi|321269459|gb|EFX52392.1| DNA mismatch repair protein HexB [Streptococcus cristatus ATCC
51100]
gi|342834042|gb|EGU68317.1| DNA mismatch repair protein [Streptococcus cristatus ATCC 51100]
Length = 648
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 216/467 (46%), Gaps = 55/467 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G V +G + + VGT + DLF+N P R KYM+S ++ H V
Sbjct: 117 AGQHGTLLVAQGGEI--EKHEPTSSSVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 174 VINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E+SGY+S P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERITF 411
D++ DA L S + Q+S L + L +Q D + ++++F
Sbjct: 330 -----DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQLSF 384
Query: 412 QEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
+E K PV A + ++P+ +S FAE P+ ++DH
Sbjct: 385 EELAK-PVHQATDEK-----AEPQPTSV----KFAERKPVSYDQLDH 421
>gi|419778292|ref|ZP_14304185.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK10]
gi|383187307|gb|EIC79760.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK10]
Length = 649
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 217/465 (46%), Gaps = 49/465 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQITIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EKVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTEVTRASQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQP--KHSSSLLDGSFAECLPIVPPKIDH 458
VEL EE ++ F++ + + FAE P+ ++DH
Sbjct: 379 DYQVELTEEGQDLTLFAKETLEQLTKPAKLHFAERKPVSYDQLDH 423
>gi|217967465|ref|YP_002352971.1| DNA mismatch repair protein MutL [Dictyoglomus turgidum DSM 6724]
gi|226723033|sp|B8E280.1|MUTL_DICTD RecName: Full=DNA mismatch repair protein MutL
gi|217336564|gb|ACK42357.1| DNA mismatch repair protein MutL [Dictyoglomus turgidum DSM 6724]
Length = 572
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 182/352 (51%), Gaps = 30/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDD 59
MG + LPE +RN + +G V+ VV+ELV NS+DAGA ++ V ++ + V+DD
Sbjct: 1 MGKVILLPEEIRNKIAAGEVIERPVSVVKELVENSIDAGAKRITVEFINGGETLISVIDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++++ +L R ATSK + +D I T GFRGEALASI+ VS +E+ +K
Sbjct: 61 GEGMTKEDAILALNRF-ATSK---IKTEEDLYNIKTLGFRGEALASIASVSKVEVRSKTE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ KV G + I+ + GT + DLFYN P RRK+++S + + +
Sbjct: 117 TEDGVFIKVEGG---VIQEINLWQGSKGTVIKVFDLFYNVPARRKFLKSKTTET-NLIVD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLIS-SFGIEDFSFLDEVNANDGA 238
V RIA+ +P++SF+ I + +++ + S + L ++S F IE + L + +G
Sbjct: 173 FVKRIAMAYPEISFQLIQ-DGKNKFI--TSGNGKLEDVVSLLFDIEIHNNLIFLQRKEGN 229
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
I G+IS P IS+K+ Y Y+N R+V I L A + +K N L+G
Sbjct: 230 YIIEGFISKPGKLISLKSQDYFYVNRRWVRNNII------LQA---IKEGYK--NRLLEG 278
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P ++ L P+ D+ P K + F+ + V F+ +AI+ A
Sbjct: 279 ------YFPFSIVFLTLPYHEVDVNVHPTKREIKFEKEKEVYEFVSKAIKEA 324
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 40/199 (20%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL------DAE 1221
+++ Q+ +I V + +IDQHAA ERIR EEL+ ++ G ++V L +E
Sbjct: 386 RIVGQIFDNYIIVETKDRVYIIDQHAAHERIRYEELKKELSLGYLQNVEILFPLVIEVSE 445
Query: 1222 QELVLPEIGYQLLQNFAEQIKDWG----WICNIHTQGSRSFNKNL-NLLQRQITVITLLA 1276
+E L LL+ FA +D+G I + + + +K++ NL Q I+
Sbjct: 446 EEKELLNKHKDLLEKFAFSWEDFGPYHIRIIRVPYEFLKFDSKSIENLFQEIIS------ 499
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1336
++S+ DL +L D +++ S AC AI G+ L+ E +
Sbjct: 500 -------DISEKDL----SKLED------------KIIKSMACHSAIRSGNILVREEMEV 536
Query: 1337 IVEELKQTSLCFQCAHGRP 1355
++ + + + C HGRP
Sbjct: 537 LINLIFERKIPLTCPHGRP 555
>gi|71908777|ref|YP_286364.1| DNA mismatch repair protein MutL [Dechloromonas aromatica RCB]
gi|71848398|gb|AAZ47894.1| DNA mismatch repair protein MutL [Dechloromonas aromatica RCB]
Length = 615
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 172/351 (49%), Gaps = 34/351 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M TI RLP+ + + + +G V+ V++EL+ NS+DAG+ + V++ +++ DD
Sbjct: 9 MPTIARLPDLLISQIAAGEVVERPASVLKELLENSLDAGSKAIQVHLEEGGVKLIRITDD 68
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+RD L L RHA TSK+ L DD +GT GFRGEALAS++ V+ L I ++
Sbjct: 69 GCGIARDELALALTRHA-TSKISSL---DDLERVGTLGFRGEALASVASVARLSITSRER 124
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV--GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G + ++ ++G G + E + GT V RDL++N P RRK+++S + H
Sbjct: 125 GAAHAWK--LRGEP----GAEPEPAALMAGTVVEMRDLYFNTPARRKFLKSESTEFAHCA 178
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
V R+AL P V+ I + L + + + G E V+A G
Sbjct: 179 -DAVKRLALTRPDVA---ISLTHNGRNLFQLAPADAPRRIADILGDEFLGAARAVDAGTG 234
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
AL I G+ P + K QYV++N R+V K+++H +A L
Sbjct: 235 ALSIGGFAIDPTRATDAKDGQYVFVNGRFVRD----KIISHAL--------REAYRDVLH 282
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G R PA L + +L D+ P KT V F+D + F+ AI+
Sbjct: 283 GSRQ-----PAVCLFVNIDPALVDVNVHPAKTEVRFRDSRAMHQFVFHAIQ 328
>gi|385259659|ref|ZP_10037827.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. SK140]
gi|385193574|gb|EIF40935.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. SK140]
Length = 649
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 207/455 (45%), Gaps = 46/455 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ V + +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENAIDAGSSQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMVEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-RSAWMKKIA 356
SK P ++++ L D+ P K V ++A + AI +S + +
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAIAKSLKEQTLI 332
Query: 357 HDSFD---------VDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE 407
D+ + + +E LPL+ + Q T L P +A DH + E
Sbjct: 333 PDALENLAKSTVRNREKVEQTILPLKENNLYYEQ--TELTRPPQAEVA---DHQVNLTEE 387
Query: 408 RITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLD 442
R F K+ ++ + ++ F + S LD
Sbjct: 388 RQDLNLFAKETLDQLTKPAKLHFAERKSISYDQLD 422
>gi|307710211|ref|ZP_07646654.1| DNA mismatch repair protein mutL [Streptococcus mitis SK564]
gi|307618973|gb|EFN98106.1| DNA mismatch repair protein mutL [Streptococcus mitis SK564]
Length = 641
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 205/436 (47%), Gaps = 51/436 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+ ++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSNQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAMD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKD 417
+ D LE+ L + R + T L PLK + +++++ E +Q
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKAEVADYQ----- 373
Query: 418 PVELAEENTEMEFFSQ 433
VEL EE ++ F++
Sbjct: 374 -VELTEEGQDLTLFAK 388
>gi|422879899|ref|ZP_16926364.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1059]
gi|422929745|ref|ZP_16962686.1| DNA mismatch repair protein HexB [Streptococcus sanguinis ATCC
29667]
gi|422932711|ref|ZP_16965642.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK340]
gi|332365310|gb|EGJ43073.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1059]
gi|339614338|gb|EGQ19040.1| DNA mismatch repair protein HexB [Streptococcus sanguinis ATCC
29667]
gi|339618462|gb|EGQ23060.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK340]
Length = 689
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 217/471 (46%), Gaps = 62/471 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 42 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 101
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 102 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 157
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 158 AGQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 212
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + +G+ + E++A+D
Sbjct: 213 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGDLRQAIAGIYGLATAKKMVEISASD 269
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 270 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 310
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 311 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ 370
Query: 355 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKN----LAKQRDHMF---HKECE 407
D++ DA L S + + S PLK K++D F H +
Sbjct: 371 --------DLIPDALENLAKSTVK-RATKPEQTSLPLKENRLYYDKEQDDFFLKPHVSEQ 421
Query: 408 RITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
+++F+E + E A+E +E P +S+ FAE P ++DH
Sbjct: 422 QLSFEESAETVHEAADEKSE------PPQPTSV---KFAERKPASYDQLDH 463
>gi|220929118|ref|YP_002506027.1| DNA mismatch repair protein MutL [Clostridium cellulolyticum H10]
gi|219999446|gb|ACL76047.1| DNA mismatch repair protein MutL [Clostridium cellulolyticum H10]
Length = 665
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 180/357 (50%), Gaps = 37/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
MG I L E N + +G V+ VV+ELV NS+DAGAT + V + G+ Y+K+
Sbjct: 1 MGRIIVLDENTSNKIAAGEVVEKPASVVKELVENSIDAGATSISVDIKNGGI--SYIKIA 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G G+ D + + ERH ATSK+ D+D + T GFRGEALASI+ V+ +E++TK
Sbjct: 59 DNGIGMDEDDVEIAFERH-ATSKIKRAEDLD---SVITMGFRGEALASIASVASVELMTK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G ++G + D R+ VGTT + +DLF+N P R K+++ +
Sbjct: 115 TAASAYGMYVHVRGGV-----LQDVRQTGCPVGTTFIIKDLFFNTPARYKFLKKDSTEAG 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
+ + + RIAL +P +SFK + ++ L+ T ++ +++ S +G E L +
Sbjct: 170 Y-ISDTISRIALGNPNISFKLTNGKT--PLIHTPGNNDLKSVIYSIYGKEIIKNLVHIEY 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
D ++ISGYI P + S + +Q +YIN RYV KL+++ +A +
Sbjct: 227 ADDKVKISGYIGKPEAARSNRNYQSLYINKRYVK----SKLVSY--------SVEQAFSS 274
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
L R P ++LN+ L D P K V F D + I A+ +A
Sbjct: 275 ILMKNR-----FPFFVLNIDINPILVDANVHPAKIEVRFADESYLSRTIYMAVSNAL 326
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 130/317 (41%), Gaps = 50/317 (15%)
Query: 1084 EETHKAENFKL---SLCPHAHLGA---------QAEGTSIISGTK---WRNGHPQTTNNN 1128
EE KA+ +L +L P A + Q TS + T+ + G P+ N
Sbjct: 370 EENKKADEIRLFTKALEPLAKVDVHKVSTAAEKQPADTSSFTFTRSEDYNVGQPKNLITN 429
Query: 1129 ISCDIHNQDNILDISSGLLHLTGEFFIPDSINK-----------SCLEDAKVLQQVDKKF 1177
+ + N D + + S G+ ++INK + L D K + Q +
Sbjct: 430 VKQE--NSDELKNNSPGIREDDSSQNFDETINKQDQEVNKERVYTELADMKYIGQAFSTY 487
Query: 1178 IPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNF 1237
I + L ++DQHAA ERI E+LR K S E + +L+L + QL
Sbjct: 488 ILLQNNDELVMVDQHAAHERIIYEKLRAKFDSQENTT--------QLLLEPVVIQLQPFE 539
Query: 1238 AEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL-LEFLQQ 1296
+ IK + F N I + +P + G + S D+ +E Q+
Sbjct: 540 IDTIKAKEKLLTGIGFVYEDFGNN---------TIIIRGIPYMVG-DYSPRDIFIELTQK 589
Query: 1297 LADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
L ++ +TP + ++++ AC+ AI L E ++ EL T + C HGRPT
Sbjct: 590 LQESIKPVSTPLAD-EIIHTIACKAAIKANKKLDEKEVHQLLTELSNTGRRYTCPHGRPT 648
Query: 1357 TVPLVN--LEALHKQIA 1371
+ L +E + K+I
Sbjct: 649 VIRLTKNEIEKMFKRIV 665
>gi|227513116|ref|ZP_03943165.1| DNA mismatch repair protein [Lactobacillus buchneri ATCC 11577]
gi|227083691|gb|EEI19003.1| DNA mismatch repair protein [Lactobacillus buchneri ATCC 11577]
Length = 651
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 168/355 (47%), Gaps = 29/355 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
+ I+ LP + N + +G V+ VV+ELV N++DA +T++ + V +KVVDD
Sbjct: 4 LKQIHELPAILANQISAGEVVERPASVVKELVENAIDAHSTEIDITVEDSGLKLIKVVDD 63
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + RHA TSK+ + D + T GFRGEAL SIS VS +E+ T
Sbjct: 64 GDGIDSSQVQTAFLRHA-TSKI---TEQRDLFRVRTLGFRGEALPSISSVSNIELKTSTG 119
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G V KG K + + RK GTTV+ LFYN P R KY+ SSP L +
Sbjct: 120 SV--GTEVVFKGGKFISQQASESRK--GTTVIVSSLFYNTPARLKYL-SSPNTELSKISD 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP+VSF FI + ELL T L +L + +G++ S + + + +
Sbjct: 175 IVNRLALSHPEVSFSFIS--NGRELLRTSGRGDLLQVLGAIYGVKTVSKMQPIKSKTPDI 232
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY+S P + S + + + +N RYV P+ K NG+ G
Sbjct: 233 SIDGYVSLPELTRSSRNYISLILNGRYVRNFPLTK---------------SVINGY--GS 275
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
+ P ++N+ +L D+ P K V + + + AIR K
Sbjct: 276 KLMIGRFPIAVVNISADPALIDVNVHPTKQEVRISEEPKIGGMLSNAIREMLADK 330
>gi|317131678|ref|YP_004090992.1| DNA mismatch repair protein MutL [Ethanoligenens harbinense YUAN-3]
gi|315469657|gb|ADU26261.1| DNA mismatch repair protein MutL [Ethanoligenens harbinense YUAN-3]
Length = 669
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 186/370 (50%), Gaps = 27/370 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+AV + +G V+ VV+EL+ N++DAGA + + + +++V DD
Sbjct: 1 MNRIQVLPKAVAEKIAAGEVVERPASVVKELLENAIDAGAAALTLEIQNGGVRFIRVTDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI + + RHA TSK+ D++ IGT GFRGEALAS++ VS +E+IT+
Sbjct: 61 GSGIPAEDVATAFLRHA-TSKVHTDGDLE---AIGTLGFRGEALASVTAVSKVELITRTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G + L G + GTT++ RDLFYN P R K+++ + ++V+
Sbjct: 117 DELEGTRIALAGGEVLEQGPAGCPQ--GTTILVRDLFYNTPARMKFLKKDVTEG-NAVRA 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
R+AL HP++S KFI E+ L T L+ + + G + L V+ G++
Sbjct: 174 VAERLALSHPEISLKFIKDGREE--LHTPGDGKLLSAVHAVLGRDFARDLLPVDYALGSV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I+G++ P + + + Q+ ++N R V K +AA ++K + + G+
Sbjct: 232 RITGFVLKPVSARANRNMQFFFLNGRLV------KSRTAMAA---LEQAYKGS--IMVGR 280
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
P +L++ P +L D+ P KT V F D V + A+++ +K +
Sbjct: 281 ------FPGCVLHIALPPALVDVNVHPAKTEVRFADEHAVFEAVYYAVKNTIAEKDTRPA 334
Query: 360 FDVDMLEDAE 369
+ E A+
Sbjct: 335 LRLPGTEQAK 344
Score = 48.1 bits (113), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
+V+ Q + +I V G L +ID+HAA ERI EE++ + G+ L +
Sbjct: 486 RVVGQCFETYILVEEGDALYLIDKHAAHERILYEEIKKQ---GQAAGQLLLAPRAVTLAR 542
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1287
E +L+NFA +++ G+ ++ G + + + + P V L +
Sbjct: 543 EEYAAVLENFA-LLRETGF--DMEDFGGAT--------------VLVRSAP----VYLRE 581
Query: 1288 VDLLEFLQQLADTD---GSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1344
+++ +++LA G TP + + +S ACR A+ GD P E A + + + +
Sbjct: 582 SEIVPAVEELAGKLAGFGKDLTPERIDELYHSVACRAAVKAGDKTGPEEAARLAKRVLEL 641
Query: 1345 SLCFQCAHGRPTTVPLVNLEALHKQIAQ 1372
C HGRP L E + KQ +
Sbjct: 642 DDVRYCPHGRPVAFVLTRGE-IEKQFGR 668
>gi|20455140|sp|Q9CDL1.2|MUTL_LACLA RecName: Full=DNA mismatch repair protein MutL
Length = 656
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 174/353 (49%), Gaps = 31/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ ++ + L RH ATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRH-ATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G + V KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 117 EEESGTKLVAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D
Sbjct: 174 IINRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK-- 297
E++GY+S P + + + + + IN R++ ++ N L+
Sbjct: 232 ELTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGY 272
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
G R P +L+++ +L D+ P K V ++A I +AI A
Sbjct: 273 GNRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAIDEA 325
>gi|306828751|ref|ZP_07461943.1| DNA mismatch repair protein HexB [Streptococcus mitis ATCC 6249]
gi|304428929|gb|EFM32017.1| DNA mismatch repair protein HexB [Streptococcus mitis ATCC 6249]
Length = 649
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQITIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EKVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E + + E
Sbjct: 330 -ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSKPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL EE ++ F+Q
Sbjct: 379 DHQVELTEEGKDLTLFAQ 396
>gi|347754192|ref|YP_004861756.1| DNA mismatch repair protein MutL [Candidatus Chloracidobacterium
thermophilum B]
gi|347586710|gb|AEP11240.1| DNA mismatch repair protein MutL [Candidatus Chloracidobacterium
thermophilum B]
Length = 656
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 173/352 (49%), Gaps = 27/352 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+ V N + +G V+ +V+E + N++DA A ++ + V +++ DD
Sbjct: 1 MSKIRILPDVVANRIAAGEVVERPASIVKECLENALDAQAHQIDLAVERGGKESIRIRDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+++D +L ERHA TSK+ ++ I TFGFRGEALA+I V+ + + TK H
Sbjct: 61 GEGMTQDDAILAFERHA-TSKI---RTAEELMAIQTFGFRGEALAAIGSVARVTLTTKLH 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G ++G K + + + GT ++ RDLF+N P RRK++++ + H +
Sbjct: 117 GATSGTEVCLEGGKLRH--VREVAAPGGTEILVRDLFFNLPARRKFLKTEATEAFH-ITN 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V AL HP+ F + ++L +++ A FG L V G +
Sbjct: 174 LVTHYALAHPQCGFTL--QHNGRQVLAVTATTDLRARAYQLFGANMLDSLAPVEFAQGGI 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ G++S P+ + + QY+++N R+V I + L SD+++ N G
Sbjct: 232 AVGGFVSRPHVQRTSRDGQYLFVNRRFVRDKLIGRAL---------SDAYR--NILPPG- 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
PA +L + P + D+ P KT V F+ + VL I A++ A
Sbjct: 280 -----VFPAAMLFVEVPPDMVDVNVHPQKTEVRFRTPQHVLESIVTAVQQAL 326
>gi|160938811|ref|ZP_02086162.1| hypothetical protein CLOBOL_03705 [Clostridium bolteae ATCC
BAA-613]
gi|158437774|gb|EDP15534.1| hypothetical protein CLOBOL_03705 [Clostridium bolteae ATCC
BAA-613]
Length = 763
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 174/355 (49%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L ++ N + +G V+ VV+EL+ N+VDA AT V V + C ++V D+
Sbjct: 1 MANITVLDQSTINKIAAGEVIERPASVVKELLENAVDAHATAVTVEIKDGGCSMIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI ++ + L RHA TSK+ ++D I + GFRGEALASI+ V+ +E+ITK
Sbjct: 61 GWGIPKEEIPLAFLRHA-TSKI---KTVEDLFTISSLGFRGEALASIAAVAQVELITKTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R ++G + G+++ GTT+++R+LFYN P R+K++++ + H V
Sbjct: 117 DSLTGSRYQIEGG--VEKGLEEIGAPDGTTIIARNLFYNTPARKKFLKTPMTEGAH-VAA 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +IAL HP +S +FI ++ L T + + L+ + FG E L V N+ +
Sbjct: 174 LVEKIALSHPDISIRFI--QNNQNKLYTSGNHNLKDLIYTVFGREIAGNLLPVEINEDWI 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++G+ P + S + ++ +IN RY+ I K + + +
Sbjct: 232 TVTGFTGKPVIARSNRNYENYFINGRYIKSSIISKAIEEAYKPYMMQHKY---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P +L+ D+ P K + F D E V + RA+ +A K
Sbjct: 282 -------PFTMLHFHIEPDTLDVNVHPTKMELRFADGEKVYHAVLRAVSNALAHK 329
>gi|322392517|ref|ZP_08065977.1| DNA mismatch repair protein HexB [Streptococcus peroris ATCC
700780]
gi|321144509|gb|EFX39910.1| DNA mismatch repair protein HexB [Streptococcus peroris ATCC
700780]
Length = 649
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 207/466 (44%), Gaps = 51/466 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+ ++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSNQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGQV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ D
Sbjct: 174 IVNRLGLAHPEISFSLIC--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMVEIENADLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++A + AI K +
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAI----AKSLKE 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFH---KECERITFQEF 414
+ D LE+ +R + Q++ L R++ F+ E R T E
Sbjct: 329 QTLIPDALENLAKSTVRNREKVEQTTLPL-----------RENTFYYEKNEPTRPTQAEV 377
Query: 415 QKDPVELAEENTEMEFFSQPK--HSSSLLDGSFAECLPIVPPKIDH 458
V L EE ++ F++ + FAE P ++DH
Sbjct: 378 ADHQVNLTEEKQDLNLFAKEALDQMTKPAKLHFAERKPASYDQLDH 423
>gi|307705926|ref|ZP_07642763.1| DNA mismatch repair protein mutL [Streptococcus mitis SK597]
gi|307620522|gb|EFN99621.1| DNA mismatch repair protein mutL [Streptococcus mitis SK597]
Length = 649
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 207/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTESTRPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL EE ++ F++
Sbjct: 379 DYQVELTEEGQDLTLFAK 396
>gi|302391924|ref|YP_003827744.1| DNA mismatch repair protein MutL [Acetohalobium arabaticum DSM
5501]
gi|302204001|gb|ADL12679.1| DNA mismatch repair protein MutL [Acetohalobium arabaticum DSM
5501]
Length = 660
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 179/349 (51%), Gaps = 27/349 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I +LP+ V + + +G V+ VV+ELV NS+DA + K+ + V ++V+D G G
Sbjct: 5 IKKLPQEVVSKIAAGEVIERPASVVKELVENSIDADSDKIEIKVNNGGKDLIQVIDTGYG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++R+ L ERHA TSK+ + +D I + GFRGEAL SI+ +S L + T+ +
Sbjct: 65 MTREDAELALERHA-TSKI---TEANDLFSIRSLGFRGEALPSIAAISRLTMKTRTEDKL 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + G + I+D +GT ++ +DLFYN PVR KY+++S ++ + V
Sbjct: 121 GGTLVKINGGEIK--KIEDAGCPIGTNIIVKDLFYNTPVRYKYLKTSATEI-RRISDIVN 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL +P+++FK ++ ++L T + + + ++S +G E + V+ D +++S
Sbjct: 178 RLALAYPEITFKL--SHNQKKVLETPGNGNLMDTILSVYGKEVAKSMIAVDYEDKYMQVS 235
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GY+S P S + K Q +IN RY+ + + ++ KA + L R
Sbjct: 236 GYVSKPNISRASKKHQSFFINRRYIKSRALSEAIS------------KAYHTLLAKGRH- 282
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P +L ++ L D+ P K V F + V + ++ ++ A
Sbjct: 283 ----PIAILTIKLNPVLVDVNVHPTKMEVNFSREKEVASVLQNGVKEAL 327
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 27/194 (13%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL-DAEQELVLPE 1228
L Q+ +I ++DQHAA ERI EL K E KS + L EL PE
Sbjct: 475 LGQIHNTYIIAQGEDGFYIVDQHAAHERILYNELMEKFKQAEIKSQSLLMPVRLELTNPE 534
Query: 1229 IGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDV 1288
I ++L+ +E +K+ G+ G +++ + AVP + L +
Sbjct: 535 I--EILEENSEHLKNLGF--EFEAFGGQTY--------------LVRAVPNL----LHKL 572
Query: 1289 DLLEFLQQLADT---DGSSTTPPSVLR-VLNSKACRGAIMFGDSLLPSECALIVEELKQT 1344
D+ E + D G P ++ +L +CRGAI G SL+P E ++++L+++
Sbjct: 573 DIKELCLDIIDNLLDKGKIQEPTEIIEDLLVIMSCRGAIKSGKSLVPGEMESLLQQLEES 632
Query: 1345 SLCFQCAHGRPTTV 1358
C HGRPT +
Sbjct: 633 GNQHTCPHGRPTII 646
>gi|116513153|ref|YP_812060.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris
SK11]
gi|385839547|ref|YP_005877177.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris A76]
gi|123025082|sp|Q02VS5.1|MUTL_LACLS RecName: Full=DNA mismatch repair protein MutL
gi|116108807|gb|ABJ73947.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris SK11]
gi|358750775|gb|AEU41754.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris A76]
Length = 656
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 227/494 (45%), Gaps = 57/494 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ V V ++V D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKITVSVEEAGLRLIEVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ ++ + L RH ATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRH-ATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSNA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + + KG L + K +GT + +LFYN P R KY++S ++ H +
Sbjct: 117 QEEAGTKLIAKGGTIETL--EPLAKRLGTKISVANLFYNTPARLKYIKSLQAELSH-ITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP++SF ++ E L T + ++ + +GI + E+N +D
Sbjct: 174 IINRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMREINGSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK-- 297
E++GY+S P + + + + + IN R++ ++ N L+
Sbjct: 232 ELTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGY 272
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
G R P +L+++ L D+ P K V ++ I +AI A ++
Sbjct: 273 GNRLMVGRFPFAVLSIKIDPKLADVNVHPTKQEVRLSKERELMTLISKAIDEA----LSE 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKD 417
+ LE+ + ++ S Q+ L ++PL ++D +E F+ + D
Sbjct: 329 GVLIPEALENLQGRVKEKETVSVQTELPLQNNPLYYDNVRQDFFVREEA---IFEINKND 385
Query: 418 PVE-LAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDHRVWTIESS-WFQDHQPSR 475
+ L E+N+ +QP+ S V KI R T+ESS F D P
Sbjct: 386 NSDSLTEQNSTDYTVNQPETGS-------------VSEKITDR--TVESSNEFTDRTPKN 430
Query: 476 HL--FSPPLENLKK 487
+ F +N++K
Sbjct: 431 SVSNFGVDFDNIEK 444
>gi|357055418|ref|ZP_09116486.1| hypothetical protein HMPREF9467_03458 [Clostridium clostridioforme
2_1_49FAA]
gi|355382537|gb|EHG29634.1| hypothetical protein HMPREF9467_03458 [Clostridium clostridioforme
2_1_49FAA]
Length = 687
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 173/355 (48%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L ++ N + +G V+ VV+EL+ N++DA AT V V + C ++V D+
Sbjct: 1 MANITVLDQSTINKIAAGEVIERPASVVKELLENAIDAHATAVTVEIKDGGCSMIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI ++ + L RHA TSK+ ++D I + GFRGEALASI+ V+ +E+ITK
Sbjct: 61 GWGIPKEEIPLAFLRHA-TSKI---KTVEDLFTISSLGFRGEALASIAAVAQVELITKTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R ++G + G+D+ GTT+++R LFYN P R+K++++ + H V
Sbjct: 117 NSLTGSRYQIEGG--VEKGLDEIGAPEGTTIIARSLFYNTPARKKFLKTPMTEGAH-VAA 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +IAL HP +S +FI ++ L T + + L+ + FG E L V N+ +
Sbjct: 174 LVEKIALSHPDISIRFI--QNNQNKLYTSGNHNLKDLIYTVFGREIAGNLLPVEINEDWI 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++G+ P + S + ++ +IN RY+ I K + + +
Sbjct: 232 TVTGFTGKPVIARSNRNYENYFINGRYIKSTIISKAIEEAYKPYMMQHKY---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P +L+ D+ P K + F D E V + RA+ +A K
Sbjct: 282 -------PFTMLHFHIEPDTLDVNVHPTKMELRFADGEKVYNAVLRAVSNALAHK 329
>gi|119899416|ref|YP_934629.1| DNA mismatch repair protein [Azoarcus sp. BH72]
gi|119671829|emb|CAL95743.1| DNA mismatch repair protein [Azoarcus sp. BH72]
Length = 621
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 180/380 (47%), Gaps = 35/380 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I RLP+ + N + +G V+ V++E++ N+VDAGA V V + GV +++
Sbjct: 1 MPQIQRLPDLLVNQIAAGEVVERPASVLKEVLENAVDAGARAVEVQLEQGGVRR--IRIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
DDG GI+RD L L ERHA TSK+ A +DD +GT GFRGEALA+I+ V+ I ++
Sbjct: 59 DDGCGIARDELALALERHA-TSKI---ATLDDLERVGTMGFRGEALAAIAGVARTVITSR 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
A G + +R + GS + + GT V DL+YN P RRK+++S + H
Sbjct: 115 AEGAAHAWR--IDGSD---RSLAPAALNQGTVVDVADLYYNTPARRKFLKSEGTEYAHC- 168
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R+AL P ++ + + + P+ + + G + + V A G
Sbjct: 169 DEVFRRVALARPDIALQ---LSHNGRVAHRLPVGEPVRRIAALMGDDFLAQARAVVAEGG 225
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
L ++GY S P S + + QY ++N R+V KLL H +A L
Sbjct: 226 PLRLTGYASLPAYSRASRDAQYFFVNGRFVRD----KLLTHAL--------RQAYADILH 273
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
G R PAY+L L + D+ P K V F+D V F+ A+ A + A
Sbjct: 274 GARH-----PAYVLFLELDPAGVDVNVHPAKIEVRFRDSRAVHQFVFHAVSRALAESGAA 328
Query: 358 DSFDVDMLEDAELPLESSRF 377
+ E A LP R
Sbjct: 329 LAGGNGAGEPAPLPSSGQRV 348
>gi|281492891|ref|YP_003354871.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
KF147]
gi|281376543|gb|ADA66029.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
KF147]
Length = 656
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 174/353 (49%), Gaps = 31/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ ++ + L RH ATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRH-ATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G + + KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 117 EEESGTKLIAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D
Sbjct: 174 IINRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK-- 297
E++GY+S P + + + + + IN R++ ++ N L+
Sbjct: 232 ELTGYVSIPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGY 272
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
G R P +L+++ +L D+ P K V ++A I +AI A
Sbjct: 273 GNRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAIDEA 325
>gi|385831794|ref|YP_005869607.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
CV56]
gi|326407802|gb|ADZ64873.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
CV56]
Length = 656
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 174/353 (49%), Gaps = 31/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ ++ + L RH ATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRH-ATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G + + KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 117 EEESGTKLIAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D
Sbjct: 174 IINRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK-- 297
E++GY+S P + + + + + IN R++ ++ N L+
Sbjct: 232 ELTGYVSIPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGY 272
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
G R P +L+++ +L D+ P K V ++A I +AI A
Sbjct: 273 GNRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAIDEA 325
>gi|227510188|ref|ZP_03940237.1| DNA mismatch repair protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190393|gb|EEI70460.1| DNA mismatch repair protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 651
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 168/355 (47%), Gaps = 29/355 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYV-KVVDD 59
+ I+ LP + N + +G V+ VV+ELV N++DA +T++ + V V KVVDD
Sbjct: 4 LKQIHELPAILANQISAGEVVERPASVVKELVENAIDAHSTEIDITVEDSGLKVIKVVDD 63
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + RHA TSK+ + D + T GFRGEAL SIS VS +E+ T
Sbjct: 64 GDGIDSSQVQTAFLRHA-TSKI---TEQRDLFRVRTLGFRGEALPSISSVSNVELKTSTG 119
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G V KG K + + RK GTTV+ LFYN P R KY+ SSP L +
Sbjct: 120 SV--GTEVVFKGGKFISQQASESRK--GTTVIVSSLFYNTPARLKYL-SSPNTELSKISD 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP+VSF FI + ELL T L +L + +G++ S + + + +
Sbjct: 175 IVNRLALSHPEVSFSFIS--NGRELLRTSGRGDLLQVLGAIYGVKTVSKMQPIKSKTPDI 232
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY+S P + S + + + +N RYV P+ K NG+ G
Sbjct: 233 SIDGYVSLPELTRSSRNYISLILNGRYVRNFPLTK---------------SVINGY--GS 275
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
+ P ++N+ +L D+ P K V + + + AIR K
Sbjct: 276 KLMIGRFPIAVVNISADPALIDVNVHPTKQEVRISEEPKIGGMLSNAIREMLADK 330
>gi|227524331|ref|ZP_03954380.1| DNA mismatch repair protein [Lactobacillus hilgardii ATCC 8290]
gi|227088562|gb|EEI23874.1| DNA mismatch repair protein [Lactobacillus hilgardii ATCC 8290]
Length = 651
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 167/352 (47%), Gaps = 29/352 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYV-KVVDDGSG 62
I+ LP + N + +G V+ VV+ELV N++DA +T++ + V V KVVDDG G
Sbjct: 7 IHELPAILANQISAGEVVERPASVVKELVENAIDAHSTEIDITVEDSGLKVIKVVDDGDG 66
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + RHA TSK+ + D + T GFRGEAL SIS VS +E+ T
Sbjct: 67 IDSSQVQTAFLRHA-TSKI---TEQRDLFRVRTLGFRGEALPSISSVSNVELKTSTGSV- 121
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V KG K + + RK GTTV+ LFYN P R KY+ SSP L + V
Sbjct: 122 -GTEVVFKGGKFISQQASESRK--GTTVIVSSLFYNTPARLKYL-SSPNTELSKISDIVN 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP+VSF FI + ELL T L +L + +G++ S + + + + I
Sbjct: 178 RLALSHPEVSFSFIS--NGRELLRTSGRGDLLQVLGAIYGVKTVSKMQPIKSKTPDISID 235
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GY+S P + S + + + +N RYV P+ K NG+ G +
Sbjct: 236 GYVSLPELTRSSRNYISLILNGRYVRNFPLTK---------------SVINGY--GSKLM 278
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P ++N+ +L D+ P K V + + + AIR K
Sbjct: 279 IGRFPIAVVNISADPALIDVNVHPTKQEVRISEEPKIGGMLSNAIREMLADK 330
>gi|307708033|ref|ZP_07644502.1| DNA mismatch repair protein MutL [Streptococcus mitis NCTC 12261]
gi|307615923|gb|EFN95127.1| DNA mismatch repair protein MutL [Streptococcus mitis NCTC 12261]
Length = 649
Score = 142 bits (359), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 207/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERI--TFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E I + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTESIRSSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL EE ++ F++
Sbjct: 379 DYQVELTEEGQDLTLFAK 396
>gi|417847742|ref|ZP_12493704.1| DNA mismatch repair protein [Streptococcus mitis SK1073]
gi|339456576|gb|EGP69167.1| DNA mismatch repair protein [Streptococcus mitis SK1073]
Length = 649
Score = 142 bits (359), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 207/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ +R ++ Q+ PLK + +++++ E R + E
Sbjct: 330 -TLIPDALENLAKSTVRNRQKAEQTIL-----PLKE-----NTLYYEKTEPTRPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VELA+E ++ F++
Sbjct: 379 DYQVELADEGQDLTLFAK 396
>gi|293364379|ref|ZP_06611105.1| DNA mismatch repair protein HexB [Streptococcus oralis ATCC 35037]
gi|307702655|ref|ZP_07639607.1| DNA mismatch repair protein mutL [Streptococcus oralis ATCC 35037]
gi|291317225|gb|EFE57652.1| DNA mismatch repair protein HexB [Streptococcus oralis ATCC 35037]
gi|307623771|gb|EFO02756.1| DNA mismatch repair protein mutL [Streptococcus oralis ATCC 35037]
Length = 649
Score = 142 bits (359), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQITIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EKVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTEVTRASQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL EE ++ F++
Sbjct: 379 DHQVELTEEGQDLTLFAK 396
>gi|418964339|ref|ZP_13516153.1| DNA mismatch repair protein [Streptococcus anginosus subsp. whileyi
CCUG 39159]
gi|383341144|gb|EID19412.1| DNA mismatch repair protein [Streptococcus anginosus subsp. whileyi
CCUG 39159]
Length = 688
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 169/350 (48%), Gaps = 31/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 41 MSKIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLRSIQVIDN 100
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEAL SI+ VS L I T
Sbjct: 101 GEGIEHEEVSLALRRH-ATSKIKKQADL---FRIRTLGFRGEALPSIASVSRLTIETATS 156
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G + +G + L D GT + DLF+N P R KYM+S ++ H V
Sbjct: 157 SGAHGTLLIAQGGEVETL--DPSSCPRGTKIKVEDLFFNTPARLKYMKSQQAELSHIV-D 213
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+V+F ++ E+ T + + + +G+ + E+ A+D
Sbjct: 214 VINRLSLAHPEVAFTLVN--DGKEMTRTAGTGNLRQAIAGIYGLTTAKKMIEILASDLDF 271
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 272 EVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 312
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
SK P ++++R L D+ P K V ++A I +AI
Sbjct: 313 GSKLMVGRFPIAVIDIRIDPYLADVNVHPTKQEVRISKERELMALISQAI 362
>gi|160933109|ref|ZP_02080498.1| hypothetical protein CLOLEP_01952 [Clostridium leptum DSM 753]
gi|156868183|gb|EDO61555.1| DNA mismatch repair domain protein [Clostridium leptum DSM 753]
Length = 747
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 180/355 (50%), Gaps = 31/355 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I+ L + V + +G V+ + V++ELV NS+DAGAT + V + G+ Y++V
Sbjct: 1 MAKIHVLEKHVAELIAAGEVVERPSSVIKELVENSIDAGATTISVEIQRGGIA--YMRVT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI+R+ + R+A TSK+ D+D GIGT GFRGEALASI VS + ++T+
Sbjct: 59 DNGGGIAREDVPKAFLRNA-TSKVESAEDLD---GIGTLGFRGEALASICAVSRVTLLTR 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G ++G + L L +D G T+V RDLFYN P R K+++ + ++V
Sbjct: 115 TEEELAGTSYQIEGGEELAL--EDAGCAKGCTIVVRDLFYNTPARMKFLKKDVSEA-NAV 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R AL HP++SF+F+ E L T + + + +G + + L V+
Sbjct: 172 AGVMDRAALSHPEISFRFV--RDHKETLSTPGDRQLRSCIYAVYGKDFTAGLIPVDYAYN 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+++ G+IS P + ++ Q+ +IN R+V + L +F S +
Sbjct: 230 GIKVRGFISKPSAARPNRSMQHFFINGRFVKS---KTAMVALEQAFKGS--------IMA 278
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
GK P+ +L+L P D+ P K V F + +P+ + ++SA +
Sbjct: 279 GK------FPSCVLHLSVPWEAVDVNVHPSKIEVRFLNEKPIFDAVYHGVKSALL 327
>gi|422822658|ref|ZP_16870851.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK353]
gi|422863623|ref|ZP_16910254.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK408]
gi|324989666|gb|EGC21610.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK353]
gi|327472200|gb|EGF17637.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK408]
Length = 688
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 220/470 (46%), Gaps = 61/470 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 42 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 101
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 102 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 157
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 158 AGQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 212
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 213 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 269
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 270 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 310
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 311 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAISTSLKEQ 370
Query: 355 IAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ER 408
D++ DA L S + Q+S L + L +Q D + ++
Sbjct: 371 --------DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQ 422
Query: 409 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
++F+E DPV + NT+ + ++P+ +S FAE P ++DH
Sbjct: 423 LSFEE-TADPV---QANTDEK--AEPQSTSV----KFAERKPASYDQLDH 462
>gi|422849892|ref|ZP_16896568.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK115]
gi|325689188|gb|EGD31195.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK115]
Length = 688
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 216/470 (45%), Gaps = 61/470 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 42 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 101
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 102 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 157
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ +GT + DLF+N P R KYM+S ++ H
Sbjct: 158 AGQHGTLLVAQGGE-----IEEHEPTSSPLGTKIKIEDLFFNTPARLKYMKSQQAELSHI 212
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 213 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 269
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 270 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 310
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 311 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ 370
Query: 355 IAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ER 408
D++ DA L S + Q+S L + L +Q D + ++
Sbjct: 371 --------DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQ 422
Query: 409 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
++F+E K E +E E P+ +S FAE P+ ++DH
Sbjct: 423 LSFEESAKPVHEATDEKVE------PQSTSV----KFAERKPVSYDQLDH 462
>gi|422877524|ref|ZP_16923994.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1056]
gi|332360163|gb|EGJ37977.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1056]
Length = 647
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 219/471 (46%), Gaps = 63/471 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 117 TGQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 172 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 270 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ 329
Query: 355 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKN----LAKQRDHMFHK---ECE 407
D++ DA L S + + S PLK K+R+ F K +
Sbjct: 330 --------DLIPDALENLAKSTVK-RATKPEQTSLPLKENRLYYDKERNDFFLKPEVAEQ 380
Query: 408 RITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
+++F+E K PV A + S+P+ +S FAE P+ ++DH
Sbjct: 381 QLSFEESAK-PVHQATDEK-----SEPQPTSV----KFAERRPVSYDQLDH 421
>gi|335028886|ref|ZP_08522402.1| DNA mismatch repair protein [Streptococcus infantis SK1076]
gi|334270253|gb|EGL88659.1| DNA mismatch repair protein [Streptococcus infantis SK1076]
Length = 649
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 197/436 (45%), Gaps = 43/436 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+ ++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSRQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF + E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSL--LSDGKEMTRTAGTGQLRQAIAGIYGLASAKKMVEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P +++++ L D+ P K V ++A + AI K +
Sbjct: 273 GSKLMVGRFPLAVIHIQIDPYLADVNVHPTKQEVRISKERELMALVSEAI----AKSLKE 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKD 417
+ D LE+ +R + Q++ L + L + E R E
Sbjct: 329 QTLIPDALENLAKSTIRNREKVEQTTLPLRENTL--------YYEKNEPTRPKQAEVADH 380
Query: 418 PVELAEENTEMEFFSQ 433
V L EE ++ F++
Sbjct: 381 QVNLTEEKQDLNLFAK 396
>gi|418965199|ref|ZP_13516981.1| DNA mismatch repair protein [Streptococcus constellatus subsp.
constellatus SK53]
gi|383343314|gb|EID21502.1| DNA mismatch repair protein [Streptococcus constellatus subsp.
constellatus SK53]
Length = 648
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 209/457 (45%), Gaps = 51/457 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 1 MSKIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLKSIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEAL SI+ VS L I T +
Sbjct: 61 GEGIEHEEVSLALRRH-ATSKIKKQADL---FRIRTLGFRGEALPSIASVSRLTIETATN 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G R + +G + ++ GT + DLF+N P R KYM+S ++ H V
Sbjct: 117 GGTHGTRLIAQGGEI--ETVEPSSCPKGTKIKVEDLFFNTPARLKYMKSQQAELSHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+V+ FI + EL T + + + +G+ + E++A++
Sbjct: 174 MINRLSLAHPEVA--FILLNDGKELTRTAGTGNLRQAIAGIYGLTTAKKMIEISASNLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++ ++ L D+ P K V ++ I +AI ++ ++
Sbjct: 273 GSKLMVGRFPIAVIAIQIDPYLADVNVHPTKQEVRISKERELMVLISQAIAASLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRF----QSHQSSTHLHSSPLKNLAKQRDHMFHKEC------- 406
D++ DA L S +S Q+S L + L ++ D +
Sbjct: 330 -----DLIPDALENLAKSTINRANKSEQTSLPLKENRLYYDKERNDFFVRPQVSESNLPF 384
Query: 407 -ERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLD 442
E TF + D LA ++F ++ S LD
Sbjct: 385 EENATFDQQHTDTDMLASRAVSVKFAARQTPSYDQLD 421
>gi|291536170|emb|CBL09282.1| DNA mismatch repair protein MutL [Roseburia intestinalis M50/1]
gi|291538967|emb|CBL12078.1| DNA mismatch repair protein MutL [Roseburia intestinalis XB6B4]
Length = 686
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 178/359 (49%), Gaps = 35/359 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ + VV+ELV N++DA AT V V + ++++ D+
Sbjct: 1 MPEITLLSQETIDKIAAGEVVERPSSVVKELVENAIDAKATAVTVEIKEGGISFIRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI R + L RH+ TSK+ + D+ I + GFRGEAL+SI+ VS +E+ITK +
Sbjct: 61 GCGIERAQVPLAFLRHS-TSKIKSVEDL---MSITSLGFRGEALSSIAAVSQVELITKTY 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
G G R V++GSK + E +++ GTT + R+LFYN P RRK+++++ + +
Sbjct: 117 GELTGTRYVIEGSK------EKENEEIGAPEGTTFIVRNLFYNTPARRKFLKTAQTEG-N 169
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
+ + R+AL HP VSFKFI+ + + T +S ++ +G + S L E++
Sbjct: 170 YINDLMERLALSHPGVSFKFIN--NGQTKMHTSGNSREKDMIYHIYGRDITSGLLEIDHK 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ + G+I P S + F+ +IN RY+ + K + +A GF
Sbjct: 228 NEYFHVKGFIGKPLISRGNRNFENYFINGRYIKSALLSKSIE------------EAYKGF 275
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
L P +L L D+ P K + F + E + + IR A K
Sbjct: 276 L-----MQHQYPFCVLYFSMDTDLLDVNVHPTKMELRFSNNEAIYKTLFEIIRGALTHK 329
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERI----RLEELRHKVLSGEGKS 1214
+ K + K++ Q+ + V L +IDQHAA E++ ++++R K S + S
Sbjct: 490 LTKDAKKKHKIIGQLFDTYWMVEYEDKLFIIDQHAAHEKVLYEKTMKKVREKTFSSQTLS 549
Query: 1215 VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITL 1274
+ L + EI ++L+ + EQI +G+ I G + + +
Sbjct: 550 PPIILT---LSIEEI--EMLEKYREQIDAFGY--EIEPFGGKEY--------------AV 588
Query: 1275 LAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSEC 1334
A+P F + LE L A+ + + +P +++ + S +C+ AI + E
Sbjct: 589 TAIPADFTGIDTKTMFLEMLDDFANIN-ENDSPNAIMEKVASMSCKAAIKGNQHISRPEA 647
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
+++EL + + C HGRPT + + E
Sbjct: 648 ERLIDELLELENPYNCPHGRPTIISMTKYE 677
>gi|339640427|ref|ZP_08661871.1| DNA mismatch repair protein [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339453696|gb|EGP66311.1| DNA mismatch repair protein [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 648
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 215/472 (45%), Gaps = 64/472 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSHFTIETATE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
+G V +G + E+ + VGT + DLF+N P R KYM+S ++
Sbjct: 117 SGQHGTLLVAQGGEI-------EKHEPASSPVGTKIKVEDLFFNTPARLKYMKSQQAELS 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
H V + R++L HP+V+F I EL T S + + +G+ + E++A
Sbjct: 170 HIV-DVINRLSLAHPEVAFTLIS--DGRELTRTAGSGNLRQAIAGIYGLATAKKMVEISA 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
+D E+SGY+S P + + + + + IN RY+ ++ N
Sbjct: 227 SDLDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRA 267
Query: 295 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
L G SK P ++N++ L D+ P K V ++ I +AI ++
Sbjct: 268 ILDGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMTLISQAIATSLK 327
Query: 353 KKIAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC-- 406
++ D++ DA L S + Q+S L + L +Q D +
Sbjct: 328 EQ--------DLIPDALENLAKSTVKRANKPEQTSLPLKENRLYYDKEQNDFFLKPQVAE 379
Query: 407 ERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
++++F+E + E +E E P S+S+ FAE P ++DH
Sbjct: 380 QQLSFEESAESVHEATDEKAE------PPQSTSV---KFAERKPASYDQLDH 422
>gi|392429490|ref|YP_006470504.1| DNA mismatch repair protein HexB [Streptococcus intermedius JTH08]
gi|419776902|ref|ZP_14302821.1| DNA mismatch repair protein, C-terminal domain / MutL C-terminal
dimerization domain multi-domain protein [Streptococcus
intermedius SK54]
gi|383845587|gb|EID82990.1| DNA mismatch repair protein, C-terminal domain / MutL C-terminal
dimerization domain multi-domain protein [Streptococcus
intermedius SK54]
gi|391758639|dbj|BAM24256.1| DNA mismatch repair protein HexB [Streptococcus intermedius JTH08]
Length = 648
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 189/405 (46%), Gaps = 45/405 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 1 MSKIIELPEKLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLKSIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEAL SI+ VS L I T
Sbjct: 61 GEGIEHEEVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEALPSIASVSCLTIETATE 116
Query: 120 GRPNGYRKVMKGS--KCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G V +G +C ++ VGT + +LF+N P R KYM+S ++ H V
Sbjct: 117 TDQYGTLLVARGGEIEC----VEPTSSTVGTKIKVENLFFNTPARLKYMKSQQAELSHIV 172
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R++L HP+++F I+ ++ T + + + +G+ + E++A++
Sbjct: 173 -DVMNRLSLAHPEIAFTLIN--DGKKMTQTVGTGNLRQAIAGVYGLTTAKKMIEISASNL 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 298 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW---- 351
G SK P ++ ++ L D+ P K V ++ I +AI ++
Sbjct: 271 GYGSKLMVGRFPIAVIAIQIDPYLADVNVHPTKQEVRISKERELMVLISQAIAASLKEYD 330
Query: 352 -----MKKIAHDSFD-VDMLEDAELPLESSRFQSHQSSTHLHSSP 390
++ +A + + V M E LPL+ +R Q T P
Sbjct: 331 LIPDALENLAKSTINRVSMPEQTSLPLKENRLYYDQGRTDFFVKP 375
>gi|240146293|ref|ZP_04744894.1| DNA mismatch repair protein MutL [Roseburia intestinalis L1-82]
gi|257201597|gb|EEU99881.1| DNA mismatch repair protein MutL [Roseburia intestinalis L1-82]
Length = 686
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 178/359 (49%), Gaps = 35/359 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ + VV+ELV N++DA AT V V + ++++ D+
Sbjct: 1 MPEITLLSQETIDKIAAGEVVERPSSVVKELVENAIDAKATAVTVEIKEGGISFIRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI R + L RH+ TSK+ + D+ I + GFRGEAL+SI+ VS +E+ITK +
Sbjct: 61 GCGIERAQVPLAFLRHS-TSKIKSVEDL---MSITSLGFRGEALSSIAAVSQVELITKTY 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
G G R V++GSK + E +++ GTT + R+LFYN P RRK+++++ + +
Sbjct: 117 GELTGTRYVIEGSK------EKENEEIGAPEGTTFIVRNLFYNTPARRKFLKTAQTEG-N 169
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
+ + R+AL HP VSFKFI+ + + T +S ++ +G + S L E++
Sbjct: 170 YINDLMERLALSHPGVSFKFIN--NGQTKMHTSGNSREKDMIYHIYGRDITSGLLEIDHK 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ + G+I P S + F+ +IN RY+ + K + +A GF
Sbjct: 228 NEYFHVKGFIGKPLISRGNRNFENYFINGRYIKSALLSKSIE------------EAYKGF 275
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
L P +L L D+ P K + F + E + + IR A K
Sbjct: 276 L-----MQHQYPFCVLYFSMDTDLLDVNVHPTKMELRFSNNEAIYKTLFEIIRGALTHK 329
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERI----RLEELRHKVLSGEGKS 1214
+ K + K++ Q+ + V L +IDQHAA E++ ++++R K S + S
Sbjct: 490 LTKDAKKKHKIIGQLFDTYWMVEYEDKLFIIDQHAAHEKVLYEKTMKKVREKTFSSQTLS 549
Query: 1215 VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITL 1274
+ L + EI ++L+ + EQI +G+ I G + + +
Sbjct: 550 PPIILT---LSIEEI--EMLEKYREQIDAFGY--EIEPFGGKEY--------------AV 588
Query: 1275 LAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSEC 1334
A+P F + LE L A+ + + +P +++ + S +C+ AI + E
Sbjct: 589 TAIPADFTGIDTKTMFLEMLDDFANIN-ENDSPNAIMEKVASMSCKAAIKGNQHISRPEA 647
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
+++EL + + C HGRPT + + E
Sbjct: 648 ERLIDELLELENPYNCPHGRPTIISMTKYE 677
>gi|306826020|ref|ZP_07459356.1| DNA mismatch repair protein HexB [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304431736|gb|EFM34716.1| DNA mismatch repair protein HexB [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 649
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 211/466 (45%), Gaps = 51/466 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAMD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EI+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++ + AI K +
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMKLVSEAI----AKSLKE 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITF---QEF 414
+ D LE+ L + R T L PLK ++M + E IT E
Sbjct: 329 QTLIPDALEN--LAKSTLRNCEKVEQTTL---PLK------ENMLYYEQPAITSPTQAEV 377
Query: 415 QKDPVELAEENTEMEFFSQP--KHSSSLLDGSFAECLPIVPPKIDH 458
VEL EE ++ F++ + + FAE P+ ++DH
Sbjct: 378 ADHQVELTEEGQDLTLFAKETLEQLTKPAKLHFAERKPVSYDQLDH 423
>gi|58336746|ref|YP_193331.1| DNA mismatch repair protein [Lactobacillus acidophilus NCFM]
gi|227903307|ref|ZP_04021112.1| DNA mismatch repair protein [Lactobacillus acidophilus ATCC 4796]
gi|81311521|sp|Q5FLX4.1|MUTL_LACAC RecName: Full=DNA mismatch repair protein MutL
gi|58254063|gb|AAV42300.1| DNA mismatch repair protein [Lactobacillus acidophilus NCFM]
gi|227868936|gb|EEJ76357.1| DNA mismatch repair protein [Lactobacillus acidophilus ATCC 4796]
Length = 631
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 205/441 (46%), Gaps = 47/441 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MPKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI+RD + L RH ATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRH-ATSKISNEHDL---FKVATLGFRGEALASISAVSHVEILTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G G+K G +D GT + RDLF+N P R KY++ SP+ + +
Sbjct: 115 TKGAIGVKATFSGGNKK---GQEDAAAREGTQITVRDLFFNTPARLKYLR-SPRTEIMKI 170
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R+AL +P VSF + + LL T + + + + +G ++E A D
Sbjct: 171 VDIINRLALGYPSVSFTLSN--TGKVLLRTPGNGNLKQTVANVYGRHIAEKMEEFEAKDN 228
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ISG +S P + S + F + +N RY+ +++ N +
Sbjct: 229 DFKISGLMSKPELTRSTRNFVSILLNGRYIR-------------------NFQLNTAIMD 269
Query: 298 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
G +K A P +L ++ L D+ P K V + + I I + ++KK
Sbjct: 270 GYGAKLAARHYPIIVLAIQVDPLLVDVNVHPTKQEVRLSKEKELSRLITSTISNVFIKKT 329
Query: 356 AHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQ 415
S ++ E ++ +F +Q+ N A+++ H+ E+ EF
Sbjct: 330 EQTSAFANLENKRETLVDQLQFNLNQNVV--------NTARKKTPEIHENNEK---PEFL 378
Query: 416 KDPVELAEENTEMEFFSQPKH 436
P + EE T+ + P+
Sbjct: 379 AKPKKPEEEKTDYVDLNIPRE 399
>gi|270291963|ref|ZP_06198178.1| DNA mismatch repair protein HexB [Streptococcus sp. M143]
gi|270279491|gb|EFA25333.1| DNA mismatch repair protein HexB [Streptococcus sp. M143]
Length = 649
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 173/357 (48%), Gaps = 31/357 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAISNSLREQ 329
>gi|420143116|ref|ZP_14650619.1| DNA mismatch repair protein mutL [Lactococcus garvieae IPLA 31405]
gi|391856921|gb|EIT67455.1| DNA mismatch repair protein mutL [Lactococcus garvieae IPLA 31405]
Length = 629
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 176/357 (49%), Gaps = 31/357 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E++ N + +G V+ VV+ELV NS+DAGAT++ V + ++V+D+
Sbjct: 1 MGKIIELDESLANQIAAGEVVERPASVVKELVENSIDAGATRIIVKIQESGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G+GI ++ + +RH ATSK+ + AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GTGIEKEDVAKSLKRH-ATSKIKNKADL---FKIRTLGFRGEAMPSIASVSEFSIETSVT 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G R V G K L +R+ GT V ++LFYN P R KY++S ++ H +
Sbjct: 117 DEESGTRLVSHGGKVDTLEAIAQRE--GTKVTVQNLFYNTPARLKYIRSLQAELSH-ITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R ++ HP++SF I+ EL+ T + ++ S +G+ + +V A D
Sbjct: 174 VINRQSMAHPEISFTLIN--EGRELMKTAGNGDLRQVIASVYGLPTAKKMLKVEAEDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK-- 297
ISGY+S P + + + + + IN R++ ++ N L+
Sbjct: 232 TISGYVSLPELTRANRNYITLMINGRFI-------------------KNFLLNRAILEGY 272
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G R P +L++ L D+ P K V ++ I AI+S ++++
Sbjct: 273 GNRLMVGRFPIVVLSIEIDPQLADVNVHPTKQEVRLSKERELMRLITEAIQSVFVEQ 329
>gi|390444465|ref|ZP_10232242.1| DNA mismatch repair protein mutL [Nitritalea halalkaliphila LW7]
gi|389664472|gb|EIM75964.1| DNA mismatch repair protein mutL [Nitritalea halalkaliphila LW7]
Length = 601
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 179/366 (48%), Gaps = 36/366 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+A+ N + +G V+ ++EL+ N+VDAGAT + V + ++V+D+G G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASALKELLENAVDAGATHIQVLIKEAGKQLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ +D I TFGFRGEALASI+ V+ +E+ TK
Sbjct: 65 MSGTDARMSFERHA-TSKI---RASEDLFAIKTFGFRGEALASIAAVAQVEMKTKRAADE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R +++GS+ E+K GT + ++LF+N P RR +++S+ ++ H V+
Sbjct: 121 LGTRLLIEGSEV------KEQKPAALPDGTAIAVKNLFFNVPARRNFLKSNAVEMRHLVE 174
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ R+AL HP++ + + +D L +SS +++ G + S L
Sbjct: 175 EFQ-RVALAHPEIK---MSLHQQDMELYQLPASSLQQRIVALMGKQYRSQLIAAQEESPF 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L ISG++ P + K QY+++N RY+ +H + C+ A G +
Sbjct: 231 LTISGFVGKPELARKTKGEQYLFVNHRYIRSPYLHHAV--------CT----AYEGLI-- 276
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
S P Y+L L D+ P KT + F D + ++ A+R A +
Sbjct: 277 ---ASDLHPFYVLFLEIDPKHIDINVHPTKTEIKFDDERTIYGVVKTALRQALGGHLVVP 333
Query: 359 SFDVDM 364
+ D D+
Sbjct: 334 TIDFDL 339
>gi|347522501|ref|YP_004780072.1| DNA mismatch repair protein MutL [Lactococcus garvieae ATCC 49156]
gi|385833885|ref|YP_005871660.1| DNA mismatch repair protein MutL [Lactococcus garvieae Lg2]
gi|343181069|dbj|BAK59408.1| DNA mismatch repair protein MutL [Lactococcus garvieae ATCC 49156]
gi|343183038|dbj|BAK61376.1| DNA mismatch repair protein MutL [Lactococcus garvieae Lg2]
Length = 629
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 176/357 (49%), Gaps = 31/357 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E++ N + +G V+ VV+ELV NS+DAGAT++ V + ++V+D+
Sbjct: 1 MGKIIELDESLANQIAAGEVVERPASVVKELVENSIDAGATRIIVKIQESGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G+GI ++ + +RH ATSK+ + AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GTGIEKEDVAKSLKRH-ATSKIKNKADL---FKIRTLGFRGEAMPSIASVSEFSIETSVT 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G R V G K L +R+ GT V ++LFYN P R KY++S ++ H +
Sbjct: 117 DEESGTRLVSHGGKVDTLEAIAQRE--GTKVTVQNLFYNTPARLKYIRSLQAELSH-ITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R ++ HP++SF I+ EL+ T + ++ S +G+ + +V A D
Sbjct: 174 VINRQSMAHPEISFTLIN--EGRELMKTAGNGDLRQVIASVYGLPTAKKMLKVEAEDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK-- 297
ISGY+S P + + + + + IN R++ ++ N L+
Sbjct: 232 TISGYVSLPELTRANRNYITLMINGRFI-------------------KNFLLNRAILEGY 272
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G R P +L++ L D+ P K V ++ I AI+S ++++
Sbjct: 273 GNRLMVGRFPIVVLSIEIDPQLADVNVHPTKQEVRLSKERELMRLITEAIQSVFVEQ 329
>gi|220917323|ref|YP_002492627.1| DNA mismatch repair protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|254766155|sp|B8J9F5.1|MUTL_ANAD2 RecName: Full=DNA mismatch repair protein MutL
gi|219955177|gb|ACL65561.1| DNA mismatch repair protein MutL [Anaeromyxobacter dehalogenans
2CP-1]
Length = 607
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 173/362 (47%), Gaps = 38/362 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I+ LP + N + +G V+ +V+ELV N++DAGAT V V V V+V DD
Sbjct: 1 MPRIHVLPPGLVNQIAAGEVVERPASIVKELVENALDAGATSVGVDVEEGGLALVRVADD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSG+ RD +L ERHA TSKL D + IGT GFRGEA+ +I+ VS + T A
Sbjct: 61 GSGMDRDDALLALERHA-TSKL---RDAEGLAAIGTMGFRGEAVPAIASVSRFRLDTSAG 116
Query: 120 GRPNGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R ++G LG + + GTTV RDLF+N P RRK+M+++ + H V
Sbjct: 117 EDGAGTRVEIEGG---VLGEVAPVARPRGTTVEVRDLFFNTPARRKFMRAASTEAGH-VS 172
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDG 237
+ V+R+AL P V F + S L+ + LA + G E L V+A G
Sbjct: 173 EAVIRLALARPDVGFT---LRSAGRLVLGARAGGGLADRAGQALGREAHRHLLPVDARRG 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVC-KGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ + G I SP S + Y+++N RYV + H +L A +
Sbjct: 230 EVRVHGLICSPDHSEATGRALYLFVNGRYVRDRAAAHAVLRAFAGTLPPGRH-------- 281
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-W 351
PA +L + P D+ P K V F + ++ + + A+R+A W
Sbjct: 282 ----------PAGVLFVELPLHRVDVNVHPQKLEVRFAEGREVFDALFHTVAGALRTAPW 331
Query: 352 MK 353
++
Sbjct: 332 LR 333
>gi|421489398|ref|ZP_15936780.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK304]
gi|400366030|gb|EJP19072.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK304]
Length = 649
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EI+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSRPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL EE ++ F++
Sbjct: 379 DHQVELTEEGRDLTLFAK 396
>gi|335032067|ref|ZP_08525476.1| DNA mismatch repair protein MutL [Streptococcus anginosus SK52 =
DSM 20563]
gi|333767933|gb|EGL45148.1| DNA mismatch repair protein MutL [Streptococcus anginosus SK52 =
DSM 20563]
Length = 648
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 172/354 (48%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 1 MSKIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLRSIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEAL SI+ VS L I T
Sbjct: 61 GEGIEHEEVSLALRRH-ATSKIKKQADL---FRIRTLGFRGEALPSIASVSRLTIETATS 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G + +G + L + GT + DLF+N P R KYM+S ++ H V
Sbjct: 117 SGAHGTLLIAQGGEVETL--EPSSCPRGTKIKVEDLFFNTPARLKYMKSQQAELSHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+V+F ++ E+ T + + + +G+ + E++A+D
Sbjct: 174 VMNRLSLAHPEVAFTLVN--DGKEMTRTAGTGNLRQAIAGIYGLTTAKKMIEISASDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P ++++R L D+ P K V ++A I +AI ++
Sbjct: 273 GSKLMVGRFPIAVIDIRIDPYLADVNVHPTKQEVRISKERELMALISQAIAASL 326
>gi|422881008|ref|ZP_16927464.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK355]
gi|332365450|gb|EGJ43211.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK355]
Length = 649
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 215/470 (45%), Gaps = 60/470 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 2 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKTIQVTDN 61
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 62 GEGIDHQDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 117
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G R V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 118 AGQHGTRLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 172
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 173 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 229
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 230 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 270
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 271 DGYGSKLMVGRFPLAIINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIVTSLKEQ 330
Query: 355 IAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ER 408
D++ DA L S + Q + L + L +Q D + ++
Sbjct: 331 --------DLIPDALENLAKSTVKRVTKPEQITLPLKENRLYYDKEQNDFFLKPQVAEQQ 382
Query: 409 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
++F+E + E +E E+ P+ +S FAE P ++DH
Sbjct: 383 LSFEESAEPGHEATDEKAEL-----PQSTSV----KFAERKPASYDQLDH 423
>gi|356538391|ref|XP_003537687.1| PREDICTED: DNA mismatch repair protein MLH3-like [Glycine max]
Length = 102
Score = 142 bits (357), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/95 (73%), Positives = 78/95 (82%), Gaps = 4/95 (4%)
Query: 1307 PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1366
PPSVLRVLN KACRGAIMFGDSLLPSEC+ IVEELK TSLCFQCAHGRP TVPLVNLEAL
Sbjct: 2 PPSVLRVLNLKACRGAIMFGDSLLPSECSFIVEELKHTSLCFQCAHGRPATVPLVNLEAL 61
Query: 1367 HKQIAQL----NNSSELWHGLHRGEISLKRASRRL 1397
H QIA+L SS+ HGL R + ++RA++RL
Sbjct: 62 HNQIAKLRLMNECSSDECHGLRRHTVRVERAAQRL 96
>gi|414075210|ref|YP_007000427.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris UC509.9]
gi|413975130|gb|AFW92594.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris UC509.9]
Length = 656
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 226/494 (45%), Gaps = 57/494 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV NS+DAG++K+ V V ++V D+
Sbjct: 1 MGKIIELNEGLANQIAAGEVVERPASVVKELVENSIDAGSSKITVSVEEAGLRLIEVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ ++ + L RH ATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRH-ATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSNA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + + KG L + K +GT + +LFYN P R KY++S ++ H +
Sbjct: 117 QEEAGTKLIAKGGTIETL--EPLAKRLGTKISVANLFYNTPARLKYIKSLQAELSH-ITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP++SF ++ E L T + ++ + +GI + E+N +D
Sbjct: 174 IINRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMREINGSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK-- 297
E++GY+S P + + + + + IN R++ ++ N L+
Sbjct: 232 ELTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGY 272
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
G R P +L+++ L D+ P K V ++ I +AI A ++
Sbjct: 273 GNRLMVGRFPFAVLSIKIDPKLADVNVHPTKQEVRLSKERELMTLISKAIDEA----LSE 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKD 417
+ LE+ + ++ S Q+ L ++PL ++D +E F+ + D
Sbjct: 329 GVLIPEALENLQGRVKEKETVSVQTELPLQNNPLYYDNVRQDFFVREEA---IFEINKND 385
Query: 418 PVE-LAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDHRVWTIESS-WFQDHQPSR 475
+ L E+N+ +QP+ S V KI R T+ESS F D P
Sbjct: 386 NSDSLTEQNSTDYTVNQPETGS-------------VSEKITDR--TVESSNEFTDRTPKN 430
Query: 476 HL--FSPPLENLKK 487
+ F +N++K
Sbjct: 431 SVSNFGVDFDNIEK 444
>gi|346226362|ref|ZP_08847504.1| DNA mismatch repair protein mutL [Anaerophaga thermohalophila DSM
12881]
Length = 623
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 184/377 (48%), Gaps = 36/377 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ VV+ELV N+VDAG++++ + V ++++D+G G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAVDAGSSEIQIIVKDAGRTLIQIIDNGCG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +D I T GFRGEALASI+ V+ +E+ T+ H +
Sbjct: 65 MSETDARMAFERHA-TSKI---RNANDLFAIRTMGFRGEALASIAAVAHVELKTRLHEQQ 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R + GSK + ++ V G+ + ++LF+N P RR++++++ ++ H V
Sbjct: 121 LGTRIEIAGSKV------ENQEPVTCAPGSNFMVKNLFFNVPARRRFLKTNATELRHIVN 174
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ RIAL +P + F +E ++ L SS+ + + G + L V A+
Sbjct: 175 E-FQRIALANPSIMF---SLEHNNQKLFILPSSNLRQRISALLGSHTNALLLPVEADTSV 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++I G+I P + QY ++N+RY+ +HK A + A +
Sbjct: 231 IKIHGFIGKPQSARKTPGDQYFFVNNRYMRSPYLHK-----AVMVAYENLVPAGH----- 280
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
CP Y L + D+ P KT + F+D V + A+R A K
Sbjct: 281 -------CPPYFLFFEADPGIIDVNIHPTKTEIKFEDERSVWKIVSAAVREALGKFNMVP 333
Query: 359 SFDVDMLEDAELPLESS 375
S D + ++P + S
Sbjct: 334 SIDFGDAGEVQIPAKKS 350
>gi|125625245|ref|YP_001033728.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|389855633|ref|YP_006357877.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris
NZ9000]
gi|166232095|sp|A2RP08.1|MUTL_LACLM RecName: Full=DNA mismatch repair protein MutL
gi|124494053|emb|CAL99053.1| DNA mismatch repair protein mutL [Lactococcus lactis subsp.
cremoris MG1363]
gi|300072055|gb|ADJ61455.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 656
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 227/494 (45%), Gaps = 57/494 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ ++ + L RH ATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRH-ATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSNA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + + KG L + K +GT + +LFYN P R KY++S ++ H +
Sbjct: 117 QEEAGTKLIAKGGTIETL--EPLAKRLGTKISVANLFYNTPARLKYIKSLQAELSH-ITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP++SF ++ E L T + ++ + +GI + E+N +D
Sbjct: 174 IINRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMREINGSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK-- 297
E++GY+S P + + + + + IN R++ ++ N L+
Sbjct: 232 ELTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGY 272
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
G R P +L+++ L D+ P K V ++ I +AI + ++
Sbjct: 273 GNRLMVGRFPFAVLSIKIDPKLADVNVHPTKQEVRLSKERELMTLISKAID----ETLSE 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKD 417
+ LE+ + + S Q+ L ++PL ++D +E F+ + D
Sbjct: 329 GVLIPEALENLQGRAKEKGTVSVQTELPLQNNPLYYDNVRQDFFVREEA---IFEINKND 385
Query: 418 PVE-LAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDHRVWTIESS-WFQDHQPSR 475
+ L E+N+ +QP+ S V KI R T+ESS F D P
Sbjct: 386 NSDSLTEQNSTDYTVNQPETGS-------------VSEKITDR--TVESSNEFTDRTPKN 430
Query: 476 HL--FSPPLENLKK 487
+ F +N++K
Sbjct: 431 SVSNFGVDFDNIEK 444
>gi|406586637|ref|ZP_11061564.1| DNA mismatch repair protein [Streptococcus sp. GMD1S]
gi|419813735|ref|ZP_14338547.1| DNA mismatch repair protein [Streptococcus sp. GMD2S]
gi|419817179|ref|ZP_14341347.1| DNA mismatch repair protein [Streptococcus sp. GMD4S]
gi|404466309|gb|EKA11653.1| DNA mismatch repair protein [Streptococcus sp. GMD4S]
gi|404472668|gb|EKA17085.1| DNA mismatch repair protein [Streptococcus sp. GMD2S]
gi|404473889|gb|EKA18213.1| DNA mismatch repair protein [Streptococcus sp. GMD1S]
Length = 649
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 200/436 (45%), Gaps = 43/436 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSQIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V + DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCAEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EI+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKD 417
+ D LE+ +R + Q+ L + L + E R T E
Sbjct: 330 -ALIPDALENLAKSTVRNRQKVEQTILPLKENTL--------YYEQTEVTRPTQVEVSDH 380
Query: 418 PVELAEENTEMEFFSQ 433
V L EE ++ F++
Sbjct: 381 QVGLTEERQDLTLFAK 396
>gi|423069765|ref|ZP_17058550.1| DNA mismatch repair protein mutL [Streptococcus intermedius F0395]
gi|355363639|gb|EHG11375.1| DNA mismatch repair protein mutL [Streptococcus intermedius F0395]
Length = 648
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 208/457 (45%), Gaps = 51/457 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAG T++ V + ++V+D+
Sbjct: 1 MSKIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGTTQIIVEIEEAGLKSIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI D + L RH ATSK+ AD+ I T GFRGEAL SI+ VS L I T +
Sbjct: 61 GEGIEHDEVSLALRRH-ATSKIKKQADL---FRIRTLGFRGEALPSIASVSRLTIETATN 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G R + +G + ++ GT + DLF+N P R KYM+S ++ H V
Sbjct: 117 GGTHGTRLIAQGGEI--ETVEPSSCPKGTKIKVEDLFFNTPARLKYMKSQQAELSHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+V+ FI + EL T + + + +G+ + E++A++
Sbjct: 174 MINRLSLAHPEVA--FILLNDGKELTRTAGTGNLRQAIAGIYGLTTAKKMIEISASNLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++ ++ L D+ P K V ++ I +AI ++ ++
Sbjct: 273 GSKLMVGRFPIAVIAIQIDPYLADVNVHPTKQEVRISKERELMVLISQAIAASLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRF----QSHQSSTHLHSSPLKNLAKQRDHMFHKEC------- 406
D++ DA L S +S Q+S L + L ++ D +
Sbjct: 330 -----DLIPDALENLAKSTINRANKSEQTSLPLKENRLYYDKERNDFFVRPQVSESNLSF 384
Query: 407 -ERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLD 442
E TF + D LA ++F ++ S LD
Sbjct: 385 EENATFDQQHTDTDMLASRAVSVKFAARQTPSYDQLD 421
>gi|116626082|ref|YP_828238.1| DNA mismatch repair protein MutL [Candidatus Solibacter usitatus
Ellin6076]
gi|122251851|sp|Q01QW7.1|MUTL_SOLUE RecName: Full=DNA mismatch repair protein MutL
gi|116229244|gb|ABJ87953.1| DNA mismatch repair protein MutL [Candidatus Solibacter usitatus
Ellin6076]
Length = 660
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 176/390 (45%), Gaps = 56/390 (14%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I LP+ V N + +G V+ VV+EL+ NS+DAGAT+V V V +++VDD
Sbjct: 1 MGRIRILPDQVANKIAAGEVVERPASVVKELLENSLDAGATEVRVEVEAGGRRLIRIVDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ RD +L ERHA TSKL D+ D I T GFRGEAL SI+ VS L + T++
Sbjct: 61 GFGMLRDDALLAFERHA-TSKL---RDVKDLLSIATLGFRGEALPSIASVSRLLLETRSM 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G R + G K L ++ GT + RDLFYN P RRK++++ P ++ H +
Sbjct: 117 EEPTGTRIEIAGGKMLR--CEEAALGGGTVITVRDLFYNVPARRKFLRTEPTELAH-IAS 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +L HP SF+ ELL +S + FG + L E+ + L
Sbjct: 174 LVTHYSLAHPDKSFRL--STGPTELLGVTPVASMKERVYQVFGSQILDELVEIGVRERDL 231
Query: 240 -----------------------------EISGYISSPYDSISVKAFQYVYINSRYVCKG 270
++G+ S P S + Y+++N R +
Sbjct: 232 FLPPPSVPPSQAIAEYRSTEPEDPPFRRFRLTGFFSRPQIQKSNRNSIYIFVNGRLIRD- 290
Query: 271 PIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTH 330
+L+ H +S A + + + A P LL L C D+ P KT
Sbjct: 291 ---RLVLHALSS--------AYHNLM-----PASAYPFALLFLECDAEEVDVNVHPSKTE 334
Query: 331 VVFKDWEPVLAFIERAIRSAWMKKIAHDSF 360
V F+ + FI +IR M+ +F
Sbjct: 335 VRFRHGSFLHDFIRDSIRERLMESRPAPTF 364
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 1147 LHLTGEF---FIP-DSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE 1202
L + GEF IP ++ S L D + L Q+ + FI L +IDQH A ERI E+
Sbjct: 448 LDMHGEFPLEAIPAPEMSLSALSDLRPLGQIHESFIIAAGRDGLWIIDQHVAHERILFEQ 507
Query: 1203 LRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICN-IHTQG--SRSFN 1259
+ + +G ++ Q L++P I LQ AEQ D+ I + +H G + F
Sbjct: 508 VLKQRAAGRVET-------QRLLMPMI----LQLSAEQQIDYARIADELHASGFETEPFG 556
Query: 1260 KNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR-VLNSKA 1318
I + A P G + L E L ++A+ + + + + R + S A
Sbjct: 557 NR---------TIAVKAAPAAVGPQDLERILFEIL-EIAENEMRTNSLDDLRRNICASIA 606
Query: 1319 CRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1358
CR AI L ++ ++ L T C HGRP +
Sbjct: 607 CRAAIKINMRLDLAKMEWLLRALAATDCPMSCPHGRPIAM 646
>gi|307711077|ref|ZP_07647499.1| DNA mismatch repair protein mutL [Streptococcus mitis SK321]
gi|307617039|gb|EFN96217.1| DNA mismatch repair protein mutL [Streptococcus mitis SK321]
Length = 649
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 204/438 (46%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAMD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I GT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEIIPATSPAGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++A + AI K +
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIS----KSLKE 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 329 QTLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|228476690|ref|ZP_04061359.1| DNA mismatch repair protein MutL [Streptococcus salivarius SK126]
gi|228251639|gb|EEK10736.1| DNA mismatch repair protein MutL [Streptococcus salivarius SK126]
Length = 647
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 178/354 (50%), Gaps = 39/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+++ + + RHA TSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 61 GEGMAQADVAMSLRRHA-TSKIKNQGDL---FRIRTLGFRGEALPSIASISYLTIVTAAA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G G + V KG K E +D VGT + +LFYN P R KYM+S ++
Sbjct: 117 GEAYGTKLVAKGGKI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQISGTGDLRQAIAGIYGLTTAKKMVEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 226 NSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD--------- 270
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G+ G + P +++++ L D+ P K V + ++A I AI
Sbjct: 271 GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|374674287|dbj|BAL52178.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
IO-1]
Length = 695
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 175/353 (49%), Gaps = 31/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
+G I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 40 VGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 99
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ ++ + L RH ATSK+ + AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 100 GLGLEKEDVALALRRH-ATSKIKYSADL---FRIRTLGFRGEALPSIASVSQMTIETSTA 155
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G + + KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 156 EEESGTKLIAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITD 212
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D
Sbjct: 213 IINRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDF 270
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK-- 297
E++GY+S P + + + + + IN R++ ++ N L+
Sbjct: 271 ELTGYVSIPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGY 311
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
G R P +L+++ +L D+ P K V ++A I +AI A
Sbjct: 312 GNRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAIDEA 364
>gi|423071705|ref|ZP_17060478.1| DNA mismatch repair protein mutL [Streptococcus intermedius F0413]
gi|355363479|gb|EHG11216.1| DNA mismatch repair protein mutL [Streptococcus intermedius F0413]
Length = 688
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 189/405 (46%), Gaps = 45/405 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 41 MSKIIELPEKLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLKSIQVIDN 100
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEAL SI+ VS L I T
Sbjct: 101 GEGIEHEEVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEALPSIASVSCLTIETATE 156
Query: 120 GRPNGYRKVMKGS--KCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G V +G +C ++ VGT + +LF+N PVR KYM+S ++ H V
Sbjct: 157 TDQYGTLLVARGGEIEC----VEPTSSTVGTKIKVENLFFNTPVRLKYMKSQQAELSHIV 212
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R++L HP+++F I+ ++ T + + + +G+ + E++A++
Sbjct: 213 -DVMNRLSLAHPEIAFTLIN--DGKKMTQTVGTGNLRQAIAGVYGLTTAKKMIEISASNL 269
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 270 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 310
Query: 298 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW---- 351
G SK P ++ ++ L D+ P K V ++ I +AI ++
Sbjct: 311 GYGSKLMVGRFPIAVIAIQIDPYLADVNVHPTKQEVRISKERELMVLISQAIAASLKEYD 370
Query: 352 -----MKKIAHDSFD-VDMLEDAELPLESSRFQSHQSSTHLHSSP 390
++ +A + + V E LPL+ +R Q T P
Sbjct: 371 LIPDALENLAKSTINRVSKPEQTSLPLKENRLYYDQGRTDFFVKP 415
>gi|418129357|ref|ZP_12766241.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA07643]
gi|353802649|gb|EHD82941.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA07643]
Length = 649
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAMD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPTRPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL EE ++ F++
Sbjct: 379 DYQVELTEERQDLTLFAK 396
>gi|435853701|ref|YP_007315020.1| DNA mismatch repair protein MutL [Halobacteroides halobius DSM
5150]
gi|433670112|gb|AGB40927.1| DNA mismatch repair protein MutL [Halobacteroides halobius DSM
5150]
Length = 611
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 176/351 (50%), Gaps = 27/351 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
MG I L + V N + +G V+ VV+ELV NS+DAG++K+ V V ++++D+
Sbjct: 1 MGQIQILSKEVANKIAAGEVVERPASVVKELVENSIDAGSSKIEVKVKNGGKDLIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ D + L +RH ATSK+ D+ + T GFRGEAL SI+ VS +E+I+K
Sbjct: 61 GVGLAEDEVKLAFQRH-ATSKISRANDL---FTLRTLGFRGEALPSIAAVSKVEMISKTE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G R + G + RK GT ++ RDLF+N PVR KY++ + ++ H +
Sbjct: 117 DSLSGTRLQIVGGEVKARESCGCRK--GTNIIVRDLFFNTPVRYKYLKQTSTEIGH-ISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L +PK+SF M ++ +++ T + + L ++ + +G + + EV+ D +
Sbjct: 174 IINRLSLAYPKISFSL--MHNDRQIVETTGNGNLLDVIFNIYGRDVAKEMIEVDYQDNYM 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+++GYIS P + S + Q ++N R++ G + K + + D +
Sbjct: 232 QLTGYISKPTITRSSRRHQSYFVNDRFIKSGLMSKAVKEAYHTLLTIDRY---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P +L L+ D+ P K F V ++ + A
Sbjct: 282 -------PIVVLKLKLNPVHVDVNIHPTKLQAKFSRGNVVYELVKDGVSKA 325
>gi|241152210|ref|XP_002406861.1| DNA mismatch repair protein mlh3, putative [Ixodes scapularis]
gi|215493958|gb|EEC03599.1| DNA mismatch repair protein mlh3, putative [Ixodes scapularis]
Length = 354
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 169/338 (50%), Gaps = 12/338 (3%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
+ LP V + +RSG + + +EE+V NS+DAGAT V V + + V+VVD+G G+
Sbjct: 3 LRALPADVISKLRSGVAIVSIAHCMEEVVLNSLDAGATCVAVRLNLPYHKVQVVDNGHGM 62
Query: 64 SRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRP 122
SR+ L + GER+ +TSK L+D++ +G+RGEA+AS+ ++S +L+I ++A G
Sbjct: 63 SREQLSVCGERY-STSKCRTLSDLEHPK---FYGYRGEAIASLVEMSGMLQIESRAAGSD 118
Query: 123 NGYRKVM-KGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ K+ +G +R VGTTV D +N PVRR + + + +
Sbjct: 119 ESHCKIFTRGHMQELSSSSSKRPSVGTTVTVLDFMFNLPVRRSSVSETID--FEFCLQLL 176
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
+AL HP+VSF D S + S S L FG + + L N I
Sbjct: 177 EGLALSHPEVSFSLRDDISGEIRFQAHKSESVLETFSQLFGKQKAASLKHATLNKKKFAI 236
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
Y+S + + + Q+ Y+N R + K IHKL +++ + ++ G
Sbjct: 237 QAYLS--MEGHTTRCLQFAYLNKRLLLKTRIHKLFHNVLKKYVL--KYQTLPGLPTSPTK 292
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV 339
P +++ ++C YD+TF+P KT V F +W+ V
Sbjct: 293 LRNKHPIFVVFVKCLTKTYDITFEPRKTLVEFANWDTV 330
>gi|227894651|ref|ZP_04012456.1| DNA mismatch repair protein [Lactobacillus ultunensis DSM 16047]
gi|227863546|gb|EEJ70967.1| DNA mismatch repair protein [Lactobacillus ultunensis DSM 16047]
Length = 636
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 183/373 (49%), Gaps = 51/373 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MPKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRIDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI+RD + L RHA TSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRHA-TSKISNEHDL---FKVATLGFRGEALASISAVSHVEILTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G G R G G +D GT + RDLF+N P R KY++ SP+ + +
Sbjct: 115 TEG-AIGVRATFSGGNK--KGQEDAAARKGTKITVRDLFFNTPARLKYLR-SPRTEIMKI 170
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSF-------GIEDFSFLD 230
+ R+AL +P+VSF + + ++L + + L +++ G+E+FS
Sbjct: 171 VDIINRLALGYPQVSFT---LSNTGKILLRTTGNGNLKQTVANVYGRHIAEGMENFS--- 224
Query: 231 EVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWK 290
D ++SG +S P + S + F + +N RY+ +++
Sbjct: 225 ---TKDNDFKVSGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQ 262
Query: 291 ANNGFLKGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
N + G SK A P +++++ L D+ P K V + + I AI
Sbjct: 263 LNTAIMDGYGSKLTARHYPIVVVSIKVDPLLVDVNVHPTKQEVRLSKEKELSRLITTAIS 322
Query: 349 SAWMKKIAH-DSF 360
+A ++K+ D+F
Sbjct: 323 NALVEKVEQTDAF 335
>gi|154250378|ref|YP_001411203.1| DNA mismatch repair protein MutL [Fervidobacterium nodosum Rt17-B1]
gi|226723039|sp|A7HNR3.1|MUTL_FERNB RecName: Full=DNA mismatch repair protein MutL
gi|154154314|gb|ABS61546.1| DNA mismatch repair protein MutL [Fervidobacterium nodosum Rt17-B1]
Length = 588
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 185/359 (51%), Gaps = 41/359 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I +LP+ V + + +G V+ + VV+ELV NS+DA AT + V + Y+KV D+
Sbjct: 1 MSVIKKLPQEVVSKIAAGEVVINPASVVKELVENSLDANATSIEVQIRNGGKSYIKVSDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+SRD +++ +R TSK+ L +D I ++GFRGEAL+SI++VS L IIT +
Sbjct: 61 GIGMSRDDMLIAIDRF-TTSKISAL---EDIYNIHSYGFRGEALSSIAEVSRL-IITSSD 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G N +R + G K + I + ++ GTTV DLF+N P RRK++ SS K V +
Sbjct: 116 GN-NAHRLEVIGGKI--IKITETHRERGTTVEVYDLFFNIPARRKFL-SSEKVETRMVTE 171
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGI-----EDFSFLDEVNA 234
V + LV P VSF F + EDE++ S S L F I ++FS ++ + +
Sbjct: 172 IVEKFMLVQPSVSFVF---KIEDEIVYNASKGS----LEDRFSIIFPEVKEFSLIEPLQS 224
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
++ISG ISSP + ++ Q ++N R+V I LLN SF+ G
Sbjct: 225 E--IMQISGIISSPQYTRRNRSGQIFFVNKRFV----IDNLLN---LSFE--------RG 267
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ G+ P ++ L D+ P K V F D + V I R IR+ K
Sbjct: 268 Y--GEALAQGEHPYGVIFLDFLPDKIDVNIHPQKLQVKFSDPQNVYNEIARTIRTTLRK 324
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L +ID HAA ERI E+L+ + ++V L + L + QL Q ++ K +G
Sbjct: 423 LVIIDFHAAHERIIYEQLKE----NKFETVQLL-IPLHIKLGKSFLQLSQQLTDEFKKYG 477
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV-NLSDVDLLEFLQQLADTDGSS 1304
+ I T L+ + + +P I V + S+V FL+ L +
Sbjct: 478 FDFEIKT------------LEDGSGEVVIKQIPSILKVTDASNV----FLEVLEEYRIPF 521
Query: 1305 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1360
P + VL SKAC+ A+ GD L E I++E+K +L C HGRP + L
Sbjct: 522 EKPKGLTYVLASKACKSAVKTGDKLSHDEVQQIIKEIKSKNLL-TCPHGRPIMMKL 576
>gi|358465302|ref|ZP_09175252.1| DNA mismatch repair protein [Streptococcus sp. oral taxon 058 str.
F0407]
gi|357065797|gb|EHI75972.1| DNA mismatch repair protein [Streptococcus sp. oral taxon 058 str.
F0407]
Length = 649
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 205/438 (46%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAMD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGQV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF + E+ T + + +G+ + + +D
Sbjct: 174 IVNRLGLAHPEISFSLVS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIAIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ +R + Q++ PLK + +++++ E R + E
Sbjct: 330 -TLIPDALENLAKSTVRNRQKVEQTTL-----PLKE-----NTLYYEQTEPPRPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL+EE ++ F++
Sbjct: 379 DHQVELSEEGQDLTLFAK 396
>gi|110636441|ref|YP_676648.1| DNA mismatch repair protein [Cytophaga hutchinsonii ATCC 33406]
gi|122967050|sp|Q11Z58.1|MUTL_CYTH3 RecName: Full=DNA mismatch repair protein MutL
gi|110279122|gb|ABG57308.1| DNA mismatch repair protein MutL [Cytophaga hutchinsonii ATCC
33406]
Length = 610
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 181/363 (49%), Gaps = 32/363 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ + N + +G V+ VV+EL+ NSVDAG+T + + V ++V+D+G G
Sbjct: 5 IRLLPDNIANQIAAGEVVQRPASVVKELLENSVDAGSTNIQLIVKDAGKQLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK + DD I TFGFRGEA+ASI+ V+ +E+ TK G
Sbjct: 65 MSDGDARLCFERH-ATSK---IRSADDLFAIRTFGFRGEAMASIASVAQVEMKTKLPGNE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++GS L + GT++ ++LFYN P RR +++S+ ++ H + + V
Sbjct: 121 LGTLIRIEGSAILVH--EQTAHPQGTSISVKNLFYNVPARRNFLKSNSVEMRHIMDEFV- 177
Query: 183 RIALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
R+AL HP+V+F F D+E + T S + ++LL S+ + +E + +
Sbjct: 178 RVALAHPEVAFSFYHNDLELFNVPEETLSKRA-VSLLGGSYREQLIPCKEETD----FVS 232
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
ISGYI P + + QY ++N+RY+ +H + H +D++
Sbjct: 233 ISGYIGKPESARKTRGDQYFFVNNRYIRSNYLHHAVMHAFEELIPTDAF----------- 281
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 360
P YLL + + D+ P KT + F D + V A I+ ++ + S
Sbjct: 282 ------PFYLLFIEIDPAHIDVNVHPTKTEIKFDDEKTVYAIIKACVKRSLGTHNIMPSL 335
Query: 361 DVD 363
D D
Sbjct: 336 DFD 338
>gi|300712236|ref|YP_003738050.1| DNA mismatch repair protein MutL [Halalkalicoccus jeotgali B3]
gi|448295930|ref|ZP_21485991.1| DNA mismatch repair protein MutL [Halalkalicoccus jeotgali B3]
gi|299125919|gb|ADJ16258.1| DNA mismatch repair protein MutL [Halalkalicoccus jeotgali B3]
gi|445582653|gb|ELY36993.1| DNA mismatch repair protein MutL [Halalkalicoccus jeotgali B3]
Length = 649
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 161/348 (46%), Gaps = 29/348 (8%)
Query: 8 PEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRD 66
PE V + + +G V+ VV+ELV NS+DAGAT + V VG ++V DDG G++
Sbjct: 13 PETV-DKIAAGEVVERPASVVKELVENSLDAGATGITVAVGSGGRDRIRVADDGVGMNEG 71
Query: 67 GLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYR 126
+ E+H TSKL +AD++ G+ T GFRGEAL +I VS L I TK G G +
Sbjct: 72 SVRKAVEQHT-TSKLRDVADLE--RGVSTLGFRGEALYTIGAVSRLAITTKPRGSETGTK 128
Query: 127 KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIAL 186
V+ G + ++ GT V DLFYN P R+KY++ + H V V R AL
Sbjct: 129 LVLAGGEVES--VEPAGCPEGTAVEVTDLFYNTPARKKYLKREATEFDH-VNTVVTRYAL 185
Query: 187 VHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA-NDGALE-ISGY 244
+P V F E+ T A ++S +G E + + G LE +SGY
Sbjct: 186 ANPGVRFAL--EHDGREVFSTTGQGDLQATVLSVYGREVARAMVPIEGLAAGPLEGLSGY 243
Query: 245 ISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQ 304
+S P + S A+ Y+N RYV PI + + D +
Sbjct: 244 VSDPETTRSSPAYVSTYVNGRYVRSKPIRSAVVGAYGTQLAPDRY--------------- 288
Query: 305 ACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
P +L+L D+ P K V F D E + A IE+ +R +
Sbjct: 289 --PFAVLDLDVSPGTVDVNVHPRKMEVRFGDGEAIEAQIEKTVRETLL 334
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 83/207 (40%), Gaps = 21/207 (10%)
Query: 1153 FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEG 1212
F PD N L D +VL Q+ ++ A L V+DQHAADER+ E LR + L+GE
Sbjct: 439 FGEPDEPNYERLPDLRVLGQIQDTYVLCAAPKGLLVVDQHAADERVHYERLRAE-LAGET 497
Query: 1213 KSVAYLDAEQELVLPEIGYQLLQNFAEQIKD-WGWICNIHTQGSRSFNKNLNLLQRQITV 1271
+ Q LV P + +L AE G + + +R
Sbjct: 498 TT-------QTLVEP-VELELTAREAELFDAHEGALARVGFAATREGR-----------T 538
Query: 1272 ITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLP 1331
+ + AVP F LS L + L D T +V +L AC A+ SL
Sbjct: 539 VRIGAVPAAFDATLSPELLRDALSACLSGDPGETVEATVDELLGDLACYPAVTGNTSLRE 598
Query: 1332 SECALIVEELKQTSLCFQCAHGRPTTV 1358
++ L + C HGRPT +
Sbjct: 599 GSVVDLLGALDGCENPYACPHGRPTVI 625
>gi|431796161|ref|YP_007223065.1| DNA mismatch repair protein MutL [Echinicola vietnamensis DSM
17526]
gi|430786926|gb|AGA77055.1| DNA mismatch repair protein MutL [Echinicola vietnamensis DSM
17526]
Length = 623
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 176/353 (49%), Gaps = 38/353 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+A+ N + +G V+ + ++EL+ N+VDAGAT + V V ++V+D+G G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPSSALKELLENAVDAGATDIQVLVKEAGKMLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ +D I TFGFRGEA+ASI+ V+ +E+ T+A G
Sbjct: 65 MSITDARMCFERHA-TSKI---RSSEDLFAIRTFGFRGEAMASIAAVAQVELKTRAKGEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G ++GS+ + + V GT++ ++LF+N P RR +++S+P ++ H V++
Sbjct: 121 LGTLICIEGSE-----VKKQEPVVCPEGTSIAVKNLFFNVPARRNFLKSNPVEMKHIVEE 175
Query: 180 CVLRIALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
R+AL +P VSF I DME L S ++ FG S L
Sbjct: 176 -FQRVALANPAVSFSLIHNDME-----LFKLSPGKLSQRIVGIFGKNYQSQLVSCEEETP 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ I GY+ P ++ + QY ++N+RY+ LNH + N F +
Sbjct: 230 HVSIKGYVGKPENAKKSRGEQYFFVNNRYIKSN----YLNHAVS-----------NAF-E 273
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
G S Q P Y+L L S D+ P KT + F D + + + ++ A
Sbjct: 274 GLMSPDQH-PFYVLFLELDPSHIDINVHPTKTEIKFDDERTIYSVVRAGVKQA 325
>gi|424788681|ref|ZP_18215431.1| DNA mismatch repair MutL family protein [Streptococcus intermedius
BA1]
gi|422112461|gb|EKU16248.1| DNA mismatch repair MutL family protein [Streptococcus intermedius
BA1]
Length = 648
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 189/405 (46%), Gaps = 45/405 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 1 MSKIIELPEKLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLKSIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEAL SI+ VS L I T
Sbjct: 61 GEGIEHEEVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEALPSIASVSCLTIETATE 116
Query: 120 GRPNGYRKVMKGS--KCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G V +G +C ++ VGT + +LF+N PVR KYM+S ++ H V
Sbjct: 117 TDQYGTLLVARGGEIEC----VEPTSSTVGTKIKVENLFFNTPVRLKYMKSQQAELSHIV 172
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R++L HP+++F I+ ++ T + + + +G+ + E++A++
Sbjct: 173 -DVMNRLSLAHPEIAFTLIN--DGKKMTQTVGTGNLRQAIAGVYGLTTAKKMIEISASNL 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 298 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW---- 351
G SK P ++ ++ L D+ P K V ++ I +AI ++
Sbjct: 271 GYGSKLMVGRFPIAVIAIQIDPYLADVNVHPTKQEVRISKERELMVLISQAIAASLKEYD 330
Query: 352 -----MKKIAHDSFD-VDMLEDAELPLESSRFQSHQSSTHLHSSP 390
++ +A + + V E LPL+ +R Q T P
Sbjct: 331 LIPDALENLAKSTINRVSKPEQTSLPLKENRLYYDQGRTDFFVKP 375
>gi|418977428|ref|ZP_13525246.1| DNA mismatch repair protein [Streptococcus mitis SK575]
gi|383349869|gb|EID27786.1| DNA mismatch repair protein [Streptococcus mitis SK575]
Length = 649
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPTRPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|419494520|ref|ZP_14034240.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47461]
gi|421302041|ref|ZP_15752706.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA17484]
gi|379596884|gb|EHZ61687.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47461]
gi|395902855|gb|EJH13787.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA17484]
Length = 649
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 207/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|229086317|ref|ZP_04218495.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-44]
gi|228697012|gb|EEL49819.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-44]
Length = 645
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 190/402 (47%), Gaps = 42/402 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G V+KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLVIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L + + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIRGYVTLPEVTRASRNYMSTIVNGRYVRNYVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
R P L++ L D+ P K V F + +L IE+ ++ A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLQLIEKTLQDAFKK------ 327
Query: 360 FDVDMLEDAELPL------ESSRFQSHQSSTHLHSSPLKNLA 395
+ ++ DA + ES + Q H T SP+ N+
Sbjct: 328 --IQLIPDAGVTTKKKEKDESVQEQFHFEHTKPKESPMPNIV 367
>gi|409195556|ref|ZP_11224219.1| putative DNA mismatch repair protein [Marinilabilia salmonicolor
JCM 21150]
Length = 625
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 182/373 (48%), Gaps = 36/373 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ +++ELV N+VDAG++++ + V V+++D+G G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASIIKELVENAVDAGSSEIKIIVKDAGRTLVQIIDNGCG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +D I T GFRGEALASI+ V+ +E+ T+ H +
Sbjct: 65 MSETDARMAFERHA-TSKI---REANDLFAIRTMGFRGEALASIAAVAQVELKTRPHEQE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R ++ GS+ + ++ V G+ + ++LF+N P RR++++++ ++ H V
Sbjct: 121 LGTRILISGSQV------EIQEPVTCSPGSNFMIKNLFFNVPARRRFLKTTATEMRHIVN 174
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ RIAL +P V+F E +LL + L + G + + + V
Sbjct: 175 E-FQRIALANPDVAFSLTHNE---QLLFRLPAGKLLQRINDVMGKQSSAQMIPVETETSL 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ I G+I P + Q+ ++N+R++ +HK + +
Sbjct: 231 VNIYGFIGKPQIARKTMGDQFFFVNNRFMKSPYLHKAVTVAYENL--------------- 275
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
+++ CP Y L SL D+ P KT + F+D V + A+R + K
Sbjct: 276 --VQAEHCPPYFLFFETDPSLIDVNIHPTKTEIKFEDERSVWKIVSAAVRESLGKFNMVP 333
Query: 359 SFDVDMLEDAELP 371
S D D ++ +P
Sbjct: 334 SIDFDQTDEISIP 346
>gi|365122672|ref|ZP_09339572.1| DNA mismatch repair protein MutL [Tannerella sp. 6_1_58FAA_CT1]
gi|363642178|gb|EHL81545.1| DNA mismatch repair protein MutL [Tannerella sp. 6_1_58FAA_CT1]
Length = 629
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 184/376 (48%), Gaps = 38/376 (10%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
I LP++V N + +G V+ VV+ELV N++DAGAT + + V ++V+D+G
Sbjct: 4 VIQLLPDSVANQIAAGEVIQRPASVVKELVENAIDAGATLIQIIVKDAGRTLIQVIDNGK 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+S L ERH ATSK+ D+ + T GFRGEALASI+ ++ +E+ T+
Sbjct: 64 GMSETDARLSFERH-ATSKIRQAGDL---FSLHTMGFRGEALASIAAIAQVELRTRRIED 119
Query: 122 PNGY-----RKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G V++ +C+ VG+ +++FYN P RRK+++S+ + L +
Sbjct: 120 EVGTAIALAASVVESQECVSC-------PVGSNFAVKNIFYNVPARRKFLKSNQVE-LSN 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ RIAL++P+++F+ + ++E L +S+ +IS FG L V
Sbjct: 172 ILSEFERIALINPEIAFELVHNDNE---LFNLPASNFRQRIISLFGKGMNQQLLTVEVET 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++ISGYI P S A QY ++N RY+ HK + S++
Sbjct: 229 SLVKISGYIGKPEASRKRNALQYFFVNGRYMRHPYFHKAVMQ---SYE------------ 273
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
+ P Y +NL + D+ P KT + F++ +P+ + A++ A K A
Sbjct: 274 --QLIPVGEMPNYFINLTVDPASIDVNIHPTKTEIKFENEQPIWQILSAAVKEALGKFSA 331
Query: 357 HDSFDVDMLEDAELPL 372
S D DM E+P+
Sbjct: 332 VPSIDFDMEGAPEIPV 347
>gi|152976134|ref|YP_001375651.1| DNA mismatch repair protein [Bacillus cytotoxicus NVH 391-98]
gi|189030390|sp|A7GR98.1|MUTL_BACCN RecName: Full=DNA mismatch repair protein MutL
gi|152024886|gb|ABS22656.1| DNA mismatch repair protein MutL [Bacillus cytotoxicus NVH 391-98]
Length = 649
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 174/354 (49%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L E + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDEQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERH ATSK + D +D I T GFRGEAL SI+ VS LE++T
Sbjct: 61 GDGIAEEDCIVAFERH-ATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELVTSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGEIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K + +LL T + +L + + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNTKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIRGYVTLPEVTRASRNYMSTIVNGRYVRNYVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L FIE+ ++ A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLQFIEQTLQDAFKK 327
>gi|197122538|ref|YP_002134489.1| DNA mismatch repair protein [Anaeromyxobacter sp. K]
gi|229890120|sp|B4UCW3.1|MUTL_ANASK RecName: Full=DNA mismatch repair protein MutL
gi|196172387|gb|ACG73360.1| DNA mismatch repair protein MutL [Anaeromyxobacter sp. K]
Length = 607
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 173/362 (47%), Gaps = 38/362 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I+ LP + N + +G V+ +V+ELV N++DAGAT V V V V+V DD
Sbjct: 1 MPRIHVLPPGLVNQIAAGEVVERPASIVKELVENALDAGATSVGVDVEEGGLALVRVADD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSG+ RD +L ERHA TSKL D + IGT GFRGEA+ +I+ VS + T A
Sbjct: 61 GSGMDRDDALLALERHA-TSKL---RDAEGLAAIGTMGFRGEAVPAIASVSRFRLDTSAG 116
Query: 120 GRPNGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R ++G LG + + GTTV RDLF+N P RRK+M+++ + H V
Sbjct: 117 EDGAGTRVEIEGG---VLGEVAPVARPRGTTVEVRDLFFNTPARRKFMRAASTEAGH-VS 172
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDG 237
+ V+R+AL P V F + S L+ + LA + G E L V+A G
Sbjct: 173 EAVIRLALARPDVGFT---LRSGGRLVLGARAGGGLADRAGQALGREAHRHLLPVDARRG 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVC-KGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ + G I SP S + Y+++N RYV + H +L A +
Sbjct: 230 EVRVHGLICSPDHSEATGRALYLFVNGRYVRDRAAAHAVLRAFAGTLPPGRH-------- 281
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-W 351
PA +L + P D+ P K V F + ++ + + A+R+A W
Sbjct: 282 ----------PAGVLFVELPLHRVDVNVHPQKLEVRFAEGREVFDALFHTVAGALRTAPW 331
Query: 352 MK 353
++
Sbjct: 332 LR 333
>gi|414157709|ref|ZP_11414005.1| DNA mismatch repair protein mutL [Streptococcus sp. F0441]
gi|410871627|gb|EKS19574.1| DNA mismatch repair protein mutL [Streptococcus sp. F0441]
Length = 649
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 168/350 (48%), Gaps = 31/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSILTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
SK P ++++ L D+ P K V ++A + AI
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAI 322
>gi|15674190|ref|NP_268365.1| DNA mismatch repair protein [Lactococcus lactis subsp. lactis
Il1403]
gi|12725273|gb|AAK06306.1|AE006449_12 DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
Il1403]
Length = 695
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 174/353 (49%), Gaps = 31/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
+G I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 40 VGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 99
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ ++ + L RH ATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 100 GLGLEKEDVALALRRH-ATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSTA 155
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G + V KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 156 EEESGTKLVAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITD 212
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D
Sbjct: 213 IINRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDF 270
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK-- 297
E++GY+S P + + + + + IN R++ ++ N L+
Sbjct: 271 ELTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGY 311
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
G R P +L+++ +L D+ P K V ++A I +AI A
Sbjct: 312 GNRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAIDEA 364
>gi|228909592|ref|ZP_04073415.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 200]
gi|228849881|gb|EEM94712.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 200]
Length = 647
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 174/354 (49%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I+GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TITGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|323350706|ref|ZP_08086367.1| DNA mismatch repair protein HexB [Streptococcus sanguinis VMC66]
gi|322123126|gb|EFX94817.1| DNA mismatch repair protein HexB [Streptococcus sanguinis VMC66]
Length = 672
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 215/470 (45%), Gaps = 61/470 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 26 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKTIQVTDN 85
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 86 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 141
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 142 AGQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 196
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 197 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 253
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 254 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 294
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 295 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ 354
Query: 355 IAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ER 408
D++ DA L S + Q+S L + L +Q D + ++
Sbjct: 355 --------DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQ 406
Query: 409 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
++F+E + E E E P+ +S FAE P+ ++DH
Sbjct: 407 LSFEESAEPIHEATNEKAE------PQPTSV----KFAERKPVSYDQLDH 446
>gi|363749433|ref|XP_003644934.1| hypothetical protein Ecym_2384 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888567|gb|AET38117.1| Hypothetical protein Ecym_2384 [Eremothecium cymbalariae
DBVPG#7215]
Length = 746
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 178/351 (50%), Gaps = 34/351 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
MG + +L + V ++S + + V ELV NSVD+G V VYV V V V DDG
Sbjct: 1 MGKLEKLQDDVLQLLQSQISIVSIGSAVRELVQNSVDSGCANVEVYVDVGRWKVVVKDDG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH- 119
GIS + L ++G+++ TSKL +L ++ GI TFGFRGE + ++S++S + ++++ H
Sbjct: 61 HGISPEDLNMVGQKN-FTSKLRNLESLE---GIRTFGFRGEGIFTLSNISKVTVVSRYHE 116
Query: 120 -----GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPK-KV 173
R R VM G K + + GTTVV DLFYN PVRRK + P KV
Sbjct: 117 YNSIWMRALPSRAVMVGPKDAEKLMYAVKNSTGTTVVLTDLFYNLPVRRKMITKEPMYKV 176
Query: 174 LHSVKKCVLRIALVHP--KVSFKFIDMESEDELLCTCSSSSPLAL---LISSF------- 221
+K+ +L++ + P VS FID ++C+ + S + L L S F
Sbjct: 177 YDEIKRYILQVLICLPVLNVSVVFIDGSQRKTIICSKNISKTVQLSKSLTSIFQNTFGAI 236
Query: 222 -GIEDFSFLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL- 279
G E+F + V+A + G IS + + +Q++YIN + + +LN +
Sbjct: 237 CGPENFKY---VSARYQDFIVDGIISVI--PVPTRDYQFIYINKQSYEDKSFYVMLNKIF 291
Query: 280 -AASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKT 329
+A+F SD++ ++ +K + P +L+ CP+S+ DL P K
Sbjct: 292 RSANFGTSDAYISD---VKSVGQPYSSYPVFLIKCACPNSVSDLMQHPAKV 339
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 113/234 (48%), Gaps = 27/234 (11%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGT-------LAVIDQHAADERIRLEE-LRHKVLSG 1210
I KS L+D V+ QVDKKFI + + L ++DQHAADERI+LE +R +++
Sbjct: 497 IKKSQLKDCIVINQVDKKFILLKLQPSKFNKNPLLLILDQHAADERIKLETYIRDYLINI 556
Query: 1211 EGKSVAYLDAEQELVLPEIGYQ--LLQNFAEQIKDWGWICNIHTQGSRS-----FNKNLN 1263
G + + +P + L +++ ++ WG+ I S F L
Sbjct: 557 LGPFPLDQNVNCSIKIPVTSTEAELFKSYKDEFSFWGFNFTIEETTGESIMLITFVPRLV 616
Query: 1264 LLQRQITVITLLAVPCIFGVNL------------SDVDLLEFLQQLADTDGSSTTPPSVL 1311
+ + L V G +L S V E L L + P ++
Sbjct: 617 DARAKNCATYLKKVLLQHGYDLKSHKKIRASSLKSTVLPNEMLDNLQWWKYINAMPRLLI 676
Query: 1312 RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEA 1365
+ NSKACR A+MFGD+L EC L++ EL + ++ FQCAHGRP+ VP+V ++A
Sbjct: 677 EIFNSKACRSAVMFGDTLTHEECVLLINELSKCNIPFQCAHGRPSIVPIVEMQA 730
>gi|75760973|ref|ZP_00740979.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228902271|ref|ZP_04066431.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 4222]
gi|434376826|ref|YP_006611470.1| DNA mismatch repair protein [Bacillus thuringiensis HD-789]
gi|74491537|gb|EAO54747.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228857386|gb|EEN01886.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 4222]
gi|401875383|gb|AFQ27550.1| DNA mismatch repair protein [Bacillus thuringiensis HD-789]
Length = 654
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 174/354 (49%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I+GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TITGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|334366421|ref|ZP_08515353.1| DNA mismatch repair protein, C-terminal domain protein [Alistipes
sp. HGB5]
gi|313157387|gb|EFR56810.1| DNA mismatch repair protein, C-terminal domain protein [Alistipes
sp. HGB5]
Length = 679
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 173/370 (46%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LPE V N + +G V+ VV+E++ N++DAGA V V + +++VDDG G
Sbjct: 5 IRLLPEVVANQIAAGEVVNRPASVVKEMMENAIDAGARTVKVNFRDGGKDLIQIVDDGCG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + +RHA TSK+ +DD + TFGFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSPIDARMAFDRHA-TSKI---TSVDDIYALNTFGFRGEALASIAAVAQVELRTRQEGDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + + G + + G VG+ R+LFYN P RR+++ S +K
Sbjct: 121 VGTQTEINGGQ--FAGQTPVMCPVGSQFFVRNLFYNVPARRRFLDKSTTSAAQ-IKSEFQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL +P+++F ++ + D + T ++S ++ G L EV A+ I
Sbjct: 178 RVALCNPQIAF---ELYANDAPVYTLGAASLAGRIVDVVGRHIKQNLLEVEADTSIARIE 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GYI P + QY+++N RY +S+ S KA +
Sbjct: 235 GYIGRPAAAKRRNGEQYLFVNGRY------------FKSSYLTSAIMKAYEKLI-----P 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
+ P+Y L L S D+ P KT V F D E V + A+R K A D
Sbjct: 278 ESSSPSYFLYLTIDPSRIDVNVHPQKTEVKFADEEAVWQIVNAAVRETLAKTGAVPLMDF 337
Query: 363 DMLEDAELPL 372
D E+P+
Sbjct: 338 DREGIVEIPV 347
>gi|422853252|ref|ZP_16899916.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK160]
gi|325697264|gb|EGD39150.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK160]
Length = 672
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 215/470 (45%), Gaps = 61/470 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 26 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 85
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 86 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 141
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 142 AGQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 196
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 197 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 253
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 254 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 294
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 295 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ 354
Query: 355 IAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ER 408
D++ DA L S + Q+S L + L +Q D + ++
Sbjct: 355 --------DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQ 406
Query: 409 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
++F+E + E E E P+ +S FAE P+ ++DH
Sbjct: 407 LSFEESAEPIHEATNEKAE------PQPTSV----KFAERKPVSYDQLDH 446
>gi|206900128|ref|YP_002250800.1| DNA mismatch repair protein MutL [Dictyoglomus thermophilum H-6-12]
gi|238058931|sp|B5YE42.1|MUTL_DICT6 RecName: Full=DNA mismatch repair protein MutL
gi|206739231|gb|ACI18289.1| DNA mismatch repair protein MutL [Dictyoglomus thermophilum H-6-12]
Length = 575
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 171/358 (47%), Gaps = 42/358 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDD 59
MG + LPE +RN + +G V+ VV+ELV NS+DAGAT++ V + + V+DD
Sbjct: 1 MGKVVLLPEELRNKIAAGEVVERPVSVVKELVENSIDAGATRIIVEFANGGETLISVIDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++R+ +L R ATSK + +D I T GFRGEALASI+ VS +E+ +K
Sbjct: 61 GEGMTREDAILALNRF-ATSK---IKTEEDLYNIKTLGFRGEALASIASVSKMELRSKTE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ KV G + ++ + GT + DLFYN P R+K+++S + + +
Sbjct: 117 LEDGVFIKVEGG---VIKEVNLWQGSKGTVIKVSDLFYNVPARKKFLKSKATET-NLIID 172
Query: 180 CVLRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
V RIA+ +P++SF+ I D +S+ T L+ F I L +G
Sbjct: 173 FVKRIAIAYPQISFQLIQDGKSK---FITPGDGDLENLISLLFDIRVQESLISFQKREGD 229
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
I G++S P I++K+ Y Y+N R W NN L+
Sbjct: 230 YCIEGFVSKPGKLIALKSQDYFYVNRR-----------------------WVRNNTILQA 266
Query: 299 KRSKSQA------CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
R + P ++ L P+S D+ P K V F+ + V F+ R+IR A
Sbjct: 267 IREGYKGRILDGYFPFSIIFLTVPYSEVDVNVHPTKREVKFQKEKEVYEFVFRSIREA 324
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 30/194 (15%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL------DAE 1221
+++ Q+ +I + + +IDQHAA ERI+ EEL+ ++ G ++V L +E
Sbjct: 389 RIVGQIFDNYIILETKDKVYIIDQHAAHERIKYEELKEELNLGYIQNVEILFPVVIEVSE 448
Query: 1222 QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF 1281
+E +L + LL+ FA +D+G H + + + LN + ++ +F
Sbjct: 449 EEKILLDKYKDLLERFAFSWEDFG---PYHIRIVKVPYEFLNFDSK--------SIENLF 497
Query: 1282 GVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEEL 1341
+SD+ + L +L D +++ S AC A+ G+ L+ E ++++ +
Sbjct: 498 REIISDISEKD-LSKLED------------KIIKSMACHSAVRSGNILIREEMEMLIKLI 544
Query: 1342 KQTSLCFQCAHGRP 1355
+ ++ C HGRP
Sbjct: 545 FEKNIPLTCPHGRP 558
>gi|442804337|ref|YP_007372486.1| DNA mismatch repair protein MutL [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740187|gb|AGC67876.1| DNA mismatch repair protein MutL [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 656
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 171/354 (48%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
MG + L E N + +G V+ VV+E+V N++DA AT + V + GV + +K+V
Sbjct: 1 MGKVVILDENTANQIAAGEVIERPASVVKEMVENAIDAHATSITVEITNGGVKS--IKIV 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI D + L ERHA TSK+ +DD T + T GFRGEALASI+ VS +E+ITK
Sbjct: 59 DNGDGIEGDDVELAFERHA-TSKI---RSIDDLTRLSTMGFRGEALASIAAVSKVEVITK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G R +++G K + K GTT + R+LFYN P R K+++ + + +
Sbjct: 115 TEDAKTGTRVIVEGGKVVLSEPTGAPK--GTTFIVRELFYNTPARYKFLKKDTTEATY-I 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ +IAL P +S KF++ ++ T + L+ + S FG + + VN
Sbjct: 172 HDVISKIALARPDISIKFVNQGK--TVIHTPGNHDLLSTVYSLFGKDTARAVIPVNLTFN 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+++SG++ P S + + V++N R V I + +++K
Sbjct: 230 GVKVSGFVGKPEISRGNRNLEMVFVNGRVVYNRTIITAIE---------EAYKT------ 274
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
R + P +L + P D+ P K V F D V + A+ A
Sbjct: 275 --RLMQKRFPFTVLKVDVPPETVDVNVHPAKLEVRFSDENMVYRTVYMAVSDAL 326
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 26/205 (12%)
Query: 1160 NKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLD 1219
++ L +A+++ Q +I + G + VIDQHAA ERIR E LR + E S L
Sbjct: 461 DRERLLNARIIGQAFDSYIILEEGEDVFVIDQHAAHERIRFETLREWFVHEEAFSQGLLS 520
Query: 1220 AEQELVLPEIGYQLLQNFAE---QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
V+ E+ Q + F E I+ G+ + G+R+ + + A
Sbjct: 521 P----VMVELTQQEMHEFTELEPYIRKLGFEAEVF--GNRT--------------VLVRA 560
Query: 1277 VPCIFGVNLSDVDLLEFLQQLA-DTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1335
+P + SD D + L +L+ +T G P + AC+ AI + E
Sbjct: 561 IPYLLTEGFSDRDFRDILGKLSEETRGVLEIIPE--ETIYMMACKSAIKANRPMSEMEIQ 618
Query: 1336 LIVEELKQTSLCFQCAHGRPTTVPL 1360
+V EL + + C HGRP + +
Sbjct: 619 SLVRELVKCENPYTCVHGRPVIISI 643
>gi|390945647|ref|YP_006409407.1| DNA mismatch repair protein MutL [Alistipes finegoldii DSM 17242]
gi|390422216|gb|AFL76722.1| DNA mismatch repair protein MutL [Alistipes finegoldii DSM 17242]
Length = 679
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 173/370 (46%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LPE V N + +G V+ VV+E++ N++DAGA V V + +++VDDG G
Sbjct: 5 IRLLPEVVANQIAAGEVVNRPASVVKEMMENAIDAGARTVKVNFRDGGKDLIQIVDDGCG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + +RHA TSK+ +DD + TFGFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSPIDARMAFDRHA-TSKI---TSVDDIYALNTFGFRGEALASIAAVAQVELRTRQEGDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + + G + + G VG+ R+LFYN P RR+++ S +K
Sbjct: 121 VGTQTEINGGQ--FAGQTPVMCPVGSQFFVRNLFYNVPARRRFLDKSTTSAAQ-IKSEFQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL +P+++F ++ + D + T ++S ++ G L EV A+ I
Sbjct: 178 RVALCNPQIAF---ELYANDASVYTLGAASLAGRIVDVVGRHIKQNLLEVEADTSIARIE 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GYI P + QY+++N RY +S+ S KA +
Sbjct: 235 GYIGRPAAAKRRNGEQYLFVNGRY------------FKSSYLTSAIMKAYEKLI-----P 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
+ P+Y L L S D+ P KT V F D E V + A+R K A D
Sbjct: 278 ESSSPSYFLYLTIDPSRIDVNVHPQKTEVKFADEEAVWQIVNAAVRETLAKTGAVPLMDF 337
Query: 363 DMLEDAELPL 372
D E+P+
Sbjct: 338 DREGIVEIPV 347
>gi|357237177|ref|ZP_09124520.1| DNA mismatch repair protein [Streptococcus criceti HS-6]
gi|356885159|gb|EHI75359.1| DNA mismatch repair protein [Streptococcus criceti HS-6]
Length = 648
Score = 140 bits (354), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 169/350 (48%), Gaps = 31/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ + VV+ELV N++DAG+T++ V + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVVERPSSVVKELVENAIDAGSTQITVEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI D +VL RH ATSK+ + AD+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIENDDVVLSLRRH-ATSKIKNQADL---FRIRTLGFRGEALPSIASISDLTVKTAVK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G V KG + + + VGT + DLF+N P R KYM+S ++ H V
Sbjct: 117 GAEYGTLLVAKGGEI--ISQEPVSTPVGTKITVEDLFFNTPARLKYMKSLQAELGHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R +L HP+++F I+ EL T + + +G+ + E++A+D
Sbjct: 174 VINRQSLGHPEIAFTLIN--DGRELTKTAGTGDLRQTIAGIYGLNTAKKMVEISASDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
SK P +++++ L D+ P K V + ++ I AI
Sbjct: 273 GSKLMVGRFPLAVIDIQIDPYLADVNVHPTKQEVRISKEKELMQLIREAI 322
>gi|302342260|ref|YP_003806789.1| DNA mismatch repair protein MutL [Desulfarculus baarsii DSM 2075]
gi|301638873|gb|ADK84195.1| DNA mismatch repair protein MutL [Desulfarculus baarsii DSM 2075]
Length = 615
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 185/380 (48%), Gaps = 33/380 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
+ LP+ V N + +G V+ V++ELV N++DAGA +V + V ++V DDG G
Sbjct: 10 VRLLPDEVANQIAAGEVVERPASVLKELVENALDAGARRVQIDVEAAGRGLIRVADDGHG 69
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S D L+L ERHA TSKLG DD G+ T GFRGEAL SI+ VS L I T+
Sbjct: 70 MSADDLLLAVERHA-TSKLGQ---ADDLIGVRTLGFRGEALPSIASVSRLRITTRQAADE 125
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V++G G R VG+TV +RDLF+N P RRK+++ + H + +
Sbjct: 126 VGALLVIEGGVIRQSGQIGCR--VGSTVEARDLFFNIPARRKFLRGQITEAGH-LSAALT 182
Query: 183 RIALVHPKVSFKF-IDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
R+AL P V+F++ + ++ +L T + +A L+ G E + + ++ G + +
Sbjct: 183 RLALGWPGVAFRYAVGGKALHDLPATDDLTGRVAGLL---GREAAAHMVGLDQRVGPIRL 239
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
G ++P S S +V++N R+V K+L H +A +G L +R
Sbjct: 240 WGLAATPAHSRSAADQVFVFVNGRFVRD----KILLHAVG--------QAYHGLLPAERR 287
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV----LAFIERAIRSAWMKKIAH 357
P +L+L L D+ P K V F+ V + + R + A +
Sbjct: 288 -----PVAVLHLELDPELVDVNVHPAKIEVRFRQQREVHDALVLALRRGLAQAAPARGVA 342
Query: 358 DSFDVDMLEDAELPLESSRF 377
+F D A L +E + +
Sbjct: 343 PAFGGDASAPAPLAVEKAAW 362
>gi|295110016|emb|CBL23969.1| DNA mismatch repair protein MutL [Ruminococcus obeum A2-162]
Length = 674
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 186/366 (50%), Gaps = 30/366 (8%)
Query: 2 GTINRLPEAVRNTV---RSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVV 57
G + ++ +NT+ +G V+ + VV+ELV N++DAGAT V V + +++
Sbjct: 3 GALRKIAVLDQNTIDKIAAGEVVERPSSVVKELVENAIDAGATAVTVEITDGGKKLIRIT 62
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+GSG+ + + L RHA TSK+ + D++ I + GFRGEAL+SI+ VS +E+ITK
Sbjct: 63 DNGSGMESEQIPLAFLRHA-TSKIEKVEDLEH---IASLGFRGEALSSIAAVSQVELITK 118
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
+G R V++G K + L ++ GTT + R+LFYN P R K+++S + + +
Sbjct: 119 TPSDISGSRYVIEGGKEIAL--EELGAPEGTTFLVRNLFYNTPARSKFLKSDMTEA-NYI 175
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ ++AL HP++SFK+I +++ L T + S ++ S +G E L +VN +
Sbjct: 176 HTLMEQLALSHPEISFKYI--QNKQVKLHTSGNYSVKDVIYSVYGREIAKALLDVNYENS 233
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+++ G++ P + ++F+ YIN RYV I K + + A GFL
Sbjct: 234 FMKVEGFVGKPEIARGNRSFENYYINGRYVKNNIITKAIEN------------AYRGFLM 281
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
+ P L + + D+ P K V F + V + +RSA +K
Sbjct: 282 QHK-----FPFVSLRMEMEGNDLDVNVHPAKREVRFAREQEVYDAVYDMVRSALTRKEMI 336
Query: 358 DSFDVD 363
VD
Sbjct: 337 PKVSVD 342
Score = 41.2 bits (95), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 29/191 (15%)
Query: 1188 VIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWI 1247
+IDQHAA E++ E + + S YL + L ++L + + + +G+
Sbjct: 507 IIDQHAAHEKVYYERMVKQFREHSIDS-QYLSPPMIVTLSMQEEEVLNSNKDYFEQFGF- 564
Query: 1248 CNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLSDVDLLEFLQQLADTDGSSTT 1306
I G R + + AVP ++G+ D+ FL+ L + G+++
Sbjct: 565 -EIENFGGREYR--------------ISAVPSNLYGLTEEDL----FLEMLDNLSGNNSR 605
Query: 1307 PPSVLRVLNSK----ACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVN 1362
L + SK AC+ A+ ++ E +++EL + C HGRPT + +
Sbjct: 606 --DALDIFASKLATMACKAAVKGNHAMSFEEAEKLIDELLTLDNPYHCPHGRPTIIAMTR 663
Query: 1363 LEALHKQIAQL 1373
E L K+ ++
Sbjct: 664 TE-LEKKFKRI 673
>gi|387762212|ref|YP_006069189.1| DNA mismatch repair protein MutL [Streptococcus salivarius 57.I]
gi|339292979|gb|AEJ54326.1| DNA mismatch repair protein MutL [Streptococcus salivarius 57.I]
Length = 647
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 178/354 (50%), Gaps = 39/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+++ + + RHA TSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 61 GEGMAQADVAMSLRRHA-TSKIKNQGDL---FRIRTLGFRGEALPSIASISYLTIVTAAD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G G + V KG + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 117 GEAYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 226 NSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD--------- 270
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G+ G + P +++++ L D+ P K V + ++A I AI
Sbjct: 271 GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|168486054|ref|ZP_02710562.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC1087-00]
gi|419441616|ref|ZP_13981651.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13224]
gi|419509519|ref|ZP_14049164.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP141]
gi|421212219|ref|ZP_15669185.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070108]
gi|421214444|ref|ZP_15671379.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070109]
gi|183570845|gb|EDT91373.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC1087-00]
gi|379555112|gb|EHZ20181.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13224]
gi|379634705|gb|EHZ99269.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP141]
gi|395582064|gb|EJG42527.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070108]
gi|395582797|gb|EJG43247.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070109]
Length = 649
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 207/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|262283653|ref|ZP_06061418.1| DNA mismatch repair protein mutL [Streptococcus sp. 2_1_36FAA]
gi|262260710|gb|EEY79411.1| DNA mismatch repair protein mutL [Streptococcus sp. 2_1_36FAA]
Length = 648
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 216/470 (45%), Gaps = 60/470 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSLDAGASQITIEIEEAGLKTIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 117 NGQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 172 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 270 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ 329
Query: 355 IAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ER 408
D++ DA L S + Q+S L + L +Q D + ++
Sbjct: 330 --------DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQ 381
Query: 409 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
I+F++ K E E +E P S+S+ FAE + ++DH
Sbjct: 382 ISFEKSAKPVHEATNEKSE------PPQSTSV---KFAERKLVSYDQLDH 422
>gi|225873493|ref|YP_002754952.1| DNA mismatch repair protein MutL [Acidobacterium capsulatum ATCC
51196]
gi|254766152|sp|C1F876.1|MUTL_ACIC5 RecName: Full=DNA mismatch repair protein MutL
gi|225794076|gb|ACO34166.1| DNA mismatch repair protein MutL [Acidobacterium capsulatum ATCC
51196]
Length = 665
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 171/380 (45%), Gaps = 55/380 (14%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I L + V N + +G V+ VV+EL+ N++DA AT++ V V ++V D+
Sbjct: 1 MGRIRVLSDQVANQIAAGEVVDRPASVVKELLENAIDAEATRIRVEVEAGGRKLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ RD +L ERHA TSK+ DD I T GFRGEAL SI+ +S LE+IT+A
Sbjct: 61 GIGMMRDDAMLAFERHA-TSKI---RSSDDLLTIATLGFRGEALPSIASISRLEMITRAQ 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G + G K L ++D GT+ RDLFYN P RRK++++ ++ H V
Sbjct: 117 GEETGTCIEIAGGKMLR--VEDAGAPPGTSFTIRDLFYNTPARRKFLKAESTELSH-VSA 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA----- 234
V AL HP F+ + LL + P + FG E + L + A
Sbjct: 174 LVTHYALAHPDKHFEL--HSATHALLNAPPVNEPSERVFQIFGAETLNQLIPMAAERPFD 231
Query: 235 -------------------NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKL 275
+ G L + G+IS P + Y++IN R V +L
Sbjct: 232 RAGLPEPPPWRRDQDYEPPDPGFLRVKGFISKPALQKLNRNSIYIFINRRLVRD----RL 287
Query: 276 LNHLAASFDCSDSWKANNGFLKGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVF 333
+ H +G R+ + P LL L P D+ P KT V F
Sbjct: 288 ILH---------------AITEGYRNIIPPTSFPVALLFLEMPPHEVDVNVHPAKTEVRF 332
Query: 334 KDWEPVLAFIERAIRSAWMK 353
+ + F+ +IR+A MK
Sbjct: 333 RQSSVLHDFLRDSIRNALMK 352
>gi|423359246|ref|ZP_17336749.1| DNA mismatch repair protein mutL [Bacillus cereus VD022]
gi|401085118|gb|EJP93364.1| DNA mismatch repair protein mutL [Bacillus cereus VD022]
Length = 647
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 174/354 (49%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I+GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TITGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|325956128|ref|YP_004286738.1| DNA mismatch repair protein [Lactobacillus acidophilus 30SC]
gi|325332693|gb|ADZ06601.1| DNA mismatch repair protein [Lactobacillus acidophilus 30SC]
Length = 626
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 188/386 (48%), Gaps = 36/386 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MPKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI RD + L RH ATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIERDQVDLAFTRH-ATSKISNEHDL---FKVSTLGFRGEALASISAVSHVEILTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G G R G G +D GT + +DLF+N P R KY++ SP+ + +
Sbjct: 115 TDG-AIGTRATFSGGNK--KGQEDAASQKGTKITVQDLFFNTPARLKYLR-SPRTEIMKI 170
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R+AL +P+VSF + + LL T + + + + +G ++++ A D
Sbjct: 171 VDIINRLALGYPQVSFTLSN--TGKILLRTTGNGNLKQTVANVYGRHIAEKMEDIEAEDT 228
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+++G IS P + S + F + +N RY+ +++ N +
Sbjct: 229 DFKVTGLISKPELTRSTRNFISILLNGRYIR-------------------NFQLNTAIMD 269
Query: 298 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
G SK + P +++++ L D+ P K V + + I AI +A ++K+
Sbjct: 270 GYGSKLEVRHYPIAVVSIKVDPLLVDVNVHPTKQEVRLSKEKELSRLITTAISNALVEKV 329
Query: 356 AHDSFDVDMLEDAELPLESSRFQSHQ 381
S ++ E ++ +F +Q
Sbjct: 330 EQTSAFANLENKRETLVDQLQFNLNQ 355
>gi|157151210|ref|YP_001451301.1| DNA mismatch repair protein [Streptococcus gordonii str. Challis
substr. CH1]
gi|189030419|sp|A8AZU1.1|MUTL_STRGC RecName: Full=DNA mismatch repair protein MutL
gi|157076004|gb|ABV10687.1| DNA mismatch repair protein hexB [Streptococcus gordonii str.
Challis substr. CH1]
Length = 647
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 216/471 (45%), Gaps = 63/471 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKTIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 117 NGQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 172 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 270 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIAASLKEQ 329
Query: 355 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKN----LAKQRDHMFHKEC---E 407
D++ DA L S + + S PLK K+R+ F K +
Sbjct: 330 --------DLIPDALENLAKSTVK-RATKPEQTSLPLKENRLYYDKERNDFFLKPQVAEQ 380
Query: 408 RITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
+I+F+E + E +E E P+ +S FAE P ++DH
Sbjct: 381 QISFEESAEPIHEATDEKAE------PQPTSV----KFAERKPASYDQLDH 421
>gi|385261867|ref|ZP_10039984.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. SK643]
gi|385192589|gb|EIF39994.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. SK643]
Length = 649
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 169/350 (48%), Gaps = 31/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
SK P ++++ L D+ P K V + ++A + AI
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAI 322
>gi|321257301|ref|XP_003193541.1| mismatch repair-related protein [Cryptococcus gattii WM276]
gi|317460011|gb|ADV21754.1| Mismatch repair-related protein, putative [Cryptococcus gattii
WM276]
Length = 760
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 159/293 (54%), Gaps = 18/293 (6%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC--YVKVVD 58
M I LP T+RS +L L ++ EL+ NS+DAGATK+ YV + ++V D
Sbjct: 1 MPDILPLPRPTSTTLRSSIILPSLAQIFSELLQNSLDAGATKIECYVNMAKGSESLRVED 60
Query: 59 DGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 118
DG+GIS+DGL +G+R TSK H + +G++GFRGEALASI+ +SLL+I T+
Sbjct: 61 DGTGISKDGLAKIGKRF-RTSKEIHEGGLGP---VGSYGFRGEALASIASLSLLDITTRR 116
Query: 119 HGRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
P Y K++K SK L+ G + +R GTTVV R++F PVRR+ + ++ +L
Sbjct: 117 ASFPV-YTKILKHSKTLFEGPNPDRHIAGGHGTTVVVREIFRTIPVRREELAATSSTLLM 175
Query: 176 S-VKKCVLRIALVHPKVSFKFIDMESE-----DELLCTCSSSSPLALLISSFGIEDFSFL 229
+ +KK V +AL +P V + + S ++ +S S L + S +G +
Sbjct: 176 TQLKKVVETLALGNPGVRWVLWEERSTGTGGLKRIMGVNASESALDVFKSLYGSALVHSV 235
Query: 230 DEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAAS 282
++ G ++ G+IS D KA Q++YIN + +G IH + AS
Sbjct: 236 QKIRVTAGKKKVDGFISISGD--VSKAHQHLYINKYPIDRGDIHTAIARKFAS 286
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 136/297 (45%), Gaps = 47/297 (15%)
Query: 1118 RNGHPQTTNN--NISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDK 1175
R GH + ++ +++C H N++ + S F I+KS L + VL QVD+
Sbjct: 442 RPGHGVSDDDVASLACCSHEPTNLVSLQSPF-----PFTTDVQISKSSLSEGIVLGQVDQ 496
Query: 1176 KFIPVVAGGT-----LAVIDQHAADERIRLEELRHKVLSGEGK---SVAYLDAEQELV-L 1226
KFI VV T LA++DQHAADERI +E++ ++ G + SVA L Q ++ L
Sbjct: 497 KFIAVVLHTTINLTTLALVDQHAADERISVEKVLLELCEGFARDDLSVAELTKTQPMIIL 556
Query: 1227 PEIGYQLLQ--NFAEQIKDWGWICNIHTQGSRSFNKN-------LNLLQR-------QIT 1270
+ ++L K WG + ++ S+ L LL R ++T
Sbjct: 557 TQAETRILSQPGVLPLFKRWGIRLTVPSELSQGEYVQVKVDAVPLALLNRLGRKEGLEMT 616
Query: 1271 VITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST---------------TPPSVLRVLN 1315
+ +P + +L++ L+ A G P +L + N
Sbjct: 617 RLVRGYLPVVEEHTGEITNLVKNLEGKAMVGGEGGDIEGYGGDWGRVMRFMPREMLELAN 676
Query: 1316 SKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQ 1372
SKACRGAIMF D L +C +V +L +T F CAHGRP+ VPLV L K I +
Sbjct: 677 SKACRGAIMFEDRLSYDQCGRLVHQLSRTRFPFMCAHGRPSMVPLVILNEQDKPITK 733
>gi|403411875|emb|CCL98575.1| predicted protein [Fibroporia radiculosa]
Length = 912
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 174/381 (45%), Gaps = 43/381 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I+ LP ++ +RS +L +++ ELV NS+DAGA ++ + V + V DDG GI
Sbjct: 12 IHPLPSETQSKLRSTQILTSFPQIISELVQNSLDAGAKQIDIGVDCEDWACWVRDDGVGI 71
Query: 64 SRDGL-VLLGERHA---ATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
RD VL G A TSK A +D + TFGFRGEALAS +D+S LEI ++
Sbjct: 72 GRDSFDVLAGGSEAGRYGTSKAYSSASLDQ---VSTFGFRGEALASAADLSCLEISSRTA 128
Query: 120 GRPNGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQ-----------------P 160
+ ++KG LY G + R GT V RD FYN P
Sbjct: 129 RSRESWSVILKGRAVLYNGPSVRWRRDTPGTVVFVRDAFYNVRQSVLTVSLGTDDPRKLP 188
Query: 161 VRRKYMQSSPKKVLHSVKKCVLRIALVHPKVSFKFIDMESEDE-------LLCTCSSSSP 213
+RR SP + + +++ V +L+ P VSF F + E ++ +SS
Sbjct: 189 IRR-LSHPSPVRTIELIRRDVETSSLMFPNVSFTFENSHKAKEGDPGKGRIMTVPRTSSS 247
Query: 214 LALLISSFGIEDFSFLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIH 273
LA +G ++E++ D + + G+IS D KA+Q++YIN + +H
Sbjct: 248 LATFRHLYGKALAQHIEEIDETDDQMRLHGFIS--LDGAQSKAYQFLYINRHILSPCDLH 305
Query: 274 KLLN-------HLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDP 326
+L++ + +FD L+ KS+ PA++LNL P L D +P
Sbjct: 306 RLIDAQFSKSSFMKHAFDEEGETSQPRLNLRRSPRKSEKKPAFVLNLTVPPRLVDNCIEP 365
Query: 327 LKTHVVFKDWEPVLAFIERAI 347
K V ++ F+ I
Sbjct: 366 AKASVQLQNSGAASKFLGNVI 386
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 115/276 (41%), Gaps = 73/276 (26%)
Query: 1156 PDSINKSCLEDAKVLQQVDKKFIPVV------AGGTLAVIDQHAADERIRLEELRHKVLS 1209
P NK+ L DA++L QVD+KFI + G L +IDQHAADER+R+E ++
Sbjct: 613 PGRFNKTALHDAEILGQVDRKFIACMLAAECDKGKALVLIDQHAADERVRVERFLKELCL 672
Query: 1210 G-----------EGKSVAYLDAEQELVLPEIGYQ----LLQNFAEQI---------KDWG 1245
G G + L ++ + + E+ + L ++ E++ K WG
Sbjct: 673 GFLQGYPPSHASAGDTTDLLSGQRSVTVRELVHPVPVLLTRHEVEKLAAGDVQVAFKLWG 732
Query: 1246 WICNIHTQGSRSF--------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQ- 1296
+ SF + + QR + + VP + L D L+ L +
Sbjct: 733 LAFTRLDEALESFADPFADKVGDDGSGCQRDYVQVHVRTVPEVVADKLLAGDELKDLVKG 792
Query: 1297 -LADTDGSSTTPPS----------------------------VLRVLNSKACRGAIMFGD 1327
LA D PS +L ++NSKACRGAIMF D
Sbjct: 793 YLAKLDAEGAPMPSASQLKSGDPSACEEGAEWQKAMRWCPRELLELVNSKACRGAIMFND 852
Query: 1328 SLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
L +C +V+ L QT+L FQ P+ VPL ++
Sbjct: 853 PLTLDQCTSLVQRLAQTALPFQ-----PSLVPLADV 883
>gi|218898868|ref|YP_002447279.1| DNA mismatch repair protein [Bacillus cereus G9842]
gi|423561824|ref|ZP_17538100.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-A1]
gi|226723027|sp|B7ITM0.1|MUTL_BACC2 RecName: Full=DNA mismatch repair protein MutL
gi|218541786|gb|ACK94180.1| DNA mismatch repair protein MutL [Bacillus cereus G9842]
gi|401202081|gb|EJR08946.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-A1]
Length = 647
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 174/354 (49%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I+GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TITGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|419529357|ref|ZP_14068892.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40028]
gi|379576261|gb|EHZ41189.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40028]
Length = 649
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLNLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTESTRPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|418038830|ref|ZP_12677146.1| hypothetical protein LLCRE1631_01953 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|354692837|gb|EHE92642.1| hypothetical protein LLCRE1631_01953 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 695
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 174/353 (49%), Gaps = 31/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
+G I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 40 VGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 99
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ ++ + L RH ATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 100 GLGLEKEDVALALRRH-ATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSTA 155
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G + + KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 156 EEESGTKLIAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITD 212
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D
Sbjct: 213 IINRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDF 270
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK-- 297
E++GY+S P + + + + + IN R++ ++ N L+
Sbjct: 271 ELTGYVSIPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGY 311
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
G R P +L+++ +L D+ P K V ++A I +AI A
Sbjct: 312 GNRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAIDEA 364
>gi|238916922|ref|YP_002930439.1| DNA mismatch repair protein MutL [Eubacterium eligens ATCC 27750]
gi|238872282|gb|ACR71992.1| DNA mismatch repair protein MutL [Eubacterium eligens ATCC 27750]
Length = 625
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 180/347 (51%), Gaps = 39/347 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVVDDG 60
I L + N + +G V+ + VV+ELV N++DAGAT + V + G+ +++V D+G
Sbjct: 3 ITLLDQNTINKIAAGEVVERPSSVVKELVENAIDAGATAITVEIKEGGIS--FIRVTDNG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
SGI++D + + +RHA TSK+ + D+ + + GFRGEALASI+ VS +E+ITK
Sbjct: 61 SGINKDEIEIAFKRHA-TSKIESIEDL---MAVSSLGFRGEALASIAAVSQVELITKTAD 116
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G R + G G+ E ++ GTT + R+LFYN PVRRK+++++ + +
Sbjct: 117 SLSGVRYTIDG------GVPGEVAEIGAPEGTTFIVRNLFYNTPVRRKFLKTATTEGGY- 169
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V +AL HP +SF+FI + L T + + ++ + +G + + L E++
Sbjct: 170 IGSLVEYLALSHPDISFRFIS--NNQNKLHTSGNMNLKDIIYNVYGRDITNNLYEISGKS 227
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+E SG+I P + ++ YIN RY+ I K + D++K GF+
Sbjct: 228 QDIEASGFIGKPMVVRGNRTYENYYINGRYIKSSIITKAI---------EDAYK---GFI 275
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 343
P ++ + ++ D+ P K + F + E + F+
Sbjct: 276 -----MPHNYPFSAIHFKINPAIIDVNVHPTKMELRFSNNEYIYNFV 317
>gi|322375073|ref|ZP_08049587.1| DNA mismatch repair protein HexB [Streptococcus sp. C300]
gi|321280573|gb|EFX57612.1| DNA mismatch repair protein HexB [Streptococcus sp. C300]
Length = 649
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 205/438 (46%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAMD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + + +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIAIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
S D LE+ L + R + T L PLK + +++++ E + + E
Sbjct: 330 -SLIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSKPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL EE ++ F++
Sbjct: 379 DHQVELTEEGRDLTLFAK 396
>gi|315037643|ref|YP_004031211.1| DNA mismatch repair protein [Lactobacillus amylovorus GRL 1112]
gi|312275776|gb|ADQ58416.1| DNA mismatch repair protein [Lactobacillus amylovorus GRL 1112]
Length = 626
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 188/386 (48%), Gaps = 36/386 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MPKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI RD + L RH ATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIERDQVDLAFTRH-ATSKISNEHDL---FKVSTLGFRGEALASISAVSHVEILTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G G R G G +D GT + +DLF+N P R KY++ SP+ + +
Sbjct: 115 TDG-AIGTRATFSGGNK--KGQEDAASQKGTKITVQDLFFNTPARLKYLR-SPRTEIMKI 170
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R+AL +P+VSF + + LL T + + + + +G ++++ A D
Sbjct: 171 VDIINRLALGYPQVSFTLSN--TGKILLRTTGNGNLKQTVANVYGRHIAEKMEDIEAEDT 228
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+++G IS P + S + F + +N RY+ +++ N +
Sbjct: 229 DFKVTGLISKPELTRSTRNFISILLNGRYIR-------------------NFQLNTAIMD 269
Query: 298 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
G SK + P +++++ L D+ P K V + + I AI +A ++K+
Sbjct: 270 GYGSKLEVRHYPIAVVSIKVDPLLVDVNVHPTKQEVRLSKEKELSRLITTAISNALVEKV 329
Query: 356 AHDSFDVDMLEDAELPLESSRFQSHQ 381
S ++ E ++ +F +Q
Sbjct: 330 EQTSAFANLENKRETLVDQLQFNLNQ 355
>gi|228966711|ref|ZP_04127755.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402558904|ref|YP_006601628.1| DNA mismatch repair protein [Bacillus thuringiensis HD-771]
gi|228792810|gb|EEM40368.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
sotto str. T04001]
gi|401787556|gb|AFQ13595.1| DNA mismatch repair protein [Bacillus thuringiensis HD-771]
Length = 647
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 174/354 (49%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I+GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TITGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|218290140|ref|ZP_03494302.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius
LAA1]
gi|218239849|gb|EED07038.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius
LAA1]
Length = 628
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 168/352 (47%), Gaps = 29/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVD 58
MG I +P+ + + + SG V+ V+ELV NS+DAGAT++ V + G C V VVD
Sbjct: 1 MGKIQVMPKVMADQIASGEVVARPASCVKELVENSLDAGATRIEVSLAEGGIAC-VTVVD 59
Query: 59 DGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 118
DG G+S + VL RHA TSK+ D+ I T GFRGEALA+I+ V+ + +IT+A
Sbjct: 60 DGEGMSPEDAVLAFHRHA-TSKVHEPRDL---ARIRTLGFRGEALAAIASVARVRLITRA 115
Query: 119 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G +G ++G + + GTT+ RDLF+N P R KY++S+ + SV
Sbjct: 116 RGEESGVLVRVEGGEI--HPPEPVGAPFGTTMEVRDLFFNTPARLKYLRSAQTEQARSV- 172
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ V R +L HP+V+ F+ L T + + +G+ + L EV+ G
Sbjct: 173 EVVQRESLAHPEVA--FVCRTERQVLFQTPGRGDAREVWAALYGVGEARMLLEVHGATGD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ GY+ P + S + Y++IN R V + + + G
Sbjct: 231 YALRGYVGRPTQARSSRQHGYLFINGRPVRNPAVQQAVER-----------------AYG 273
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
+R P Y L L +L D P K V + V +E A+R+A
Sbjct: 274 ERLMVGRYPVYALYLEMDPALVDPNVHPQKWEVRLSEERDVCDLVESAVRAA 325
>gi|322374232|ref|ZP_08048764.1| DNA mismatch repair protein HexB [Streptococcus sp. C150]
gi|321276836|gb|EFX53909.1| DNA mismatch repair protein HexB [Streptococcus sp. C150]
Length = 647
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 178/354 (50%), Gaps = 39/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+++ + + RHA TSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 61 GEGMAQADVAMSLRRHA-TSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAAD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G G + V KG + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 117 GEAYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 226 NSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD--------- 270
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G+ G + P +++++ L D+ P K V + ++A I AI
Sbjct: 271 GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|331267171|ref|YP_004326801.1| DNA mismatch repair protein MutL [Streptococcus oralis Uo5]
gi|326683843|emb|CBZ01461.1| DNA mismatch repair protein MutL [Streptococcus oralis Uo5]
Length = 649
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGQV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EI+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E + + E
Sbjct: 330 -ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSKPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL EE ++ F++
Sbjct: 379 DHQVELTEEGRDLTLFAK 396
>gi|421451448|ref|ZP_15900809.1| DNA mismatch repair protein mutL [Streptococcus salivarius K12]
gi|421453484|ref|ZP_15902840.1| DNA mismatch repair protein mutL [Streptococcus salivarius K12]
gi|400181793|gb|EJO16060.1| DNA mismatch repair protein mutL [Streptococcus salivarius K12]
gi|400181879|gb|EJO16141.1| DNA mismatch repair protein mutL [Streptococcus salivarius K12]
Length = 645
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 196/401 (48%), Gaps = 52/401 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+++ + + RHA TSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 61 GEGMAQADVAMSLRRHA-TSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAAD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G G + V KG + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 117 GEAYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 226 NSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD--------- 270
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
G+ G + P +++++ L D+ P K V + ++A I AI + +
Sbjct: 271 GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAIAQSLRE 328
Query: 354 KIAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 392
+ D++ DA L S+R S T L PLK
Sbjct: 329 Q--------DLIPDALENLAKSSTRGVSKPVQTSL---PLK 358
>gi|419780685|ref|ZP_14306528.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK100]
gi|383185061|gb|EIC77564.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK100]
Length = 649
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIRNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EI+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E + + E
Sbjct: 330 -ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSKPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL EE ++ F++
Sbjct: 379 DHQVELTEEGRDLPLFAK 396
>gi|384181578|ref|YP_005567340.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324327662|gb|ADY22922.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229157347|ref|ZP_04285425.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 4342]
gi|228626074|gb|EEK82823.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 4342]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|423604603|ref|ZP_17580496.1| DNA mismatch repair protein mutL [Bacillus cereus VD102]
gi|401245223|gb|EJR51581.1| DNA mismatch repair protein mutL [Bacillus cereus VD102]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|303259226|ref|ZP_07345204.1| DNA mismatch repair protein [Streptococcus pneumoniae SP-BS293]
gi|303260982|ref|ZP_07346931.1| DNA mismatch repair protein [Streptococcus pneumoniae SP14-BS292]
gi|303263309|ref|ZP_07349232.1| DNA mismatch repair protein [Streptococcus pneumoniae BS397]
gi|303265474|ref|ZP_07351374.1| DNA mismatch repair protein [Streptococcus pneumoniae BS457]
gi|303267968|ref|ZP_07353770.1| DNA mismatch repair protein [Streptococcus pneumoniae BS458]
gi|418138527|ref|ZP_12775359.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA13338]
gi|418179562|ref|ZP_12816137.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41688]
gi|421295458|ref|ZP_15746173.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58581]
gi|302637819|gb|EFL68305.1| DNA mismatch repair protein [Streptococcus pneumoniae SP14-BS292]
gi|302639644|gb|EFL70101.1| DNA mismatch repair protein [Streptococcus pneumoniae SP-BS293]
gi|302642664|gb|EFL73009.1| DNA mismatch repair protein [Streptococcus pneumoniae BS458]
gi|302644914|gb|EFL75161.1| DNA mismatch repair protein [Streptococcus pneumoniae BS457]
gi|302647082|gb|EFL77306.1| DNA mismatch repair protein [Streptococcus pneumoniae BS397]
gi|353846984|gb|EHE27011.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41688]
gi|353906234|gb|EHE81638.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA13338]
gi|395897527|gb|EJH08486.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58581]
Length = 649
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 205/438 (46%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L + T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLSTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP+ SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPETSFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPTRPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL EE ++ F++
Sbjct: 379 DYQVELTEERQDLTLFAK 396
>gi|52141721|ref|YP_085109.1| DNA mismatch repair protein [Bacillus cereus E33L]
gi|81686628|sp|Q636Q8.1|MUTL_BACCZ RecName: Full=DNA mismatch repair protein MutL
gi|51975190|gb|AAU16740.1| DNA mismatch repair protein, MutL family [Bacillus cereus E33L]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|218904896|ref|YP_002452730.1| DNA mismatch repair protein [Bacillus cereus AH820]
gi|226723026|sp|B7JJ46.1|MUTL_BACC0 RecName: Full=DNA mismatch repair protein MutL
gi|218536438|gb|ACK88836.1| DNA mismatch repair protein MutL [Bacillus cereus AH820]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIQGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|404406120|ref|ZP_10997704.1| DNA mismatch repair protein MutL [Alistipes sp. JC136]
Length = 661
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 174/370 (47%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LPE V N + +G V+ VV+E++ N++DAGAT V V + +++VDDG G
Sbjct: 5 IRLLPEVVANQIAAGEVVNRPASVVKEMMENAIDAGATSVKVNFRDGGKDLIQIVDDGCG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + +RHA TSK+G + D+ + TFGFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSPIDARMAFDRHA-TSKIGAVEDI---YALHTFGFRGEALASIAAVAQVELRTRQAGDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + + G + + + VG+ R+LFYN P RR+++ S +K
Sbjct: 121 VGTQTEINGGQ--FAAQNPVMCPVGSQFFVRNLFYNVPARRRFLDKSTTSA-SQIKAEFQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIAL +P+++F ++ + D + T +SS ++ G L EV A+ I
Sbjct: 178 RIALCNPQIAF---ELYANDAPVYTLQASSLAGRIVDVVGRHIKQNLLEVEADTSIARIE 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GYI P + QY+++N R+ +S+ S KA K
Sbjct: 235 GYIGRPAAAKKRNTEQYLFVNGRF------------FKSSYLTSAILKAYE-----KLIP 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
+ P+Y L L D+ P KT V F D E V I A+R K A D
Sbjct: 278 ENSQPSYFLFLEIDPGRIDVNVHPQKTEVKFADEEAVWQIINAAVRETLAKTGAVPLMDF 337
Query: 363 DMLEDAELPL 372
D E+P+
Sbjct: 338 DREGMVEIPV 347
>gi|291543952|emb|CBL17061.1| DNA mismatch repair protein MutL [Ruminococcus champanellensis
18P13]
Length = 657
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 182/356 (51%), Gaps = 35/356 (9%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
+I LP+ + + +G V+ V++ELV NS+DAGA+++ V + + Y+++ DDG
Sbjct: 2 SITVLPKELSELIAAGEVIERPASVIKELVENSIDAGASRITVEIRNGGSVYMRITDDGC 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI+ + + RHA TSK+ AD+D+ I T GFRGEALAS++ V +E++TK G
Sbjct: 62 GIAPEEVPTAFLRHA-TSKILEKADLDN---IHTLGFRGEALASVAAVGRVEMLTKQAGA 117
Query: 122 PNGYR-KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS--VK 178
G R ++ G++C G++ GTT+V RDLF+N P R+K+++ K V S V
Sbjct: 118 EYGVRYQIEGGTEC---GMERTGCPEGTTIVIRDLFFNVPARQKFLK---KDVTESNAVS 171
Query: 179 KCVLRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
V +IAL HP+++F I D E + + + + +G L V+ ++
Sbjct: 172 AIVQKIALSHPEIAFTLIRDHRRE---FHAAGDGTLYSAIYAVYGRSFAQDLLPVSYSEN 228
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ + GY+ P + + ++ Q +IN RYV + S ++++ +
Sbjct: 229 GISLEGYVIKPLYAKNNRSLQTFFINGRYV---------KSVTCSVALEEAYR--TLVMT 277
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
GK PA +L L P D+ P K V F D + V + + +++A M+
Sbjct: 278 GK------FPACVLMLTVPPETVDVNVHPAKAAVRFTDEKRVSSAVFFGVKNALMQ 327
Score = 41.6 bits (96), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 33/212 (15%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
+V+ + +I AG +L +ID+HAA ER+ E+ R + + + + L++ EL+L
Sbjct: 473 RVIGEAFTNYILAQAGDSLYIIDKHAAHERVLFEQFRDASRTPDSQMI--LNS-SELLLS 529
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHT------QGSRSFNKNLNLLQRQITVITLLAVPCIF 1281
+ LQ E +K G+ + +LNL + ++ LA +
Sbjct: 530 VAEFDALQANQEALKQRGFAFDFSNPPYVAVCAVPVVCASLNLDE----LVLELAENLVL 585
Query: 1282 GVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEEL 1341
G Q LA T L++ AC+ AI GD SE + EE+
Sbjct: 586 G-----------KQDLASTQLEDA--------LHTMACKAAIRAGDKNDLSELQALAEEV 626
Query: 1342 KQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1373
C HGRP L E + KQ ++
Sbjct: 627 FGNERIRHCPHGRPVLFELTRHE-IEKQFKRV 657
>gi|194398020|ref|YP_002036880.1| DNA mismatch repair protein [Streptococcus pneumoniae G54]
gi|418120296|ref|ZP_12757244.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44194]
gi|419490165|ref|ZP_14029907.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47179]
gi|421274150|ref|ZP_15724984.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA52612]
gi|238690840|sp|B5E6C5.1|MUTL_STRP4 RecName: Full=DNA mismatch repair protein MutL
gi|194357687|gb|ACF56135.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae G54]
gi|353794851|gb|EHD75203.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44194]
gi|379596445|gb|EHZ61249.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47179]
gi|395875985|gb|EJG87062.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA52612]
Length = 649
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 169/350 (48%), Gaps = 31/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
SK P ++++ L D+ P K V + ++A + AI
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAI 322
>gi|49479185|ref|YP_037829.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|81828232|sp|Q6HF47.1|MUTL_BACHK RecName: Full=DNA mismatch repair protein MutL
gi|49330741|gb|AAT61387.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQTAFKK 327
>gi|387783196|ref|YP_006069279.1| DNA mismatch repair protein mutL [Streptococcus salivarius JIM8777]
gi|338744078|emb|CCB94444.1| DNA mismatch repair protein mutL [Streptococcus salivarius JIM8777]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 178/354 (50%), Gaps = 39/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+++ + + RHA TSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 61 GEGMAQADVAMSLRRHA-TSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAAD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G G + V KG + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 117 GEAYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 226 NSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD--------- 270
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G+ G + P +++++ L D+ P K V + ++A I AI
Sbjct: 271 GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|229174433|ref|ZP_04301965.1| DNA mismatch repair protein mutL [Bacillus cereus MM3]
gi|228608993|gb|EEK66283.1| DNA mismatch repair protein mutL [Bacillus cereus MM3]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLMIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>gi|229191893|ref|ZP_04318863.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 10876]
gi|228591444|gb|EEK49293.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 10876]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|206977890|ref|ZP_03238778.1| DNA mismatch repair protein MutL [Bacillus cereus H3081.97]
gi|217961189|ref|YP_002339757.1| DNA mismatch repair protein [Bacillus cereus AH187]
gi|229140409|ref|ZP_04268964.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST26]
gi|375285690|ref|YP_005106129.1| DNA mismatch repair protein mutL [Bacillus cereus NC7401]
gi|423353470|ref|ZP_17331097.1| DNA mismatch repair protein mutL [Bacillus cereus IS075]
gi|423567337|ref|ZP_17543584.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-A12]
gi|226723029|sp|B7HLA2.1|MUTL_BACC7 RecName: Full=DNA mismatch repair protein MutL
gi|206743890|gb|EDZ55309.1| DNA mismatch repair protein MutL [Bacillus cereus H3081.97]
gi|217067416|gb|ACJ81666.1| DNA mismatch repair protein MutL [Bacillus cereus AH187]
gi|228642970|gb|EEK99246.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST26]
gi|358354217|dbj|BAL19389.1| DNA mismatch repair protein mutL [Bacillus cereus NC7401]
gi|401089283|gb|EJP97454.1| DNA mismatch repair protein mutL [Bacillus cereus IS075]
gi|401214425|gb|EJR21155.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-A12]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|30021860|ref|NP_833491.1| DNA mismatch repair protein [Bacillus cereus ATCC 14579]
gi|218231496|ref|YP_002368571.1| DNA mismatch repair protein [Bacillus cereus B4264]
gi|228959975|ref|ZP_04121640.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229047451|ref|ZP_04193043.1| DNA mismatch repair protein mutL [Bacillus cereus AH676]
gi|229111241|ref|ZP_04240795.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-15]
gi|229129045|ref|ZP_04258018.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-Cer4]
gi|229146340|ref|ZP_04274711.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST24]
gi|296504267|ref|YP_003665967.1| DNA mismatch repair protein [Bacillus thuringiensis BMB171]
gi|423385273|ref|ZP_17362529.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1X1-2]
gi|423412427|ref|ZP_17389547.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3O-2]
gi|423431788|ref|ZP_17408792.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4O-1]
gi|423528370|ref|ZP_17504815.1| DNA mismatch repair protein mutL [Bacillus cereus HuB1-1]
gi|423585821|ref|ZP_17561908.1| DNA mismatch repair protein mutL [Bacillus cereus VD045]
gi|423628849|ref|ZP_17604598.1| DNA mismatch repair protein mutL [Bacillus cereus VD154]
gi|423641149|ref|ZP_17616767.1| DNA mismatch repair protein mutL [Bacillus cereus VD166]
gi|423649633|ref|ZP_17625203.1| DNA mismatch repair protein mutL [Bacillus cereus VD169]
gi|81837324|sp|Q81A26.1|MUTL_BACCR RecName: Full=DNA mismatch repair protein MutL
gi|226723028|sp|B7HDP3.1|MUTL_BACC4 RecName: Full=DNA mismatch repair protein MutL
gi|29897416|gb|AAP10692.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 14579]
gi|218159453|gb|ACK59445.1| DNA mismatch repair protein MutL [Bacillus cereus B4264]
gi|228636973|gb|EEK93432.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST24]
gi|228654282|gb|EEL10147.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-Cer4]
gi|228672235|gb|EEL27525.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-15]
gi|228723895|gb|EEL75248.1| DNA mismatch repair protein mutL [Bacillus cereus AH676]
gi|228799718|gb|EEM46670.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|296325319|gb|ADH08247.1| DNA mismatch repair protein [Bacillus thuringiensis BMB171]
gi|401104495|gb|EJQ12472.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3O-2]
gi|401116544|gb|EJQ24382.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4O-1]
gi|401233167|gb|EJR39663.1| DNA mismatch repair protein mutL [Bacillus cereus VD045]
gi|401268394|gb|EJR74442.1| DNA mismatch repair protein mutL [Bacillus cereus VD154]
gi|401280210|gb|EJR86132.1| DNA mismatch repair protein mutL [Bacillus cereus VD166]
gi|401282913|gb|EJR88810.1| DNA mismatch repair protein mutL [Bacillus cereus VD169]
gi|401635329|gb|EJS53084.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1X1-2]
gi|402452033|gb|EJV83852.1| DNA mismatch repair protein mutL [Bacillus cereus HuB1-1]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|385816998|ref|YP_005853388.1| DNA mismatch repair protein [Lactobacillus amylovorus GRL1118]
gi|327182936|gb|AEA31383.1| DNA mismatch repair protein [Lactobacillus amylovorus GRL1118]
Length = 634
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 190/387 (49%), Gaps = 38/387 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MPKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI RD + L RH ATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIERDQVDLAFTRH-ATSKISNEHDL---FKVSTLGFRGEALASISAVSHVEILTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G G R G G +D GT + +DLF+N P R KY++ SP+ + +
Sbjct: 115 TDG-AIGTRATFSGGNK--KGQEDAASQKGTKITVQDLFFNTPARLKYLR-SPRTEIMKI 170
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAND 236
+ R+AL +P+VSF + + ++L + + L +++ +G ++++ A D
Sbjct: 171 VDIINRLALGYPQVSFT---LSNTGKILLRTTGNGNLKQTVANVYGRHIAEKMEDIEAED 227
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+++G IS P + S + F + +N RY+ +++ N +
Sbjct: 228 TDFKVTGLISKPELTRSTRNFISILLNGRYIR-------------------NFQLNTAIM 268
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK +A P +++++ L D+ P K V + + I AI + ++K
Sbjct: 269 DGYGSKLEARHYPIAVVSIKVDPLLVDVNVHPTKQEVRLSKEKELSRLITTAISNVLVEK 328
Query: 355 IAHDSFDVDMLEDAELPLESSRFQSHQ 381
+ S ++ E ++ +F +Q
Sbjct: 329 VEQTSAFANLENKRETLVDQLQFNLNQ 355
>gi|301055258|ref|YP_003793469.1| DNA mismatch repair protein [Bacillus cereus biovar anthracis str.
CI]
gi|423550482|ref|ZP_17526809.1| DNA mismatch repair protein mutL [Bacillus cereus ISP3191]
gi|300377427|gb|ADK06331.1| DNA mismatch repair protein [Bacillus cereus biovar anthracis str.
CI]
gi|401190098|gb|EJQ97148.1| DNA mismatch repair protein mutL [Bacillus cereus ISP3191]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|225853787|ref|YP_002735299.1| DNA mismatch repair protein [Streptococcus pneumoniae JJA]
gi|254766179|sp|C1CBX8.1|MUTL_STRZJ RecName: Full=DNA mismatch repair protein MutL
gi|225722823|gb|ACO18676.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae JJA]
Length = 649
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 207/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|423401405|ref|ZP_17378578.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-2]
gi|423477890|ref|ZP_17454605.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6X1-1]
gi|401654395|gb|EJS71938.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-2]
gi|402428815|gb|EJV60907.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6X1-1]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLMIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>gi|315221511|ref|ZP_07863431.1| DNA mismatch repair protein [Streptococcus anginosus F0211]
gi|315189345|gb|EFU23040.1| DNA mismatch repair protein [Streptococcus anginosus F0211]
Length = 688
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 173/357 (48%), Gaps = 32/357 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 41 MSKIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLRSIQVIDN 100
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEAL SI+ VS L I T
Sbjct: 101 GEGIEHEEVSLALRRH-ATSKIKKQADL---FRIRTLGFRGEALPSIASVSRLTIETATS 156
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G + +G + L + GT + DLF+N P R KYM+S ++ H V
Sbjct: 157 SGAHGTLLIAQGGEVETL--EPSSCPRGTKIKVEDLFFNTPARLKYMKSQQAELSHIV-D 213
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+V+F ++ E+ T + + + +G+ + E+ A+D
Sbjct: 214 VINRLSLAHPEVAFTLVN--DGKEMTRTAGTGNLRQAIAGIYGLTTAKKMIEILASDLDF 271
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 272 EVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 312
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
SK P ++++R L D+ P K V ++ I +AI SA +K+
Sbjct: 313 GSKLMVGRFPIAVIDIRIDPYLADVNVHPTKQEVRISKERELMVLISQAI-SASLKE 368
>gi|365159456|ref|ZP_09355636.1| DNA mismatch repair protein mutL [Bacillus sp. 7_6_55CFAA_CT2]
gi|363625168|gb|EHL76213.1| DNA mismatch repair protein mutL [Bacillus sp. 7_6_55CFAA_CT2]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGEIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|206972646|ref|ZP_03233588.1| DNA mismatch repair protein MutL [Bacillus cereus AH1134]
gi|206732459|gb|EDZ49639.1| DNA mismatch repair protein MutL [Bacillus cereus AH1134]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|445370540|ref|ZP_21425882.1| DNA mismatch repair protein [Streptococcus thermophilus MTCC 5460]
gi|445385388|ref|ZP_21427590.1| DNA mismatch repair protein [Streptococcus thermophilus MTCC 5461]
gi|444751654|gb|ELW76371.1| DNA mismatch repair protein [Streptococcus thermophilus MTCC 5461]
gi|444751668|gb|ELW76384.1| DNA mismatch repair protein [Streptococcus thermophilus MTCC 5460]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 199/403 (49%), Gaps = 56/403 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V G+ +++
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSK--IQIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G G+++ + + RHA TSK+ + D+ I T GFRGEAL SI+ +S L I+T
Sbjct: 59 DNGEGMAQADVAMSLRRHA-TSKIKNQGDL---FRIRTLGFRGEALPSITSISHLTIVTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKK 172
A G G + V KG + E +D VGT + +LFYN P R KYM+S +
Sbjct: 115 ADGEVYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAE 167
Query: 173 VLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDE 231
+ H V V R++L HP+V+F ++ + L S + L I+ +G+ + E
Sbjct: 168 LAHIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVE 223
Query: 232 VNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 291
++ +D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 224 ISNSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD------- 270
Query: 292 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
G+ G + P +++++ L D+ P K V + ++A I+ AI +
Sbjct: 271 --GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALIKSAIAQSL 326
Query: 352 MKKIAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 392
++ D++ DA L S+R + T L PLK
Sbjct: 327 REQ--------DLIPDALENLAKSSTRGATRSVQTSL---PLK 358
>gi|196038472|ref|ZP_03105781.1| DNA mismatch repair protein MutL [Bacillus cereus NVH0597-99]
gi|228986912|ref|ZP_04147039.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229197879|ref|ZP_04324595.1| DNA mismatch repair protein mutL [Bacillus cereus m1293]
gi|423574625|ref|ZP_17550744.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-D12]
gi|196030880|gb|EDX69478.1| DNA mismatch repair protein MutL [Bacillus cereus NVH0597-99]
gi|228585597|gb|EEK43699.1| DNA mismatch repair protein mutL [Bacillus cereus m1293]
gi|228772861|gb|EEM21300.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|401212150|gb|EJR18896.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-D12]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229123282|ref|ZP_04252486.1| DNA mismatch repair protein mutL [Bacillus cereus 95/8201]
gi|228660058|gb|EEL15694.1| DNA mismatch repair protein mutL [Bacillus cereus 95/8201]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|196034149|ref|ZP_03101559.1| DNA mismatch repair protein MutL [Bacillus cereus W]
gi|228916406|ref|ZP_04079973.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228947489|ref|ZP_04109779.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|195993223|gb|EDX57181.1| DNA mismatch repair protein MutL [Bacillus cereus W]
gi|228812009|gb|EEM58340.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228843209|gb|EEM88290.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229092806|ref|ZP_04223944.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-42]
gi|228690604|gb|EEL44385.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-42]
Length = 647
Score = 140 bits (352), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|418016943|ref|ZP_12656502.1| DNA mismatch repair protein (MutL family) [Streptococcus salivarius
M18]
gi|345527636|gb|EGX30944.1| DNA mismatch repair protein (MutL family) [Streptococcus salivarius
M18]
Length = 645
Score = 140 bits (352), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 178/354 (50%), Gaps = 39/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+++ + + RHA TSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 61 GEGMAQADVAMSLRRHA-TSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAAD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G G + V KG + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 117 GEAYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 226 NSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD--------- 270
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G+ G + P +++++ L D+ P K V + ++A I AI
Sbjct: 271 GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|342162981|ref|YP_004767620.1| DNA mismatch repair protein [Streptococcus pseudopneumoniae IS7493]
gi|383938860|ref|ZP_09992057.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus pseudopneumoniae SK674]
gi|418969224|ref|ZP_13520362.1| DNA mismatch repair protein [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|341932863|gb|AEL09760.1| DNA mismatch repair protein [Streptococcus pseudopneumoniae IS7493]
gi|383352308|gb|EID30024.1| DNA mismatch repair protein [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383714201|gb|EID70210.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus pseudopneumoniae SK674]
Length = 649
Score = 140 bits (352), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVVHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAITNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|220932003|ref|YP_002508911.1| DNA mismatch repair protein MutL [Halothermothrix orenii H 168]
gi|254766169|sp|B8CX97.1|MUTL_HALOH RecName: Full=DNA mismatch repair protein MutL
gi|219993313|gb|ACL69916.1| DNA mismatch repair protein MutL [Halothermothrix orenii H 168]
Length = 644
Score = 140 bits (352), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 176/350 (50%), Gaps = 31/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I RLPE+V N + +G V+ VV+ELV NS+DAG+ K+ + + ++V D+
Sbjct: 1 MPEIKRLPESVANQISAGEVVERPASVVKELVENSLDAGSNKILIEIENGGKDLIRVKDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI D + + +R+A TSK+ D++D + + GFRGEALASI+ VS+L+II++
Sbjct: 61 GHGIPSDEIEIAFDRYA-TSKI---TDINDLYSLKSLGFRGEALASIASVSILDIISRTK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDE--RKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
+ + +KG K I E VGT ++ +DLF+N P R KY++++ + H +
Sbjct: 117 SQTKAIKMRLKGGKV----ISKEPCGASVGTDIIVKDLFFNTPARYKYLKTTRNEFKH-I 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R AL +P V+F I + +L T + L + + +G E L +++ D
Sbjct: 172 SNIITREALAYPGVNFTLI--HNGRIVLKTPGTGKTLDCIYAIYGKEMAQSLVKIDYEDR 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+++SGYIS P ++++ ++N R V + +LN +A G L
Sbjct: 230 YIKVSGYISRPDYYRYNRSYEIFFVNKRAVH----NSILNR--------GVEEAYQGLL- 276
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
A P LNL+ L D+ P K V F + + I+ I
Sbjct: 277 ----PPGAYPVVFLNLKLNPILVDVNVHPTKKEVKFSRDKVIKEVIQNGI 322
Score = 56.6 bits (135), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 111/268 (41%), Gaps = 31/268 (11%)
Query: 1096 LCPHAHLGAQAEGTSIISGTKWR--NGHPQTT--NNNISCDIHNQDNILDISSGLLHLTG 1151
L P G ++ S +S K+ N + T N+N D H + + ++I
Sbjct: 389 LLPSKKNGFYSKKNSQVSQNKFMDINNKLEKTEINDNYKKDKHYKTDSINIKDN------ 442
Query: 1152 EFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGE 1211
I ++ NK + +VL Q+ +I L +IDQH A ERI + K + E
Sbjct: 443 --SIKENKNKMDIPIKRVLGQIKNTYIIAEGRDGLYIIDQHNAHERILYQSFIEKYNNSE 500
Query: 1212 GKSVA-YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQIT 1270
S + E PE ++L+++ Q++ G+ + G SF
Sbjct: 501 IVSQPLVVPVNIETTAPEA--EVLKSYLPQLEKMGFKLEVF--GINSF------------ 544
Query: 1271 VITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLL 1330
+ VP + + + E + +L + D + + +++ +CRGAI G+ L
Sbjct: 545 --IVREVPSLIKKRSNKRVVREVIDKLLEHDKAMKPSELINEIISYMSCRGAIKAGEYLD 602
Query: 1331 PSECALIVEELKQTSLCFQCAHGRPTTV 1358
E I+E L +T ++C HGRP +
Sbjct: 603 KKEAEQIIEGLFKTDNPYRCPHGRPIII 630
>gi|417848825|ref|ZP_12494757.1| DNA mismatch repair protein [Streptococcus mitis SK1080]
gi|339457573|gb|EGP70140.1| DNA mismatch repair protein [Streptococcus mitis SK1080]
Length = 649
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 170/354 (48%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P ++++ L D+ P K V + ++ + AI ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAISNSL 326
>gi|228935065|ref|ZP_04097895.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824635|gb|EEM70437.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 647
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|222097214|ref|YP_002531271.1| DNA mismatch repair protein [Bacillus cereus Q1]
gi|254766159|sp|B9IV58.1|MUTL_BACCQ RecName: Full=DNA mismatch repair protein MutL
gi|221241272|gb|ACM13982.1| DNA mismatch repair protein MutL [Bacillus cereus Q1]
Length = 647
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|118478989|ref|YP_896140.1| DNA mismatch repair protein [Bacillus thuringiensis str. Al Hakam]
gi|166231104|sp|A0RHE0.1|MUTL_BACAH RecName: Full=DNA mismatch repair protein MutL
gi|118418214|gb|ABK86633.1| DNA mismatch repair protein MutL [Bacillus thuringiensis str. Al
Hakam]
Length = 647
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|418975629|ref|ZP_13523533.1| DNA mismatch repair protein [Streptococcus oralis SK1074]
gi|383347612|gb|EID25590.1| DNA mismatch repair protein [Streptococcus oralis SK1074]
Length = 649
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVSRGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSRPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|228940846|ref|ZP_04103406.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228973767|ref|ZP_04134344.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980322|ref|ZP_04140633.1| DNA mismatch repair protein mutL [Bacillus thuringiensis Bt407]
gi|384187772|ref|YP_005573668.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676089|ref|YP_006928460.1| DNA mismatch repair protein MutL [Bacillus thuringiensis Bt407]
gi|452200150|ref|YP_007480231.1| DNA mismatch repair protein MutL [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228779427|gb|EEM27683.1| DNA mismatch repair protein mutL [Bacillus thuringiensis Bt407]
gi|228785919|gb|EEM33921.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818860|gb|EEM64925.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326941481|gb|AEA17377.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409175218|gb|AFV19523.1| DNA mismatch repair protein MutL [Bacillus thuringiensis Bt407]
gi|452105543|gb|AGG02483.1| DNA mismatch repair protein MutL [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 647
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|196044440|ref|ZP_03111675.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB108]
gi|225865749|ref|YP_002751127.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB102]
gi|376267661|ref|YP_005120373.1| DNA mismatch repair protein MutL [Bacillus cereus F837/76]
gi|254766158|sp|C1ENZ2.1|MUTL_BACC3 RecName: Full=DNA mismatch repair protein MutL
gi|196024475|gb|EDX63147.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB108]
gi|225787379|gb|ACO27596.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB102]
gi|364513461|gb|AEW56860.1| DNA mismatch repair protein MutL [Bacillus cereus F837/76]
Length = 647
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|289168758|ref|YP_003447027.1| DNA mismatch repair protein hexB [Streptococcus mitis B6]
gi|288908325|emb|CBJ23167.1| DNA mismatch repair protein hexB [Streptococcus mitis B6]
Length = 649
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 200/436 (45%), Gaps = 43/436 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EI+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKD 417
+ D LE+ +R + Q+ L + L + E R + E
Sbjct: 330 -TLIPDALENLAKSTVRNREKVEQTILPLKENTL--------YYEQTEANRSSQAEVADY 380
Query: 418 PVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 381 QVELTDEGQDLTLFAK 396
>gi|229018964|ref|ZP_04175806.1| DNA mismatch repair protein mutL [Bacillus cereus AH1273]
gi|229025207|ref|ZP_04181631.1| DNA mismatch repair protein mutL [Bacillus cereus AH1272]
gi|228736140|gb|EEL86711.1| DNA mismatch repair protein mutL [Bacillus cereus AH1272]
gi|228742292|gb|EEL92450.1| DNA mismatch repair protein mutL [Bacillus cereus AH1273]
Length = 647
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLMIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>gi|228954045|ref|ZP_04116074.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229071265|ref|ZP_04204489.1| DNA mismatch repair protein mutL [Bacillus cereus F65185]
gi|229081020|ref|ZP_04213533.1| DNA mismatch repair protein mutL [Bacillus cereus Rock4-2]
gi|423425906|ref|ZP_17402937.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3X2-2]
gi|423437223|ref|ZP_17414204.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4X12-1]
gi|423503553|ref|ZP_17480145.1| DNA mismatch repair protein mutL [Bacillus cereus HD73]
gi|449090712|ref|YP_007423153.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228702334|gb|EEL54807.1| DNA mismatch repair protein mutL [Bacillus cereus Rock4-2]
gi|228711886|gb|EEL63837.1| DNA mismatch repair protein mutL [Bacillus cereus F65185]
gi|228805611|gb|EEM52201.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|401110653|gb|EJQ18552.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3X2-2]
gi|401120378|gb|EJQ28174.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4X12-1]
gi|402458907|gb|EJV90647.1| DNA mismatch repair protein mutL [Bacillus cereus HD73]
gi|449024469|gb|AGE79632.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 647
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|423374435|ref|ZP_17351773.1| DNA mismatch repair protein mutL [Bacillus cereus AND1407]
gi|401094347|gb|EJQ02429.1| DNA mismatch repair protein mutL [Bacillus cereus AND1407]
Length = 647
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|116627019|ref|YP_819638.1| DNA mismatch repair protein [Streptococcus thermophilus LMD-9]
gi|122268376|sp|Q03MY0.1|MUTL_STRTD RecName: Full=DNA mismatch repair protein MutL
gi|116100296|gb|ABJ65442.1| DNA mismatch repair protein MutL [Streptococcus thermophilus LMD-9]
Length = 647
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 199/403 (49%), Gaps = 56/403 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V G+ +++
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSK--IQIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G G+++ + + RHA TSK+ + D+ I T GFRGEAL SI+ +S L I+T
Sbjct: 59 DNGEGMAQADVAMSLRRHA-TSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKK 172
A G G + V KG + E +D VGT + +LFYN P R KYM+S +
Sbjct: 115 ADGEVYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAE 167
Query: 173 VLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDE 231
+ H V V R++L HP+V+F ++ + L S + L I+ +G+ + E
Sbjct: 168 LAHIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVE 223
Query: 232 VNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 291
++ +D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 224 ISNSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD------- 270
Query: 292 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
G+ G + P +++++ L D+ P K V + ++A I+ AI +
Sbjct: 271 --GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALIKSAIAQSL 326
Query: 352 MKKIAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 392
++ D++ DA L S+R + T L PLK
Sbjct: 327 REQ--------DLIPDALENLAKSSTRGATRSVQTSL---PLK 358
>gi|229104332|ref|ZP_04235001.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-28]
gi|228679030|gb|EEL33238.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-28]
Length = 647
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDVIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|402556109|ref|YP_006597380.1| DNA mismatch repair protein [Bacillus cereus FRI-35]
gi|401797319|gb|AFQ11178.1| DNA mismatch repair protein [Bacillus cereus FRI-35]
Length = 647
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229186007|ref|ZP_04313177.1| DNA mismatch repair protein mutL [Bacillus cereus BGSC 6E1]
gi|228597426|gb|EEK55076.1| DNA mismatch repair protein mutL [Bacillus cereus BGSC 6E1]
Length = 647
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|390955216|ref|YP_006418974.1| DNA mismatch repair protein MutL [Aequorivita sublithincola DSM
14238]
gi|390421202|gb|AFL81959.1| DNA mismatch repair protein MutL [Aequorivita sublithincola DSM
14238]
Length = 614
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 209/448 (46%), Gaps = 32/448 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DA AT + V V+V D+GSG
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAKATSITLVIKDAGKTLVQVTDNGSG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSVTDARLSFERHA-TSKI---KSAEDLFNLHTKGFRGEALASIAAIAHVELKTKTENSE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++GSK + D GTT+ ++LFYN P RR +++S+P + H + +
Sbjct: 121 IGTHLTIEGSKV--ISQDPAVVPKGTTISVKNLFYNIPARRNFLKSNPVETRHIIDEF-H 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP V+F+ + S+ + SS+ +++ FG + L V+ L+I
Sbjct: 178 RVALAHPSVAFQMLHNGSD---VFNLPSSNSRQRIVNIFGSKTNEKLVPVSEETEILKIE 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + Q+ ++N R++ K P L+H AS A G + K
Sbjct: 235 GFVLKPEFGKKSRGEQFFFVNDRFI-KSP---YLHHAVAS--------AFEGLV-----K 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
S P Y L L D+ P KT + F D + A + ++ + + D
Sbjct: 278 SDIHPGYFLFLEVDTHSIDINIHPTKTEIKFDDEHSIYAMLRATVKHSLGQFNIAPVLDF 337
Query: 363 DMLEDAELPLESSRFQSHQSSTHLHS--SPLKNLAKQRDHMFHKECERITFQEFQKDPVE 420
+ + + P E S+ Q S + S +P K +KQ + F + E T ++ V
Sbjct: 338 ERDKGFDTPYEYSKKQPTSPSIEVDSDFNPFKEKSKQGNINFPFKRENTT--SWESLYVG 395
Query: 421 LAEENTEMEFFSQPKHSSSLLDGSFAEC 448
L +ENT + + S + GS E
Sbjct: 396 LKDENTVVSNIGDIEFESEEVTGSLFES 423
>gi|423458049|ref|ZP_17434846.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5X2-1]
gi|401148433|gb|EJQ55926.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5X2-1]
Length = 647
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLMIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>gi|229151969|ref|ZP_04280165.1| DNA mismatch repair protein mutL [Bacillus cereus m1550]
gi|228631524|gb|EEK88157.1| DNA mismatch repair protein mutL [Bacillus cereus m1550]
Length = 647
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|42782852|ref|NP_980099.1| DNA mismatch repair protein [Bacillus cereus ATCC 10987]
gi|81830999|sp|Q732V8.1|MUTL_BACC1 RecName: Full=DNA mismatch repair protein MutL
gi|42738779|gb|AAS42707.1| DNA mismatch repair protein MutL [Bacillus cereus ATCC 10987]
Length = 647
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|404485713|ref|ZP_11020910.1| DNA mismatch repair protein MutL [Barnesiella intestinihominis YIT
11860]
gi|404338401|gb|EJZ64848.1| DNA mismatch repair protein MutL [Barnesiella intestinihominis YIT
11860]
Length = 627
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 179/373 (47%), Gaps = 36/373 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N+VDAGAT + + ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAVDAGATSIQIILKDAGRTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH +TSK + DD + T GFRGEALASI+ +S +E+ T+
Sbjct: 65 MSPTDARLAFERH-STSK---IRSADDLFSLRTMGFRGEALASIAAISQVELRTRRVDDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G M S+C G + VG+ +++F+N P RRK+++S+ + L ++
Sbjct: 121 VGTCIRMSASQC--EGQEAISTPVGSNFAVKNIFFNVPARRKFLKSNQVE-LSNILNEFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL++ ++SF + +SE L +++ +++ FG L + ++IS
Sbjct: 178 RMALINTQISFILVHNDSE---LYNLPATNLRQRIVALFGKSLNQQLLSLGTETSLVKIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLN----HLAASFDCSDSWKANNGFLKG 298
GY+ P + A QY ++N RY+ HK + HL +
Sbjct: 235 GYVGRPEAARKRGALQYFFVNGRYMRHPYFHKAVTICYEHLIPVGE-------------- 280
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
P Y +NL D+ P KT + F++ +P+ + +++ A K
Sbjct: 281 -------MPNYFINLTVDPETIDVNIHPTKTEIKFENEQPIWQILSASVKEALGKFSTAP 333
Query: 359 SFDVDMLEDAELP 371
S D DM + E+P
Sbjct: 334 SIDFDMEDAPEIP 346
>gi|386085766|ref|YP_006001640.1| DNA mismatch repair protein mutL [Streptococcus thermophilus ND03]
gi|386343658|ref|YP_006039822.1| DNA mismatch repair protein [Streptococcus thermophilus JIM 8232]
gi|387908861|ref|YP_006339167.1| DNA mismatch repair protein mutL [Streptococcus thermophilus
MN-ZLW-002]
gi|312277479|gb|ADQ62136.1| DNA mismatch repair protein mutL [Streptococcus thermophilus ND03]
gi|339277119|emb|CCC18867.1| DNA mismatch repair protein [Streptococcus thermophilus JIM 8232]
gi|387573796|gb|AFJ82502.1| DNA mismatch repair protein mutL [Streptococcus thermophilus
MN-ZLW-002]
Length = 647
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 199/403 (49%), Gaps = 56/403 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V G+ +++
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSK--IQIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G G+++ + + RHA TSK+ + D+ I T GFRGEAL SI+ +S L I+T
Sbjct: 59 DNGEGMAQADVAMSLRRHA-TSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKK 172
A G G + V KG + E +D VGT + +LFYN P R KYM+S +
Sbjct: 115 ADGEVYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAE 167
Query: 173 VLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDE 231
+ H V V R++L HP+V+F ++ + L S + L I+ +G+ + E
Sbjct: 168 LAHIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVE 223
Query: 232 VNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 291
++ +D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 224 ISNSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD------- 270
Query: 292 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
G+ G + P +++++ L D+ P K V + ++A I+ AI +
Sbjct: 271 --GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALIKSAIAQSL 326
Query: 352 MKKIAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 392
++ D++ DA L S+R + T L PLK
Sbjct: 327 REQ--------DLIPDALENLAKSSTRGATRSVQTSL---PLK 358
>gi|229098237|ref|ZP_04229184.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-29]
gi|229117254|ref|ZP_04246632.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-3]
gi|423378446|ref|ZP_17355730.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1O-2]
gi|423441502|ref|ZP_17418408.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4X2-1]
gi|423448272|ref|ZP_17425151.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5O-1]
gi|423464576|ref|ZP_17441344.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6O-1]
gi|423533918|ref|ZP_17510336.1| DNA mismatch repair protein mutL [Bacillus cereus HuB2-9]
gi|423540813|ref|ZP_17517204.1| DNA mismatch repair protein mutL [Bacillus cereus HuB4-10]
gi|423547052|ref|ZP_17523410.1| DNA mismatch repair protein mutL [Bacillus cereus HuB5-5]
gi|423623157|ref|ZP_17598935.1| DNA mismatch repair protein mutL [Bacillus cereus VD148]
gi|228666154|gb|EEL21618.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-3]
gi|228685135|gb|EEL39066.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-29]
gi|401128866|gb|EJQ36549.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5O-1]
gi|401172001|gb|EJQ79222.1| DNA mismatch repair protein mutL [Bacillus cereus HuB4-10]
gi|401178773|gb|EJQ85946.1| DNA mismatch repair protein mutL [Bacillus cereus HuB5-5]
gi|401259930|gb|EJR66104.1| DNA mismatch repair protein mutL [Bacillus cereus VD148]
gi|401635213|gb|EJS52969.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1O-2]
gi|402418163|gb|EJV50463.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4X2-1]
gi|402420843|gb|EJV53114.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6O-1]
gi|402464137|gb|EJV95837.1| DNA mismatch repair protein mutL [Bacillus cereus HuB2-9]
Length = 647
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|228922483|ref|ZP_04085785.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423581979|ref|ZP_17558090.1| DNA mismatch repair protein mutL [Bacillus cereus VD014]
gi|423635459|ref|ZP_17611112.1| DNA mismatch repair protein mutL [Bacillus cereus VD156]
gi|228837197|gb|EEM82536.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401212858|gb|EJR19599.1| DNA mismatch repair protein mutL [Bacillus cereus VD014]
gi|401278210|gb|EJR84146.1| DNA mismatch repair protein mutL [Bacillus cereus VD156]
Length = 647
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229061371|ref|ZP_04198717.1| DNA mismatch repair protein mutL [Bacillus cereus AH603]
gi|228717910|gb|EEL69556.1| DNA mismatch repair protein mutL [Bacillus cereus AH603]
Length = 647
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIRQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|423389971|ref|ZP_17367197.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1X1-3]
gi|401640887|gb|EJS58613.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1X1-3]
Length = 647
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLMIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>gi|229180045|ref|ZP_04307389.1| DNA mismatch repair protein mutL [Bacillus cereus 172560W]
gi|228603254|gb|EEK60731.1| DNA mismatch repair protein mutL [Bacillus cereus 172560W]
Length = 647
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|55820157|ref|YP_138599.1| DNA mismatch repair protein [Streptococcus thermophilus LMG 18311]
gi|55822045|ref|YP_140486.1| DNA mismatch repair protein [Streptococcus thermophilus CNRZ1066]
gi|81559962|sp|Q5M1Y6.1|MUTL_STRT1 RecName: Full=DNA mismatch repair protein MutL
gi|81561138|sp|Q5M6H7.1|MUTL_STRT2 RecName: Full=DNA mismatch repair protein MutL
gi|55736142|gb|AAV59784.1| DNA mismatch repair protein [Streptococcus thermophilus LMG 18311]
gi|55738030|gb|AAV61671.1| DNA mismatch repair protein [Streptococcus thermophilus CNRZ1066]
Length = 647
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 199/403 (49%), Gaps = 56/403 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V G+ +++
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSK--IQIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G G+++ + + RHA TSK+ + D+ I T GFRGEAL SI+ +S L I+T
Sbjct: 59 DNGEGMAQADVAMSLRRHA-TSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKK 172
A G G + V KG + E +D VGT + +LFYN P R KYM+S +
Sbjct: 115 ADGEVYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAE 167
Query: 173 VLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDE 231
+ H V V R++L HP+V+F ++ + L S + L I+ +G+ + E
Sbjct: 168 LAHIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVE 223
Query: 232 VNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 291
++ +D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 224 ISNSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD------- 270
Query: 292 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
G+ G + P +++++ L D+ P K V + ++A I+ AI +
Sbjct: 271 --GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALIKSAIAQSL 326
Query: 352 MKKIAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 392
++ D++ DA L S+R + T L PLK
Sbjct: 327 REQ--------DLIPDALENLAKSSTRGATRSVQTSL---PLK 358
>gi|423483359|ref|ZP_17460049.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6X1-2]
gi|401140910|gb|EJQ48465.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6X1-2]
Length = 647
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L + + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNYTLMKAVQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE+ ++ A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLQLIEKTLQDAFKK 327
>gi|417923461|ref|ZP_12566925.1| DNA mismatch repair protein [Streptococcus mitis SK569]
gi|342836846|gb|EGU71050.1| DNA mismatch repair protein [Streptococcus mitis SK569]
Length = 649
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 168/350 (48%), Gaps = 31/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGITHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
SK P ++++ L D+ P K V + ++ + AI
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAI 322
>gi|229031398|ref|ZP_04187399.1| DNA mismatch repair protein mutL [Bacillus cereus AH1271]
gi|228729893|gb|EEL80872.1| DNA mismatch repair protein mutL [Bacillus cereus AH1271]
Length = 647
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|421208064|ref|ZP_15665089.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070005]
gi|421219426|ref|ZP_15676288.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070425]
gi|421224058|ref|ZP_15680804.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070768]
gi|421297639|ref|ZP_15748335.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA60080]
gi|395576534|gb|EJG37088.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070005]
gi|395591226|gb|EJG51522.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070425]
gi|395591394|gb|EJG51689.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070768]
gi|395905010|gb|EJH15919.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA60080]
Length = 649
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GIS D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GYGISHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|407706173|ref|YP_006829758.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Bacillus
thuringiensis MC28]
gi|407383858|gb|AFU14359.1| DNA mismatch repair protein mutL [Bacillus thuringiensis MC28]
Length = 647
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|419767605|ref|ZP_14293755.1| DNA mismatch repair protein, C-terminal domain / MutL C-terminal
dimerization domain multi-domain protein [Streptococcus
mitis SK579]
gi|383352969|gb|EID30599.1| DNA mismatch repair protein, C-terminal domain / MutL C-terminal
dimerization domain multi-domain protein [Streptococcus
mitis SK579]
Length = 649
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 168/350 (48%), Gaps = 31/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EI+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
SK P ++++ L D+ P K V + ++ + AI
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAI 322
>gi|423418323|ref|ZP_17395412.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3X2-1]
gi|401106596|gb|EJQ14557.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3X2-1]
Length = 647
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLMIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>gi|167635859|ref|ZP_02394168.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0442]
gi|170687873|ref|ZP_02879087.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0465]
gi|254683523|ref|ZP_05147383.1| DNA mismatch repair protein [Bacillus anthracis str. CNEVA-9066]
gi|254722044|ref|ZP_05183833.1| DNA mismatch repair protein [Bacillus anthracis str. A1055]
gi|254739666|ref|ZP_05197360.1| DNA mismatch repair protein [Bacillus anthracis str. Kruger B]
gi|421639523|ref|ZP_16080114.1| DNA mismatch repair protein [Bacillus anthracis str. BF1]
gi|167528816|gb|EDR91574.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0442]
gi|170668189|gb|EDT18938.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0465]
gi|403393188|gb|EJY90433.1| DNA mismatch repair protein [Bacillus anthracis str. BF1]
Length = 627
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|30263774|ref|NP_846151.1| DNA mismatch repair protein [Bacillus anthracis str. Ames]
gi|47529193|ref|YP_020542.1| DNA mismatch repair protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186618|ref|YP_029870.1| DNA mismatch repair protein [Bacillus anthracis str. Sterne]
gi|65321094|ref|ZP_00394053.1| COG0323: DNA mismatch repair enzyme (predicted ATPase) [Bacillus
anthracis str. A2012]
gi|165872424|ref|ZP_02217059.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0488]
gi|167639830|ref|ZP_02398099.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0193]
gi|170706899|ref|ZP_02897357.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0389]
gi|177652043|ref|ZP_02934589.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0174]
gi|190568430|ref|ZP_03021337.1| DNA mismatch repair protein MutL [Bacillus anthracis str.
Tsiankovskii-I]
gi|227813324|ref|YP_002813333.1| DNA mismatch repair protein [Bacillus anthracis str. CDC 684]
gi|229604532|ref|YP_002868010.1| DNA mismatch repair protein [Bacillus anthracis str. A0248]
gi|254735808|ref|ZP_05193514.1| DNA mismatch repair protein [Bacillus anthracis str. Western North
America USA6153]
gi|254751062|ref|ZP_05203101.1| DNA mismatch repair protein [Bacillus anthracis str. Vollum]
gi|254759380|ref|ZP_05211405.1| DNA mismatch repair protein [Bacillus anthracis str. Australia 94]
gi|386737591|ref|YP_006210772.1| DNA mismatch repair protein mutL [Bacillus anthracis str. H9401]
gi|81837840|sp|Q81WR4.1|MUTL_BACAN RecName: Full=DNA mismatch repair protein MutL
gi|254766156|sp|C3P5H4.1|MUTL_BACAA RecName: Full=DNA mismatch repair protein MutL
gi|254766157|sp|C3L823.1|MUTL_BACAC RecName: Full=DNA mismatch repair protein MutL
gi|30258418|gb|AAP27637.1| DNA mismatch repair protein MutL [Bacillus anthracis str. Ames]
gi|47504341|gb|AAT33017.1| DNA mismatch repair protein MutL [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180545|gb|AAT55921.1| DNA mismatch repair protein MutL [Bacillus anthracis str. Sterne]
gi|164711862|gb|EDR17404.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0488]
gi|167512231|gb|EDR87608.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0193]
gi|170128317|gb|EDS97186.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0389]
gi|172082412|gb|EDT67477.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0174]
gi|190560434|gb|EDV14412.1| DNA mismatch repair protein MutL [Bacillus anthracis str.
Tsiankovskii-I]
gi|227007230|gb|ACP16973.1| DNA mismatch repair protein MutL [Bacillus anthracis str. CDC 684]
gi|229268940|gb|ACQ50577.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0248]
gi|384387443|gb|AFH85104.1| DNA mismatch repair protein mutL [Bacillus anthracis str. H9401]
Length = 626
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|418087979|ref|ZP_12725144.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47033]
gi|418201491|ref|ZP_12837923.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA52306]
gi|419454599|ref|ZP_13994562.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP04]
gi|421284758|ref|ZP_15735536.1| DNA mismatch repair protein mutL 3 [Streptococcus pneumoniae
GA60190]
gi|133950292|gb|ABO44018.1| MutL [Streptococcus pneumoniae]
gi|353755656|gb|EHD36259.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47033]
gi|353868967|gb|EHE48850.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA52306]
gi|379631040|gb|EHZ95620.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP04]
gi|395888678|gb|EJG99689.1| DNA mismatch repair protein mutL 3 [Streptococcus pneumoniae
GA60190]
Length = 649
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|307126400|ref|YP_003878431.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae 670-6B]
gi|418111522|ref|ZP_12748527.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41538]
gi|418131589|ref|ZP_12768466.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11304]
gi|418154231|ref|ZP_12790962.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16242]
gi|418224634|ref|ZP_12851264.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP112]
gi|419465827|ref|ZP_14005713.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05248]
gi|419476838|ref|ZP_14016664.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA18068]
gi|419511633|ref|ZP_14051267.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05578]
gi|419515903|ref|ZP_14055521.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02506]
gi|421282420|ref|ZP_15733210.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA04216]
gi|133950174|gb|ABO44014.1| MutL [Streptococcus pneumoniae]
gi|183393274|gb|ACC61797.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|306483462|gb|ADM90331.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae 670-6B]
gi|353786579|gb|EHD66990.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41538]
gi|353809057|gb|EHD89319.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11304]
gi|353822523|gb|EHE02698.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16242]
gi|353883278|gb|EHE63086.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP112]
gi|379547399|gb|EHZ12536.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05248]
gi|379567637|gb|EHZ32620.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA18068]
gi|379636103|gb|EIA00661.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05578]
gi|379639906|gb|EIA04445.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02506]
gi|395884390|gb|EJG95428.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA04216]
Length = 649
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|319940113|ref|ZP_08014467.1| DNA mismatch repair protein mutL [Streptococcus anginosus 1_2_62CV]
gi|319810827|gb|EFW07154.1| DNA mismatch repair protein mutL [Streptococcus anginosus 1_2_62CV]
Length = 648
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 170/354 (48%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 1 MSKIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLRSIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEAL SI+ VS L I T
Sbjct: 61 GEGIEHEEVSLALRRH-ATSKIKKQADL---FRIRTLGFRGEALPSIASVSRLTIETATS 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G + +G + L + GT + DLF+N P R KYM+S ++ H V
Sbjct: 117 SGAHGTLLIAQGGEVETL--EPSSCPRGTKIKVEDLFFNTPARLKYMKSQQAELSHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP+V+F ++ E+ T + + + +G+ + E+ A+D
Sbjct: 174 VINRLSLAHPEVAFTLVN--DGKEMTRTAGTGNLRQAIAGIYGLTTAKKMIEILASDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P ++++R L D+ P K V ++ I +AI ++
Sbjct: 273 GSKLMVGRFPIAVIDIRIDPYLADVNVHPTKQEVRISKERELMVLISQAIAASL 326
>gi|417916550|ref|ZP_12560127.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus mitis bv. 2 str. SK95]
gi|342829441|gb|EGU63795.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus mitis bv. 2 str. SK95]
Length = 649
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 205/438 (46%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSTLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEIIPATSPVGTKVCVADLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + + +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIAIGNSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E + + E
Sbjct: 330 -ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSKPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL EE ++ F++
Sbjct: 379 DHQVELTEEGRDLTLFAK 396
>gi|417675960|ref|ZP_12325373.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17545]
gi|332076625|gb|EGI87087.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17545]
Length = 649
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 168/350 (48%), Gaps = 31/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
SK P ++++ L D+ P K V + ++ + AI
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAI 322
>gi|423522401|ref|ZP_17498874.1| DNA mismatch repair protein mutL [Bacillus cereus HuA4-10]
gi|401175095|gb|EJQ82298.1| DNA mismatch repair protein mutL [Bacillus cereus HuA4-10]
Length = 647
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIRQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|257876211|ref|ZP_05655864.1| DNA mismatch repair protein [Enterococcus casseliflavus EC20]
gi|257810377|gb|EEV39197.1| DNA mismatch repair protein [Enterococcus casseliflavus EC20]
Length = 702
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 170/354 (48%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I L E + N + +G V+ VV+ELV N+VDAG+T++ +++ ++V+D+
Sbjct: 1 MGKIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ +RH ATSK + + DD I T GFRGEAL SI+ VS+L I T
Sbjct: 61 GEGIAEEDVLTAFKRH-ATSK---IHNRDDLFRIRTLGFRGEALPSIASVSILSIETAVK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G +KG + R+ GT + +LFYN P R KY+++ + L ++
Sbjct: 117 GAQQGSFVRLKGGAVEEHLPANLRQ--GTKITVENLFYNTPARLKYVKTLQTE-LANIGD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIAL HP+V+F+ + +++L T S + +G+E + ++ D
Sbjct: 174 IVNRIALSHPEVAFRLV--HEGNKMLSTTGSGQLKQTIAGIYGVETAKKMIAIDTEDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+++G++S P + + + + IN RY+ ++ N + G
Sbjct: 232 KVTGFVSLPEVTRASRNYLSTIINGRYI-------------------RNFALNKAIVAGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P +L ++ L D+ P K V E + I +AI A
Sbjct: 273 GSKLMVGRFPLAVLEIKMDPLLVDVNVHPTKQEVRLSKEEELTKLISKAINEAL 326
>gi|47568272|ref|ZP_00238975.1| DNA mismatch repair protein HexB [Bacillus cereus G9241]
gi|47555100|gb|EAL13448.1| DNA mismatch repair protein HexB [Bacillus cereus G9241]
Length = 647
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 172/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE ++ A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQGAFKK 327
>gi|423558668|ref|ZP_17534970.1| DNA mismatch repair protein mutL [Bacillus cereus MC67]
gi|401191936|gb|EJQ98958.1| DNA mismatch repair protein mutL [Bacillus cereus MC67]
Length = 647
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 172/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIRQEKTASRK--GTNITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE ++ A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQDAFKK 327
>gi|325567291|ref|ZP_08143958.1| DNA mismatch repair protein HexB [Enterococcus casseliflavus ATCC
12755]
gi|325158724|gb|EGC70870.1| DNA mismatch repair protein HexB [Enterococcus casseliflavus ATCC
12755]
Length = 702
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 170/354 (48%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I L E + N + +G V+ VV+ELV N+VDAG+T++ +++ ++V+D+
Sbjct: 1 MGKIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ +RH ATSK + + DD I T GFRGEAL SI+ VS+L I T
Sbjct: 61 GEGIAEEDVLTAFKRH-ATSK---IHNRDDLFRIRTLGFRGEALPSIASVSILSIETAVK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G +KG + R+ GT + +LFYN P R KY+++ + L ++
Sbjct: 117 GAQQGSFVRLKGGAVEEHLPANLRQ--GTKITVENLFYNTPARLKYVKTLQTE-LANIGD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIAL HP+V+F+ + +++L T S + +G+E + ++ D
Sbjct: 174 IVNRIALSHPEVAFRLV--HEGNKMLSTTGSGQLKQTIAGIYGVETAKKMIAIDTEDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+++G++S P + + + + IN RY+ ++ N + G
Sbjct: 232 KVTGFVSLPEVTRASRNYLSTIINGRYI-------------------RNFALNKAIVAGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P +L ++ L D+ P K V E + I +AI A
Sbjct: 273 GSKLMVGRFPLAVLEIKMDPLLVDVNVHPTKQEVRLSKEEELTKLISKAINEAL 326
>gi|333374997|ref|ZP_08466826.1| DNA mismatch repair protein MutL [Kingella kingae ATCC 23330]
gi|381400681|ref|ZP_09925604.1| DNA mismatch repair protein [Kingella kingae PYKK081]
gi|332973074|gb|EGK11011.1| DNA mismatch repair protein MutL [Kingella kingae ATCC 23330]
gi|380834317|gb|EIC14162.1| DNA mismatch repair protein [Kingella kingae PYKK081]
Length = 624
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 178/340 (52%), Gaps = 28/340 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M +I +LP+ + N + +G V+ ++E++ NS+DAGAT++ + + G ++V D+
Sbjct: 1 MSSIIQLPDHLINQIAAGEVVERPANALKEILENSLDAGATQIQIDIAGGGIKLIRVCDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI + L L RHA TSK+ L+D++ + + GFRGE LAS++ VS L + ++
Sbjct: 61 GSGIDAESLPLALSRHA-TSKIKTLSDLER---VRSMGFRGEGLASVASVSRLTLTSRPA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ + + +K ++ + VGTTV +LF+N P RRK+++S + H +
Sbjct: 117 TQAHAAQ--IKAEDGVFQPVSAASHPVGTTVEVAELFFNTPARRKFLKSESTEYAHCLT- 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL +P V+F +++ D+L+ + SP + G E + V++ +GAL
Sbjct: 174 MVERLALANPNVAFT---LKNNDKLIFAYPAQSPEQRVAQILGAEFHAASLPVSSENGAL 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+++G++S P + QY ++N R+V K++ H +A L
Sbjct: 231 QLNGFVSKPTFAKGKSDTQYFFVNQRFVRD----KVMLHAV--------KQAYRDVL--- 275
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV 339
+Q PA+ L L SL D+ P KT + F+D + V
Sbjct: 276 --HNQITPAFALFLTIDPSLVDVNIHPTKTEIRFRDSQAV 313
Score = 47.0 bits (110), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 39/193 (20%)
Query: 1186 LAVIDQHAADERIRLEELR--HKVLSGEGKSV------AYLDAEQELVLPEIGYQLLQNF 1237
L ++D HAA ERI E+L+ H + + + A AEQ V F
Sbjct: 454 LILVDMHAAAERINYEKLKTAHHANGIQAQMLLIPVVFAATHAEQAAV---------DEF 504
Query: 1238 AEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL--EFLQ 1295
+ ++++G L+L+ + I + VP + + SDV L E L+
Sbjct: 505 SHSLREYG----------------LDLVNAETGKIAVRTVPNML--SKSDVATLAREVLR 546
Query: 1296 QLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1355
L T S T +L++ AC G++ G L E ++ +++Q QC HGRP
Sbjct: 547 DLMATGQSPTVRDRENEILSTMACHGSVRAGRQLTLPEMNALLRDMEQFPRSNQCNHGRP 606
Query: 1356 T--TVPLVNLEAL 1366
T + L +L+AL
Sbjct: 607 TWVKIGLDDLDAL 619
>gi|331091140|ref|ZP_08339982.1| hypothetical protein HMPREF9477_00625 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405362|gb|EGG84898.1| hypothetical protein HMPREF9477_00625 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 638
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 175/358 (48%), Gaps = 35/358 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ +V+ELV N++DA AT V V + ++++ D+
Sbjct: 1 MPNIQVLDQITIDKIAAGEVIERPASIVKELVENAIDANATAVTVEIKEGGISFIRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI ++ + L RH+ TSK+ D+ + + GFRGEAL+SIS ++ +E+ITK
Sbjct: 61 GCGIPKEEVSLAFLRHS-TSKIRSEKDL---ATVSSLGFRGEALSSISAIAQVEVITKTK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVG----TTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
G + ++G G++ ++VG TT + +FYN P RRK++++ + H
Sbjct: 117 ENDFGVKYTIEG------GVEKSIEEVGAPDGTTFLVHQIFYNTPARRKFLKTPMTEASH 170
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
V + ++R+AL HP+VS +FI+ + L T + ++ FG E + L EVN +
Sbjct: 171 -VNELMVRLALSHPEVSIQFIN--NGQSKLHTAGNGKVKDVIYHVFGREIANNLLEVNRD 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+G + +SGYI P S + ++ YIN RYV I K + F +
Sbjct: 228 EGKMRVSGYIGKPLISRGNRNYENYYINGRYVKSNIIAKAIEDAYKDFTMQHKY------ 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
P +L+ + D+ P K + F + V F+ RA++ ++
Sbjct: 282 -----------PFTVLHFWLDGNDIDVNVHPTKMELRFSHRQEVYDFVYRAVKETLIE 328
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 35/221 (15%)
Query: 1153 FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEG 1212
FF + K +++ K++ QV + V L +IDQHAA ER+ E+ H +
Sbjct: 435 FFEEKLLTKKAVQEYKLIGQVFDTYWLVEFQEQLYIIDQHAAHERVLYEKTLHGMKD--- 491
Query: 1213 KSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVI 1272
+ F Q I N+ Q +R ++++L + I
Sbjct: 492 ----------------------RTFTSQYLSPPIILNLSMQEARLLTEHMDLFSKIGFEI 529
Query: 1273 --------TLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAI 1323
+ AVP +F + ++ L+E L L+D S+ P + + + +C+ A+
Sbjct: 530 ENFGGDSFAVRAVPDNLFSIAKKEL-LMEMLDNLSDDITSAEAPDLIGEKIAAMSCKAAV 588
Query: 1324 MFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
L +E ++ EL + + C HGRPT + + E
Sbjct: 589 KGNAKLSSAEVNALIGELLELENPYHCPHGRPTIIAMTKRE 629
>gi|418967875|ref|ZP_13519509.1| DNA mismatch repair protein [Streptococcus mitis SK616]
gi|383342001|gb|EID20242.1| DNA mismatch repair protein [Streptococcus mitis SK616]
Length = 649
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 168/350 (48%), Gaps = 31/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EI+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
SK P ++++ L D+ P K V + ++ + AI
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAI 322
>gi|418161232|ref|ZP_12797923.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17328]
gi|353830822|gb|EHE10951.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17328]
Length = 649
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSRIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|420261474|ref|ZP_14764118.1| DNA mismatch repair protein HexB [Enterococcus sp. C1]
gi|394771408|gb|EJF51169.1| DNA mismatch repair protein HexB [Enterococcus sp. C1]
Length = 702
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 170/354 (48%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I L E + N + +G V+ VV+ELV N+VDAG+T++ +++ ++V+D+
Sbjct: 1 MGKIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ +RH ATSK + + DD I T GFRGEAL SI+ VS+L I T
Sbjct: 61 GEGIAEEDVLTAFKRH-ATSK---IHNRDDLFRIRTLGFRGEALPSIASVSILSIETAVK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G +KG + R+ GT + +LFYN P R KY+++ + L ++
Sbjct: 117 GAQQGSFVRLKGGAVEEHLPANLRQ--GTKITVENLFYNTPARLKYVKTLQTE-LANIGD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIAL HP+V+F+ + +++L T S + +G+E + ++ D
Sbjct: 174 IVNRIALSHPEVAFRLV--HEGNKMLSTTGSGQLKQTIAGIYGVETAKKMIAIDTEDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+++G++S P + + + + IN RY+ ++ N + G
Sbjct: 232 KVTGFVSLPEVTRASRNYLSTIINGRYI-------------------RNFALNKAIVAGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P +L ++ L D+ P K V E + I +AI A
Sbjct: 273 GSKLMVGRFPLAVLEVKMDPLLVDVNVHPTKQEVRLSKEEELTKLISKAINEAL 326
>gi|266623036|ref|ZP_06115971.1| DNA mismatch repair protein MutL [Clostridium hathewayi DSM 13479]
gi|288865200|gb|EFC97498.1| DNA mismatch repair protein MutL [Clostridium hathewayi DSM 13479]
Length = 662
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 174/359 (48%), Gaps = 35/359 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
M I L + N + +G V+ VV+EL+ N++DA AT V V + +++V D+
Sbjct: 1 MPNITLLDQNTINKIAAGEVIERPASVVKELLENAIDARATAVTVEIKEGGTTFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI R+ + L RH+ TSK+ + D+ I + GFRGEALASI+ V +E+ITK
Sbjct: 61 GCGIPREEVPLAFLRHS-TSKIKSVEDL---FTISSLGFRGEALASIAAVCQVELITKTS 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
G R ++G G++ +++ GTT ++R+LFYN P RRK++++ + H
Sbjct: 117 EALTGSRYQIEG------GMERPLEEIGAPEGTTFIARNLFYNTPARRKFLKTPMTEGSH 170
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
V + V +IAL HP++S +FI ++ L T + + ++ + FG E + L V A
Sbjct: 171 -VAELVEKIALSHPEISIRFI--QNNQNKLHTSGNHNLKDIIYTVFGREIAANLLAVEAK 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ ISG+I P + + ++ +IN RY+ I K + F +
Sbjct: 228 KQDISISGFIGKPVIARGNRNYENYFINGRYIRSSIISKAIEEAYKPFMMQHKY------ 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P +L+ L D+ P K + F+D E V + A+ A K
Sbjct: 282 -----------PFTMLHFTIEPELLDVNVHPTKMELRFRDGEMVYRMVYDAVSGALAHK 329
Score = 48.1 bits (113), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 20/198 (10%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
K++ QV + V L +IDQHAA E++ L E L S LD L L
Sbjct: 474 KLIGQVFDTYWLVEFNEQLYIIDQHAAHEKV-LYEKTMATLKNREYSSQMLDPPIILTLN 532
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLS 1286
LL+ + D G+ I G R + + VP + +
Sbjct: 533 MNEEVLLKEHMKYFSDMGF--EIEPFGGREY--------------AVRGVPANLLSIAKK 576
Query: 1287 DVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
D+ L+E + L+D D S+ P + + + +C+ A+ G+ L +E ++++L
Sbjct: 577 DL-LIEMIDGLSD-DVSTHNPDIIYDRVATMSCKAAVKGGNRLSAAEANELIDQLLNLEN 634
Query: 1347 CFQCAHGRPTTVPLVNLE 1364
+ C HGRPT + + E
Sbjct: 635 PYACPHGRPTIISMSKYE 652
>gi|229162703|ref|ZP_04290660.1| DNA mismatch repair protein mutL [Bacillus cereus R309803]
gi|228620585|gb|EEK77454.1| DNA mismatch repair protein mutL [Bacillus cereus R309803]
Length = 647
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLMIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|419781929|ref|ZP_14307740.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK610]
gi|383183570|gb|EIC76105.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK610]
Length = 649
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 169/354 (47%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + + +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIAIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P ++++ L D+ P K V ++A + AI ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAISNSL 326
>gi|421267412|ref|ZP_15718287.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR95]
gi|395872501|gb|EJG83599.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR95]
Length = 649
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|168699267|ref|ZP_02731544.1| DNA mismatch repair protein [Gemmata obscuriglobus UQM 2246]
Length = 731
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 190/404 (47%), Gaps = 41/404 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I +LP V N + +G V+ VV+EL+ NS+DAGAT++ + + ++VVDD
Sbjct: 1 MSRIRQLPPDVVNKIAAGEVIERPASVVKELLENSIDAGATRIDIDLDAGGTELIRVVDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI D L L +H ATSK L DD I T GFRGEALASIS V + + ++ H
Sbjct: 61 GCGIDPDDLALAFSQH-ATSK---LTTADDLFQIRTMGFRGEALASISGVGQITLQSRTH 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERK---DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G KC GI D R GT + R LFYN PVR+K+++S ++ H
Sbjct: 117 TAASGCE-----VKCDGNGISDPRPWNGAPGTRMEVRHLFYNVPVRKKFLKSVATELGH- 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGI-EDFSFLDEVNAN 235
V + V R+AL HP + I + + L+ S+ L I+ F E L E+++
Sbjct: 171 VCETVTRLALAHPAL---HITLRHNNRLVYDIPGSAGLLDRIALFFTGEVRDALYEIDSG 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
DG + + GYI+ P QY+++N R+ + S +S++ G
Sbjct: 228 DGPMRLRGYIADPKCDRGNSKLQYLFVNGRW---------FRDRSLSHALQESYR---GL 275
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK- 354
L R L L P D+ P K+ V F++ V + + I+ +K+
Sbjct: 276 LMAGRYT-----IGFLFLTLPPDKLDVNVHPTKSEVRFQENSLVYSLVRATIKQRLLKEN 330
Query: 355 -IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQ 397
I H + +ED L E + + L +SP + LA+Q
Sbjct: 331 LIPHLTVP-QGIEDGALAEEP---EPKIETPSLFTSPRRELAEQ 370
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
+ VIDQHA ERI E+LR ++ +G+ V L + + LP L+ A+ + + G
Sbjct: 562 MLVIDQHALHERILFEQLRRRIRAGQ-LEVQRLLIPEPVDLPAEQAALVLECADALAELG 620
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1305
+ F N I L + P + G V L + + + + T
Sbjct: 621 LDVS-------DFGGN---------TILLSSYPTLLGRKPPHVILRGVIDHIVTQERAPT 664
Query: 1306 TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEA 1365
+ ++ + AC+ A+ GD L P E ++ + C HGRPT++ L +
Sbjct: 665 KEALLHLLMATMACKAAVKAGDKLSPEEITYLLRLREMAEDSHHCPHGRPTSL-LFSRAE 723
Query: 1366 LHKQ 1369
L KQ
Sbjct: 724 LDKQ 727
>gi|163941456|ref|YP_001646340.1| DNA mismatch repair protein [Bacillus weihenstephanensis KBAB4]
gi|423518405|ref|ZP_17494886.1| DNA mismatch repair protein mutL [Bacillus cereus HuA2-4]
gi|229890121|sp|A9VS12.1|MUTL_BACWK RecName: Full=DNA mismatch repair protein MutL
gi|163863653|gb|ABY44712.1| DNA mismatch repair protein MutL [Bacillus weihenstephanensis
KBAB4]
gi|401161132|gb|EJQ68500.1| DNA mismatch repair protein mutL [Bacillus cereus HuA2-4]
Length = 644
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 172/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>gi|418142967|ref|ZP_12779770.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13494]
gi|353810710|gb|EHD90960.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13494]
Length = 649
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--GGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|417091704|ref|ZP_11956510.1| DNA mismatch repair protein MutL [Streptococcus suis R61]
gi|353533010|gb|EHC02678.1| DNA mismatch repair protein MutL [Streptococcus suis R61]
Length = 645
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 170/357 (47%), Gaps = 37/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RH ATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRH-ATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H
Sbjct: 117 DSAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 172 V-DVVNRLSLAHPEIAFALVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAED 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ISGY+S P + + + + ++IN RY+ ++ N L
Sbjct: 229 LDFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 270 EGYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|164688071|ref|ZP_02212099.1| hypothetical protein CLOBAR_01716 [Clostridium bartlettii DSM
16795]
gi|164602484|gb|EDQ95949.1| DNA mismatch repair domain protein [Clostridium bartlettii DSM
16795]
Length = 687
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 188/358 (52%), Gaps = 36/358 (10%)
Query: 1 MGT-INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVV 57
MG IN L + N + +G V+ + VV+EL+ N++D+GAT+V V + G C +K+
Sbjct: 1 MGKYINILDDLTINKIAAGEVVERPSSVVKELLENAIDSGATQVVVDITDGGKKC-IKIS 59
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI + RHA TSK+ + D+ D + + GFRGEALASIS VS +E++TK
Sbjct: 60 DNGEGILSSEVEKCFLRHA-TSKIKSIDDLFD---LYSLGFRGEALASISAVSNIEMVTK 115
Query: 118 AHGRPNGYRKVMKGSKCLY---LGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G + V+ GSK + +G D GTT+ +DLF+N PVR K+++S+ + +
Sbjct: 116 TKEEMIGTKIVLSGSKIIKKEPVGTKD-----GTTITVKDLFFNTPVRAKFLKSTHAETI 170
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
+ + + ++A+ +P V K+I+ + +L T + ++++ S +G E L EV+
Sbjct: 171 N-ISDLINKLAIGNPNVRLKYIN--NSKLMLNTPGDNKLISVIRSIYGKEITDNLIEVDY 227
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
D ++ISGYI + S K Q++YIN R+V I +N +S+K+
Sbjct: 228 EDEKIKISGYIGNNNIYRSNKNLQHIYINKRFVKSKVILDAIN---------ESYKSIIP 278
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
+K C LN++ S D+ P K V F+D + V I I++ +
Sbjct: 279 I-----NKFGVC---FLNIKINPSEIDVNIHPTKLEVKFQDEKEVYIKIRDVIKNKLL 328
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 90/215 (41%), Gaps = 38/215 (17%)
Query: 1166 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV 1225
D KV+ + +I + G ++ ++DQHAA E++ EE K +
Sbjct: 500 DFKVIGTILNTYIVLEKGTSMYLLDQHAAHEKVLYEEYMTKFKN---------------- 543
Query: 1226 LPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQR---QITV-----ITLLAV 1277
QN Q+ + + + KNLNL + +I + I + V
Sbjct: 544 ---------QNIDMQMLLDPIVIELSSVDMLDVEKNLNLFMKFGFEIEIFGDNHIMVRGV 594
Query: 1278 PCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALI 1337
P IFGV S+ + + + + D + S + + S +CR AI D + E +
Sbjct: 595 PNIFGVAQSEKFIFQIIDNIGDLESSYDLK---MDKIASMSCRAAIKANDKIHFDEINSL 651
Query: 1338 VEELKQTSLCFQCAHGRPTTVPLVN--LEALHKQI 1370
+ ++++ + C HGRP+ V + +E + K+I
Sbjct: 652 LSKMEKCENPYTCPHGRPSMVEISKKEIEKMFKRI 686
>gi|86158140|ref|YP_464925.1| DNA mismatch repair protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|123764022|sp|Q2IIL0.1|MUTL_ANADE RecName: Full=DNA mismatch repair protein MutL
gi|85774651|gb|ABC81488.1| DNA mismatch repair protein MutL [Anaeromyxobacter dehalogenans
2CP-C]
Length = 608
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 172/362 (47%), Gaps = 38/362 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I+ LP + N + +G V+ +V+ELV N++DAGAT + V V V+V DD
Sbjct: 1 MPRIHVLPPGLVNQIAAGEVVERPASIVKELVENALDAGATAIGVDVEEGGLALVRVADD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSG+ RD +L ERHA TSKL D + IGT GFRGEA+ +I+ VS + T
Sbjct: 61 GSGMDRDDALLALERHA-TSKL---RDAEGLAAIGTMGFRGEAVPAIASVSRFRLDTSPG 116
Query: 120 GRPNGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R ++G LG + + GTTV RDLF+N P RRK+M+++ + H V
Sbjct: 117 EDGAGTRVEIEGG---VLGEVAPVARPRGTTVEVRDLFFNTPARRKFMRAASTEAGH-VS 172
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDG 237
+ V+R+AL P V F + S L+ + LA + G E L V+A G
Sbjct: 173 EAVIRLALARPDVGFT---LRSGGRLVLGARAGGGLADRAGQALGREAHRHLLPVDARRG 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVC-KGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ + G I SP S + Y+++N RYV + H +L A +
Sbjct: 230 EVRVHGLICSPDHSEATGRALYLFVNGRYVRDRAAAHAVLRAFAGTLPPGRH-------- 281
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-W 351
PA +L + P D+ P K V F + ++ + + A+R+A W
Sbjct: 282 ----------PAGVLFVELPLDRVDVNVHPQKLEVRFAEGREVFDALFHTVAGALRTAPW 331
Query: 352 MK 353
++
Sbjct: 332 LR 333
Score = 47.8 bits (112), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 1183 GGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIK 1242
GGTL VIDQHA+ ER+ L+ + YL Q + LP + L+ ++
Sbjct: 436 GGTLVVIDQHASHERMLFHRLKEAFRARRIPVQPYL-LPQVVTLPPAAARALEAGLAELG 494
Query: 1243 DWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG 1302
G+ + G +F A + GV+L+ + L + QLAD +
Sbjct: 495 RLGF--DAEPFGGDAFAVK-------------GAPAALAGVDLTAL-LTDLGSQLADVER 538
Query: 1303 SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVN 1362
S + +L + AC A+ + P E +++ L +C HGRP L +
Sbjct: 539 GSAVDDAFHDLLATMACHAAVRANQDVSPEEARALLDGLDAIDFKARCPHGRPVVFEL-S 597
Query: 1363 LEALHKQIAQ 1372
L L +++ +
Sbjct: 598 LADLERRVGR 607
>gi|423395932|ref|ZP_17373133.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-1]
gi|423406807|ref|ZP_17383956.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-3]
gi|401653674|gb|EJS71218.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-1]
gi|401660097|gb|EJS77580.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-3]
Length = 647
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L + + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|419707080|ref|ZP_14234583.1| DNA mismatch repair protein mutL [Streptococcus salivarius PS4]
gi|383283165|gb|EIC81126.1| DNA mismatch repair protein mutL [Streptococcus salivarius PS4]
Length = 647
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 177/354 (50%), Gaps = 39/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+++ + + RHA TSK+ + D+ I T GFRGEAL SI+ +S L I+T
Sbjct: 61 GEGMAQADVAMSLRRHA-TSKIKNQGDL---FRIRTLGFRGEALPSIASISRLTIVTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G G + V KG + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 117 GEAYGTKLVAKGGEI-------ESQDPISAPVGTKITVENLFYNTPARLKYMKSLQAELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 226 NSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD--------- 270
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G+ G + P +++++ L D+ P K V + ++A I AI
Sbjct: 271 GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|417685662|ref|ZP_12334942.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41301]
gi|418158823|ref|ZP_12795529.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17227]
gi|332077480|gb|EGI87941.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41301]
gi|353826478|gb|EHE06636.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17227]
Length = 649
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLALFAK 396
>gi|168493871|ref|ZP_02718014.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC3059-06]
gi|169833770|ref|YP_001693695.1| DNA mismatch repair protein [Streptococcus pneumoniae Hungary19A-6]
gi|418077725|ref|ZP_12714949.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
4027-06]
gi|418079884|ref|ZP_12717100.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6735-05]
gi|418088589|ref|ZP_12725750.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43265]
gi|418097598|ref|ZP_12734700.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6901-05]
gi|418113777|ref|ZP_12750770.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5787-06]
gi|418115944|ref|ZP_12752921.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6963-05]
gi|418133909|ref|ZP_12770769.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11426]
gi|419492337|ref|ZP_14032065.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47210]
gi|421288835|ref|ZP_15739587.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA54354]
gi|421304151|ref|ZP_15754809.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA62331]
gi|238688359|sp|B1I8F2.1|MUTL_STRPI RecName: Full=DNA mismatch repair protein MutL
gi|168996272|gb|ACA36884.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
Hungary19A-6]
gi|183576093|gb|EDT96621.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC3059-06]
gi|353748747|gb|EHD29398.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
4027-06]
gi|353754203|gb|EHD34816.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6735-05]
gi|353764330|gb|EHD44879.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43265]
gi|353771754|gb|EHD52261.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6901-05]
gi|353788441|gb|EHD68838.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5787-06]
gi|353791582|gb|EHD71956.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6963-05]
gi|353903896|gb|EHE79410.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11426]
gi|379596034|gb|EHZ60839.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47210]
gi|395890095|gb|EJH01101.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA54354]
gi|395906542|gb|EJH17440.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA62331]
Length = 649
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|422872494|ref|ZP_16918987.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1087]
gi|328944744|gb|EGG38905.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1087]
Length = 688
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 214/470 (45%), Gaps = 61/470 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 42 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 101
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 102 GEGIDYEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 157
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 158 AGQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 212
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 213 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 269
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 270 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 310
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 311 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ 370
Query: 355 IAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ER 408
D++ DA L S + Q+S L + L +Q D + ++
Sbjct: 371 --------DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQ 422
Query: 409 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 458
++F+E V + NT+ + QP FAE P ++DH
Sbjct: 423 LSFEE----SVGPVQANTDEKAEPQPTSV------KFAERKPASYDQLDH 462
>gi|149005925|ref|ZP_01829654.1| DNA mismatch repair protein [Streptococcus pneumoniae SP18-BS74]
gi|147762281|gb|EDK69242.1| DNA mismatch repair protein [Streptococcus pneumoniae SP18-BS74]
Length = 535
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|418165805|ref|ZP_12802463.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17971]
gi|353831900|gb|EHE12023.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17971]
Length = 649
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 207/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V +LF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVENLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|225855945|ref|YP_002737456.1| DNA mismatch repair protein [Streptococcus pneumoniae P1031]
gi|225860206|ref|YP_002741715.1| DNA mismatch repair protein [Streptococcus pneumoniae Taiwan19F-14]
gi|387787376|ref|YP_006252444.1| DNA mismatch repair protein [Streptococcus pneumoniae ST556]
gi|410475679|ref|YP_006742438.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
gamPNI0373]
gi|417311764|ref|ZP_12098481.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA04375]
gi|418156406|ref|ZP_12793125.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16833]
gi|418226778|ref|ZP_12853399.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
3063-00]
gi|419437920|ref|ZP_13977990.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13499]
gi|419500942|ref|ZP_14040629.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47628]
gi|419527197|ref|ZP_14066744.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17719]
gi|421237638|ref|ZP_15694211.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2071247]
gi|421244085|ref|ZP_15700590.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2081685]
gi|444386710|ref|ZP_21184737.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS125219]
gi|444390661|ref|ZP_21188576.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS70012]
gi|444392295|ref|ZP_21190032.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS81218]
gi|444394946|ref|ZP_21192494.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0002]
gi|444396649|ref|ZP_21194136.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0006]
gi|444399485|ref|ZP_21196948.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0007]
gi|444401674|ref|ZP_21198857.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0008]
gi|444406031|ref|ZP_21202856.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0009]
gi|444407018|ref|ZP_21203685.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0010]
gi|444409114|ref|ZP_21205714.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0076]
gi|444413611|ref|ZP_21209926.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0153]
gi|444416228|ref|ZP_21212419.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0199]
gi|444417603|ref|ZP_21213633.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0360]
gi|444420637|ref|ZP_21216407.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0427]
gi|444422858|ref|ZP_21218497.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0446]
gi|254766180|sp|C1CI68.1|MUTL_STRZP RecName: Full=DNA mismatch repair protein MutL
gi|254766181|sp|C1CP43.1|MUTL_STRZT RecName: Full=DNA mismatch repair protein MutL
gi|225726107|gb|ACO21959.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae P1031]
gi|225727696|gb|ACO23547.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
Taiwan19F-14]
gi|327390582|gb|EGE88922.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA04375]
gi|353825683|gb|EHE05847.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16833]
gi|353883983|gb|EHE63785.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
3063-00]
gi|379137118|gb|AFC93909.1| DNA mismatch repair protein [Streptococcus pneumoniae ST556]
gi|379537925|gb|EHZ03106.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13499]
gi|379568360|gb|EHZ33340.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17719]
gi|379603187|gb|EHZ67956.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47628]
gi|395605164|gb|EJG65295.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2071247]
gi|395611051|gb|EJG71125.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2081685]
gi|406368624|gb|AFS42314.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
gamPNI0373]
gi|444254461|gb|ELU60894.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS125219]
gi|444257124|gb|ELU63462.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS70012]
gi|444258915|gb|ELU65232.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0002]
gi|444261880|gb|ELU68178.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0006]
gi|444263698|gb|ELU69849.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS81218]
gi|444267775|gb|ELU73664.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0008]
gi|444268660|gb|ELU74501.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0007]
gi|444270432|gb|ELU76203.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0009]
gi|444270614|gb|ELU76365.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0010]
gi|444272782|gb|ELU78469.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0153]
gi|444277865|gb|ELU83357.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0199]
gi|444280327|gb|ELU85698.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0076]
gi|444283519|gb|ELU88716.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0360]
gi|444284127|gb|ELU89289.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0427]
gi|444287779|gb|ELU92690.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0446]
Length = 649
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVDQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|419439426|ref|ZP_13979483.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40410]
gi|379581911|gb|EHZ46794.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40410]
Length = 649
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|418075315|ref|ZP_12712557.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47502]
gi|353751329|gb|EHD31961.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47502]
Length = 649
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|419498775|ref|ZP_14038475.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47597]
gi|379603663|gb|EHZ68431.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47597]
Length = 649
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|418093031|ref|ZP_12730162.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49138]
gi|418140793|ref|ZP_12777608.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13455]
gi|418151932|ref|ZP_12788672.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16121]
gi|418163526|ref|ZP_12800202.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17371]
gi|419518006|ref|ZP_14057616.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA08825]
gi|353767384|gb|EHD47918.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49138]
gi|353808312|gb|EHD88579.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13455]
gi|353818577|gb|EHD98775.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16121]
gi|353832952|gb|EHE13064.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17371]
gi|379642219|gb|EIA06751.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA08825]
Length = 649
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLISAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVDQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|15900110|ref|NP_344714.1| DNA mismatch repair protein [Streptococcus pneumoniae TIGR4]
gi|15902204|ref|NP_357754.1| DNA mismatch repair protein [Streptococcus pneumoniae R6]
gi|111657934|ref|ZP_01408643.1| hypothetical protein SpneT_02000883 [Streptococcus pneumoniae
TIGR4]
gi|116516396|ref|YP_815684.1| DNA mismatch repair protein [Streptococcus pneumoniae D39]
gi|148983575|ref|ZP_01816894.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP3-BS71]
gi|148987911|ref|ZP_01819374.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP6-BS73]
gi|148992754|ref|ZP_01822397.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP9-BS68]
gi|148996599|ref|ZP_01824317.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP11-BS70]
gi|149017847|ref|ZP_01834306.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP23-BS72]
gi|168483814|ref|ZP_02708766.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC1873-00]
gi|168490361|ref|ZP_02714560.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae SP195]
gi|168576395|ref|ZP_02722278.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae MLV-016]
gi|182683158|ref|YP_001834905.1| DNA mismatch repair protein [Streptococcus pneumoniae CGSP14]
gi|221231085|ref|YP_002510237.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae ATCC
700669]
gi|237649752|ref|ZP_04524004.1| DNA mismatch repair protein [Streptococcus pneumoniae CCRI 1974]
gi|237821450|ref|ZP_04597295.1| DNA mismatch repair protein [Streptococcus pneumoniae CCRI 1974M2]
gi|298230110|ref|ZP_06963791.1| DNA mismatch repair protein [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255027|ref|ZP_06978613.1| DNA mismatch repair protein [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298501976|ref|YP_003723916.1| DNA mismatch repair protein [Streptococcus pneumoniae TCH8431/19A]
gi|303255123|ref|ZP_07341199.1| DNA mismatch repair protein [Streptococcus pneumoniae BS455]
gi|307066856|ref|YP_003875822.1| DNA mismatch repair protein [Streptococcus pneumoniae AP200]
gi|387756741|ref|YP_006063720.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae OXC141]
gi|387758536|ref|YP_006065514.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae INV200]
gi|405761627|ref|YP_006702223.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae SPNA45]
gi|415696722|ref|ZP_11456364.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 459-5]
gi|415748558|ref|ZP_11476610.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae SV35]
gi|415751284|ref|ZP_11478519.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae SV36]
gi|417678152|ref|ZP_12327553.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17570]
gi|417693104|ref|ZP_12342293.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47901]
gi|417695339|ref|ZP_12344519.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47368]
gi|417697654|ref|ZP_12346827.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41317]
gi|418073060|ref|ZP_12710323.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11184]
gi|418082083|ref|ZP_12719285.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44288]
gi|418084273|ref|ZP_12721461.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47281]
gi|418090805|ref|ZP_12727950.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44452]
gi|418095272|ref|ZP_12732388.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16531]
gi|418099761|ref|ZP_12736850.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7286-06]
gi|418101886|ref|ZP_12738963.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP070]
gi|418104256|ref|ZP_12741316.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44500]
gi|418108413|ref|ZP_12745448.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41410]
gi|418109145|ref|ZP_12746174.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49447]
gi|418118121|ref|ZP_12755082.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA18523]
gi|418122504|ref|ZP_12759439.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44378]
gi|418124800|ref|ZP_12761723.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44511]
gi|418127086|ref|ZP_12763984.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP170]
gi|418136248|ref|ZP_12773092.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11663]
gi|418145421|ref|ZP_12782207.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13637]
gi|418147663|ref|ZP_12784430.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13856]
gi|418149755|ref|ZP_12786511.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14798]
gi|418168272|ref|ZP_12804918.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19077]
gi|418170405|ref|ZP_12807035.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19451]
gi|418174995|ref|ZP_12811593.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41437]
gi|418177232|ref|ZP_12813817.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41565]
gi|418181816|ref|ZP_12818377.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43380]
gi|418186201|ref|ZP_12822732.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47360]
gi|418188426|ref|ZP_12824941.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47373]
gi|418190646|ref|ZP_12827151.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47388]
gi|418194981|ref|ZP_12831462.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47688]
gi|418197097|ref|ZP_12833563.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47778]
gi|418199261|ref|ZP_12835710.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47976]
gi|418213381|ref|ZP_12840116.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA54644]
gi|418215660|ref|ZP_12842386.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|418217928|ref|ZP_12844597.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP127]
gi|418220120|ref|ZP_12846777.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47751]
gi|418222482|ref|ZP_12849128.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5185-06]
gi|418228925|ref|ZP_12855536.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP01]
gi|418231324|ref|ZP_12857913.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA07228]
gi|418233400|ref|ZP_12859981.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA08780]
gi|418235618|ref|ZP_12862187.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19690]
gi|418237771|ref|ZP_12864328.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422218|ref|ZP_13962437.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43264]
gi|419424244|ref|ZP_13964447.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7533-05]
gi|419426378|ref|ZP_13966562.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5652-06]
gi|419428451|ref|ZP_13968622.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11856]
gi|419430628|ref|ZP_13970774.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP05]
gi|419432833|ref|ZP_13972955.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40183]
gi|419435090|ref|ZP_13975186.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
8190-05]
gi|419443829|ref|ZP_13983844.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19923]
gi|419445938|ref|ZP_13985944.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7879-04]
gi|419448097|ref|ZP_13988095.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
4075-00]
gi|419450191|ref|ZP_13990180.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP02]
gi|419452332|ref|ZP_13992307.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP03]
gi|419456775|ref|ZP_13996724.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02254]
gi|419459046|ref|ZP_13998982.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02270]
gi|419461316|ref|ZP_14001234.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02714]
gi|419463437|ref|ZP_14003333.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA04175]
gi|419468104|ref|ZP_14007977.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA06083]
gi|419470216|ref|ZP_14010076.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA07914]
gi|419472291|ref|ZP_14012144.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13430]
gi|419474565|ref|ZP_14014407.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14688]
gi|419479081|ref|ZP_14018894.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19101]
gi|419483446|ref|ZP_14023222.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43257]
gi|419485663|ref|ZP_14025430.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44128]
gi|419488682|ref|ZP_14028435.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44386]
gi|419496618|ref|ZP_14036330.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47522]
gi|419503063|ref|ZP_14042739.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47760]
gi|419505176|ref|ZP_14044837.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49194]
gi|419507284|ref|ZP_14046940.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49542]
gi|419513796|ref|ZP_14053424.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
England14-9]
gi|419522476|ref|ZP_14062059.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13723]
gi|419524950|ref|ZP_14064516.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14373]
gi|419531472|ref|ZP_14070992.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47794]
gi|419533629|ref|ZP_14073137.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17457]
gi|421205602|ref|ZP_15662669.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2090008]
gi|421210197|ref|ZP_15667189.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070035]
gi|421226351|ref|ZP_15683065.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2072047]
gi|421228864|ref|ZP_15685542.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2061376]
gi|421231013|ref|ZP_15687663.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2080076]
gi|421233229|ref|ZP_15689854.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2061617]
gi|421235368|ref|ZP_15691969.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2071004]
gi|421239754|ref|ZP_15696307.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2080913]
gi|421242011|ref|ZP_15698540.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2081074]
gi|421246350|ref|ZP_15702841.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2082170]
gi|421248538|ref|ZP_15705001.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2082239]
gi|421265262|ref|ZP_15716146.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR27]
gi|421269620|ref|ZP_15720477.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR48]
gi|421271830|ref|ZP_15722677.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR55]
gi|421277984|ref|ZP_15728796.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17301]
gi|421280223|ref|ZP_15731022.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA04672]
gi|421286705|ref|ZP_15737472.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58771]
gi|421290982|ref|ZP_15741726.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA56348]
gi|421293272|ref|ZP_15743999.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA56113]
gi|421299902|ref|ZP_15750574.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA19998]
gi|421306387|ref|ZP_15757034.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA60132]
gi|421308652|ref|ZP_15759283.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA62681]
gi|421310886|ref|ZP_15761499.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58981]
gi|421313159|ref|ZP_15763753.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA47562]
gi|61225739|sp|P0A3R1.1|HEXB_STRPN RecName: Full=DNA mismatch repair protein HexB
gi|61225740|sp|P0A3R2.1|HEXB_STRR6 RecName: Full=DNA mismatch repair protein HexB
gi|122279430|sp|Q04MR4.1|MUTL_STRP2 RecName: Full=DNA mismatch repair protein MutL
gi|238691184|sp|B2IS10.1|MUTL_STRPS RecName: Full=DNA mismatch repair protein MutL
gi|254766177|sp|B8ZKC9.1|MUTL_STRPJ RecName: Full=DNA mismatch repair protein MutL
gi|14971640|gb|AAK74354.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae TIGR4]
gi|15457702|gb|AAK98964.1| DNA mismatch repair protein [Streptococcus pneumoniae R6]
gi|116076972|gb|ABJ54692.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae D39]
gi|147757174|gb|EDK64213.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP11-BS70]
gi|147923722|gb|EDK74834.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP3-BS71]
gi|147926375|gb|EDK77448.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP6-BS73]
gi|147928480|gb|EDK79495.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP9-BS68]
gi|147931411|gb|EDK82389.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP23-BS72]
gi|172042907|gb|EDT50953.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC1873-00]
gi|182628492|gb|ACB89440.1| DNA mismatch repair protein [Streptococcus pneumoniae CGSP14]
gi|183393266|gb|ACC61793.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|183393272|gb|ACC61796.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|183571322|gb|EDT91850.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae SP195]
gi|183577800|gb|EDT98328.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae MLV-016]
gi|202073440|gb|ACC61792.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|202073445|gb|ACC61795.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|220673545|emb|CAR68031.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae ATCC
700669]
gi|251765212|gb|ACC61794.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|298237571|gb|ADI68702.1| DNA mismatch repair protein [Streptococcus pneumoniae TCH8431/19A]
gi|301799330|emb|CBW31865.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae OXC141]
gi|301801125|emb|CBW33798.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae INV200]
gi|302597953|gb|EFL65023.1| DNA mismatch repair protein [Streptococcus pneumoniae BS455]
gi|306408393|gb|ADM83820.1| DNA mismatch repair enzyme (predicted ATPase) [Streptococcus
pneumoniae AP200]
gi|332075846|gb|EGI86313.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17570]
gi|332202095|gb|EGJ16164.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41317]
gi|332203336|gb|EGJ17403.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47368]
gi|332204187|gb|EGJ18252.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47901]
gi|353752598|gb|EHD33223.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11184]
gi|353757520|gb|EHD38113.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44288]
gi|353760576|gb|EHD41152.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47281]
gi|353766178|gb|EHD46718.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44452]
gi|353772052|gb|EHD52558.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16531]
gi|353773760|gb|EHD54255.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7286-06]
gi|353776940|gb|EHD57414.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41410]
gi|353777598|gb|EHD58070.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP070]
gi|353778690|gb|EHD59156.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44500]
gi|353784438|gb|EHD64858.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49447]
gi|353792970|gb|EHD73340.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA18523]
gi|353797977|gb|EHD78307.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44378]
gi|353800891|gb|EHD81199.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP170]
gi|353801656|gb|EHD81958.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44511]
gi|353813861|gb|EHD94088.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13856]
gi|353816295|gb|EHD96504.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13637]
gi|353817897|gb|EHD98097.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14798]
gi|353836191|gb|EHE16279.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19077]
gi|353838699|gb|EHE18776.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19451]
gi|353843555|gb|EHE23599.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41437]
gi|353845674|gb|EHE25714.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41565]
gi|353850053|gb|EHE30057.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43380]
gi|353854023|gb|EHE34003.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47360]
gi|353855568|gb|EHE35537.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47373]
gi|353858245|gb|EHE38205.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47388]
gi|353863100|gb|EHE43029.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47688]
gi|353865634|gb|EHE45541.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47778]
gi|353866849|gb|EHE46745.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47976]
gi|353870664|gb|EHE50535.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA54644]
gi|353874566|gb|EHE54421.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|353877069|gb|EHE56913.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP127]
gi|353877917|gb|EHE57756.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47751]
gi|353881570|gb|EHE61383.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5185-06]
gi|353888990|gb|EHE68762.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA07228]
gi|353889984|gb|EHE69751.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA08780]
gi|353891363|gb|EHE71119.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP01]
gi|353893547|gb|EHE73292.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19690]
gi|353894904|gb|EHE74644.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353903306|gb|EHE78830.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11663]
gi|379533461|gb|EHY98674.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02254]
gi|379533918|gb|EHY99130.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02270]
gi|379535352|gb|EHZ00556.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02714]
gi|379540716|gb|EHZ05887.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA04175]
gi|379547849|gb|EHZ12984.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA07914]
gi|379548374|gb|EHZ13506.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA06083]
gi|379553193|gb|EHZ18277.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13430]
gi|379553702|gb|EHZ18785.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11856]
gi|379560097|gb|EHZ25123.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13723]
gi|379560654|gb|EHZ25676.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14373]
gi|379562072|gb|EHZ27086.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14688]
gi|379568591|gb|EHZ33570.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17457]
gi|379571522|gb|EHZ36479.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19923]
gi|379574415|gb|EHZ39358.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19101]
gi|379578955|gb|EHZ43863.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40183]
gi|379582957|gb|EHZ47834.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43257]
gi|379588572|gb|EHZ53412.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44128]
gi|379589549|gb|EHZ54388.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43264]
gi|379590797|gb|EHZ55635.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44386]
gi|379602743|gb|EHZ67513.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47522]
gi|379607090|gb|EHZ71836.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49194]
gi|379609798|gb|EHZ74535.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47794]
gi|379610437|gb|EHZ75168.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47760]
gi|379613419|gb|EHZ78131.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49542]
gi|379615396|gb|EHZ80102.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7879-04]
gi|379616759|gb|EHZ81452.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
8190-05]
gi|379619338|gb|EHZ84010.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5652-06]
gi|379621048|gb|EHZ85697.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7533-05]
gi|379624909|gb|EHZ89537.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
4075-00]
gi|379625336|gb|EHZ89963.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP02]
gi|379628295|gb|EHZ92899.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP03]
gi|379631872|gb|EHZ96448.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP05]
gi|379638286|gb|EIA02831.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
England14-9]
gi|381310889|gb|EIC51714.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae SV36]
gi|381318815|gb|EIC59532.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae SV35]
gi|381319815|gb|EIC60497.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 459-5]
gi|395575896|gb|EJG36456.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070035]
gi|395578023|gb|EJG38551.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2090008]
gi|395597210|gb|EJG57417.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2080076]
gi|395597421|gb|EJG57627.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2072047]
gi|395598531|gb|EJG58732.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2061376]
gi|395603941|gb|EJG64074.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2061617]
gi|395604287|gb|EJG64419.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2071004]
gi|395610628|gb|EJG70704.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2080913]
gi|395611874|gb|EJG71928.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2081074]
gi|395615167|gb|EJG75183.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2082239]
gi|395616469|gb|EJG76480.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2082170]
gi|395869284|gb|EJG80399.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR27]
gi|395870272|gb|EJG81385.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR48]
gi|395877389|gb|EJG88458.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR55]
gi|395883103|gb|EJG94146.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17301]
gi|395883580|gb|EJG94622.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA04672]
gi|395890964|gb|EJH01967.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58771]
gi|395896326|gb|EJH07293.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA56113]
gi|395896782|gb|EJH07747.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA56348]
gi|395900999|gb|EJH11936.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA19998]
gi|395910097|gb|EJH20971.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA60132]
gi|395912797|gb|EJH23654.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA62681]
gi|395913846|gb|EJH24695.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58981]
gi|395915130|gb|EJH25970.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA47562]
gi|404278516|emb|CCM09136.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae SPNA45]
gi|429317175|emb|CCP36928.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
SPN034156]
gi|429318717|emb|CCP31920.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
SPN034183]
gi|429320530|emb|CCP33893.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
SPN994039]
gi|429322350|emb|CCP29934.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
SPN994038]
Length = 649
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|417935282|ref|ZP_12578602.1| DNA mismatch repair protein [Streptococcus mitis bv. 2 str. F0392]
gi|340771852|gb|EGR94367.1| DNA mismatch repair protein [Streptococcus mitis bv. 2 str. F0392]
Length = 649
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 169/354 (47%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + + +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIAIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P ++++ L D+ P K V ++A + AI ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAISNSL 326
>gi|402817015|ref|ZP_10866604.1| DNA mismatch repair protein MutL [Paenibacillus alvei DSM 29]
gi|402505121|gb|EJW15647.1| DNA mismatch repair protein MutL [Paenibacillus alvei DSM 29]
Length = 795
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 170/355 (47%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L E + N + +G V+ + VV+ELV NS+DAGAT++ V V ++V D+
Sbjct: 1 MAIIKVLDEHIANQIAAGEVVERPSSVVKELVENSIDAGATRIDVSVEEGGLQLIRVKDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI D RH ATSK+ D+ I + GFRGEAL SI+ V+ +E++T
Sbjct: 61 GSGIGDDDAENAFLRH-ATSKIQTGKDL---FSIRSLGFRGEALPSIAAVAKVELVTSTD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R V++G + + GT + RDLFYN P R KYM++ ++ H +
Sbjct: 117 SSGLGRRLVIEGGTI--KSFEPAQSMQGTEITVRDLFYNTPARLKYMKTIQTELGH-ISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+A+ +P ++F +E LL T + L ++ S +G++ + +
Sbjct: 174 LIYRLAMSYPNIAFTL--KHNEHTLLQTIGNGDLLQVIASVYGVQTAKGMLHIKGEHLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E+ GYI P + S + IN RYV P+++ + +A + FL
Sbjct: 232 EVEGYIGKPELTRSNRNAMSWMINGRYVRSFPLNQAI------------LRAYHTFLPIN 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
R P +L++ SL D+ P K V F + AFIE +++ K+
Sbjct: 280 R-----YPMLVLHVNMHPSLVDVNVHPAKLEVRFSKEAELCAFIEETVKTLLHKQ 329
>gi|253750975|ref|YP_003024116.1| DNA mismatch repair protein [Streptococcus suis SC84]
gi|253752875|ref|YP_003026015.1| DNA mismatch repair protein [Streptococcus suis P1/7]
gi|386579035|ref|YP_006075440.1| DNA mismatch repair protein MutL [Streptococcus suis JS14]
gi|386581102|ref|YP_006077506.1| DNA mismatch repair protein MutL [Streptococcus suis SS12]
gi|386587335|ref|YP_006083736.1| DNA mismatch repair protein MutL [Streptococcus suis A7]
gi|403060757|ref|YP_006648973.1| DNA mismatch repair protein [Streptococcus suis S735]
gi|251815264|emb|CAZ50829.1| DNA mismatch repair protein MutL [Streptococcus suis SC84]
gi|251819120|emb|CAR44195.1| DNA mismatch repair protein MutL [Streptococcus suis P1/7]
gi|319757227|gb|ADV69169.1| DNA mismatch repair protein MutL [Streptococcus suis JS14]
gi|353733248|gb|AER14258.1| DNA mismatch repair protein MutL [Streptococcus suis SS12]
gi|354984496|gb|AER43394.1| DNA mismatch repair protein MutL [Streptococcus suis A7]
gi|402808083|gb|AFQ99574.1| DNA mismatch repair protein [Streptococcus suis S735]
Length = 645
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 170/357 (47%), Gaps = 37/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RH ATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRH-ATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H
Sbjct: 117 DSAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 172 V-DVVNRLSLAHPEIAFVLVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAED 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ISGY+S P + + + + ++IN RY+ ++ N L
Sbjct: 229 LDFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 270 EGYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|146317719|ref|YP_001197431.1| DNA mismatch repair protein [Streptococcus suis 05ZYH33]
gi|146319909|ref|YP_001199620.1| DNA mismatch repair protein [Streptococcus suis 98HAH33]
gi|386577057|ref|YP_006073462.1| putative mismatch repair protein HexB [Streptococcus suis GZ1]
gi|145688525|gb|ABP89031.1| DNA mismatch repair enzyme (predicted ATPase) [Streptococcus suis
05ZYH33]
gi|145690715|gb|ABP91220.1| DNA mismatch repair enzyme (predicted ATPase) [Streptococcus suis
98HAH33]
gi|292557519|gb|ADE30520.1| putative mismatch repair protein HexB [Streptococcus suis GZ1]
Length = 646
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 170/357 (47%), Gaps = 37/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 2 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 61
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RH ATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 62 GEGIAPDEVALALRRH-ATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATA 117
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H
Sbjct: 118 DSAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHI 172
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 173 V-DVVNRLSLAHPEIAFVLVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAED 229
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ISGY+S P + + + + ++IN RY+ ++ N L
Sbjct: 230 LDFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAIL 270
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 271 EGYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 327
>gi|223933913|ref|ZP_03625875.1| DNA mismatch repair protein MutL [Streptococcus suis 89/1591]
gi|386583187|ref|YP_006079590.1| DNA mismatch repair protein [Streptococcus suis D9]
gi|223897415|gb|EEF63814.1| DNA mismatch repair protein MutL [Streptococcus suis 89/1591]
gi|353735333|gb|AER16342.1| DNA mismatch repair protein [Streptococcus suis D9]
Length = 645
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 170/357 (47%), Gaps = 37/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RH ATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRH-ATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H
Sbjct: 117 DSAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 172 V-DVVNRLSLAHPEMAFALVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAED 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ISGY+S P + + + + ++IN RY+ ++ N L
Sbjct: 229 LDFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 270 EGYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|423611987|ref|ZP_17587848.1| DNA mismatch repair protein mutL [Bacillus cereus VD107]
gi|401246994|gb|EJR53338.1| DNA mismatch repair protein mutL [Bacillus cereus VD107]
Length = 647
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 172/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANGTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L + + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|386585255|ref|YP_006081657.1| DNA mismatch repair protein MutL [Streptococcus suis D12]
gi|353737401|gb|AER18409.1| DNA mismatch repair protein MutL [Streptococcus suis D12]
Length = 645
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 170/357 (47%), Gaps = 37/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RH ATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRH-ATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHIVIETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H
Sbjct: 117 DSAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 172 V-DVVNRLSLAHPEIAFVLVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAED 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ISGY+S P + + + + ++IN RY+ ++ N L
Sbjct: 229 LDFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 270 EGYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|395243132|ref|ZP_10420119.1| DNA mismatch repair protein mutL [Lactobacillus hominis CRBIP
24.179]
gi|394484362|emb|CCI81127.1| DNA mismatch repair protein mutL [Lactobacillus hominis CRBIP
24.179]
Length = 625
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 168/354 (47%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+EL NS+DAGAT++ V ++ + V D+
Sbjct: 1 MAKIHELSAELTNQIAAGEVIERPASVVKELCENSIDAGATRIRVNFINAGLQEISVQDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI++D L L RHA TSK+ D+ I T GFRGEALASI+ V+ +EI+T
Sbjct: 61 GSGIAKDQLDLAFTRHA-TSKISTQRDL---FNISTLGFRGEALASIAAVAHVEILTNTS 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G K G K LG +D GT +V RDLFYN P R KY++S ++L V
Sbjct: 117 GANGVSAKFAAGKK---LGQEDAAAPQGTKIVVRDLFYNTPARLKYLRSERTEILKIV-D 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP++SF + + +L T + + +G + ++
Sbjct: 173 IVDRLALGHPEISFTLTN--NNKPILKTVGRDDLRLDIANIYGRHLAEKMIKIQGQTPDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ISG ISS D+ S + F +N RYV ++L L + + G
Sbjct: 231 KISGLISSAQDTRSTRNFISFLLNGRYVKN---YQLTQSLISGY--------------GS 273
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ ++ P ++N+ L D+ P K V + + I + I +K
Sbjct: 274 KIAAKRYPIAVINIELDPLLVDVNVHPTKQEVRLSKEKELERLITQTITDTLLK 327
>gi|422857402|ref|ZP_16904052.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1057]
gi|327463453|gb|EGF09772.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1057]
Length = 673
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 173/358 (48%), Gaps = 39/358 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 27 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 86
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 87 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 142
Query: 120 GRPNGYRKVMKGSKCLYLGIDDE---RKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 143 AGQHGTLLVAQGGE-----IEEHVPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 197
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAN 235
V + R++L HP+V+F I S+ + + S L IS +G+ + E++A+
Sbjct: 198 V-DVINRLSLAHPEVAFTLI---SDGREMTRTAGSGNLRQAISGIYGLATAKKMVEISAS 253
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
D E+SGY+S P + + + + + IN RY+ ++ N
Sbjct: 254 DLDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAI 294
Query: 296 LKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
L G SK P ++N++ L D+ P K V ++A I +AI ++
Sbjct: 295 LDGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSL 352
>gi|253754700|ref|YP_003027840.1| DNA mismatch repair protein [Streptococcus suis BM407]
gi|251817164|emb|CAZ54885.1| DNA mismatch repair protein MutL [Streptococcus suis BM407]
Length = 645
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 170/357 (47%), Gaps = 37/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RH ATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRH-ATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H
Sbjct: 117 DSAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 172 V-DVVNRLSLAHPEIAFVLVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAED 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ISGY+S P + + + + ++IN RY+ ++ N L
Sbjct: 229 LDFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 270 EGYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|387625671|ref|YP_006061843.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae INV104]
gi|444383819|ref|ZP_21181999.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS8106]
gi|444385836|ref|ZP_21183905.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS8203]
gi|301793453|emb|CBW35826.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae INV104]
gi|444248262|gb|ELU54774.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS8106]
gi|444249153|gb|ELU55648.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS8203]
Length = 649
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GYGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|349859114|gb|AEQ20594.1| DNA mismatch repair enzyme [uncultured bacterium CSLF42]
Length = 594
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 173/350 (49%), Gaps = 29/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M + +LPE++ + +G V+ V++ELV NS+DAGA K+ + + G ++V DD
Sbjct: 1 MPKVQKLPESLIRLIAAGEVVERPASVLKELVENSLDAGARKIAIDLWGAGRSRIRVTDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++R+ +RHA TSKL DD + TFGFRGEAL SI+ VS LE+ T+
Sbjct: 61 GEGMTREDAEAALDRHA-TSKL---KTFDDLYNLSTFGFRGEALPSIAAVSRLELTTRPQ 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+P +R ++G + L + +GTT+ +DLF+N P R K+++ + + K
Sbjct: 117 AQPTAWRLTLEGGRL--LSSEAAGAPLGTTIDVQDLFFNTPARSKFLKRDSTERTR-LLK 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
+ I L P V F+ + M+ ++ L T S++ L ++ +G+ L ++ G
Sbjct: 174 TIQEITLARPDVRFE-VCMDGKN--LYTFSTAKNLGERVADVWGLSATENLVPIDVAQGP 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
I G++++ KA Q +Y+N R V + +LL H A ++ W G
Sbjct: 231 CTIRGFVNAIPAHHPTKALQLLYVNQRPVQQ----RLLTH--AVYEAYKEW-----LPVG 279
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+ P +LL + L D+ P K V F D + + R IR
Sbjct: 280 RH------PIFLLFITLDPKLVDVNVHPTKREVRFSDERAIYDLLFRKIR 323
Score = 47.0 bits (110), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 23/192 (11%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
++L K +I G L +IDQHAA ER+ E L + S +G A ++ +L
Sbjct: 407 RLLGVFRKLYIAAEQGEDLLLIDQHAAAERVLFERLLAQS-STQG-------APRQALLT 458
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1287
+ +++ AE +K ++ N+ G +L + L P +
Sbjct: 459 PLLWEISVARAEVVK--AYLPNLQELG-------FSLEPFGPSTFALKEWPAVLP---QS 506
Query: 1288 VDLLEFLQQLADT-DGSSTTPPSVLR--VLNSKACRGAIMFGDSLLPSECALIVEELKQT 1344
FL++L D + T +V++ + ACR AIM GD + P+E ++ +L
Sbjct: 507 KQAERFLEELLDAFEEERPTDKTVIQHQIAARAACRSAIMAGDPIAPAEIDRLLADLAAC 566
Query: 1345 SLCFQCAHGRPT 1356
C HGRPT
Sbjct: 567 ERPMTCPHGRPT 578
>gi|260063474|ref|YP_003196554.1| DNA mismatch repair protein [Robiginitalea biformata HTCC2501]
gi|88782918|gb|EAR14092.1| putative DNA mismatch repair protein [Robiginitalea biformata
HTCC2501]
Length = 623
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 167/346 (48%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LPE V N + +G V+ VV+EL+ N+VDAGA++V + V V+VVDDG G
Sbjct: 5 IKLLPEHVANQIAAGEVVQRPASVVKELLENAVDAGASRVQLIVKDGGKALVQVVDDGCG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S +L RH ATSK+ +D+ + T GFRGEALASI+ ++ +E+ T+ G
Sbjct: 65 MSPADALLSFRRH-ATSKISEASDL---FRLHTKGFRGEALASIAAIAQVEMQTREDGAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
R + G ++ VGT++ ++LF+N P RR +++S + H +++
Sbjct: 121 LATRIRIAGDTV--QSREEAVAPVGTSISVKNLFFNIPARRNFLKSDKVEYRHVLEE-FQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP V+F + +SE L + + L FG + L V EI
Sbjct: 178 RVALAHPGVAFSMVHNDSEVHQLPEANLRQRIVHL---FGSRMNTRLVPVREETQLAEID 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+I P + + QY ++N R++ +H + A G L K
Sbjct: 235 GFICKPEFAKKSRGEQYFFVNDRFIRSAYLHHAI------------LTAFEGLL-----K 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P Y L L+ P D+ P KT V F+D + + A + A++
Sbjct: 278 PDTYPGYFLYLQVPAGAIDINIHPTKTEVKFEDEQSLYAILRSAVK 323
>gi|372208677|ref|ZP_09496479.1| DNA mismatch repair protein MutL [Flavobacteriaceae bacterium S85]
Length = 636
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 196/426 (46%), Gaps = 40/426 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGA + + ++V+DDGSG
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGAKNIHLILKDAGKTLIQVIDDGSG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S+ L ERH ATSK + + +D + T GFRGEA+ASI+ ++ +E+ T+
Sbjct: 65 MSQTDARLCFERH-ATSK---IREAEDLFNLNTKGFRGEAMASIAAIAQVEMKTRLATEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++ SK ++ I VGT ++LF+N P RR +++S + H + +
Sbjct: 121 LGTCIQIEASKIIHQEIT--TTPVGTNTCVKNLFFNIPARRNFLKSDAVETRHIIDE-FQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+ALVHP + F M + + S + +++ FG + L + + + +
Sbjct: 178 RVALVHPDIGFA---MNHNNSEIFKLPSGNLKQRVVNIFGQKTNEKLIPIQEDTDLVSVD 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+I P S + Q+ ++N+R++ +H +N ++FD G L+ +
Sbjct: 235 GFIIKPQFSKKKRGEQFFFVNNRFIKSPYLHHAIN---SAFD---------GLLEREHH- 281
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P Y L L+ P D+ P KT V F + + + I+ A++ + + S D
Sbjct: 282 ----PGYFLYLKVPTHSIDINIHPTKTEVKFDNEKVLYEIIKAAVKHSLGQFNMKPSLDF 337
Query: 363 DMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDPVELA 422
++ E P H +P+K Q D F+ F F DP +
Sbjct: 338 SRDKNLETPY------------HYKDAPIKTPTIQVDPNFNPFKSESNFNPFDTDPKPVK 385
Query: 423 EENTEM 428
+ N +
Sbjct: 386 KTNVNL 391
>gi|322517656|ref|ZP_08070521.1| DNA mismatch repair protein HexB [Streptococcus vestibularis ATCC
49124]
gi|322123733|gb|EFX95318.1| DNA mismatch repair protein HexB [Streptococcus vestibularis ATCC
49124]
Length = 645
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 195/401 (48%), Gaps = 52/401 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MTKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+++ + + RHA TSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 61 GEGMAQADVAMSLRRHA-TSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAAD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G G + V K + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 117 GEAYGTKLVAKAGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 226 NSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD--------- 270
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
G+ G + P +++++ L D+ P K V + ++A I AI + +
Sbjct: 271 GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAIAQSLRE 328
Query: 354 KIAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 392
+ D++ DA L S+R + T L PLK
Sbjct: 329 Q--------DLIPDALENLAKSSTRGAAKSVQTSL---PLK 358
>gi|302023154|ref|ZP_07248365.1| DNA mismatch repair protein [Streptococcus suis 05HAS68]
Length = 645
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 170/357 (47%), Gaps = 37/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RH ATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRH-ATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H
Sbjct: 117 DSAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 172 V-DVVNRLSLAHPEMAFALVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAED 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ISGY+S P + + + + ++IN RY+ ++ N L
Sbjct: 229 LDFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 270 EGYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|390956618|ref|YP_006420375.1| DNA mismatch repair protein MutL [Terriglobus roseus DSM 18391]
gi|390411536|gb|AFL87040.1| DNA mismatch repair protein MutL [Terriglobus roseus DSM 18391]
Length = 695
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 176/385 (45%), Gaps = 51/385 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
MG I L + V N + +G V+ VV+EL+ N+VDAGAT++ + V G +++VD+
Sbjct: 1 MGRIRVLSDQVANQIAAGEVVERPASVVKELLENAVDAGATRIRIEVEGGGRKLIRIVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ RD +L ERHA TSKL DD I T GFRGEAL SI+ V+ +E+ T++
Sbjct: 61 GHGMVRDDAMLAFERHA-TSKL---RSADDLLHIATLGFRGEALPSIASVARVELDTRSE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G K ++D VGTT+ RDLF+N P R+K+++S P ++ H V
Sbjct: 117 EDAVGTRIEIHGGKMTK--VEDVGVPVGTTIAIRDLFFNVPARKKFLKSEPTELSH-VAA 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIE------------DFS 227
V AL HP+ F+ + LL + L G + DF+
Sbjct: 174 LVTHYALAHPEKHFEL--HSATHALLVAPAVRDASERLYQILGSDISRDMLPCAAEVDFT 231
Query: 228 FL------------DEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKL 275
D V G L + G++S P + YV++N R V +L
Sbjct: 232 RAGLPEPPPWRREEDYVAPEPGYLRVRGFVSKPELQKLNRGSIYVFVNGRQVRD----RL 287
Query: 276 LNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD 335
+ H ++++K + P LL L P + D+ P KT V F+
Sbjct: 288 ILHA-----LTEAYK--------NILPPTSFPVVLLFLEMPAAEVDVNVHPAKTEVRFRQ 334
Query: 336 WEPVLAFIERAIRSAWMKKIAHDSF 360
V F+ +R+ +K SF
Sbjct: 335 SSFVHDFVRDTVRNTVLKARPAASF 359
>gi|157373934|ref|YP_001472534.1| DNA mismatch repair protein [Shewanella sediminis HAW-EB3]
gi|189030416|sp|A8FRD3.1|MUTL_SHESH RecName: Full=DNA mismatch repair protein MutL
gi|157316308|gb|ABV35406.1| DNA mismatch repair protein MutL [Shewanella sediminis HAW-EB3]
Length = 624
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 185/381 (48%), Gaps = 32/381 (8%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ V++ELV NS+DAGAT+V + + +K+ D+GS
Sbjct: 2 TIQILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIKIHDNGS 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GIS++ L L RHA TSKL L D+D I +FGFRGEALASIS VS L + ++ +
Sbjct: 62 GISKEDLGLALSRHA-TSKLSSLDDLD---AILSFGFRGEALASISSVSRLTLTSRTADQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++ +GS + + + VG+TV + DLF+N P RR++++S + H + + +
Sbjct: 118 VEAWQAYAEGSD-MAVKVIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTH-IDEWL 175
Query: 182 LRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
RIALV + F + + T + L L G + E+N L+
Sbjct: 176 KRIALVRSDIHFTLKHNGKVVRNYRATNTQDQYLQRLAQISGKKFAEQAIEINCQHDDLK 235
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
++GY+ SP+ QY Y+N R V +L+NH A
Sbjct: 236 LTGYVQSPFFETPASDTQYFYVNGRLVRD----RLVNH------------AVRQAFAEHE 279
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 360
+ QA +L L PH + D+ P K V F V +I +A++SA + ++ +
Sbjct: 280 TGEQASYVLMLELD-PHQV-DVNVHPAKHEVRFHQSRYVHDYIFQALQSA-LHQVGRLAI 336
Query: 361 DVDMLEDAELPLESSRFQSHQ 381
D D D + S QSH+
Sbjct: 337 DSDNKLDTD-----SHSQSHE 352
>gi|149011044|ref|ZP_01832349.1| DNA mismatch repair protein [Streptococcus pneumoniae SP19-BS75]
gi|147764680|gb|EDK71610.1| DNA mismatch repair protein [Streptococcus pneumoniae SP19-BS75]
Length = 420
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEVEE--VIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|423615970|ref|ZP_17591804.1| DNA mismatch repair protein mutL [Bacillus cereus VD115]
gi|401260507|gb|EJR66680.1| DNA mismatch repair protein mutL [Bacillus cereus VD115]
Length = 650
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLMIKGGDIIKREKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP++S K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEISLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|242237985|ref|YP_002986166.1| DNA mismatch repair protein [Dickeya dadantii Ech703]
gi|242130042|gb|ACS84344.1| DNA mismatch repair protein MutL [Dickeya dadantii Ech703]
Length = 629
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 177/352 (50%), Gaps = 33/352 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ + VV+ELV NS+DAGATK+ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPSSVVKELVENSLDAGATKIDIEIERGGARLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKADLTLALARHA-TSKI---ATLDDLEAIVSLGFRGEALASISSVSRLTLTSRTADQA 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK++++ + +H + + V
Sbjct: 119 EAWQAYAEGRE-MAVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFMH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 238
RIAL V+F ++ +L+ +++ + G I +FL V+ G
Sbjct: 177 RIALARFDVAF---NLHHNGKLVRQYRAATDPSQQERRLGSICGAAFLQHALAVSWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S + QY Y+N R + +LLNH +A L G
Sbjct: 234 LNIHGWVADPAGSRQLPEMQYCYVNQRMMRD----RLLNHAIR--------QAYQDQLHG 281
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
++ PAY+L L PH + D+ P K V F V FI +A+ S
Sbjct: 282 EQQ-----PAYVLYLDVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMS 327
>gi|374581417|ref|ZP_09654511.1| DNA mismatch repair protein MutL [Desulfosporosinus youngiae DSM
17734]
gi|374417499|gb|EHQ89934.1| DNA mismatch repair protein MutL [Desulfosporosinus youngiae DSM
17734]
Length = 649
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 164/346 (47%), Gaps = 35/346 (10%)
Query: 13 NTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSGISRDGLVLL 71
N + +G V+ VV+ELV NS+DAGA + + V G ++V DDG+GI + L L
Sbjct: 14 NQISAGEVVERPASVVKELVENSLDAGANHIDITVEGNGVPLIRVRDDGNGIGSEDLPLA 73
Query: 72 GERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKG 131
RHA TSK+ + D+D + T GFRGEAL SI+ VS LEI ++ +P G
Sbjct: 74 VIRHA-TSKITQIEDLDQ---LRTLGFRGEALPSIASVSKLEISSRPADQPAGL------ 123
Query: 132 SKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALV 187
S L G +E K++ GT V RDLF+N P R K+++S+P + + V RIAL
Sbjct: 124 SLTLNAGEQEEMKEIGCPAGTCVTVRDLFFNTPARLKFLKSTPTE-FGLISDTVGRIALA 182
Query: 188 HPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISS 247
HP ++F +L T + + G L VN + + G+IS
Sbjct: 183 HPDIAFSL--THPHQVVLQTSGRGDLREAIAAVLGHAIARQLIPVNVHHEKWHLQGFISP 240
Query: 248 PYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACP 307
P S + QY IN R + + P+ L LA + K + P
Sbjct: 241 PSLVRSSRQAQYFMINGR-IIRSPL--LSRALAEGYHTLIPAKLH--------------P 283
Query: 308 AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+L+L P S YD+ P K V FK+ + + FI A+ + +K
Sbjct: 284 IAVLHLSVPPSDYDVNVHPTKMDVRFKEEQELTLFIREAVYNTLIK 329
Score = 56.6 bits (135), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 83/205 (40%), Gaps = 37/205 (18%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP-E 1228
L Q+ +I G L +IDQHAA ERI E L + E S A L + LP E
Sbjct: 464 LTQLFNTYILATDGKILLMIDQHAAHERINYERLLKEFKQAEKSSQALL-----IPLPME 518
Query: 1229 IGYQLLQNFAEQIKDWGWICN-----IHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV 1283
Q Q E + WI N + GSR++ L VP G
Sbjct: 519 FTLQEEQVLLENL----WILNEMGFILEQFGSRTY--------------LLRGVPAQTGA 560
Query: 1284 NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNS----KACRGAIMFGDSLLPSECALIVE 1339
+D + L+Q D +PP+ ++L AC+ +I DSL E ++
Sbjct: 561 FQAD----DLLRQFIDQVLLKNSPPTFDKILEEWIYMLACKESIKANDSLNLLEMEQLIA 616
Query: 1340 ELKQTSLCFQCAHGRPTTVPLVNLE 1364
L +T + C HGRPT + + E
Sbjct: 617 SLSRTQNPYTCPHGRPTMITMTRSE 641
>gi|167750507|ref|ZP_02422634.1| hypothetical protein EUBSIR_01483 [Eubacterium siraeum DSM 15702]
gi|167656433|gb|EDS00563.1| DNA mismatch repair domain protein [Eubacterium siraeum DSM 15702]
Length = 677
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 185/359 (51%), Gaps = 39/359 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L ++V + +G V+ + V++ELV NS+DAGA + V + G+ Y+++
Sbjct: 1 MPEIRLLDKSVAELIAAGEVIERPSSVIKELVENSIDAGARHITVEIKHGGIS--YMRIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
DDG GI+ + RHA TSK+ DD TGI T GFRGEALAS++ V+ +E++++
Sbjct: 59 DDGCGIAYAQMPTAFLRHA-TSKI---RTGDDLTGIMTMGFRGEALASVAAVAKIEMMSR 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKD----VGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
G G R +++G G + E + GTT+V ++LFYN P R K+++ +
Sbjct: 115 QDGDELGGRYIIEG------GEEKEHESCGCPTGTTIVIKELFYNTPARLKFLKKDISEG 168
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 233
+ + V R+AL HP +SF+FI + T S L+ + G + L V+
Sbjct: 169 -NFIAATVDRLALSHPDISFRFI--RDNKSVRMTSGDGSLLSAAKAVSGRQFADSLIPVD 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+ +++SGY+SSP + ++ Q ++N+RY+ K +AA ++++ N
Sbjct: 226 FSLNGIDVSGYVSSPLFCRNSRSMQTFFVNTRYI------KSTTCMAA---LEEAYR--N 274
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
+ GK PA +LN+ D+ P KT + F +PV + A+++A +
Sbjct: 275 SMMVGK------FPACILNISLSPETVDVNVHPAKTEIRFAYEKPVFDAVYFAVKNALV 327
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 1167 AKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVL 1226
+V+ + K +I A L +ID+HAA ERIR E+L+ + ++ + L + EL L
Sbjct: 494 VRVIGEFLKTYILCEADEELIIIDKHAAHERIRFEKLKEEFVT----TSQLLIDKTELKL 549
Query: 1227 PEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLS 1286
Y+ L + E ++ G + L+ + + + A+P + +
Sbjct: 550 SPEEYEALHEYYEYVEQSG----------------IELVFCDDSTVQITAMPSVVKCSPQ 593
Query: 1287 DVDLLEFLQQLADTDGSSTTPPSVL--RVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1344
++ + + Q+L +T +T L +L++ AC+ AI D E + + +
Sbjct: 594 EI-VSDVAQRLMNT---ATDQKGALFDDMLHTMACKSAIKAHDDTDILELQALADRVMND 649
Query: 1345 SLCFQCAHGRPTTVPL 1360
C HGRP L
Sbjct: 650 RTIRFCPHGRPVMTAL 665
>gi|325263901|ref|ZP_08130634.1| DNA mismatch repair protein HexB [Clostridium sp. D5]
gi|324030939|gb|EGB92221.1| DNA mismatch repair protein HexB [Clostridium sp. D5]
Length = 743
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 155/277 (55%), Gaps = 10/277 (3%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ +V+ELV N++DA AT V V + ++++ D+
Sbjct: 1 MPHIQVLDQITIDKIAAGEVIERPASIVKELVENAIDARATAVVVEIQEGGISFIRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI R+ + RH+ TSK+ + D+ + I + GFRGEAL+SI+ V+ +E+ITK
Sbjct: 61 GSGIVREDVPNAFLRHS-TSKIRAVEDL---SHIESLGFRGEALSSIAAVTQVELITKTR 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R +++G K L +D GTT + R LFYN P RRK++++ + H ++
Sbjct: 117 EDTFGTRYLIEGGKEQSL--EDTGAPDGTTFLIRQLFYNVPARRKFLKTPMTEAGH-IQD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
++R+AL HP+VSF+FI+ + E L T + ++ S +G E + L +++ G +
Sbjct: 174 LLMRLALSHPEVSFQFIN--NGQEKLRTSGNGRLKDVIYSIYGREVAANLIDMDYEKGGI 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLL 276
I+GY+ P S + F+ +IN RYV I K +
Sbjct: 232 RITGYLGKPTISRGNRNFENFFINGRYVKSSMISKAI 268
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 132/344 (38%), Gaps = 62/344 (18%)
Query: 1048 HLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKA-ENFKLSLCPHAHLGAQA 1106
+++++ A+ +P + E+ + ES T+ D +T +A EN + P
Sbjct: 426 RIREAAESRRADEQPKTGLEERPAEMIRESKTVFDPAKTEEASENLRNMSVP-------- 477
Query: 1107 EGTSIISGTKWRNGHPQTTNNNISC------------DIHNQDNILDISSGLLHLTGE-- 1152
G + + N P NIS +I+ + + L L G+
Sbjct: 478 -GLQNYNSIEKENAAPSAGEENISPGLSIPSRLSEDKEIYGDSKNPENDASLSELAGKTE 536
Query: 1153 ---FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLS 1209
F + + + K++ QV + V +L +IDQHAA ER+ L + L
Sbjct: 537 QLNLFDEKLLKREVKAEYKLIGQVFDTYWLVQFQDSLYIIDQHAAHERV----LYERTLK 592
Query: 1210 GEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI 1269
G + F Q I ++ Q + N++++ QR
Sbjct: 593 GMKN---------------------REFTSQYLSPPIILSLSMQETELLNEHMDRFQRIG 631
Query: 1270 TVI--------TLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACR 1320
I + A+P +FG+ ++ LLE L L D +S TP + + S +C+
Sbjct: 632 FEIEPFGGDEYAVRAIPDNLFGIAKKEL-LLEMLDGLTDGITTSMTPELIDEKVASMSCK 690
Query: 1321 GAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
A+ + L E ++ EL + + C HGRPT + + E
Sbjct: 691 AAVKGNNRLSAMEVDTLIGELLELDNPYHCPHGRPTIIAMTKRE 734
>gi|242022721|ref|XP_002431787.1| DNA mismatch repair protein, putative [Pediculus humanus corporis]
gi|212517112|gb|EEB19049.1| DNA mismatch repair protein, putative [Pediculus humanus corporis]
Length = 1233
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 175/355 (49%), Gaps = 17/355 (4%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSG 62
+I +LP +SG V+ DL + V ELV+N++DA ++ + + V + ++V+D+G+G
Sbjct: 2 SIQKLPPEAIVKFQSGNVITDLVQSVLELVYNALDAESSTILIRVDLKKFLIQVIDNGNG 61
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGR 121
I L +GER+ + H I T+G++G+AL+S+ +V L I T+ G
Sbjct: 62 IGISDLEKVGERYMTSKYNSHFC------SINTYGYKGQALSSLVEVCKTLRIETRTKGD 115
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
K + + L + +KDVGT V D ++ PVR+K + L +K +
Sbjct: 116 NVTAIKTFENGRMLNILHTSTKKDVGTFVSVEDFMFSMPVRKKRINEVFD--LEELKTQL 173
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++L+H KVSF + L T ++S L FG+ +L + +D I
Sbjct: 174 KYLSLIHHKVSFTLKNEHKNLILFQTQPTNSILESTKKIFGVTMTKYLKKTTFSDNVFLI 233
Query: 242 SGYIS-SPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
G IS P S S+ Q +Y+N+R + KG IHK++N + ++ S K+ + +
Sbjct: 234 KGLISKKPRLSSSL---QLIYVNNRVIAKGSIHKVVNDMISNHIKEMSIKSASSLEEKIV 290
Query: 301 SKSQACP---AYLLNLRCPHSLYDL-TFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
KS P Y++ + C S Y+L T + K V FK+W+ + +AI+ +
Sbjct: 291 LKSLINPTHNVYVIKIYCSLSEYELFTTNLRKNKVKFKNWDVLKNCFRKAIKKVF 345
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 115/247 (46%), Gaps = 33/247 (13%)
Query: 1161 KSCLEDAKVLQQVDKKFIP---VVAG----GTLAVIDQHAADERIRLEELRHK-----VL 1208
K L + +++ Q+DKKFI +V G + + DQHA DERIRLE+L ++ +L
Sbjct: 991 KELLSEVEIIGQLDKKFIVAKMIVEGPKRKELITLFDQHAVDERIRLEKLMNENSTDYIL 1050
Query: 1209 SGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQ 1268
+ L E L E +++ +F EQ + G C T + +L +
Sbjct: 1051 DNDVFLSTPLTPAIECSLNESMVEIVTSFHEQFEKIGLDCQPLTDKT--------ILVKS 1102
Query: 1269 ITVITLLAVPCI---------FGVNLSDVDLLEFLQQLADTDGSSTTPPSVL-RVLNSKA 1318
I L C F +L + + L++L T G+ P +L + S+A
Sbjct: 1103 IP--KFLTDKCTKAKKSCQDSFIKSLIETLIRSALEELTATRGTILKVPKILHKYFCSEA 1160
Query: 1319 CRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLNNSSE 1378
C AI F L E + +++ELK L FQCAHGRP+ +P+V++E ++ N +
Sbjct: 1161 CHNAIKFNKKLSLGEMSQMIKELKNCKLPFQCAHGRPSLIPIVDVEEFKNLTEEMANVKK 1220
Query: 1379 LWHGLHR 1385
+ GL +
Sbjct: 1221 I-SGLKK 1226
>gi|167765540|ref|ZP_02437604.1| hypothetical protein CLOSS21_00034 [Clostridium sp. SS2/1]
gi|167712725|gb|EDS23304.1| DNA mismatch repair domain protein [Clostridium sp. SS2/1]
Length = 645
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 179/359 (49%), Gaps = 35/359 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I L + + + +G V+ VV+ELV N+VDA A V V + ++V D+
Sbjct: 1 MAKIQLLDQKTIDNIAAGEVIERPASVVKELVENAVDAKANAVTVEIKDGGMTLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI +D + RHA TSK+ + D+ + + GFRGEAL+SIS V+ +E++TK
Sbjct: 61 GIGIPKDQVKTAFLRHA-TSKIRSVEDL---LSVSSLGFRGEALSSISAVAQVELVTKTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
+G S +Y G ++ +D+ GTT + ++LFYN P RRK+++S+ + +
Sbjct: 117 ESFSGV------SYKIYGGEEEAFEDIGAPDGTTFLVKNLFYNTPARRKFLKSATTEAGY 170
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
V++ ++ IAL HP++SFKFI + + T + ++ +G + L + A
Sbjct: 171 -VEQMMVHIALSHPEISFKFI--HNNKNKIYTSGNGKVKDIIYHIYGRDVAGALIPLEAQ 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ ++++G+++ PY S + ++ +IN RY+ I+K + +F +
Sbjct: 228 NEDVKVTGFVAKPYVSRGNRNYESYFINGRYIKSSIIYKAIEEGYRTFTMKHRY------ 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P L+ + L D+ P K + F++ + + A+R+A ++K
Sbjct: 282 -----------PFVCLDFKIDQELLDVNVHPTKMEIRFRNGREIYELVVDAVRAALLQK 329
>gi|383451382|ref|YP_005358103.1| DNA mismatch repair protein MutL [Flavobacterium indicum
GPTSA100-9]
gi|380503004|emb|CCG54046.1| DNA mismatch repair protein MutL [Flavobacterium indicum
GPTSA100-9]
Length = 619
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 174/348 (50%), Gaps = 28/348 (8%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDG 60
G I LP+ V N + +G V+ VV+ELV N+VDA AT++ + ++V+D+G
Sbjct: 3 GIIQLLPDHVANQIAAGEVVQRPASVVKELVENAVDANATEIKLIIKDAGKTLIQVIDNG 62
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
G++ L ERHA TSK+ H D+ + T GFRGEALASI+ V+ +E+ TK
Sbjct: 63 KGMNVTDARLCFERHA-TSKIRHAEDL---FALHTKGFRGEALASIAAVAHVELKTKQDQ 118
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
G +++GSK + + K GT+ + ++LF+N P RR +++S ++ H + +
Sbjct: 119 EELGTHVIIEGSKFVSQEVAVLPK--GTSFLVKNLFFNIPARRNFLKSDNVELKHIIDEF 176
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
R+AL HP + F I +E + S++ +++ FG + L VN +
Sbjct: 177 E-RVALAHPAIHFVLISNGAE---IFNLPSTNYRQRIVNIFGGKTNEKLVPVNEETEIIT 232
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
ISG++ P + ++ Q+ +N R++ +H H S A +G LK
Sbjct: 233 ISGFVGKPEFAKKNRSEQFFLVNDRFIKSSFLH----HAVMS--------AYDGLLKDGN 280
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P+Y L L+ P D+ P KT V F D + + A + A++
Sbjct: 281 Q-----PSYFLYLQVPTHTIDINIHPTKTEVKFDDEQALYAILRSAVK 323
>gi|336053623|ref|YP_004561910.1| DNA mismatch repair protein mutL [Lactobacillus kefiranofaciens
ZW3]
gi|333957000|gb|AEG39808.1| DNA mismatch repair protein mutL [Lactobacillus kefiranofaciens
ZW3]
Length = 632
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 175/364 (48%), Gaps = 36/364 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ F+ G+ V+
Sbjct: 1 MPKIHELSENLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFIDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI+RD + L RHA TSK+ + D+ + T GFRGEALASIS VS +EIIT
Sbjct: 59 DNGTGIARDQVDLAFTRHA-TSKINNEHDL---FKVATLGFRGEALASISAVSHVEIITA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G G R G G +D GT + +DLF+N P R KY++ SP+ +
Sbjct: 115 TEGAI-GVRATFSGGN--KKGQEDSAARQGTKITVKDLFFNTPARLKYLR-SPRTETMKI 170
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R++L +P VSF + + +L T + + + + +G ++E A D
Sbjct: 171 VDIINRLSLGYPHVSFTLSN--TGKVILRTTGNGNLKQTVANVYGRHIAEGMEEFQAKDS 228
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+I+G +S P + S + F + +N RY+ +++ N +
Sbjct: 229 DFKINGLMSKPSLTRSTRNFISILLNGRYI-------------------KNFQLNTAIMD 269
Query: 298 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
G SK A P +L + L D+ P K V + + I AI +A ++K+
Sbjct: 270 GYGSKLAARHYPIVVLAIHVDPLLVDVNVHPTKQEVRLSKEKELSRLITSAISNALVEKV 329
Query: 356 AHDS 359
S
Sbjct: 330 EQTS 333
>gi|423656629|ref|ZP_17631928.1| DNA mismatch repair protein mutL [Bacillus cereus VD200]
gi|401290370|gb|EJR96064.1| DNA mismatch repair protein mutL [Bacillus cereus VD200]
Length = 647
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 172/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEVDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|418172585|ref|ZP_12809199.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41277]
gi|353839284|gb|EHE19358.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41277]
Length = 649
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 205/438 (46%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + +IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISFFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|229000592|ref|ZP_04160132.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock3-17]
gi|229006014|ref|ZP_04163703.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock1-4]
gi|228755213|gb|EEM04569.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock1-4]
gi|228759147|gb|EEM08153.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock3-17]
Length = 643
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE++T
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELVTSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIMQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L + + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIRGYVTLPEVTRASRNYISTIVNGRYVRNYVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE+ ++ A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLQLIEKTLQDAFKK 327
>gi|291557074|emb|CBL34191.1| DNA mismatch repair protein MutL [Eubacterium siraeum V10Sc8a]
Length = 677
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 185/359 (51%), Gaps = 39/359 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L ++V + +G V+ + V++ELV NS+DAGA + V + G+ Y+++
Sbjct: 1 MPEIRLLDKSVAELIAAGEVIERPSSVIKELVENSIDAGARHITVEIKHGGIS--YMRIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
DDG GI+ + RHA TSK+ DD TGI T GFRGEALAS++ V+ +E++++
Sbjct: 59 DDGCGIAYAQMPTAFLRHA-TSKI---RTGDDLTGIMTMGFRGEALASVAAVAKIEMMSR 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKD----VGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
G G R +++G G + E + GTT+V ++LFYN P R K+++ +
Sbjct: 115 QDGDELGGRYIIEG------GEEKEHESCGCPTGTTIVIKELFYNTPARLKFLKKDISEG 168
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 233
+ + V R+AL HP +SF+FI + T S L+ + G + L V+
Sbjct: 169 -NFIAATVDRLALSHPDISFRFI--RDNKSVRMTSGDGSLLSAAKAVSGRQFADSLIPVD 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+ +++SGY+SSP + ++ Q ++N+RY+ K +AA ++++ N
Sbjct: 226 FSLNGIDVSGYVSSPLFCRNSRSMQTFFVNTRYI------KSTTCMAA---LEEAYR--N 274
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
+ GK PA +LN+ D+ P KT + F +PV + A+++A +
Sbjct: 275 SMMVGK------FPACILNISLSPETVDVNVHPAKTEIRFAYEKPVFDAVYFAVKNALV 327
Score = 45.4 bits (106), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 26/196 (13%)
Query: 1167 AKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVL 1226
+V+ + K +I AG L +ID+HAA ERIR E+L+ + ++ + L + EL L
Sbjct: 494 VRVIGEFLKTYILCEAGEELIIIDKHAAHERIRFEKLKEEFVT----TSQLLIDKTELKL 549
Query: 1227 PEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLS 1286
Y+ L + E ++ G + L+ + + + A+P + +
Sbjct: 550 SPEEYEALHEYYEYVEQSG----------------IELVFCDDSTVQITAMPSVVKCSPQ 593
Query: 1287 DVDLLEFLQQLADTDGSSTTPPSVL--RVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1344
++ + + Q+L +T +T L +L++ AC+ AI D E + + +
Sbjct: 594 EI-VSDVAQRLMNT---ATDQKGALFDDMLHTMACKSAIKAHDDTDILELQALADRVMND 649
Query: 1345 SLCFQCAHGRPTTVPL 1360
C HGRP L
Sbjct: 650 RTIRFCPHGRPVMTAL 665
>gi|422825318|ref|ZP_16873497.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK678]
gi|324995820|gb|EGC27731.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK678]
Length = 648
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 206/446 (46%), Gaps = 55/446 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 2 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEDAGLKSIQVTDN 61
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 62 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFIIETATE 117
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 118 AGQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 172
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 173 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 229
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 230 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 270
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 271 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ 330
Query: 355 IAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ER 408
D++ DA L S + Q+S L + L +Q D + ++
Sbjct: 331 --------DLIPDALENLAKSTVKRANKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQ 382
Query: 409 ITFQEFQKDPVELAEENTEMEFFSQP 434
++F+E + E +E E SQP
Sbjct: 383 LSFEESAEPVHEATDEKAE----SQP 404
>gi|423511801|ref|ZP_17488332.1| DNA mismatch repair protein mutL [Bacillus cereus HuA2-1]
gi|402450062|gb|EJV81896.1| DNA mismatch repair protein mutL [Bacillus cereus HuA2-1]
Length = 647
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 172/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|423598920|ref|ZP_17574920.1| DNA mismatch repair protein mutL [Bacillus cereus VD078]
gi|401237190|gb|EJR43647.1| DNA mismatch repair protein mutL [Bacillus cereus VD078]
Length = 647
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 172/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|326798889|ref|YP_004316708.1| DNA mismatch repair protein mutL [Sphingobacterium sp. 21]
gi|326549653|gb|ADZ78038.1| DNA mismatch repair protein mutL [Sphingobacterium sp. 21]
Length = 620
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 176/351 (50%), Gaps = 28/351 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+AV N + +G V+ V+EL+ N++DAGA K+ + V ++V+D+G G
Sbjct: 5 IQLLPDAVANQIAAGEVVQRPASAVKELIENAIDAGADKIQLIVKDAGKSLIQVIDNGCG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK L +D I T GFRGEA+ASI+ ++ +E+ T+ H
Sbjct: 65 MSVTDARLCFERH-ATSK---LRKAEDLFAIRTMGFRGEAMASIAAIAHVELKTRRHEDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G +++GS+ + + GT++ ++LF+N P RR +++S+P ++ H +++
Sbjct: 121 LGTCIMIEGSEI--INQEPTATPAGTSICVKNLFFNTPARRNFLKSNPVEMRHIIEE-FQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIAL HPK+ F + S+ + S +I FG L V + + ++
Sbjct: 178 RIALAHPKI---FFSLHSDGNEVFHLPSEGLKQRIIHIFGSNYNQRLVPVEESTTIINLN 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+I P + + QY ++N+R++ K P LNH A L
Sbjct: 235 GFIGKPEYAKKTRGEQYFFVNNRFI-KDP---YLNHAV--------LNAYEEIL-----P 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
S++ P Y+L + + D+ P KT + ++D + A I A++ + K
Sbjct: 278 SESYPLYVLFIEIDPAQIDVNVHPTKTEIKYQDERSIYAIIRSAVKRSLGK 328
>gi|229168508|ref|ZP_04296231.1| DNA mismatch repair protein mutL [Bacillus cereus AH621]
gi|423592289|ref|ZP_17568320.1| DNA mismatch repair protein mutL [Bacillus cereus VD048]
gi|228614914|gb|EEK72016.1| DNA mismatch repair protein mutL [Bacillus cereus AH621]
gi|401230531|gb|EJR37038.1| DNA mismatch repair protein mutL [Bacillus cereus VD048]
Length = 647
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 172/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|423488891|ref|ZP_17465573.1| DNA mismatch repair protein mutL [Bacillus cereus BtB2-4]
gi|423494616|ref|ZP_17471260.1| DNA mismatch repair protein mutL [Bacillus cereus CER057]
gi|423498593|ref|ZP_17475210.1| DNA mismatch repair protein mutL [Bacillus cereus CER074]
gi|401151677|gb|EJQ59123.1| DNA mismatch repair protein mutL [Bacillus cereus CER057]
gi|401159251|gb|EJQ66636.1| DNA mismatch repair protein mutL [Bacillus cereus CER074]
gi|402433246|gb|EJV65300.1| DNA mismatch repair protein mutL [Bacillus cereus BtB2-4]
Length = 647
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 172/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229012952|ref|ZP_04170117.1| DNA mismatch repair protein mutL [Bacillus mycoides DSM 2048]
gi|423661392|ref|ZP_17636561.1| DNA mismatch repair protein mutL [Bacillus cereus VDM022]
gi|228748206|gb|EEL98066.1| DNA mismatch repair protein mutL [Bacillus mycoides DSM 2048]
gi|401301433|gb|EJS07022.1| DNA mismatch repair protein mutL [Bacillus cereus VDM022]
Length = 647
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 172/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|210612718|ref|ZP_03289433.1| hypothetical protein CLONEX_01635 [Clostridium nexile DSM 1787]
gi|210151411|gb|EEA82419.1| hypothetical protein CLONEX_01635 [Clostridium nexile DSM 1787]
Length = 663
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 193/417 (46%), Gaps = 35/417 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ +++ELV N++DAGA+ V V + ++++ D+
Sbjct: 1 MANIQVLDQITIDKIAAGEVIERPASIIKELVENAIDAGASAVTVEIKEGGISFIRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI ++ + L RH+ TSK+ +DD T + + GFRGEAL+SI+ ++ +E+ITK
Sbjct: 61 GCGIPKEEVPLAFLRHS-TSKI---RSVDDLTTVASLGFRGEALSSIAAIAQVELITKTK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R ++G I+D GTT + +FYN P RRK++++ + H V +
Sbjct: 117 DEVTGTRYRIEGGA--EKAIEDTGAPDGTTFLVHQIFYNTPARRKFLKTPMTEASH-VSE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL HP+VS +FI+ + E L T + ++ FG + + L E N +
Sbjct: 174 LMTRLALSHPEVSIQFIN--NGQEKLHTSGNGKLKDIIYHVFGRDIANNLLETNERIDGI 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++ G+I P S + ++ +IN RYV I K + F +
Sbjct: 232 QVQGFIGKPIISRGNRNYENYFINGRYVKSNIIAKAIEDAYKDFTMQHKY---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
P L+ + D+ P K + F + + V FI A++ +
Sbjct: 282 -------PFTALHFTMDGTDLDVNVHPTKMELRFSNQQGVYNFIYNALKQTLSE--PELI 332
Query: 360 FDVDMLEDAELPLESSRFQSHQSSTHL------HSSPLKNLAKQRDHMFHKECERIT 410
V++ E E+P+++ + + + +P+ K D+ K ER+T
Sbjct: 333 PRVELPEAKEVPVKAEKIVERKQEQPMTPVREERKTPVIEEEKNLDYFMKKMRERVT 389
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 35/222 (15%)
Query: 1152 EFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGE 1211
+FF + K ++ K++ Q+ + + V L +IDQHAA ER+ L K L G
Sbjct: 459 DFFEEKLLTKKAAQEYKIIGQLFETYWLVEFHEQLYIIDQHAAHERV----LYEKTLRGM 514
Query: 1212 GKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV 1271
+ F Q I N+ Q + N ++++
Sbjct: 515 KD---------------------REFTSQYLSPPIILNLSMQEEEALNTHMDIFTNIGFE 553
Query: 1272 I--------TLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGA 1322
I + AVP +F + ++ E L QL D SS P V + S +C+ A
Sbjct: 554 IEPFGGDSYAIRAVPDNLFSIAKREL-FTEMLDQLVDGIHSSLAPDIVAEKVASMSCKAA 612
Query: 1323 IMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
+ L +E ++ EL + + C HGRPT + + E
Sbjct: 613 VKGNSRLSAAEVETLIGELLELENPYHCPHGRPTIIAMTKRE 654
>gi|229134576|ref|ZP_04263386.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST196]
gi|423669344|ref|ZP_17644373.1| DNA mismatch repair protein mutL [Bacillus cereus VDM034]
gi|423674528|ref|ZP_17649467.1| DNA mismatch repair protein mutL [Bacillus cereus VDM062]
gi|228648837|gb|EEL04862.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST196]
gi|401298471|gb|EJS04071.1| DNA mismatch repair protein mutL [Bacillus cereus VDM034]
gi|401310079|gb|EJS15412.1| DNA mismatch repair protein mutL [Bacillus cereus VDM062]
Length = 647
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 172/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|407473974|ref|YP_006788374.1| DNA mismatch repair protein MutL [Clostridium acidurici 9a]
gi|407050482|gb|AFS78527.1| DNA mismatch repair protein MutL [Clostridium acidurici 9a]
Length = 642
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 180/358 (50%), Gaps = 43/358 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I L E N + +G V+ + VV+ELV NS+DA +T + + + Y++V D+G G
Sbjct: 5 IKLLDEKTINKIAAGEVVERPSSVVKELVENSIDAQSTSITIEIISGGKKYIRVTDNGVG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
IS+ + L RH+ TSK+ + D+ + T GFRGEALASIS VS LE+ITK
Sbjct: 65 ISKKDIELAFLRHS-TSKISKVEDLG---SVNTLGFRGEALASISAVSQLEVITKTSSDL 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
+G + ++ G G+ E+ DV GTT++ R+LFYN PVR+K+++S + + +
Sbjct: 121 SGVKAIING------GVVREKLDVGCPKGTTLIVRNLFYNVPVRQKFLKSEGTEASY-IS 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSS----SSPLALLISSFGIEDFSFLDEVNA 234
V ++AL +P +SF +I + +++ T + S+ +LL SF F E N
Sbjct: 174 DIVYKLALSNPAISFNYI--KDNKQIVKTPGNGDMKSTVYSLLGKSFLDSTFELCSEAN- 230
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
++I G IS+ + ++ QY+++N RY+ I + DS++
Sbjct: 231 ---GIKIHGLISNTSFTRGNRSSQYIFVNGRYIKDENISR---------SVEDSYRT--- 275
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
S P +L+ + D+ P KT V F + + + F+ +++ +
Sbjct: 276 -----VIPSNRYPVFLIFIDIDSINLDVNVHPTKTEVRFSNKDIINKFLYNSVKDTLL 328
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 19/181 (10%)
Query: 1184 GTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKD 1243
TL +IDQHAA ERI E+ ++++ E + V Y+ Q L+LPE+ L Q + +++
Sbjct: 473 NTLYLIDQHAAHERIMYEKFKYQL---ENQDV-YI---QSLMLPEV-INLSQKEIDLVRE 524
Query: 1244 WGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGS 1303
N+ T FN + + I L VP +FG S LL+ + L D G
Sbjct: 525 -----NLSTFTKLGFN----MEEFGNNAIILRGVPLVFGNPNSKTLLLDIIDNLED--GV 573
Query: 1304 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
+ +L + AC AI D++ E ++E+L+ T F C HGRP + + N
Sbjct: 574 KSNYDLLLEKIMKLACTSAIKAKDNIEDIEIEKLMEDLELTEEPFTCPHGRPIIIEITNY 633
Query: 1364 E 1364
E
Sbjct: 634 E 634
>gi|417940630|ref|ZP_12583918.1| DNA mismatch repair protein [Streptococcus oralis SK313]
gi|343389511|gb|EGV02096.1| DNA mismatch repair protein [Streptococcus oralis SK313]
Length = 649
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 201/438 (45%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTMVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + + +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLIARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + + +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIAIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EI+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++ + AI K +
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMTLVSEAI----AKSLKE 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R E
Sbjct: 329 QTLIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSRPCQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL EE ++ F++
Sbjct: 379 DHQVELTEEGRDLTLFAK 396
>gi|392531927|ref|ZP_10279064.1| DNA mismatch repair protein [Carnobacterium maltaromaticum ATCC
35586]
Length = 707
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 190/394 (48%), Gaps = 38/394 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ + + ++++D+
Sbjct: 1 MGKIVELSEKLANQIAAGEVIERPASVVKELVENAIDAGSTQIDILIEEAGLKKIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G+GI+ D + +RH ATSK + DD I T GFRGEAL SI+ VS + + T A
Sbjct: 61 GAGIAADDVRNAFKRH-ATSK---IHSRDDLFRIRTLGFRGEALPSIASVSEITLET-AT 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G +KG + + RK GT++ +LF+N P R KY+++ + L ++
Sbjct: 116 GVGAGSYLALKGGDIVEERANPARK--GTSITVENLFFNTPARLKYVKTIQTE-LATIGD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+A+ + +V+F+ + +++L T + L +G+ + EV D
Sbjct: 173 IVNRLAMSNTQVAFRLV--HDGNQMLRTMGNGDLKQTLAGIYGVSVAKKMREVEKEDLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++ GY+S P + + + + + IN RY+ ++ N + G
Sbjct: 231 KLKGYVSLPELTRASRNYMSIMINGRYI-------------------KNYLLNKAIVAGY 271
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
RSK P L+++ L D+ P K V + ++ IE AI ++H
Sbjct: 272 RSKLMVGRFPFVCLDIQMDPLLVDVNVHPTKQEVRISKEKELMELIETAIHEC----LSH 327
Query: 358 DSFDVDMLEDAEL--PLESSRFQSHQSSTHLHSS 389
+ + LE+ P ++SRFQS Q+ L +S
Sbjct: 328 EQLIPESLENFSFKRPYDASRFQSEQTKIDLTAS 361
>gi|188586123|ref|YP_001917668.1| DNA mismatch repair protein MutL [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350810|gb|ACB85080.1| DNA mismatch repair protein MutL [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 680
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 173/350 (49%), Gaps = 31/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG IN L + + +G V+ VV+EL+ NS+DAG+ + +++ ++V+D+
Sbjct: 1 MGRINILRHEISEKIAAGEVVERPASVVKELIENSIDAGSDNIQIFLSKAGKELIRVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RHA TSK+ + D+D I T GFRGEALASI+ VS +E+ T+ H
Sbjct: 61 GLGIHPEDVELAFSRHA-TSKVNSIKDLDK---INTLGFRGEALASIAAVSKIEMNTRRH 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYM--QSSPKKVLHSV 177
G R ++ K G GT + +DLFYN P R K++ +S+ ++H +
Sbjct: 117 DSKEGTRVFLEEGKVQQRG--SAGCPPGTDIAVKDLFYNTPARLKFLSKESTEIALIHDI 174
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ + AL +P + F+ ++ +LL T + L ++ + +G + L + +
Sbjct: 175 ---INKFALANPNIRFRALN--GNKKLLQTSGRNDMLEVIANIYGYQTAKKLLPIKYSQD 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ I+GYI+ P + S +++Q ++N RYV ++F K + L
Sbjct: 230 GITITGYIAKPELTRSNRSYQTFFVNDRYV------------KSTFLSERLEKGYHTLLP 277
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
R P +L L+ P + D+ P K HV F + + + + +A+
Sbjct: 278 KHR-----YPFSILKLQVPDEILDVNVHPAKIHVRFINEKQIGNMLTKAV 322
Score = 47.0 bits (110), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 1164 LEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQE 1223
L + +V+ Q+ + + + + +IDQHAA ERI + L + S + KS + E
Sbjct: 490 LLEYRVVGQIFTTYWILESSDEIYLIDQHAAHERINYQLLMDRYRSSQLKSQQVIPYTLE 549
Query: 1224 LVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV 1283
L G L++ ++++ G Q + LL R + A+ IF
Sbjct: 550 L--DSAGITALEDNLDKLRQCGLEFEFFGQNT--------LLVRGVP----FAIKDIFDQ 595
Query: 1284 NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQ 1343
+ + DL++ L + D D T S+ +L + AC+ +I + + E +++ L +
Sbjct: 596 D-AIYDLIDQLIKHPDNDLDIT---SLEEMLITIACKKSIKANEKIGAKELKSLLKSLVE 651
Query: 1344 TSLCFQCAHGRPTTVPLV 1361
T F C HGRPT + L
Sbjct: 652 TPTPFTCPHGRPTIINLT 669
>gi|158320585|ref|YP_001513092.1| DNA mismatch repair protein [Alkaliphilus oremlandii OhILAs]
gi|158140784|gb|ABW19096.1| DNA mismatch repair protein MutL [Alkaliphilus oremlandii OhILAs]
Length = 616
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 187/370 (50%), Gaps = 39/370 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDDGSG 62
I L + N + +G V+ VV+ELV N++DA ++ + + + Y+++ D+G G
Sbjct: 5 IRLLDDLTINKIAAGEVVESPHSVVKELVENAIDAASSAIILEIQEGGKKYIRITDNGVG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + + RH+ TSK+ H+ D+ + + + GFRGEALASI+ V+ +E+IT+ G+
Sbjct: 65 IKEEYVEAAFMRHS-TSKIAHIEDL---SRVESLGFRGEALASIAAVAQVEMITRPEGQQ 120
Query: 123 NGYRKVMKGSKCLYLGIDDERK---DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G + G K ++ +K VGTT++ ++LF+N P R K+++S+ + + + +
Sbjct: 121 HGVLIHINGGK-----VETIKKVGCPVGTTIIVKNLFFNTPARLKFLKSNNGETM-KITE 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDGA 238
+ R++L +P +SFK+I+ + ++ T ++ L+ ++S F E F L + +
Sbjct: 175 IITRLSLSNPSISFKYIN---NNNIMFTTPGNNMLSQAILSVFNKETFKNLILLEDHQEG 231
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ + GYI P + Q V+IN RYV I + A + N
Sbjct: 232 MTLHGYIGQPSFVRGNRNLQIVFINGRYVKNKVISR-----AIEVAYKEKIMINK----- 281
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
P +LNL+ S+ D+ P K V F+D E V FI +AI A K+
Sbjct: 282 -------YPICILNLKIHPSVLDVNVHPAKIEVKFEDEEKVYHFILKAILKALEKQ---- 330
Query: 359 SFDVDMLEDA 368
S +MLE A
Sbjct: 331 SIVPNMLELA 340
Score = 45.1 bits (105), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 26/210 (12%)
Query: 1154 FIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGK 1213
+ S S L+ ++ Q+ +I + G++ +IDQHAA ER+ R ++ E
Sbjct: 417 IVQSSFLNSLLDRYHIVGQIFSTYIILENEGSMYLIDQHAAHERLLYNTFRQEI-KAEKV 475
Query: 1214 SVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVIT 1273
+ L A L L + Y L N + G+ +F N +++ RQ
Sbjct: 476 ASQRLLAPMVLELSKEDYMFLLNHLYIFEKLGF-------EIENFGGN-DIIIRQ----- 522
Query: 1274 LLAVPCIFG--VNLSDV-DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLL 1330
VP I G N S + ++L+ +++ D + + KAC+ AI D +
Sbjct: 523 ---VPMILGRPQNFSFIYEILDEVRKYNDVNAMFED------TIAKKACKEAIKANDKMD 573
Query: 1331 PSECALIVEELKQTSLCFQCAHGRPTTVPL 1360
E ++E+L + + C HGRP + +
Sbjct: 574 SIEIRKLIEDLSKLTPPLTCPHGRPIILAM 603
>gi|422824602|ref|ZP_16872789.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK405]
gi|422856695|ref|ZP_16903351.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1]
gi|422866535|ref|ZP_16913160.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1058]
gi|324992651|gb|EGC24572.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK405]
gi|327460054|gb|EGF06393.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1]
gi|327488644|gb|EGF20444.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1058]
Length = 688
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 206/446 (46%), Gaps = 55/446 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 42 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEDAGLKSIQVTDN 101
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 102 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFIIETATE 157
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 158 AGQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 212
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 213 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 269
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 270 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 310
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 311 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ 370
Query: 355 IAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ER 408
D++ DA L S + Q+S L + L +Q D + ++
Sbjct: 371 --------DLIPDALENLAKSTVKRANKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQ 422
Query: 409 ITFQEFQKDPVELAEENTEMEFFSQP 434
++F+E + E +E E SQP
Sbjct: 423 LSFEESAEPVHEATDEKAE----SQP 444
>gi|354806702|ref|ZP_09040183.1| DNA mismatch repair protein mutL [Lactobacillus curvatus CRL 705]
gi|354514886|gb|EHE86852.1| DNA mismatch repair protein mutL [Lactobacillus curvatus CRL 705]
Length = 649
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 177/356 (49%), Gaps = 42/356 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L E + N + +G V+ VV+EL N++DA +T++ + + ++V+D+
Sbjct: 1 MGKIHELSEILSNQIAAGEVIERPASVVKELAENAIDANSTQIDIVIEQAGLQLIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + +RHA TSK+ A D I + GFRGEALASI+ VS L I T A
Sbjct: 61 GDGIEPEDVPTAFKRHA-TSKI---ATRQDLFKIQSLGFRGEALASIASVSDLTIET-AT 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
G KG G+ +E+K GT + RDLF+N P R KY+++ + L
Sbjct: 116 ADSLGTFAHFKG------GVLEEQKTNPIRPGTAITVRDLFFNTPARLKYVKTFQTE-LA 168
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 234
+V V R+A+ HP+++F + ++D LL + ++ L I+ +G+ L V+A
Sbjct: 169 NVIDIVNRLAMSHPQIAFT---LTNDDHLLLKTAGNNDLQQTIAGIYGVTMAKQLLPVSA 225
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
D +++GY+S P + + + + V IN RY+ +++ N
Sbjct: 226 EDLDFKLTGYVSLPKLTRASRNYISVLINGRYI-------------------KNYQLNKA 266
Query: 295 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+KG SK P +LN++ L D+ P K V ++A IE+AIR
Sbjct: 267 IIKGYGSKLMVGRYPVVVLNIQMNPLLIDVNVHPTKQEVRLSKEPALMALIEKAIR 322
>gi|414084244|ref|YP_006992952.1| DNA mismatch repair MutL family protein [Carnobacterium
maltaromaticum LMA28]
gi|412997828|emb|CCO11637.1| DNA mismatch repair MutL family protein [Carnobacterium
maltaromaticum LMA28]
Length = 707
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 190/394 (48%), Gaps = 38/394 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ + + ++++D+
Sbjct: 1 MGKIVELSEKLANQIAAGEVIERPASVVKELVENAIDAGSTQIDILIEEAGLKKIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G+GI+ D + +RH ATSK + DD I T GFRGEAL SI+ VS + + T A
Sbjct: 61 GAGIAADDVRNAFKRH-ATSK---IHSRDDLFRIRTLGFRGEALPSIASVSEITLET-AT 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G +KG + + RK GT++ +LF+N P R KY+++ + L ++
Sbjct: 116 GVGAGSYLALKGGDIVEERANPARK--GTSITVENLFFNTPARLKYVKTIQTE-LATIGD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+A+ + +V+F+ + +++L T + L +G+ + EV D
Sbjct: 173 IVNRLAMSNMQVAFRLV--HDGNQMLRTMGNGDLKQTLAGIYGVSVAKKMREVEKEDLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++ GY+S P + + + + + IN RY+ ++ N + G
Sbjct: 231 KLKGYVSLPELTRASRNYMSIMINGRYI-------------------KNYLLNKAIVAGY 271
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
RSK P L+++ L D+ P K V + ++ IE AI ++H
Sbjct: 272 RSKLMVGRFPFVCLDIQMDPLLVDVNVHPTKQEVRISKEKELMELIETAIHEC----LSH 327
Query: 358 DSFDVDMLEDAEL--PLESSRFQSHQSSTHLHSS 389
+ + LE+ P ++SRFQS Q+ L +S
Sbjct: 328 EQLIPESLENFSFKRPYDASRFQSEQTKIDLTAS 361
>gi|88803291|ref|ZP_01118817.1| putative DNA mismatch repair protein [Polaribacter irgensii 23-P]
gi|88780857|gb|EAR12036.1| putative DNA mismatch repair protein [Polaribacter irgensii 23-P]
Length = 604
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 169/344 (49%), Gaps = 29/344 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGAT + + ++V+DDG G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELIENAIDAGATNIKLLLKDAGKTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERH ATSK+ D+ + T GFRGEALASI+ +S +E+ TK
Sbjct: 65 MSATDARMSFERH-ATSKIQKAEDL---FNLNTKGFRGEALASIAAISHVELKTKRSDDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++GSK + K GT+ ++LFYN P RR +++S + H + +
Sbjct: 121 LGTGIKIEGSKVISQDFISTGK--GTSFAVKNLFYNIPARRNFLKSDTVETRHIIDEF-Q 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP +SF + + + + +++ FGI+ L +N + I
Sbjct: 178 RVALAHPDISFL---LHHNNNEIYHLKEGNLRQRIVAVFGIKMNEKLVPINEKTDLVAIQ 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+I+ P S + Q+ ++N+R++ LNH S A +G L +
Sbjct: 235 GFIAKPEFSKRKRGEQFFFVNNRFIKSS----YLNHAVVS--------AFDGLL-----E 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
S A P+Y L L P + D+ P KT + F D E VL I RA
Sbjct: 278 SGAHPSYFLYLTVPANSIDINIHPTKTEIKF-DNEKVLYAILRA 320
>gi|317498493|ref|ZP_07956787.1| DNA mismatch repair protein MutL [Lachnospiraceae bacterium
5_1_63FAA]
gi|316894186|gb|EFV16374.1| DNA mismatch repair protein MutL [Lachnospiraceae bacterium
5_1_63FAA]
Length = 495
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 178/359 (49%), Gaps = 35/359 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I L + + + +G V+ VV+ELV N+VDA A V V + ++V D+
Sbjct: 1 MAKIQLLDQKTIDNIAAGEVIERPASVVKELVENAVDAKANAVTVEIKDGGMTLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI +D + RHA TSK+ + D+ + + GFRGEAL+SIS V+ +E++TK
Sbjct: 61 GIGIPKDQVKTAFLRHA-TSKIRSVEDL---LSVSSLGFRGEALSSISAVAQVELVTKTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
+G S +Y G ++ D+ GTT + ++LFYN P RRK+++S+ + +
Sbjct: 117 ESFSGV------SYKIYGGEEEAFDDIGAPDGTTFLVKNLFYNTPARRKFLKSATTEAGY 170
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
V++ ++ IAL HP++SFKFI + + T + ++ +G + L + A
Sbjct: 171 -VEQMMVHIALSHPEISFKFI--HNNKNKIYTSGNGKVKDIIYHIYGRDVAGALIPLEAQ 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ ++++G+++ PY S + ++ +IN RY+ I+K + +F +
Sbjct: 228 NEDVKVTGFVAKPYVSRGNRNYESYFINGRYIKSSIIYKAIEEGYRTFTMKHRY------ 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P L+ + L D+ P K + F++ + + A+R+A ++K
Sbjct: 282 -----------PFVCLDFKINQELLDVNVHPTKMEIRFRNGREIYELVVDAVRAALLQK 329
>gi|423469981|ref|ZP_17446725.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6O-2]
gi|402437233|gb|EJV69257.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6O-2]
Length = 648
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 171/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIRQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE ++ + K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQDTFKK 327
>gi|227357130|ref|ZP_03841499.1| DNA mismatch repair protein [Proteus mirabilis ATCC 29906]
gi|227162662|gb|EEI47629.1| DNA mismatch repair protein [Proteus mirabilis ATCC 29906]
Length = 669
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 179/365 (49%), Gaps = 32/365 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
IN LP + N + +G V+ VV+EL+ NS+DAGAT + + + +++ D+G G
Sbjct: 3 INLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
ISRD L L RHA TSK+ + +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISRDDLKLALARHA-TSKI---STLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQE 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VG+TV DLFYN P RRK++++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD---EVNANDGAL 239
RIAL VS + +S+ I F+D ++ G L
Sbjct: 177 RIALSRFDVSINLTHNGKRVRQYRAAKETHQHHRRLSA--ICGNHFVDQAMQLTWEHGDL 234
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I G++ P + QY Y+N R + +L+NH +A G+L+G+
Sbjct: 235 AIKGWVEHPLAPVQSSEIQYCYVNGRMMRD----RLINHAIR--------QAYEGYLQGE 282
Query: 300 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
+ P+Y+L L PH + D+ P K V F + V FI +A+ S ++++ D
Sbjct: 283 QQ-----PSYVLYLTVDPHQV-DVNVHPAKHEVRFHESRLVHDFIYQAVLSV-LRQVTED 335
Query: 359 SFDVD 363
+ +D
Sbjct: 336 TLSLD 340
>gi|323343300|ref|ZP_08083527.1| DNA mismatch repair protein MutL [Prevotella oralis ATCC 33269]
gi|323095119|gb|EFZ37693.1| DNA mismatch repair protein MutL [Prevotella oralis ATCC 33269]
Length = 600
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 180/382 (47%), Gaps = 32/382 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ V++ELV N+VDAGA + V V V+V+DDG+G
Sbjct: 5 IQLLPDTVANQIAAGEVIQRPASVIKELVENAVDAGARNIMVLVVDAGKTSVQVIDDGNG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSETDARLSFERHA-TSKIRKAADL---FALHTMGFRGEALASIAAVAQIELRTRLKGED 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G R + GSK ++G + G+ + +LF+N P RRK+++S+ + L+++
Sbjct: 121 IGTRLSISGSK--FMGQEPCSCPEGSNFIIENLFFNVPARRKFLKSNTTE-LNNIITSFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+P +SF ++S L + +I FG L V + I
Sbjct: 178 RIALVYPDISFV---LKSNGSELFNLKAGGLRQRIIDVFGKRLNQDLLPVEVHTTMCNIQ 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + + QY ++N RY+ H N KA G +
Sbjct: 235 GFVGKPESARKKEPRQYFFVNGRYMK----HPYFN------------KAVLGAFERLIPV 278
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
+ P Y L P D+ P KT + F++ + + + A+R A S D
Sbjct: 279 GEQVP-YFLYFDLPPEDIDVNIHPTKTEIKFENEQAIWQILSAAVREAVGLFNDVPSIDF 337
Query: 363 DMLEDAELPLESSRFQSHQSST 384
DM ++P+ F SH ++
Sbjct: 338 DMQGSPDIPV----FDSHSNAA 355
>gi|291515608|emb|CBK64818.1| DNA mismatch repair protein MutL [Alistipes shahii WAL 8301]
Length = 664
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 175/371 (47%), Gaps = 30/371 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LPE V N + +G V+ VV+E++ N++DAGAT V V + +++VDDG G
Sbjct: 5 IRLLPEVVANQIAAGEVVNRPASVVKEMMENAIDAGATSVKVNFRDGGKDLIQIVDDGCG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + +RHA TSK+G + D+ + TFGFRGEALASI+ VS +E+ T+ G
Sbjct: 65 MSPIDARMAFDRHA-TSKIGAVEDI---YALHTFGFRGEALASIAAVSQVELRTRQAGDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + + G + + + VG+ R+LFYN P RR+++ S +K
Sbjct: 121 VGTQTEINGGQ--FAAQNPVMCPVGSQFFVRNLFYNVPARRRFLDKSTTSA-SQIKAEFQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIAL +P+++F ++ + D + T + S ++ G L EV A+ I
Sbjct: 178 RIALCNPQIAF---ELYANDAPVYTLQAGSLAGRIVDVVGRHIKQNLLEVEADTSIACIE 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GYI P + QY+++N R+ +++ S KA +
Sbjct: 235 GYIGRPAAAKKRNTEQYLFVNGRF------------FKSTYLTSAILKAYEKLIP----- 277
Query: 303 SQAC-PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFD 361
++C P+Y L L D+ P KT V F D E V + A+R K A D
Sbjct: 278 -ESCQPSYFLYLTLDPGRIDVNVHPQKTEVKFADEEAVWQIVNAAVRETLAKTGAVPLMD 336
Query: 362 VDMLEDAELPL 372
D E+P+
Sbjct: 337 FDRDSPVEIPV 347
>gi|332982486|ref|YP_004463927.1| DNA mismatch repair protein MutL [Mahella australiensis 50-1 BON]
gi|332700164|gb|AEE97105.1| DNA mismatch repair protein MutL [Mahella australiensis 50-1 BON]
Length = 579
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 170/346 (49%), Gaps = 29/346 (8%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSGISR 65
L + R+ + +G V+ VV+ELV NS+DA AT + V + ++V D+G G+ R
Sbjct: 2 LDQDTRSKIAAGEVVERPASVVKELVENSIDAAATAITVEIENGGMTLIRVTDNGEGMER 61
Query: 66 DGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGY 125
+ VL ERHA TSK+ A DD I T GFRGEALASI+ VS + + T G G
Sbjct: 62 EDAVLAFERHA-TSKI---ARADDLEAIFTLGFRGEALASIAAVSKVRMETVRQGSSEGT 117
Query: 126 RKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIA 185
++G K + G+ + GT+V DLFYN P R KY++ SPK +K + R
Sbjct: 118 FVEIEGGKLISQGVIG--RPGGTSVTVSDLFYNTPARLKYVK-SPKTEASRIKDIIDRFV 174
Query: 186 LVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYI 245
L +P +SF+++ + ++L + + + + +G E + V +EI+GYI
Sbjct: 175 LGYPHLSFRYLSVGK--QVLYSPGTGHLDEAIAAVYGHETAKKMISVQYEWEGIEINGYI 232
Query: 246 SSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQA 305
SP + + +AFQ ++N RY+ + + L ++ + +
Sbjct: 233 GSPDTARANRAFQTFFVNGRYIRSPLLSRALEEAFSTLIMVNRF---------------- 276
Query: 306 CPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P ++N+ PH + D+ P KT V F D V A AI+ A
Sbjct: 277 -PMCVINITLDPHDV-DVNVHPAKTEVRFTDDRRVAAVFFHAIKRA 320
Score = 40.8 bits (94), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 20/187 (10%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L +IDQHAA ERI L E +L + + YL + L + QLL++ E ++ G
Sbjct: 410 LYIIDQHAAHERI-LYEQYMSMLQKQHLELQYLVSPLVLDITPQERQLLEDNMELLRSMG 468
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1305
+ F+ + +L+ AVP +FG ++ L + + + D S
Sbjct: 469 FEIE-------EFDSDTYVLR---------AVPVLFGRPRAEGLLKDIIDGMRLFDAHSP 512
Query: 1306 TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT--TVPLVNL 1363
V+ ACR A+ D L S+ + E+ ++ C HGRP ++ L
Sbjct: 513 YDYRREEVM-MMACRSAVKAHDHLDQSQIIRLAGEILSGNVPPTCPHGRPIVRSISKYEL 571
Query: 1364 EALHKQI 1370
E + K++
Sbjct: 572 EKMFKRV 578
>gi|225018515|ref|ZP_03707707.1| hypothetical protein CLOSTMETH_02462 [Clostridium methylpentosum
DSM 5476]
gi|224948716|gb|EEG29925.1| hypothetical protein CLOSTMETH_02462 [Clostridium methylpentosum
DSM 5476]
Length = 645
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 180/356 (50%), Gaps = 29/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
M I+ L +AV + +G V+ +V+EL+ NS+D+GAT V V + +++ D+
Sbjct: 1 MPQIHLLDKAVSELIAAGEVIERPASIVKELLENSIDSGATSVTVEIKTGGKQLIRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GIS D + RHA TSK+ D++ I T GFRGEALASI VS +E++TK
Sbjct: 61 GCGISPDDVPKAFLRHA-TSKIQTEPDLEH---IATLGFRGEALASICAVSKIELLTKTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + S +++ GTT++ R++FY+ P R K+++ + ++++
Sbjct: 117 EEQFGTRYTI--SGGEGGELEETGCPDGTTILVREIFYDVPARLKFLKKDVTEG-NAIQS 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +IAL HP++S KF + +L T + +++ + FG E S L V+ G+
Sbjct: 174 IVDKIALSHPEISIKF--LRDGKRVLNTPGNGDRFSVIHAVFGREFASTLMPVDYKAGSF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG-FLKG 298
++G+ S P S + ++ Q+ +IN RYV + C+ +A G + G
Sbjct: 232 PVNGFASVPMKSRANRSMQHFFINGRYV------------KSKTCCTALEEAYKGSIMVG 279
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
K PA +LNL P + D+ P K V F D V + A++SA ++
Sbjct: 280 K------FPACVLNLELPFEMVDVNVHPSKIEVRFTDERAVFEAVYFAVKSAIAQQ 329
>gi|423452930|ref|ZP_17429783.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5X1-1]
gi|401139489|gb|EJQ47051.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5X1-1]
Length = 648
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 171/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIRQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE ++ + K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQDTFKK 327
>gi|291559007|emb|CBL37807.1| DNA mismatch repair protein MutL [butyrate-producing bacterium
SSC/2]
Length = 645
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 178/359 (49%), Gaps = 35/359 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I L + + + +G V+ VV+ELV N+VDA A V V + ++V D+
Sbjct: 1 MAKIQLLDQKTIDNIAAGEVIERPASVVKELVENAVDAKANAVTVEIKDGGMTLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI +D + RHA TSK+ + D+ + + GFRGEAL+SIS V+ +E++TK
Sbjct: 61 GIGIPKDQVKTAFLRHA-TSKIRSVEDL---LSVSSLGFRGEALSSISAVAQVELVTKTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
+G S +Y G ++ D+ GTT + ++LFYN P RRK+++S+ + +
Sbjct: 117 ESFSGV------SYKIYGGEEEAFDDIGAPDGTTFLVKNLFYNTPARRKFLKSATTEAGY 170
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
V++ ++ IAL HP++SFKFI + + T + ++ +G + L + A
Sbjct: 171 -VEQMMVHIALSHPEISFKFI--HNNKNKIYTSGNGKVKDIIYHIYGRDVAGALIPLEAQ 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ ++++G+++ PY S + ++ +IN RY+ I+K + +F +
Sbjct: 228 NEDVKVTGFVAKPYVSRGNRNYESYFINGRYIKSSIIYKAIEEGYRTFTMKHRY------ 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P L+ + L D+ P K + F++ + + A+R+A ++K
Sbjct: 282 -----------PFVCLDFKIDQELLDVNVHPTKMEIRFRNGREIYELVVDAVRAALLQK 329
>gi|429761466|ref|ZP_19293891.1| DNA mismatch repair protein [Anaerostipes hadrus DSM 3319]
gi|429183719|gb|EKY24760.1| DNA mismatch repair protein [Anaerostipes hadrus DSM 3319]
Length = 645
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 178/359 (49%), Gaps = 35/359 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I L + + + +G V+ VV+ELV N+VDA A V V + ++V D+
Sbjct: 1 MAKIQLLDQKTIDNIAAGEVIERPASVVKELVENAVDAKANAVTVEIKDGGMTLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI +D + RHA TSK+ + D+ + + GFRGEAL+SIS V+ +E++TK
Sbjct: 61 GIGIPKDQVKTAFLRHA-TSKIRSVEDL---LSVSSLGFRGEALSSISAVAQVELVTKTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
+G S +Y G ++ D+ GTT + ++LFYN P RRK+++S+ + +
Sbjct: 117 ESFSGV------SYKIYGGEEEAFDDIGAPDGTTFLVKNLFYNTPARRKFLKSATTEAGY 170
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
V++ ++ IAL HP++SFKFI + + T + ++ +G + L + A
Sbjct: 171 -VEQMMVHIALSHPEISFKFI--HNNKNKIYTSGNGKVKDIIYHIYGRDVAGALIPLEAQ 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ ++++G+++ PY S + ++ +IN RY+ I+K + +F +
Sbjct: 228 NEDVKVTGFVAKPYVSRGNRNYESYFINGRYIKSSIIYKAIEEGYRTFTMKHRY------ 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P L+ + L D+ P K + F++ + + A+R+A ++K
Sbjct: 282 -----------PFVCLDFKIDQELLDVNVHPTKMEIRFRNGREIYELVVDAVRAALLQK 329
>gi|425074063|ref|ZP_18477168.1| DNA mismatch repair protein mutL [Proteus mirabilis WGLW4]
gi|404594474|gb|EKA95056.1| DNA mismatch repair protein mutL [Proteus mirabilis WGLW4]
Length = 669
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 179/365 (49%), Gaps = 32/365 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
IN LP + N + +G V+ VV+EL+ NS+DAGAT + + + +++ D+G G
Sbjct: 3 INLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
ISRD L L RHA TSK+ + +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISRDDLKLALARHA-TSKI---STLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQE 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VG+TV DLFYN P RRK++++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD---EVNANDGAL 239
RIAL VS + +S+ I F+D ++ G L
Sbjct: 177 RIALSRFDVSINLTHNGKRVRQYRAAKETHQHHRRLSA--ICGNHFVDQAMQLTWEHGDL 234
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I G++ P + QY Y+N R + +L+NH +A G+L+G+
Sbjct: 235 AIKGWVEHPLAPVQSSEIQYCYVNGRMMRD----RLINHAIR--------QAYEGYLQGE 282
Query: 300 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
+ P+Y+L L PH + D+ P K V F + V FI +A+ S ++++ D
Sbjct: 283 QQ-----PSYVLYLTVDPHQV-DVNVHPAKHEVRFHESRLVHDFIYQAVLSV-LRQVTED 335
Query: 359 SFDVD 363
+ +D
Sbjct: 336 TLSLD 340
>gi|383814808|ref|ZP_09970226.1| DNA mismatch repair protein [Serratia sp. M24T3]
gi|383296300|gb|EIC84616.1| DNA mismatch repair protein [Serratia sp. M24T3]
Length = 660
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 183/381 (48%), Gaps = 39/381 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IRVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
IS+D L L RHA TSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISKDELALALARHA-TSKISSL---DDLEAILSLGFRGEALASISSVSRLMLTSRTATQD 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + G+TV DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTVKPAAHPQGSTVEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFID----MESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIAL VSF M + +S LA + S+ +E EV + G
Sbjct: 177 RIALARFDVSFNLSHNGKLMRQYRAVKDPAQTSRRLASICSTTFVEHAL---EVEWSHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S ++ QY Y+N+R + +L+NH A D K +
Sbjct: 234 LAIHGWVADPAGSRNLTDMQYCYVNNRMMKD----RLINH-AIRQAYQDQLKDDQQ---- 284
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
PAY+L L PH + D+ P K V F V FI +A+ S + +
Sbjct: 285 --------PAYVLYLDVDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQAVVSVLQQAGS- 334
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
ML+ E E+ R+Q
Sbjct: 335 -----PMLDTTEPQEETPRWQ 350
>gi|87311735|ref|ZP_01093850.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645]
gi|87285519|gb|EAQ77438.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645]
Length = 637
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 172/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M TI +LP +V N + +G V+ VV+EL+ NSVDAGAT+V V + V++ D+
Sbjct: 1 MPTIRQLPTSVVNKIAAGEVIERPASVVKELMENSVDAGATRVDVTIEHGGSELVRIADN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D L L H ATSK + D DD +GT GFRGEALASI++VS + ++
Sbjct: 61 GCGIAEDQLALSVASH-ATSK---ILDADDLFHVGTLGFRGEALASIAEVSQFRLRSRIP 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ G + + + VGTT+ R+LF+N PVR+K+++++ + H + +
Sbjct: 117 ESDAAAEMYINGGQLVE--VTPCGAAVGTTIEVRNLFFNTPVRKKFLRTTQTEFGH-LSE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
RIAL P V F ++ S + L + FG E + L ++ D +
Sbjct: 174 AFTRIALAFPHVHFTL--KHGARQIYDLPPSDNWRERLAAFFGDEIATHLIPIDNADDTI 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+SGY++ P + Q++++N R++ + L+ +A G L
Sbjct: 232 RLSGYVADPKFNRGNNKMQFLFLNGRHIRDRALQHALS------------EAYRGLLLTG 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
R P L L+ P + D+ P K V F+D + + + +R+ ++
Sbjct: 280 R-----YPIAFLRLQMPPEMVDVNVHPTKLEVRFQDSGRIYSQLLGTLRTKFL 327
Score = 48.9 bits (115), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 19/188 (10%)
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1231
Q+ ++++ + VIDQHA ERI EE R K L+G ++ Q L+ PE +
Sbjct: 454 QLHRRYLVTETPEGMVVIDQHALHERILYEEFREKALAGRLET-------QNLLAPETMH 506
Query: 1232 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1291
F+ ++ + + Q SF + I + + P I L
Sbjct: 507 LSPSEFSAVMQAQEPLAQLGFQ-VESFGGD---------TILISSYPAILDRRKPSETLR 556
Query: 1292 EFLQQLADTDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1350
E + L DG +L +L+ +C+ A+ GD L E ++E C
Sbjct: 557 EIIDHLVG-DGKRPDRRDLLDELLHMMSCKAAVKAGDRLSAEEIDALLELRHLCQDAHHC 615
Query: 1351 AHGRPTTV 1358
HGRPT++
Sbjct: 616 PHGRPTSL 623
>gi|160880512|ref|YP_001559480.1| DNA mismatch repair protein MutL [Clostridium phytofermentans ISDg]
gi|160429178|gb|ABX42741.1| DNA mismatch repair protein MutL [Clostridium phytofermentans ISDg]
Length = 695
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 173/357 (48%), Gaps = 37/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L ++ N + +G V+ VV+EL+ N++DAGAT V + G+ ++++
Sbjct: 1 MAKIALLDQSTINQIAAGEVVERPASVVKELIENAIDAGATAVTAEIKDGGIS--FIRIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI +D + RH+ TSK+ ++D IG+ GFRGEAL+SI+ V+ +E++TK
Sbjct: 59 DNGAGIEKDDIPTAFLRHS-TSKI---QSIEDLLTIGSLGFRGEALSSIASVAQVELVTK 114
Query: 118 AHGRPNGYRKVMKGSK---CLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G R +++G + +G D GTT + R+LF+N P RRK+++S+ +
Sbjct: 115 TRTAFTGIRYLIEGGEEQSMTEIGCPD-----GTTFIVRNLFFNTPARRKFLKSAMTEAS 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
+ + + R+A+ HP +SFKFI+ + +L T +S ++ +G + + V
Sbjct: 170 Y-ISDLMERLAVSHPDISFKFIN--NNKTVLHTFGNSQLKDIIYHVYGRTIAAEVVTVEN 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
+ + ISGYI P S + ++ +IN RY+ I+K + + +
Sbjct: 227 GNEHISISGYIGKPIISRGNRNYENYFINGRYIKSNIINKAIEEAYRPYSMQHKY----- 281
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P ++ D+ P K V F ++E + IR A
Sbjct: 282 ------------PFTAIHFSINPEFIDVNVHPTKMEVRFHNFEELYQLTLNTIRDAL 326
Score = 45.1 bits (105), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 30/212 (14%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
+++ + A+++ Q K + + L +IDQHAA E++ E ++ E S
Sbjct: 499 LSEEGIRQARIIGQAFKTYWFIELENQLYIIDQHAAHEKVLYESTMKRLKEKETMS---- 554
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVI-----T 1273
Q+L P I L N E+ + ++ + L++L +I
Sbjct: 555 ---QQLCPPVI---LTLNLREE------------EAIKTHREFLSMLGFEIEPFGGKEYA 596
Query: 1274 LLAVPC-IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPS 1332
+ AVP +FG+ + L+EF+ L + + S TP +L + S +C+ A+ +L
Sbjct: 597 VSAVPADMFGL-AGERLLIEFIDDLVE-EISRGTPDVILEKIASLSCKAAVKGNYNLSVE 654
Query: 1333 ECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
E ++++L F C HGRP + + E
Sbjct: 655 EANELLKQLLTLENPFHCPHGRPIIISMTKYE 686
>gi|408370454|ref|ZP_11168231.1| DNA mismatch repair protein MutL [Galbibacter sp. ck-I2-15]
gi|407744212|gb|EKF55782.1| DNA mismatch repair protein MutL [Galbibacter sp. ck-I2-15]
Length = 614
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 175/349 (50%), Gaps = 34/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+ELV N+VDAG+T + + G ++VVD+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELVENAVDAGSTVIQLIIKGAGKTLIQVVDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S ++L +RHA TSK+ +D + T GFRGEALASI+ ++ LEI T+
Sbjct: 65 MSERDMLLSVQRHA-TSKI---RTAEDLFQLHTKGFRGEALASIAAIAHLEISTREEDNE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERK---DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + ++GS I+D + + GT++ ++LF+N P RR +++S ++ H + +
Sbjct: 121 VGIQLKIEGST-----INDPKPIACEKGTSIAVKNLFFNIPARRNFLKSDTVELRHIIDE 175
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
RIAL HP + F F SE L S+ +++ FG + L + + +
Sbjct: 176 F-HRIALAHPDIHFDFFHNNSE---LFKLPPSNLRQRIVNVFGGKTNEKLVPIKEDTDVV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+I+G+IS P + + Q+ ++N+R+V +H H +S A G LK
Sbjct: 232 KINGFISKPAFTKKTRGQQFFFVNNRFVKNSYLH----HAVSS--------AFEGLLKPG 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P Y + L S D+ P KT V F + + + A + ++
Sbjct: 280 HH-----PGYFIFLEVDPSSIDINIHPTKTEVKFDEDQAMYAILRSTVK 323
>gi|425070242|ref|ZP_18473356.1| DNA mismatch repair protein mutL [Proteus mirabilis WGLW6]
gi|404595508|gb|EKA96048.1| DNA mismatch repair protein mutL [Proteus mirabilis WGLW6]
Length = 669
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 179/365 (49%), Gaps = 32/365 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
IN LP + N + +G V+ VV+EL+ NS+DAGAT + + + +++ D+G G
Sbjct: 3 INLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
ISRD L L RHA TSK+ + +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISRDDLKLALARHA-TSKI---STLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQE 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VG+TV DLFYN P RRK++++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD---EVNANDGAL 239
RIAL VS + +S+ I F+D ++ G L
Sbjct: 177 RIALSRFDVSINLTHNGKRVRQYRAAKETHQHHRRLSA--ICGNHFVDQAMQLTWEHGDL 234
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I G++ P + QY Y+N R + +L+NH +A G+L+G+
Sbjct: 235 AIKGWVEHPLAPVQSSEVQYCYVNGRMMRD----RLINHAIR--------QAYEGYLQGE 282
Query: 300 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
+ P+Y+L L PH + D+ P K V F + V FI +A+ S ++++ D
Sbjct: 283 QQ-----PSYVLYLTVDPHQV-DVNVHPAKHEVRFHESRLVHDFIYQAVLSV-LRQVTED 335
Query: 359 SFDVD 363
+ +D
Sbjct: 336 TLSLD 340
>gi|332654853|ref|ZP_08420595.1| DNA mismatch repair protein HexB [Ruminococcaceae bacterium D16]
gi|332516196|gb|EGJ45804.1| DNA mismatch repair protein HexB [Ruminococcaceae bacterium D16]
Length = 678
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 176/354 (49%), Gaps = 35/354 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M TI L V + + +G V+ V +EL+ N++DAGA+KV V + +++V DD
Sbjct: 5 MPTIQVLDSHVADLIAAGEVVERPASVAKELMENAIDAGASKVTVEISHGGLTFLRVTDD 64
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI L RHA TSKL D++ IGT GFRGEALA+IS VS +E++T+
Sbjct: 65 GKGIPAGELKTAFLRHA-TSKLRTAYDLE---AIGTLGFRGEALAAISAVSRVEVMTRTA 120
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
P G ++G G+ E ++ +GTT+V RDLFYN P R K+M+ +
Sbjct: 121 DAPLGASLSLEG------GVPGEIEEAGCPLGTTMVVRDLFYNTPARLKFMKKDSAEG-A 173
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
+V V R+AL HP+VS KFI + + ELL T + + + + G E EV +
Sbjct: 174 AVFAVVQRVALSHPEVSVKFI-RDGKQELL-TPGDGALQSAVYAVLGRELALGFREVKSG 231
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
++++G++S P + + +Q+ ++N R V +LL +AA + K F
Sbjct: 232 GDGIKVTGFVSQPACCRASRNWQFFFVNGRQVKS----RLL--MAALEQAYQNQKMVGKF 285
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
PA +L++ S D+ P KT V F V + A+ S
Sbjct: 286 -----------PACVLHVEVKLSQVDVNVHPAKTEVKFGSEREVFNAVYHAVLS 328
>gi|336065175|ref|YP_004560034.1| DNA mismatch repair protein [Streptococcus pasteurianus ATCC 43144]
gi|334283375|dbj|BAK30948.1| DNA mismatch repair protein [Streptococcus pasteurianus ATCC 43144]
Length = 640
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 173/356 (48%), Gaps = 43/356 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI++D + L RH ATSK+ + AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 61 GEGIAQDDVALSLHRH-ATSKIKNQADL---FRIRTLGFRGEAIPSIASISHFTVKTATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
+G V KG + E+++ VGT + +LFYN P R KYM+S ++
Sbjct: 117 DENHGTLLVAKGGEI-------EKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F I+ + + T S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFSLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
D E+SGYIS P + + + + + IN RY+ ++ N
Sbjct: 226 NADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNR 266
Query: 294 GFLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
L G SK P +++++ L D+ P K V + +++ I AI
Sbjct: 267 AILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMSLISSAI 322
>gi|336434948|ref|ZP_08614667.1| hypothetical protein HMPREF0988_00252 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336002356|gb|EGN32467.1| hypothetical protein HMPREF0988_00252 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 706
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 182/374 (48%), Gaps = 39/374 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ +V+EL N++DAGA V V + G+ +++
Sbjct: 1 MAHIKVLDQITIDKIAAGEVIERPASIVKELTENAIDAGADSVTVEIEDGGIT--LIRIS 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+GSGI R+ + RH+ TSK+ +DD I + GFRGEAL+SI+ V+ +E+ITK
Sbjct: 59 DNGSGIEREDIHNAFLRHS-TSKI---ESVDDLMHISSLGFRGEALSSIAAVTKVELITK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G R V++G K + ++D GTT + R LFYN P RRK++++ + H V
Sbjct: 115 PKEDTFGTRYVIEGGK--EISMEDTGASDGTTFLVRQLFYNVPARRKFLKTPMTEAGH-V 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ + R+AL HP+V+ +F++ + E L T S ++ S +G E + + E++
Sbjct: 172 QDLLTRLALSHPEVAIRFVN--NGQEKLRTSGSGKLKEVIYSIYGRETAANILELDYEKN 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ I G+I P + + F+ +++N RYV I K A+ D + + F
Sbjct: 230 GIGIRGFIGKPIITRGNRNFENIFVNGRYVKSAVISK------AAEDAYKDFMMQHKF-- 281
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
P ++L+ D+ P K + F+ ++A+ A + I
Sbjct: 282 ---------PFFVLHFLVDGETVDVNVHPTKMELRFQK--------QQAVYDAVFEAIHR 324
Query: 358 DSFDVDMLEDAELP 371
D +++ LP
Sbjct: 325 RLLDQELIPQVTLP 338
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 19/176 (10%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L +IDQHAA ER+ E ++ + E S YL L L ++L ++ G
Sbjct: 536 LYIIDQHAAHERVLYERTLKEMKTREFTS-QYLSPPIILNLSMQEAEVLNTHKDRFAQLG 594
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLSDVDLLEFLQQLADTDGSS 1304
+ I G ++ + AVP +FG+ ++ LLE L L+D +S
Sbjct: 595 F--EIEEFGGEAY--------------AVRAVPANLFGIAKKEL-LLEMLDALSDGLNTS 637
Query: 1305 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1360
TP + + S +C+ A+ + L E ++ EL + C HGRPT + +
Sbjct: 638 MTPDLIDEKVASMSCKAAVKGNNRLSAREVDTLIGELLLLDNPYHCPHGRPTIIAM 693
>gi|197287175|ref|YP_002153047.1| DNA mismatch repair protein [Proteus mirabilis HI4320]
gi|238690089|sp|B4F203.1|MUTL_PROMH RecName: Full=DNA mismatch repair protein MutL
gi|194684662|emb|CAR46598.1| DNA mismatch repair protein [Proteus mirabilis HI4320]
Length = 669
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 179/365 (49%), Gaps = 32/365 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
IN LP + N + +G V+ VV+EL+ NS+DAGAT + + + +++ D+G G
Sbjct: 3 INLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
ISRD L L RHA TSK+ + +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISRDDLKLALARHA-TSKI---STLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQE 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VG+TV DLFYN P RRK++++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD---EVNANDGAL 239
RIAL VS + +S+ I F+D ++ G L
Sbjct: 177 RIALSRFDVSINLTHNGKRVRQYRAAKETHQHHRRLSA--ICGNHFVDQAMQLTWEHGDL 234
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I G++ P + QY Y+N R + +L+NH +A G+L+G+
Sbjct: 235 AIKGWVEHPLAPVQGSEIQYCYVNGRMMRD----RLINHAIR--------QAYEGYLQGE 282
Query: 300 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
+ P+Y+L L PH + D+ P K V F + V FI +A+ S ++++ D
Sbjct: 283 QQ-----PSYVLYLTVDPHQV-DVNVHPAKHEVRFHESRLVHDFIYQAVLSV-LRQVTED 335
Query: 359 SFDVD 363
+ +D
Sbjct: 336 TLSLD 340
>gi|291522252|emb|CBK80545.1| DNA mismatch repair protein MutL [Coprococcus catus GD/7]
Length = 698
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 172/355 (48%), Gaps = 37/355 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M +I+ L N + +G V+ + V++ELV N++DA A+ + + + G+ ++V
Sbjct: 1 MKSIHLLDSDTINKIAAGEVVERPSSVIKELVENAIDAKASAITIEIKEGGIA--MMRVT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI RD + RHA TSK+ D+ +G+ GFRGEAL+SI+ VS +E+ITK
Sbjct: 59 DNGGGIDRDDIKTAFVRHA-TSKIETAMDL---MTVGSLGFRGEALSSIASVSQIELITK 114
Query: 118 AHGRPNGYRKVMKGSK---CLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
H G R + G + C +G D GTT++ R+LFYN P RRK+++++ +
Sbjct: 115 VHRELLGVRYCIDGGEEKSCDDIGCPD-----GTTIIVRNLFYNTPARRKFLKTAATEAA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
+ + R+AL HP VSFKFI+ + L T + + ++ +G + L EV+
Sbjct: 170 Y-INDLAGRLALSHPDVSFKFIN--NNQNRLHTSGNGNLRDIIYQIYGRDVTGQLLEVDV 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
++G+I P S ++++ +IN RY+ I K + +F +
Sbjct: 227 QGKLCHVTGFIGKPILSRGNRSWENYFINGRYIKSNIITKAIEDAYKTFVMIHKY----- 281
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
P ++ +L D+ P K + F E V I IR+
Sbjct: 282 ------------PFTAFHIEVDPALIDVNVHPRKMELRFNQNEAVYQEIYDIIRA 324
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 28/202 (13%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
+++ QV + V G L +IDQHAA E++ E+L K S + L L L
Sbjct: 510 RLIGQVFDTYWMVEYDGKLFIIDQHAAHEKVLYEKLM-KAFSQKALQKQMLSPPVILTLS 568
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLS 1286
+ + +A+ + G+ I G R + + VP +FG+N
Sbjct: 569 MQEENIYKQYADYFAELGF--EIELFGGREY--------------AVRGVPLQLFGMNAR 612
Query: 1287 DVDLLEFLQQLAD----TDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELK 1342
D+ +E L + + DGS+ T + + AC+ A+ + L E ++E+L
Sbjct: 613 DI-FIEVLDSVTEESRRLDGSAITDH-----IATMACKAAVKGNNKLSFKEADTLIEQLL 666
Query: 1343 QTSLCFQCAHGRPTTVPLVNLE 1364
Q + C HGRPT + L E
Sbjct: 667 QAKNPYTCPHGRPTIISLSKYE 688
>gi|320105858|ref|YP_004181448.1| DNA mismatch repair protein MutL [Terriglobus saanensis SP1PR4]
gi|319924379|gb|ADV81454.1| DNA mismatch repair protein MutL [Terriglobus saanensis SP1PR4]
Length = 655
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 176/389 (45%), Gaps = 51/389 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I L + V N + +G V+ VV+EL+ N+VDAGAT++ V V +++ D+
Sbjct: 1 MGRIRVLSDQVANQIAAGEVVERPASVVKELLENAVDAGATRIRVDVEAGGRKLIRIEDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSG+ RD +L ERHA TSKL + +D I T GFRGEAL SI+ V+ +E+ T+A
Sbjct: 61 GSGMVRDDAMLAFERHA-TSKL---RNSEDLLSISTLGFRGEALPSIASVARVEMETRAA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G L ++D + VGTT+ RDLF+N P R+K+M+S ++ H V
Sbjct: 117 EDEVGTRIEISGGNMLR--VEDIGRPVGTTLAIRDLFFNTPARKKFMKSESTELSH-VAA 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIE------------DFS 227
V AL HP+ F+ + LL + L FG E DFS
Sbjct: 174 LVTHYALAHPEKHFEL--HTTTHALLVAPAVRDAGERLFQIFGAETHKAMIPAVAEVDFS 231
Query: 228 FL------------DEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKL 275
+ D G L + G++S P + Y ++N R V KL
Sbjct: 232 RVGVPEPPPWKRGEDYEAPAPGFLRVHGFVSKPELQKLNRNSMYFFVNGRQVRD----KL 287
Query: 276 LNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD 335
+ H A + + F P LL L P D+ P KT V F+
Sbjct: 288 ILH--AMGEAYRNVIPPTSF-----------PVVLLFLEMPPQEVDVNVHPAKTEVRFRQ 334
Query: 336 WEPVLAFIERAIRSAWMKKIAHDSFDVDM 364
V F+ +R+A MK SF + +
Sbjct: 335 SAFVHDFVRDTVRNAVMKARPVASFAMAL 363
>gi|257870588|ref|ZP_05650241.1| DNA mismatch repair protein [Enterococcus gallinarum EG2]
gi|257804752|gb|EEV33574.1| DNA mismatch repair protein [Enterococcus gallinarum EG2]
Length = 710
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 165/332 (49%), Gaps = 36/332 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I L E + N + +G V+ VV+ELV N+VDAG+T++ +++ ++V+D+
Sbjct: 1 MGKIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + +V +RH ATSK + + DD I T GFRGEAL SI+ VS+L I T
Sbjct: 61 GEGIAEEDVVTAFKRH-ATSK---IHNRDDLFRIRTLGFRGEALPSIASVSILTIETAVK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +KG + R+ GT + +LFYN P R KY+++ + L ++
Sbjct: 117 DASQGSFLRLKGGTVEEHIPANLRQ--GTKITVENLFYNTPARLKYVKTLQTE-LANIGD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIAL HP+V+F+ + +++L T S + +G+E + +N+ D
Sbjct: 174 IVNRIALSHPEVAFRLV--HEGNKMLTTTGSGDLKQTIAGIYGVETAKKMLAINSEDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+++GY+S P + + + + IN RY+ ++ N + G
Sbjct: 232 KLTGYVSLPEVTRASRNYLSTIINGRYI-------------------RNFALNKAIVAGY 272
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHV 331
SK L+ R P ++ ++T DPL V
Sbjct: 273 GSK-------LMVGRFPIAVLEITMDPLLVDV 297
>gi|118581367|ref|YP_902617.1| DNA mismatch repair protein [Pelobacter propionicus DSM 2379]
gi|166232100|sp|A1AT89.1|MUTL_PELPD RecName: Full=DNA mismatch repair protein MutL
gi|118504077|gb|ABL00560.1| DNA mismatch repair protein MutL [Pelobacter propionicus DSM 2379]
Length = 608
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 173/360 (48%), Gaps = 39/360 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LPE + N + +G V+ V++EL+ NS+DAGAT + V + +++ D+G G
Sbjct: 5 IAILPEIITNKIAAGEVVERPASVIKELIENSLDAGATDISVEIAAGGRRLIRITDNGHG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+SR+ +L ERHA TSK+ D+D GI T GFRGEAL S++ VS L + ++ P
Sbjct: 65 MSREDALLSLERHA-TSKIRSDNDLD---GIHTLGFRGEALPSVASVSRLRLSSRETDSP 120
Query: 123 NGYRKVMKGSKCLYLGIDDERK---DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +++G K + D R GT + +F+N P R K+++S+ + H V
Sbjct: 121 EGTEIIVEGGK-----VRDVRACGMAPGTVISVEQIFFNTPARLKFLRSAETEAGH-VGD 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
C+ R+A+ P V+F S+ L L L + G + L E++ + +
Sbjct: 175 CLTRMAISRPDVAFS---CSSDGRDLLRVQRGDLLRRLSQALGKGTAASLHELHLSRDGI 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ISGYISSP S + + YIN R++ K++ H +A G +
Sbjct: 232 DISGYISSPAACRSTTSAMFTYINGRFIRD----KVIQHAI--------MQAYRGVMDRG 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-----RSAWMKK 354
R P L ++ P + D+ P K V F+ V ++ A+ RS W+ +
Sbjct: 280 R-----YPVVALFIQLPPAEVDVNVHPTKHEVRFRRQSLVHDTLQSALEELLKRSPWLPR 334
Score = 42.0 bits (97), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 29/209 (13%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
+++ Q ++I +G L +IDQHAA ER+ ++LRH+ + +S Q L+ P
Sbjct: 421 RIIGQFHDEYILCQSGDQLVIIDQHAASERVAFQKLRHQFDTDGVES-------QRLLFP 473
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI-----TVITLLAVPCIFG 1282
E L +F+E +R F L + ++ + + A+P +
Sbjct: 474 E---TLELSFSE------------ADTARRFGNELARIGFELEPFGGNTVIVSAIPRLAI 518
Query: 1283 VNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELK 1342
+ + + L +L SS S +L+ AC + L + ++ +
Sbjct: 519 ARDASGLIRDLLAELTQLGASSAFLDSRDALLSRIACHSVVRGVHRLEERQIRELLHGMD 578
Query: 1343 QTSLCFQCAHGRPTT--VPLVNLEALHKQ 1369
T C HGRP + + L LE + K+
Sbjct: 579 GTDFAASCPHGRPVSHVITLGELERIFKR 607
>gi|353240970|emb|CCA72812.1| hypothetical protein PIIN_06748 [Piriformospora indica DSM 11827]
Length = 629
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 172/367 (46%), Gaps = 41/367 (11%)
Query: 11 VRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVL 70
R+ +RS +L L++++ ELV N++DA AT++ + V +V D+G GIS+DG+ +
Sbjct: 16 TRSKLRSTQILTSLSQIISELVQNALDADATEIHAAINVAEWECRVQDNGVGISKDGMKI 75
Query: 71 LGERHAATSKLGHLA-----DMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGY 125
L A S G A ++ + TFGFRGEALAS +DV LEI ++ + +
Sbjct: 76 L----AGGSSTGRYASSKAYSINSLNSVSTFGFRGEALASAADVCYLEISSRTKTLKDTW 131
Query: 126 RKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 183
++KG K LY G I +R GT V RD FYN PVRRK S K L +VK+ +
Sbjct: 132 SVILKGGKQLYYGPAIHWKRISHGTMVCIRDAFYNLPVRRKS-HPSQAKTLETVKQDLRT 190
Query: 184 IALVHPKVSFKFIDM------ESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
AL+ P V F D+ + +++ S S L + FG + + V+
Sbjct: 191 FALLFPHVQFVLEDLSETSTKQHRGKVITIQKSPSTLDAFRAMFGNSLAANVHIVHEGGD 250
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+I G+I + KA+QY+++N R P+ L C +S N ++
Sbjct: 251 GCKIGGFIG--LEGTVSKAYQYLFLNKR-----PLEDL---------CDESPTKPN--IR 292
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS-----AWM 352
K P Y+L+++ D P KT + + + + RAI + +M
Sbjct: 293 RSPRKLDKRPIYVLHIQTSQKAVDALLQPSKTVMYLANLNDIENMLTRAINTFLQDNGYM 352
Query: 353 KKIAHDS 359
K A S
Sbjct: 353 TKAAKHS 359
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 1164 LEDAKVLQQVDKKFIPVVAG------GTLAVIDQHAADERIRLEELRHKVLSG 1210
L A+VL QVD KF+ + L +IDQHA DERIR+E+L + SG
Sbjct: 494 LAAAEVLGQVDCKFVACITAKKPELDSVLVLIDQHAMDERIRVEKLLAEFFSG 546
>gi|312143590|ref|YP_003995036.1| DNA mismatch repair protein MutL [Halanaerobium hydrogeniformans]
gi|311904241|gb|ADQ14682.1| DNA mismatch repair protein MutL [Halanaerobium hydrogeniformans]
Length = 612
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 204/426 (47%), Gaps = 44/426 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
MG I +LP+ V N + +G V+ +V+EL+ NS+DAGA + V V ++KV DD
Sbjct: 1 MGEIKQLPQNVANQISAGEVVERPASIVKELIENSIDAGAKNIEVRVKEGGKKFIKVKDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + R+A TSK+ D+DD + + GFRGEALASI+ V+ +E++++
Sbjct: 61 GHGILPEDIKAAFNRYA-TSKI---KDIDDLYSLYSLGFRGEALASIASVAEVEMLSRHK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERK----DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
+ NG + +KG + + E K +GT V RDLFYN P R KY++++ + H
Sbjct: 117 SKENGVKIRLKGGEVI------ENKPAASTIGTEVKVRDLFYNTPARYKYLKTTSTEFSH 170
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
+ + V A+ + ++SFK + +LL T + + + +G E L ++
Sbjct: 171 II-RIVNAEAVANNEISFKL--YHNNKQLLSTPGNGKLKDCIYALYGEEIADNLLAIDIE 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
D +++SGYI+ P + + ++ + + N R PIH N+LAA N +
Sbjct: 228 DRYIKLSGYIARPEKTRAGRSHELFFANGR-----PIH---NNLAAK-------AVENAY 272
Query: 296 LK----GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
K G++ P L ++ L D+ P K V F + + I + +R
Sbjct: 273 SKLIDPGRK------PIVFLFIKINPILVDVNVHPTKKEVKFSRSQIIYDVISKGVRKTL 326
Query: 352 MKKIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITF 411
++ D++ E + ++ LKN++ Q+ +M + + +
Sbjct: 327 KAADPTTRIKLNSSNDSK-DNEVNTAPVYEKQVFKEQGRLKNISDQKKNMPFNKSRKHSA 385
Query: 412 QEFQKD 417
+E QK+
Sbjct: 386 EELQKN 391
Score = 45.4 bits (106), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 1160 NKSCLEDA-KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
NKS ED K L Q+ ++ + L +IDQH A ERI E+L +K + + L
Sbjct: 417 NKSAKEDKFKFLAQIFNSYLLIETPEGLKIIDQHNAHERILYEKL-YKEYDEKNTATQSL 475
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
++ L QL+ + + ++ G + F KN L+Q VP
Sbjct: 476 LIPVKIELTAEEKQLVDEYKQSFQELGIDFS-------EFGKNTILIQE---------VP 519
Query: 1279 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR-VLNSKACRGAIMFGDSLLPSECALI 1337
+ N S +++E L +G + + + + ++ ACR A+ G L E I
Sbjct: 520 VLLK-NKSTRNIIEELIAELAEEGKTKSAAEMQKTMIEYLACRTAVKAGQPLNNQESLRI 578
Query: 1338 VEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQ 1372
++EL ++ ++C H RP + ++ E + K I +
Sbjct: 579 IKELFESENPYRCPHSRPVMIN-ISREEIEKGIGR 612
>gi|14577936|gb|AAK68861.1| HexB [Lactococcus lactis]
Length = 323
Score = 136 bits (342), Expect = 9e-29, Method: Composition-based stats.
Identities = 103/350 (29%), Positives = 173/350 (49%), Gaps = 31/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPATVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ ++ + L RH ATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRH-ATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G + V KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 117 EEESGTKLVAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D
Sbjct: 174 IINRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK-- 297
E++GY+S P + + + + + IN R++ ++ N L+
Sbjct: 232 ELTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGY 272
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G R P +L+++ +L D+ P K V ++A I +AI
Sbjct: 273 GNRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAI 322
>gi|340397921|ref|YP_004726946.1| DNA mismatch repair protein mutL [Streptococcus salivarius CCHSS3]
gi|338741914|emb|CCB92419.1| DNA mismatch repair protein mutL [Streptococcus salivarius CCHSS3]
Length = 645
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 177/354 (50%), Gaps = 39/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L E + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELSEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+++ + + RHA TSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 61 GEGMAQADVAMSLRRHA-TSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAAD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G G + V KG + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 117 GEAYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 226 NSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD--------- 270
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G+ G + P +++++ L D+ P K V + ++A I AI
Sbjct: 271 GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|377576924|ref|ZP_09805907.1| DNA mismatch repair protein MutL [Escherichia hermannii NBRC
105704]
gi|377541452|dbj|GAB51072.1| DNA mismatch repair protein MutL [Escherichia hermannii NBRC
105704]
Length = 622
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 184/381 (48%), Gaps = 38/381 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I++D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 INKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + +
Sbjct: 119 EAWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEIIR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 238
RIAL V+ I++ +L+ P A G I +FL++ + G
Sbjct: 177 RIALARFDVT---INLSHNGKLIRQYRGVQPNAPKERRLGAICGTAFLEQALTIEWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L + G+++ P S + QY Y+N R + +L+NH A C D +
Sbjct: 234 LALHGWVAEPKASAGLSEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGVDQQ---- 284
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
PAY+L L PH + D+ P K V F V FI + + S ++ A
Sbjct: 285 --------PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQQAE 335
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+ + E+ E+ R+Q
Sbjct: 336 PTLPLGKAEE-----EAVRWQ 351
>gi|153657|gb|AAA88600.1| mismatch repair protein [Streptococcus pneumoniae]
Length = 649
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 205/438 (46%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ V +ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVCKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|255280935|ref|ZP_05345490.1| DNA mismatch repair protein MutL [Bryantella formatexigens DSM
14469]
gi|255268383|gb|EET61588.1| DNA mismatch repair domain protein [Marvinbryantia formatexigens
DSM 14469]
Length = 743
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 174/356 (48%), Gaps = 37/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L E + + +G V+ +V+ELV N++DAGA V V + G+ +++
Sbjct: 1 MREIAVLDEQTIDKIAAGEVIERPASIVKELVENAIDAGANAVTVEIKDGGIS--LIRIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+GSGI + + RHA TSK+ D+ D T + GFRGEAL+SI+ V +E+ITK
Sbjct: 59 DNGSGIEAKQVPVAFWRHA-TSKIRKADDLLDVT---SLGFRGEALSSIAAVCQVELITK 114
Query: 118 AHGRPNGYRKVMKGSKCLYL---GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G R +++G K L G D GTT + R++FYN P R+K+++++ +
Sbjct: 115 TADSLTGVRYLIEGGKEKSLEEIGAPD-----GTTFLVRNIFYNTPARKKFLKTAQTEAG 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
+ + V RIAL HP+VSFKFI + L T + ++ +G + + L E++A
Sbjct: 170 Y-ISDMVERIALSHPEVSFKFI--ANNQTKLHTSGNHQLKDIIYHIYGRDIAANLIEISA 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
++ I+G+I P S + ++ ++N RY+ I K + +F +
Sbjct: 227 GTDSVRINGFIGKPVISRGNRNYENYFVNGRYIRSNIIAKAIEDAYHTFMMKHKY----- 281
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P +LN L D+ P K + F + E + + A+R+A
Sbjct: 282 ------------PFTVLNFTIDGKLLDVNVHPAKLELRFAENEEMYRIVYEAVRNA 325
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 30/283 (10%)
Query: 1094 LSLCPHAHL-GAQAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGE 1152
L+L P A + G + SG + P T N + + N + +TGE
Sbjct: 478 LNLQPEAGMSGNPMQAEEAASGNSAQPEAP-ATGNPVQAEKSASGNSAQPEAPAAGVTGE 536
Query: 1153 ---FFIPDSI-NKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVL 1208
F D + +K +++ +++ QV + V L +IDQHAA E++ E ++ +
Sbjct: 537 QMSLFEDDKLLSKEHVKEHRIIGQVFDTYWIVQFKDKLFLIDQHAAHEKVLYERMKKSME 596
Query: 1209 SGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQ 1268
E S L+ L L +LL+ + E+ ++ G+ I G R +
Sbjct: 597 KREFTS-QLLNPPVILTLSMAEEELLKKYQERFREIGF--EIEEFGGREY---------- 643
Query: 1269 ITVITLLAVP-CIFGVNLSDVDL-LEFLQQL-ADTDGSSTTPPSVLRVLNSKACRGAIMF 1325
L AVP +FG L+D DL LE L L A TD S ++ + + +C+ A+
Sbjct: 644 ----ALRAVPDNLFG--LADKDLFLEMLDGLSAQTDALSIE--TIDDKIATMSCKAAVKG 695
Query: 1326 GDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHK 1368
L +E +++EL + C HGRPT + + E K
Sbjct: 696 NSRLSTAEIHALIDELLTLENPYNCPHGRPTIISMSKYEIERK 738
>gi|401683694|ref|ZP_10815579.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. BS35b]
gi|400186734|gb|EJO20939.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. BS35b]
Length = 649
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 204/438 (46%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVSRGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + + +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIAIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 KISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMVLLSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSRPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL EE ++ F++
Sbjct: 379 DHQVELTEEGRDLTLFAK 396
>gi|312863945|ref|ZP_07724182.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus vestibularis F0396]
gi|311100511|gb|EFQ58717.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus vestibularis F0396]
Length = 645
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 194/401 (48%), Gaps = 52/401 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MTKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+++ + + RHA TSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 61 GEGMAQADVAMSLRRHA-TSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAAD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G G + V K + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 117 GEAYGTKLVAKAGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 226 NSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD--------- 270
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
G+ G + P +++++ L D+ P K V + ++ I AI + +
Sbjct: 271 GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMVLISSAIAQSLRE 328
Query: 354 KIAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 392
+ D++ DA L S+R + T L PLK
Sbjct: 329 Q--------DLIPDALENLAKSSTRGAAKSVQTSL---PLK 358
>gi|427385462|ref|ZP_18881769.1| DNA mismatch repair protein mutL [Bacteroides oleiciplenus YIT
12058]
gi|425727106|gb|EKU89967.1| DNA mismatch repair protein mutL [Bacteroides oleiciplenus YIT
12058]
Length = 642
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 186/378 (49%), Gaps = 46/378 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DAGA ++ V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGAQEIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLAFERH-ATSKIKEAADL---FALRTMGFRGEALASIAAVAEVELKTRMDDEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRIVIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F + S D L +++ FG + L V+ +
Sbjct: 174 TEFERIALVHPEVAFY---LYSNDTELFNLPVMPLRQRILAVFGKKLNQHLLSVDVDTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SG+++ P + A QY ++N RY+ HK + D+++
Sbjct: 231 VKVSGFVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 -----QLIPAGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELP 371
A S D DM ++P
Sbjct: 329 FNAVPSIDFDMEGMPDIP 346
>gi|402302066|ref|ZP_10821186.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC9]
gi|400381053|gb|EJP33857.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC9]
Length = 621
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 173/357 (48%), Gaps = 33/357 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+ELV N++DAGAT + + + G +++V D+
Sbjct: 1 MTRIHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGATAIEIEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R RHA TSK+ +AD+ +GT GFRGEAL +I+ VS +IT+
Sbjct: 61 GRGMERPDAETAILRHA-TSKISTVADLQT---VGTLGFRGEALPTIASVSRFSLITRTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G K I+D DVGTTV DLF+N P R+K+++ + +
Sbjct: 117 DADLGTRVEILGGKTTE--IEDAGCDVGTTVRVEDLFFNTPARKKFLKMD-RTEAGKISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND--G 237
V+ +AL P ++F+F++ + L T S + S +G + L ++ D G
Sbjct: 174 YVIMLALSRPDIAFRFVN--NNRLTLMTAGDDSLRRAIESIYGGDAAGALIPLDFTDETG 231
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ I+GYIS P S +A+Q +N R + I K ++++ + GF
Sbjct: 232 DIRITGYISKPSMIRSSRAWQTYIVNGRTIQNRAIAKAIDNV------YRALVPKMGF-- 283
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA 350
P +L + P D+ P KT + F+D ++ V +E A+R A
Sbjct: 284 ---------PLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKTVEGAVRGA 331
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 50/204 (24%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1216
+ QVD +I + L +IDQHAA ERI + L H +LS + +
Sbjct: 435 IGQVDLTYIVAQSTRALYIIDQHAAHERILFDRFCALAEGIPSQQMLVHAILSFDARETQ 494
Query: 1217 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
Y++ EL +G+++ G R++ L
Sbjct: 495 YIEENAEL-FSRLGFRM-----------------EPAGDRAYR--------------LTE 522
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV--LNSKACRGAIMFGDSLLPSEC 1334
P + ++ + E L L + ++ P+ LR L + ACR AI G+ L +
Sbjct: 523 SPADVPTDEAEDVIREILVSLGELHAAT---PAQLRQAGLATMACRAAIKAGEELSFRQM 579
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTV 1358
+++EEL+ T F C HGRPT +
Sbjct: 580 EILLEELRTTPFPFTCPHGRPTIL 603
>gi|374309991|ref|YP_005056421.1| DNA mismatch repair protein MutL [Granulicella mallensis MP5ACTX8]
gi|358752001|gb|AEU35391.1| DNA mismatch repair protein MutL [Granulicella mallensis MP5ACTX8]
Length = 654
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 172/387 (44%), Gaps = 55/387 (14%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I L + V N + +G V+ VV+EL+ NS+DAGAT++ + + +++VD+
Sbjct: 1 MGKIRVLSDQVANQIAAGEVVERPASVVKELLENSLDAGATRIRLEIEAGGRKLIRIVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ RD +L ERHA TSKL DD I T GFRGEAL SI+ V+ + + T+A
Sbjct: 61 GHGMGRDDALLAFERHA-TSKL---RSSDDLLSIATLGFRGEALPSIASVARVSLETRAV 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + G L ++D GTT+ RDLF+N P RRK+++S ++ H V
Sbjct: 117 EDEVGTMLEIAGGNLLR--VEDAGLPAGTTIAVRDLFFNTPARRKFLRSEQTELGH-VAA 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA----- 234
V AL HP F+ S LL + ++ L FG E F L V A
Sbjct: 174 LVTHYALAHPDKHFEL--HSSTQSLLVAPAVANAGERLYQIFGRETFESLIPVAAELDFS 231
Query: 235 -------------------NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKL 275
G + ++G++S P + YV++N R + +L
Sbjct: 232 RAGLPEPPPWKRGEDYEAPEPGFIRLTGFVSKPELQKLNRNSIYVFVNGRLIRD----RL 287
Query: 276 LNHLAASFDCSDSWKANNGFLKGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVF 333
+ H F + R+ + P LL L P D+ P KT V F
Sbjct: 288 ILH---------------AFTEAYRNIIPPTSYPVVLLFLEMPPQEVDVNVHPAKTEVRF 332
Query: 334 KDWEPVLAFIERAIRSAWMKKIAHDSF 360
+ V F+ A+R+A M SF
Sbjct: 333 RQGSFVHDFVRDAVRTAQMNARPAASF 359
>gi|389855776|ref|YP_006358019.1| DNA mismatch repair protein MutL [Streptococcus suis ST1]
gi|353739494|gb|AER20501.1| DNA mismatch repair protein MutL [Streptococcus suis ST1]
Length = 645
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 169/357 (47%), Gaps = 37/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RH ATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRH-ATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H
Sbjct: 117 DSAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V V R++L HP+++F ++ EL+ T + + +GI + E+ A
Sbjct: 172 V-DVVNRLSLAHPEIAFALVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEA 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ISGY+S P + + + + ++IN RY+ ++ N L
Sbjct: 229 LDFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 270 EGYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|422861711|ref|ZP_16908351.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK330]
gi|327467944|gb|EGF13434.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK330]
Length = 647
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 170/357 (47%), Gaps = 37/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRH-ATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 117 AGQHGTLLVAQGGE-----IEEHEPASSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V + R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 172 V-DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
G SK P ++N++ L D+ P K V ++ I +AI ++
Sbjct: 270 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMDLISQAIATSL 326
>gi|320529999|ref|ZP_08031075.1| DNA mismatch repair protein [Selenomonas artemidis F0399]
gi|320137796|gb|EFW29702.1| DNA mismatch repair protein [Selenomonas artemidis F0399]
Length = 621
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 174/357 (48%), Gaps = 33/357 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+ELV N++DAGAT + + + G +++V D+
Sbjct: 1 MTRIHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGATAIEIEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R RHA TSK+ ++AD+ +GT GFRGEAL +I+ VS +IT+
Sbjct: 61 GRGMERSDAETAILRHA-TSKISNVADLQT---VGTLGFRGEALPTIASVSRFSLITRTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G K I+D DVGTTV DLF+N P R+K+++ + +
Sbjct: 117 DADLGTRVEILGGKTTE--IEDAGCDVGTTVRVEDLFFNTPARKKFLKMD-RTEAGKISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND--G 237
V+ +AL P ++F+F++ + L T S + S +G + L ++ D G
Sbjct: 174 YVIMLALSRPDIAFRFVN--NNRLTLMTAGDDSLRRAIESIYGGDAAGALIPLDFTDEAG 231
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ I+GYIS P S +A+Q +N R + I K ++++ + GF
Sbjct: 232 DIRITGYISKPSMIRSSRAWQTYIVNGRTIQNRAIAKAIDNV------YRALVPKMGF-- 283
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA 350
P +L + P D+ P KT + F+D ++ V ++ A+R A
Sbjct: 284 ---------PLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKTVQGAVRGA 331
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 50/204 (24%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1216
+ QVD +I + L +IDQHAA ERI + L H +LS + +
Sbjct: 435 IGQVDLTYIVAQSTRALYIIDQHAAHERILFDRFCALAEGIPSQQMLVHAILSFDARETQ 494
Query: 1217 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
Y++ EL +G+++ G R + L
Sbjct: 495 YIEENAEL-FSRLGFRM-----------------EPAGDREYR--------------LTE 522
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV--LNSKACRGAIMFGDSLLPSEC 1334
P + ++ + E L L + ++ P+ LR L + ACR AI G+ L +
Sbjct: 523 SPADVPTDEAEDVIREILVSLGELHAAT---PAELRQAGLATMACRAAIKAGEELSFRQM 579
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTV 1358
+++EEL+ T F C HGRPT +
Sbjct: 580 EILLEELRTTPFPFTCPHGRPTIL 603
>gi|419520162|ref|ZP_14059761.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05245]
gi|379541786|gb|EHZ06951.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05245]
Length = 649
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 205/438 (46%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + + + + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYSLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLALFAK 396
>gi|410031400|ref|ZP_11281230.1| DNA mismatch repair protein MutL [Marinilabilia sp. AK2]
Length = 627
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 174/352 (49%), Gaps = 35/352 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+A+ N + +G V+ ++EL+ N++DAGAT++ V V ++V+D+G G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASALKELMENAIDAGATQIQVLVKEAGKMLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ +D I TFGFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSLTDARMSFERHA-TSKI---RTSEDLFAIRTFGFRGEALASIAAVAQVEMRTREKGAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G ++GS+ +++ + GT ++ ++LF+N P RR +++S+P ++ H V+
Sbjct: 121 LGTLIQIEGSEI------KKQEPISCIEGTHILVKNLFFNVPARRNFLKSNPVEMRHMVE 174
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ R+AL +P+V F +++ EL + ++ FG L
Sbjct: 175 E-FQRVALAYPEVGFSLT--QNDMELFNLPAGGKLSQRIVGLFGKSYQGQLVACQEETPH 231
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L + GYI P + + QY ++N+R++ +H H A+ A G +
Sbjct: 232 LNVKGYIGKPEQAKKTRGEQYFFVNNRFIKSNYLH----HAVAN--------AYEGLM-- 277
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
S P Y+L L S D+ P KT + F D V A + A++ A
Sbjct: 278 ---PSDMHPFYVLFLEIDPSHIDINVHPTKTEIKFDDERTVYAVVRSAVKQA 326
>gi|126663375|ref|ZP_01734373.1| DNA mismatch repair protein [Flavobacteria bacterium BAL38]
gi|126625033|gb|EAZ95723.1| DNA mismatch repair protein [Flavobacteria bacterium BAL38]
Length = 617
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 168/346 (48%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDA A+ + + V V+V+D+G G
Sbjct: 6 IQLLPDHVANQIAAGEVVQRPASVVKELLENAVDAKASDIKLIVKEAGKTLVQVIDNGLG 65
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ L ERHA TSK+ D+ D + T GFRGEALASI+ ++ +E+ TK
Sbjct: 66 MNTTDARLCFERHA-TSKIRQAEDLFD---LHTKGFRGEALASIAAIAHVEMKTKQDQEE 121
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V++GSK + + K GT+ ++LF+N P RR +++S + H V
Sbjct: 122 LGNHIVIEGSKLVKQEVAVLPK--GTSFAVKNLFFNIPARRNFLKSETVEFRH-VMDEFQ 178
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+A+ HP +SF I SE L SS+ +++ FG + L V + + IS
Sbjct: 179 RVAMAHPSISFTLIHNGSE---LYNLPSSNYRQRIVNIFGGKTNEKLVPVTEDTDLITIS 235
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + + Q+ ++N RY+ +H + A G LK
Sbjct: 236 GFVGKPEFAKKSRGEQFFFVNDRYIKSAYLHHAI------------MNAYEGLLKEGNQ- 282
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P+Y L L+ P D+ P KT + F D + A + A++
Sbjct: 283 ----PSYFLYLQVPPHTIDINIHPTKTEIKFDDEHSLYAILRSAVK 324
>gi|78187823|ref|YP_375866.1| DNA mismatch repair protein [Chlorobium luteolum DSM 273]
gi|123743593|sp|Q3B1F8.1|MUTL_PELLD RecName: Full=DNA mismatch repair protein MutL
gi|78167725|gb|ABB24823.1| DNA mismatch repair protein MutL [Chlorobium luteolum DSM 273]
Length = 626
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 172/360 (47%), Gaps = 44/360 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M +I RLP+ V N + +G V+ VV+EL+ N++D+GA ++ V + V+++D+
Sbjct: 1 MPSIARLPDNVANKISAGEVVQRPASVVKELLENAIDSGADRISVVIKDAGRELVRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+SR +L ER A TSKL D+DD +GT GFRGEALASIS VS E+ T+
Sbjct: 61 GRGMSRADALLSVERFA-TSKL---RDVDDLDTLGTLGFRGEALASISSVSHFELRTRMT 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
P R +G GI E +V GT+V R+LFYN P RRK+++S+ + H
Sbjct: 117 DAPVALRFRYEG------GIAVEESEVQGEAGTSVSVRNLFYNVPARRKFLKSNATEYGH 170
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
+ + V +L +P++ ++ ++ +D+ L +S L L + +G L EV
Sbjct: 171 -IFELVRSFSLAYPEIQWQLLN---DDQELFNFRTSDMLERLDTFYGKGFADSLIEVGEE 226
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ L I GYI P K QY +IN R + + + L A
Sbjct: 227 NDYLSIRGYIGRPALQKRKKLDQYFFINRRPIQNRMLTQALQQAYAELLV---------- 276
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
+ P LL L S D+ P K V F D ER++R+ + I
Sbjct: 277 -------ERQAPFALLFLGIDPSRVDVNVHPAKLEVRFDD--------ERSVRNMFYPVI 321
>gi|385813212|ref|YP_005849605.1| DNA mismatch repair protein mutL [Lactobacillus helveticus H10]
gi|403514451|ref|YP_006655271.1| DNA mismatch repair protein MutL [Lactobacillus helveticus R0052]
gi|323465931|gb|ADX69618.1| DNA mismatch repair protein mutL [Lactobacillus helveticus H10]
gi|403079889|gb|AFR21467.1| DNA mismatch repair protein MutL [Lactobacillus helveticus R0052]
Length = 636
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 172/364 (47%), Gaps = 36/364 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ F+ G+ V+
Sbjct: 1 MAKIHELSENLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFIDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI+RD + L RH ATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRH-ATSKISNEHDL---FKVSTLGFRGEALASISAVSHVEIVTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
GSK G +D GT + RDLF+N P R KY++ SP+ + +
Sbjct: 115 TENAIGIKADFSGGSKK---GQEDAASQKGTKITVRDLFFNTPARLKYLR-SPRTEIMKI 170
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R++L +P VSF + + LL T + + + + +G ++ A D
Sbjct: 171 VDIINRLSLGYPHVSFTLSN--TGKVLLRTTGNGNLKQTVANVYGRHIAEKMESFEAKDS 228
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+I+G +S P + S + F + +N RY+ +++ NN +
Sbjct: 229 DFKITGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQLNNAIMD 269
Query: 298 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
G SK A P ++ + L D+ P K V + + I AI A + K
Sbjct: 270 GYASKLAARHYPIVVIAIHVDPLLVDVNVHPTKQEVRLSKEKELSRLITGAISDALLDKT 329
Query: 356 AHDS 359
S
Sbjct: 330 EQSS 333
>gi|322377273|ref|ZP_08051765.1| DNA mismatch repair protein HexB [Streptococcus sp. M334]
gi|321281986|gb|EFX58994.1| DNA mismatch repair protein HexB [Streptococcus sp. M334]
Length = 649
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 214/465 (46%), Gaps = 49/465 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVGLALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L H ++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHHEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPSKQEVRISKEKELMTLVSEAISNSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + ++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYENTEPTRPSQAEVA 378
Query: 416 KDPVELAEENTEMEFFSQPK--HSSSLLDGSFAECLPIVPPKIDH 458
VEL +E ++ F++ + FAE P+ ++DH
Sbjct: 379 DYQVELTDEGQDLTLFAKETLDQLTKPAKLHFAERKPVNYDQLDH 423
>gi|257866606|ref|ZP_05646259.1| DNA mismatch repair protein [Enterococcus casseliflavus EC30]
gi|257872878|ref|ZP_05652531.1| DNA mismatch repair protein [Enterococcus casseliflavus EC10]
gi|257800564|gb|EEV29592.1| DNA mismatch repair protein [Enterococcus casseliflavus EC30]
gi|257807042|gb|EEV35864.1| DNA mismatch repair protein [Enterococcus casseliflavus EC10]
Length = 702
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 169/354 (47%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I L E + N + +G V+ VV+ELV N+VDAG+T++ +++ ++V+D+
Sbjct: 1 MGKIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ +RH ATSK + + DD I T GFRGEAL SI+ VS+L I T
Sbjct: 61 GEGIAEEDVLTAFKRH-ATSK---IHNRDDLFRIRTLGFRGEALPSIASVSILSIETAVK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +KG + R+ GT + +LFYN P R KY+++ + L ++
Sbjct: 117 DAQQGSFVRLKGGAVEEHLPANLRQ--GTKITVENLFYNTPARLKYVKTLQTE-LANIGD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIAL HP+V+F+ + +++L T S + +G+E + ++ D
Sbjct: 174 IVNRIALSHPEVAFRLV--HEGNKMLSTTGSGQLKQTIAGIYGVETAKKMIAIDTEDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+++G++S P + + + + IN RY+ ++ N + G
Sbjct: 232 KVTGFVSLPEVTRASRNYLSTIINGRYI-------------------RNFALNKAIVAGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P +L ++ L D+ P K V E + I +AI A
Sbjct: 273 GSKLMVGRFPLAVLEIKMDPLLVDVNVHPTKQEVRLSKEEELTKLISKAINEAL 326
>gi|298480178|ref|ZP_06998376.1| DNA mismatch repair protein MutL [Bacteroides sp. D22]
gi|298273459|gb|EFI15022.1| DNA mismatch repair protein MutL [Bacteroides sp. D22]
Length = 633
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 186/395 (47%), Gaps = 46/395 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIRQAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R V+ GS+ + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRLVIAGSQV------ESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L S +++ FG + L + N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 231 VKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------------------- 268
Query: 299 KRSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ Q P +Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 269 MEAYEQLIPTGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS 388
A S D D + ++P + S H ++
Sbjct: 329 FSAIPSIDFDTEDMPDIPAFEEKISSEPPKIHYNT 363
>gi|119356019|ref|YP_910663.1| DNA mismatch repair protein MutL [Chlorobium phaeobacteroides DSM
266]
gi|166232082|sp|A1BCW2.1|MUTL_CHLPD RecName: Full=DNA mismatch repair protein MutL
gi|119353368|gb|ABL64239.1| DNA mismatch repair protein MutL [Chlorobium phaeobacteroides DSM
266]
Length = 624
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 176/357 (49%), Gaps = 38/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I RLP+ V N + +G V+ V++EL+ N++DA A+K+ V + V++VD+
Sbjct: 1 MAKIARLPDNVANKISAGEVVQRPASVIKELLENAIDACASKITVTIKDAGKELVQIVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+SR +L ER A TSK+ + D+D + + GFRGEAL SI+ VS E+ TK
Sbjct: 61 GIGMSRQDALLSVERFA-TSKISGVEDLD---SLMSLGFRGEALPSIASVSQFELKTKPE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G+R G + + + K GTT+ R+LFYN P RRK+++S+ + H + +
Sbjct: 117 GALLGFRFRCDGGEPVEESEVNAEK--GTTITVRNLFYNVPARRKFLKSNATEFRH-IFE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSF-LDEVNANDGA 238
V +AL +P++ +K M S+DE L + L + +G E+FS L V+ +
Sbjct: 174 SVKSLALAYPEIEWK---MVSDDEELFHFRTPDIYERLDAFYG-ENFSLSLIPVSEENDY 229
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L ISG++ P K QY+Y+N R + + + L G
Sbjct: 230 LSISGFLGKPGMQKRQKLDQYIYVNRRIIQNRMLSQALQQAY-----------------G 272
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
+ + P LL L S D+ P K V F+D ER++R+ + I
Sbjct: 273 ELLVERQAPFALLFLGIDPSRIDVNVHPAKLEVKFED--------ERSVRTMFYPVI 321
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 23/197 (11%)
Query: 1166 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV 1225
D K+ Q +K I + G + +IDQH A ER+ L E V++ + L Q++
Sbjct: 437 DPKIWQLHNKYIICQIKTGMM-IIDQHVAHERV-LYERAVDVMNQNVPNSQQLLFPQKIE 494
Query: 1226 LPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFN-KNLNLLQRQITVITLLA-VPCIFGV 1283
L Y++ + + + G+ N+ + G+++ + + R T +T+L + F
Sbjct: 495 LRAWEYEVFEEIRDDLYRLGF--NLRSFGAKTVMIEGIPQDVRPGTEVTILQDMITEFQE 552
Query: 1284 NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQ 1343
N S + L E + LA S +CR AIM G L E +++ L
Sbjct: 553 NSSKLKL-ERRENLA----------------RSYSCRNAIMAGQKLSLEEMRSLIDNLFA 595
Query: 1344 TSLCFQCAHGRPTTVPL 1360
T + + C HGRP + L
Sbjct: 596 TRVPYTCPHGRPVIIKL 612
>gi|417015926|ref|ZP_11946960.1| DNA mismatch repair protein [Lactobacillus helveticus MTCC 5463]
gi|328462817|gb|EGF34684.1| DNA mismatch repair protein [Lactobacillus helveticus MTCC 5463]
Length = 636
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 174/365 (47%), Gaps = 38/365 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ F+ G+ V+
Sbjct: 1 MAKIHELSENLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFIDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI+RD + L RH ATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRH-ATSKISNEHDL---FKVSTLGFRGEALASISAVSHVEIVTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
GSK G +D GT + RDLF+N P R KY++ SP+ + +
Sbjct: 115 TENAIGIKADFSGGSKK---GQEDAASQKGTKITVRDLFFNTPARLKYLR-SPRTEIMKI 170
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAND 236
+ R++L +P VSF + + ++L + + L +++ +G ++ A D
Sbjct: 171 VDIINRLSLGYPHVSFT---LSNTGKVLFRTTGNGNLKQTVANVYGRHIAEKMESFEAKD 227
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+I+G +S P + S + F V +N RY+ +++ NN +
Sbjct: 228 SDFKITGLMSKPVLTRSTRNFISVLLNGRYI-------------------KNFQLNNAIM 268
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK A P ++ + L D+ P K V + + I AI A + K
Sbjct: 269 DGYGSKLAARHYPIVVIAIHVDPMLVDVNVHPTKQEVRLSKEKELSRLITGAISDALLDK 328
Query: 355 IAHDS 359
S
Sbjct: 329 TEQSS 333
>gi|379706198|ref|YP_005204657.1| DNA mismatch repair protein mutL [Streptococcus infantarius subsp.
infantarius CJ18]
gi|374682897|gb|AEZ63186.1| DNA mismatch repair protein mutL [Streptococcus infantarius subsp.
infantarius CJ18]
Length = 646
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 173/358 (48%), Gaps = 47/358 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + G+ N ++V
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEESGLKN--IQVT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GIS++ + L RH ATSK+ AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 59 DNGEGISQEDVALSLHRH-ATSKIKSQADL---FRIRTLGFRGEAIPSIASISHFTVKTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKK 172
G V KG + ER++ VGT + +LFYN P R KYM+S +
Sbjct: 115 TADEHYGTLLVAKGGEI-------ERQEAISTPVGTKITVENLFYNTPARLKYMKSLQSE 167
Query: 173 VLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDE 231
+ H V V R++L HP+++F I+ + + T S + L I+ +G+ + E
Sbjct: 168 LAHIV-DVVNRLSLAHPEIAFTLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIE 223
Query: 232 VNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 291
++ D E+SGYIS P + + + + + IN RY+ ++
Sbjct: 224 ISNADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLL 264
Query: 292 NNGFLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
N L G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 265 NRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMGLISSAI 322
>gi|161506973|ref|YP_001576927.1| DNA mismatch repair protein [Lactobacillus helveticus DPC 4571]
gi|172048183|sp|A8YTI0.1|MUTL_LACH4 RecName: Full=DNA mismatch repair protein MutL
gi|160347962|gb|ABX26636.1| DNA mismatch repair protein [Lactobacillus helveticus DPC 4571]
Length = 636
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 38/365 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ F+ G+ V+
Sbjct: 1 MAKIHELSENLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFIDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI+RD + L RH ATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRH-ATSKISNEHDL---FKVSTLGFRGEALASISAVSHVEIVTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
GSK G +D GT + RDLF+N P R KY++ SP+ + +
Sbjct: 115 TENAIGIKADFSGGSKK---GQEDAASQKGTKITVRDLFFNTPARLKYLR-SPRTEIMKI 170
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAND 236
+ R++L +P VSF + + ++L + + L +++ +G ++ A D
Sbjct: 171 VDIINRLSLGYPHVSFT---LSNTGKVLFRTTGNGNLKQTVANVYGRHIAEKMESFEAKD 227
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+I+G +S P + S + F + +N RY+ +++ NN +
Sbjct: 228 SDFKITGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQLNNAIM 268
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK A P ++ + L D+ P K V + + I AI A + K
Sbjct: 269 DGYGSKLAARHYPIVVITIHVDPMLVDVNVHPTKQEVRLSKEKELSRLITDAISDALLDK 328
Query: 355 IAHDS 359
S
Sbjct: 329 TEQSS 333
>gi|393789468|ref|ZP_10377589.1| DNA mismatch repair protein mutL [Bacteroides nordii CL02T12C05]
gi|392650916|gb|EIY44582.1| DNA mismatch repair protein mutL [Bacteroides nordii CL02T12C05]
Length = 627
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 185/378 (48%), Gaps = 46/378 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEACNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRLEAEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + + GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKLAIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L SS +++ FG + L V+ N
Sbjct: 174 TEFERIALVHPEVAFSLYSNDSE---LFNLPVSSLRQRILAVFGKKLNQQLLSVDVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ISGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 231 IKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q P +Y L + D+ P KT + F++ + + I A++ + K
Sbjct: 274 -----QLIPIGEQISYFLYFEVDPANIDVNIHPTKTEIKFENEQAIWQIISAAVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELP 371
A S D D + ++P
Sbjct: 329 FNAVPSIDFDTEDMPDIP 346
>gi|167752896|ref|ZP_02425023.1| hypothetical protein ALIPUT_01158 [Alistipes putredinis DSM 17216]
gi|167659965|gb|EDS04095.1| DNA mismatch repair domain protein [Alistipes putredinis DSM 17216]
Length = 629
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 180/373 (48%), Gaps = 33/373 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LPE V N + +G V+ + VV+E++ N++DAGA V V + +++VDDG G
Sbjct: 5 IKLLPEVVANQIAAGEVVNRPSSVVKEMMENAIDAGARSVKVNFRDGGKELIQIVDDGCG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + +RHA TSK+ L DD + TFGFRGEALASI+ VS +E+ T+
Sbjct: 65 MSPIDARMAFDRHA-TSKISSL---DDIYALKTFGFRGEALASIAAVSQVELRTRQAEDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + G + ++ VG+ R+LFYN P RRK+++ S +K
Sbjct: 121 VGTLTTVNGGE--FVSQTLAACPVGSQFYVRNLFYNVPARRKFLEKSTTST-GQIKSEFQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL +P+V F+ + D+ L ++S + ++ G L EV+A+ + ++
Sbjct: 178 RVALCNPQVGFELL---MNDQPLYRLPAASLASRIVDVVGRHIKQNLLEVDADTSIVRVT 234
Query: 243 GYISSPYDS-ISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG-KR 300
G++ P + S + QY+++N RY F +KA LK ++
Sbjct: 235 GFVGRPAAAKKSNSSEQYLFVNGRY----------------FRSPYFFKA---ILKAYEK 275
Query: 301 SKSQAC-PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
AC P+Y L L S D+ P KT V F D E V I A+R K A
Sbjct: 276 LIPDACSPSYFLYLTIDPSRIDVNVHPQKTEVKFADEEAVWQIINAAVRETLAKTGAVPL 335
Query: 360 FDVDMLEDAELPL 372
D D + E+P+
Sbjct: 336 MDFDQTDSVEIPV 348
>gi|58266232|ref|XP_570272.1| mismatch repair-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57226505|gb|AAW42965.1| mismatch repair-related protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 759
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 161/293 (54%), Gaps = 18/293 (6%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC--NCYVKVVD 58
M I LP T+RS +L L ++ EL+ NS+DA ATK+ YV + N ++V D
Sbjct: 1 MPNILPLPRPTSTTLRSSIILPSLAQIFSELLQNSLDAEATKIECYVNLAKGNETLRVED 60
Query: 59 DGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 118
+G+GIS++GL +G+R TSK H + +G++GFRGEALASI+ +SLL+I T+
Sbjct: 61 NGTGISKNGLAKIGKRFR-TSKEIHEGGLGP---VGSYGFRGEALASIASLSLLDITTRR 116
Query: 119 HGRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
P Y K+++ SK L+ G + +R GTTVV R++F PVRR+ + ++ +L
Sbjct: 117 ASFPV-YTKILRHSKTLFEGPNPDRHIAGGQGTTVVVREIFRTIPVRREELAATSSTLLM 175
Query: 176 S-VKKCVLRIALVHPKVSFKFIDMESE-----DELLCTCSSSSPLALLISSFGIEDFSFL 229
S +KK V +AL +P V + + ++ ++ +S S L + + +G +
Sbjct: 176 SQLKKVVETLALGNPGVRWVLWEEKTTTTGGLKRIMSINASDSALDVFKTLYGGALVQSV 235
Query: 230 DEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAAS 282
++ G ++ G+IS D KA Q++YIN+ + +G +H + AS
Sbjct: 236 QKIKVTAGKRKVDGFISISGD--VSKAHQHLYINNYPIDRGDVHTAIAKKFAS 286
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 114/249 (45%), Gaps = 48/249 (19%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGG-----TLAVIDQHAADERIRLEELRHKVLSGEGK 1213
I+KS L +A VL QVD+KFI VV TLA+IDQHAADER+ +E++ ++ G K
Sbjct: 480 ISKSSLSNATVLGQVDRKFIAVVLSTNINLTTLALIDQHAADERVAVEKVLLELCEGFAK 539
Query: 1214 SVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVIT 1273
L AE P I +L QI W+ ++ + L + +
Sbjct: 540 D-DLLVAELAKTRPMI---ILTQAEAQILSQPWVLSLFKRWGIRLTMPPGLSHGEYIQVK 595
Query: 1274 LLAVPC-----------------------IFGVNLSDVDLL-EFLQ--QLADTDGSST-- 1305
+ VP I + S++ +L E L+ + D +G T
Sbjct: 596 VETVPLSLLSRLGRKEGSEMTRLVRGYLPIVAEHASEITVLVENLEGKAMEDNEGGDTEG 655
Query: 1306 -----------TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGR 1354
P +L + NSKACRGAIMF D L +C ++++L QT F CAHGR
Sbjct: 656 YGGDWGRLMRFMPREMLELANSKACRGAIMFEDRLSHDQCDRLIQQLSQTRFPFMCAHGR 715
Query: 1355 PTTVPLVNL 1363
P+ VPLV L
Sbjct: 716 PSMVPLVIL 724
>gi|160882395|ref|ZP_02063398.1| hypothetical protein BACOVA_00344 [Bacteroides ovatus ATCC 8483]
gi|293369507|ref|ZP_06616086.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides
ovatus SD CMC 3f]
gi|299148151|ref|ZP_07041213.1| DNA mismatch repair protein MutL [Bacteroides sp. 3_1_23]
gi|336415749|ref|ZP_08596088.1| DNA mismatch repair protein mutL [Bacteroides ovatus 3_8_47FAA]
gi|423292377|ref|ZP_17270955.1| DNA mismatch repair protein mutL [Bacteroides ovatus CL02T12C04]
gi|156112208|gb|EDO13953.1| DNA mismatch repair domain protein [Bacteroides ovatus ATCC 8483]
gi|292635392|gb|EFF53905.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides
ovatus SD CMC 3f]
gi|298512912|gb|EFI36799.1| DNA mismatch repair protein MutL [Bacteroides sp. 3_1_23]
gi|335940628|gb|EGN02495.1| DNA mismatch repair protein mutL [Bacteroides ovatus 3_8_47FAA]
gi|392661786|gb|EIY55359.1| DNA mismatch repair protein mutL [Bacteroides ovatus CL02T12C04]
Length = 633
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 189/402 (47%), Gaps = 50/402 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G + V+ GS+ E ++ G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKLVIAGSQV-------ESQEAISCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNI 172
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
RIALVHP+V+F +SE L S +++ FG + L ++ N
Sbjct: 173 LAEFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIDVNTT 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 230 MVKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV--------------------- 268
Query: 298 GKRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
+ Q PA Y + + D+ P KT + F++ + + + +++ +
Sbjct: 269 -MEAYEQLIPAGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLG 327
Query: 353 KKIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS--SPLK 392
K A S D D + ++P + S H ++ +P K
Sbjct: 328 KFSAIPSIDFDTEDMPDIPAFEEKISSEPPKVHYNTDYNPFK 369
>gi|262408157|ref|ZP_06084704.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294645117|ref|ZP_06722842.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides
ovatus SD CC 2a]
gi|294809731|ref|ZP_06768418.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides
xylanisolvens SD CC 1b]
gi|345510158|ref|ZP_08789726.1| DNA mismatch repair protein mutL [Bacteroides sp. D1]
gi|229445488|gb|EEO51279.1| DNA mismatch repair protein mutL [Bacteroides sp. D1]
gi|262353709|gb|EEZ02802.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639541|gb|EFF57834.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides
ovatus SD CC 2a]
gi|294443065|gb|EFG11845.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides
xylanisolvens SD CC 1b]
Length = 633
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 186/395 (47%), Gaps = 46/395 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIRQAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R V+ GS+ + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRLVIAGSQV------ESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L S +++ FG + L + N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 231 VKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------------------- 268
Query: 299 KRSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ Q P +Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 269 MEAYEQLIPTGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS 388
A S D D + ++P + S H ++
Sbjct: 329 FSAIPSIDFDTEDMPDIPAFEEKMSSEPPKIHYNT 363
>gi|386820314|ref|ZP_10107530.1| DNA mismatch repair protein MutL [Joostella marina DSM 19592]
gi|386425420|gb|EIJ39250.1| DNA mismatch repair protein MutL [Joostella marina DSM 19592]
Length = 611
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 174/346 (50%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDAG+T + + ++VVD+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELIENAVDAGSTSIKLIIKDAGKTLIQVVDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ D+ + T GFRGEALASI+ ++ +E+ T G
Sbjct: 65 MSVTDARMSFERHA-TSKIKAAEDL---FQLHTKGFRGEALASIAAIAHVEMNTCQEGDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + ++GSK + G+ K GT+++ ++LF+N P RR +++S ++ H + +
Sbjct: 121 VGTQLKIEGSKIVDQGVTVTPK--GTSLLVKNLFFNIPARRNFLKSDTVELRHIIDEF-Q 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP + F F + SE L +S+ ++ FG + L V + + +S
Sbjct: 178 RVALAHPTIQFDFYNNGSE---LFNLPASNLRQRIVHIFGGKTNEKLVPVEEDTEVVNLS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+I P + + Q+ ++N+R+V +H + CS A G + K
Sbjct: 235 GFICKPEFAKKTRGEQFFFVNNRFVKNSYLHHAV--------CS----AFEGLM-----K 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
Q P+Y L L S D+ P KT V F D + A + +++
Sbjct: 278 EQTHPSYFLFLEVDPSGIDINIHPTKTEVKFDDEHALYAILRASVK 323
>gi|336173005|ref|YP_004580143.1| DNA mismatch repair protein mutL [Lacinutrix sp. 5H-3-7-4]
gi|334727577|gb|AEH01715.1| DNA mismatch repair protein mutL [Lacinutrix sp. 5H-3-7-4]
Length = 620
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 173/352 (49%), Gaps = 40/352 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGAT + + ++V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATHIKLILKDAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ DD + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSVTDARLSFERHA-TSKI---KSADDLFQLNTKGFRGEALASIAAIAHVELKTKQEQDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G V++GS+ + +DV GT++ ++LF+N P RR +++S+P + H +
Sbjct: 121 VGTCIVIEGSEV-------QSQDVVVTPKGTSLSVKNLFFNIPARRNFLKSNPVETRHII 173
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R+AL HP + F SE + S+ +++ FG + L V +
Sbjct: 174 DEF-HRVALAHPSIGFVMYHNGSE---VFNLPVSNYRQRIVNIFGAKTNEKLVPVEEDTE 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFL 296
L+ISG++ P + + Q+ ++N R++ LNH + ++FD G L
Sbjct: 230 VLKISGFVGKPEFAKKTRGEQFFFVNDRFIKSA----YLNHAIGSAFD---------GLL 276
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
K A +Y LNL D+ P KT + F D + A + A++
Sbjct: 277 -----KDGAHASYFLNLTVNPQTIDINIHPTKTEIKFDDEHTLYAILRSAVK 323
>gi|121533676|ref|ZP_01665503.1| DNA mismatch repair protein MutL [Thermosinus carboxydivorans Nor1]
gi|121307667|gb|EAX48582.1| DNA mismatch repair protein MutL [Thermosinus carboxydivorans Nor1]
Length = 602
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 167/352 (47%), Gaps = 29/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVD 58
+ TI L E N + +G V+ VV+ELV NS+DA + + V + G N Y++V D
Sbjct: 2 ITTIRVLDETTANKIAAGEVVERPASVVKELVENSIDAQSRSIEVEIVDGGIN-YIRVSD 60
Query: 59 DGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 118
DG G+S L RHA TSK+ DD I + GFRGEAL SI+ VS + T+
Sbjct: 61 DGIGMSAADARLAILRHA-TSKI---RTADDLYNINSLGFRGEALPSIAAVSRFTLTTRL 116
Query: 119 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
H P G ++G L I + VGTTV DLF+N P RRK+++ +P +
Sbjct: 117 HAEPIGTYIEIQGG--LVTDIREAGGSVGTTVTVSDLFFNTPARRKFLK-TPATESAYIH 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ +IAL P V+ K I+ ++ ++L T + S +G + + L ++ DG
Sbjct: 174 DILGKIALARPDVAIKLIN--NKRQVLATTGTGRLFDAAASLYGYKAATELLPLDYTDGD 231
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ I+GY+ P+ S + +Q +N R + + K L+ + S NGF
Sbjct: 232 IHITGYVGKPHLLKSSRQWQTWTVNGRTISNRMLSKALD------NAYHSLLPKNGF--- 282
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P ++ + P D+ P K V F D + V + +A+ SA
Sbjct: 283 --------PLAIIQIVIPSDKVDVNVHPQKNEVKFSDEQAVFRAVYKAVLSA 326
>gi|336426863|ref|ZP_08606871.1| hypothetical protein HMPREF0994_02877 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010503|gb|EGN40486.1| hypothetical protein HMPREF0994_02877 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 737
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 178/368 (48%), Gaps = 53/368 (14%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ + VV+ELV N++DAGA V V + C +++V D+
Sbjct: 1 MAEIMLLDSSTIDKIAAGEVVERPSSVVKELVENAMDAGARAVTVEIKEGGCSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI ++ + RHA TSK+ +DD + + GFRGEAL+SI+ VS++E+ITK
Sbjct: 61 GGGIEKEQVRKAFFRHA-TSKI---RTVDDLYQVKSLGFRGEALSSIAAVSMVELITKTR 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
G ++G K + E +V GTT++ R+LF+N PVR+K+++S + +
Sbjct: 117 DELTGIHYRLEGEK------EREFSEVGAPEGTTIIVRELFFNTPVRKKFLKSYATEGSY 170
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
+ + +AL P+V+F+F M + T + +L +G E L +A
Sbjct: 171 -ISDLMEHMALSRPEVAFQF--MMNGQVRFHTSGNGDIREILYRIYGREIIKELIPFSAQ 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
L+I G++ SP S + F++ ++N RY+ K P+ L L A +
Sbjct: 228 AEGLQIEGFLGSPSVVRSNRNFEFFFVNGRYI-KSPL--LSKGLEAGYK----------- 273
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFD---------PLKTHVVFKDWEPVLAFIERA 346
AYL+ + P +L T D P K + F D + AF+E
Sbjct: 274 ------------AYLMQHKFPFALLHFTIDPDRIDVNVHPSKMEIRFHDQPGLYAFLEEK 321
Query: 347 IRSAWMKK 354
+R A ++
Sbjct: 322 VREALRRR 329
Score = 47.8 bits (112), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 20/214 (9%)
Query: 1152 EFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGE 1211
E F + K ++ ++L QV + L IDQHAA E+++ E L +K+ +G
Sbjct: 534 ELFEEKLLTKEAVQSFRILGQVFDTYWLAQYEDKLLFIDQHAAHEKVKYEALINKMKTGT 593
Query: 1212 GKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV 1271
S L L L LL+ + G+ I G ++
Sbjct: 594 VDS-QMLTPPIVLNLSAREAHLLERYESYFAQMGF--EIDEFGGNAY------------- 637
Query: 1272 ITLLAVPC-IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLL 1330
T+ +VPC ++G + + +E + + + TP + L S AC+ A+ ++
Sbjct: 638 -TVRSVPCDLYG--HYEKEFIEAILDELEEEPPHGTPSVIAEKLASMACKSAVKGNHTMS 694
Query: 1331 PSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
E ++++L + + C HGRPT + + E
Sbjct: 695 FREMEALLDQLLKLENPYHCPHGRPTIITMSKYE 728
>gi|294139254|ref|YP_003555232.1| DNA mismatch repair protein MutL [Shewanella violacea DSS12]
gi|293325723|dbj|BAJ00454.1| DNA mismatch repair protein MutL [Shewanella violacea DSS12]
Length = 619
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 174/359 (48%), Gaps = 44/359 (12%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ V++ELV NS+DAGAT+V + + +K+ D+GS
Sbjct: 2 TIQILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIKIHDNGS 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI ++ L L RHA TSKL L D+D I +FGFRGEALASIS VS L + ++ +
Sbjct: 62 GIPKEELSLALSRHA-TSKLSSLDDLD---AILSFGFRGEALASISSVSRLTLTSRTAEQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++ +GS + + + VG+TV + DLF+N P RR++++S + H + + +
Sbjct: 118 SEAWQAYAEGSD-MAVKVIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTH-IDEWL 175
Query: 182 LRIALVHPKVSF----------KFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE 231
RIALV + F F ++ D+ L + S + + +E
Sbjct: 176 KRIALVSRDIHFTLKNNGKVVRNFRPAKTSDQYLQRLAQVSGKKFALQALAVE------- 228
Query: 232 VNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 291
L++SGYI SPY S QY Y+N R V +L+NH A
Sbjct: 229 --CEHEGLKLSGYIQSPYFEGSASDTQYFYVNGRLVRD----RLVNH------------A 270
Query: 292 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
+ +QA +L L PH + D+ P K V F V +I +A++SA
Sbjct: 271 VRQAFAEHVTGAQASYVLMLELD-PHQV-DVNVHPAKHEVRFHQSRYVHDYIFQALQSA 327
>gi|313885802|ref|ZP_07819545.1| DNA mismatch repair protein, C-terminal domain protein
[Porphyromonas asaccharolytica PR426713P-I]
gi|312924706|gb|EFR35472.1| DNA mismatch repair protein, C-terminal domain protein
[Porphyromonas asaccharolytica PR426713P-I]
Length = 646
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 193/395 (48%), Gaps = 41/395 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ +++ELV NS+DA AT++ + + ++V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASMLKELVENSIDAHATQITIELQDAGKELMRVIDDGVG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +DD + + GFRGEALASI V+ +E++T+
Sbjct: 65 MSPLDARMAFERHA-TSKI---SSVDDLFTLRSMGFRGEALASIVAVAQIELVTRQADSD 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
GY+ ++ GS+ + +VGT++ ++LFYN P RR++++ S ++ H + +
Sbjct: 121 IGYKLLINGSEV--ISSSPTVAEVGTSITVKNLFYNVPARRRFLKGSETELRH-IYRQFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+P+++F + SE +L+ S ++ G L + +S
Sbjct: 178 RIALVYPEIAFT---LYSEGKLIRNLPKSDLQHRIVDLLGKSYSKQLIPIEYQGPLANVS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+I+ P D+ A Q+ ++N RY+ H+ + ++ S
Sbjct: 235 GFITLPRDAKRRGAQQFFFVNGRYMKHPYFHRAVMNVFEDLIAPGSQ------------- 281
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR-----SAWMKKIAH 357
P Y + + S D+ P KT + F D + + + +R ++ M I
Sbjct: 282 ----PNYFIYFQVDPSRIDVNIHPTKTEIKFLDEQAIFKLLMVVLREHLSTTSAMPAI-- 335
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLK 392
+F D L E+P + + QSS+ L P++
Sbjct: 336 -TFSTDQL--IEIPAYDA---TRQSSSTLQPPPVQ 364
>gi|306834545|ref|ZP_07467658.1| DNA mismatch repair protein HexB [Streptococcus bovis ATCC 700338]
gi|304423347|gb|EFM26500.1| DNA mismatch repair protein HexB [Streptococcus bovis ATCC 700338]
Length = 647
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 172/356 (48%), Gaps = 43/356 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI++D + L RH ATSK+ + AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 61 GEGIAQDDVALSLHRH-ATSKIKNQADL---FRIRTLGFRGEAIPSIASISHFTVKTATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G V KG + E+++ VGT + +LFYN P R KYM+S ++
Sbjct: 117 DENYGTLLVAKGGEI-------EKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F I+ + + T S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFSLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
D E+SGYIS P + + + + + IN RY+ ++ N
Sbjct: 226 NADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNR 266
Query: 294 GFLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
L G SK P +++++ L D+ P K V + +++ I AI
Sbjct: 267 AILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMSLISSAI 322
>gi|288906382|ref|YP_003431604.1| DNA mismatch repair protein mutL [Streptococcus gallolyticus UCN34]
gi|325979396|ref|YP_004289112.1| DNA mismatch repair protein mutL [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386338873|ref|YP_006035042.1| DNA mismatch repair protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288733108|emb|CBI14689.1| DNA mismatch repair protein mutL [Streptococcus gallolyticus UCN34]
gi|325179324|emb|CBZ49368.1| DNA mismatch repair protein mutL [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334281509|dbj|BAK29083.1| DNA mismatch repair protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 647
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 172/356 (48%), Gaps = 43/356 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI++D + L RH ATSK+ + AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 61 GKGIAQDDVALSLHRH-ATSKIKNQADL---FRIRTLGFRGEAIPSIASISHFTVKTATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G V KG + E+++ VGT + +LFYN P R KYM+S ++
Sbjct: 117 DENYGTLLVAKGGEI-------EKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F I+ + + T S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFSLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
D E+SGYIS P + + + + + IN RY+ ++ N
Sbjct: 226 NADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNR 266
Query: 294 GFLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
L G SK P +++++ L D+ P K V + +++ I AI
Sbjct: 267 AILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMSLISSAI 322
>gi|380693624|ref|ZP_09858483.1| DNA mismatch repair protein mutL [Bacteroides faecis MAJ27]
Length = 640
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 181/378 (47%), Gaps = 46/378 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++++DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQIIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLAFERHA-TSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRLESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRLVIAGSKV------ESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+VSF +SE L S +++ FG + L + N
Sbjct: 174 AEFERIALVHPEVSFSLYSNDSE---LFNLPVSPLRQRILAIFGKKLNQQLLNIEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ISGYI+ P + A QY ++N RY+ H+ +
Sbjct: 231 VKISGYIAKPETARKKGAHQYFFVNGRYMRHPYFHRAV---------------------- 268
Query: 299 KRSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ Q P +Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 269 MEAYEQLIPVGEQVSYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELP 371
A S D D + E+P
Sbjct: 329 FSAIPSIDFDTEDMPEIP 346
>gi|331701279|ref|YP_004398238.1| DNA mismatch repair protein mutL [Lactobacillus buchneri NRRL
B-30929]
gi|329128622|gb|AEB73175.1| DNA mismatch repair protein mutL [Lactobacillus buchneri NRRL
B-30929]
Length = 643
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 183/377 (48%), Gaps = 43/377 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
+ I++LP + N + +G V+ VV+ELV NS+DA ++++ V V +KVVDD
Sbjct: 4 LNEIHKLPTILSNQIAAGEVVERPASVVKELVENSIDAKSSEIDVTVENSGLKLIKVVDD 63
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G+GI + RHA TSK+ ++ D + T GFRGEAL SIS V+ + + T
Sbjct: 64 GNGIDSSQVQTAFLRHA-TSKI---SEQRDLFRVRTLGFRGEALPSISSVANVRMKTSTG 119
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G KG K + + RK GTTV LFYN P R KY+ SSP L +
Sbjct: 120 SI--GTEVEYKGGKLVTQKASESRK--GTTVEVASLFYNTPARLKYL-SSPNTELSKISD 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP+++F FI + ELL T +L + +G++ S + + ND +
Sbjct: 175 IVNRLALSHPEIAFSFI--SNGRELLRTSGRGDLRQVLGAIYGVKTVSKMAAIKGNDLDI 232
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++SGY+S P + S + + + +N R++ P+ K + A + G
Sbjct: 233 KVSGYVSLPELTRSSRNYISLILNGRFIRNFPLTK---AVIAGY--------------GS 275
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
+ P ++N+ +L D+ P K V D EP++ K IA+
Sbjct: 276 KLMIGRFPIAVINIDADPALIDVNVHPTKQEVRISD-EPMIG-----------KLIANAI 323
Query: 360 FDVDMLEDAELPLESSR 376
+ DML D +L +++R
Sbjct: 324 Y--DMLRDKQLIPDATR 338
>gi|171778536|ref|ZP_02919663.1| hypothetical protein STRINF_00515 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282759|gb|EDT48183.1| DNA mismatch repair domain protein [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 646
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 173/358 (48%), Gaps = 47/358 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + G+ N ++V
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEESGLKN--IQVT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GIS++ + L RH ATSK+ AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 59 DNGEGISQEDVALSLHRH-ATSKIKSQADL---FRIRTLGFRGEAIPSIASISHFTVKTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKK 172
G V KG + ER++ VGT + +LFYN P R KYM+S +
Sbjct: 115 TADEHYGTLLVAKGGEI-------ERQEAISTPVGTKITVENLFYNTPARLKYMKSLQSE 167
Query: 173 VLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDE 231
+ H V V R++L HP+++F I+ + + T S + L I+ +G+ + E
Sbjct: 168 LAHIV-DVVNRLSLAHPEIAFTLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIE 223
Query: 232 VNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 291
++ D E+SGYIS P + + + + + IN RY+ ++
Sbjct: 224 ISNADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLL 264
Query: 292 NNGFLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
N L G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 265 NRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMGLISSAI 322
>gi|302386430|ref|YP_003822252.1| DNA mismatch repair protein MutL [Clostridium saccharolyticum WM1]
gi|302197058|gb|ADL04629.1| DNA mismatch repair protein MutL [Clostridium saccharolyticum WM1]
Length = 639
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 172/355 (48%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ VV+EL+ N++DA AT V V + ++V D+
Sbjct: 1 MPNITVLDQNTINKIAAGEVIERPASVVKELLENAIDARATAVTVEIKEGGTSLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI ++ + L RH+ TSK+ ++D + + GFRGEALASI+ VS +E+ITK
Sbjct: 61 GCGIPKEEVSLAFLRHS-TSKI---KSVEDLFTVSSLGFRGEALASIAAVSQVELITKTS 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G + +++ GTT ++R+LFYN P R+K++++ + H V +
Sbjct: 117 IGLTGTRYQIDGGQ--ERSMEEVGAPEGTTFIARNLFYNTPARKKFLKTPMTEGAH-VAE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V ++AL HP+VS +FI ++ L T + + ++ + FG E + L EV +
Sbjct: 174 LVEKLALSHPEVSIRFI--QNNQNKLHTSGNHNLKDIVYTVFGREIAANLLEVTVKKPEV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GYI P S + ++ +IN RY+ I + + F +
Sbjct: 232 SIHGYIGKPVISRGNRNYENYFINGRYIKSSIISRAIEEAYKPFMMQHKY---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P +L+ + D+ P K + F+D E + + +A+ SA K
Sbjct: 282 -------PFTMLHFSIDPEMLDVNVHPTKMELRFRDGEMIYHMVYQAVSSALAHK 329
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 34/187 (18%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIK--- 1242
L +IDQHAA E++ E+ G KS YL +LV P I L QN +K
Sbjct: 470 LYIIDQHAAHEKVLYEKTM-----GTLKSKEYLS---QLVSPPIILTLNQNEEALLKRHL 521
Query: 1243 ----DWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLSDVDLLEFLQQL 1297
D G+ I G R + + VP +F + ++ L+E + L
Sbjct: 522 KYFTDIGF--EIEPFGGREY--------------AVRGVPANLFSIAKKEL-LIEMIDGL 564
Query: 1298 ADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT 1357
++ DGSS +P + + S +C+ A+ G L +E ++++L + C HGRPT
Sbjct: 565 SE-DGSSHSPDIIYEKVASLSCKAAVKGGHRLSAAEANELIDQLLNLENPYACPHGRPTI 623
Query: 1358 VPLVNLE 1364
+ + E
Sbjct: 624 ISMSKYE 630
>gi|383114106|ref|ZP_09934871.1| DNA mismatch repair protein mutL [Bacteroides sp. D2]
gi|313694186|gb|EFS31021.1| DNA mismatch repair protein mutL [Bacteroides sp. D2]
Length = 633
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 189/402 (47%), Gaps = 50/402 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G + V+ GS+ E ++ G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKLVIAGSQV-------ESQEAISCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNI 172
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
RIALVHP+V+F +SE L S +++ FG + L ++ N
Sbjct: 173 LAEFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIDVNTT 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 230 MVKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV--------------------- 268
Query: 298 GKRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
+ Q PA Y + + D+ P KT + F++ + + + +++ +
Sbjct: 269 -MEAYEQLIPAGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLG 327
Query: 353 KKIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS--SPLK 392
K A S D D + ++P + S H ++ +P K
Sbjct: 328 KFSAIPSIDFDTEDMPDIPAFEEKISSEPPKVHYNTDYNPFK 369
>gi|423294558|ref|ZP_17272685.1| DNA mismatch repair protein mutL [Bacteroides ovatus CL03T12C18]
gi|392675749|gb|EIY69190.1| DNA mismatch repair protein mutL [Bacteroides ovatus CL03T12C18]
Length = 633
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 189/402 (47%), Gaps = 50/402 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G + V+ GS+ E ++ G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKLVIAGSQV-------ESQEAISCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNI 172
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
RIALVHP+V+F +SE L S +++ FG + L ++ N
Sbjct: 173 LAEFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIDVNTT 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 230 MVKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV--------------------- 268
Query: 298 GKRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
+ Q PA Y + + D+ P KT + F++ + + + +++ +
Sbjct: 269 -MEAYEQLIPAGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLG 327
Query: 353 KKIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS--SPLK 392
K A S D D + ++P + S H ++ +P K
Sbjct: 328 KFSAIPSIDFDTEDMPDIPAFEEKISSEPPKVHYNTDYNPFK 369
>gi|357049103|ref|ZP_09110332.1| hypothetical protein HMPREF9478_00315 [Enterococcus saccharolyticus
30_1]
gi|355384403|gb|EHG31471.1| hypothetical protein HMPREF9478_00315 [Enterococcus saccharolyticus
30_1]
Length = 710
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 164/332 (49%), Gaps = 36/332 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I L E + N + +G V+ VV+ELV N+VDAG+T++ +++ ++V+D+
Sbjct: 1 MGKIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + +V +RH ATSK + + DD I T GFRGEAL SI+ VS+L I T
Sbjct: 61 GEGIAEEDVVTAFKRH-ATSK---IHNRDDLFRIRTLGFRGEALPSIASVSILTIETAVK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +KG + R+ GT + +LFYN P R KY+++ + L ++
Sbjct: 117 DASQGSFLRLKGGTVEEHIPANLRQ--GTKITVENLFYNTPARLKYVKTLQTE-LANIGD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIAL HP+V+F+ + +++L T S + +G+E + +N+ D
Sbjct: 174 IVNRIALSHPEVAFRLV--HEGNKMLTTTGSGDLKQTIAGIYGVETAKKMLAINSEDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+++GY+S P + + + + IN R C ++ N + G
Sbjct: 232 KLTGYVSLPEVTRASRNYLSTIINGR-------------------CIRNFALNKAIVAGY 272
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHV 331
SK L+ R P ++ ++T DPL V
Sbjct: 273 GSK-------LMVGRFPIAVLEITMDPLLVDV 297
>gi|306832429|ref|ZP_07465582.1| DNA mismatch repair protein HexB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304425469|gb|EFM28588.1| DNA mismatch repair protein HexB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 647
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 172/356 (48%), Gaps = 43/356 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI++D + L RH ATSK+ + AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 61 GEGIAQDDVALSLHRH-ATSKIKNQADL---FRIRTLGFRGEAIPSIASISHFTVKTATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G V KG + E+++ VGT + +LFYN P R KYM+S ++
Sbjct: 117 DENYGTLLVAKGGEI-------EKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F I+ + + T S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFSLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
D E+SGYIS P + + + + + IN RY+ ++ N
Sbjct: 226 NADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNR 266
Query: 294 GFLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
L G SK P +++++ L D+ P K V + +++ I AI
Sbjct: 267 AILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMSLISSAI 322
>gi|237719068|ref|ZP_04549549.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_2_4]
gi|229451447|gb|EEO57238.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_2_4]
Length = 633
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 189/402 (47%), Gaps = 50/402 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G + V+ GS+ E ++ G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKLVIAGSQV-------ESQEAISCSKGSNFSIKNLFFNVPARRKFLKANSTE-LSNI 172
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
RIALVHP+V+F +SE L S +++ FG + L ++ N
Sbjct: 173 LAEFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIDVNTT 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 230 MVKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV--------------------- 268
Query: 298 GKRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
+ Q PA Y + + D+ P KT + F++ + + + +++ +
Sbjct: 269 -MEAYEQLIPAGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLG 327
Query: 353 KKIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS--SPLK 392
K A S D D + ++P + S H ++ +P K
Sbjct: 328 KFSAIPSIDFDTEDMPDIPAFEEKISSEPPKVHYNTDYNPFK 369
>gi|227877608|ref|ZP_03995662.1| DNA mismatch repair protein MutL [Lactobacillus crispatus JV-V01]
gi|256844549|ref|ZP_05550035.1| DNA mismatch repair protein MutL [Lactobacillus crispatus
125-2-CHN]
gi|256849062|ref|ZP_05554495.1| DNA mismatch repair protein mutL [Lactobacillus crispatus MV-1A-US]
gi|262047544|ref|ZP_06020499.1| DNA mismatch repair protein MutL [Lactobacillus crispatus MV-3A-US]
gi|312977891|ref|ZP_07789637.1| DNA mismatch repair protein HexB [Lactobacillus crispatus CTV-05]
gi|227862802|gb|EEJ70267.1| DNA mismatch repair protein MutL [Lactobacillus crispatus JV-V01]
gi|256613627|gb|EEU18830.1| DNA mismatch repair protein MutL [Lactobacillus crispatus
125-2-CHN]
gi|256713838|gb|EEU28826.1| DNA mismatch repair protein mutL [Lactobacillus crispatus MV-1A-US]
gi|260572120|gb|EEX28685.1| DNA mismatch repair protein MutL [Lactobacillus crispatus MV-3A-US]
gi|310895198|gb|EFQ44266.1| DNA mismatch repair protein HexB [Lactobacillus crispatus CTV-05]
Length = 641
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 178/364 (48%), Gaps = 36/364 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MSKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI+RD + L RH ATSK +A+ D + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRH-ATSK---IANEHDLFKVSTLGFRGEALASISAVSHVEILT- 113
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
A G R G G +D GT + +DLF+N P R KY++SS +++ V
Sbjct: 114 ATENAIGIRANYSGGNK--KGQEDAAARKGTKITVKDLFFNTPARLKYLRSSRTEIMKIV 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R+AL +P VSF + + LL T +++ + + +G +++ A D
Sbjct: 172 -DIINRLALGYPHVSFTLSN--TGKILLRTPGNNNLKQTVANVYGRHIAEKMEKFEAKDS 228
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+I+G +S P + S + F + +N RY+ +++ N L
Sbjct: 229 DFKITGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQLNTAILD 269
Query: 298 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
G SK A P +L ++ L D+ P K V + + I AI + ++K+
Sbjct: 270 GYGSKLAARHYPIIVLAIKVDPLLVDVNVHPTKQEVRLSKEKELGRLITSAISNTLVEKV 329
Query: 356 AHDS 359
S
Sbjct: 330 GQIS 333
>gi|153809079|ref|ZP_01961747.1| hypothetical protein BACCAC_03387 [Bacteroides caccae ATCC 43185]
gi|423216752|ref|ZP_17203248.1| DNA mismatch repair protein mutL [Bacteroides caccae CL03T12C61]
gi|149128412|gb|EDM19631.1| DNA mismatch repair domain protein [Bacteroides caccae ATCC 43185]
gi|392629282|gb|EIY23289.1| DNA mismatch repair protein mutL [Bacteroides caccae CL03T12C61]
Length = 633
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 182/378 (48%), Gaps = 46/378 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A V V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNVHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKLVIAGSKV------ESQEAVSCSKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L S +++ FG + L + N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSE---LFNLPVSPLRQRIMAIFGKKLNQQLLNIEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ISGY++ P + A QY ++N RY+ HK A D +
Sbjct: 231 VKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHK------AVMDAYE----------- 273
Query: 299 KRSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q P +Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 -----QLIPVGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELP 371
A S D D + ++P
Sbjct: 329 FSAIPSIDFDTEDMPDIP 346
>gi|193213544|ref|YP_001999497.1| DNA mismatch repair protein MutL [Chlorobaculum parvum NCIB 8327]
gi|238692607|sp|B3QL59.1|MUTL_CHLP8 RecName: Full=DNA mismatch repair protein MutL
gi|193087021|gb|ACF12297.1| DNA mismatch repair protein MutL [Chlorobaculum parvum NCIB 8327]
Length = 626
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 176/356 (49%), Gaps = 34/356 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDD 59
M +I +LP+ V N + +G V+ VV+EL+ NS+D+GA+ + V + V+++D+
Sbjct: 1 MPSIAKLPDIVANKISAGEVVQRPASVVKELLENSIDSGASAITVVIKEAGRQLVRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ D +L ER A TSK+ +D+DD + T GFRGEALASIS VS E+ T+
Sbjct: 61 GCGMDSDDALLSVERFA-TSKI---SDVDDLNALRTLGFRGEALASISSVSHFELKTRRQ 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G + + G + G + + GT++ R+LF+N P RRK+++S+ + H + +
Sbjct: 117 SEPVGIQLISNGGEI--EGPQPAQCEPGTSISVRNLFFNVPARRKFLKSNATEFKH-IHE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFS-FLDEVNANDGA 238
V L +P++ ++ I+ + E T L S F E F L EV +
Sbjct: 174 TVKAFVLAYPEIEWRLINDDHELFYFRTPDVRERL----SHFYGEGFGESLIEVTEENDY 229
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ I GY+ P + K QY YIN R + + + + A L+
Sbjct: 230 MTIGGYLGKPGMMVRQKYDQYFYINRRLIQNRMLVQAVQQAYAE------------LLEE 277
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEP----VLAFIERAIRSA 350
++S P LL L SL D+ P K V F+D + V ++RA+R+A
Sbjct: 278 RQS-----PFALLFLGLDPSLVDVNVHPAKLEVKFEDEKSIRSMVYPVVKRAVRTA 328
>gi|372488216|ref|YP_005027781.1| DNA mismatch repair protein MutL [Dechlorosoma suillum PS]
gi|359354769|gb|AEV25940.1| DNA mismatch repair protein MutL [Dechlorosoma suillum PS]
Length = 618
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 170/364 (46%), Gaps = 38/364 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP+ + + + +G V+ V++E++ N++DAG+ + + + ++V DDG G
Sbjct: 3 IRLLPDLLISQIAAGEVVERPASVLKEVLENALDAGSQAIQIQLEEGGVKLIRVSDDGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ L L RHA TSK+ L D++ + T GFRGEALAS++ V+ L + ++A G
Sbjct: 63 IPQEELPLALTRHA-TSKIASLEDLEQ---VATLGFRGEALASVAAVARLTLTSRAAGAG 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+ ++ GS + GT V RDL+YN P RRK+++S + H V
Sbjct: 119 HAWKLAAHGSGE----AEPAALAAGTVVEMRDLYYNTPARRKFLKSEGTEFAHCA-DAVK 173
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 238
R+AL HP V+F S S P A L G I FL E V A
Sbjct: 174 RVALAHPGVAFSLAHN-------GRVSLSLPKADLAGRVGAILGQDFLAECRRVEAAING 226
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I GY + P S + QYV++N R+V KLL H +A L G
Sbjct: 227 LSIVGYAAQPAWSRPGRDAQYVFVNGRFVRD----KLLAHAL--------REAYQDMLHG 274
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
R P Y L + + D+ P KT V F+D V F+ A+ A + I+
Sbjct: 275 SRH-----PGYALFIEIDPAAVDVNVHPAKTEVRFRDGRAVHQFVYHAVHKALSQVISDP 329
Query: 359 SFDV 362
S +V
Sbjct: 330 SREV 333
>gi|330831909|ref|YP_004400734.1| DNA mismatch repair protein MutL [Streptococcus suis ST3]
gi|329306132|gb|AEB80548.1| DNA mismatch repair protein MutL [Streptococcus suis ST3]
Length = 645
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 169/357 (47%), Gaps = 37/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G + VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGGGIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RH ATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRH-ATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H
Sbjct: 117 DSAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
V V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 172 V-DVVNRLSLAHPEMAFALVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAED 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ISGY+S P + + + + ++IN RY+ ++ N L
Sbjct: 229 LDFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 270 EGYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|171057810|ref|YP_001790159.1| DNA mismatch repair protein MutL [Leptothrix cholodnii SP-6]
gi|170775255|gb|ACB33394.1| DNA mismatch repair protein MutL [Leptothrix cholodnii SP-6]
Length = 651
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 168/348 (48%), Gaps = 31/348 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVV-DDGSG 62
I LP+ + + + +G V+ VV EL+ N++DAGA ++ + + +V DDG+G
Sbjct: 16 IRELPDELISQIAAGEVIERPGSVVRELLDNALDAGARQITLRLAAGGVRAILVEDDGAG 75
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I D L L +RHA TSK+ L D++ +GT GFRGEALA++ V+ L I ++
Sbjct: 76 IPADELPLALKRHA-TSKITSLHDLEQ---VGTMGFRGEALAALGAVAELAITSRTADSA 131
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+ R + + + + VGTTV R+LF+ P RRK++++ ++ H + + V
Sbjct: 132 HAMRIDARSGE-----LAPAARSVGTTVEVRELFFATPARRKFLKTDATELAHCL-EAVR 185
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R AL P V+F E LL + +P + G E + EV A G L++
Sbjct: 186 RHALARPAVAFAVWH---EGRLLEQWRAGTPEQRVRDVLGEEFIAASREVTAQAGPLQVY 242
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G + P + + QY Y+N R+V +L+ H S A L G R
Sbjct: 243 GRVGLPEAARARADLQYAYVNGRHVRD----RLVAHGVRS--------AYEDVLHGSRQ- 289
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P+Y+L + P D+ P K+ V F+D V + R++ +A
Sbjct: 290 ----PSYVLFVDVPPERVDVNVHPTKSEVRFRDSREVHQALRRSVEAA 333
Score = 42.4 bits (98), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 74/196 (37%), Gaps = 16/196 (8%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
+ L Q+ ++ L ++D HAA ERI E L+ + S G + E P
Sbjct: 448 RALAQLGGAYVLAENRRGLVIVDMHAAHERIVYERLKQSLASRRGAAEG-----NENGAP 502
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1287
I Q + A I + L+L V+ L + P L D
Sbjct: 503 GIEAQPMLIPATFAATPTEIATAEVHAATLLQLGLDLTPLSAGVLALRSRPA----ALRD 558
Query: 1288 VDLLEFLQQ-LADTDGSSTTPPSVL------RVLNSKACRGAIMFGDSLLPSECALIVEE 1340
D + + LA+ S+T S L +L + AC GA+ L E ++ +
Sbjct: 559 ADPVALARSVLAELGQSATGEASTLVQRAHDEILATMACHGAVRANRRLTLEEMNALLRD 618
Query: 1341 LKQTSLCFQCAHGRPT 1356
++ T C HGRPT
Sbjct: 619 METTDRADLCNHGRPT 634
>gi|423280572|ref|ZP_17259484.1| DNA mismatch repair protein mutL [Bacteroides fragilis HMW 610]
gi|404583779|gb|EKA88452.1| DNA mismatch repair protein mutL [Bacteroides fragilis HMW 610]
Length = 626
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 187/395 (47%), Gaps = 46/395 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRIIIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L C ++S FG + L V N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSELFNLPACHLRQ---RILSIFGKKLNQQLLSVEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 231 VKVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 274 -----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS 388
A S D D + ++P H +S
Sbjct: 329 FNAVPSIDFDTEDMPDIPAFEQNLPPEPPKVHFNS 363
>gi|312865750|ref|ZP_07725972.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus downei F0415]
gi|311098625|gb|EFQ56847.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus downei F0415]
Length = 651
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 167/350 (47%), Gaps = 31/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ + VV+ELV N++DAG+T++ V + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVVERPSSVVKELVENAIDAGSTQITVEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI D + L RH ATSK+ + AD+ I T GFRGEAL SI+ +S L I T
Sbjct: 61 GQGIENDDVALSLRRH-ATSKIKNQADL---FRIRTLGFRGEALPSIASISDLTIKTAVK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G V KG + L + VGT + DLF+N P R KYM+S ++ H V
Sbjct: 117 GADYGTLLVAKGGEI--LSQEPISTPVGTKITVEDLFFNTPARLKYMKSLQAELGHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R +L HP+++F I+ EL T + + +G+ + E++ +D
Sbjct: 174 VINRQSLGHPEIAFILIN--EGRELTKTAGTGDLRQAIAGIYGLTTAKKMVEISNSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 232 KVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
SK P +++++ L D+ P K V + ++ I AI
Sbjct: 273 GSKLMVGRFPLAVIDIQIDPYLADVNVHPTKQEVRISKEKELMQLIREAI 322
>gi|293381578|ref|ZP_06627565.1| DNA mismatch repair protein, C-terminal domain protein
[Lactobacillus crispatus 214-1]
gi|290921848|gb|EFD98863.1| DNA mismatch repair protein, C-terminal domain protein
[Lactobacillus crispatus 214-1]
Length = 641
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 179/365 (49%), Gaps = 38/365 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MSKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI+RD + L RH ATSK +A+ D + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRH-ATSK---IANEHDLFKVSTLGFRGEALASISAVSHVEILT- 113
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
A G R G G +D GT + +DLF+N P R KY++S +++ +V
Sbjct: 114 ATENAIGIRANYSGGNK--KGQEDAAARKGTKITVKDLFFNTPARLKYLRSPRTEIMKTV 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAND 236
+ R+AL +P VSF + + ++L ++ L I++ +G +++ A D
Sbjct: 172 -DIINRLALGYPHVSFT---LSNTGKILLRTPGNNNLKQTIANVYGRHIAEKMEKFEAKD 227
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+I+G +S P + S + F + +N RY+ +++ N L
Sbjct: 228 SDFKITGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQLNTAIL 268
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK A P +L ++ L D+ P K V + + I AI + ++K
Sbjct: 269 DGYGSKLAARHYPIIVLAIKVDPLLVDVNVHPTKQEVRLSKEKELGRLITSAISNTLVEK 328
Query: 355 IAHDS 359
+ S
Sbjct: 329 VEQIS 333
>gi|406579046|ref|ZP_11054334.1| DNA mismatch repair protein, partial [Streptococcus sp. GMD6S]
gi|404453139|gb|EKA00229.1| DNA mismatch repair protein, partial [Streptococcus sp. GMD6S]
Length = 267
Score = 135 bits (339), Expect = 2e-28, Method: Composition-based stats.
Identities = 88/268 (32%), Positives = 144/268 (53%), Gaps = 10/268 (3%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEVEE--VIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLI--SDGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYV 267
EISG++S P + + + + ++IN RY+
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI 259
>gi|168492131|ref|ZP_02716274.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC0288-04]
gi|418192878|ref|ZP_12829374.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47439]
gi|183573591|gb|EDT94119.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC0288-04]
gi|353861025|gb|EHE40964.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47439]
Length = 649
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V +LF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEV--EEVIPATSPVGTKVCVENLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 232 KISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGF 272
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 273 GSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ--- 329
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQ 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 -TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVA 378
Query: 416 KDPVELAEENTEMEFFSQ 433
VEL +E ++ F++
Sbjct: 379 DYQVELTDEGQDLTLFAK 396
>gi|310821741|ref|YP_003954099.1| DNA mismatch repair protein MutL [Stigmatella aurantiaca DW4/3-1]
gi|309394813|gb|ADO72272.1| DNA mismatch repair protein MutL [Stigmatella aurantiaca DW4/3-1]
Length = 602
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 174/367 (47%), Gaps = 31/367 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I RL + + N + +G V+ VV+ELV NS+DAGA V V + G + V DD
Sbjct: 1 MARIARLRDDLINKIAAGEVVERPASVVKELVENSLDAGAHTVQVALEGGGLQRIVVSDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R+ VL ERHA TSKL ++DD + + GFRGEAL +I+ VS + T
Sbjct: 61 GHGMGREDAVLCLERHA-TSKL---RELDDLENLVSKGFRGEALPAIAAVSRFTLHTAEP 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R ++G L+ +++ VGT + DLFYN P R K+M+ ++ H V++
Sbjct: 117 EAEVGTRVTVEGGAGLH--VEEAPPRVGTVMTVEDLFYNTPARLKFMRRGETELKH-VEE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V+RIAL HP+VSF ++ P + ++ G + L V L
Sbjct: 174 AVIRIALAHPEVSF-LVEHGGLPLFTSPACPEDPTERIAAALGTDVHPHLFSVEERRLGL 232
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I+G+I+SP ++ Y ++N RYV D G+ +
Sbjct: 233 SITGHIASPEYTLPTARGIYTFVNHRYV---------------RDRGLIGAIQRGYQEYL 277
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-WMKK 354
S Q +++ PH++ D+ P K V F D ++ VLA I R +R+A W+
Sbjct: 278 PSGRQPLVVLFIDVE-PHAV-DVNVHPQKMEVRFADSRGVYDAVLAAIVRTLRAAPWLGP 335
Query: 355 IAHDSFD 361
+ D
Sbjct: 336 TPPEGGD 342
Score = 42.4 bits (98), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 73/187 (39%), Gaps = 27/187 (14%)
Query: 1183 GGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIK 1242
GGTL V+D HAA ER+RL + H++L EGK+ + LP + L E +
Sbjct: 434 GGTLVVLDPHAALERVRLMDF-HRLLE-EGKTPPPSLFGTTVELPVPAARALMGGRESLA 491
Query: 1243 DWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG 1302
G ++ G SF L AVP L D L+ L+
Sbjct: 492 LLG--IDVEPFGGTSF--------------ALKAVPP----GLEGADPRALLEALSHALP 531
Query: 1303 SSTTPPSVL---RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT-- 1357
+ TPP + L AC A D L ++ ++ EL C HG
Sbjct: 532 PAGTPPDAVGLAEALRVMACHAAQTASDKLTDAQLRALLGELDAADFHPTCRHGTVVVLE 591
Query: 1358 VPLVNLE 1364
+PL+ LE
Sbjct: 592 MPLLELE 598
>gi|322371529|ref|ZP_08046075.1| DNA mismatch repair protein MutL [Haladaptatus paucihalophilus
DX253]
gi|320548820|gb|EFW90488.1| DNA mismatch repair protein MutL [Haladaptatus paucihalophilus
DX253]
Length = 734
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 166/350 (47%), Gaps = 27/350 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I L E + +G V+ VV+ELV NS+DA A+++ V V G + V DDG G
Sbjct: 8 IRALSETTIQRIAAGEVVERPASVVKELVENSLDADASRISVRVDGGGTERIAVTDDGIG 67
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+SR+ + + E H TSK+ + D++ +G+ T GFRGEAL +I VS +I TK G
Sbjct: 68 MSREDVQIAVEEHT-TSKIRDIDDLE--SGVATLGFRGEALYTIGAVSRTKIRTKPRGGE 124
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+G + G G+ GTTV DLF+N P RRKY+++ + H V + V
Sbjct: 125 SGTELRLVGGDV--EGVGPAGCPEGTTVEVEDLFFNTPARRKYLKTDSTEFAH-VNRVVT 181
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
+ AL +P V+F E+ T + + ++S +G E + + V+ D A++ S
Sbjct: 182 QYALANPDVAFSL--EHDGREVFSTTGRGNLQSTILSVYGREVATAMIAVDGGD-AVDAS 238
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GY+S P + S + + Y+N RYV + + + D + A + +
Sbjct: 239 GYVSHPETTRSTREYVATYVNGRYVRSSVVREAI------LDAYGNQLAPDRY------- 285
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
P +L L P D+ P K V F D V + A++ A +
Sbjct: 286 ----PFAVLFLDVPADSVDVNVHPRKMEVRFGDEARVKTAVRDAVQDALL 331
Score = 47.4 bits (111), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 20/193 (10%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
++L Q+ ++ L +IDQHAADER+ E L + V E EL
Sbjct: 536 RILGQLHDTYVVAETDDGLVLIDQHAADERVNYERLCRQFAGDTTTQVLASSVELELTAA 595
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1287
E L ++ E + G+ + + R + V T VP +F LS
Sbjct: 596 EAA--LFDDYREALARLGFHAAL-------------VDDRTVEVTT---VPAVFEKTLSP 637
Query: 1288 VDLLEFLQQL--ADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1345
L + L + ++ G+++ +++ AC +I SL + ++ L +
Sbjct: 638 DLLRDVLSEFISVESGGANSAEAVADELISDLACYPSITGNTSLREGDVVSLLAALDECE 697
Query: 1346 LCFQCAHGRPTTV 1358
+ C HGRP +
Sbjct: 698 NPYACPHGRPVVI 710
>gi|228992456|ref|ZP_04152384.1| DNA mismatch repair protein mutL [Bacillus pseudomycoides DSM
12442]
gi|228767277|gb|EEM15912.1| DNA mismatch repair protein mutL [Bacillus pseudomycoides DSM
12442]
Length = 643
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 188/402 (46%), Gaps = 42/402 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE++T
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELVTSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLIIKGGDIIMQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L + + I+ L +
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEVESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIRGYVTLPEVTRASRNYISTIVNGRYVRNYVLMKAIQ------------QGYHTLLPVG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
R P +++ L D+ P K V F + +L IE+ ++ A+ K
Sbjct: 279 R-----YPIGFVSIEMDPMLVDVNVHPAKLEVRFSKEQELLQLIEKTLQDAFKK------ 327
Query: 360 FDVDMLEDAELPL------ESSRFQSHQSSTHLHSSPLKNLA 395
+ ++ DA + ES + Q H T PL N+
Sbjct: 328 --IQLIPDAGVTSKKKEKDESVQEQFHFEHTKPKEVPLPNIV 367
>gi|21674838|ref|NP_662903.1| DNA mismatch repair protein MutL [Chlorobium tepidum TLS]
gi|25090732|sp|Q8KAX3.1|MUTL_CHLTE RecName: Full=DNA mismatch repair protein MutL
gi|21648059|gb|AAM73245.1| DNA mismatch repair protein MutL [Chlorobium tepidum TLS]
Length = 624
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 178/355 (50%), Gaps = 32/355 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M +I RLP+ V N + +G V+ VV+EL+ NS+DAGA+++ V + V+++D+
Sbjct: 1 MASIARLPDIVANKISAGEVVQRPASVVKELIENSIDAGASRITVIIKDAGRQLVQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ D ++L ER ATSK+ + D+D + T GFRGEALASIS VS E+ T+
Sbjct: 61 GCGMESDDVLLSVERF-ATSKISEVDDLD---ALRTLGFRGEALASISSVSHFELKTRKA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G N +++ + + + GT++ R+LF+N P RRK+++S+ + H + +
Sbjct: 117 G--NSLGTLLRSDGGVIETPQPAQCEPGTSIAVRNLFFNVPARRKFLKSNATEFKH-IHE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V L +P++ ++ M ++DE L +S L +G L EV + +
Sbjct: 174 TVKAFVLSYPEIEWR---MMNDDEELFHFRTSDVRERLSHFYGEGFGESLIEVTEENDYM 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY+ P + K QY +IN R + L+ + ++ G+
Sbjct: 231 TIGGYLGKPGMMVRQKYDQYFFINRRLIQN---RMLVQAVQQAY--------------GE 273
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF----IERAIRSA 350
+ + P LL L SL D+ P K V F+D + + + ++RA+R+A
Sbjct: 274 LLEERQSPFALLFLGLDPSLVDVNVHPAKLEVRFEDEKSIRSMVYPVVKRAVRTA 328
>gi|375255212|ref|YP_005014379.1| DNA mismatch repair protein, C-terminal domain-containing protein
[Tannerella forsythia ATCC 43037]
gi|363407157|gb|AEW20843.1| DNA mismatch repair protein, C-terminal domain protein [Tannerella
forsythia ATCC 43037]
Length = 608
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 182/377 (48%), Gaps = 30/377 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+ + N + +G V+ VV+EL+ N+VDA AT++ V + V+V D+G G
Sbjct: 5 IHLLPDHIANQIAAGEVIQRPASVVKELMENAVDAEATEIIVNIKDAGRTLVQVTDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ +D D + T GFRGEALASI+ V+ +E+ T+A
Sbjct: 65 MSETDARMAFERHA-TSKI---SDAKDLYALRTMGFRGEALASIAAVAQVELRTRARDAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G R + GS + I+ + G ++LFYN PVRRK+++S+ + ++
Sbjct: 121 LGTRLSICGS--VLESIEADACIQGAIFSIKNLFYNVPVRRKFLKSNETE-FRNIMTEFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+ALVHP ++FK ++E + +S +++ FG L + + ++I
Sbjct: 178 RVALVHPPIAFKLYHNDTE---VMNLPASGLRQRIVNVFGKSFSPKLLPLESATSLVKIE 234
Query: 243 GYISSPYDSISVKAFQ-YVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
G+I D++ + +Q Y ++N RY+ HK + H + +
Sbjct: 235 GFIGR-TDTVRRRGYQNYFFVNGRYMRHPYFHKAVMHAYEPLIPASEY------------ 281
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFD 361
P Y + + S D+ P KT + F++ +P+ + A+R A K + S D
Sbjct: 282 -----PDYFIYITLDPSEIDVNIHPTKTEIKFENEQPIWQILSSAVREALGKSNSVPSID 336
Query: 362 VDMLEDAELPLESSRFQ 378
D ++P + Q
Sbjct: 337 FDTEGAIDIPTYNPSMQ 353
>gi|311748627|ref|ZP_07722412.1| DNA mismatch repair protein MutL [Algoriphagus sp. PR1]
gi|126577153|gb|EAZ81401.1| DNA mismatch repair protein MutL [Algoriphagus sp. PR1]
Length = 616
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/442 (29%), Positives = 207/442 (46%), Gaps = 50/442 (11%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
I LP+A+ N + +G V+ ++EL+ NS+D+GATK+ V V ++V+D+G
Sbjct: 4 VIQLLPDAIANQIAAGEVVQRPASALKELLENSIDSGATKIQVVVKDAGKQLIQVIDNGK 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+S + ERH ATSK+ D+ I TFGFRGEALASI+ V+ +E+ TK
Sbjct: 64 GMSPTDARMSFERH-ATSKIRSSKDL---FSIRTFGFRGEALASIAAVAQVELKTKPANA 119
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G ++GS+ I ++ GT+V ++LF+N P RR +++S+P ++ H V
Sbjct: 120 DLGTLIQIEGSE-----IKNQEPIAATEGTSVCMKNLFFNVPARRNFLKSNPVEMRHLVD 174
Query: 179 KCVLRIALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ R+AL +P++SF D+E + L S ++ FG L
Sbjct: 175 E-FQRVALSYPEISFSLYQQDLEMFNLLPGKLSQR-----IVGLFGKNYQGQLVPCEELT 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ I GYI P ++ + Q+ ++N+RY+ LNH ++ A G +
Sbjct: 229 PHINIKGYIGKPENAKKTRGEQFFFVNNRYIKSS----YLNHAVSN--------AFEGLI 276
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
+S P Y+L L S D+ P KT + F D V A I A++ A A
Sbjct: 277 -----QSDQHPFYVLFLEIDPSHIDINVHPTKTEIKFDDERTVYAVIRSAVKQALG---A 328
Query: 357 HD-------SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERI 409
H SFDV+ E+ + E + S +++P K + K E
Sbjct: 329 HHVVPSLDFSFDVNYTENWDKNPEKKEQVDREYSYKSYNTP--EFKKSSASGWEKLFEGN 386
Query: 410 TFQEFQKDPVELAEENTEMEFF 431
T Q+ Q+ P + EE E+ F
Sbjct: 387 TPQKTQEQPRDENEEEPEVLTF 408
>gi|357638916|ref|ZP_09136789.1| DNA mismatch repair protein [Streptococcus urinalis 2285-97]
gi|357587370|gb|EHJ56778.1| DNA mismatch repair protein [Streptococcus urinalis 2285-97]
Length = 656
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 190/392 (48%), Gaps = 41/392 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV N++DA +T++ + + + + D+
Sbjct: 1 MAKIIELPEVLANQIAAGEVVERPSSVVKELVENAIDAASTQITIEIEESGLKSIIITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + + L RH ATSK+ + AD+ I T GFRGEAL S++ +S + I T
Sbjct: 61 GEGMSPEDVALSLRRH-ATSKIKNQADL---FRIRTLGFRGEALPSVASISEITIKTATR 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G KG + + VGT + +LFYN P R KYM+S ++ H V
Sbjct: 117 DSKSGTLLKAKGGEITLQEVTS--TPVGTKISVENLFYNTPARLKYMKSLQAELSHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
+ R +L HP+++F+ I+ E L S + L IS +G+ + E++A+D
Sbjct: 174 VINRQSLAHPEIAFRLINDGRE---LTRTSGTGNLRQAISGIYGLNTARKMIEISASDLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
LEISGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 231 LEISGYISLPELTRANRNYITLLINGRYI-------------------KNFLLNRAILDG 271
Query: 299 KRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
SK P ++N+ L D+ P K V ++A I +AI+++ ++
Sbjct: 272 YGSKLMVGRFPIAVINIDIDPYLADVNVHPTKQEVRISKERELMALISQAIQNSLREQ-- 329
Query: 357 HDSFDVDMLEDAELPLESSRF--QSHQSSTHL 386
+ D LE+ L S+R +S Q+S +L
Sbjct: 330 --ALIPDALEN--LAKSSTRIKNKSEQTSFYL 357
>gi|228470609|ref|ZP_04055466.1| DNA mismatch repair protein MutL [Porphyromonas uenonis 60-3]
gi|228307736|gb|EEK16712.1| DNA mismatch repair protein MutL [Porphyromonas uenonis 60-3]
Length = 646
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 193/395 (48%), Gaps = 41/395 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ +++ELV N++DA AT++ + + ++V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASMLKELVENAIDAHATQIAIELQDAGKELMRVIDDGVG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +DD + + GFRGEALASI V+ +E+IT+
Sbjct: 65 MSPLDARMAFERHA-TSKI---SSVDDLFTLRSMGFRGEALASIVAVAQIELITRQADSD 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
GY+ ++ GS+ + ++GT++ ++LFYN P RR++++ S ++ H + +
Sbjct: 121 IGYKLLINGSEVISSA--PTVAEIGTSITVKNLFYNVPARRRFLKGSETELRH-IYRQFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+P+++F + SE +L+ S ++ G L + +S
Sbjct: 178 RIALVYPEIAFT---LYSEGKLIRNLPKSDLQHRIVDLLGKSYSKQLIPIEYQGPLANVS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+I+ P D+ A Q+ ++N RY+ H+ + ++ S
Sbjct: 235 GFITLPRDAKRRGAQQFFFVNGRYMKHPYFHRAVMNVFEDLVAPGSQ------------- 281
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR-----SAWMKKIAH 357
P Y + + S D+ P KT + F D + + + +R ++ M I
Sbjct: 282 ----PNYFIYFQVDPSRIDVNIHPTKTEIKFLDEQAIFKLLMVVLREHLSTTSAMPAI-- 335
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLK 392
+F D L E+P + + QSST L P++
Sbjct: 336 -TFSTDQL--IEIPAYDA---TRQSSTALQPPPVQ 364
>gi|313896663|ref|ZP_07830211.1| DNA mismatch repair family protein [Selenomonas sp. oral taxon 137
str. F0430]
gi|312974580|gb|EFR40047.1| DNA mismatch repair family protein [Selenomonas sp. oral taxon 137
str. F0430]
Length = 621
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 173/357 (48%), Gaps = 33/357 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+ELV N++DAGAT + + + G +++V D+
Sbjct: 1 MKRIHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGATAIEIEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R RHA TSK+ +AD+ +GT GFRGEAL +I+ VS +IT+
Sbjct: 61 GRGMERPDAETAILRHA-TSKISTVADLQT---VGTLGFRGEALPTIASVSRFSLITRTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G K I+D DVGTTV DLF+N P R+K+++ + +
Sbjct: 117 DADLGTRVEILGGKTTE--IEDAGCDVGTTVRVEDLFFNTPARKKFLKMD-RTEAGKISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND--G 237
V+ +AL P ++F+F++ + L T S + S +G + L ++ D G
Sbjct: 174 YVIMLALSRPDIAFRFVN--NNRLTLMTAGDDSLRRAIESIYGGDAAGALIPLDFTDEAG 231
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ I+GYIS P S +A+Q +N R + I K ++++ + GF
Sbjct: 232 DIRITGYISKPSMIRSSRAWQTYIVNGRTIQNRAIAKAIDNV------YRALVPKMGF-- 283
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA 350
P +L + P D+ P KT + F+D ++ V ++ A+R A
Sbjct: 284 ---------PLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKTVQGAVRGA 331
Score = 53.5 bits (127), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 50/204 (24%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1216
+ QVD +I + L +IDQHAA ERI + L H +LS + + +
Sbjct: 435 IGQVDLTYIVAQSTRALYIIDQHAAHERILFDRFCALAEGIPSQQMLVHAILSFDAREMQ 494
Query: 1217 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
Y++ EL +G+++ G R + L
Sbjct: 495 YIEENAEL-FSRLGFRM-----------------EPAGDREYR--------------LTE 522
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV--LNSKACRGAIMFGDSLLPSEC 1334
P + ++ + E L L + ++ P+ LR L + ACR AI G+ L +
Sbjct: 523 SPADVPTDEAEDVIREILVSLGELHAAT---PAELRQAGLATMACRAAIKAGEELSFRQM 579
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTV 1358
+++EEL+ T F C HGRPT +
Sbjct: 580 EILLEELRTTPFPFTCPHGRPTIL 603
>gi|262383881|ref|ZP_06077017.1| DNA mismatch repair protein MutL [Bacteroides sp. 2_1_33B]
gi|262294779|gb|EEY82711.1| DNA mismatch repair protein MutL [Bacteroides sp. 2_1_33B]
Length = 615
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 179/370 (48%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+ + N + +G V+ VV+ELV N+VDAGA+ + V + ++V+DDG G
Sbjct: 5 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +D + T GFRGEALASI+ V+ +E+ T+A G
Sbjct: 65 MSETDARMAFERHA-TSKI---STAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGTE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + GS I+ E + G+ ++LF+N P RRK+++S+ + + + +
Sbjct: 121 LGTCLSIAGSNL--ESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINE-FE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+P+V ++E + S +I+ +G L ++A + IS
Sbjct: 178 RIALVNPQVGMSLYHNDAE---IFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A Q+ ++N RY+ HK + +A +
Sbjct: 235 GFVGRPDSAKKRGALQFFFVNGRYMKHPYFHKAI------------MQAYEQLIPAGD-- 280
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P Y + S D+ P KT + F++ +P+ + A R A K A + D
Sbjct: 281 ---MPNYFVYFTLDPSSIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDF 337
Query: 363 DMLEDAELPL 372
D+ + ++P+
Sbjct: 338 DVEDAIDIPV 347
>gi|222153878|ref|YP_002563055.1| DNA mismatch repair protein [Streptococcus uberis 0140J]
gi|254766178|sp|B9DW70.1|MUTL_STRU0 RecName: Full=DNA mismatch repair protein MutL
gi|222114691|emb|CAR43777.1| DNA mismatch repair protein MutL [Streptococcus uberis 0140J]
Length = 660
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 195/423 (46%), Gaps = 56/423 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA + ++ + + +K+ D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPASVVKELVENAIDANSRQITIEIEESGLKSIKITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + L L RHA TSK+ + +D+ I T GFRGEAL SI+ +S L I T
Sbjct: 61 GEGMSEENLPLSILRHA-TSKIKNQSDL---FRIRTLGFRGEALPSIASISELRIETSTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
P G V KG + ER++ VGT + +LFYN P R KYM+S ++
Sbjct: 117 DSPYGSLLVAKGGQI-------ERQEVISTPVGTKITVENLFYNTPARLKYMKSLQSELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+VSF I + + S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLGHPEVSFTLI---CDGREMTKTSGTGDLKQAIAGIYGLNTAKKMIEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
D E+SGY+S P + + + + + IN RY+ ++ N
Sbjct: 226 NADLDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNR 266
Query: 294 GFLKGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
L G SK P +++++ L D+ P K V + ++A I AI +
Sbjct: 267 AILDGYGSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISTAIAESL 326
Query: 352 MKKIAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKECE 407
+ D++ DA L S +S Q+ L SS L Q++ + KE +
Sbjct: 327 KSQ--------DLIPDALENLAKSTVRSSTKYEQTKLPLQSSKLY-FDPQKNDFYIKEPQ 377
Query: 408 RIT 410
+ T
Sbjct: 378 KTT 380
>gi|355628055|ref|ZP_09049570.1| hypothetical protein HMPREF1020_03649 [Clostridium sp. 7_3_54FAA]
gi|354819948|gb|EHF04380.1| hypothetical protein HMPREF1020_03649 [Clostridium sp. 7_3_54FAA]
Length = 684
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 178/372 (47%), Gaps = 35/372 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ VV+EL+ N+VDA +T V V + ++V D+
Sbjct: 1 MANIQVLDQNTINQIAAGEVIERPASVVKELLENAVDAKSTAVTVEIRDGGLSMIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI ++ + L RHA TSK+ ++D + + GFRGEAL+SI+ V+ +E+ITK
Sbjct: 61 GCGIPKEEIPLAFLRHA-TSKI---RTVEDLFTVASLGFRGEALSSIASVAQVELITKTT 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G R ++G + + L ++ GTT ++R+LFYN P RRK++++ + H V
Sbjct: 117 GSMSGSRYQIEGGEEIAL--EEVGAPEGTTFIARNLFYNTPARRKFLKTPMTEGAH-VAD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +IAL HP++S + I ++ L T + + ++ + FG E + L V + +
Sbjct: 174 LVEKIALSHPEISIRLI--QNGQSKLHTSGNHNLKDIIYTIFGREIAANLIAVQSGAEPV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++ G+I P + + ++ +IN RY+ I+K + F +
Sbjct: 232 KVEGFIGKPLIARGNRNYENYFINGRYIKSSLINKAIEDAYKPFMMQHKY---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
P +L D+ P K + F+D E V + I A +K
Sbjct: 282 -------PFTMLQFTIEPEFLDVNVHPAKMELRFRDGEMVYRMVYHTISMALSQK----- 329
Query: 360 FDVDMLEDAELP 371
+++ ELP
Sbjct: 330 ---ELIPQVELP 338
Score = 43.9 bits (102), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 38/189 (20%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKS-------VAYLDAEQELVLPEIGYQLLQNFA 1238
L +IDQHAA E++ E+ + E S + L +EL +L+ +
Sbjct: 515 LYIIDQHAAHEKVLYEKTMASLKKREYTSQMINPPIILTLSGNEEL--------MLKKYM 566
Query: 1239 EQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLA 1298
E G+ I G + + + AVP NL + E L ++
Sbjct: 567 EHFTAVGF--EIEHFGGKEY--------------AVRAVPA----NLFSIAKKELLMEMI 606
Query: 1299 D--TDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1355
D TDG P ++ + S +C+ A+ ++ +E +++EL + + C HGRP
Sbjct: 607 DGLTDGVDQGTPDIINEKIASMSCKAAVKGNHAMSAAEADSLIDELLELENPYACPHGRP 666
Query: 1356 TTVPLVNLE 1364
T + + E
Sbjct: 667 TIITMSKYE 675
>gi|46445773|ref|YP_007138.1| methyl-directed mismatch repair (MMR) protein, mutL [Candidatus
Protochlamydia amoebophila UWE25]
gi|46399414|emb|CAF22863.1| putative methyl-directed mismatch repair (MMR) protein, mutL
[Candidatus Protochlamydia amoebophila UWE25]
Length = 652
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 183/368 (49%), Gaps = 33/368 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ L E N + +G V+ + VV+ELV NS+DAGAT++ V + G +++ D+G G
Sbjct: 7 IHVLTEQTINQIAAGEVIENPASVVKELVENSMDAGATEICVEIQGGGRQLIRISDNGCG 66
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S D +L ERHA TSK+ ++DD I T GFRGEA+ SI+ +S ++T
Sbjct: 67 MSEDDALLCLERHA-TSKI---KNVDDIENILTMGFRGEAIPSIASISKFSLLTTPQSGV 122
Query: 123 NGYRKVMKGSKCLYLG--IDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
+ K+M+GS + G I K GTT+ + LF+N PVRRK+ Q SP +
Sbjct: 123 SSIDKLMQGSLTIVEGGRIQSHGKATRSPGTTIEVKSLFFNVPVRRKF-QRSPNYDTQEI 181
Query: 178 KKCVLRIALVHPKVSFKFI-DMESEDEL-LCTCSSSSPLALL--ISSFGIEDFSF-LDEV 232
K + ++L +P ++F+ I D +S ++ L + + LL I + ++FS L +
Sbjct: 182 VKILTNLSLAYPNIAFELISDQKSILKMPLISIDINHQQQLLKKIETLLGKEFSHSLCPL 241
Query: 233 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 292
+ EI GYI P + QY++IN R V I + +
Sbjct: 242 TFSSPPYEIEGYIGLPSIHKPNRTSQYLFINRRAVYSPLI-------------GVAIREG 288
Query: 293 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
G + G + P ++L+LR P SL+D+ P K V + + + + A++ A
Sbjct: 289 YGTMLG----TNRYPVFILHLRLPGSLFDVNVHPQKKEVRLRQEQKLKETLINAVQKALR 344
Query: 353 KKIAHDSF 360
++ H +F
Sbjct: 345 QENPHQAF 352
>gi|302670849|ref|YP_003830809.1| DNA mismatch repair protein MutL [Butyrivibrio proteoclasticus
B316]
gi|302395322|gb|ADL34227.1| DNA mismatch repair protein MutL [Butyrivibrio proteoclasticus
B316]
Length = 666
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 175/351 (49%), Gaps = 27/351 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M IN L + + + +G V+ VV+ELV N++D+GAT V V + G ++V D+
Sbjct: 1 MAFINELDKNTIDQIAAGEVVERPASVVKELVENAIDSGATAVTVEIKGGGIDMIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI + + +RHA TSKL ++DD I + GFRGEAL+SIS V+ ++ ITK
Sbjct: 61 GSGIEKSQIRKAFKRHA-TSKL---KNIDDLFSIHSLGFRGEALSSISSVAQVDCITKTK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G + G+D+ GTT + R+LFYN P R+K+++ +P+ +
Sbjct: 117 DDLTGTRYSINGGE--EAGMDEIGAPDGTTFIIRNLFYNTPARKKFLK-TPQTEGSYIGD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ +AL +P +SF +I+ ++D+ T + L+ +G + + ++A+D +
Sbjct: 174 VMEHLALDNPTISFHYIN--NKDDKFSTSGNGDLKELIYRIYGRDVSVSVRPISASDHGI 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ GY+ P + S + F+ ++N RYV I K L + +
Sbjct: 232 TVEGYLGEPTLNRSNRNFEIFFVNGRYVKDKIISKALEEGYKQYLMMHKF---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P +L++R S+ D+ P K V F + + FI+ ++ +
Sbjct: 282 -------PFAILHIRMDPSMVDVNVHPAKLEVRFNNQALLYDFIKTSVENV 325
Score = 48.9 bits (115), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 101/254 (39%), Gaps = 35/254 (13%)
Query: 1119 NGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFI 1178
+G N+ S I QD I+ + + L F + K +++ ++L Q+ +
Sbjct: 430 DGSKAEKNDRPSSIIKQQDAIV-VEKKPVQLN--LFDEKVLTKENVKEYEILGQIFGTYW 486
Query: 1179 PVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS-------VAYLDAEQELVLPEIGY 1231
+ + ++DQHAA E++ E + + SG+ S + L A +E + E
Sbjct: 487 IIGFKDKMFMVDQHAAHEKVNYERMMKRYKSGDILSQMVNPPVIVTLSAAEEEIFLE--- 543
Query: 1232 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLSDVDL 1290
+ + + G+ NI G + + A+P +FG +
Sbjct: 544 -----YRQYFEKLGF--NIENFGGHEY--------------AMRAIPVDLFGCDNEKEMF 582
Query: 1291 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1350
E L +L+ TP + + S AC+ ++ + E +++EL + + C
Sbjct: 583 QEILDELSHETSLDRTPDVINYKIASMACKASVKGNTRMTTQEMEALLDELLKLDNPYNC 642
Query: 1351 AHGRPTTVPLVNLE 1364
HGRPT + + E
Sbjct: 643 PHGRPTIISMSKYE 656
>gi|418416982|ref|ZP_12990180.1| DNA mismatch repair protein mutL [Streptococcus urinalis
FB127-CNA-2]
gi|410873038|gb|EKS20974.1| DNA mismatch repair protein mutL [Streptococcus urinalis
FB127-CNA-2]
Length = 654
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 190/392 (48%), Gaps = 41/392 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV N++DA +T++ + + + + D+
Sbjct: 1 MAKIIELPEVLANQIAAGEVVERPSSVVKELVENAIDAASTQITIEIEESGLKSIIITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + + L RH ATSK+ + AD+ I T GFRGEAL S++ +S + I T
Sbjct: 61 GEGMSPEDVALSLRRH-ATSKIKNQADL---FRIRTLGFRGEALPSVASISEITIKTATR 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G KG + + VGT + +LFYN P R KYM+S ++ H V
Sbjct: 117 DSKSGTLLKAKGGEITLQEVTS--TPVGTKISVENLFYNTPARLKYMKSLQAELSHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
+ R +L HP+++F+ I+ E L S + L IS +G+ + E++A+D
Sbjct: 174 VINRQSLAHPEIAFRLINDGRE---LTRTSGTGNLRQAISGIYGLNTARKMIEISASDLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
LEISGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 231 LEISGYISLPELTRANRNYITLLINGRYI-------------------KNFLLNRAILDG 271
Query: 299 KRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
SK P ++N+ L D+ P K V ++A I +AI+++ ++
Sbjct: 272 YGSKLMVGRFPIAVINIDIDPYLADVNVHPTKQEVRISKERELMALISQAIQNSLREQ-- 329
Query: 357 HDSFDVDMLEDAELPLESSRF--QSHQSSTHL 386
+ D LE+ L S+R +S Q+S +L
Sbjct: 330 --ALIPDALEN--LAKSSTRIKNKSEQTSFYL 357
>gi|422021058|ref|ZP_16367572.1| DNA mismatch repair protein [Providencia sneebia DSM 19967]
gi|414099963|gb|EKT61596.1| DNA mismatch repair protein [Providencia sneebia DSM 19967]
Length = 633
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 176/374 (47%), Gaps = 54/374 (14%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDDGS 61
I L + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G
Sbjct: 2 AIQILSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGEKLIRIRDNGC 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI +D L+L RHA TSK+ A +DD I + GFRGEALASIS VS L + +K +
Sbjct: 62 GIGKDELILALARHA-TSKI---ATLDDLEAIMSMGFRGEALASISSVSRLTLTSKPAEQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++ +G + + + + GTTV DLFYN P RRK+M++ + H + + V
Sbjct: 118 SEAWQSYAEG-RDMQVNVKPAAHPNGTTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEIV 175
Query: 182 LRIALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFS 227
RIAL P V+ K + +++ E L C +S L S+
Sbjct: 176 RRIALSRPDVAINLSHNGKLVKQYRAAHDEVQQERRLASICGTSFMQGALAISW------ 229
Query: 228 FLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L I G++ +P S SV QY Y+N R + +L+NH
Sbjct: 230 -------QHGDLGIKGWVVAPSHS-SVIDIQYCYVNGRMMRD----RLINHAIR------ 271
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
+A G L + PAY+L L PH + D+ P K V F V FI +
Sbjct: 272 --QAYEGHLTDNQQ-----PAYVLYLSIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQG 323
Query: 347 IRSAWMKKIAHDSF 360
+R+A + I+ D
Sbjct: 324 VRTALLNAISPDEL 337
>gi|300715038|ref|YP_003739841.1| DNA mismatch repair protein [Erwinia billingiae Eb661]
gi|299060874|emb|CAX57981.1| DNA mismatch repair protein [Erwinia billingiae Eb661]
Length = 627
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 174/382 (45%), Gaps = 53/382 (13%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L + RHA TSK+ +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELSMALARHA-TSKI---TTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTEAQA 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + +
Sbjct: 119 EAWQAYAEG-RDMAVTLKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEIIR 176
Query: 183 RIALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+F + E L C + A L + IE
Sbjct: 177 RIALARFDVAFSLTHNGKLMRQYRGVADHSQRERRLGAICGT----AFLSHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 288
G L + G+++ P S ++ QY Y+N R + +L+NH
Sbjct: 229 -----WQHGDLSLKGWVADPVGSRAITDLQYCYVNGRMMRD----RLINH---------- 269
Query: 289 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
A + K S PAY+L L PH + D+ P K V F V FI + +
Sbjct: 270 --AIRQAYQDKLGDSHQ-PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 325
Query: 348 RSAWMKKIAHDSFDVDMLEDAE 369
S + A DV+ AE
Sbjct: 326 VSVLQEAGAETLPDVEPAAPAE 347
>gi|313149555|ref|ZP_07811748.1| DNA mismatch repair protein mutL [Bacteroides fragilis 3_1_12]
gi|313138322|gb|EFR55682.1| DNA mismatch repair protein mutL [Bacteroides fragilis 3_1_12]
Length = 626
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 187/395 (47%), Gaps = 46/395 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRIIIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L C ++S FG + L V N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSELFNLPACHLRQ---RILSIFGKKLNQQLLSVEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 231 VKVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 274 -----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS 388
A S D D + ++P H +S
Sbjct: 329 FNAVPSIDFDTEDMPDIPAFEQNLPPAPPKVHFNS 363
>gi|418183969|ref|ZP_12820518.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47283]
gi|421216577|ref|ZP_15673480.1| DNA mismatch repair protein mutL domain protein [Streptococcus
pneumoniae 2070335]
gi|353852438|gb|EHE32426.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47283]
gi|395585615|gb|EJG45994.1| DNA mismatch repair protein mutL domain protein [Streptococcus
pneumoniae 2070335]
Length = 313
Score = 134 bits (338), Expect = 3e-28, Method: Composition-based stats.
Identities = 89/268 (33%), Positives = 144/268 (53%), Gaps = 10/268 (3%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GHGIAHDEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEVEE--VIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLI--SDGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYV 267
EISG++S P + + + + ++IN RY+
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI 259
>gi|260102902|ref|ZP_05753139.1| DNA mismatch repair protein HexB [Lactobacillus helveticus DSM
20075]
gi|260083291|gb|EEW67411.1| DNA mismatch repair protein HexB [Lactobacillus helveticus DSM
20075]
Length = 636
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 38/365 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ F+ G+ V+
Sbjct: 1 MAKIHELSENLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFIDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI+RD + L RH ATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRH-ATSKISNEHDL---FKVSTLGFRGEALASISAVSHVEIVTA 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
GSK G +D GT + RDLF+N P R KY++ SP+ + +
Sbjct: 115 TENAIGIKADFSGGSKK---GQEDAASQKGTKITVRDLFFNTPARLKYLR-SPRTEIMKI 170
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAND 236
+ R++L +P VSF + + ++L + + L +++ +G ++ A D
Sbjct: 171 VDIINRLSLGYPHVSFT---LSNTGKVLFRTTGNGNLKQTVANVYGRHIAEKMESFEAKD 227
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+I+G +S P + S + F + +N RY+ +++ NN +
Sbjct: 228 SDFKITGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQLNNAIM 268
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G SK A P ++ + L D+ P K V + + I AI A + K
Sbjct: 269 DGYGSKLAARHYPIVVIAIHVDPMLVDVNVHPTKQEVRLSKEKELSRLITGAISDALLDK 328
Query: 355 IAHDS 359
S
Sbjct: 329 TEQSS 333
>gi|255014822|ref|ZP_05286948.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_1_7]
gi|410102769|ref|ZP_11297694.1| DNA mismatch repair protein mutL [Parabacteroides sp. D25]
gi|409237896|gb|EKN30691.1| DNA mismatch repair protein mutL [Parabacteroides sp. D25]
Length = 615
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 179/370 (48%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+ + N + +G V+ VV+ELV N+VDAGA+ + V + ++V+DDG G
Sbjct: 5 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +D + T GFRGEALASI+ V+ +E+ T+A G
Sbjct: 65 MSETDARMAFERHA-TSKI---STAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGTE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + GS I+ E + G+ ++LF+N P RRK+++S+ + + + +
Sbjct: 121 LGTCLSIAGSNL--ESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINE-FE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+P+V ++E + S +I+ +G L ++A + IS
Sbjct: 178 RIALVNPQVGMSLYHNDAE---IFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A Q+ ++N RY+ HK + +A +
Sbjct: 235 GFVGRPDSAKKRGALQFFFVNGRYMKHPYFHKAI------------MQAYEQLIPAGD-- 280
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P Y + S D+ P KT + F++ +P+ + A R A K A + D
Sbjct: 281 ---MPNYFVYFTLDPSSIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDF 337
Query: 363 DMLEDAELPL 372
D+ + ++P+
Sbjct: 338 DVEDAIDIPV 347
>gi|374338958|ref|YP_005095678.1| DNA mismatch repair protein MutL [Streptococcus macedonicus ACA-DC
198]
gi|372285078|emb|CCF03412.1| DNA mismatch repair protein MutL [Streptococcus macedonicus ACA-DC
198]
Length = 647
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 172/356 (48%), Gaps = 43/356 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI++D + L RH ATSK+ + AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 61 GEGITQDDVALSLHRH-ATSKIKNQADL---FRIRTLGFRGEAIPSIASISHFTVKTATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G V KG + E+++ VGT ++ +LFYN P R KYM+S ++
Sbjct: 117 DENYGTLLVAKGGEI-------EKQEPISTPVGTKIMVENLFYNTPARLKYMKSLQSELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+V+F I+ + + T S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEVAFSLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
D E+SGYI P + + + + + IN RY+ ++ N
Sbjct: 226 NADLDFEVSGYIGLPELTRANRNYITILINGRYI-------------------KNFLLNR 266
Query: 294 GFLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
L G SK P +++++ L D+ P K V + +++ I AI
Sbjct: 267 AILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMSLISSAI 322
>gi|323691986|ref|ZP_08106234.1| DNA mismatch repair protein MutL [Clostridium symbiosum WAL-14673]
gi|323503909|gb|EGB19723.1| DNA mismatch repair protein MutL [Clostridium symbiosum WAL-14673]
Length = 684
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 178/372 (47%), Gaps = 35/372 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ VV+EL+ N+VDA +T V V + ++V D+
Sbjct: 1 MANIQVLDQNTINQIAAGEVIERPASVVKELLENAVDAKSTAVTVEIRDGGLSMIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI ++ + L RHA TSK+ ++D + + GFRGEAL+SI+ V+ +E+ITK
Sbjct: 61 GCGIPKEEIPLAFLRHA-TSKI---RTVEDLFTVASLGFRGEALSSIASVAQVELITKTT 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G R ++G + + L ++ GTT ++R+LFYN P RRK++++ + H V
Sbjct: 117 GSMSGSRYQIEGGEEIAL--EEVGAPEGTTFIARNLFYNTPARRKFLKTPMTEGAH-VAD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +IAL HP++S + I ++ L T + + ++ + FG E + L V + +
Sbjct: 174 LVEKIALSHPEISIRLI--QNGQSKLHTSGNHNLKDIIYTIFGREIAANLIAVQSGADPV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++ G+I P + + ++ +IN RY+ I+K + F +
Sbjct: 232 KVEGFIGKPLIARGNRNYENYFINGRYIKSSLINKAIEDAYKPFMMQHKY---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
P +L D+ P K + F+D E V + I A +K
Sbjct: 282 -------PFTMLQFTIEPEFLDVNVHPAKMELRFRDGEMVYRMVYHTISMALSQK----- 329
Query: 360 FDVDMLEDAELP 371
+++ ELP
Sbjct: 330 ---ELIPQVELP 338
Score = 43.9 bits (102), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 38/189 (20%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKS-------VAYLDAEQELVLPEIGYQLLQNFA 1238
L +IDQHAA E++ E+ + E S + L +EL +L+ +
Sbjct: 515 LYIIDQHAAHEKVLYEKTMASLKKREYTSQMINPPIILTLSGNEEL--------MLKKYM 566
Query: 1239 EQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLA 1298
E G+ I G + + + AVP NL + E L ++
Sbjct: 567 EHFTAVGF--EIEHFGGKEY--------------AVRAVPA----NLFSIAKKELLMEMI 606
Query: 1299 D--TDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1355
D TDG P ++ + S +C+ A+ ++ +E +++EL + + C HGRP
Sbjct: 607 DGLTDGVDQGTPDIINEKIASMSCKAAVKGNHAMSAAEADSLIDELLELENPYACPHGRP 666
Query: 1356 TTVPLVNLE 1364
T + + E
Sbjct: 667 TIITMSKYE 675
>gi|323486938|ref|ZP_08092253.1| DNA mismatch repair protein mutL [Clostridium symbiosum WAL-14163]
gi|323399710|gb|EGA92093.1| DNA mismatch repair protein mutL [Clostridium symbiosum WAL-14163]
Length = 684
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 178/372 (47%), Gaps = 35/372 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ VV+EL+ N+VDA +T V V + ++V D+
Sbjct: 1 MANIQVLDQNTINQIAAGEVIERPASVVKELLENAVDAKSTAVTVEIRDGGLSMIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI ++ + L RHA TSK+ ++D + + GFRGEAL+SI+ V+ +E+ITK
Sbjct: 61 GCGIPKEEIPLAFLRHA-TSKI---RTVEDLFTVASLGFRGEALSSIASVAQVELITKTT 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G R ++G + + L ++ GTT ++R+LFYN P RRK++++ + H V
Sbjct: 117 GSMSGSRYQIEGGEEIAL--EEVGAPEGTTFIARNLFYNTPARRKFLKTPMTEGAH-VAD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +IAL HP++S + I ++ L T + + ++ + FG E + L V + +
Sbjct: 174 LVEKIALSHPEISIRLI--QNGQSKLHTSGNHNLKDIIYTIFGREIAANLIAVQSGAEPV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++ G+I P + + ++ +IN RY+ I+K + F +
Sbjct: 232 KVEGFIGKPLIARGNRNYENYFINGRYIKSSLINKAIEDAYKPFMMQHKY---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
P +L D+ P K + F+D E V + I A +K
Sbjct: 282 -------PFTMLQFTIEPEFLDVNVHPAKMELRFRDGEMVYRMVYHTISMALSQK----- 329
Query: 360 FDVDMLEDAELP 371
+++ ELP
Sbjct: 330 ---ELIPQVELP 338
Score = 43.9 bits (102), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 38/189 (20%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKS-------VAYLDAEQELVLPEIGYQLLQNFA 1238
L +IDQHAA E++ E+ + E S + L +EL +L+ +
Sbjct: 515 LYIIDQHAAHEKVLYEKTMASLKKREYTSQMINPPIILTLSGNEEL--------MLKKYM 566
Query: 1239 EQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLA 1298
E G+ I G + + + AVP NL + E L ++
Sbjct: 567 EHFTAVGF--EIEHFGGKEY--------------AVRAVPA----NLFSIAKKELLMEMI 606
Query: 1299 D--TDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1355
D TDG P ++ + S +C+ A+ ++ +E +++EL + + C HGRP
Sbjct: 607 DGLTDGVDQGTPDIINEKIASMSCKAAVKGNHAMSAAEADSLIDELLELENPYACPHGRP 666
Query: 1356 TTVPLVNLE 1364
T + + E
Sbjct: 667 TIITMSKYE 675
>gi|301312041|ref|ZP_07217963.1| DNA mismatch repair protein MutL [Bacteroides sp. 20_3]
gi|423339404|ref|ZP_17317145.1| DNA mismatch repair protein mutL [Parabacteroides distasonis
CL09T03C24]
gi|300830143|gb|EFK60791.1| DNA mismatch repair protein MutL [Bacteroides sp. 20_3]
gi|409230785|gb|EKN23646.1| DNA mismatch repair protein mutL [Parabacteroides distasonis
CL09T03C24]
Length = 615
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 179/370 (48%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+ + N + +G V+ VV+ELV N+VDAGA+ + V + ++V+DDG G
Sbjct: 5 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +D + T GFRGEALASI+ V+ +E+ T+A G
Sbjct: 65 MSETDARMAFERHA-TSKI---STAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + GS I+ E + G+ ++LF+N P RRK+++S+ + + + +
Sbjct: 121 LGTCLSIAGSNL--ESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINE-FE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+P+V ++E + S +I+ +G L ++A + IS
Sbjct: 178 RIALVNPQVGMSLYHNDAE---IFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A Q+ ++N RY+ HK + +A +
Sbjct: 235 GFVGRPDSAKKRGALQFFFVNGRYMKHPYFHKAI------------MQAYEQLIPAGD-- 280
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P Y + S D+ P KT + F++ +P+ + A R A K A + D
Sbjct: 281 ---MPNYFVYFTLDPSSIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDF 337
Query: 363 DMLEDAELPL 372
D+ + ++P+
Sbjct: 338 DVEDAIDIPV 347
>gi|163787897|ref|ZP_02182343.1| DNA mismatch repair protein [Flavobacteriales bacterium ALC-1]
gi|159876217|gb|EDP70275.1| DNA mismatch repair protein [Flavobacteriales bacterium ALC-1]
Length = 616
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 173/350 (49%), Gaps = 36/350 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGAT++ + V+V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATEIKLIIKDAGKTLVQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK + +D + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSVTDARLSFERH-ATSK---IKSAEDLFQLNTKGFRGEALASIAAIAHVELKTKRPEDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G ++GS + + V GT+V ++LF+N P RR +++S ++ H +
Sbjct: 121 LGTAIEIEGST-----VKSQEVSVTPSGTSVAVKNLFFNIPARRNFLKSDTVELRH-ITD 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
R+AL HP ++F F S+ L +S + ++ FG + L V L
Sbjct: 175 EFHRVALAHPNIAFVFYHNGSD---LFNVTSENYRQRVVHIFGTKTNEKLVPVEEETEVL 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKG 298
+ISG++ P S K+ Q+ ++N R++ K P LNH + A+F+ G LK
Sbjct: 232 KISGFVGKPEFSKKTKSEQFFFVNQRFI-KSP---YLNHAINAAFE---------GLLKD 278
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P+Y LNL D+ P KT + F D + A + A++
Sbjct: 279 GYH-----PSYFLNLTVDPKTIDINIHPTKTEIKFDDEHTLYAILRSAVK 323
>gi|421894543|ref|ZP_16325031.1| DNA mismatch repair MutL family protein [Pediococcus pentosaceus
IE-3]
gi|385272633|emb|CCG90403.1| DNA mismatch repair MutL family protein [Pediococcus pentosaceus
IE-3]
Length = 645
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 202/425 (47%), Gaps = 50/425 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ L E + + + +G V+ VV+ELV N++DAG++++ + + ++++D+
Sbjct: 1 MAEIHELSEILADQIAAGEVVERPASVVKELVENAIDAGSSRIDILLEESGLKMIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEAL---ASISDVSLLEIIT 116
GSGI D + + +RHA TSK+ +D+ +GT GFRGEAL ASI+DV +L T
Sbjct: 61 GSGIDADQVEIAFKRHA-TSKISSRSDL---FKVGTLGFRGEALPSIASIADVEMLTATT 116
Query: 117 KAHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G+ YR G K G D + GT + RDLF+N P R KY++S + L
Sbjct: 117 DGPGKKIHYR----GGKLEDSG--DAQSRQGTDITVRDLFFNTPARLKYLKSLQTE-LSK 169
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V RIAL +P+V+ +E EL+ T + + +L + +G ++ + V +
Sbjct: 170 ITDIVNRIALSYPEVAISL--QNNERELMRTSGNGNIQQVLANIYGAKNAQKMVHVKEQN 227
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
I GYIS P + + +++ V +N RY+ I K + +G+
Sbjct: 228 IDFTIDGYISLPEFTRANRSYITVLVNGRYIKNFQISKAI---------------IDGY- 271
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
G + P +LN++ L D+ P K V + + +L I +A+ + K
Sbjct: 272 -GSKLMVGRYPVAVLNIKTDPILVDVNVHPTKQEVRISEEQTLLDLISKAVFNELADK-- 328
Query: 357 HDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQR-DHMFHKECERITFQEFQ 415
+++ DA L+ SR + + SS +LA+ F E + +T +
Sbjct: 329 ------NLIPDAVDNLKKSRVK-------VSSSEQLDLARMAISGSFGMEQDHVTIPDTD 375
Query: 416 KDPVE 420
D VE
Sbjct: 376 NDEVE 380
>gi|419481225|ref|ZP_14021021.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40563]
gi|379582632|gb|EHZ47510.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40563]
Length = 643
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 203/432 (46%), Gaps = 47/432 (10%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSGISR 65
+PE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+G GIS
Sbjct: 1 MPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGYGISH 60
Query: 66 DGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGY 125
D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G +G
Sbjct: 61 DEVELALRRHA-TSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGT 116
Query: 126 RKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIA 185
+ V +G + + VGT V DLF+N P R KYM+S ++ H + V R+
Sbjct: 117 KLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DIVNRLG 173
Query: 186 LVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYI 245
L HP++SF I E+ T + + +G+ + + +D EISG++
Sbjct: 174 LAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIAIENSDLDFEISGFV 231
Query: 246 SSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQA 305
S P + + + + ++IN RY+ ++ N L G SK
Sbjct: 232 SLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFGSKLMV 272
Query: 306 C--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 363
P ++++ L D+ P K V + ++ + AI ++ ++ + D
Sbjct: 273 GRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ----TLIPD 328
Query: 364 MLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQKDPVEL 421
LE+ L + R + T L PLK + +++++ E R + E VEL
Sbjct: 329 ALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVADYQVEL 378
Query: 422 AEENTEMEFFSQ 433
+E ++ F++
Sbjct: 379 TDEGQDLTLFAK 390
>gi|225567943|ref|ZP_03776968.1| hypothetical protein CLOHYLEM_04016 [Clostridium hylemonae DSM
15053]
gi|225163231|gb|EEG75850.1| hypothetical protein CLOHYLEM_04016 [Clostridium hylemonae DSM
15053]
Length = 695
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 167/348 (47%), Gaps = 27/348 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ VV+EL N++DAGAT + V + ++++ D+
Sbjct: 1 MNKIQVLDQVTIDKIAAGEVIERPASVVKELAENAIDAGATSITVEIKEGGISFIRIADN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI R+ + RH+ TSK+ + D+ IG+ GFRGEAL+SI+ VS +E++TK
Sbjct: 61 GCGIGREDVPSAFLRHS-TSKIRSVEDL---VHIGSLGFRGEALSSIAAVSQVELVTKTK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + G K L +D GTT + R LFYN P RRK++++ + H V +
Sbjct: 117 ADTFGTSYRIAGGKEEAL--EDTGAPDGTTFLIRQLFYNTPARRKFLKTPMTEASH-VGE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP++SF+FI+ + + T + S ++ +G E + L VN +
Sbjct: 174 LVTRLALSHPEISFQFIN--NGQSKVHTSGNGSLKDVIYHVYGREIAANLLAVNYERTGM 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+I+G++ P S + F+ +IN RYV I K + F +
Sbjct: 232 KITGFLGKPLISRGNRNFENYFINGRYVKSNMIAKAIEDAYKDFTMQHKY---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
P +L++ D+ P K + F + + V + A+
Sbjct: 282 -------PFVVLHMEIDGEHIDVNVHPTKMELRFNNQQDVYNSVYEAV 322
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 19/198 (9%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
K++ QV + V +L +IDQHAA ER+ E + + E S Y+ L L
Sbjct: 507 KLVGQVFDTYWIVEFHDSLYIIDQHAAHERVLYERTLKNMKTREFTS-QYISPPIILDLT 565
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLS 1286
+LL + EQ G+ I G S+ + AVP +F +
Sbjct: 566 MQEAELLTMYMEQFTKVGF--EIEEFGQDSY--------------AVRAVPDNLFSIAKK 609
Query: 1287 DVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
++ L+E + L+D + +P + + S +C+ A+ L +E ++ EL
Sbjct: 610 EL-LMEMIDSLSDEISRTLSPDLIDEKVASMSCKAAVKGNMKLSAAEVDTLINELLMLEN 668
Query: 1347 CFQCAHGRPTTVPLVNLE 1364
+ C HGRPT + + E
Sbjct: 669 PYHCPHGRPTIIAMTKRE 686
>gi|265767840|ref|ZP_06095372.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_1_16]
gi|336412089|ref|ZP_08592547.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_1_56FAA]
gi|375360130|ref|YP_005112902.1| putative DNA mismatch repair protein [Bacteroides fragilis 638R]
gi|383119907|ref|ZP_09940644.1| DNA mismatch repair protein mutL [Bacteroides sp. 3_2_5]
gi|423252202|ref|ZP_17233204.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL03T00C08]
gi|423252522|ref|ZP_17233453.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL03T12C07]
gi|423283062|ref|ZP_17261947.1| DNA mismatch repair protein mutL [Bacteroides fragilis HMW 615]
gi|251944073|gb|EES84592.1| DNA mismatch repair protein mutL [Bacteroides sp. 3_2_5]
gi|263252512|gb|EEZ24040.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_1_16]
gi|301164811|emb|CBW24371.1| putative DNA mismatch repair protein [Bacteroides fragilis 638R]
gi|335939261|gb|EGN01138.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_1_56FAA]
gi|392647814|gb|EIY41511.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL03T00C08]
gi|392660598|gb|EIY54207.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL03T12C07]
gi|404581336|gb|EKA86035.1| DNA mismatch repair protein mutL [Bacteroides fragilis HMW 615]
Length = 625
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 184/378 (48%), Gaps = 46/378 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKIIIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L C ++S FG + L V N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSELFNLPACHLRQ---RILSVFGKKLNQQLLSVEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 231 VKVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + +I+ + K
Sbjct: 274 -----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASIKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELP 371
A S D D + ++P
Sbjct: 329 FNAVPSIDFDTEDMPDIP 346
>gi|295088070|emb|CBK69593.1| DNA mismatch repair protein MutL [Bacteroides xylanisolvens XB1A]
Length = 633
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 186/395 (47%), Gaps = 46/395 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIRQAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + V+ GS+ + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKLVIAGSQV------ESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L S +++ FG + L + N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 231 VKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------------------- 268
Query: 299 KRSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ Q P +Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 269 MEAYEQLIPTGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS 388
A S D D + ++P + S H ++
Sbjct: 329 FSAIPSIDFDTEDMPDIPAFEEKMSSEPPKIHYNT 363
>gi|150008991|ref|YP_001303734.1| DNA mismatch repair protein mutL [Parabacteroides distasonis ATCC
8503]
gi|298375777|ref|ZP_06985733.1| DNA mismatch repair protein MutL [Bacteroides sp. 3_1_19]
gi|423330264|ref|ZP_17308048.1| DNA mismatch repair protein mutL [Parabacteroides distasonis
CL03T12C09]
gi|167017344|sp|A6LEJ8.1|MUTL_PARD8 RecName: Full=DNA mismatch repair protein MutL
gi|149937415|gb|ABR44112.1| DNA mismatch repair protein mutL [Parabacteroides distasonis ATCC
8503]
gi|298266814|gb|EFI08471.1| DNA mismatch repair protein MutL [Bacteroides sp. 3_1_19]
gi|409231880|gb|EKN24728.1| DNA mismatch repair protein mutL [Parabacteroides distasonis
CL03T12C09]
Length = 615
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 179/370 (48%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+ + N + +G V+ VV+ELV N+VDAGA+ + V + ++V+DDG G
Sbjct: 5 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +D + T GFRGEALASI+ V+ +E+ T+A G
Sbjct: 65 MSETDARMAFERHA-TSKI---STAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGTE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + GS I+ E + G+ ++LF+N P RRK+++S+ + + + +
Sbjct: 121 LGTCLSIAGSNL--ESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINE-FE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+P+V ++E + S +I+ +G L ++A + IS
Sbjct: 178 RIALVNPQVGMSLYHNDAE---IFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A Q+ ++N RY+ HK + +A +
Sbjct: 235 GFVGRPDSAKKRGALQFFFVNGRYMKHPYFHKAI------------MQAYEQLIPAGD-- 280
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P Y + S D+ P KT + F++ +P+ + A R A K A + D
Sbjct: 281 ---MPNYFVYFTLDPSSIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDF 337
Query: 363 DMLEDAELPL 372
D+ + ++P+
Sbjct: 338 DVEDAIDIPV 347
>gi|424665163|ref|ZP_18102199.1| DNA mismatch repair protein mutL [Bacteroides fragilis HMW 616]
gi|404575027|gb|EKA79772.1| DNA mismatch repair protein mutL [Bacteroides fragilis HMW 616]
Length = 626
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 186/395 (47%), Gaps = 46/395 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRIIIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L C ++S FG + L V N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSELFNLPACHLRQ---RILSIFGKKLNQQLLSVEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 231 VKVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + +++ + K
Sbjct: 274 -----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEHAIWQILSASVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS 388
A S D D + ++P H +S
Sbjct: 329 FNAVPSIDFDTEDMPDIPAFEQNLPPEPPKVHFNS 363
>gi|423211959|ref|ZP_17198488.1| DNA mismatch repair protein mutL [Bacteroides xylanisolvens
CL03T12C04]
gi|392695323|gb|EIY88546.1| DNA mismatch repair protein mutL [Bacteroides xylanisolvens
CL03T12C04]
Length = 631
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 189/401 (47%), Gaps = 48/401 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIRQAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + V+ GS+ + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKLVIAGSQV------ESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L S +++ FG + L + N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 231 VKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------------------- 268
Query: 299 KRSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ Q P +Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 269 MEAYEQLIPTGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS--SPLK 392
A S D D + ++P + S H ++ +P K
Sbjct: 329 FSAIPSIDFDTEDMPDIPAFEEKISSEPPKIHYNTDYNPFK 369
>gi|325281465|ref|YP_004254007.1| DNA mismatch repair protein mutL [Odoribacter splanchnicus DSM
20712]
gi|324313274|gb|ADY33827.1| DNA mismatch repair protein mutL [Odoribacter splanchnicus DSM
20712]
Length = 617
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 173/375 (46%), Gaps = 36/375 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M ++ LP++V N + +G V+ VV+EL+ N++DAGA + V + V ++V+DD
Sbjct: 1 MDIVHLLPDSVANQIAAGEVVQRPASVVKELMENAIDAGAKHIQVVLKNVGKAIIQVIDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + ERH ATSK +A D I T GFRGEAL SI+ VS +E+ T+
Sbjct: 61 GKGMSNMDARMAFERH-ATSK---IASAQDLFSINTLGFRGEALPSIASVSEVELKTRQE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
G + S+ ++ V GT + R+LFYN P RRK+++S + L
Sbjct: 117 EDELGTSIFIAASEL------KNQESVSCPKGTNISVRNLFYNIPARRKFLKSDTTE-LR 169
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
++ LR+AL +P++SF + + ++ S S +++ FG S L ++
Sbjct: 170 NITNEFLRVALTNPEISFC---LSNNGNVIYNLSPSGLRQRIVNIFGKSINSRLINIDCA 226
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
G ++I G+I SP + QY ++N+R++ HK + + D
Sbjct: 227 TGLVDIKGFICSPEQARKTYGEQYFFVNNRFMKHPFFHKAVTEAYSGLIGVD-------- 278
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
P+Y + SL D+ P KT + F++ + I+ A K
Sbjct: 279 ---------CIPSYFIYFTVDPSLIDINIHPTKTEIKFQNETDFFQILLAGIKEALGKFN 329
Query: 356 AHDSFDVDMLEDAEL 370
D D EL
Sbjct: 330 ITPPLDFDTAGSIEL 344
>gi|295692268|ref|YP_003600878.1| DNA mismatch repair protein mutl [Lactobacillus crispatus ST1]
gi|295030374|emb|CBL49853.1| DNA mismatch repair protein mutL [Lactobacillus crispatus ST1]
Length = 641
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 177/364 (48%), Gaps = 36/364 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MSKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI+RD + L RH ATSK +A+ D + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRH-ATSK---IANEHDLFKVSTLGFRGEALASISAVSHVEILT- 113
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
A G R G G +D GT + +DLF+N P R KY++ SP+ + +
Sbjct: 114 ATENAIGIRANYSGGNK--KGQEDAAARKGTKITVKDLFFNTPARLKYLR-SPRTEIMKI 170
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R+AL +P VSF + + LL T +++ + + +G +++ A D
Sbjct: 171 VDIINRLALGYPHVSFTLSN--TGKILLRTPGNNNLKQTVANVYGRHIAEKMEKFEAKDS 228
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+I+G +S P + S + F + +N RY+ +++ N L
Sbjct: 229 DFKITGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQLNTAILD 269
Query: 298 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
G SK A P +L ++ L D+ P K V + + I AI + ++K+
Sbjct: 270 GYGSKLAARHYPIIVLAIKVDPLLVDVNVHPTKQEVRLSKEKELGRLITSAISNTLVEKV 329
Query: 356 AHDS 359
S
Sbjct: 330 EQIS 333
>gi|225012742|ref|ZP_03703177.1| DNA mismatch repair protein MutL [Flavobacteria bacterium MS024-2A]
gi|225003275|gb|EEG41250.1| DNA mismatch repair protein MutL [Flavobacteria bacterium MS024-2A]
Length = 593
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 186/370 (50%), Gaps = 30/370 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP+ V N + +G V+ VV+EL+ N+VDAG+ + + V V+V+D+G+G
Sbjct: 5 ISLLPDHVANQIAAGEVIQRPASVVKELLENAVDAGSDTIQLIVKDAGKTLVQVIDNGTG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ + L ERH ATSK+ +D + T GFRGEALASI+ ++ +E T+
Sbjct: 65 MNSTDIRLAFERH-ATSKIN---IAEDLFTLKTKGFRGEALASIAAIAHVETHTRVENED 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+ ++GS+ + + + K GT++ + LFYN P RR +++S ++ H + +
Sbjct: 121 VSHCLKIEGSQVIEQTLSTQPK--GTSIAVKSLFYNIPARRNFLKSDTVELRHVIDE-FH 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP++ F F + SE L SS+ L++ FG + S L + ++
Sbjct: 178 RVALAHPEIKFLFFNNGSE---LFDLPSSNLRKRLVAIFGNKLDSLLVPIEETTSLARLN 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKRS 301
G++ P + + Q+ ++N+R++ + P LNH ++A+F+ G L+ +
Sbjct: 235 GFVVKPSHAKKTRGQQFFFVNNRFI-RSP---FLNHAVSAAFE---------GLLRPGFN 281
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFD 361
P Y L L D+ P KT V F+D + + A + I+ + + D
Sbjct: 282 -----PGYFLFLELDPKTIDINIHPTKTEVKFEDEQSLYAILRSTIKHSLGIFQVIPTLD 336
Query: 362 VDMLEDAELP 371
+ + E+P
Sbjct: 337 FEQNQTMEVP 346
>gi|423261250|ref|ZP_17242151.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL07T00C01]
gi|423267775|ref|ZP_17246755.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL07T12C05]
gi|387774402|gb|EIK36514.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL07T00C01]
gi|392696034|gb|EIY89236.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL07T12C05]
Length = 625
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 184/378 (48%), Gaps = 46/378 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKIIIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L C ++S FG + L V N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSELFNLPACHLRQ---RILSVFGKKLNQQLLSVEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 231 VKVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + +I+ + K
Sbjct: 274 -----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASIKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELP 371
A S D D + ++P
Sbjct: 329 FNAVPSIDFDTEDMPDIP 346
>gi|336403765|ref|ZP_08584474.1| DNA mismatch repair protein mutL [Bacteroides sp. 1_1_30]
gi|335945119|gb|EGN06935.1| DNA mismatch repair protein mutL [Bacteroides sp. 1_1_30]
Length = 633
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 186/395 (47%), Gaps = 46/395 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIRQAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + V+ GS+ + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKLVIAGSQV------ESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L S +++ FG + L + N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 231 VKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------------------- 268
Query: 299 KRSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ Q P +Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 269 MEAYEQLIPTGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS 388
A S D D + ++P + S H ++
Sbjct: 329 FSAIPSIDFDTEDMPDIPAFEEKISSEPPKIHYNT 363
>gi|289424087|ref|ZP_06425873.1| DNA mismatch repair protein MutL [Peptostreptococcus anaerobius
653-L]
gi|289155512|gb|EFD04191.1| DNA mismatch repair protein MutL [Peptostreptococcus anaerobius
653-L]
Length = 627
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 176/356 (49%), Gaps = 31/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC---YVKVV 57
M IN L ++ N + +G V+ + +++ELV NS+DAG++ ++ + + N +++V
Sbjct: 1 MAKINILDDSTINKIAAGEVVERPSSIIKELVENSIDAGSS--YISIEIENGGKDLIRIV 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+GSGI +D + RHA TSK+ + D+ + + + GFRGEALASIS VS LE++TK
Sbjct: 59 DNGSGIDKDDVNKAFLRHA-TSKINTVEDL---SSLESLGFRGEALASISAVSKLEMLTK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G R V+ G K + GT + RDLF+N P RRK+++S+ + ++
Sbjct: 115 TEEALIGLRIVLDGGKIREKEATSANR--GTQISVRDLFFNTPARRKFLKSNQAEA-QAI 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
V +IA+ +P + K+I+ + + T S + + +G + L E++
Sbjct: 172 TDIVNKIAIGNPSIKIKYIN--NSKTIYETLGDGSIINAIRMIYGRDISENLIEIDYRSK 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
ISGY+ + + Q++YIN RY+ I K +N D++KA K
Sbjct: 230 YFSISGYLGNNNIYRGNRNHQHLYINGRYIKSPNISKKIN---------DAYKAIIPINK 280
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
P Y +N+ + D+ P K V F E +L + +R +K
Sbjct: 281 --------YPIYFVNISVDPAKVDVNIHPSKLEVKFDQEEEILNELSDFVRGILLK 328
Score = 45.1 bits (105), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 34/186 (18%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIK--- 1242
+ ++DQHAA ERIR E K + D ++++ I L N + ++
Sbjct: 460 MIMLDQHAAHERIRFEMYMSKYKAN--------DISVQMLIDPIIMDLDANDMDTVRKNI 511
Query: 1243 ----DWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLA 1298
+G++ + G RS I++ +P FG S + E + L
Sbjct: 512 DVFSSFGFL--VEEFGHRS--------------ISIRGLPNTFGEPESKRFIYELIDGLG 555
Query: 1299 DTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1358
D T + + AC+ AI D + E ++ +L++ S + C HGRPT V
Sbjct: 556 KIDNIYDTKYDEIAEI---ACKSAIKGNDKISIEEAKHLIGQLEECSNPYTCPHGRPTMV 612
Query: 1359 PLVNLE 1364
+ E
Sbjct: 613 KMTRYE 618
>gi|440750146|ref|ZP_20929390.1| DNA mismatch repair protein MutL [Mariniradius saccharolyticus AK6]
gi|436481187|gb|ELP37368.1| DNA mismatch repair protein MutL [Mariniradius saccharolyticus AK6]
Length = 624
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 173/353 (49%), Gaps = 38/353 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+A+ N + +G V+ ++E++ N+VDAGAT++ V V ++++D+G+G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASALKEMLENAVDAGATQIQVIVKEAGKTLIQIIDNGNG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ +D I TFGFRGEALASI+ V+ LE+ T+
Sbjct: 65 MSMTDARMCFERHA-TSKI---RTTEDLFAIRTFGFRGEALASIAAVAQLEMKTRQASSE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G ++GS+ ++++ +GT+++ ++LF+N P RR +++S+P ++ H V
Sbjct: 121 LGTLIQIEGSEV-------KKQEPVSCPIGTSILVKNLFFNVPARRNFLKSNPVEMRHIV 173
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
++ R+AL +P++ F + E L S ++ FG L
Sbjct: 174 EE-FQRVALAYPEIGFSLYQNDLELFKLVPGKLSQR---IVGIFGKSYQGQLVACREETP 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
L I GYI P S + Q+ ++N+R++ +H H A+ A G +
Sbjct: 230 HLNIHGYIGKPEASKKTRGEQFFFVNNRFIKNNYLH----HAVAN--------AYEGLMG 277
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P Y+L L S D+ P KT + F D V A I A++ A
Sbjct: 278 ADMQ-----PFYVLFLDIDPSHIDINVHPTKTEIKFDDERTVYAVIRSAVKQA 325
>gi|154483534|ref|ZP_02025982.1| hypothetical protein EUBVEN_01238 [Eubacterium ventriosum ATCC
27560]
gi|149735444|gb|EDM51330.1| DNA mismatch repair domain protein [Eubacterium ventriosum ATCC
27560]
Length = 687
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 180/355 (50%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ +V+EL+ N++DAGAT + V + +++ D+
Sbjct: 1 MSKIHVLDQNTINQIAAGEVIDRPASIVKELMENAIDAGATMISVEIKDGGTSLIRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI +D + + RHA TSK+ D+ + + GFRGEAL+SI+ V +E+ITK
Sbjct: 61 GSGIEKDDIKVAFLRHA-TSKIKTALDL---ISVSSLGFRGEALSSIASVCQVELITKTE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R ++G K + ++ GTT + +++F+N P RRK+++++ + + + +
Sbjct: 117 DAITGIRYKIEGGKEVTF--EEIGAPEGTTFIVKNIFFNTPARRKFLKTAQTEAGY-ISE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +IAL HP++S FI+ + + T + + ++ + +G + + L E+N ++ +
Sbjct: 174 IVEKIALSHPEISISFIN--NNQTKIHTSGNGNLKDVIYNIYGRDIANNLLEINCSNEFI 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+++GYI S ++F+ +IN RY+ I K + D +K F+ +
Sbjct: 232 KMTGYIGKAIISKGNRSFENYFINGRYIKNNIISKAI---------EDGYK----FILMQ 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P +N L D+ P K + F+ E + FI +I ++K
Sbjct: 279 ----HKYPFTAINFEIDQDLLDVNVHPAKMELRFRKGEAIYPFIMDSIHDTLVEK 329
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 20/198 (10%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
+++ QV + + V G + +IDQHAA E++ E+L + LS + S ++ L L
Sbjct: 500 RLVGQVFETYWIVEYDGKMYIIDQHAAHEKVMFEKLMDR-LSKKEVSSQMINPPIILNLS 558
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLS 1286
L+ + + K+ G+ I G + F + AVP ++ ++
Sbjct: 559 LNEANLINKYMDNFKEIGF--EIEAFGGQDF--------------AVRAVPADLYTLDSY 602
Query: 1287 DVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
DV L++ + L++ +G P + + S +C+ A+ + + E ++++L
Sbjct: 603 DV-LMQIIDNLSNENGR-MVPDMITEKIASMSCKAAVKGNNKMSTQEANALIDQLLSLEN 660
Query: 1347 CFQCAHGRPTTVPLVNLE 1364
+ C HGRPT + + + E
Sbjct: 661 PYNCPHGRPTIISMSHYE 678
>gi|53715353|ref|YP_101345.1| DNA mismatch repair protein MutL [Bacteroides fragilis YCH46]
gi|60683322|ref|YP_213466.1| DNA mismatch repair protein [Bacteroides fragilis NCTC 9343]
gi|81313626|sp|Q5L8M5.1|MUTL_BACFN RecName: Full=DNA mismatch repair protein MutL
gi|81824910|sp|Q64NX1.1|MUTL_BACFR RecName: Full=DNA mismatch repair protein MutL
gi|52218218|dbj|BAD50811.1| DNA mismatch repair protein MutL [Bacteroides fragilis YCH46]
gi|60494756|emb|CAH09562.1| putative DNA mismatch repair protein [Bacteroides fragilis NCTC
9343]
Length = 625
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 184/378 (48%), Gaps = 46/378 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKIIIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L C ++S FG + L V N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSELFNLPACHLRQ---RILSVFGKKLNQQLLSVEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 231 VKVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + +I+ + K
Sbjct: 274 -----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASIKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELP 371
A S D D + ++P
Sbjct: 329 FNAVPSIDFDTEDMPDIP 346
>gi|386743737|ref|YP_006216916.1| methyl-directed mismatch repair protein [Providencia stuartii MRSN
2154]
gi|384480430|gb|AFH94225.1| methyl-directed mismatch repair protein [Providencia stuartii MRSN
2154]
Length = 651
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 179/368 (48%), Gaps = 34/368 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDDGSG 62
I L + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQILSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGEKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
IS+D LVL RHA TSK+ A +DD I + GFRGEALASIS VS L + +K +
Sbjct: 63 ISKDELVLALARHA-TSKI---ATLDDLEAIMSMGFRGEALASISSVSRLTLTSKPAEQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + GTTV DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTVKPAAHPNGTTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLA----LLISSFGIEDFSFLDEVNANDGA 238
RIAL P V+ I++ +L+ ++ A L + G ++ G
Sbjct: 177 RIALSRPDVT---INLNHNGKLVKQYRAAKGEAQQERRLANICGTGFMQGALAISWEHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G++ SP S V QY Y+N R + +L+NH +A G L
Sbjct: 234 LGIKGWVVSP-SSTPVSDIQYCYVNGRMMRD----RLINHAIR--------QAYEGHLDD 280
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
+ PAY+L L D+ P K V F V FI + +R+A + AH+
Sbjct: 281 NQQ-----PAYVLYLTIDPQQVDVNVHPAKHEVRFHQARLVHDFIYQGVRTALLN--AHE 333
Query: 359 SFDVDMLE 366
++ +E
Sbjct: 334 PDELPGIE 341
>gi|188026361|ref|ZP_02961804.2| hypothetical protein PROSTU_03873 [Providencia stuartii ATCC 25827]
gi|188020101|gb|EDU58141.1| DNA mismatch repair domain protein [Providencia stuartii ATCC
25827]
Length = 653
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 172/370 (46%), Gaps = 54/370 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDDGSG 62
I L + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 5 IQILSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGEKLIRIRDNGSG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
IS+D LVL RHA TSK+ A +DD I + GFRGEALASIS VS L + +K +
Sbjct: 65 ISKDELVLALARHA-TSKI---ATLDDLEAIMSMGFRGEALASISSVSRLTLTSKPAEQS 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + GTTV DLFYN P RRK+M++ + H + + V
Sbjct: 121 EAWQAYAEG-RDMAVTVKPAAHPNGTTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 178
Query: 183 RIALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL P V+ K + + + E L C + L S+
Sbjct: 179 RIALSRPDVTINLNHNGKLVKQYRAAKGEAQQERRLANICGTGFMQGALAMSW------- 231
Query: 229 LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 288
G L I G++ SP S V QY Y+N R + +L+NH
Sbjct: 232 ------EHGDLGIKGWVVSP-SSTPVSDIQYCYVNGRMMRD----RLINHAIR------- 273
Query: 289 WKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+A G L + PAY+L L D+ P K V F V FI + +R
Sbjct: 274 -QAYEGHLDDNQQ-----PAYVLYLTIDPQQVDVNVHPAKHEVRFHQARLVHDFIYQGVR 327
Query: 349 SAWMKKIAHD 358
+A + AH+
Sbjct: 328 TALLN--AHE 335
>gi|298207994|ref|YP_003716173.1| DNA mismatch repair protein [Croceibacter atlanticus HTCC2559]
gi|83850635|gb|EAP88503.1| putative DNA mismatch repair protein [Croceibacter atlanticus
HTCC2559]
Length = 617
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 180/369 (48%), Gaps = 28/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAG+ + + V ++V+DDG G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENALDAGSESIQLIVKEAGKILIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D I T GFRGEALASI+ VS +E+ TK
Sbjct: 65 MSVTDARLSFERHA-TSKI---KSAEDLFAINTKGFRGEALASIAAVSHVEMKTKQTQDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++GS+ + K GT++ ++LFYN P RR +++S ++ H + +
Sbjct: 121 VGTYIKIEGSEITTQDVCVTPK--GTSISVKNLFYNIPARRNFLKSDAVEMRHIIDEF-Q 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP V+F D+ L + SS+ +++ G + L V ++IS
Sbjct: 178 RVALAHPSVAF---DLHHNGSSLFSLPSSNYRQRIVNILGTKTNERLVPVEEETDIVKIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + + Q+ ++N+RY+ +H + + ++F+ G L+ K
Sbjct: 235 GFVGKPEFAKRTRGEQFFFVNNRYIKSSYLH---HSIVSAFE---------GLLRDK--- 279
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
+ P+Y L L D+ P KT + F+D + A ++ ++ + + D
Sbjct: 280 --SHPSYFLYLDVDPKTIDINIHPTKTEIKFEDEHTLYAMLKSVVKHSLGQFSVAPVLDF 337
Query: 363 DMLEDAELP 371
D D + P
Sbjct: 338 DRDSDLDTP 346
>gi|448726241|ref|ZP_21708651.1| DNA mismatch repair protein MutL [Halococcus morrhuae DSM 1307]
gi|445795859|gb|EMA46379.1| DNA mismatch repair protein MutL [Halococcus morrhuae DSM 1307]
Length = 728
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 167/360 (46%), Gaps = 36/360 (10%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDG 60
G I+RL ++ + +G V+ VV+ELV NS+DAGA++V + V V+V DDG
Sbjct: 46 GEIHRLDQSTIERIAAGEVVERPASVVKELVENSLDAGASRVRIAVERGGKDGVRVTDDG 105
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
+G+S + E+H TSK+G + D++ G+ + GFRGEALA+I VS L I TKA
Sbjct: 106 TGMSESAVETAVEKHT-TSKIGDIEDLE--AGVESLGFRGEALAAIGAVSRLTIRTKASE 162
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
G M G + I+ VGTTV DLFYN P RRKY++ + H V +
Sbjct: 163 ADRGTELTMVGGEI--ESIEPAGCPVGTTVEIDDLFYNVPARRKYLKQDQTEFGH-VSRV 219
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSF-------LDEVN 233
AL +P S +S E+ T S + +++ +G E LDE
Sbjct: 220 ATGYALSNPDRSLTLSHDDS--EVFSTTGQGSLESTVLAVYGREVAEAMIPLAGDLDEEG 277
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
DG I G +S P + + V++N RYV G + + KA
Sbjct: 278 PLDG---IDGVVSHPETTRASTQQCTVFVNGRYVRAGAVRDAI------------VKAYG 322
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
G L R P ++ L P + D+ P K + F D E V +E + +A ++
Sbjct: 323 GQLATDR-----YPFAVVFLSVPPNTVDVNVHPRKQEIRFADEETVREQVETTVENALLE 377
>gi|333029336|ref|ZP_08457397.1| DNA mismatch repair protein mutL [Bacteroides coprosuis DSM 18011]
gi|332739933|gb|EGJ70415.1| DNA mismatch repair protein mutL [Bacteroides coprosuis DSM 18011]
Length = 627
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 176/368 (47%), Gaps = 32/368 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DAGA + + + ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGAKNIQIIINDAGKTCMQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ D+ + T GFRGEALASI+ V+ +E++TK
Sbjct: 65 MSEIDARLAFERHA-TSKINKATDL---FALRTMGFRGEALASIAAVAQVELLTKTDNEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G R + GSK Y G + + G+ + ++LFYN P RR+++++ + L +
Sbjct: 121 LGTRVFISGSK--YEGQEAVATNTGSHFIIKNLFYNIPARRRFLKTDATE-LSKILNEFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+P+VSF E+E L + +I FG + L V+ + ++IS
Sbjct: 178 RIALVNPEVSFSLFSNETE---LFNLPETQIRQRIIHLFGKKLNQELLSVDVDTTLIKIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHK-LLNHLAASFDCSDSWKANNGFLKGKRS 301
GY++ P S A Q+ ++N RY+ +K ++ D
Sbjct: 235 GYVAKPEASRKRGAHQFFFVNGRYMHHPYFYKAVMEAYEELIPVGDQI------------ 282
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK--KIAHDS 359
+Y L + D+ P KT + F++ + + I ++ K ++
Sbjct: 283 ------SYFLYFDVDPATIDVNIHPTKTEIKFENEQAIWQIIAAGVKETLGKFNEVPSID 336
Query: 360 FDVDMLED 367
FD + + D
Sbjct: 337 FDTEGMPD 344
>gi|91794555|ref|YP_564206.1| DNA mismatch repair protein [Shewanella denitrificans OS217]
gi|123165778|sp|Q12J93.1|MUTL_SHEDO RecName: Full=DNA mismatch repair protein MutL
gi|91716557|gb|ABE56483.1| DNA mismatch repair protein MutL [Shewanella denitrificans OS217]
Length = 665
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 173/363 (47%), Gaps = 55/363 (15%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I+ LP + N + +G V+ VV+ELV NS+DAGAT+V + + +++ D+GSG
Sbjct: 3 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIDKGGSKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ L DD I +FGFRGEALASIS V+ L + +K +
Sbjct: 63 IPKDELALALSRHA-TSKVHSL---DDLEAILSFGFRGEALASISSVARLTLTSKTAEQT 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +GS+ + + + G+T+ DLF+N P RR++++S + H + + +
Sbjct: 119 EAWQAHAEGSQ-MDVSLMPAAHPQGSTIEVVDLFFNTPARRRFLKSDKTEFTH-IDEWLK 176
Query: 183 RIALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIA+V + F D++ + L C +F + +
Sbjct: 177 RIAIVRTDIHFSLTHNGKLVRQYRAANTDIQMQQRLSQICG---------RAFAEQAITL 227
Query: 229 LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 288
E +DG L + GYI SP+D+ SV Y Y+N R V KL+NH
Sbjct: 228 ACE---HDG-LSLEGYIQSPHDN-SVTDTNYFYVNGRLVRD----KLVNHAVRQAFAEHQ 278
Query: 289 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
W P+Y+L L PH + D+ P K V F V FI +A+
Sbjct: 279 WHQQ--------------PSYVLKLTLDPHQV-DVNVHPAKHEVRFHQSRYVHDFILQAL 323
Query: 348 RSA 350
+SA
Sbjct: 324 QSA 326
>gi|420155666|ref|ZP_14662524.1| DNA mismatch repair protein MutL [Clostridium sp. MSTE9]
gi|394758895|gb|EJF41731.1| DNA mismatch repair protein MutL [Clostridium sp. MSTE9]
Length = 687
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 174/354 (49%), Gaps = 27/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG IN L + V + +G V+ V++ELV NS+DAGAT + V + ++V D+
Sbjct: 1 MGKINLLDKHVAELIAAGEVVERPASVIKELVENSIDAGATSISVEIQNGGALLMRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI+R+ + RHA TSK+ H D++ IGT GFRGEALAS++ V+ ++++T+
Sbjct: 61 GSGIAREDVPTAFLRHA-TSKVLHAEDLES---IGTLGFRGEALASVAAVARVDLLTRIE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G V++G + L +D GT + RD+F+N P R K+++ + ++V
Sbjct: 117 EELAGTHYVIEGGEEQAL--EDAGCARGTVITVRDIFFNTPARMKFLKKDTVEA-NAVAA 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ +IAL HP+++ +F+ E L + + + FG E + L V +
Sbjct: 174 VMDKIALSHPELAVRFV--RDGKETLRAPGDGQLKSAVFAVFGREFTAGLIPVEYELQGV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++G++S P + ++ Q +IN R + A ++K + + GK
Sbjct: 232 RVTGFVSKPSHARPNRSMQQFFINGRTI---------RSRTAQVALEQAFKGS--LMVGK 280
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
PA +L+L P D+ P K V F + PV + +++A K
Sbjct: 281 ------FPACVLHLEIPVQAVDVNVHPGKLEVRFINERPVFDAVYYGVKTALSK 328
>gi|347531826|ref|YP_004838589.1| DNA mismatch repair protein MutL [Roseburia hominis A2-183]
gi|345501974|gb|AEN96657.1| DNA mismatch repair protein MutL [Roseburia hominis A2-183]
Length = 706
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 190/401 (47%), Gaps = 33/401 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
M I L + + + +G V+ + VV+ELV N++DA AT V V + +V++ D+
Sbjct: 1 MPQITLLSQETIDKIAAGEVVERPSSVVKELVENAIDARATAVTVEIKEGGTTFVRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI R+ + L RH+ TSK+ + D+ I + GFRGEAL+SI+ VS +E+ITK +
Sbjct: 61 GCGIEREQVPLAFLRHS-TSKIKSVEDL---LCIHSLGFRGEALSSIAAVSQVELITKTY 116
Query: 120 GRPNGYRKVMKGSKCLY---LGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G R V++GS+ + +G D GTT + R+LFYN P R+K+++++ + +
Sbjct: 117 SDLTGTRYVIEGSREMSNDEIGAPD-----GTTFIVRNLFYNTPARKKFLKTAQTEG-NY 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R+AL HP VSFKFI + + T +S+ L+ +G + + L V A
Sbjct: 171 ISDLIERLALSHPDVSFKFIS--NGQTKMHTSGNSNEKDLIYHIYGRDITAALLPVCAET 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ G++ P S ++++ +IN RY+ + K + +A GF+
Sbjct: 229 EYFSVKGFVGKPMISRGNRSYESYFINGRYIKSALLSKAVE------------EAYKGFM 276
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
P +L L D+ P K + F + E V + + IR K
Sbjct: 277 -----MQHQYPFCVLYFTMDTELLDVNVHPTKMELRFSNNEEVYRKLYQTIRDVLTHKEF 331
Query: 357 HDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQ 397
+ V+ ++ + P + + LH P + Q
Sbjct: 332 IPAVPVEEKKEEKRPAITGSLPEPFETKRLHIPPQTQVLPQ 372
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 49/252 (19%)
Query: 1121 HPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPV 1180
+PQ T + + ++ Q + +G FF PD+ + +++ +V + +
Sbjct: 487 NPQETADTV---VYEQQTLEAADTG-------FFTPDAARRH-----RIIGEVFDTYWLI 531
Query: 1181 VAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS-------VAYLDAEQELVLPEIGYQL 1233
L +IDQHAA E++ E +V + S + L AE++ ++
Sbjct: 532 EYEDKLFIIDQHAAHEKVLYERTMARVRTQNFASQTLSPPIILTLSAEEQ--------EM 583
Query: 1234 LQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF-GVNLSDVDLLE 1292
L + EQI+ +G+ + G + F + A+P F V++ + L+
Sbjct: 584 LTRYGEQIRLFGY--EVEPFGGKEF--------------AITAIPADFEAVDMKGM-FLD 626
Query: 1293 FLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAH 1352
L + G P +L + S +C+ AI GDS+ +E +++EL + C H
Sbjct: 627 MLDDFTNISGREA-PELILEKVASMSCKAAIKGGDSISRAEAEQLIDELLSLENPYHCPH 685
Query: 1353 GRPTTVPLVNLE 1364
GRPT + + E
Sbjct: 686 GRPTIISMSKYE 697
>gi|296132999|ref|YP_003640246.1| DNA mismatch repair protein MutL [Thermincola potens JR]
gi|296031577|gb|ADG82345.1| DNA mismatch repair protein MutL [Thermincola potens JR]
Length = 627
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 171/355 (48%), Gaps = 33/355 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L + N + +G V+ V++ELV N++DAG++K+ + + + V+D+
Sbjct: 1 MGKIKILDDFTANKIAAGEVVERPASVIKELVENALDAGSSKIEIQISRGGLDKITVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R+ L RHA TSK+ + AD+D I T GFRGEAL SI+ VS +E+ T+ H
Sbjct: 61 GEGMDREDARLAFHRHA-TSKIRNDADLD---AIATLGFRGEALPSIAAVSTVEVRTRPH 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD--VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G R +++G K + DE GTT+ +LF N P R K ++S + H +
Sbjct: 117 NEVCGARLIVEGGKI----VKDEDIGCPAGTTITVSNLFANVPARLKNIKSVSLEAGH-I 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAND 236
V ++A+ +P+VSF ++ ++ L S + + +I+S +G E L +NA
Sbjct: 172 SDVVSKLAVAYPEVSFS---LQHDNRFLFKTSGNGDMLDIIASLYGTETARALLPINAER 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ I+GYI+ P + S + Q +N R V P+ + L S + +
Sbjct: 229 DGIGINGYIARPSVTRSTRNHQTFIVNRRIVKSRPLSQALEQGYHSLIMTGRY------- 281
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P LN+ P++L D P K V + + + A++ A
Sbjct: 282 ----------PVAFLNIHLPYNLIDPNVHPAKMEVRLFVLDKISDLLSSAVKVAL 326
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 83/206 (40%), Gaps = 26/206 (12%)
Query: 1170 LQQVDKKFIPVVAGGT---LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVL 1226
+ Q+D +I VA G L +IDQHAA ERI E+ + + +A Q + L
Sbjct: 442 IGQIDCTYI--VAQGREAGLYLIDQHAAHERILYEKNMQVPTTNYSQLLAI---PQHIEL 496
Query: 1227 PEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLS 1286
+ Q+L + + G++ I G SF L VP F
Sbjct: 497 THLEAQVLITNILEFQAIGFV--IEHFGGDSF--------------LLRGVPGGFPPGKE 540
Query: 1287 DVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
L+ L T ++ +C+ AI GD LL + ++ +L T L
Sbjct: 541 KKIFLDLLDYFFSNQHKLTNKELREDLIIMMSCKAAIKAGDRLLQGQMEKLLADLSNTEL 600
Query: 1347 CFQCAHGRPTTVPL--VNLEALHKQI 1370
+ C HGRPT + + LE + K++
Sbjct: 601 PYTCPHGRPTVIHISGYELEKMFKRV 626
>gi|167765429|ref|ZP_02437542.1| hypothetical protein BACSTE_03819 [Bacteroides stercoris ATCC
43183]
gi|167697057|gb|EDS13636.1| DNA mismatch repair domain protein [Bacteroides stercoris ATCC
43183]
Length = 630
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 188/384 (48%), Gaps = 47/384 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA AT++ V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEATEIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALAS++ V+ +E+ T+ G
Sbjct: 65 MSETDARLSFERHA-TSKIREASDL---FALRTMGFRGEALASVAAVAEVELKTRPAGEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRLVIAGSKV------ESQEAVSCPKGSNFSVKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP V+F + S D L +++ FG + L V+ +
Sbjct: 174 AEFERIALVHPDVAFY---LYSNDAELFNLPVMPLRQRILAIFGKKLNQQLLSVDVDTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SG+++ P S A QY ++N RY+ HK + D+++
Sbjct: 231 IKVSGFVAKPEASRKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 -----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELP-LESSR 376
A S D D ++P E SR
Sbjct: 329 FNAVPSIDFDTEGMPDIPAFEQSR 352
>gi|423272316|ref|ZP_17251284.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL05T00C42]
gi|423276772|ref|ZP_17255704.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL05T12C13]
gi|392695508|gb|EIY88720.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL05T00C42]
gi|392695984|gb|EIY89188.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL05T12C13]
Length = 625
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 184/378 (48%), Gaps = 46/378 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAHNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKIIIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L C ++S FG + L V N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSELFNLPACHLRQ---RILSVFGKKLNQQLLSVEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 231 VKVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + +I+ + K
Sbjct: 274 -----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASIKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELP 371
A S D D + ++P
Sbjct: 329 FNAVPSIDFDTEDMPDIP 346
>gi|258511467|ref|YP_003184901.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478193|gb|ACV58512.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 622
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 165/349 (47%), Gaps = 35/349 (10%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVDDGSGIS 64
+P+ + + + +G V+ V+ELV NS+DAGAT++ V + G C V VVDDG G+S
Sbjct: 1 MPKVMADQIAAGEVVARPASCVKELVENSLDAGATRIEVSLAEGGIAC-VTVVDDGEGMS 59
Query: 65 RDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNG 124
+ VL RHA TSK+ D+ I T GFRGEALA+I+ V+ + +IT+A G +G
Sbjct: 60 PEDAVLAFHRHA-TSKVHEPRDL---ARIRTLGFRGEALAAIASVARVRLITRARGEESG 115
Query: 125 YRKVMKGSKC---LYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++G + +G GTT+ RDLF+N P R KY++S+ + SV + V
Sbjct: 116 VLVRVEGGEIHPPEPIG-----APFGTTMEVRDLFFNTPARLKYLRSAQTEQARSV-EVV 169
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
R +L HP+V+ F+ L T + + +G+ + L EV G +
Sbjct: 170 QRESLAHPEVA--FVCRTERQVLFQTPGRGDAREVWAALYGVGEARMLIEVRGTTGDYAL 227
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
GY+ P + S + Y++IN R V + + + G+R
Sbjct: 228 RGYVGRPTQARSSRQHGYLFINGRPVRNPAVQQAVER-----------------AYGERL 270
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P Y L L +L D P K V + V +E A+R+A
Sbjct: 271 MVGRYPVYALYLEMDPALVDPNVHPQKWEVRLSEERDVCHLVESAVRAA 319
>gi|365853735|ref|ZP_09394000.1| DNA mismatch repair protein [Lactobacillus parafarraginis F0439]
gi|363711893|gb|EHL95599.1| DNA mismatch repair protein [Lactobacillus parafarraginis F0439]
Length = 393
Score = 134 bits (336), Expect = 5e-28, Method: Composition-based stats.
Identities = 115/353 (32%), Positives = 172/353 (48%), Gaps = 31/353 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I+ LP + N + +G V+ VV+ELV N++DA +T+V V V +KVVDDG G
Sbjct: 7 IHELPPILANQISAGEVVERPASVVKELVENAIDAHSTQVDVTVENAGLKLIKVVDDGDG 66
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I D + RH ATSK + + D + T GFRGEAL SIS V+ +++ K
Sbjct: 67 IDADQVQTAFLRH-ATSK---ITEQRDLFRVRTLGFRGEALPSISSVA--DVVLKTSTGA 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G KG K + + RK GTTV R LFYN P R KY+ SSP L + V
Sbjct: 121 MGTEVTYKGGKFVSQSASESRK--GTTVEVRSLFYNTPARLKYL-SSPNTELAKISDIVN 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP+V+F F + ELL T L +L + +G++ S + + + + L I+
Sbjct: 178 RLALSHPEVAFSF--TSNGRELLRTSGRGDLLQVLGAIYGVKTVSKMVPIQSEEPDLAIN 235
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++S P + + + + + +N R+V P+ + A D G+ G +
Sbjct: 236 GFVSLPELTRASRNYISLILNGRFVRNYPLTR------AVID---------GY--GSKLM 278
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLA-FIERAIRSAWMKK 354
P ++N++ +L D+ P K V + EP L I AIR K
Sbjct: 279 IGRFPIAVINIKLDPALVDVNVHPTKQEVRISE-EPKLGHMISNAIRQMLATK 330
>gi|271502155|ref|YP_003335181.1| DNA mismatch repair protein MutL [Dickeya dadantii Ech586]
gi|270345710|gb|ACZ78475.1| DNA mismatch repair protein MutL [Dickeya dadantii Ech586]
Length = 645
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 172/351 (49%), Gaps = 33/351 (9%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
+I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G
Sbjct: 2 SIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNGC 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GIS+ L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 62 GISKADLALALARHA-TSKI---ATLDDLEAIVSLGFRGEALASISSVSRLTLTSRTDAQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++ +G + + + + VGTT+ DLFYN P RRK++++ + +H + + V
Sbjct: 118 TEAWQAYAEGRE-MAVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFMH-IDEVV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDG 237
RIAL V+ I + +L+ + S A G I +FL V+ G
Sbjct: 176 RRIALARFDVA---ITLHHNGKLIRQYRAVSESAQRERRLGSICGAAFLQHALAVSWQHG 232
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
L I G+++ P S + QY Y+N R + +L+NH +
Sbjct: 233 DLNIHGWVADPAGSRQLPEMQYCYVNQRMMRD----RLINH-----------AIRQAYQD 277
Query: 298 GKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
R + Q PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 278 QLRDEQQ--PAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|332300228|ref|YP_004442149.1| DNA mismatch repair protein mutL [Porphyromonas asaccharolytica DSM
20707]
gi|332177291|gb|AEE12981.1| DNA mismatch repair protein mutL [Porphyromonas asaccharolytica DSM
20707]
Length = 646
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 193/395 (48%), Gaps = 41/395 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ +++ELV N++DA AT++ + + ++V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASMLKELVENAIDAHATQITIELQDAGKELMRVIDDGVG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +DD + + GFRGEALASI V+ +E++T+
Sbjct: 65 MSPLDARMAFERHA-TSKI---SSVDDLFTLRSMGFRGEALASIVAVAQIELVTRQVDSD 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
GY+ ++ GS+ + +VGT++ ++LFYN P RR++++ S ++ H + +
Sbjct: 121 IGYKLLINGSEV--ISSSPTVAEVGTSITVKNLFYNVPARRRFLKGSETELRH-IYRQFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+P+++F + SE +L+ S ++ G L + +S
Sbjct: 178 RIALVYPEIAFT---LYSEGKLIRNLPKSDLQHRIVDLLGKSYSKQLIPIEYQGPLANVS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+I+ P D+ A Q+ ++N RY+ H+ + ++ S
Sbjct: 235 GFITLPRDAKRRGAQQFFFVNGRYMKHPYFHRAVMNVFEDLIAPGSQ------------- 281
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR-----SAWMKKIAH 357
P Y + + S D+ P KT + F D + + + +R ++ M I
Sbjct: 282 ----PNYFIYFQVDPSRIDVNIHPTKTEIKFLDEQAIFKLLMVVLREHLSTTSAMPAI-- 335
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLK 392
+F D L E+P + + QSS+ L P++
Sbjct: 336 -TFSTDQL--IEIPAYDA---TRQSSSTLQPPPVQ 364
>gi|167041133|gb|ABZ05893.1| putative DNA mismatch repair protein, C-terminal domain protein
[uncultured marine microorganism HF4000_001A02]
Length = 585
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 190/381 (49%), Gaps = 46/381 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I +L E +RN + +G V+ VV+ELV N +DAGAT++ V V ++V D+GSG
Sbjct: 2 IKQLSEDLRNKISAGEVVERPASVVKELVENGIDAGATEITVVVEKGGQQLIQVTDNGSG 61
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
IS L + E + +TSK+G +DD I T GFRGEALASI+ VS + +++
Sbjct: 62 ISAKELPIAFESY-STSKIG---SVDDLFNIDTLGFRGEALASIASVSEVNVLSANESGD 117
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV-GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++ G +LG V GT++ R+LFYN P R+K+++ SP+ V + V
Sbjct: 118 GSEMSILNG----HLGAVQPAPAVQGTSITIRNLFYNTPARKKFLK-SPRMEFRKVVEMV 172
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNANDGA 238
R AL +P +FK I S++ + S + ++ + D ++ D+ V+ G
Sbjct: 173 RRFALSYPDRNFKLI---SDNRDILNLQSEKLESRIVH---VMDPAYRDQLLPVDFTKGD 226
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL-K 297
ISGY+ + + QY+++N R++ ++L+N S ++A + +
Sbjct: 227 YTISGYLGNLNLIRTRPGEQYIFLNERFIQ----NRLMN--------SGVYQAYKSIINR 274
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
G+ P + LN+ PH D+ P+KT V FKD + ++ AI A + I H
Sbjct: 275 GE------YPFFALNISVPHDEVDVNVHPMKTEVRFKDEWRIYHVLKSAIEEA-LSPILH 327
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+ D E P SS F+
Sbjct: 328 ------TIPDFEKPGFSSDFE 342
Score = 49.7 bits (117), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 1166 DAKVLQQVDKKFI--PVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAE-- 1221
D + + QV K+I P+ +G L +IDQH A ERI EE+ +A DA
Sbjct: 398 DLEKIWQVHSKYIVSPITSG--LVIIDQHVAHERILYEEV-----------MAAFDANPM 444
Query: 1222 --QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC 1279
Q L+ PE+ F+ + ++ + + + F KN +++ A+P
Sbjct: 445 AAQTLLFPEVMEFSPDEFSTLLDVLPYLEKMGFR-MKEFGKNTVMIE---------AIPS 494
Query: 1280 IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1339
+ E L DT + L S AC+ A+ GD L E +V
Sbjct: 495 EMAWGNEKTIIREMLDNYLDTQKKHASFQEALAA--SFACKAAVKAGDVLNGEEMRELVN 552
Query: 1340 ELKQTSLCFQCAHGRPTTVPL 1360
L T + C HGRP + L
Sbjct: 553 RLFGTKHPYYCPHGRPIIIQL 573
>gi|317056654|ref|YP_004105121.1| DNA mismatch repair protein MutL [Ruminococcus albus 7]
gi|315448923|gb|ADU22487.1| DNA mismatch repair protein MutL [Ruminococcus albus 7]
Length = 693
Score = 134 bits (336), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 187/389 (48%), Gaps = 50/389 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I L V + +G V+ V++EL+ N++DAGAT + V + Y++V D+
Sbjct: 1 MSEIRVLSREVSELIAAGEVIDRPASVIKELLENAIDAGATVITVEIKNGGRTYMRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ D L + RHA TSK+ D+D I T GFRGEALASI V+ ++++TK
Sbjct: 61 GKGLAPDDLPIAFLRHA-TSKISQKDDLD---SIMTLGFRGEALASICAVAKVDVMTKRR 116
Query: 120 GRPNGYRKVMKGS------KCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
G ++G+ +C G D GTT + RD+FYN P R K+++ +
Sbjct: 117 EDSYGTHYAIEGAEEKISEQC---GCPD-----GTTFIVRDIFYNVPARLKFLKKDSSEA 168
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 233
H V V ++ L HP +SFK I ++++E++ T + + S +G E + L EV+
Sbjct: 169 NH-VADLVTKLTLSHPDISFKLI-RDNKNEII-TAGDGKIYSSVYSVYGREFANSLIEVD 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+ + GY P + + FQ ++NSR+V A + ++++ N
Sbjct: 226 HTWQGIHVYGYTVKPLSAKPNRKFQNFFVNSRFV---------RSKACAAAIEEAYR--N 274
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ GK PA +L + P + D+ P K V F D + + + A+++A M+
Sbjct: 275 NIMVGK------FPACVLYIDVPPNTIDVNVHPTKIEVRFSDEKLIHEAVFFAVKNALME 328
Query: 354 KIAHDSFDVDMLEDAELPLESSR-FQSHQ 381
K E EL L SR F H+
Sbjct: 329 KD----------EPGELVLNDSRNFTDHE 347
>gi|226326650|ref|ZP_03802168.1| hypothetical protein PROPEN_00500 [Proteus penneri ATCC 35198]
gi|225204871|gb|EEG87225.1| DNA mismatch repair domain protein [Proteus penneri ATCC 35198]
Length = 670
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 169/351 (48%), Gaps = 27/351 (7%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
IN LP + N + +G V+ VV+EL+ NS+DAGAT + + + +++ D+G
Sbjct: 2 AINLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATSIDIDIDKGGAKLIRIRDNGC 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI+RD L L RHA TSK+ + +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 62 GINRDDLKLALARHA-TSKI---STLDDLEAIMSMGFRGEALASISSVSRLILTSRTQDQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++ +G + + + I VG+TV DLFYN P RRK++++ + H + + +
Sbjct: 118 EEAWQAYAEG-RDMAVTIKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFAH-IDEVI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD-EVNANDGALE 240
RIAL V+ S +S+ +F +++ G L
Sbjct: 176 RRIALSRFDVTINLTHNGKRVRQYRAVKDESQQNRRLSAICGNNFVNQSMQLSWEHGDLA 235
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
I G++ P + QY Y+N R + +L+NH +A G+L+G++
Sbjct: 236 IKGWVEHPLSPVQSSEIQYCYVNGRMMRD----RLINHAIR--------QAYEGYLQGEQ 283
Query: 301 SKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P+Y+L L PH + D+ P K V F + V FI + + S
Sbjct: 284 Q-----PSYILYLSVDPHQV-DVNVHPAKHEVRFHESRLVHDFIYQGVLSV 328
>gi|229496657|ref|ZP_04390371.1| DNA mismatch repair protein MutL [Porphyromonas endodontalis ATCC
35406]
gi|229316554|gb|EEN82473.1| DNA mismatch repair protein MutL [Porphyromonas endodontalis ATCC
35406]
Length = 641
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 205/445 (46%), Gaps = 56/445 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ +++ELV NS+DAGA ++ V V +KV DDG G
Sbjct: 5 IHVLPDSIANQIAAGEVIQRPASILKELVENSLDAGAKRIIVEVEEAGKASLKVTDDGCG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S+ + ERH ATSK ++D+ D + + GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSQMDARMAFERH-ATSK---ISDVQDLFSLRSMGFRGEALASIASVAQVELTTRRAEDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+ + GS + + + VG++ + R++F+N P RR++++S+ ++ H +++
Sbjct: 121 MATQLTLNGSDV--VSVRNVAAPVGSSFMVRNVFFNVPARRRFLKSNQTELKHLIEQFE- 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI LV+P VSF F S+ L +++ + + G L ++ + I+
Sbjct: 178 RIVLVYPGVSFSFY---SDGNLTLNLPATTQRRRITDTLGQSVDKGLIPIHFENEISNIN 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++S P + A QY+++N RY+ H+ + + + G+
Sbjct: 235 GFVSLPDYAKKRGAEQYLFVNGRYMRHPYFHRAILSVYEKL-------LSPGY------- 280
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P Y L S D+ P KT + F D + + + AIR + +A + D
Sbjct: 281 ---APNYFLFFSIDPSRIDVNIHPTKTEIKFLDEQAIFKLLAIAIRQSLSTTMAVPTIDF 337
Query: 363 DMLEDAELPLESSR------------------FQS-----HQSSTHLHSSPLKNLAKQRD 399
+ ++P+ S + F S QSS +S+P +
Sbjct: 338 EHKNVVDIPIYSGKQKEVLPSPDQPLDPDYNPFNSTDLPITQSSAKGYSAPSRRPKVDWK 397
Query: 400 HMF-----HKECERITFQEFQKDPV 419
MF HKE TF + + P+
Sbjct: 398 SMFESFEQHKENRATTFSQKEAAPI 422
>gi|238787537|ref|ZP_04631335.1| DNA mismatch repair protein mutL [Yersinia frederiksenii ATCC
33641]
gi|238724324|gb|EEQ15966.1| DNA mismatch repair protein mutL [Yersinia frederiksenii ATCC
33641]
Length = 642
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 188/381 (49%), Gaps = 37/381 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
IS+D L L RH ATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISKDDLALALARH-ATSKISSLEDLE---AILSMGFRGEALASISSVSRLMLTSRTAQQN 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VG+TV DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTIKPAAHPVGSTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIAL V+ I++ +L+ S L S G ++ G
Sbjct: 177 RIALARFDVA---INLSHNGKLMRHYRAAPDPSQHERRLASICGPAFLQHALAISWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S ++ QY Y+N+R + +L+NH +A LK
Sbjct: 234 LTIRGWVADPAASRTLSEMQYCYVNNRMMRD----RLINHAIR--------QAYQDLLKD 281
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 282 DQQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQAAT 334
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+++ ED E +E+ R+Q
Sbjct: 335 PVLNIN--EDGE-EIEAPRWQ 352
>gi|283797911|ref|ZP_06347064.1| DNA mismatch repair protein MutL [Clostridium sp. M62/1]
gi|291074378|gb|EFE11742.1| DNA mismatch repair domain protein [Clostridium sp. M62/1]
Length = 734
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 169/352 (48%), Gaps = 27/352 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ VV+EL+ N++DA AT V + + ++V D+
Sbjct: 1 MANIRVLDQNTINQIAAGEVIERPASVVKELLENAIDARATAVTIEIKEGGIGLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI R+ + RHA TSK+ ++D + + GFRGEAL+SI+ V+ +E+ITK
Sbjct: 61 GCGIPREEIPTAFLRHA-TSKI---RTVEDLFTVASLGFRGEALSSIASVAQVELITKTE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G R + G + I++ GTT + R+LFYN P RRK++++ + H +
Sbjct: 117 DSMSGTRYCIDGGE--EKSIEEVGAPEGTTFLVRNLFYNTPARRKFLKTPATEGAH-IAD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +I+L HP+VS +FI ++ L T + S ++ + +G E S L V+ + +
Sbjct: 174 LVEKISLSHPEVSIRFI--QNGQSRLHTSGNHSLRDIIYTIYGREIASNLLPVDMGEDPV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++G+I P + + F+ +IN RY+ I+K + F +
Sbjct: 232 RVTGFIGKPLIARGNRNFENYFINGRYIKSSLINKAIEDAYKPFMMQHKY---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P +L+ S D+ P K + F+D E + + + A
Sbjct: 282 -------PFTMLHFAIESSFLDVNVHPAKMELRFRDGEMIYKMVYHTVSMAL 326
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 29/226 (12%)
Query: 1153 FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEG 1212
F P +++ E+ +++ Q+ + V +L +IDQHAA E++ E+ + S E
Sbjct: 532 LFEPKLLSREAREEHRIIGQLFDTYWLVEYRDSLYIIDQHAAHEKVLYEKTVASLKSREY 591
Query: 1213 KSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVI 1272
S ++ L L LL+ + E G+ I G R +
Sbjct: 592 TS-QMINPPIILTLNSSEKLLLEKYMEHFTGIGF--EIEPFGGREY-------------- 634
Query: 1273 TLLAVPC-IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSK----ACRGAIMFGD 1327
+ AVP +F + ++ L+E + L+D + +LN K +C+ A+
Sbjct: 635 AVRAVPANLFSIAKKEL-LMEMIDGLSDEMDRGNSD-----LLNEKIASMSCKAAVKGNH 688
Query: 1328 SLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1373
L +E +++EL + + C HGRPT + + E L K+ ++
Sbjct: 689 RLSEAEARALIDELLELENPYACPHGRPTIISMSRYE-LEKKFKRI 733
>gi|440714151|ref|ZP_20894736.1| DNA mismatch repair protein MutL [Rhodopirellula baltica SWK14]
gi|436440950|gb|ELP34231.1| DNA mismatch repair protein MutL [Rhodopirellula baltica SWK14]
Length = 705
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 173/351 (49%), Gaps = 29/351 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I +LP + N + +G V+ VV+EL+ NS+DAG+T++ + + G +++ DDG G
Sbjct: 15 IRQLPAHLVNQIAAGEVIERPASVVKELLENSIDAGSTRIELSLEGGGVELIRISDDGCG 74
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ + L L HA TSKL D + +GT GFRGEALASI+ VS + I ++A G+
Sbjct: 75 MTAEQLPLAVTSHA-TSKL---PDDESLFHVGTLGFRGEALASIASVSQMTIRSRAEGQD 130
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + ++G G VGT + R+LF+N PVRRK+++ +P+ + +
Sbjct: 131 GGCQIDIRGGVIETPGPCG--CPVGTVIEVRNLFFNTPVRRKFLK-TPQTERGHIVEAFT 187
Query: 183 RIALVHPKVSFKFIDMESED-ELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
R+AL +PKV F + + E +LL T + + S FG E L + D ++I
Sbjct: 188 RLALANPKVHFVLRNGDKEMFDLLPTTRWADRIE---SFFGTEISEALIPIENQDETVQI 244
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
SGY P S QY+++N R++ + L H +A G L R
Sbjct: 245 SGYACDPSVSRGNNRMQYLFLNGRHIRD----RALQHALG--------EAYRGMLMVGRH 292
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
P L +R P + D+ P K V F D V + + + +R ++
Sbjct: 293 -----PVCFLRMRMPADMIDVNVHPAKLEVRFTDSGRVYSRLLQTLRQRFL 338
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 19/189 (10%)
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1231
QV ++++ + VIDQHA ER+ E + KVL + A L+A+Q LV +
Sbjct: 510 QVHQRYLVTQDEKGMVVIDQHALHERVLYERVCQKVLHED----ASLEAQQLLVPEPVSL 565
Query: 1232 QLLQNFAE-QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1290
+ A ++KD + + F L+Q + P + N D+
Sbjct: 566 TPAERAAALEVKDTLSRIGLEIE---DFGGETILIQ---------SYPAML-PNKPPADM 612
Query: 1291 LEFLQQLADTDGSSTTPPSVLR-VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQ 1349
L + + G P +L +L++ AC+ A+ GD L P E ++E+
Sbjct: 613 LRTVLESVMGAGRDPNPKDLLNHLLSTVACKAAVKAGDPLSPEEITSLLEQKDLYQETHH 672
Query: 1350 CAHGRPTTV 1358
C HGRPT +
Sbjct: 673 CPHGRPTAL 681
>gi|423318197|ref|ZP_17296094.1| DNA mismatch repair protein mutL [Lactobacillus crispatus FB049-03]
gi|423320487|ref|ZP_17298359.1| DNA mismatch repair protein mutL [Lactobacillus crispatus FB077-07]
gi|405596686|gb|EKB70019.1| DNA mismatch repair protein mutL [Lactobacillus crispatus FB049-03]
gi|405605091|gb|EKB78158.1| DNA mismatch repair protein mutL [Lactobacillus crispatus FB077-07]
Length = 641
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 177/364 (48%), Gaps = 36/364 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MSKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GI+RD + L RH ATSK +A+ D + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRH-ATSK---IANEHDLFKVSTLGFRGEALASISAVSHVEILT- 113
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
A G R G G +D GT + +DLF+N P R KY++SS +++ V
Sbjct: 114 ATENAIGIRANYSGGNK--KGQEDAAARKGTKITVKDLFFNTPARLKYLRSSRTEIMKIV 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R+ L +P VSF + + LL T +++ + + +G +++ A D
Sbjct: 172 -DIINRLVLGYPHVSFTLSN--TGKILLRTPGNNNLKQTVANVYGRHIAEKMEKFEAKDS 228
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+I+G +S P + S + F + +N RY+ +++ N L
Sbjct: 229 DFKITGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQLNTAILD 269
Query: 298 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
G SK A P +L ++ L D+ P K V + + I AI + ++K+
Sbjct: 270 GYGSKLAARHYPIIVLAIKVDPLLVDVNVHPTKQEVRLSKEKELGRLITSAISNTLVEKV 329
Query: 356 AHDS 359
S
Sbjct: 330 GQIS 333
>gi|227326201|ref|ZP_03830225.1| DNA mismatch repair protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 670
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 173/352 (49%), Gaps = 33/352 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHA-TSKI---ATLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 238
RIAL V+ I + +L+ ++ + G I +FL V+ G
Sbjct: 177 RIALARFDVA---ITLHHNGKLMRQYRAAPDKSQYERRLGSICGATFLQHALAVSWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P + + QY Y+N R + +L+NH A +
Sbjct: 234 LTIHGWVAEPVGAKQLPDMQYCYVNQRMMRD----RLINH------------AIRQAYQD 277
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
+ S Q PAY+L L PH + D+ P K V F V FI +A+ S
Sbjct: 278 QLSDDQQ-PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMS 327
>gi|320103230|ref|YP_004178821.1| DNA mismatch repair protein MutL [Isosphaera pallida ATCC 43644]
gi|319750512|gb|ADV62272.1| DNA mismatch repair protein MutL [Isosphaera pallida ATCC 43644]
Length = 699
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 177/359 (49%), Gaps = 29/359 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L +V N + +G V+ VV+EL+ N++DAGA ++ + V ++VVD+
Sbjct: 1 MGIIRELSPSVINQIAAGEVVERPASVVKELLENAIDAGADRIEIAVERGGKDLIRVVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D L L HA TSKL + DD I T GFRGEALA+I+++S + ++
Sbjct: 61 GKGIAPDDLPLAFRPHA-TSKL---READDLQRIATLGFRGEALAAIAEISKVCCESRTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G+R + G + ++ VGT + R LF+N PVRR +++S + H V +
Sbjct: 117 EAETGFRLRIDGGRA--GAVEPCSCPVGTIMEVRHLFFNTPVRRTFLKSDATEAGH-VAE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
V R+AL HP V F S +++ +++ L I++ FG E L V +
Sbjct: 174 MVTRLALAHPSVHFT---SRSSGKVVFDLPATTCLTDRIAALFGRELADQLIGVEHDVPG 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ + G++S P S S FQY+++N RYV + L H A +A G L
Sbjct: 231 VGLRGFVSHPSHSRSSSKFQYLFLNGRYVRD----RSLQHALA--------EAYRGLLMV 278
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
R P LNL P D+ P K V F++ + + + AI+ A++K H
Sbjct: 279 GR-----YPVAFLNLEVPLDQVDVNVHPTKIEVRFREAHLIYSALYSAIKQAFLKTDLH 332
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 26/192 (13%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L VIDQHA ERI EE + ++ G +S Q L++PE A +
Sbjct: 530 LMVIDQHALHERILFEEFKERLERGGVES-------QRLLIPETVELTPAEAAALTERLD 582
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1305
+ + + S F + L+ A+P L V+ ++ LAD
Sbjct: 583 LLAKLGIELS-GFGGSTVLVH---------ALPA----QLKHVEADRLVRDLADHLLQRP 628
Query: 1306 TPPS----VLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV 1361
PP+ ++ +LN AC+ AI G L P E ++E C HGRPT + L+
Sbjct: 629 LPPTPEGLMMDLLNMMACKAAIKAGQKLSPDEIDALLERRHLARDSHHCPHGRPTVL-LL 687
Query: 1362 NLEALHKQIAQL 1373
L KQ ++
Sbjct: 688 TKSDLEKQFGRV 699
>gi|29349259|ref|NP_812762.1| DNA mismatch repair protein mutL [Bacteroides thetaiotaomicron
VPI-5482]
gi|298384799|ref|ZP_06994358.1| DNA mismatch repair protein MutL [Bacteroides sp. 1_1_14]
gi|383120181|ref|ZP_09940912.1| DNA mismatch repair protein mutL [Bacteroides sp. 1_1_6]
gi|81842112|sp|Q8A120.1|MUTL_BACTN RecName: Full=DNA mismatch repair protein MutL
gi|29341167|gb|AAO78956.1| DNA mismatch repair protein mutL [Bacteroides thetaiotaomicron
VPI-5482]
gi|251840776|gb|EES68858.1| DNA mismatch repair protein mutL [Bacteroides sp. 1_1_6]
gi|298261943|gb|EFI04808.1| DNA mismatch repair protein MutL [Bacteroides sp. 1_1_14]
Length = 640
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 181/378 (47%), Gaps = 46/378 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++++DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQIIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREAADL---FALRTMGFRGEALASIAAVAQVELKTRLESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKLVIAGSKV------ESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L S +++ FG + L + N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSE---LFNLPVSPLRQRILAIFGKKLNQQLLNIEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ISGYI+ P + A QY ++N RY+ HK +
Sbjct: 231 VKISGYIAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------------------- 268
Query: 299 KRSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ Q P +Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 269 MEAYEQLIPVGEQVSYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELP 371
A S D D + ++P
Sbjct: 329 FSAIPSIDFDTEDMPDIP 346
>gi|421221742|ref|ZP_15678543.1| DNA mismatch repair protein mutL domain protein [Streptococcus
pneumoniae 2070531]
gi|395590833|gb|EJG51133.1| DNA mismatch repair protein mutL domain protein [Streptococcus
pneumoniae 2070531]
Length = 302
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 144/268 (53%), Gaps = 10/268 (3%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GIS D + L RHA TSK+ + AD+ I T GFRGEAL SI+ VS+L ++T
Sbjct: 61 GYGISHDEVELALRRHA-TSKIKNQADLFR---IRTLGFRGEALPSIASVSVLTLLTAVD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G +G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 117 GASHGTKLVARGGEVEE--VIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSH-IID 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D
Sbjct: 174 IVNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYV 267
EISG++S P + + + + ++IN RY+
Sbjct: 232 EISGFVSLPELTRANRNYISLFINGRYI 259
>gi|256841008|ref|ZP_05546515.1| DNA mismatch repair protein mutL [Parabacteroides sp. D13]
gi|256736851|gb|EEU50178.1| DNA mismatch repair protein mutL [Parabacteroides sp. D13]
Length = 621
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 179/370 (48%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+ + N + +G V+ VV+ELV N+VDAGA+ + V + ++V+DDG G
Sbjct: 11 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 70
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +D + T GFRGEALASI+ V+ +E+ T+A G
Sbjct: 71 MSETDARMAFERHA-TSKI---STAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGAE 126
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + GS I+ E + G+ ++LF+N P RRK+++S+ + + + +
Sbjct: 127 LGTCLSIAGSNL--ESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINE-FE 183
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+P+V ++E + S +I+ +G L ++A + IS
Sbjct: 184 RIALVNPQVGMSLYHNDAE---IFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTIS 240
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A Q+ ++N RY+ HK + +A +
Sbjct: 241 GFVGRPDSAKKRGALQFFFVNGRYMKHPYFHKAI------------MQAYEQLIPAGD-- 286
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P Y + S D+ P KT + F++ +P+ + A R A K A + D
Sbjct: 287 ---MPNYFVYFTLDPSSIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDF 343
Query: 363 DMLEDAELPL 372
D+ + ++P+
Sbjct: 344 DVEDAIDIPV 353
>gi|89100700|ref|ZP_01173556.1| DNA mismatch repair protein [Bacillus sp. NRRL B-14911]
gi|89084575|gb|EAR63720.1| DNA mismatch repair protein [Bacillus sp. NRRL B-14911]
Length = 640
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 164/332 (49%), Gaps = 29/332 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I +L +A+ N + +G V+ VV+ELV NS+DAG+T + + ++++D+
Sbjct: 1 MGKIVQLDDALSNKIAAGEVVERPASVVKELVENSIDAGSTIIEIDAEEAGLAKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI D ++ +RH ATSK + D +D I T GFRGEAL SI+ VS LE+ T
Sbjct: 61 GEGIEEDDVMTAFQRH-ATSK---IKDENDLFRIRTLGFRGEALPSIASVSRLELKTSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R +++G K RK GT + DLFYN P R KYM++ + L ++
Sbjct: 117 D--AGTRILIEGGKVAEFEKAASRK--GTDITISDLFYNTPARLKYMKTIHTE-LGNITD 171
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP+VSF+ + + +LL T + + +L S +G+ + V A+
Sbjct: 172 VVNRLALAHPEVSFRLV--HNGRKLLHTAGNGNVQQVLASIYGMNIVKKMIPVEASSLDF 229
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ GYI+ P + + + + IN R++ P+ K + + + L
Sbjct: 230 HVHGYIALPEITRASRNYISTMINGRFIKNYPLVKAIQ------------EGYHTLLPIG 277
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHV 331
R P LLN++ L D+ P K V
Sbjct: 278 R-----YPIVLLNVQMDPLLVDVNVHPSKMEV 304
>gi|32475085|ref|NP_868079.1| DNA mismatch repair protein [Rhodopirellula baltica SH 1]
gi|32445625|emb|CAD75626.1| DNA mismatch repair protein [Rhodopirellula baltica SH 1]
Length = 705
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 173/351 (49%), Gaps = 29/351 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I +LP + N + +G V+ VV+EL+ NS+DAG+T++ + + G +++ DDG G
Sbjct: 15 IRQLPAHLVNQIAAGEVIERPASVVKELLENSIDAGSTRIELSLEGGGVELIRISDDGCG 74
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ + L L HA TSKL D + +GT GFRGEALASI+ VS + I ++A G+
Sbjct: 75 MTAEQLPLAVTSHA-TSKL---PDDESLFHVGTLGFRGEALASIASVSQMTIRSRAEGQD 130
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + ++G G VGT + R+LF+N PVRRK+++ +P+ + +
Sbjct: 131 GGCQIDIRGGVIETPGPCG--CPVGTVIEVRNLFFNTPVRRKFLK-TPQTERGHIVEAFT 187
Query: 183 RIALVHPKVSFKFIDMESED-ELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
R+AL +PKV F + + E +LL T + + S FG E L + D ++I
Sbjct: 188 RLALANPKVHFVLRNGDKEMFDLLPTTRWADRIE---SFFGTEISEALIPIENQDETVQI 244
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
SGY P S QY+++N R++ + L H +A G L R
Sbjct: 245 SGYACDPSVSRGNNRMQYLFLNGRHIRD----RALQHALG--------EAYRGMLMVGRH 292
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
P L +R P + D+ P K V F D V + + + +R ++
Sbjct: 293 -----PVCFLRMRMPADMIDVNVHPAKLEVRFTDSGRVYSRLLQTLRQRFL 338
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 19/189 (10%)
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1231
QV ++++ + VIDQHA ER+ E + KVL + A L+A+Q LV +
Sbjct: 510 QVHQRYLVTQDEKGMVVIDQHALHERVLYERVCQKVLHED----ASLEAQQLLVPEPVSL 565
Query: 1232 QLLQNFAE-QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1290
+ A ++KD + + F L+Q + P + N D+
Sbjct: 566 TPAERAAALEVKDTLSRIGLEIE---DFGGETILIQ---------SYPAML-PNKPPADM 612
Query: 1291 LEFLQQLADTDGSSTTPPSVLR-VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQ 1349
L + + G P +L +L++ AC+ A+ GD L P E ++E+
Sbjct: 613 LRTVLESVMGAGRDPNPKDLLNHLLSTVACKAAVKAGDPLSPEEITSLLEQKDLYQETHH 672
Query: 1350 CAHGRPTTV 1358
C HGRPT +
Sbjct: 673 CPHGRPTAL 681
>gi|390943214|ref|YP_006406975.1| DNA mismatch repair protein MutL [Belliella baltica DSM 15883]
gi|390416642|gb|AFL84220.1| DNA mismatch repair protein MutL [Belliella baltica DSM 15883]
Length = 627
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 175/368 (47%), Gaps = 40/368 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+A+ N + +G V+ ++E++ N+VDAGAT+V V V + V+D+G G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASALKEMLENAVDAGATQVQVVVKDAGKALMLVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ + ERHA TSK+ AD+ I TFGFRGEA+ASI+ VS +E+ T+ G
Sbjct: 65 MTLTDARMCFERHA-TSKIRTSADL---FAIHTFGFRGEAMASIAAVSQVEMKTRQAGDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G ++GS+ +++ + GT++ ++LF+N P RR +++S+ ++ H V
Sbjct: 121 LGTLIQIEGSEF------KKQEPISCPQGTSIAVKNLFFNVPARRNFLKSNAVEMKHLVD 174
Query: 179 KCVLRIALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ R+AL +P++ FKF DME L ++ FG L
Sbjct: 175 E-FQRVALSYPEIGFKFTQNDME-----LFNLVPGKLSQRIVGIFGKNYQGQLVTCQEET 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
L I GYI P ++ + QY ++N+R++ +H +++ SD
Sbjct: 229 PHLNIKGYIGKPENAKKTRGEQYFFVNNRFIRSNYLHHAVSNAYEGLMPSDMQ------- 281
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
P Y+L L S D+ P KT + F D V A I A++ +
Sbjct: 282 ----------PFYVLFLEIDPSHIDINVHPTKTEIKFDDERTVYAVIRSAVKQSLGAHNV 331
Query: 357 HDSFDVDM 364
+ D +M
Sbjct: 332 VPALDFNM 339
>gi|395230101|ref|ZP_10408409.1| DNA mismatch repair protein mutL [Citrobacter sp. A1]
gi|424733302|ref|ZP_18161867.1| dna mismatch repair protein mutl [Citrobacter sp. L17]
gi|394716395|gb|EJF22150.1| DNA mismatch repair protein mutL [Citrobacter sp. A1]
gi|422892490|gb|EKU32349.1| dna mismatch repair protein mutl [Citrobacter sp. L17]
Length = 623
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 173/369 (46%), Gaps = 54/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQP 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ K + + + +
Sbjct: 119 EAWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIR 176
Query: 183 RIALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ +D + E L C + L + IE
Sbjct: 177 RIALARFDVTINLSHNGKVVRQYRAVAVDGQKERRLGAICGTP----FLEHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLRGWVADPNHTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKI 355
+ S +++
Sbjct: 326 VLSVLQQQL 334
>gi|150025219|ref|YP_001296045.1| DNA mismatch repair protein MutL [Flavobacterium psychrophilum
JIP02/86]
gi|167017341|sp|A6GYR1.1|MUTL_FLAPJ RecName: Full=DNA mismatch repair protein MutL
gi|149771760|emb|CAL43234.1| DNA mismatch repair protein MutL [Flavobacterium psychrophilum
JIP02/86]
Length = 613
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 167/346 (48%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGA+ + + ++V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASDIKLICKEAGKVLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ D+ D + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSVTDARLCFERHA-TSKIRQAEDLFD---LHTKGFRGEALASIAAIAHVEMKTKQDQEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G +++GSK ++ D GT+ + ++LF+N P RR +++S ++ H + +
Sbjct: 121 LGTHIIIEGSK--FVSQDVAVLPKGTSFLVKNLFFNIPARRNFLKSDIVELRHIIDEF-Q 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL H + F F SE L S+ +++ F + L + N L I
Sbjct: 178 RVALAHHNIHFTFYHNGSE---LFNLPQSNVRQRIVNIFSGKTNEKLVPIQENTDILSIQ 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+I P + K Q+ ++N R++ G +H + A G L+
Sbjct: 235 GFIGKPEFAKKSKGEQFFFVNDRFIKSGYLHHAI------------MNAYEGLLRDG--- 279
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
A P+Y L L P D+ P KT + F D + + A + A +
Sbjct: 280 --AQPSYFLYLDVPPHTIDINIHPTKTEIKFDDEQALYAILRSATK 323
>gi|50122856|ref|YP_052023.1| DNA mismatch repair protein [Pectobacterium atrosepticum SCRI1043]
gi|81827002|sp|Q6D065.1|MUTL_ERWCT RecName: Full=DNA mismatch repair protein MutL
gi|49613382|emb|CAG76833.1| DNA mismatch repair protein [Pectobacterium atrosepticum SCRI1043]
Length = 651
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 174/359 (48%), Gaps = 33/359 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHA-TSKI---ATLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 238
RIAL V+ I + +L+ ++ G I +FL V+ G
Sbjct: 177 RIALARFDVA---ITLHHNGKLMRQYRAAPDKNQYERRLGSICGATFLQHALAVSWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P + + QY Y+N R + +L+NH A +
Sbjct: 234 LTIHGWVADPVGAKQLPDMQYCYVNQRMMRD----RLINH------------AIRQAYQD 277
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
+ S Q PAY+L L PH + D+ P K V F V FI +A+ S + A
Sbjct: 278 QLSDEQQ-PAYVLYLEIDPHQV-DVNVHPAKQEVRFHQARLVHDFIYQAVMSVLQQASA 334
>gi|253690084|ref|YP_003019274.1| DNA mismatch repair protein MutL [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259511146|sp|C6DFJ9.1|MUTL_PECCP RecName: Full=DNA mismatch repair protein MutL
gi|251756662|gb|ACT14738.1| DNA mismatch repair protein MutL [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 669
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 175/359 (48%), Gaps = 33/359 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHA-TSKI---ATLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 238
RIAL V+ I + +L+ ++ + G I +FL V+ G
Sbjct: 177 RIALARFDVA---ITLHHNGKLIRQYRAAPDKSQYERRLGNICGATFLQHALAVSWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P + + QY Y+N R + +L+NH A +
Sbjct: 234 LTIHGWVADPVGAKQLPDMQYCYVNQRMMRD----RLINH------------AIRQAYQD 277
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
+ S Q PAY+L L PH + D+ P K V F V FI +A+ S + A
Sbjct: 278 QLSDDQQ-PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMSVLQQASA 334
>gi|295133314|ref|YP_003583990.1| DNA mismatch repair protein MutL [Zunongwangia profunda SM-A87]
gi|294981329|gb|ADF51794.1| DNA mismatch repair protein MutL [Zunongwangia profunda SM-A87]
Length = 619
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 196/415 (47%), Gaps = 44/415 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ V++EL+ N++DA A + V V +++VDDG+G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVIKELLENAIDAYAHNIQVVVKDAGKTLIQIVDDGAG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ +D + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSLTDARMCFERHA-TSKI---KSAEDLFSLNTKGFRGEALASIAAIAHVELKTKPQNEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G ++GSK + + V GT++ ++LFYN P RR +++S ++ H + +
Sbjct: 121 VGTCIKIEGSK-----VTSQEPCVTPKGTSLCVKNLFYNIPARRNFLKSDAVELRHIIDE 175
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
R+A+ HP ++F E L S++ + + FG + L VN + +
Sbjct: 176 -FQRVAMAHPSIAFSLFHNGGE---LFQLPSTNHRQRITNIFGAKTNEKLVPVNEDTEIV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKG 298
+ISG++ P + + Q+ ++N+R++ K P LNH ++A+FD G LK
Sbjct: 232 KISGFVGKPEFAKRSRGEQFFFVNNRFI-KSP---YLNHAVSAAFD---------GLLKE 278
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
K P+Y L L D+ P KT + F D + A + AI+ + +
Sbjct: 279 K-----TYPSYFLYLDVNPKSIDINIHPTKTEIKFDDEHALYAMLRSAIKHSLGQFSVAP 333
Query: 359 SFDVDMLEDAELPLESSRFQSHQSSTHLHSS--PLKN------LAKQRDHMFHKE 405
D D + + P E Q+ + S P +N + + H F KE
Sbjct: 334 VLDFDRDANLDTPYEYKNRQAQVPKIEVDRSFNPFENELNTSSIRSGKSHNFRKE 388
>gi|270295718|ref|ZP_06201918.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273122|gb|EFA18984.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 638
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 186/380 (48%), Gaps = 39/380 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ VV+ELV N++DA A ++ V + ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVVKELVENAIDAEAEEIHVLITDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREAADL---FALRTMGFRGEALASIAAVAEVELKTRPASEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G R ++ GSK G + G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRLLIAGSKV--EGQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILTEFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALVHP+V+F + S D L +++ FG + L V+ N ++IS
Sbjct: 178 RIALVHPEVAFY---LYSNDTELFNLPVMPLRQRIMAVFGKKLNQQLLSVDVNTTMIKIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+++ P S A QY ++N RY+ HK + D+++
Sbjct: 235 GFVAKPETSRKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE------------ 273
Query: 303 SQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
Q PA Y + + D+ P KT + F++ + + + A++ + K A
Sbjct: 274 -QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGKFSAI 332
Query: 358 DSFDVDMLEDAELP-LESSR 376
+ D D + ++P E +R
Sbjct: 333 PTIDFDTEDMPDIPAFEQAR 352
>gi|255690560|ref|ZP_05414235.1| DNA mismatch repair protein MutL [Bacteroides finegoldii DSM 17565]
gi|260624021|gb|EEX46892.1| DNA mismatch repair domain protein [Bacteroides finegoldii DSM
17565]
Length = 633
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 187/401 (46%), Gaps = 48/401 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ VV+ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVVKELVENAIDAEAQNIHVLVTDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + V+ GS + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKLVIAGSTV------ESQEAVSCSKGSNFSIKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L S +++ FG + L + N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSE---LFNLPVSPLRQRIMAIFGKKLNQQLLNIEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 231 VKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------------------- 268
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ Q PA Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 269 MEAYEQLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS--SPLK 392
A S D D + ++P S H +S +P K
Sbjct: 329 FSAIPSIDFDTEDMPDIPAFEQSTSSEPPKVHYNSDYNPFK 369
>gi|322436381|ref|YP_004218593.1| DNA mismatch repair protein MutL [Granulicella tundricola MP5ACTX9]
gi|321164108|gb|ADW69813.1| DNA mismatch repair protein MutL [Granulicella tundricola MP5ACTX9]
Length = 659
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 176/385 (45%), Gaps = 51/385 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I L + V N + +G V+ VV+EL+ NS+DAGAT++ + V +++VD+
Sbjct: 1 MGRIRILSDQVANQIAAGEVVERPASVVKELLENSLDAGATRIRIEVEAGGRKLIRIVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ +D +L ERHA TSKL DD I T GFRGEAL SI+ V+ L + T+A
Sbjct: 61 GHGMGKDDALLAFERHA-TSKL---RTSDDLLSIATLGFRGEALPSIASVARLSLETRAA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G + G L ++D +GTT+ RDLF+N P RRK+++S ++ H +
Sbjct: 117 EDDSGTHIEIAGGNILT--VEDAGLPIGTTIAIRDLFFNTPARRKFLKSESTELSH-IAA 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSP------------LALLISSFGIEDFS 227
V AL H F+ + LL + +S AL+I + DF+
Sbjct: 174 LVTHYALAHFNRHFEL--HSTTQALLVAPAVASAGDRLFQIFGRDTAALMIPTTAEMDFT 231
Query: 228 F------------LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKL 275
LD + G L ISG++S P + YV++N R + +L
Sbjct: 232 RAGLPEPPPWKRELDYEAPDPGFLRISGFVSKPELQKLNRNSVYVFVNQRLIRD----RL 287
Query: 276 LNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD 335
+ H +++++ + P LL L P D+ P KT V F+
Sbjct: 288 VLHA-----LTEAYR--------NIIPPSSFPVVLLFLEMPPHEVDVNVHPAKTEVRFRQ 334
Query: 336 WEPVLAFIERAIRSAWMKKIAHDSF 360
V FI +R+ M+ SF
Sbjct: 335 PAFVHDFIRDTVRTTLMQARPAASF 359
>gi|160890581|ref|ZP_02071584.1| hypothetical protein BACUNI_03024 [Bacteroides uniformis ATCC 8492]
gi|317479877|ref|ZP_07938994.1| DNA mismatch repair protein MutL [Bacteroides sp. 4_1_36]
gi|156859580|gb|EDO53011.1| DNA mismatch repair domain protein [Bacteroides uniformis ATCC
8492]
gi|316903951|gb|EFV25788.1| DNA mismatch repair protein MutL [Bacteroides sp. 4_1_36]
Length = 638
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 186/380 (48%), Gaps = 39/380 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ VV+ELV N++DA A ++ V + ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVVKELVENAIDAEAEEIHVLITDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREAADL---FALRTMGFRGEALASIAAVAEVELKTRPASEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G R ++ GSK G + G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRLLIAGSKV--EGQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILTEFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALVHP+V+F + S D L +++ FG + L V+ N ++IS
Sbjct: 178 RIALVHPEVAFY---LYSNDTELFNLPVMPLRQRIMAVFGKKLNQQLLSVDVNTTMIKIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+++ P S A QY ++N RY+ HK + D+++
Sbjct: 235 GFVAKPETSRKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE------------ 273
Query: 303 SQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
Q PA Y + + D+ P KT + F++ + + + A++ + K A
Sbjct: 274 -QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGKFSAI 332
Query: 358 DSFDVDMLEDAELP-LESSR 376
+ D D + ++P E +R
Sbjct: 333 PTIDFDTEDMPDIPAFEQAR 352
>gi|365154966|ref|ZP_09351362.1| DNA mismatch repair protein MutL [Bacillus smithii 7_3_47FAA]
gi|363628891|gb|EHL79592.1| DNA mismatch repair protein MutL [Bacillus smithii 7_3_47FAA]
Length = 631
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 219/482 (45%), Gaps = 50/482 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I +L + + N + +G V+ VV+ELV N++DA +T + + V ++VVD+
Sbjct: 1 MGKIIQLDDMLSNKIAAGEVVERPASVVKELVENAIDAHSTVIEIDVEEAGLQSIRVVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE IT
Sbjct: 61 GDGIEEEDVLTAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSYLE-ITTGT 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R V++G K + RK GT V+ +LFYN P R KYM++ + L ++
Sbjct: 116 GEGAATRAVLEGGKVVRKEKASARK--GTEVIVSNLFYNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP VS + + LL T + +L + +G+ + ++A
Sbjct: 173 TVNRLALAHPDVSIQL--RHNGRVLLETNGNGDARQVLAAIYGLNTAKKMIPISARSIDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
EI G+IS P + + + + IN RYV P+ K + + + L
Sbjct: 231 EIEGWISLPELTRASRNYISTIINGRYVKNYPLVKAIQ------------EGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
R P L+ ++ L D+ P K V + + + + I+ A+ K
Sbjct: 279 R-----YPIALVMIQMDPLLVDVNVHPSKLEVRLSKEQELNELMMKTIQEAFRSKRL--- 330
Query: 360 FDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHM------FHKECERI-TFQ 412
+PLE++ + + T S L +L KQ + + H+ E T++
Sbjct: 331 ----------IPLENAAPKWKKEKTVQQSFELDHLPKQTEPIIDTAVPIHRPPELTNTYE 380
Query: 413 EFQKDPVELAEENTEMEFFSQPKHSSSLL-DGSFAECLPIVPPKIDHRVWTIESSWFQDH 471
+ Q++ L E+ E E S+PK S + + E +V D + T ESS Q
Sbjct: 381 KHQEEERHLPEDMLEQE-QSEPKSSPDFVREYDVQESETVVEAADDSSLETTESSQRQSR 439
Query: 472 QP 473
P
Sbjct: 440 IP 441
>gi|402846663|ref|ZP_10894972.1| DNA mismatch repair protein, C-terminal domain protein
[Porphyromonas sp. oral taxon 279 str. F0450]
gi|402267355|gb|EJU16750.1| DNA mismatch repair protein, C-terminal domain protein
[Porphyromonas sp. oral taxon 279 str. F0450]
Length = 637
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 176/381 (46%), Gaps = 40/381 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LPE++ N + +G V+ +V+ELV NS+DAGA ++ + VG + V DDG G
Sbjct: 5 IRLLPESIANQIAAGEVVPAPAYLVKELVENSIDAGAKQIQIEVVGAGRQSISVTDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSKL +DD + T GFRGEALA+I+ V +E+ T+ +
Sbjct: 65 MSPTDARMAFERHA-TSKL---QTIDDLQHLSTMGFRGEALAAIAAVCQVELRTRTADQE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV------GTTVVSRDLFYNQPVRRKYMQSSPKKV-LH 175
G +++G+K R + GT++ + ++FYN P RRK++++ + L
Sbjct: 121 LGTELIIEGAKV--------RSQMPVACSPGTSLKAMNIFYNTPGRRKHLEARKESTELM 172
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
+ + ++AL +P++SF D++L +SS +I G + L V+
Sbjct: 173 EIWREFAKVALANPQISFTLRGAGKYDKIL---PASSLKERIIDIGGAKLSRALIPVSYE 229
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
I G+I +P S+ A QY+++N R++ HK A S + A N
Sbjct: 230 SAFCTIRGFIGTPTTSLKQGAQQYLFVNDRFIRHPYFHK-----AISLAYENFIPAGN-- 282
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
P Y L P D+ P KT V F D + ++ IR A+
Sbjct: 283 ----------QPQYFLYFTIPAENIDVNIHPQKTDVRFLDESTIFQVLQSLIRDAFSSHA 332
Query: 356 AHDSFDVDMLEDAELPLESSR 376
D + E+P S R
Sbjct: 333 LTPIIDFENASPIEIPAYSGR 353
>gi|423367755|ref|ZP_17345187.1| DNA mismatch repair protein mutL [Bacillus cereus VD142]
gi|401083408|gb|EJP91666.1| DNA mismatch repair protein mutL [Bacillus cereus VD142]
Length = 381
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 172/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + ++ ERHA TSK+ D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHA-TSKI---KDENDLFRIRTLGFRGEALPSIASVSELELITSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 117 DAP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 173 IVYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RYV + K + + + L
Sbjct: 231 TIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 279 R-----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|406662984|ref|ZP_11071063.1| DNA mismatch repair protein mutL [Cecembia lonarensis LW9]
gi|405552998|gb|EKB48317.1| DNA mismatch repair protein mutL [Cecembia lonarensis LW9]
Length = 627
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 173/353 (49%), Gaps = 37/353 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+A+ N + +G V+ ++EL+ N++DAGAT+V V V ++V+D+G G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASALKELMENAIDAGATQVQVLVKEAGKMLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERH ATSK + +D I TFGFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSMTDARMSFERH-ATSK---IRTSEDLFAIRTFGFRGEALASIAAVAQVEMRTREKDAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G ++GS D ++++ GT ++ ++LF+N P RR +++S+P ++ H V
Sbjct: 121 LGTLIQVEGS-------DVKKQEPVSCMEGTQILVKNLFFNVPARRNFLKSNPVEMRHLV 173
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
++ R+AL +P+V F +++ EL + +I FG L
Sbjct: 174 EE-FQRVALAYPEVGFSL--KQNDMELFNLPAGGKLSQRIIGIFGKSYQGQLVVCQEETP 230
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
L + GY+ P + + QY ++N+R++ +H H A+ A G +
Sbjct: 231 HLNVKGYVGKPEQAKKTRGEQYFFVNNRFIKSNYLH----HAVAN--------AYEGLM- 277
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
S P Y+L L + D+ P KT + F D V A + A++ A
Sbjct: 278 ----PSDMHPFYVLFLEIDPTHIDINVHPTKTEIKFDDERTVYAVVRSAVKQA 326
>gi|283834788|ref|ZP_06354529.1| DNA mismatch repair protein MutL [Citrobacter youngae ATCC 29220]
gi|291069034|gb|EFE07143.1| DNA mismatch repair protein MutL [Citrobacter youngae ATCC 29220]
Length = 617
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 173/369 (46%), Gaps = 54/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQP 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + +
Sbjct: 119 EAWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNH-IDEIIR 176
Query: 183 RIALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ D + E L C +S L + IE
Sbjct: 177 RIALARFDVTINLSHNGKVVRQYRAVAADGQKERRLGAICGTS----FLEHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLRGWVADPNHTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKI 355
+ S +++
Sbjct: 326 VLSVLQQQL 334
>gi|392396268|ref|YP_006432869.1| DNA mismatch repair protein MutL [Flexibacter litoralis DSM 6794]
gi|390527346|gb|AFM03076.1| DNA mismatch repair protein MutL [Flexibacter litoralis DSM 6794]
Length = 704
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 172/352 (48%), Gaps = 30/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDD 59
+ I LPE++ N + +G V+ VV+E++ NSVDA AT + V ++V+D+
Sbjct: 2 LDIIRLLPESLANQIAAGEVVQRPASVVKEMLENSVDAEATTIELVLKDAGKILIQVIDN 61
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + ERHA TSK+ + DD I TFGFRGEA+AS++ V+ +E+ TK
Sbjct: 62 GKGMSETDARMCFERHA-TSKI---IEPDDLYNILTFGFRGEAMASVAAVAQVELRTKQE 117
Query: 120 GRPNGYRKVMKGSKC-LYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
+ G ++GS+ + I ++ GT++ ++LF+N P RRK+++S+ ++ H +
Sbjct: 118 DQEIGTFIYIEGSEVKKHEPIATQK---GTSLAVKNLFFNTPARRKFLKSNSVELRH-IT 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ R+AL +P ++F M + + +++ FG S L +
Sbjct: 174 QEFERVALANPHINF---SMHHNGQEIYNLREGKLARRIVAMFGKSYQSNLLTCQEDVET 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++ GY+ P + K QY ++N+R++ G +H + A G L
Sbjct: 231 IKLLGYVGKPQAAKKTKGSQYFFVNNRFIKSGYLHHAV------------MTAYEGLL-- 276
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
A P Y+L + D+ P KT + F D V ++ A++ A
Sbjct: 277 ---PKDAHPFYVLFIEIDPKKIDINVHPTKTEIKFDDERTVYVVVQSAVKQA 325
>gi|423301606|ref|ZP_17279629.1| DNA mismatch repair protein mutL [Bacteroides finegoldii
CL09T03C10]
gi|408471599|gb|EKJ90130.1| DNA mismatch repair protein mutL [Bacteroides finegoldii
CL09T03C10]
Length = 633
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 187/401 (46%), Gaps = 48/401 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ VV+ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVVKELVENAIDAEAQNIHVLVTDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + V+ GS + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKLVIAGSTV------ESQETVSCSKGSNFSIKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F +SE L S +++ FG + L + N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSE---LFNLPVSPLRQRIMAIFGKKLNQQLLNIEVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 231 VKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------------------- 268
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ Q PA Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 269 MEAYEQLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS--SPLK 392
A S D D + ++P S H +S +P K
Sbjct: 329 FSAIPSIDFDTEDMPDIPAFEQSTSSEPPKVHYNSDYNPFK 369
>gi|332291112|ref|YP_004429721.1| DNA mismatch repair protein MutL [Krokinobacter sp. 4H-3-7-5]
gi|332169198|gb|AEE18453.1| DNA mismatch repair protein MutL [Krokinobacter sp. 4H-3-7-5]
Length = 624
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 170/347 (48%), Gaps = 30/347 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGA+ + + V ++++DDG G
Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASTIKLIVKDAGKTLIQIIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ DD + T GFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSDTDARMSFERHA-TSKI---TTADDLFNLNTKGFRGEALASIAAVAHVELKTRPEGAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G R ++GSK + K GT++ ++LF+N P RR +++S+ ++ H + +
Sbjct: 121 VGTRIEIEGSKINAQEVCATPK--GTSLSVKNLFFNIPARRNFLKSNSVELRHVIDEF-Q 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R++L HP ++F E E L + +++ FG + L V L I
Sbjct: 178 RVSLAHPDIAFAMYHNEGE---LFQLPQGNLKQRIVAIFGGKTNEKLVPVQEETDILTID 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKRS 301
G++ P S + Q+ ++N R++ LNH + A+FD G L
Sbjct: 235 GFVVKPEFSKKTRGEQFFFVNDRFIKSA----YLNHAVTAAFD---------GLL----- 276
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+A +Y L L+ S D+ P KT + F D + A + I+
Sbjct: 277 PERARASYFLYLKVDPSTIDINIHPTKTEIKFDDEHALYAMLRSTIK 323
>gi|307132706|ref|YP_003884722.1| methyl-directed mismatch repair protein [Dickeya dadantii 3937]
gi|306530235|gb|ADN00166.1| methyl-directed mismatch repair protein [Dickeya dadantii 3937]
Length = 646
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 170/350 (48%), Gaps = 33/350 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKADLALALARHA-TSKI---ATLDDLEAIVSLGFRGEALASISSVSRLTLTSRTDAQE 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK++++ + +H + + V
Sbjct: 119 EAWQAYAEGRE-MAVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFMH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 238
RIAL V+ I + +L+ + S A G I +FL V+ G
Sbjct: 177 RIALARFDVA---ITLHHNGKLIRQYRAVSDPAQRERRLGSICGAAFLQHALAVSWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S + QY Y+N R + +L+NH +
Sbjct: 234 LNIHGWVADPAGSRQLPEMQYCYVNQRMMRD----RLINH-----------AIRQAYQDQ 278
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
R + Q PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 279 LRDEQQ--PAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|373461480|ref|ZP_09553220.1| DNA mismatch repair protein MutL [Prevotella maculosa OT 289]
gi|371952438|gb|EHO70277.1| DNA mismatch repair protein MutL [Prevotella maculosa OT 289]
Length = 610
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 167/348 (47%), Gaps = 28/348 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV N+VDAGA + V V ++V+DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENAVDAGAKNIRVQVIDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK + DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERH-ATSK---IRKADDLFALHTMGFRGEALASIAAVAQVELRTRQEKDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + + GS+ + G + VG+ +LFYN P RRK+++S+ + L+++
Sbjct: 121 VGTQLFIAGSR--FTGQEPCSCPVGSNFSINNLFYNVPARRKFLKSNATE-LNNIIAAFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+P ++F + S L + +I FG L +V + I+
Sbjct: 178 RIALVYPDIAF---SLHSNGTELFNLKAGLLRQRIIDIFGKRLNQDLLQVKVDTTMCRIN 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GY+ P + A QY ++N RY+ HK + N F + S
Sbjct: 235 GYVGKPQSARKKGAHQYFFVNGRYMKHPYFHKAV---------------TNAFERLVPSG 279
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
Q P +L P + D+ P KT + F++ P+ + A++ A
Sbjct: 280 EQ-IPYFLYFEVAPEDI-DVNIHPTKTEIKFENEVPIWQVLSAAVKEA 325
>gi|338210342|ref|YP_004654391.1| DNA mismatch repair protein mutL [Runella slithyformis DSM 19594]
gi|336304157|gb|AEI47259.1| DNA mismatch repair protein mutL [Runella slithyformis DSM 19594]
Length = 629
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 208/451 (46%), Gaps = 53/451 (11%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
I LP+A+ N + +G V+ VV+EL+ NS+DA A + V + ++++DDG
Sbjct: 4 VIRLLPDAIANQIAAGEVVQRPASVVKELLENSIDAQAKNIQVIIRDAGRTLIQIIDDGG 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+S + ERHA TSK+ H DD I T GFRGEALASI+ V+ +E+ T+
Sbjct: 64 GMSETDARMSFERHA-TSKIRH---ADDLFRIRTMGFRGEALASIAAVAQIEMRTRRPSD 119
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G M+GS+ ++ V GT ++ ++LF+N P RR +++++ ++ H +
Sbjct: 120 EIGILLRMEGSEL------KSQESVACLPGTNILVKNLFFNVPARRNFLKTNSVEMRHIL 173
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R+AL HP++SF ++E L + S ++ FG L +
Sbjct: 174 DE-FQRVALAHPEISFSLYHNDTEVYNLYSGKLSR---RIVDMFGKNYREQLIQCQEETP 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFL 296
+ + G++ P + + Q+ ++N RYV H L+H + A+++ + S ++
Sbjct: 230 YVTVKGFVGKPDFARKTRGEQFFFVNDRYVK----HNYLHHAVLAAYEATISEGSH---- 281
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
P Y+L L S D+ P KT + F D V A + AIR A I
Sbjct: 282 ----------PFYVLMLDIDPSHIDINIHPTKTEIKFDDERSVYALLMAAIRKAI--SIN 329
Query: 357 HDSFDVDMLEDAELPLESSRFQSHQSSTHLHS-------------SPLKNLAKQRDHMFH 403
H S +D + S + ++T S PL + ++ ++ H
Sbjct: 330 HLSHSIDFEANVNFLNPMSGLGNRSAATTGTSPKPQSVNWDLPSHPPLPSSRREETNLSH 389
Query: 404 KECERITFQEFQKDPVELAEENTEMEFFSQP 434
E FQ+ + PV+ + E E FS+P
Sbjct: 390 WEKLFDGFQKPEPAPVQATLDLRETEDFSEP 420
>gi|373106357|ref|ZP_09520660.1| DNA mismatch repair protein MutL [Stomatobaculum longum]
gi|371652732|gb|EHO18140.1| DNA mismatch repair protein MutL [Stomatobaculum longum]
Length = 651
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 170/354 (48%), Gaps = 31/354 (8%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVVDD 59
+I L E+ N + +G V+ +V+EL N++DA A+ + + + G+ ++V D+
Sbjct: 2 SIQLLDESTINKIAAGEVIERPASIVKELAENAIDADASVITIEIRDGGIA--MIRVTDN 59
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI+ D + RHA TSK+ +D + + GFRGEALASI+ V+ +E+ITK
Sbjct: 60 GSGIAADEVPTAFLRHA-TSKI---RTAEDIYHVQSLGFRGEALASIAAVARIELITKRR 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R +G + L ++ GTTV++RDLF+N PVRR +++++ + H V
Sbjct: 116 DALTGVRYTAEGGQQTAL--EEIGAPAGTTVIARDLFFNTPVRRGFLKAAVTETAH-VAA 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+AL HP+VS +F + + T + ++ +G E + L V + L
Sbjct: 173 LAEELALSHPEVSIRF--LANGQSRFHTSGNREVKDIIYQLYGREIATKLLPVEREEKGL 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ G+I P S +A ++ IN RY+ K P+ S +G+ G
Sbjct: 231 SVHGFIGRPEISRGSRALEHYCINGRYI-KSPLL--------------SKAIEDGY--GD 273
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P +L L + D+ P K V F D + + F+ A+ A +
Sbjct: 274 RMMQHNFPFAVLFLTTKPEVVDVNVHPTKREVRFSDGQALYLFLRAAVEEALQR 327
>gi|365135103|ref|ZP_09343628.1| DNA mismatch repair protein MutL [Subdoligranulum sp. 4_3_54A2FAA]
gi|363613073|gb|EHL64597.1| DNA mismatch repair protein MutL [Subdoligranulum sp. 4_3_54A2FAA]
Length = 695
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 175/354 (49%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I+ L + + +G V+ VV+EL N++DAGAT V V V G+ +++
Sbjct: 1 MAVIHVLDKHTAELIAAGEVVERPASVVKELTENAIDAGATAVSVSVERGGIA--MIQIA 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI + + RHA TSK+ D++ I T GFRGEALAS++ VS +E++TK
Sbjct: 59 DNGCGIEAEYIPTAFIRHA-TSKIEKEEDLES---IHTLGFRGEALASVASVSRIELLTK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
Y + G + GI+ + VGTT+ RDLFYN P R K+++ + + V
Sbjct: 115 TDADEYAYLYRISGGE--EQGIEPAARPVGTTITVRDLFYNTPARMKFLKKDTSE-GNYV 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGI--EDFSF-LDEVNA 234
V ++AL HP+VSFKF+ + + + LL +++ + DF+ L V
Sbjct: 172 ADVVTQLALSHPEVSFKFV-RDGKPQFQTPGDGK----LLGAAYAVLSRDFAKDLVPVEH 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
G+ + G ++ P + + +A QY +IN R+V ++ L A++
Sbjct: 227 TAGSYTVRGLVTPPKSARASRAMQYFFINGRFVKN---RTMMAALEAAY--------KGV 275
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
++GK P +L++ P L D+ P KT V F + V + ++++
Sbjct: 276 MMQGK------FPGCVLSIEMPPQLVDVNVHPAKTEVRFAREKDVFDAVYQSVK 323
>gi|251788130|ref|YP_003002851.1| DNA mismatch repair protein [Dickeya zeae Ech1591]
gi|247536751|gb|ACT05372.1| DNA mismatch repair protein MutL [Dickeya zeae Ech1591]
Length = 649
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 170/350 (48%), Gaps = 33/350 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKADLALALARHA-TSKI---ATLDDLEAIVSLGFRGEALASISSVSRLTLTSRTEAQA 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK++++ + +H + + V
Sbjct: 119 EAWQAYAEGRE-MAVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFMH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 238
RIAL V+ I + +L+ + S A G I +FL V+ G
Sbjct: 177 RIALARFDVA---ITLHHNGKLIRQYRAVSEPAQRERRLGSICGAAFLQHALAVSWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S + QY Y+N R + +L+NH +
Sbjct: 234 LNIHGWVADPVGSRQLPEMQYCYVNQRMMRD----RLINH-----------AIRQAYQDQ 278
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
R + Q PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 279 LRDEQQ--PAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|225027642|ref|ZP_03716834.1| hypothetical protein EUBHAL_01901 [Eubacterium hallii DSM 3353]
gi|224954956|gb|EEG36165.1| DNA mismatch repair domain protein [Eubacterium hallii DSM 3353]
Length = 731
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 202/409 (49%), Gaps = 36/409 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I L ++ N + +G V+ + +V+ELV N+VDA +T V V + G ++++ D+
Sbjct: 1 MPEIRVLDQSTINQIAAGEVVERPSSIVKELVENAVDANSTAVTVEIKGGGIDFIRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI ++ + HA TSK+ +D++ + GFRGEAL+SI+ V+ +E++TK
Sbjct: 61 GCGIEKEQVRKAFLPHA-TSKIRSASDLETVV---SLGFRGEALSSIASVAKVELVTKTD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G R V++G + D+ GTT + R+LF+N P RRK+++S + + V+
Sbjct: 117 EGISGIRYVIEGGE--EKSYDEIGCPEGTTFIIRNLFFNTPARRKFLKSKMTEAGY-VES 173
Query: 180 CVLRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ R+AL HP +SFKFI D +++ + T + + ++ + FG + L V N+
Sbjct: 174 FIQRLALSHPDISFKFICDNKNK---ISTSGNGNLKDVIYNIFGRDVAMNLLPVKGNENG 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ + GYI P S + ++ ++N RY+ I K + + +K +
Sbjct: 231 ILVDGYIGKPVISRGNRNYENYFVNGRYLKNNIISKAI---------EEGYKGH------ 275
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK---- 354
+ P L + +D P K + F++ E + + + A+RS+++KK
Sbjct: 276 --AMVHKFPFTALMISMDPHCFDANVHPAKMEMRFRNAEELYSSVMSAVRSSFVKKELIP 333
Query: 355 ---IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDH 400
I +D + + ++ P E R + + L ++ + K+++
Sbjct: 334 KVGIGNDKKEKESVKKIPEPFERKRRAIEERFSSLSQEKIREIEKRKEQ 382
Score = 44.3 bits (103), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 30/203 (14%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
+++ QV + + V L +DQHAA E++ E+L+ + E ++ Q++V P
Sbjct: 544 RIIGQVFRTYWLVEFDEKLFFVDQHAAHEKVMYEKLKKDL---ENNTIV-----QQMVAP 595
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV--NL 1285
+ + F+ + + IC SF K L L + CI GV NL
Sbjct: 596 PV----ILTFSIKEQQKFKIC------EESF-KKLGFLIEEFGGNEY----CIRGVPANL 640
Query: 1286 SDVD----LLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEEL 1341
+D +E Q+ + G R L + AC+ A+ ++ E ++++L
Sbjct: 641 LGIDPQELFIEIFDQIEENSGKMNLEMITDR-LATMACKAAVKGNTAMSYQEMDALMDQL 699
Query: 1342 KQTSLCFQCAHGRPTTVPLVNLE 1364
+ +QC HGRPT + + E
Sbjct: 700 MKLDNPYQCPHGRPTIISMTKYE 722
>gi|429729020|ref|ZP_19263708.1| DNA mismatch repair protein [Peptostreptococcus anaerobius VPI
4330]
gi|429146169|gb|EKX89229.1| DNA mismatch repair protein [Peptostreptococcus anaerobius VPI
4330]
Length = 627
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 175/354 (49%), Gaps = 27/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M IN L ++ N + +G V+ + +++ELV NS+DAG++ + + + ++++D+
Sbjct: 1 MAKINILDDSTINKIAAGEVVERPSSIIKELVENSIDAGSSYISIEIENGGKGLIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI +D + RHA TSK+ + D+ + + + GFRGEALASI+ VS LE++TK
Sbjct: 61 GSGIDKDDVNKAFLRHA-TSKINTVEDL---SSLESLGFRGEALASIAAVSKLEMLTKTE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R V+ G K + + GT + RDLF+N P RRK+++S+ + ++
Sbjct: 117 EALIGLRIVLDGGKIREK--EATSANRGTQISVRDLFFNTPARRKFLKSNQAEA-QAITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +IA+ +P + K+I+ + + T S + + +G + L E++
Sbjct: 174 IVNKIAIGNPSIKIKYIN--NSKTIYETLGDGSIINAIRMIYGRDISENLIEIDYRSKYF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
ISGY+ + + Q++YIN RY+ I K +N D++KA K
Sbjct: 232 SISGYLGNNNIYRGNRNHQHLYINGRYIKSPNISKKIN---------DAYKAIIPINK-- 280
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
P Y +N+ + D+ P K V F E +L + +R +K
Sbjct: 281 ------YPIYFVNISVDPAKVDVNIHPSKLEVKFDQEEEILNELSDFVRGILLK 328
Score = 44.7 bits (104), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 34/186 (18%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIK--- 1242
+ ++DQHAA ERIR E K + D ++++ I L N + ++
Sbjct: 460 MIMLDQHAAHERIRFEMYMSKYKAN--------DISVQMLIDPIIMDLDANDMDTVRKNI 511
Query: 1243 ----DWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLA 1298
+G++ + G RS I++ +P FG S + E + L
Sbjct: 512 DVFSSFGFL--VEEFGHRS--------------ISIRGLPNTFGEPESKRFIYELIDGLG 555
Query: 1299 DTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1358
D T + + AC+ AI D + E ++ +L++ S + C HGRPT V
Sbjct: 556 KIDNIYDTKYDEIAEI---ACKSAIKGNDKISIEEAKHLIGQLEECSNPYTCPHGRPTMV 612
Query: 1359 PLVNLE 1364
+ E
Sbjct: 613 KMTRYE 618
>gi|170728497|ref|YP_001762523.1| DNA mismatch repair protein [Shewanella woodyi ATCC 51908]
gi|238688669|sp|B1KHV0.1|MUTL_SHEWM RecName: Full=DNA mismatch repair protein MutL
gi|169813844|gb|ACA88428.1| DNA mismatch repair protein MutL [Shewanella woodyi ATCC 51908]
Length = 614
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 175/354 (49%), Gaps = 28/354 (7%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI L + N + +G V+ V++ELV NS+DAGAT+V + + +K+ D+GS
Sbjct: 2 TIQILSPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIDKGGSKLIKIQDNGS 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI + L L RHA TSKL L D+D I +FGFRGEALASIS VS L + ++ +
Sbjct: 62 GIPKSELNLALSRHA-TSKLSTLDDLD---AILSFGFRGEALASISSVSRLTLTSRTAEQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++ +GS + + + VGTT+ + DLF+N P RR++++S + H + + +
Sbjct: 118 TEAWQAYAEGSD-MAVKVIPAAHPVGTTIEAVDLFFNTPARRRFLKSDKTEFTH-IDEWL 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFS-FLDEVNANDGALE 240
RIALV P++ F + ++ + ++ ++F+ E++ L
Sbjct: 176 KRIALVKPEIHFTLKHNGKQVRNYRPANNQDQYLMRLAQICGKNFAEQAIEIDCQHEGLT 235
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
+SGYI SP+ + Q+ Y+N R + +L+NH F
Sbjct: 236 LSGYIQSPFFTSPASDTQFFYVNGRLIRD----RLVNH-----------AVRQAF---SE 277
Query: 301 SKSQACPAYLLNLR-CPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ +Y+L L PH + D+ P K V F V +I +A++SA M+
Sbjct: 278 HGTGELASYVLMLEIAPHQV-DVNVHPAKHEVRFHQSRYVHDYILQALQSALMQ 330
>gi|51892886|ref|YP_075577.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
gi|81826108|sp|Q67NL0.1|MUTL_SYMTH RecName: Full=DNA mismatch repair protein MutL
gi|51856575|dbj|BAD40733.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
Length = 635
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 173/352 (49%), Gaps = 29/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I L E N + +G V+ VV+ELV N++DA A ++ V V G V+V DD
Sbjct: 1 MARIRLLDERTANQIAAGEVVERPASVVKELVENALDAQAKRIVVEVSGGGRELVRVTDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ + L +RHA TSK+ D++ I T GFRGEAL SI+ VS E+IT+ H
Sbjct: 61 GIGMVPEDARLALQRHA-TSKIRTAEDLN---AITTLGFRGEALPSIAAVSQFELITRPH 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ GYR + +G + + G + GT V RDLF+N P R KY++++ + L +
Sbjct: 117 DQLAGYRILAEGGQIVAEG--EHGCPAGTRVTVRDLFFNVPARLKYLKTNATE-LAQIGD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL +P+V+F+F + ++ T + A + + G E L V+ + A
Sbjct: 174 ILTRLALANPEVAFRF--QSGQAQVFATPGTGDLTAAVAALLGREMAKELLPVDYRNDAA 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ G++ P + + ++ QY ++N R V +AA + +++ L
Sbjct: 232 RVHGFVGRPTIARAGRSHQYFFVNRRAV---------RTIAARYALEEAYAH---LLPNG 279
Query: 300 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
R P +L + PH + D+ P K V F+ V A + +A R A
Sbjct: 280 R-----YPVCILFIEVEPHEV-DVNVHPTKAEVRFQRDREVRAAVYQAARHA 325
>gi|406026844|ref|YP_006725676.1| DNA mismatch repair protein mutL [Lactobacillus buchneri CD034]
gi|405125333|gb|AFS00094.1| DNA mismatch repair protein mutL [Lactobacillus buchneri CD034]
Length = 643
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 182/377 (48%), Gaps = 43/377 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
+ I++LP + N + +G V+ VV+ELV NS+DA ++++ V V +KVVDD
Sbjct: 4 LNEIHKLPTILSNQIAAGEVVERPASVVKELVENSIDAKSSEIDVTVENSGLKLIKVVDD 63
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G+GI + RHA TSK+ ++ D + T GFRGEAL SIS V+ + + T
Sbjct: 64 GNGIDSSQVQTAFLRHA-TSKI---SEQRDLFRVRTLGFRGEALPSISSVANVRMKTSTG 119
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G KG K + + RK GTTV LFYN P R KY+ SSP L +
Sbjct: 120 SI--GTEVEYKGGKLVTQKASESRK--GTTVEVASLFYNTPARLKYL-SSPNTELSKISD 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP+++F FI + ELL T +L + +G++ S + + ND +
Sbjct: 175 IVNRLALSHPEIAFSFI--SNGRELLRTSGRGDLRQVLGAIYGVKTVSKMAAIKGNDLDI 232
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++SGY+S P + S + + + +N R++ P+ K + A + G
Sbjct: 233 KVSGYVSLPELTRSSRNYISLILNGRFIRNFPLTK---AVIAGY--------------GS 275
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
+ P ++ + +L D+ P K V D EP++ K IA+
Sbjct: 276 KLMIGRFPIAVIKIDADPALIDVNVHPTKQEVRISD-EPMIG-----------KLIANAI 323
Query: 360 FDVDMLEDAELPLESSR 376
+ DML D +L +++R
Sbjct: 324 Y--DMLRDKQLIPDATR 338
>gi|325680314|ref|ZP_08159874.1| DNA mismatch repair protein, C-terminal domain protein
[Ruminococcus albus 8]
gi|324108023|gb|EGC02279.1| DNA mismatch repair protein, C-terminal domain protein
[Ruminococcus albus 8]
Length = 713
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 177/363 (48%), Gaps = 39/363 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I L V + +G V+ VV+EL+ N++DAGAT + V + Y++V D+
Sbjct: 1 MSEIRVLSREVSELIAAGEVIDRPASVVKELLENAIDAGATNITVEIKNGGRTYMRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D L RHA TSK+ D+D I T GFRGEALASI V+ ++++TK
Sbjct: 61 GKGIAPDDLPTAFLRHA-TSKISQKDDLD---SIMTLGFRGEALASICAVAKVDVLTKRK 116
Query: 120 GRPNGYRKVMKGS------KCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
G ++G+ +C G D GTT V RD+FYN P R K+++ +
Sbjct: 117 DDSYGTHYAIEGAEEKTSEQC---GCPD-----GTTFVVRDIFYNVPARLKFLKKDSSEA 168
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 233
H V V ++ L HP +SFK I +++ ELL T + + S +G E + L EV+
Sbjct: 169 NH-VADLVTKLTLSHPDISFKLI-RDNKTELL-TAGDGKIYSAVYSVYGREFANSLIEVD 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+ + G+ P ++ + FQ ++N R+V A + ++++ N
Sbjct: 226 YTWQGIHVHGHAVKPLEAKLNRKFQNFFVNGRFV---------KSKACAAALEEAYR--N 274
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ GK PA +L + P + D+ P K V F D + + + A+++A M+
Sbjct: 275 NIMVGK------FPACVLYIDVPPNTVDVNVHPTKIEVRFSDEKLMHEAVYFAVKNALME 328
Query: 354 KIA 356
+ A
Sbjct: 329 RDA 331
>gi|417301184|ref|ZP_12088353.1| DNA mismatch repair protein MutL [Rhodopirellula baltica WH47]
gi|327542505|gb|EGF28980.1| DNA mismatch repair protein MutL [Rhodopirellula baltica WH47]
Length = 705
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 29/351 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I +LP + N + +G V+ VV+EL+ NS+DAG+T++ + + G +++ DDG G
Sbjct: 15 IRQLPAHLVNQIAAGEVIERPASVVKELLENSIDAGSTRIELSLEGGGVELIRISDDGCG 74
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ + L L HA TSKL D + +GT GFRGEALASI+ VS + I ++A G+
Sbjct: 75 MTAEQLPLAVTSHA-TSKL---PDDESLFHVGTLGFRGEALASIASVSQMTIRSRAEGQD 130
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + ++G G VGT + R+LF+N PVRRK+++ +P+ + +
Sbjct: 131 GGCQIDIRGGVIETPGPCG--CPVGTVIEVRNLFFNTPVRRKFLK-TPQTERGHIVEAFT 187
Query: 183 RIALVHPKVSFKFIDMESED-ELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
R+AL +PKV F + + E +LL T + + S FG E L + D ++I
Sbjct: 188 RLALANPKVHFVLRNGDKEMFDLLPTTRWADRIE---SFFGTEISEALIPIENQDETVQI 244
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
+GY P S QY+++N R++ + L H +A G L R
Sbjct: 245 TGYACDPSVSRGNNRMQYLFLNGRHIRD----RALQHALG--------EAYRGMLMVGRH 292
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
P L +R P + D+ P K V F D V + + + +R ++
Sbjct: 293 -----PVCFLRMRMPADMIDVNVHPAKLEVRFTDSGRVYSRLLQTLRQRFL 338
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 19/189 (10%)
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1231
QV ++++ + VIDQHA ER+ E + KVL + A L+A+Q LV +
Sbjct: 510 QVHQRYLVTQDEKGMVVIDQHALHERVLYERICQKVLHED----ASLEAQQLLVPEPVSL 565
Query: 1232 QLLQNFAE-QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1290
+ A ++KD + + F L+Q + P + N D+
Sbjct: 566 TPAERAAALEVKDTLSRIGLEIE---DFGGETILIQ---------SYPAML-PNKPPADM 612
Query: 1291 LEFLQQLADTDGSSTTPPSVLR-VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQ 1349
L + + G P +L +L++ AC+ A+ GD L P E ++E+
Sbjct: 613 LRTVLESVMGAGRDPNPKDLLNHLLSTVACKAAVKAGDPLSPEEITSLLEQKDLYQETHH 672
Query: 1350 CAHGRPTTV 1358
C HGRPT +
Sbjct: 673 CPHGRPTAL 681
>gi|291528991|emb|CBK94577.1| DNA mismatch repair protein MutL [Eubacterium rectale M104/1]
Length = 648
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 156/289 (53%), Gaps = 20/289 (6%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ VV+ELV N++DAG+T + V + G+ ++++
Sbjct: 1 MPNIAILNQETIDKIAAGEVVERPCSVVKELVENAIDAGSTAITVEIKEGGIS--FIRIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI RD + + RH+ TSK+ +D + + GFRGEAL+SIS V+ +E+ITK
Sbjct: 59 DNGCGIERDQVAVAFYRHS-TSKI---RSAEDLLTVKSLGFRGEALSSISAVARVELITK 114
Query: 118 AHGRPNGYRKVMKGSKCLY---LGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
+ G R V++GSK L +G D GTT + +DLFYN P RRK+++++ +
Sbjct: 115 TYDELTGTRYVIEGSKELSNEEIGAPD-----GTTFIVKDLFYNVPARRKFLKTAQTEGS 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
+ + V ++AL HP +SFKFI+ + L T + + ++ FG E S L EV
Sbjct: 170 Y-ISDMVEKLALSHPDISFKFIN--NNQTKLHTSGNGNRKDIIYHIFGREISSSLLEVKH 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
++ G+I P + + ++ +IN RYV + + + SF
Sbjct: 227 ECEYFKVEGFIGKPVITRGNRNYENYFINGRYVKSNILSRAIEEAYKSF 275
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS---- 1214
+ +S + ++ Q+ K + + L +IDQHAA E++ E+ ++ + + S
Sbjct: 452 LTESAKKQFSIIGQLFKTYWLIEFEDKLYIIDQHAAHEKVLYEKTMARLANKDFTSQRIS 511
Query: 1215 ---VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV 1271
V LDA + ++L+ + QI+ +G+ + G + +
Sbjct: 512 PPIVMTLDARES--------EMLEKYRPQIEQFGY--EVEHFGGKEY------------- 548
Query: 1272 ITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLL 1330
+ A+P +F +++ D+ +E L ++ G T P + + S +C+ A+ D L
Sbjct: 549 -MISAIPDNLFNIDMKDL-FIEMLDDFSNATGRQT-PDIITEKVASMSCKAAVKGNDKLT 605
Query: 1331 PSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
E +++EL + C HGRPT + + E
Sbjct: 606 LPEINKLIDELLSLDNPYNCPHGRPTIISMSKYE 639
>gi|403380641|ref|ZP_10922698.1| DNA mismatch repair protein mutL [Paenibacillus sp. JC66]
Length = 750
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 173/357 (48%), Gaps = 29/357 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L + + N + +G V+ + VV+ELV NS+DAG+T++ V++ ++V D+
Sbjct: 1 MGRIRLLDDHIANQIAAGEVVERPSSVVKELVENSIDAGSTRIEVFLEEGGIQLIRVKDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSG+ + + L RH ATSK+ D+ I + GFRGEAL SI+ V+ +E +T +
Sbjct: 61 GSGMEKSDVQLAFHRH-ATSKISASKDLFR---IRSLGFRGEALPSIAAVAKVECVTSDN 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R V+ G + L ++ GT + R+LFYN P R KYM++ ++ H V
Sbjct: 117 TSGLGTRIVVAGGQV--LAAEEAAASRGTEITVRELFYNTPARLKYMKTIQTELGH-VSD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL HP ++F + + LL T + L ++ + +G + V+
Sbjct: 174 YMYRLALAHPGIAFSL--KHNHNSLLHTLGNGDLLQVIAAVYGTSAAKQMLAVSLETPDY 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCK-GPIHKLLNHLAASFDCSDSWKANNGFLKG 298
ISGYIS P + + + IN RY+ G + LL K + L
Sbjct: 232 TISGYISRPEWTRANRYGISTIINGRYIRNYGLVQALL-------------KGYHTLLPI 278
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
R P +L+L L D+ P K V F +L +E ++R+A +++
Sbjct: 279 NR-----YPLAVLHLEMSPELVDVNVHPAKLEVRFSKEPELLQSVEESVRAALAQEV 330
>gi|365875822|ref|ZP_09415347.1| DNA mismatch repair protein mutl [Elizabethkingia anophelis Ag1]
gi|442587583|ref|ZP_21006399.1| DNA mismatch repair protein [Elizabethkingia anophelis R26]
gi|365756334|gb|EHM98248.1| DNA mismatch repair protein mutl [Elizabethkingia anophelis Ag1]
gi|442562754|gb|ELR79973.1| DNA mismatch repair protein [Elizabethkingia anophelis R26]
Length = 591
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 173/352 (49%), Gaps = 36/352 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ +V+EL+ N++DAGAT + + V V+VVD+GSG
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPASIVKELLENAIDAGATSIELIVKDGGRTLVQVVDNGSG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK + +D I T GFRGEALASI+ V+ +++ TK
Sbjct: 65 MSATDARLAFERH-ATSK---IRTTEDIFRIATKGFRGEALASIAAVAQVDLKTKQADTS 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G ++ G + + E++ V G+ ++LFYN P RRK+++S ++ H +
Sbjct: 121 YGTHIMIHGGELI------EQEPVQSTDGSNFAVKNLFYNVPARRKFLKSDNVEIRHIMD 174
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ R+AL HP + F + +SE + S+ L ++ FG S L +
Sbjct: 175 EF-QRVALAHPGLEFSLYNNDSE---VFRLRKSTELQRIVDIFGRRLHSLLVPIKEETDW 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ +SGY+ P + + Q+ ++N RY K P +L+ + +A G L
Sbjct: 231 VRLSGYVGKPEAARKNRGEQFFFVNGRY-FKSP------YLSRAVQ-----EAFEGLL-- 276
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
+ Q P+Y L L D+ P KT V F+D + A + +I+ +
Sbjct: 277 ---QPQYIPSYFLFLEIDPEKIDVNIHPQKTEVKFEDENVIFAMLRSSIKRS 325
>gi|257094379|ref|YP_003168020.1| DNA mismatch repair protein MutL [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046903|gb|ACV36091.1| DNA mismatch repair protein MutL [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 615
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 175/359 (48%), Gaps = 35/359 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP+ + + + +G V+ V++EL+ N++DAG++ + + + ++V DDG G
Sbjct: 7 IALLPDLLISQIAAGEVVDRPASVLKELLENALDAGSSTIQIQLEEGGVKLLRVSDDGGG 66
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK--AHG 120
++RD L L RHA TSK+ LAD++ +GT GFRGEALAS++ V+ L + ++ +
Sbjct: 67 MARDELALALTRHA-TSKINSLADLER---VGTLGFRGEALASVAAVARLTLTSRQASSD 122
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
R G + + + G GT V RDL+YN P RRK+++S + H +
Sbjct: 123 RAAG-QHAWRLTDEPGAGPQPAALQAGTVVEMRDLYYNTPARRKFLKSEGSEFAHCA-EA 180
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNANDG 237
V RIAL HP V+F + + S+S + + G E FL E ++ + G
Sbjct: 181 VKRIALAHPGVAFT---LSHNGRVALHLSASDSRVRVGAILGDE---FLAESRCLDVSAG 234
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
L ++GY + P S + QY Y+N R+V KLL H +A L
Sbjct: 235 PLRVAGYCALPAYSRARGDAQYCYVNGRFVRD----KLLGHAL--------RQAYQDLLH 282
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
G R PAY L L + D+ P KT V F+D V F+ A++ +A
Sbjct: 283 GSR-----YPAYCLFLDIDPAGVDVNVHPQKTEVRFRDARAVHQFVFHAVQRLLASPLA 336
>gi|238924111|ref|YP_002937627.1| DNA mismatch repair enzyme (putative ATPase) [Eubacterium rectale
ATCC 33656]
gi|259509932|sp|C4ZA52.1|MUTL_EUBR3 RecName: Full=DNA mismatch repair protein MutL
gi|238875786|gb|ACR75493.1| DNA mismatch repair enzyme (predicted ATPase) [Eubacterium rectale
ATCC 33656]
Length = 648
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 156/289 (53%), Gaps = 20/289 (6%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ VV+ELV N++DAG+T + V + G+ ++++
Sbjct: 1 MPNIAILNQETIDKIAAGEVVERPCSVVKELVENAIDAGSTAITVEIKEGGIS--FIRIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI RD + + RH+ TSK+ +D + + GFRGEAL+SIS V+ +E+ITK
Sbjct: 59 DNGCGIERDQVAVAFYRHS-TSKI---RSAEDLLTVKSLGFRGEALSSISAVARVELITK 114
Query: 118 AHGRPNGYRKVMKGSKCLY---LGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
+ G R V++GSK L +G D GTT + +DLFYN P RRK+++++ +
Sbjct: 115 TYDELTGTRYVIEGSKELSNEEIGAPD-----GTTFIVKDLFYNVPARRKFLKTAQTEGS 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
+ + V ++AL HP +SFKFI+ + L T + + ++ FG E S L EV
Sbjct: 170 Y-ISDMVEKLALSHPDISFKFIN--NNQTKLHTSGNGNRKDIIYHIFGREISSSLLEVKH 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
++ G+I P + + ++ +IN RYV + + + SF
Sbjct: 227 ECEYFKVEGFIGKPVITRGNRNYENYFINGRYVKSNILSRAIEEAYKSF 275
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS---- 1214
+ +S + ++ Q+ K + + L +IDQHAA E++ E+ ++ + + S
Sbjct: 452 LTESAKKQFSIIGQLFKTYWLIEFEDKLYIIDQHAAHEKVLYEKTMARLANKDFTSQRIS 511
Query: 1215 ---VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV 1271
V LDA + ++L+ + QI+ +G+ + G + +
Sbjct: 512 PPIVMTLDARE--------CEMLEKYRPQIEQFGY--EVEHFGGKEY------------- 548
Query: 1272 ITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLL 1330
+ A+P +F +++ D+ +E L ++ G T P + + S +C+ A+ D L
Sbjct: 549 -MISAIPDNLFNIDMKDL-FIEMLDDFSNATGRQT-PDIITEKVASMSCKAAVKGNDKLT 605
Query: 1331 PSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
E +++EL + C HGRPT + + E
Sbjct: 606 LPEINKLIDELLSLDNPYNCPHGRPTIISMSKYE 639
>gi|94970246|ref|YP_592294.1| DNA mismatch repair protein MutL [Candidatus Koribacter versatilis
Ellin345]
gi|123256270|sp|Q1ILN0.1|MUTL_KORVE RecName: Full=DNA mismatch repair protein MutL
gi|94552296|gb|ABF42220.1| DNA mismatch repair protein MutL [Candidatus Koribacter versatilis
Ellin345]
Length = 647
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 178/382 (46%), Gaps = 55/382 (14%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
MG I+ L E V N + +G V+ VV+EL+ NS+DAGA ++ V+V + +VDD
Sbjct: 1 MGRIHVLSEHVANKIAAGEVVERPASVVKELIENSLDAGAKRIRVHVEAGGKKLIHIVDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ RD +L ERHA TSKL + +D I T GFRGEAL SI+ V+ + + T+A+
Sbjct: 61 GIGMFRDDAMLAFERHA-TSKLK---NPEDLLSISTLGFRGEALPSIASVARVRLETRAN 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P+G + G K L I++ +GT++ +DLF+N P R+K+++S ++ H +
Sbjct: 117 EEPSGTVLEIAGGKI--LKIEEAGLPLGTSIAIKDLFFNTPARKKFLKSESTELSH-IAS 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFL---------- 229
V AL HP++ ++ + + LL ++ + FG E L
Sbjct: 174 LVTHYALAHPEMHWEL--HSATNALLIAPPVATQSERIYQVFGNETLDQLIPLAAQIKLE 231
Query: 230 ------------------DEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGP 271
+E G + + G+IS P + +V++N R +
Sbjct: 232 RIGLPKPPPWLRKNEDDEEEQTVEPGEVRLHGFISKPEIQKLNRNSIFVFVNGRLIRD-- 289
Query: 272 IHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHV 331
+L+ H +++++ P LL L P++ D+ P KT V
Sbjct: 290 --RLVQH-----ALTEAYR--------NILPPTLFPVVLLFLEMPYTEVDVNVHPSKTEV 334
Query: 332 VFKDWEPVLAFIERAIRSAWMK 353
F+ V F+ ++R+A K
Sbjct: 335 RFRQQSLVHDFVRDSVRAALSK 356
Score = 44.7 bits (104), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 1164 LEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQE 1223
L + L Q+ + FI + L +IDQH A ER+ E KVL + ++ A ++ Q+
Sbjct: 456 LASLRPLGQIRESFILATSNEGLWIIDQHVAHERVLFE----KVL--KQRAAASVET-QQ 508
Query: 1224 LVLPEI-----GYQ-LLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAV 1277
L++P I G Q + AE++ G+ + GSR+F + A
Sbjct: 509 LLMPLIVELTPGQQAVFTEIAEELHQNGF--EVEPFGSRTF--------------AVKAA 552
Query: 1278 PCIFGVNLSDVD--LLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1335
P G+ D++ L E L + + R+ + AC AI L +
Sbjct: 553 PA--GIRAEDIEKTLSEVLDSFEREQQAFNLEHAQSRIAATIACHAAIKVNMPLTQDKME 610
Query: 1336 LIVEELKQTSLCFQCAHGRPTTV 1358
++ EL +T C HGRP +
Sbjct: 611 WLLAELAKTEHPMTCPHGRPIVL 633
>gi|406694730|gb|EKC98052.1| hypothetical protein A1Q2_07598 [Trichosporon asahii var. asahii
CBS 8904]
Length = 799
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 21/361 (5%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC--NCYVKVVD 58
M I RLP +RS V+ + +V+ ELV N++DAGA ++ ++ + N ++V D
Sbjct: 43 MDCIERLPRPTALRLRSSVVVASIPQVLNELVQNALDAGAVRIECWLDLSRGNESIRVED 102
Query: 59 DGSGISRDGLVLLGER-----HAATSKLGHLADMDDATG-IGTFGFRGEALASISDVSLL 112
DG G+ + L +GER ++AT+ L + + G + T+GFRGEALASIS + L+
Sbjct: 103 DGHGLDLEDLRSIGERNSRYCNSATANLPVTSKENHGFGALSTYGFRGEALASISTMGLI 162
Query: 113 EIITKAHGRPNGYRKVMKGSKCLYLGIDDER--KDVGTTVVSRDLFYNQPVRRKYMQSSP 170
+I ++ K++K + LYLG + GT V RDLF+ PVR+ + ++
Sbjct: 163 DITSQV-AEEYTVTKILKSGEALYLGPAKRELGRARGTNVTVRDLFHGVPVRQAELAAAS 221
Query: 171 KKVLHSV-KKCVLRIALVHPKVSFKFIDMESED--ELLCTCSSSSPLALLISSFGIEDFS 227
+ + KK + +ALVHP V + S ++L SS L +G
Sbjct: 222 SSSVLASCKKVIESLALVHPHVRWILWASGSRGMRKVLSLQGCSSTLEAFKELYGAAGVE 281
Query: 228 FLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAAS--FDC 285
+ V+ + G I G+IS + +A Q+++IN + +H+L++ A F
Sbjct: 282 KVQHVSTSAGPRRIDGFIS--LEGAVTRAHQHLFINGYPIENSALHQLISKRFAKSPFGS 339
Query: 286 SDSWKANNGFLKGKR---SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF 342
S ++ + GKR + + P Y+LNL P D +++P K + D++ V F
Sbjct: 340 MASDLMDDALMGGKRPSPRRLERYPVYVLNLTLPADEVDASYEPRKVTFGYHDFDSVQTF 399
Query: 343 I 343
+
Sbjct: 400 L 400
Score = 90.5 bits (223), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 114/257 (44%), Gaps = 36/257 (14%)
Query: 1149 LTGEFFIPD---SINKSCLEDAKVLQQVDKKFIPVV--AGG--TLAVIDQHAADERIRLE 1201
LT PD S + + L++A VL+QVDKKFIP V A G TLA+ DQHAADER LE
Sbjct: 535 LTKTLPGPDVDISFSNASLQNASVLRQVDKKFIPCVLEAEGRKTLAIFDQHAADERASLE 594
Query: 1202 ELRHKVLSGEGKSVAYLDAEQE------LVLPEIGYQLLQNFAEQIKDWGWICNIHTQGS 1255
+ + + A +E L E+ Y ++ WG +
Sbjct: 595 MILESLCKSFAEDTMPTTALEEGTVRVVLSRQEVEYLETPGVRPLLQRWGMRLGLAQPEG 654
Query: 1256 RSFNKNL--------NLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST-- 1305
N+ L ++Q T +T L + + ++ L + DTD S
Sbjct: 655 DYAQVNVYAVPEMLDRLARKQATELTRL-LRLYLPEAADGIGEIQALTEALDTDSESAKS 713
Query: 1306 ---------TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
P +L + SKACRGA+MF D+L +C +V L T + CAHGRPT
Sbjct: 714 NGWKGVVRWMPREMLELAKSKACRGAVMFEDALNQDQCERLVSRLASTRNPWACAHGRPT 773
Query: 1357 TVPLVNL---EALHKQI 1370
VPL + E+ H+ I
Sbjct: 774 VVPLCVIDGAESSHRPI 790
>gi|381150984|ref|ZP_09862853.1| DNA mismatch repair protein MutL [Methylomicrobium album BG8]
gi|380882956|gb|EIC28833.1| DNA mismatch repair protein MutL [Methylomicrobium album BG8]
Length = 609
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 173/351 (49%), Gaps = 35/351 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I+ LP + N + +G V+ + VV+ELV NS DAGA ++ + + ++V DDG G
Sbjct: 3 IHLLPTQLVNQIAAGEVVERPSSVVKELVENSFDAGARQIRIDIEQGGARLIRVRDDGGG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ L L RHA TSK+ LAD++ + + GFRGEAL SIS V+ L +I++ G
Sbjct: 63 IDKEDLPLALSRHA-TSKIATLADLEH---VASMGFRGEALPSISSVARLTLISRTEGSD 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+R G++ + D + D GTTV RDLFYN P RRK+++S + H ++
Sbjct: 119 CAWRVAADGTERDF----DPQPDPHPRGTTVEVRDLFYNTPARRKFLKSEKTEFEH-IQT 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD---EVNAND 236
V R+AL + F+ ++ E+L + +P GI +F+D +++
Sbjct: 174 LVERMALSRFDIGFRL--THNQKEILNLKPAETPAEQEKRIAGICGSAFIDNCVKIDFAS 231
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
LE++G++ P S S Q+ Y+N R + KL+ H +A L
Sbjct: 232 SGLELTGWVGLPTFSRSQPDMQFFYVNGRLIKD----KLVAHAVK--------QAYQDVL 279
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
R P ++L L +L D+ P K V F++ V F+ A+
Sbjct: 280 YHGRQ-----PVFVLYLALDPALVDVNAHPAKLEVRFREGRLVHDFLFSAL 325
Score = 42.7 bits (99), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 21/179 (11%)
Query: 1188 VIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPE--IGYQLLQNFAEQIKDWG 1245
++D HAA ER+ E L+ + G A+Q L+LP + + AEQ ++
Sbjct: 441 LVDAHAAHERVSYERLKKQYEQGAV-------AQQPLLLPIKIVVTSREADIAEQAHEY- 492
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1305
+ + +RS + L L +VP + ++ L + L L++ S
Sbjct: 493 -FAELGLEVNRSGPETL----------VLRSVPALLAGCDAETLLRDVLADLSEHGTSQR 541
Query: 1306 TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
+L + AC G++ L E ++ ++++T QC HGRPT + L E
Sbjct: 542 VQQRTNALLATMACHGSVRAHRRLTVGEMNALLRDMEETERSGQCNHGRPTWIELSTQE 600
>gi|163749345|ref|ZP_02156594.1| DNA mismatch repair protein MutL [Shewanella benthica KT99]
gi|161331064|gb|EDQ01990.1| DNA mismatch repair protein MutL [Shewanella benthica KT99]
Length = 616
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 172/359 (47%), Gaps = 44/359 (12%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ V++ELV NS+DAGAT+V + + +K+ DDG+
Sbjct: 2 TIQILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIKIHDDGT 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI ++ L L RHA TSKL L D+D I +FGFRGEALASIS VS L + ++ +
Sbjct: 62 GIPKEELSLALSRHA-TSKLSTLDDLD---AILSFGFRGEALASISSVSRLTLTSRTAEQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++ +GS + + + VG+TV + DLF+N P RR++++S + H + + +
Sbjct: 118 SEAWQAYAEGSD-MAVKVIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTH-IDEWL 175
Query: 182 LRIALVHPKVSFKFID----------MESEDELLCTCSSSSPLALLISSFGIEDFSFLDE 231
RIALV + F + ++ D+ L + LIS + E
Sbjct: 176 KRIALVRGDIHFTLKNNGKVVRNYRPAKTSDQYLQRLA-------LISGKKFAQQAL--E 226
Query: 232 VNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 291
V L +SGYI PY QY Y+N R V +L+NH A
Sbjct: 227 VKCEHEGLNLSGYIQPPYFEGPASDTQYFYVNGRQVRD----RLVNH------------A 270
Query: 292 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
+ +QA +L L PH + D+ P K V F V FI +A++SA
Sbjct: 271 VRQAFAEHVTGAQASYVLMLELD-PHQV-DVNVHPAKHEVRFHQSRYVHDFILQALQSA 327
>gi|313677400|ref|YP_004055396.1| DNA mismatch repair protein mutl [Marivirga tractuosa DSM 4126]
gi|312944098|gb|ADR23288.1| DNA mismatch repair protein MutL [Marivirga tractuosa DSM 4126]
Length = 615
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 168/349 (48%), Gaps = 28/349 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+A+ N + +G V+ VV+EL+ NS+DAG++K+ V ++V+DDG+G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASVVKELLENSIDAGSSKIKLVVKDAGKQLIQVIDDGAG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERH ATSK+ DD + T GFRGEA+ASI+ V+ +E+ TK
Sbjct: 65 MSETDARMCFERH-ATSKIRK---SDDLFALKTMGFRGEAMASIAAVAQVELKTKTADAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++ S+ +V ++LFYN P RR +++S+P ++ H + +
Sbjct: 121 LGVLLEIEASEIKNQSHTTHTGGTTISV--KNLFYNVPARRNFLKSNPVEMRHIIDE-FH 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL +P+V+F + D + ++ ++ FG L L+I
Sbjct: 178 RVALANPQVAFS---LHQNDMDVYQLNAGKLSQRIVGLFGKNYQEQLVACEETTDQLKIY 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GYI P + + Q+ ++N+RY+ G +H H NGF +G +K
Sbjct: 235 GYIGKPEFAKKTRGEQFFFVNNRYIKSGYLH----HAVV-----------NGF-EGLLAK 278
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+A P Y+L L D+ P KT + F D V + AIR A
Sbjct: 279 -EAHPFYVLCLEIDPKRIDVNVHPTKTEIKFDDERMVYGILAAAIRQAL 326
Score = 44.3 bits (103), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQ-ELVLPEIG 1230
Q+ +K+I L ++DQ AA ERI E+ + + +G S +L EQ +L P+
Sbjct: 435 QIHQKYIATQVKSGLMLVDQQAAHERILFEKFNRHLQNSDGSSQQFLFPEQVQLSAPD-- 492
Query: 1231 YQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF 1281
Y L+ + E++K G++ + SF K+ ++ T +T +V +F
Sbjct: 493 YALVMDMEEELKALGFVIS-------SFGKDTVVINGAPTELTDTSVKSVF 536
>gi|383455898|ref|YP_005369887.1| DNA mismatch repair protein MutL [Corallococcus coralloides DSM
2259]
gi|380733539|gb|AFE09541.1| DNA mismatch repair protein MutL [Corallococcus coralloides DSM
2259]
Length = 625
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 170/359 (47%), Gaps = 33/359 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + + N + +G V+ VV+EL NS+DAGA V V + + + DD
Sbjct: 1 MSRIARLSDVLINKIAAGEVVERPASVVKELCENSLDAGARTVRVELEAGGVGRITISDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+SR+ L ERHA TSKL ++DD I + GFRGEA+ +I+ VS + T
Sbjct: 61 GHGMSREDATLCLERHA-TSKL---RELDDLFHIDSMGFRGEAIPAIASVSRFTLHTAEP 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + ++G + + R VGT + +DLF+N P RRK+M+ ++ H ++
Sbjct: 117 DAHEGTQVTVEGGGPPTVEVAPPR--VGTVITVQDLFFNVPARRKFMRQGATELKH-CEE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V+R+AL HP+V F F E + S P + ++ G F L V +
Sbjct: 174 AVVRLALAHPEVGF-FASHEGNELFSSPASEHDPRERIAAALGPASFPHLFPVEERRLGV 232
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVC-KGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++GY++SP ++ Y ++N RY+ +G I S +A FL
Sbjct: 233 VVTGYLASPEYTLPNARGLYTFVNRRYIRDRGLI-------------STVQRAFQDFLPA 279
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-WM 352
R P +L++ + D+ P K V F D + + A + R +R+A W+
Sbjct: 280 GRQ-----PVVVLHIDVEPAAVDVNVHPQKMEVRFADARGVQDAISAALSRVLRAAPWL 333
>gi|302389748|ref|YP_003825569.1| DNA mismatch repair protein MutL [Thermosediminibacter oceani DSM
16646]
gi|302200376|gb|ADL07946.1| DNA mismatch repair protein MutL [Thermosediminibacter oceani DSM
16646]
Length = 593
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 179/379 (47%), Gaps = 37/379 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
MG I L E + + + +G ++ VV+ELV NS+DAG+ +FV + +KV+DD
Sbjct: 1 MGKIKVLDENISSKIAAGEIIEKPVSVVKELVENSIDAGSRHIFVEIEKGGKSLIKVIDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ + + L ERHA TSK+ L DD I T GFRGEAL SI+ VSLL ++TK H
Sbjct: 61 GEGMDPEDVRLAFERHA-TSKISSL---DDIFNIKTLGFRGEALPSIAAVSLLTVLTKTH 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G + V+ G + ++ G V+ R++F+N P R K++QS ++ V
Sbjct: 117 GSVVGTKCVLNGG--VIEKFEEAAVAEGCCVIVRNIFFNTPARLKFLQSDSREA-SLVVD 173
Query: 180 CVLRIALVHPKVSFKF-IDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
V R A+ HP +SF+ +D + E+L T + + ++ +G L +N
Sbjct: 174 LVTRYAIGHPDISFRLSVDGK---EVLYTPGNGNLKEVIARIYGFNLAKDLIHINKTFDF 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
I G+IS P + ++++ ++N R V L+AS + KA L G
Sbjct: 231 GRIDGFISPPKYTRGNRSWETFFVNGRLVKD-------RGLSASLE-----KAYRTLLPG 278
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
+ P + + SL D+ P K + F+ E + A + +
Sbjct: 279 DK-----FPIAFIKISIDGSLVDVNVHPAKIEIRFQR--------ENEVHQALYETVKEG 325
Query: 359 SFDVDMLEDAELPLESSRF 377
F ++ +LP+ + F
Sbjct: 326 LFSNTLVPKEDLPIPKTTF 344
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 1167 AKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVL 1226
+++L Q+ + +I V G ++DQHAA ERI E G + + QELV
Sbjct: 406 SRILGQLFETYIVVQGNGEFYLVDQHAAHERILYE------YYSCGMDLPVIS--QELVS 457
Query: 1227 PEIGYQLLQ--NFAEQIKDWGWICNIHTQG--SRSFNKNLNLLQRQITVITLLAVPCIFG 1282
P I + NF E+ +D+ I G F K+ L++ +VP F
Sbjct: 458 PFILKLTFEEINFIEENRDF-----IKRMGFDIEVFGKDTVLIR---------SVPYFFN 503
Query: 1283 VNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELK 1342
+ L E + +L + S ++L S AC AI GD+L P E ++++L
Sbjct: 504 KPVEPASLQEIMDELKENGEFRLR--SREKILASMACHTAIKAGDTLSPDEMRELLDQLM 561
Query: 1343 QTSLCFQCAHGRPTTVPLVNLEALHKQIAQLN 1374
+T + C HGRPT + ++L L K+ ++N
Sbjct: 562 RTQNPYTCPHGRPTMIS-ISLYELEKKFRRIN 592
>gi|401885204|gb|EJT49327.1| hypothetical protein A1Q1_01529 [Trichosporon asahii var. asahii
CBS 2479]
Length = 799
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 21/361 (5%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC--NCYVKVVD 58
M I RLP +RS V+ + +V+ ELV N++DAGA ++ ++ + N ++V D
Sbjct: 43 MDCIERLPRPTALRLRSSVVVASIPQVLNELVQNALDAGAVRIECWLDLSRGNESIRVED 102
Query: 59 DGSGISRDGLVLLGER-----HAATSKLGHLADMDDATG-IGTFGFRGEALASISDVSLL 112
DG G+ + L +GER ++AT+ L + + G + T+GFRGEALASIS + L+
Sbjct: 103 DGHGLDLEDLRSIGERNSRYCNSATADLPVTSKENHGFGALSTYGFRGEALASISTMGLI 162
Query: 113 EIITKAHGRPNGYRKVMKGSKCLYLGIDDER--KDVGTTVVSRDLFYNQPVRRKYMQSSP 170
+I ++ K++K + LYLG + GT V RDLF+ PVR+ + ++
Sbjct: 163 DITSQV-AEEYTVTKILKSGEALYLGPAKRELGRARGTNVTVRDLFHGVPVRQAELAAAS 221
Query: 171 KKVLHSV-KKCVLRIALVHPKVSFKFIDMESED--ELLCTCSSSSPLALLISSFGIEDFS 227
+ + KK + +ALVHP V + S ++L SS L +G
Sbjct: 222 SSSVLASCKKVIESLALVHPHVRWILWASGSRGMRKVLSLQGCSSTLEAFKELYGAAGVE 281
Query: 228 FLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAAS--FDC 285
+ V+ + G I G+IS + +A Q+++IN + +H+L++ A F
Sbjct: 282 KVQHVSTSAGPRRIDGFIS--LEGAVTRAHQHLFINGYPIENSALHQLISKRFAKSPFGS 339
Query: 286 SDSWKANNGFLKGKR---SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF 342
S ++ + GKR + + P Y+LNL P D +++P K + D++ V F
Sbjct: 340 MASDLMDDALMGGKRPSPRRLERYPVYVLNLTLPADEVDASYEPRKVTFGYHDFDSVQTF 399
Query: 343 I 343
+
Sbjct: 400 L 400
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 115/258 (44%), Gaps = 38/258 (14%)
Query: 1149 LTGEFFIPD---SINKSCLEDAKVLQQVDKKFIPVV--AGG--TLAVIDQHAADERIRLE 1201
LT PD S + + L++A VL+QVDKKFIP V A G TLA+ DQHAADER LE
Sbjct: 535 LTKTLPGPDVDISFSNASLQNASVLRQVDKKFIPCVLEAEGRKTLAIFDQHAADERASLE 594
Query: 1202 ELRHKVLSGEGKSVAYLDAEQE------LVLPEIGYQLLQNFAEQIKDWGWICNIHTQGS 1255
+ + A +E L E+ Y + WG +
Sbjct: 595 MILESFCKSFAEDTMPTTALEEGTVRVVLSRQEVEYLETPGVRPLLHRWGIRLGLAQPEG 654
Query: 1256 RSFNKNL--------NLLQRQITVITLLAVPCIFGVNLSD-VDLLEFLQQLADTDGSST- 1305
N+ L ++Q T +T L ++ + +D + ++ L DT+ S
Sbjct: 655 DYAQVNVYAVPEMLDRLARKQATELTRLLR--LYLPDAADGIGEIQALTAALDTNSESAK 712
Query: 1306 ----------TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1355
P +L + SKACRGA+MF D+L +C +V L T + CAHGRP
Sbjct: 713 SNGWKGVMRWMPREMLELAKSKACRGAVMFEDALNQDQCERLVSRLASTRNPWACAHGRP 772
Query: 1356 TTVPLVNL---EALHKQI 1370
T VPL + E+ H+ I
Sbjct: 773 TVVPLCVIDGAESSHRPI 790
>gi|299142778|ref|ZP_07035907.1| DNA mismatch repair protein MutL [Prevotella oris C735]
gi|298575807|gb|EFI47684.1| DNA mismatch repair protein MutL [Prevotella oris C735]
Length = 611
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 165/348 (47%), Gaps = 28/348 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ VV+ELV N+VDAGA + V V ++V+DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAVDAGAKNIQVQVIDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK + DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERH-ATSK---IRKADDLFALRTMGFRGEALASIAAVAQVELKTRQEKDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + GS+ ++G + VG + LFYN P RRK+++S+ + L+++
Sbjct: 121 IGTHLSIAGSR--FVGQEPCSCSVGCSFSINSLFYNVPARRKFLKSNSTE-LNNIITAFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+P +SF + S L + +I FG L VN + I+
Sbjct: 178 RIALVYPDISFS---LHSNGTELFNLKAGVLRQRIIDIFGKRLNQELLSVNVDTTMCRIN 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A QY+++N RY+ H N KA +
Sbjct: 235 GFVGKPQSARKKGAHQYLFVNGRYMK----HPYFN------------KAVTAAFERLVPT 278
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
+ P +L P + D+ P KT + F++ P+ + A++ A
Sbjct: 279 GEQVPYFLYFEVAPEDI-DVNIHPTKTEIKFENEVPIWQILSAAVKEA 325
>gi|455644844|gb|EMF23937.1| DNA mismatch repair protein [Citrobacter freundii GTC 09479]
Length = 621
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 173/369 (46%), Gaps = 54/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQP 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ K + + + +
Sbjct: 119 EAWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIR 176
Query: 183 RIALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ D + E L C + L ++ IE
Sbjct: 177 RIALARFDVTINLSHNGKVVRQYRAVAADGQKERRLGAICGTP----FLENALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLRGWVADPNHTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKI 355
+ S +++
Sbjct: 326 VLSVLQQQL 334
>gi|374594325|ref|ZP_09667330.1| DNA mismatch repair protein MutL [Gillisia limnaea DSM 15749]
gi|373872400|gb|EHQ04397.1| DNA mismatch repair protein MutL [Gillisia limnaea DSM 15749]
Length = 614
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 175/348 (50%), Gaps = 30/348 (8%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGS 61
I+ LP+ V N + +G V+ V++EL+ NS+DA A+ + VY+ +++VD+G
Sbjct: 4 VIHLLPDHVANQIAAGEVVQRPASVIKELLENSIDAQASNIQVYIKEAGKILIRIVDNGV 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+S L ERH ATSK + +D + T GFRGEALASI+ ++ +E+ T+
Sbjct: 64 GMSLTDARLSFERH-ATSK---IKSAEDLFSLQTKGFRGEALASIAAIAHVELKTRREED 119
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
G ++GS+ + D GT++ ++LFYN P RR +++S + H + +
Sbjct: 120 EVGTCIRIEGSEI--ISQDACVASSGTSISVKNLFYNIPARRNFLKSDTVETRHIIDEF- 176
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
R++L HP ++F + SE L ++ + + G + L VN N ++I
Sbjct: 177 QRVSLAHPHIAFSLVHNSSE---LFQLPDTNYRQRITNILGGKTNEKLVPVNENTEIVKI 233
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKR 300
SG++ P + + Q+ ++N R++ K P LNH + A+F+ G LK K
Sbjct: 234 SGFVGKPEYAKRTRGEQFFFVNDRFI-KSP---YLNHAVTAAFE---------GLLKDK- 279
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+ P+Y L L+ D+ P KT + F D + A + AI+
Sbjct: 280 ----SYPSYFLYLKVDPKSIDINIHPTKTEIKFDDEHALYAILRSAIK 323
>gi|291524850|emb|CBK90437.1| DNA mismatch repair protein MutL [Eubacterium rectale DSM 17629]
Length = 618
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 156/289 (53%), Gaps = 20/289 (6%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ VV+ELV N++DAG+T + V + G+ ++++
Sbjct: 1 MPNIAILNQETIDKIAAGEVVERPCSVVKELVENAIDAGSTAITVEIKEGGIS--FIRIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI RD + + RH+ TSK+ +D + + GFRGEAL+SIS V+ +E+ITK
Sbjct: 59 DNGCGIERDQVAVAFYRHS-TSKI---RSAEDLLTVKSLGFRGEALSSISAVARVELITK 114
Query: 118 AHGRPNGYRKVMKGSKCLY---LGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
+ G R V++GSK L +G D GTT + +DLFYN P RRK+++++ +
Sbjct: 115 TYDELTGTRYVIEGSKELSNEEIGAPD-----GTTFIVKDLFYNVPARRKFLKTAQTEGS 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
+ + V ++AL HP +SFKFI+ + L T + + ++ FG E S L EV
Sbjct: 170 Y-ISDMVEKLALSHPDISFKFIN--NNQTKLHTSGNGNRKDIIYHIFGREISSSLLEVKH 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
++ G+I P + + ++ +IN RYV + + + SF
Sbjct: 227 ECEYFKVEGFIGKPVITRGNRNYENYFINGRYVKSNILSRAIEEAYKSF 275
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 34/204 (16%)
Query: 1169 VLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS-------VAYLDAE 1221
++ Q+ K + + L +IDQHAA E++ E+ ++ + + S V LDA
Sbjct: 432 IIGQLFKTYWLIEFEDKLYIIDQHAAHEKVLYEKTMARLANKDFTSQRISPPIVMTLDAR 491
Query: 1222 QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CI 1280
+ ++L+ + QI+ +G+ + G + + + A+P +
Sbjct: 492 E--------CEMLEKYRPQIEQFGY--EVEHFGGKEY--------------MISAIPDNL 527
Query: 1281 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1340
F +++ D+ +E L ++ G T P + + S +C+ A+ D L E +++E
Sbjct: 528 FNIDMKDL-FIEMLDDFSNATGRQT-PDIITEKVASMSCKAAVKGNDKLTLPEINKLIDE 585
Query: 1341 LKQTSLCFQCAHGRPTTVPLVNLE 1364
L + C HGRPT + + E
Sbjct: 586 LLSLDNPYNCPHGRPTIISMSKYE 609
>gi|304382086|ref|ZP_07364597.1| DNA mismatch repair protein MutL [Prevotella marshii DSM 16973]
gi|304336684|gb|EFM02909.1| DNA mismatch repair protein MutL [Prevotella marshii DSM 16973]
Length = 604
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 187/396 (47%), Gaps = 29/396 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ V++ELV N+VDAGA + V V ++V+DDG G
Sbjct: 5 IQLLPDTVANQIAAGEVIQRPASVIKELVENAVDAGAETIHVSVTDAGRTSIQVIDDGCG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ DD + T GFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSDTDARLSFERHA-TSKI---RKADDLFALHTMGFRGEALASIAAVAQIELRTRLRGTQ 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G R + G + + G + GT + +LF+N P RRK+++S+ ++ H +
Sbjct: 121 LGTRLSVSGFQ--FTGQEPVSCAEGTNITVENLFFNVPARRKFLKSNATELSH-ITTVFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI LV+P + F + S L + + +I FG + L + A+ IS
Sbjct: 178 RIVLVNPHIRFT---LHSNGTELFNLAQGTTRQRIIDIFGRKLNQELLPIKADTQLCRIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+I P + A Q+ ++N RY+ K P + A + + G
Sbjct: 235 GFIGKPESARKRGARQFFFVNGRYM-KHP------YFAKAVMSAYERLVPAG-------- 279
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
+ P ++ P + D+ P KT + F++ +P+ + A+R + K S D
Sbjct: 280 -EQIPYFIYFDVNPQDI-DVNIHPTKTEIKFENEQPIWQILSAAVRETFGKFNDVPSIDF 337
Query: 363 DMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQR 398
D ++P+ + +H ++ ++ +P N K++
Sbjct: 338 DTQGKPDIPVFNP-LPNHATTPKVNYNPFYNPFKEQ 372
>gi|421767302|ref|ZP_16204057.1| DNA mismatch repair protein MutL [Lactococcus garvieae DCC43]
gi|407624222|gb|EKF51003.1| DNA mismatch repair protein MutL [Lactococcus garvieae DCC43]
Length = 630
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 173/355 (48%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAGA+++ V + ++V+D+
Sbjct: 1 MGKIIELDEALANQIAAGEVVERPASVVKELVENSIDAGASRIVVKIKESGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI ++ + +RH ATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GVGIEKEDVAKALKRH-ATSKIKDKADL---FKIRTLGFRGEAMPSIASVSEFSIETSVL 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G V G K L +R+ GT V +LFYN P R KY++S ++ H +
Sbjct: 117 EEESGTHLVSHGGKIDTLEPVAKRE--GTKVTVENLFYNTPARLKYIRSLQAELSH-ITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R ++ HP+VSF I+ EL+ T + ++ S +G+ + +V A D
Sbjct: 174 VINRQSMAHPEVSFTLIN--EGRELMKTAGNGDLRQVIASVYGLPTAKKMLKVEAEDLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+SGY+S P + + + + + IN R++ + LLN G+ G
Sbjct: 232 TVSGYVSLPELTRANRNYITLMINGRFIK----NFLLNRAIIE-----------GY--GN 274
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
R P +L++ L D+ P K V +++ I AI+ ++++
Sbjct: 275 RLMVGRFPIVVLSIGIDPQLADVNVHPTKQEVRLSKERELMSLITEAIQKVFVEE 329
>gi|281423981|ref|ZP_06254894.1| DNA mismatch repair protein MutL [Prevotella oris F0302]
gi|281401906|gb|EFB32737.1| DNA mismatch repair protein MutL [Prevotella oris F0302]
Length = 611
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 165/348 (47%), Gaps = 28/348 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ VV+ELV N+VDAGA + V V ++V+DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAVDAGAKNIQVQVIDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK + DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERH-ATSK---IRKADDLFALHTMGFRGEALASIAAVAQVELKTRQEKDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + GS+ ++G + VG + LFYN P RRK+++S+ + L+++
Sbjct: 121 IGTHLSIAGSR--FVGQEPCSCSVGCSFSINSLFYNVPARRKFLKSNSTE-LNNIITAFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+P +SF + S L + +I FG L VN + I+
Sbjct: 178 RIALVYPDISFS---LHSNGTELFNLKAGVLRQRIIDIFGKRLNQELLSVNVDTTMCRIN 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A QY+++N RY+ H N KA +
Sbjct: 235 GFVGKPQSARKKGAHQYLFVNGRYMK----HPYFN------------KAVTAAFERLVPA 278
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
+ P +L P + D+ P KT + F++ P+ + A++ A
Sbjct: 279 GEQVPYFLYFEVAPEDI-DVNIHPTKTEIKFENEVPIWQILSAAVKEA 325
>gi|403060149|ref|YP_006648366.1| hypothetical protein PCC21_037100 [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402807475|gb|AFR05113.1| hypothetical protein PCC21_037100 [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 669
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 172/352 (48%), Gaps = 33/352 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHA-TSKI---ATLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 238
RIAL V+ I + +L+ ++ G I +FL V+ G
Sbjct: 177 RIALARFDVA---ITLHHNGKLIRQYRAAPDKNQYERRLGSICGATFLQHALAVSWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P + + QY Y+N R + +L+NH A +
Sbjct: 234 LTIHGWVADPVGAKQLPDMQYCYVNQRMMRD----RLINH------------AIRQAYQD 277
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
+ S Q PAY+L L PH + D+ P K V F V FI +A+ S
Sbjct: 278 QLSDEQQ-PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMS 327
>gi|448664389|ref|ZP_21684192.1| DNA mismatch repair protein MutL [Haloarcula amylolytica JCM 13557]
gi|445775034|gb|EMA26048.1| DNA mismatch repair protein MutL [Haloarcula amylolytica JCM 13557]
Length = 716
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 166/370 (44%), Gaps = 41/370 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + + +G V+ VV+ELV N++DA AT+V V V ++V DD
Sbjct: 1 MTDIQRLDDRTVERIAAGEVVERPASVVKELVENAIDADATRVEVVVEAGGTDGIRVTDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R+ + E+H TSK+ +AD++ G+GT GFRGEAL +I VS L + T+
Sbjct: 61 GVGMDREAVETAVEKHT-TSKIRDIADLE--GGVGTLGFRGEALHAIGAVSRLTVRTRPR 117
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G V++G +G + GTT+ DLFYN P RRKY++ + H V
Sbjct: 118 GGDVGTELVLEGGDVTSVGPAGCPE--GTTIAVEDLFYNVPARRKYLKQESTEFAH-VNT 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFL------DEVN 233
V AL +P V+ + E T ++S +G E + E N
Sbjct: 175 VVASYALANPDVAVSL--THGDRETFSTTGQDDLRETVMSVYGREVAESMISVGAGSEAN 232
Query: 234 AN--------DGALE-ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFD 284
A+ DG L+ + G +S P + + + + Y+N RYV G + A D
Sbjct: 233 ADGDESDSFPDGPLDGVHGLVSHPETNRAGREYLSTYVNGRYVRAGTVRD------AVID 286
Query: 285 CSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIE 344
+ A + + P +L L P D+ P K V F D E V +
Sbjct: 287 AYGTQIAPDRY-----------PFAVLFLDVPAGDVDVNVHPRKMEVRFADDEGVREQVR 335
Query: 345 RAIRSAWMKK 354
A+ A +++
Sbjct: 336 TAVEDALLRE 345
>gi|410095924|ref|ZP_11290916.1| DNA mismatch repair protein mutL [Parabacteroides goldsteinii
CL02T12C30]
gi|409227955|gb|EKN20850.1| DNA mismatch repair protein mutL [Parabacteroides goldsteinii
CL02T12C30]
Length = 632
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 179/373 (47%), Gaps = 34/373 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ VV+ELV N++DAGA + V + ++VVDDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASVVKELVENAIDAGAAHIQVNIKDAGRTLIQVVDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +D + T GFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSETDARMAFERHA-TSKI---SSAEDLFSLHTMGFRGEALASIAAVAHVELRTRLRGTE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + + GS ++D D G+ ++LF+N P RRK+++S+ + + + +
Sbjct: 121 LGTKLSIAGST-----LEDISPDACTEGSIFSIKNLFFNVPARRKFLKSNETEFRNIINE 175
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
RIALV+P+V+ + D + S +I+ +G L V+A +
Sbjct: 176 FE-RIALVNPQVALV---LNHNDTEIFNLPESGLRQRIINVYGKNLNQKLLSVDAQSSLV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
ISG++ P + A QY ++N R++ HK + +A +
Sbjct: 232 TISGFVGRPDSAKKRGALQYFFVNGRFMKHPYFHKAV------------MQAYEQLIPPG 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
P Y + S D+ P KT + F++ +P+ + A R A K A +
Sbjct: 280 EQ-----PNYFIYFTLDPSTIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPT 334
Query: 360 FDVDMLEDAELPL 372
D D+ + ++P+
Sbjct: 335 IDFDVEDAIDIPV 347
>gi|423226035|ref|ZP_17212501.1| DNA mismatch repair protein mutL [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630892|gb|EIY24873.1| DNA mismatch repair protein mutL [Bacteroides cellulosilyticus
CL02T12C19]
Length = 643
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 182/370 (49%), Gaps = 46/370 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A ++ V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQEIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALAS++ V+ +E+ T+
Sbjct: 65 MSETDARLAFERHA-TSKIRQAADL---FALRTMGFRGEALASVAAVAEVELKTRMANEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRIVIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F + S D L + +++ FG + L V+ +
Sbjct: 174 TEFERIALVHPEVAFY---LYSNDTELFNLPAMPLRQRILAVFGKKLNQHLLSVDVDTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SG+++ P + A QY ++N RY+ HK + D+++
Sbjct: 231 VKVSGFVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 -----QLIPAGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQIVSAAVKESLGK 328
Query: 354 KIAHDSFDVD 363
A S D D
Sbjct: 329 FNAVPSIDFD 338
>gi|340788753|ref|YP_004754218.1| DNA mismatch repair protein MutL [Collimonas fungivorans Ter331]
gi|340554020|gb|AEK63395.1| DNA mismatch repair protein MutL [Collimonas fungivorans Ter331]
Length = 621
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 175/355 (49%), Gaps = 33/355 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I +LP+ + + + +G V+ + VV+EL+ NS+DAGA+++ V + + + D+G G
Sbjct: 11 IQQLPDNLISQIAAGEVVERPSAVVKELLENSLDAGASQITVRLEQGGVKRIAITDNGRG 70
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I+ + L L RHA TSK+ L D+++ + T GFRGEALASI+ VS L + ++
Sbjct: 71 IAPEQLPLALARHA-TSKISSLHDLEN---VATLGFRGEALASIASVSQLTLSSRTAD-- 124
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G+ + GS L + GTTV +DL++N P RRK+++S + H + V
Sbjct: 125 AGHASEIDGST---LAVTPSSGAQGTTVDVQDLYFNTPARRKFLKSEQTEFGH-CAEVVR 180
Query: 183 RIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
RIAL P VSF + ++ D T + ++L + F + LDE G L +
Sbjct: 181 RIALARPDVSFSLTHNGKTVDHWNITEIAKRSASILGNEFANARLA-LDE---GAGPLRL 236
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
G++ P S + QY Y+N R+V KLL H + A L G R
Sbjct: 237 HGFVGLPTASKARADAQYFYVNGRFVRD----KLLVHAVRA--------AYQDVLHGDR- 283
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
P+Y+L L +L D+ P K V F+D V F+ A+ A + A
Sbjct: 284 ----YPSYVLGLDLDPALVDVNVHPSKIEVRFRDSRSVHQFVFHAVSRALAQTSA 334
>gi|189463695|ref|ZP_03012480.1| hypothetical protein BACINT_00026 [Bacteroides intestinalis DSM
17393]
gi|189438645|gb|EDV07630.1| DNA mismatch repair domain protein [Bacteroides intestinalis DSM
17393]
Length = 642
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 182/370 (49%), Gaps = 46/370 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A ++ V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQEIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALAS++ V+ +E+ T+
Sbjct: 65 MSETDARLAFERHA-TSKIKEAADL---FALRTMGFRGEALASVAAVAEVELKTRTANEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRIVIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F + S D L +++ FG + +L V+ +
Sbjct: 174 TEFERIALVHPEVAFY---LYSNDTELFNLPVMPLRQRILAVFGKKLNQYLLSVDVDTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SG+++ P + A QY ++N RY+ HK + D+++
Sbjct: 231 VKVSGFVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 274 -----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 354 KIAHDSFDVD 363
A S D D
Sbjct: 329 FNAVPSIDFD 338
>gi|357043899|ref|ZP_09105585.1| DNA mismatch repair protein mutL [Prevotella histicola F0411]
gi|355367953|gb|EHG15379.1| DNA mismatch repair protein mutL [Prevotella histicola F0411]
Length = 622
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 169/349 (48%), Gaps = 32/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP++V N + +G V+ VV+ELV N++DAGA+ + + V ++V+DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAIDAGASNINVIIVDAGRTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ DD + T GFRGEALASI+ V+ +++ T+ G
Sbjct: 65 MSETDARLSFERHA-TSKI---RKADDLFSLHTMGFRGEALASIAAVAQIDLKTRMEGED 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + + GS+ ++G + VG+ +LF+N P RRK+++S+ + L+++
Sbjct: 121 LGTQLTISGSR--FVGQEPCACPVGSNFTVENLFFNVPARRKFLKSNTTE-LNNIITAFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI LV+P++SF + S L S S ++ FG L + + I
Sbjct: 178 RIVLVYPQISFT---LHSNGTELFNLRSCSYRQRIVEVFGKRLNQDLLPIGVDTSLCRIH 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + QY ++N RY+ HK + +FD +
Sbjct: 235 GFVGKPESARKKVLQQYFFVNERYMKHAYFHKA---VMTAFD-------------RLIPQ 278
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAI 347
+ P Y L P D+ P KT + F++ W+ +LA ++ A+
Sbjct: 279 GEQIP-YFLYFEVPAENIDVNIHPTKTEIKFENEQAIWQILLASVKEAV 326
>gi|399926184|ref|ZP_10783542.1| DNA mismatch repair protein MutL [Myroides injenensis M09-0166]
Length = 721
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 171/346 (49%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ NSVDAGAT++ + ++V+D+G G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPASVVKELIENSVDAGATEIKLILKEAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+ + ERH ATSK+ D+ + T GFRGEALASI+ ++ +E+ T+
Sbjct: 65 MGETDARMAFERH-ATSKISRAEDL---FALKTKGFRGEALASIAAIAHVELKTRTAETE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G +++G+K + + +GT+ ++LF+N P RR +++S+ + + V +
Sbjct: 121 LGTHIIIEGTKV--VSQEPTVTPIGTSFSVKNLFFNIPARRNFLKSNNVEFRNIVDEFE- 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALVH V F I SE + S+ +++ FG L + N + IS
Sbjct: 178 RIALVHYDVQFSLIHNGSE---VFNLPVSNIRQRIVNVFGSRTNEKLVPIKENTDIVGIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + + Q+ ++N R+V G +H + + AS++ G L K
Sbjct: 235 GFVGKPEFAKKSRGEQFFFVNDRFVKSGYLH---HAVLASYE---------GLL-----K 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P+Y + L+ P D+ P KT V F D + + + + I+
Sbjct: 278 EGTHPSYFIYLQVPADSIDINIHPTKTEVKFDDEQALYSILRSTIK 323
>gi|317049758|ref|YP_004117406.1| DNA mismatch repair protein MutL [Pantoea sp. At-9b]
gi|316951375|gb|ADU70850.1| DNA mismatch repair protein MutL [Pantoea sp. At-9b]
Length = 613
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 171/353 (48%), Gaps = 33/353 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ V + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDVDIEKGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I++D L + RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IAKDELAMALARHA-TSKI---ASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTEAQT 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + +
Sbjct: 119 EAWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVIR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLD---EVNANDGA 238
RIAL V+ I + +L+ S A G I +F+ ++
Sbjct: 177 RIALARFDVA---ISLSHNGKLMRQYRGVSQDAQRERRLGAICGTTFMQHALRIDWQHDD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L + G+++ P S V QY Y+N R + KL+NH +++ G
Sbjct: 234 LALRGWVADPAGSRQVTDLQYCYVNGRMMRD----KLINH-----AIRQAYQTQLG---- 280
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
+ PAY+L L PH + D+ P K V F V FI + + SA
Sbjct: 281 ----DEQQPAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIWQGVMSA 328
>gi|427414200|ref|ZP_18904390.1| DNA mismatch repair protein MutL [Veillonella ratti
ACS-216-V-Col6b]
gi|425714576|gb|EKU77579.1| DNA mismatch repair protein MutL [Veillonella ratti
ACS-216-V-Col6b]
Length = 694
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 178/365 (48%), Gaps = 40/365 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDD 59
M I+ L E N + +G V+ V++EL+ NS+DAGAT + V + Y++V D+
Sbjct: 1 MALIHVLDEVTINKIAAGEVVERPASVIKELLENSLDAGATSIEVEIANGGTTYMRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSG+S + L RHA TSK+ + D+ D I + GFRGEALASI+ VS + T+
Sbjct: 61 GSGMSEEDARLAVLRHA-TSKIRSVDDLFD---IASLGFRGEALASIASVSHFSLTTRKV 116
Query: 120 GRPNGYRKVMKGSK---CLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+ G R ++ G K CL G GTT+ RDLF+N P RRK++++ +
Sbjct: 117 DQELGTRILIDGGKFTDCLPFGAQP-----GTTIEVRDLFFNTPARRKFLKTE-RTESAK 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAN 235
++ V ++AL +P V+FK I+ D + + L +S+ +G + + +
Sbjct: 171 IQDIVGKLALSNPHVAFKLIN---NDTVSIVVPGNGNLIDTVSALYGYKVSDDIFPIVYE 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ I G +S P S + +Q V +N+R + I K +++ A +
Sbjct: 228 SEGIHIQGVVSKPTLLKSSRIWQTVVVNNRVIGDKAITKAIDN------------AYHAL 275
Query: 296 L-KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW--- 351
L KG P LL + P D+ P K+ V F+D +PV + AI A
Sbjct: 276 LPKG------GYPLVLLTITVPPGTVDINVHPRKSEVKFEDDKPVFKAVYHAILQALQNP 329
Query: 352 MKKIA 356
M+++A
Sbjct: 330 MQQVA 334
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 50/204 (24%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEEL---RHKVLSGEGKSVAYLDA-EQELV 1225
L QV +I G L +IDQHAA ERIR ++L + E Y+DA E+EL+
Sbjct: 512 LGQVAACYILAKKGDNLYIIDQHAAHERIRYDQLCKSAESIPMQELLISQYIDANEEELI 571
Query: 1226 LPE--------IGYQLLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
+ E +G+Q++Q Q+K G I + ++G +LL+
Sbjct: 572 IAEEQNETLLNLGFQVVQGGPTQLKIEGMPIDLVESKGEEILRYVFSLLKDY-------- 623
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKACRGAIMFGDSLLPSEC 1334
T + LR +L +CRGAI G +L +
Sbjct: 624 ---------------------------QTPTKAQLRHEMLAYASCRGAIKAGHTLNTYQM 656
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTV 1358
++++E+L T + C HGRPT +
Sbjct: 657 SVLIEDLFHTDKPYVCPHGRPTII 680
>gi|86142881|ref|ZP_01061303.1| putative DNA mismatch repair protein [Leeuwenhoekiella blandensis
MED217]
gi|85830326|gb|EAQ48785.1| putative DNA mismatch repair protein [Leeuwenhoekiella blandensis
MED217]
Length = 628
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 170/347 (48%), Gaps = 30/347 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGA+ + + V ++V+DDG G
Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASSIKLLVKDAGRTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ DD + T GFRGEALASI+ V+ +++ TK
Sbjct: 65 MSPTDARLSFERHA-TSKINA---ADDLFALSTKGFRGEALASIAAVAHVDLKTKPEDEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + ++GS + K GT++ ++LF+N P RR +++S ++ H + +
Sbjct: 121 VGTQIEIEGSTIKNQEVCAAVK--GTSIAVKNLFFNIPARRNFLKSDSVELRHVIDEF-Q 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL H ++F +SE L ++ ++ FG + L V+ + I
Sbjct: 178 RVALAHETIAFTLYHNDSE---LFNLPKTNKRQRIVGVFGPKTNEKLVPVSEETEIVNID 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKRS 301
G+I P S K Q+ ++N R++ H LNH ++A+FD G L +
Sbjct: 235 GFIIKPEFSKKTKGEQFFFVNDRFIK----HPYLNHSVSAAFD---------GLLPDR-- 279
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
A +Y + L+ D+ P KT V F+D + + A++
Sbjct: 280 ---ARASYFIYLKVDPKTIDINIHPTKTEVKFEDEHAIYTLLRAAVK 323
>gi|218132527|ref|ZP_03461331.1| hypothetical protein BACPEC_00386 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992637|gb|EEC58639.1| DNA mismatch repair domain protein [[Bacteroides] pectinophilus
ATCC 43243]
Length = 644
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 176/351 (50%), Gaps = 31/351 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVVDDG 60
I L + N + +G V+ VV+EL N++DA AT V + + G+ ++++ D+G
Sbjct: 3 IQILDQNTINKIAAGEVIERPASVVKELAENAIDAMATAVTIEIKDGGIS--FIRITDNG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
GI + + + RH+ TSK+ + D+ + + GFRGEAL+SI+ V+ +E+ITK
Sbjct: 61 CGIDKGEIPMAFLRHS-TSKIKSVEDL---MCVRSLGFRGEALSSIAAVAQIELITKTKE 116
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
G R V++G K ++D GTT + R+LFYN PVRRK+++++ + + V
Sbjct: 117 AFTGVRYVIEGGK--EQNMEDIGAPDGTTFIVRNLFYNTPVRRKFLKTATTEAGY-VSAL 173
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
V +A HP+VSF+FI+ + L T + S ++ G + + L EV+A ++
Sbjct: 174 VEHLAFSHPEVSFRFIN--NGQNKLYTSGNGSLKDIIYHVNGRDIATNLLEVSAKTQDIQ 231
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
ISG+I P S + ++ +IN RY+ I + + G+ KG
Sbjct: 232 ISGFIGKPMISRGNRTYENYFINGRYIKSNIITRAIEE---------------GY-KGYI 275
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+ Q P L+ S+ D+ P K + F E V F+ AIR+
Sbjct: 276 MQHQ-YPFTALHFTIEQSIIDVNVHPTKMELRFSQNEFVYDFVLNAIRNTL 325
Score = 46.6 bits (109), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 45/205 (21%)
Query: 1169 VLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPE 1228
++Q DK FI +DQHAA E+I E H++ SG + +++ P
Sbjct: 467 IIQFEDKMFI----------MDQHAAHEKILYERTMHRLESG--------SIDTQIIAPP 508
Query: 1229 IGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVI--------TLLAVPCI 1280
+ I +++ + ++N+++ R I + +P
Sbjct: 509 V-----------------ILSLNMREKEVVSQNIDIFTRLGFEIESFGGNEYKVTGMPAT 551
Query: 1281 FGVNLSDVDLL-EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1339
+L D +LL + + L + G+S+ P + + + S +C+ A+ + +E +VE
Sbjct: 552 LP-SLDDRELLMDIIDSLMEEGGASSKPELITQRVASMSCKAAVKGNMRMSFAEAQNLVE 610
Query: 1340 ELKQTSLCFQCAHGRPTTVPLVNLE 1364
EL + C HGRPT + + E
Sbjct: 611 ELMNADNPYNCPHGRPTLISMSKYE 635
>gi|227115182|ref|ZP_03828838.1| DNA mismatch repair protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 669
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 172/352 (48%), Gaps = 33/352 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHA-TSKI---ATLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 238
RIAL V+ I + +L+ ++ G I +FL V+ G
Sbjct: 177 RIALARFDVA---ITLHHNGKLIRQYRAAPDKNQYERRLGSICGATFLQHALVVSWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P + + QY Y+N R + +L+NH A +
Sbjct: 234 LTIHGWVADPVGAKQLPDMQYCYVNQRMMRD----RLINH------------AIRQAYQD 277
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
+ S Q PAY+L L PH + D+ P K V F V FI +A+ S
Sbjct: 278 QLSDEQQ-PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMS 327
>gi|381186095|ref|ZP_09893670.1| DNA mismatch repair protein MutL [Flavobacterium frigoris PS1]
gi|379651891|gb|EIA10451.1| DNA mismatch repair protein MutL [Flavobacterium frigoris PS1]
Length = 616
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 171/346 (49%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDA +T + + V+V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAVDARSTDIKLIIKDAGKALVQVIDNGLG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ D+ + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSVTDARLCFERHA-TSKIRKAEDL---FSLHTKGFRGEALASIAAIAHVEMKTKQDQEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + +++GSK + + K GT+ ++LF+N P RR +++S ++ H V +
Sbjct: 121 LGTQIIVEGSKFVSQEVAVLPK--GTSFAVKNLFFNIPARRNFLKSDTVELRHIVDEF-Q 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP + F F SE + SS +++ F + L V + I
Sbjct: 178 RVALAHPNIYFTFYHNGSE---MFNLPGSSLRQRIVNIFSGKTNQKLVPVQEETEIVTIQ 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++S P + + Q+ ++N RY+ G +H + + A++D G L K
Sbjct: 235 GFVSKPEFAKKNRGEQFFFVNDRYIKSGYLH---HAVMAAYD---------GIL-----K 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
A P+Y L L P + D+ P KT + F D + A + +I+
Sbjct: 278 DGAQPSYFLYLTVPPNTIDINIHPTKTEIKFDDEHALYAILRASIK 323
>gi|423303996|ref|ZP_17281995.1| DNA mismatch repair protein mutL [Bacteroides uniformis CL03T00C23]
gi|423307280|ref|ZP_17285270.1| DNA mismatch repair protein mutL [Bacteroides uniformis CL03T12C37]
gi|392685924|gb|EIY79232.1| DNA mismatch repair protein mutL [Bacteroides uniformis CL03T00C23]
gi|392690532|gb|EIY83795.1| DNA mismatch repair protein mutL [Bacteroides uniformis CL03T12C37]
Length = 638
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 188/384 (48%), Gaps = 47/384 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ VV+ELV N++DA A ++ V + ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVVKELVENAIDAEAGEIHVLITDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREAADL---FALRTMGFRGEALASIAAVAEVELKTRPVSEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRLLIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F + S D L +++ FG + L V+ N
Sbjct: 174 TEFERIALVHPEVAFY---LYSNDTELFNLPVMPLRQRIMAVFGKKLNQQLLSVDVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ISG+++ P S A QY ++N RY+ HK + D+++
Sbjct: 231 IKISGFVAKPETSRKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 -----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELP-LESSR 376
A + D D + ++P E +R
Sbjct: 329 FSAIPTIDFDTEDMPDIPAFEQAR 352
>gi|300855301|ref|YP_003780285.1| DNA mismatch repair protein MutL [Clostridium ljungdahlii DSM
13528]
gi|300435416|gb|ADK15183.1| predicted DNA mismatch repair protein MutL [Clostridium ljungdahlii
DSM 13528]
Length = 610
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 201/426 (47%), Gaps = 40/426 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M IN L E N + +G V+ + V++EL+ NS+D+GA + + + +K++DD
Sbjct: 2 MKRINLLDENTSNKIAAGEVVEGPSSVIKELLENSIDSGAKNITIEIEEGGEKSIKIIDD 61
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + HA TSK+ + D+D I T GFRGEAL SI+ VS + +KA
Sbjct: 62 GWGIHPLDIKKAFMPHA-TSKISTVEDLDK---ISTLGFRGEALCSIASVSNTILKSKAE 117
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
G G ++ G G+ E +++ GTT++ DLF+N P R+K+++ SP +
Sbjct: 118 GFDVGNEIIISG------GVLKETQEIGCNKGTTILVEDLFFNVPARKKFLK-SPSREAA 170
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
+ V R++L +P +SFKF ++ + L T + + ++ +G + + V +
Sbjct: 171 GISDIVTRLSLANPNISFKF--FKNGKKALTTYGTGKVMDVIRCVYGKNIYENIIPVEKH 228
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ I GYI + S + Q ++IN RYV I +A+ S+ N F
Sbjct: 229 SDIISICGYIGNSEISRGSRNNQSIFINKRYVKNKSIT------SAAEQAFKSFLTINKF 282
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
P ++L + D+ P K V F D V F+ AI A +++
Sbjct: 283 -----------PFFILFIDIFPEFVDVNVHPAKWEVKFSDSRMVFKFVFDAIHEA-LRES 330
Query: 356 AHDSFDVDMLEDAELPLES-SRFQSHQSSTHLHSSPLKNLAKQRD--HMFHKECERITFQ 412
DSF +D+ ED P ++ + + Q L SP + + +++ +F K E
Sbjct: 331 LKDSFTIDLKEDDLKPKKTETEIKEVQIPIDLK-SPNEGIYIEKNGSSLFKKSKENSNKN 389
Query: 413 EFQKDP 418
EF K+P
Sbjct: 390 EFIKEP 395
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 90/212 (42%), Gaps = 34/212 (16%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
+++ Q +I L +IDQHAA E+I E+ + + G + Q L+ P
Sbjct: 423 RIIGQFHSTYIIAEDSSNLYMIDQHAAHEKILFEKYKKSIQKG-------MVLSQVLITP 475
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNK---NLNLLQRQITVITLLAVPCIFGV- 1283
I IKD+ N + F K N+ L I++ VP I G
Sbjct: 476 VI-------MELTIKDY----NCFIENRDLFKKTGFNVELFGNN--TISIREVPMILGKP 522
Query: 1284 ---NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1340
NL +D+L+ L+ + GS T L + AC+ AI S+ E ++EE
Sbjct: 523 DMKNLF-MDILDNLKNM----GSGDTWEVKYLSLATLACKAAIKANASISEIEMNHLIEE 577
Query: 1341 LKQTSLCFQCAHGRPTTVPLV--NLEALHKQI 1370
L+ F C HGRPT + L +LE K+I
Sbjct: 578 LRFIDDPFNCPHGRPTIIKLTLNDLEKKFKRI 609
>gi|433546743|ref|ZP_20503047.1| DNA mismatch repair protein MutL [Brevibacillus agri BAB-2500]
gi|432181963|gb|ELK39560.1| DNA mismatch repair protein MutL [Brevibacillus agri BAB-2500]
Length = 786
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 166/352 (47%), Gaps = 31/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DA AT + ++V +++VD+
Sbjct: 1 MGNIRVLDEQLANMIAAGEVVERPASVVKELVENAIDASATSIEIHVEEGGLELIRIVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ RD +L ERH ATSK+ D+ I T GFRGEAL SI+ VS +E+ +
Sbjct: 61 GHGMDRDDCLLALERH-ATSKISTPRDLFR---IRTLGFRGEALPSIAAVSRMELTSNRS 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
R G R +++G + + D GT + R LF+N P R KYM+S +V H +
Sbjct: 117 SREIGTRLLVEGGEVRE--VADAAAVQGTEICVRSLFFNTPARLKYMKSIATEVGH-ISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP +SF + LL T L ++ + +G++ L ++
Sbjct: 174 YVNRLALTHPGISFTLT--HNGKTLLQTTGDGKLLHVMAAIYGVQVAKLLLPISGETLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
G++S + + +++ +N RYV S+ NN ++G
Sbjct: 232 RWDGFLSKTEVTRANRSYLSTLVNGRYV-------------------RSYSLNNAIMRGY 272
Query: 300 RS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
+ P L + +L D+ P K F + + + IE+++++
Sbjct: 273 HTLLPIGRFPIVALQIEMDPTLVDVNVHPAKLEARFSKEDELCSAIEQSVKT 324
>gi|399055635|ref|ZP_10743330.1| DNA mismatch repair protein MutL [Brevibacillus sp. CF112]
gi|398046844|gb|EJL39428.1| DNA mismatch repair protein MutL [Brevibacillus sp. CF112]
Length = 786
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 166/352 (47%), Gaps = 31/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DA AT + ++V +++VD+
Sbjct: 1 MGNIRVLDEQLANMIAAGEVVERPASVVKELVENAIDASATSIEIHVEEGGLELIRIVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ RD +L ERH ATSK+ D+ I T GFRGEAL SI+ VS +E+ +
Sbjct: 61 GHGMDRDDCLLALERH-ATSKISTPRDLFR---IRTLGFRGEALPSIAAVSRMELTSNRS 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
R G R +++G + + D GT + R LF+N P R KYM+S +V H +
Sbjct: 117 SREIGTRLLVEGGEVRE--VADAAAVQGTEICVRSLFFNTPARLKYMKSIATEVGH-ISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP +SF + LL T L ++ + +G++ L ++
Sbjct: 174 YVNRLALTHPGISFTLT--HNGKTLLQTTGDGKLLHVMAAIYGVQVAKLLLPISGETLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
G++S + + +++ +N RYV S+ NN ++G
Sbjct: 232 RWDGFLSKTEVTRANRSYLSTLVNGRYV-------------------RSYSLNNAIMRGY 272
Query: 300 RS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
+ P L + +L D+ P K F + + + IE+++++
Sbjct: 273 HTLLPIGRFPIVALQIEMDPTLVDVNVHPAKLEARFSKEDELCSAIEQSVKT 324
>gi|116493021|ref|YP_804756.1| DNA mismatch repair protein [Pediococcus pentosaceus ATCC 25745]
gi|122265515|sp|Q03EQ8.1|MUTL_PEDPA RecName: Full=DNA mismatch repair protein MutL
gi|116103171|gb|ABJ68314.1| DNA mismatch repair protein MutL [Pediococcus pentosaceus ATCC
25745]
Length = 645
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 202/425 (47%), Gaps = 50/425 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ L E + + + +G V+ VV+ELV N++DAG++++ + + ++++D+
Sbjct: 1 MAEIHELSEILADQIAAGEVVERPASVVKELVENAIDAGSSRIDILLEESGLKMIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEAL---ASISDVSLLEIIT 116
GSGI + + + +RHA TSK+ +D+ +GT GFRGEAL ASI+DV +L T
Sbjct: 61 GSGIDANQVEIAFKRHA-TSKISSRSDL---FKVGTLGFRGEALPSIASIADVEMLTATT 116
Query: 117 KAHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G+ YR G K G D + GT + +DLF+N P R KY++S + L
Sbjct: 117 DGPGKKIHYR----GGKLEDSG--DAQSRQGTDITVQDLFFNTPARLKYLKSLQTE-LSK 169
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V RIAL +P+V+ +E EL+ T + + +L + +G ++ + V +
Sbjct: 170 ITDIVNRIALSYPEVAISL--QNNERELMRTSGNGNIQQVLANIYGAKNAQKMVHVKEQN 227
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
I GYIS P + + +++ V +N RY+ I K + +G+
Sbjct: 228 IDFTIDGYISLPEFTRANRSYITVLVNGRYIKNFQISKAI---------------IDGY- 271
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
G + P +LN++ L D+ P K V + + +L I +A+ + K
Sbjct: 272 -GSKLMVGRYPVAVLNIKTDPILVDVNVHPTKQEVRISEEQTLLDLISKAVFNELADK-- 328
Query: 357 HDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQR-DHMFHKECERITFQEFQ 415
+++ DA L+ SR + + SS +LA+ F E + +T +
Sbjct: 329 ------NLIPDAVDNLKKSRVK-------VSSSEQLDLARMAISGSFEMEQDHVTIPDTD 375
Query: 416 KDPVE 420
D VE
Sbjct: 376 NDEVE 380
>gi|385810690|ref|YP_005847086.1| DNA mismatch repair protein [Ignavibacterium album JCM 16511]
gi|383802738|gb|AFH49818.1| DNA mismatch repair enzyme [Ignavibacterium album JCM 16511]
Length = 614
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 173/354 (48%), Gaps = 34/354 (9%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDG 60
G I LPE + N + +G V+ VV+EL+ NS+DA A + + ++V DDG
Sbjct: 3 GRIKILPENLANKIAAGEVVQRPESVVKELLENSIDAEAKNIELIIKQAGKSLIQVCDDG 62
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
G++ + +L ++HA TSK+ L+D++ I T GFRGEAL+SI+ VS LEI T+
Sbjct: 63 IGMTEEDAILCIQKHA-TSKISTLSDLE---AIRTLGFRGEALSSIAAVSQLEIRTQTAQ 118
Query: 121 RPNG-YRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ G ++ K + + + + GT V ++LFYN P RRK+++S ++ H +
Sbjct: 119 QEIGTLIRIEKEGEIIKEKVSVNK---GTCVSVKNLFYNTPARRKFLKSDATELKHII-D 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
RIAL HP+++FKF + D L+ S + + F L V L
Sbjct: 175 TFNRIALAHPEINFKFYN---NDSLVNDYKSGTLEERIAQIFADNMLDALIPVREKTEYL 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ GYI P K QY+Y+N R+V +K +NH A F + N KG
Sbjct: 232 SLHGYIGKPSIFRKSKGEQYLYLNKRFV----FNKHINH--AVFTAFE-----NILEKGD 280
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRS 349
P ++L + S D+ P K V F D + VLA I+++I S
Sbjct: 281 ------YPFFVLFMEIDPSKVDVNIHPSKLEVKFDDEKDVYNFVLAVIKKSIGS 328
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 30/202 (14%)
Query: 1165 EDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQEL 1224
E+ + Q+ K+I L +IDQH A ERI L K LS + + Q+L
Sbjct: 425 EEPSFIIQLHNKYILSQIKSGLMIIDQHVAHERI----LYEKALSRLETDIPF---SQQL 477
Query: 1225 VLP------EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
+ P Y++L+ + G+ SR + IT+ VP
Sbjct: 478 LFPITIQFDPASYEILKELNSHLHRLGFQLKF---SSRYY-------------ITIEGVP 521
Query: 1279 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1338
+ L EF+++ T+ + S +C+ AI GD L SE L++
Sbjct: 522 EDIKSGSEERILKEFIEEFK-TNQLEKKLEEKDNIAKSYSCKTAIKAGDKLSESEMRLLI 580
Query: 1339 EELKQTSLCFQCAHGRPTTVPL 1360
++L TS+ + C HGRP + +
Sbjct: 581 DQLFATSMPYVCPHGRPIVIKI 602
>gi|310642432|ref|YP_003947190.1| DNA mismatch repair protein mutl [Paenibacillus polymyxa SC2]
gi|386041502|ref|YP_005960456.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa M1]
gi|309247382|gb|ADO56949.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa SC2]
gi|343097540|emb|CCC85749.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa M1]
Length = 698
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 170/356 (47%), Gaps = 27/356 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I L E + N + +G V+ VV+ELV N++DAG T+V V+V ++V D+
Sbjct: 1 MSKIRVLDEHIANQIAAGEVVERPASVVKELVENAIDAGGTRVDVWVEEGGLQSIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI + + RH ATSK+GH D+ T + GFRGEAL SI+ VS +E++T A
Sbjct: 61 GSGIEPEDVETAFYRH-ATSKIGHGRDLFQIT---SLGFRGEALPSIAAVSKVELLTAAG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ V++G K + R+ GT RDLFYN P R KYM++ ++ H +
Sbjct: 117 DDGRARKLVIEGGKLMLHENAAGRQ--GTDFTVRDLFYNTPARLKYMKTIQTELGH-ISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL HP+V+F + + LL T + L ++ + +G + V
Sbjct: 174 VLYRMALSHPEVAFTL--RHNGNTLLQTLGNGDLLQVIAAIYGTSAAKSMLMVEGESLDY 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
ISGY+S P + S + +N R+V +++ L KA + L
Sbjct: 232 RISGYVSRPEWTRSNRNAISTVVNGRFVRSYGLNQAL------------LKAYHTLLPIN 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
R P ++ L SL D+ P K V F + +E ++++ +++
Sbjct: 280 R-----YPLAVIQLDMHPSLVDVNVHPAKLEVRFSKEAELFQLVEDSVKAVLGQQV 330
>gi|325661607|ref|ZP_08150231.1| hypothetical protein HMPREF0490_00965 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472134|gb|EGC75348.1| hypothetical protein HMPREF0490_00965 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 691
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 177/360 (49%), Gaps = 37/360 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ +V+ELV N++DA AT + V + G+ +++
Sbjct: 1 MPNIQVLDQVTIDKIAAGEVIERPASIVKELVENAIDAKATAITVEIKDGGIS--LIRIA 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI ++ + L RH+ TSK+ + D+ TGI + GFRGEAL+SI+ ++ +E+ TK
Sbjct: 59 DNGCGIPKEEVPLAFLRHS-TSKIRSVEDL---TGIASLGFRGEALSSIAAIAQVELRTK 114
Query: 118 AHGRPNGYRKVMKGS--KCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G + ++G K + +G+ D GTT R +F+N P RRK++++ +
Sbjct: 115 VKEADAGIQYRIEGGSEKSMEEIGMPD-----GTTFFVRQIFFNTPARRKFLKTPMTEAS 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
H V + + R+AL HP++SF+F + + L T + ++ +G + L E+NA
Sbjct: 170 H-VSELITRLALSHPEISFQF--LTNGQPKLHTSGNGRLKDVIYHIYGRDITGNLLEINA 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
+ I GYI P S + ++ YIN RYV I K + D++K G
Sbjct: 227 KANGVAIRGYIGKPLISRGNRNYENYYINGRYVKSSIIAKAI---------EDAYK---G 274
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
F + P +L+ + D+ P K V F + V FI ++ A +K
Sbjct: 275 F-----TMQHKYPFTVLHFTIDGTDLDVNVHPTKMEVRFSKQQEVYNFIYNTLKDALSEK 329
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 33/220 (15%)
Query: 1153 FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERI----RLEELRHKVL 1208
FF ++K ++ ++ QV + + V + +IDQHAA ER+ L+ ++ K
Sbjct: 488 FFDQKLLSKEAKQEYTLVGQVFETYWIVEYRDQMYIIDQHAAHERVLYERTLKRMKEKQF 547
Query: 1209 SGEGKS---VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLL 1265
+ + S V L ++E QLL E G+ I G S+
Sbjct: 548 TSQRISPPIVLNLSMQEE--------QLLSEHMENFTKIGF--EIEPFGGDSY------- 590
Query: 1266 QRQITVITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIM 1324
+ AVP +F + D+ L+E L L+D+ ++ P VL + S +C+ A+
Sbjct: 591 -------AVRAVPDNLFSIAKKDL-LIEMLDSLSDSISTNLAPDIVLEKIASMSCKAAVK 642
Query: 1325 FGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
L E ++ EL + + C HGRPT + + E
Sbjct: 643 GNSRLSGREVDALIGELLELDNPYHCPHGRPTIIAMTKRE 682
>gi|254479236|ref|ZP_05092581.1| DNA mismatch repair protein MutL [Carboxydibrachium pacificum DSM
12653]
gi|214034837|gb|EEB75566.1| DNA mismatch repair protein MutL [Carboxydibrachium pacificum DSM
12653]
Length = 590
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 172/356 (48%), Gaps = 35/356 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I+ L E N + +G V+ +V+ELV NS+DAG+ + V + G+ Y+KV
Sbjct: 1 MNKIHLLDEKTVNKIAAGEVVERPASIVKELVENSIDAGSKNITVEILEGGIP--YIKVT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
DDG G++ VL ERHA TSK+ D+ + T T GFRGEALASI+ VS + + TK
Sbjct: 59 DDGCGMNEIDAVLAFERHA-TSKIKSDEDLFNIT---TLGFRGEALASIAAVSKVVLQTK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G R V++G K L +K GT+V +D+F+N P RRK+++ + ++ V
Sbjct: 115 EENETFGTRLVVEGGKILEKTRCGCQK--GTSVEVKDVFFNTPARRKFLKRPSTEAMY-V 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFL--DEVNAN 235
+ V R+ L +P +SFK++ + + T + S +++ FG E S L E A
Sbjct: 172 TEVVTRLCLSNPGISFKYV--KDKKVQFITSGNGSIEDVILRLFGKEIHSALIFSEFEAE 229
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
D L++ + + + + S + Q+ Y+N RYV + ++ ++ SD +
Sbjct: 230 D--LKVKAFATKNFLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYVPSDRY------ 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P L L D+ P K V F D + + R IR A
Sbjct: 282 -----------PGVFLYLEINPRFIDVNIHPSKLEVKFSDDRRIFESVYRTIREAL 326
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 128/343 (37%), Gaps = 52/343 (15%)
Query: 1044 GAFKHLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLG 1103
G F +L+ + + N+ PS E F D +I S + E + N L P L
Sbjct: 283 GVFLYLEINPRFIDVNIHPSKLEVKFSDDRRIFESVYRTIREALRESN----LIPEVKLE 338
Query: 1104 AQAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKS- 1162
+ G + + P + D G + + E + I+K+
Sbjct: 339 KDLKNEEGQIGEQVKLSLPLFEVKEKTDD------------GAIFVREEVKTEEKIDKAP 386
Query: 1163 -------------CLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLS 1209
L D +++ + ++ V G +IDQHAA ERI E+L +
Sbjct: 387 KHESSSDSERNVKRLSDIRIVGTLFSTYVIVEKGDVFYIIDQHAAHERILYEKLVSQYER 446
Query: 1210 GEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI 1269
+ + V + + L +++ E + G++ F N
Sbjct: 447 VQSRQVTFPIVVE---LQPGDMEIVGQERELLYKLGYVFE-------EFGNN-------- 488
Query: 1270 TVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSL 1329
+ L VP I G + +E +++L D D SS + + AC+ A+ D+L
Sbjct: 489 -SVVLREVPVILGQPEAKKLFVEIVERLRDKDFSSKVSFKEEEI-ATMACKAAVKAMDTL 546
Query: 1330 LPSECALIVEELKQTSLCFQCAHGRPTTVPL--VNLEALHKQI 1370
+E + E+LK + C HGRP + + LE + K+I
Sbjct: 547 SENEIYKLFEDLKIAENPYTCPHGRPVIISMTKTQLEKMFKRI 589
>gi|308069370|ref|YP_003870975.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa E681]
gi|305858649|gb|ADM70437.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa E681]
Length = 724
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 170/356 (47%), Gaps = 27/356 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I L E + N + +G V+ VV+ELV N++DAG T+V V+V ++V D+
Sbjct: 1 MSKIRVLDEHIANQIAAGEVVERPASVVKELVENAIDAGGTRVDVWVEEGGLQSIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI + + RH ATSK+GH D+ T + GFRGEAL SI+ VS +E++T A
Sbjct: 61 GSGIEPEDVETAFYRH-ATSKIGHGRDLFQIT---SLGFRGEALPSIAAVSKVELLTAAG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ V++G K + +D GT R+LFYN P R KYM++ ++ H +
Sbjct: 117 DDGRARKLVIEGGKLVLH--EDAASRQGTDFTVRELFYNTPARLKYMKTIQTELGH-ISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL HP+V+F + + LL T + L ++ + +G + +
Sbjct: 174 VLYRMALSHPEVAFTL--RHNGNTLLQTLGNGDLLQVIAAIYGTSAAKSMLLLEGESLDY 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
ISGYIS P + S + +N R+V +++ L KA + L
Sbjct: 232 RISGYISRPEWTRSNRNAISTVVNGRFVRSYGLNQAL------------LKAYHTLLPIN 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
R P ++ L SL D+ P K V F + +E ++++ +++
Sbjct: 280 R-----FPLAVIQLEMHPSLVDVNVHPAKLEVRFSKETELFQLVEDSVKAVLGQQV 330
>gi|260893757|ref|YP_003239854.1| DNA mismatch repair protein MutL [Ammonifex degensii KC4]
gi|260865898|gb|ACX53004.1| DNA mismatch repair protein MutL [Ammonifex degensii KC4]
Length = 560
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 166/355 (46%), Gaps = 37/355 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
MG I L + V +G V+ VV+ELV N++DA A ++ V V + VVDDG
Sbjct: 1 MGKIKVLDPDTVSLVAAGEVVERPASVVKELVENALDAQARRITVRVEKDFGPITVVDDG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
GI D ++L RHA TSK+ D+++ T T GFRGEAL SI+ VS L + T+ G
Sbjct: 61 CGIPADEVLLAFSRHA-TSKISTARDLENIT---TLGFRGEALPSIAAVSRLTMKTREPG 116
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
G + G + L RK+ GT VV RDLFYN P RRK++ S + H
Sbjct: 117 AEEGVLVEIAGGEVL-------RKETVGAPPGTQVVVRDLFYNVPARRKFLSSWRAESSH 169
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
V + +AL P+VSF F E + + L L + +G E S L + A
Sbjct: 170 IV-DLLEHLALAWPEVSFSFWLAGRE---VFHTPGTGLLPALTAIYGAEVTSTLLPLEAG 225
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
G L++SG++ P + + Q + +N R V + L +A +F
Sbjct: 226 KGELKVSGFLGKPELARGHRRHQVIVVNRRLVKH---YGLAQAIAEAF------------ 270
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
G + P ++L L P + D+ P KT V F + VLA A++ A
Sbjct: 271 --GSLLPAGKYPFFVLFLELPPRMVDVNVHPQKTVVRFANEGEVLALCREAVKRA 323
>gi|320547649|ref|ZP_08041934.1| DNA mismatch repair protein HexB [Streptococcus equinus ATCC 9812]
gi|320447724|gb|EFW88482.1| DNA mismatch repair protein HexB [Streptococcus equinus ATCC 9812]
Length = 647
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 170/356 (47%), Gaps = 43/356 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ + L RH ATSK+ AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 61 GEGIAQEDVALSLHRH-ATSKIKSQADL---FRIRTLGFRGEAIPSIASISHFTVKTATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G + KG + E+++ VGT + +LFYN P R KYM+S ++
Sbjct: 117 DENYGTLLIAKGGEI-------EKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVN 233
H V V R++L HP+++F I+ + + T S + L I+ +G+ + E++
Sbjct: 170 HIV-DVVNRLSLAHPEIAFTLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEIS 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
D E+SGYIS P + + + + + IN RY+ ++ N
Sbjct: 226 NADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNR 266
Query: 294 GFLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
L G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 267 AILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMTLISSAI 322
>gi|237729103|ref|ZP_04559584.1| DNA mismatch repair protein mutL [Citrobacter sp. 30_2]
gi|226908832|gb|EEH94750.1| DNA mismatch repair protein mutL [Citrobacter sp. 30_2]
Length = 622
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 172/369 (46%), Gaps = 54/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQP 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ K + + + +
Sbjct: 119 EAWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIR 176
Query: 183 RIALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ D + E L C + L + IE
Sbjct: 177 RIALARFDVTINLSHNGKVVRQYRAVAADGQKERRLGAICGTP----FLEHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLRGWVADPNHTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKI 355
+ S +++
Sbjct: 326 VLSVLQQQL 334
>gi|218128456|ref|ZP_03457260.1| hypothetical protein BACEGG_00024 [Bacteroides eggerthii DSM 20697]
gi|317475718|ref|ZP_07934977.1| DNA mismatch repair protein MutL [Bacteroides eggerthii 1_2_48FAA]
gi|217989347|gb|EEC55660.1| DNA mismatch repair domain protein [Bacteroides eggerthii DSM
20697]
gi|316908101|gb|EFV29796.1| DNA mismatch repair protein MutL [Bacteroides eggerthii 1_2_48FAA]
Length = 629
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 187/384 (48%), Gaps = 47/384 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A ++ V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAGEIHVLVTDAGKTGIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSETDARLSFERHA-TSKIREASDL---FALRTMGFRGEALASIAAVAEVELKTRPAGEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRLLIAGSKV------ESQEAVSCPKGSNFSVKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP V+F + S D L +++ FG + L V+ +
Sbjct: 174 AEFERIALVHPDVAFY---LYSNDTELFNLPVMPLRQRILAVFGKKLNQQLLSVDVDTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SG+++ P S A QY ++N RY+ HK + D+++
Sbjct: 231 IKVSGFVAKPETSRKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 -----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELP-LESSR 376
A S D D ++P E SR
Sbjct: 329 FNAVPSIDFDTEGMPDIPTFEQSR 352
>gi|154494374|ref|ZP_02033694.1| hypothetical protein PARMER_03729 [Parabacteroides merdae ATCC
43184]
gi|154085818|gb|EDN84863.1| DNA mismatch repair domain protein [Parabacteroides merdae ATCC
43184]
Length = 621
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 177/370 (47%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ VV+ELV N+VDAGA + V + V+V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASVVKELVENAVDAGAGHIQVNIKDAGRTLVQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + DD + T GFRGEALASI VS +E+ T+ G
Sbjct: 65 MSETDARMAFERHA-TSKI---STADDLFSLHTMGFRGEALASIVAVSQVELRTRLKGAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V GS+ ++ + G+ ++LF+N P RRK+++S+ + + + +
Sbjct: 121 LGTHLVFSGSEL--ESVEPDACTEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFE- 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+ +V+ ++E + S +++ +G L V+A + IS
Sbjct: 178 RIALVNSQVALSLYHNDTE---IFNLPESGLRQRIVNVYGKTLNQKLLSVDAQSSLVTIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A QY ++N R++ HK + +A +
Sbjct: 235 GFVGRPDSAKKRGALQYFFVNGRFMKHPYFHKAV------------MQAYEQLIPAGEQ- 281
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P Y + + D+ P KT + F++ +P+ + A R A K A + D
Sbjct: 282 ----PNYFIYFTLDPATIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDF 337
Query: 363 DMLEDAELPL 372
D+ + ++P+
Sbjct: 338 DVEDAIDIPV 347
>gi|393785526|ref|ZP_10373676.1| DNA mismatch repair protein mutL [Bacteroides salyersiae
CL02T12C01]
gi|392662281|gb|EIY55845.1| DNA mismatch repair protein mutL [Bacteroides salyersiae
CL02T12C01]
Length = 624
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 181/378 (47%), Gaps = 46/378 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAGNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRLENEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTKLVIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP V+F +SE L + +++ FG + L V+ N
Sbjct: 174 TEFERIALVHPDVAFSLYSNDSE---LFNLPVAPLRQRILAVFGKKLNQQLLSVDVNTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SGY++ P + A QY ++N RY+ HK +
Sbjct: 231 IKLSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------------------- 268
Query: 299 KRSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ Q P +Y L + D+ P KT + F++ + + + A++ + K
Sbjct: 269 MEAYEQLIPVGEQVSYFLYFEVDPANIDVNIHPTKTEIKFENEQAIWQIVSAAVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELP 371
A S D D + ++P
Sbjct: 329 FNAVPSIDFDTEDMPDIP 346
>gi|423725444|ref|ZP_17699581.1| DNA mismatch repair protein mutL [Parabacteroides merdae
CL09T00C40]
gi|409234568|gb|EKN27396.1| DNA mismatch repair protein mutL [Parabacteroides merdae
CL09T00C40]
Length = 621
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 177/370 (47%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ VV+ELV N+VDAGA + V + V+V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASVVKELVENAVDAGAGHIQVNIKDAGRTLVQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + DD + T GFRGEALASI VS +E+ T+ G
Sbjct: 65 MSETDARMAFERHA-TSKI---STADDLFSLHTMGFRGEALASIVAVSQVELRTRLKGAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V GS+ ++ + G+ ++LF+N P RRK+++S+ + + + +
Sbjct: 121 LGTHLVFSGSEL--ESVEPDACTEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFE- 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+ +V+ ++E + S +++ +G L V+A + IS
Sbjct: 178 RIALVNSQVALSLYHNDTE---IFNLPESGLRQRIVNVYGKTLNQKLLSVDAQSSLVTIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A QY ++N R++ HK + +A +
Sbjct: 235 GFVGRPDSAKKRGALQYFFVNGRFMKHPYFHKAV------------MQAYEQLIPAGEQ- 281
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P Y + + D+ P KT + F++ +P+ + A R A K A + D
Sbjct: 282 ----PNYFIYFTLDPATIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDF 337
Query: 363 DMLEDAELPL 372
D+ + ++P+
Sbjct: 338 DVEDAIDIPV 347
>gi|449138379|ref|ZP_21773645.1| DNA mismatch repair protein MutL [Rhodopirellula europaea 6C]
gi|448882924|gb|EMB13472.1| DNA mismatch repair protein MutL [Rhodopirellula europaea 6C]
Length = 707
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 29/351 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I +LP + N + +G V+ VV+EL+ NS+DAG+T++ + + G +++ DDG G
Sbjct: 17 IRQLPAHLVNQIAAGEVIERPASVVKELLENSIDAGSTRIELSLEGGGVELIRISDDGCG 76
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ + L L HA TSKL D + +GT GFRGEALASI+ VS + I ++A G+
Sbjct: 77 MTAEQLPLAVTSHA-TSKL---PDDESLFHVGTLGFRGEALASIASVSQMTIRSRAEGQD 132
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + ++G G VGT + R+LF+N PVRRK+++ +P+ + +
Sbjct: 133 GGCQIDIRGGVIETPGPCG--CPVGTVIEVRNLFFNTPVRRKFLK-TPQTERGHIVEAFT 189
Query: 183 RIALVHPKVSFKFIDMESED-ELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
R+AL +PKV F + + E +LL T + + S FG E L + D ++I
Sbjct: 190 RLALANPKVHFVLRNGDKEMFDLLPTPRWADRIE---SFFGTEISEALIPIENQDETVQI 246
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
+GY P S QY+++N R++ + L H +A G L R
Sbjct: 247 TGYACDPSVSRGNNRMQYLFLNGRHIRD----RALQHALG--------EAYRGMLMVGRH 294
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
P L +R P + D+ P K V F D V + + + +R ++
Sbjct: 295 -----PVCFLRMRMPADMIDVNVHPAKLEVRFTDSGRVYSRLLQTLRQRFL 340
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 19/189 (10%)
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1231
QV ++++ + VIDQHA ER+ E + KVL + A L+A+Q LV +
Sbjct: 512 QVHQRYLVTQDEKGMVVIDQHALHERVLYERVCQKVLHED----ASLEAQQLLVPEPVSL 567
Query: 1232 QLLQNFAE-QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1290
+ A ++KD + + F L+Q + P + N D+
Sbjct: 568 TPAERAAALEVKDTLSRIGLEIE---DFGGETILIQ---------SYPAML-PNKPPADM 614
Query: 1291 LEFLQQLADTDGSSTTPPSVLR-VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQ 1349
L + + G P +L +L++ AC+ A+ GD L P E ++E+
Sbjct: 615 LRTVLESVMGAGRDPNPKDLLNHLLSTVACKAAVKAGDPLSPEEITSLLEQKDLYQETHH 674
Query: 1350 CAHGRPTTV 1358
C HGRPT +
Sbjct: 675 CPHGRPTAL 683
>gi|375011799|ref|YP_004988787.1| DNA mismatch repair protein MutL [Owenweeksia hongkongensis DSM
17368]
gi|359347723|gb|AEV32142.1| DNA mismatch repair protein MutL [Owenweeksia hongkongensis DSM
17368]
Length = 615
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 175/350 (50%), Gaps = 28/350 (8%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
I LP++V N + +G V+ V+EL+ NS+DAGA + + + ++V+D+G+
Sbjct: 4 VIRLLPDSVANQIAAGEVVQRPASAVKELLENSIDAGADHITLIIKDAGKTLMQVIDNGT 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+S + ERHA TSK+ +D I T GFRGEALASI+ V+ +E+ TK
Sbjct: 64 GMSETDARMAFERHA-TSKI---QKAEDIFAIHTKGFRGEALASIAAVAQVELKTKKEDE 119
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
G ++GSK + + ++ GT + ++LF+N P RR +++S+ ++ H + +
Sbjct: 120 ELGVMLRVEGSKVMEQEYCNTKR--GTQLEVKNLFFNIPARRNFLKSNNVELRHIIDEFE 177
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
R+AL HP + F F++ +E L ++ +++ FG + L V+ L++
Sbjct: 178 -RVALAHPDIHFSFVNNGNE---LFDLPAAGLRQRIVNIFGSKFNEKLVPVDEETPILKL 233
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
+G+I P S + Q+ + N+RY+ +H+ + C+ A G L
Sbjct: 234 TGFICKPEFSKKTRGEQFFFANNRYIRNNYLHRAV--------CN----AFEGLL----- 276
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+ P+Y L + + D+ P KT + F+D + I A++ A
Sbjct: 277 TEGSHPSYFLFMDIDPAKIDVNIHPTKTEIKFEDERSIFTIIRTAVKHAL 326
>gi|20807805|ref|NP_622976.1| DNA mismatch repair protein [Thermoanaerobacter tengcongensis MB4]
gi|25090753|sp|Q8RA70.1|MUTL_THETN RecName: Full=DNA mismatch repair protein MutL
gi|20516363|gb|AAM24580.1| DNA mismatch repair enzyme (predicted ATPase) [Thermoanaerobacter
tengcongensis MB4]
Length = 590
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 172/356 (48%), Gaps = 35/356 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I+ L E N + +G V+ +V+ELV NS+DAG+ + V + G+ Y+KV
Sbjct: 1 MNKIHLLDEKTVNKIAAGEVVERPASIVKELVENSIDAGSKNITVEILEGGIP--YIKVT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
DDG G++ VL ERHA TSK+ D+ + T T GFRGEALASI+ VS + + TK
Sbjct: 59 DDGCGMNEIDAVLAFERHA-TSKIRSDEDLFNIT---TLGFRGEALASIAAVSKVVLQTK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G R V++G K L +K GT+V +D+F+N P RRK+++ + ++ V
Sbjct: 115 EENETFGTRLVVEGGKILEKTRCGCQK--GTSVEVKDVFFNTPARRKFLKRPSTEAMY-V 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFL--DEVNAN 235
+ V R+ L +P +SFK++ + + T + S +++ FG E S L E A
Sbjct: 172 TEVVTRLCLSNPGISFKYV--KDKKVQFITSGNGSIEDVILRLFGKEVHSALIFSEFEAE 229
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
D L++ + + + + S + Q+ Y+N RYV + ++ ++ SD +
Sbjct: 230 D--LKVKAFATKNFLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYVPSDRY------ 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P L L D+ P K V F D + + R IR A
Sbjct: 282 -----------PGVFLYLEINPRFIDVNIHPSKLEVKFSDDRRIFESVYRTIREAL 326
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 128/343 (37%), Gaps = 52/343 (15%)
Query: 1044 GAFKHLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLG 1103
G F +L+ + + N+ PS E F D +I S + E + N L P L
Sbjct: 283 GVFLYLEINPRFIDVNIHPSKLEVKFSDDRRIFESVYRTIREALRESN----LIPEVKLE 338
Query: 1104 AQAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKS- 1162
+ G + + P + D G + + E + I+K+
Sbjct: 339 KDLKNEEGQIGEQVKLSLPLFEVKEKTDD------------GAIFVREEVKTEEKIDKAP 386
Query: 1163 -------------CLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLS 1209
L D +++ + ++ V G +IDQHAA ERI E+L +
Sbjct: 387 KHESSSDSERNVKRLSDIRIVGTLFSTYVIVEKGDVFYIIDQHAAHERILYEKLVSQYER 446
Query: 1210 GEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI 1269
+ + V + + L +++ E + G++ F N
Sbjct: 447 VQSRQVTFPIVVE---LQPGDMEIVGQERELLYKLGYVFE-------EFGNN-------- 488
Query: 1270 TVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSL 1329
+ L VP I G + +E +++L D D SS + + AC+ A+ D+L
Sbjct: 489 -SVVLREVPVILGQPEAKKLFVEIVERLRDKDFSSKVSFKEEEI-ATMACKAAVKAMDTL 546
Query: 1330 LPSECALIVEELKQTSLCFQCAHGRPTTVPL--VNLEALHKQI 1370
+E + E+LK + C HGRP + + LE + K+I
Sbjct: 547 SENEIYKLFEDLKIAENPYTCPHGRPVIISMTKTQLEKMFKRI 589
>gi|217970237|ref|YP_002355471.1| DNA mismatch repair protein MutL [Thauera sp. MZ1T]
gi|217507564|gb|ACK54575.1| DNA mismatch repair protein MutL [Thauera sp. MZ1T]
Length = 628
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 171/349 (48%), Gaps = 32/349 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I+RL + + N + +G V+ V++E++ N+VDAGA + V + ++V DD
Sbjct: 1 MPHIHRLSDLLVNQIAAGEVVERPASVLKEILENAVDAGARAIEVQLEQGGVRRIRVADD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+RD L L ERHA TSK+ A +DD +GT GFRGEALA+I+ V+ I ++A
Sbjct: 61 GCGIARDELALALERHA-TSKI---ATLDDLERVGTMGFRGEALAAIAAVARTGITSRAE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + +R + G + +D GT V DL+YN P RRK++++ + H
Sbjct: 117 GASHAWR-IEAGREPEPAALDQ-----GTVVDVADLYYNTPARRKFLKTESTEFAH-CDD 169
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
R+AL P + + + ++ S P A + + G + EV A+ G L
Sbjct: 170 MFRRVALARPDIGLQ---LAHNGRVIHRLPPSPPAARVAALMGDDFLQHAREVQADAGIL 226
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++G+ S P S + + QY ++N R+V KLL H +A L G
Sbjct: 227 RLAGFASLPAYSRASRDAQYFFVNGRFVRD----KLLAHAV--------REAYADILHGA 274
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
R PAY+L L + D+ P K V F++ V F+ A+R
Sbjct: 275 RH-----PAYVLFLELDPAGVDVNVHPAKIEVRFRESRAVHQFVFHAVR 318
>gi|212212503|ref|YP_002303439.1| DNA mismatch repair protein [Coxiella burnetii CbuG_Q212]
gi|226723030|sp|B6J016.1|MUTL_COXB2 RecName: Full=DNA mismatch repair protein MutL
gi|212010913|gb|ACJ18294.1| MutL [Coxiella burnetii CbuG_Q212]
Length = 575
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 175/370 (47%), Gaps = 45/370 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + N + +G V+ VV+EL+ NS+DA A+ + V + +++ DD
Sbjct: 1 MMYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + LVL ERHA TSK+ + D+ D T T GFRGEALASIS VS L + ++
Sbjct: 61 GDGIHPEDLVLALERHA-TSKIAKIDDLQDVT---TLGFRGEALASISAVSRLTLTSRQK 116
Query: 120 GRPNGYR------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
GYR K+M + GTT+ +DLFYN P RRK+++ SP
Sbjct: 117 NAEMGYRISNISHKIMTPVPAAH--------PQGTTIDVQDLFYNTPARRKFLR-SPATE 167
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 233
+++ + R+AL H + +F+ +E E++ S+++ I F+
Sbjct: 168 FQHIRRIIERLALSH--FTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSAL 225
Query: 234 A---NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWK 290
A + L + GYI+ + S QY+Y+N R+V I + L A D
Sbjct: 226 AIEFSQSGLTLKGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQ--AYHDV----- 278
Query: 291 ANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
G+ PAY+L L + D+ P K V F+D + V F+ A+++A
Sbjct: 279 ----LFHGRH------PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTA 328
Query: 351 WMKK---IAH 357
+ IAH
Sbjct: 329 LAQTKPGIAH 338
>gi|421846108|ref|ZP_16279258.1| DNA mismatch repair protein [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|411772552|gb|EKS56157.1| DNA mismatch repair protein [Citrobacter freundii ATCC 8090 = MTCC
1658]
Length = 621
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 172/369 (46%), Gaps = 54/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQP 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ K + + + +
Sbjct: 119 EAWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIR 176
Query: 183 RIALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ D + E L C + L + IE
Sbjct: 177 RIALARFDVTINLSHNGKVVRQYRAVAADGQKERRLGAICGTP----FLEHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLRGWVADPNHTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKI 355
+ S +++
Sbjct: 326 VLSVLQQQL 334
>gi|334131725|ref|ZP_08505487.1| DNA mismatch repair protein MutL [Methyloversatilis universalis
FAM5]
gi|333443198|gb|EGK71163.1| DNA mismatch repair protein MutL [Methyloversatilis universalis
FAM5]
Length = 596
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 170/356 (47%), Gaps = 32/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+ + + + +G V+ V++EL+ NS+DAG+ + V + ++V DD
Sbjct: 1 MPAIRLLPDLLISQIAAGEVVERPASVLKELLENSLDAGSRDIRVQLEAGGVKRLRVADD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R+ L L RHA TSK+ A +DD + T GFRGEALASI+ V+ + I ++
Sbjct: 61 GCGMPREDLPLALARHA-TSKI---ASLDDLEAVATMGFRGEALASIASVARVSITSRET 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + +R +G ++ D GT V DL+YN P RRK++++ + H
Sbjct: 117 GSAHAWRIDNEGE------VEPAALDAGTVVDVADLYYNTPARRKFLRTEQTEYGHC-DD 169
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
RIAL P+V+F+ + + L +S + L+ G E V A+ G +
Sbjct: 170 VFGRIALSVPQVAFQLMHNGRLMQRLPAGDMASRVRALL---GDEFMQHARPVEADAGQI 226
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+SG+ + P S + + QY ++N R+V +LL H +A L G
Sbjct: 227 RVSGFAAQPAFSRAGRDAQYCFVNGRFVRD----RLLAHAL--------REAYADVLHGA 274
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
R PAY++ + D+ P KT V F+D V F+ A+ A I
Sbjct: 275 RH-----PAYVVFIELDPRAVDVNVHPAKTEVRFRDSRGVHQFVFHAVERALAPSI 325
>gi|423343085|ref|ZP_17320799.1| DNA mismatch repair protein mutL [Parabacteroides johnsonii
CL02T12C29]
gi|409216761|gb|EKN09744.1| DNA mismatch repair protein mutL [Parabacteroides johnsonii
CL02T12C29]
Length = 621
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 177/370 (47%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ VV+ELV N+VDAGA + V + V+V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASVVKELVENAVDAGAGHIQVNIKDAGRTLVQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + DD + T GFRGEALASI VS +E+ T+ G
Sbjct: 65 MSETDARMAFERHA-TSKI---STADDLFSLHTMGFRGEALASIVAVSQVELRTRLKGAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V GS+ ++ + G+ ++LF+N P RRK+++S+ + + + +
Sbjct: 121 LGTHLVFSGSEL--ESVEPDACTEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFE- 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+ +V+ ++E + S +++ +G L V+A + IS
Sbjct: 178 RIALVNSQVALSLYHNDTE---IFNLPESGLRQRIVNVYGKTLNQKLLSVDAQSSLVTIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A QY ++N R++ HK + +A +
Sbjct: 235 GFVGRPDSAKKRGALQYFFVNGRFMKHPYFHKAV------------MQAYEQLIPAGEQ- 281
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P Y + + D+ P KT + F++ +P+ + A R A K A + D
Sbjct: 282 ----PNYFIYFTLDPATIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDF 337
Query: 363 DMLEDAELPL 372
D+ + ++P+
Sbjct: 338 DVEDAIDIPV 347
>gi|209363988|ref|YP_001424550.2| DNA mismatch repair protein [Coxiella burnetii Dugway 5J108-111]
gi|207081921|gb|ABS76590.2| DNA mismatch repair protein [Coxiella burnetii Dugway 5J108-111]
Length = 575
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 175/370 (47%), Gaps = 45/370 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + N + +G V+ VV+EL+ NS+DA A+ + V + +++ DD
Sbjct: 1 MMYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + LVL ERHA TSK+ A +DD I T GFRGEALASIS VS L + ++
Sbjct: 61 GDGIHPEDLVLALERHA-TSKI---AKIDDLQDITTLGFRGEALASISAVSRLTLTSRQK 116
Query: 120 GRPNGYR------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
GYR K+M + GTT+ +DLFYN P RRK+++ SP
Sbjct: 117 NAEMGYRISNISHKIMTPVPAAH--------PQGTTIDVQDLFYNTPARRKFLR-SPATE 167
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 233
+++ + R+AL H + +F+ +E E++ S+++ I F+
Sbjct: 168 FQHIRRIIERLALSH--FTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSAL 225
Query: 234 A---NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWK 290
A + L + GYI+ + S QY+Y+N R+V I + L A D
Sbjct: 226 AIEFSQSGLTLKGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQ--AYHDV----- 278
Query: 291 ANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
G+ PAY+L L + D+ P K V F+D + V F+ A+++A
Sbjct: 279 ----LFHGRH------PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTA 328
Query: 351 WMKK---IAH 357
+ IAH
Sbjct: 329 LAQAKPGIAH 338
>gi|344199651|ref|YP_004783977.1| DNA mismatch repair protein mutL [Acidithiobacillus ferrivorans
SS3]
gi|343775095|gb|AEM47651.1| DNA mismatch repair protein mutL [Acidithiobacillus ferrivorans
SS3]
Length = 597
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 175/347 (50%), Gaps = 26/347 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
++RL + N + +G V+ +++EL+ NS+DAGAT++ +++ G + V DDG G
Sbjct: 9 VHRLDSTLANQIAAGEVVERPASILKELLENSLDAGATRITIHLEGGGVDLLSVEDDGVG 68
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I L L ERHA TSK+ A +D I T GFRGEAL +I+ VS LEI+++AHG+
Sbjct: 69 IFPADLALAMERHA-TSKV---ATWEDLQAIHTMGFRGEALPAIASVSRLEIVSRAHGQK 124
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
R + G + + GTTV DLF+N P RRK+++S+ + L +K +
Sbjct: 125 QATRLQVTGGAT--GAPEPSGRAPGTTVRVADLFFNVPARRKFLRSASAE-LSRNQKVLR 181
Query: 183 RIALVHPKVSFK-FIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
+IAL + V+F+ F + + +L + S + S G + + D L +
Sbjct: 182 QIALANFPVAFQLFQNGRALVQLPAALDADSRAQRVASIMGEGFLANALYIEQEDQGLSL 241
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
SG++ P + + QY Y+NSR V + P+ + + L AS+ N+ + +
Sbjct: 242 SGWLGLPTYNRARGDEQYFYVNSRPV-RDPV--ITHALRASY--------NDVLFQDRH- 289
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P Y+L L+ P D+ P K V F+D + F+ +R
Sbjct: 290 -----PLYVLYLKLPPERVDVNVHPAKAEVRFRDSREIHDFLFHTLR 331
>gi|423335912|ref|ZP_17313663.1| DNA mismatch repair protein HexB [Lactobacillus reuteri ATCC 53608]
gi|337729115|emb|CCC04238.1| DNA mismatch repair protein HexB [Lactobacillus reuteri ATCC 53608]
Length = 668
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 181/374 (48%), Gaps = 35/374 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L + N + +G V+ +V+ELV NS+DA + +V + V V+V+DD
Sbjct: 1 MGKIHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + + L RH ATSK+ D+ + T GFRGEAL SI+ V+ + + T
Sbjct: 61 GDGIAAEDISLAFHRH-ATSKINSRHDL---FKVQTMGFRGEALPSIASVADVTLTTAQA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G+ G ++G K L + R+ GT + DLF+N P R KY++ SP+ L +
Sbjct: 117 GQEEGTMIHLRGGKELVVKPAGARQ--GTDIKVTDLFFNTPARLKYLK-SPQTELTRITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL +P V+F F + EL + +++ ++ + +G++ + E++ D
Sbjct: 174 IINRLALANPAVAFSF--THNGRELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++SG++S P + + + + + IN RY+ +++ ++G
Sbjct: 232 KVSGFVSLPELTRASRQYITITINHRYIR-------------------NFELTKAIIQGY 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++N+ L D+ P K V + ++ I IR K+IA
Sbjct: 273 ESKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLMKLIAETIR----KRIAV 328
Query: 358 DSFDVDMLEDAELP 371
++ D+ D +P
Sbjct: 329 ENLIPDVDADQFIP 342
>gi|238750069|ref|ZP_04611572.1| DNA mismatch repair protein mutL [Yersinia rohdei ATCC 43380]
gi|238711613|gb|EEQ03828.1| DNA mismatch repair protein mutL [Yersinia rohdei ATCC 43380]
Length = 632
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 192/381 (50%), Gaps = 37/381 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
IS+D L L RH ATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISKDDLALALARH-ATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAQQN 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTC-SSSSPLALLISSFGIEDFSFLDEVNA---NDGA 238
RIAL V+ I++ +L+ +++ P I +FL + A G
Sbjct: 177 RIALARFDVA---INLSHNGKLMRQYRAATDPSQHERRLASICGPAFLQQALAISWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S ++ QY Y+N+R + +L+NH +A LK
Sbjct: 234 LTIRGWVADPAASRTLSEMQYCYVNNRMMRD----RLINHAIR--------QAYQDLLKD 281
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 282 DQQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQAAT 334
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+++ ED E +E+ R+Q
Sbjct: 335 PVLNIN--EDGE-EIEAPRWQ 352
>gi|421875810|ref|ZP_16307392.1| DNA mismatch repair protein mutL [Brevibacillus laterosporus GI-9]
gi|372455217|emb|CCF16941.1| DNA mismatch repair protein mutL [Brevibacillus laterosporus GI-9]
Length = 752
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 169/351 (48%), Gaps = 27/351 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E V N + +G V+ VV+ELV N++DAG ++V +++ +++VD+
Sbjct: 1 MGKIQVLTEQVSNMIAAGEVVERPASVVKELVENAIDAGTSQVEIHIEEGGLQLIRIVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R+ + ERH ATSK+ D+ I + GFRGEALASI+ VS +E+++
Sbjct: 61 GVGMDREDCLRAFERH-ATSKIRSARDL---FHIRSLGFRGEALASIASVSRIELMSAED 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + V+ G ++D + GT +V RDLF+N P R KYM+S +V H V
Sbjct: 117 SGQVGTKVVIDGGDM--KSVEDLARVKGTEIVVRDLFFNTPARLKYMRSISTEVGH-VSD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+A+ +PK++F + LL T L ++ + +G++ L
Sbjct: 174 YVNRLAITYPKIAFTLT--HNGKNLLQTSGDGKLLHVMAAIYGVQVAKQLLPFEGETLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
SG +S + + + + +N RYV P+ + + + + FL
Sbjct: 232 RWSGLLSKTEVTRANRTYISTLVNGRYVRNYPLSQAI------------MRGYHTFLPIG 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
R P +++ L D+ P K V F + + A +E++++ A
Sbjct: 280 R-----FPIVAMHIEMDPILVDVNVHPAKLEVRFSKEQELCAAVEQSVKEA 325
>gi|218961589|ref|YP_001741364.1| DNA mismatch repair protein MutL [Candidatus Cloacamonas
acidaminovorans]
gi|167730246|emb|CAO81158.1| DNA mismatch repair protein MutL [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 630
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 200/437 (45%), Gaps = 62/437 (14%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L E VRN + +G V+ VV+ELV N++DAGA + V + ++V+D+
Sbjct: 1 MPNIHILAEDVRNKIAAGEVIERPASVVKELVENAIDAGADSIIVAIENGGKDLIRVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ D +L ERH+ TSK+ ++D T IG+ GFRGEAL SI+ VS L ++T+
Sbjct: 61 GCGMNADDAMLAFERHS-TSKI---KTVEDITHIGSLGFRGEALPSIASVSKLHLVTRTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+++ + + ++GT V R LF + P RRK+++++P + H +K
Sbjct: 117 EEEMA--TIVEYANGKLNNVTKTSANIGTAVTVRGLFKDLPARRKFLKTAPVEARHIIKY 174
Query: 180 CVLRIALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ ALV+P++SF+ + D E + + C + S F F D+V +G
Sbjct: 175 IHYQ-ALVYPQISFRLVIDDKEKLNYIACPERKQRIEEVFGSGF------FADDVIPVEG 227
Query: 238 ALE---ISGYISSPYDSI-SVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+SGYI D + QY +IN RY+ + + F
Sbjct: 228 KYNDYSVSGYIFGLEDRADKLIDAQYTFINGRYIFDKTVRHSIKAAYEPF---------- 277
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRS 349
LK + + P Y+L L P D+ P K V F++ VL + +A+R+
Sbjct: 278 -ILKTRAWQKGTTPPYILFLEIPPEQIDVNVHPAKLEVRFRENNLVHSLVLETLTKALRN 336
Query: 350 AWMKKIAH--------------DSFDVDM-LEDAELP------------LESSRFQSHQS 382
+K A S + D+ +++ E+P + F+S QS
Sbjct: 337 YEDQKFASARSKFQGGGKGEKVTSLERDIFVKNIEVPRFSAYKKEFGNLFQDDLFRSEQS 396
Query: 383 STHLHSSPLKNLAKQRD 399
ST P+ N A++ +
Sbjct: 397 STSPKDMPIFNPAQEEN 413
>gi|218262303|ref|ZP_03476817.1| hypothetical protein PRABACTJOHN_02491 [Parabacteroides johnsonii
DSM 18315]
gi|218223454|gb|EEC96104.1| hypothetical protein PRABACTJOHN_02491 [Parabacteroides johnsonii
DSM 18315]
Length = 621
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 177/370 (47%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ VV+ELV N+VDAGA + V + V+V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASVVKELVENAVDAGAGHIQVNIKDAGRTLVQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + DD + T GFRGEALASI VS +E+ T+ G
Sbjct: 65 MSETDARMAFERHA-TSKI---STADDLFSLHTMGFRGEALASIVAVSQVELRTRLKGAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V GS+ ++ + G+ ++LF+N P RRK+++S+ + + + +
Sbjct: 121 LGTHLVFSGSEL--ESVEPDACTEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFE- 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+ +V+ ++E + S +++ +G L V+A + IS
Sbjct: 178 RIALVNSQVALSLYHNDTE---IFNLPESGLRQRIVNVYGKTLNQKLLSVDAQSSLVTIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A QY ++N R++ HK + +A +
Sbjct: 235 GFVGRPDSAKKRGALQYFFVNGRFMKHPYFHKAV------------MQAYEQLIPAGEQ- 281
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P Y + + D+ P KT + F++ +P+ + A R A K A + D
Sbjct: 282 ----PNYFIYFTLDPATIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDF 337
Query: 363 DMLEDAELPL 372
D+ + ++P+
Sbjct: 338 DVEDAIDIPV 347
>gi|339009510|ref|ZP_08642082.1| DNA mismatch repair protein MutL [Brevibacillus laterosporus LMG
15441]
gi|338773988|gb|EGP33519.1| DNA mismatch repair protein MutL [Brevibacillus laterosporus LMG
15441]
Length = 752
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 169/351 (48%), Gaps = 27/351 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E V N + +G V+ VV+ELV N++DAG ++V +++ +++VD+
Sbjct: 1 MGKIQVLTEQVSNMIAAGEVVERPASVVKELVENAIDAGTSQVEIHIEEGGLQLIRIVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R+ + ERH ATSK+ D+ I + GFRGEALASI+ VS +E+++
Sbjct: 61 GVGMDREDCLRAFERH-ATSKIRSARDL---FHIRSLGFRGEALASIASVSRIELMSAED 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + V+ G ++D + GT +V RDLF+N P R KYM+S +V H V
Sbjct: 117 SGQVGTKVVIDGGDM--KSVEDLARVKGTEIVVRDLFFNTPARLKYMRSISTEVGH-VSD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+A+ +PK++F + LL T L ++ + +G++ L
Sbjct: 174 YVNRLAITYPKIAFTLT--HNGKNLLQTSGDGKLLHVMAAIYGVQVAKQLLPFEGETLDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
SG +S + + + + +N RYV P+ + + + + FL
Sbjct: 232 RWSGLLSKTEVTRANRTYISTLVNGRYVRNYPLSQAI------------MRGYHTFLPIG 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
R P +++ L D+ P K V F + + A +E++++ A
Sbjct: 280 R-----FPIVAMHIEMDPILVDVNVHPAKLEVRFSKEQELCAAVEQSVKEA 325
>gi|448633065|ref|ZP_21674063.1| DNA mismatch repair protein MutL [Haloarcula vallismortis ATCC
29715]
gi|445752422|gb|EMA03846.1| DNA mismatch repair protein MutL [Haloarcula vallismortis ATCC
29715]
Length = 717
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 163/370 (44%), Gaps = 41/370 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + + +G V+ VV+ELV N++DA A +V V V ++V DD
Sbjct: 1 MTDIQRLDDRTVERIAAGEVVERPASVVKELVENAIDADANRVEVVVEAGGTDGIRVTDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ RD + E+H TSK+ +AD++ G+GT GFRGEAL +I VS L + T+
Sbjct: 61 GVGMDRDAVKTAVEKHT-TSKIRDIADLE--GGVGTLGFRGEALHAIGAVSRLTVRTRPR 117
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G V++G +G + GTT+ DLFYN P RRKY++ + H V
Sbjct: 118 GGDVGTELVLEGGDVTSVGPAGCPE--GTTIAVEDLFYNVPARRKYLKQESTEFAH-VNT 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN---- 235
V AL +P V+ + E T ++S +G E + V A
Sbjct: 175 VVASYALANPDVAVSL--THGDRETFSTTGQGDLRETVMSVYGREVAESMISVGAGSGAN 232
Query: 236 ----------DGALE-ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFD 284
DG L+ + G +S P + + + + Y+N RYV G + A D
Sbjct: 233 AGDDETDSFPDGPLDGVHGLVSHPETNRAGREYLSTYVNGRYVRAGTVRD------AVID 286
Query: 285 CSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIE 344
+ A + + P +L L P D+ P K V F D E V +
Sbjct: 287 AYGTQIAPDRY-----------PFAVLFLDVPAGDVDVNVHPRKLEVRFADDEGVREQVR 335
Query: 345 RAIRSAWMKK 354
A+ A +++
Sbjct: 336 TAVEDALLRE 345
Score = 41.2 bits (95), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 1156 PDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSV 1215
P++ ++S L ++L Q+ ++ L ++DQHAADER+ E L+ K GE +
Sbjct: 509 PEATHES-LPSMRILGQLADTYVVAETDDGLVLVDQHAADERVNYERLKAK-FEGETTTQ 566
Query: 1216 AYLD-AEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI-TVIT 1273
A D E EL E ++ ++ + G+ HT +R+ +++ + R + VI
Sbjct: 567 ALADPVELELTAREA--EVFDRRSDALASLGF----HT--ARTGERSVEV--RTLPGVIA 616
Query: 1274 LLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSE 1333
+A P I + DV L F+ D + ++T + +L AC ++ SL
Sbjct: 617 DVAGPDI----VRDV-LGAFV--AGDDEAAATVEAAADELLGDLACYPSVTGNTSLTEGS 669
Query: 1334 CALIVEELKQTSLCFQCAHGRPTTV 1358
++ L + + C HGRPT +
Sbjct: 670 VRELLAALDECENPYACPHGRPTVI 694
>gi|365104308|ref|ZP_09333969.1| DNA mismatch repair protein mutL [Citrobacter freundii 4_7_47CFAA]
gi|363644921|gb|EHL84202.1| DNA mismatch repair protein mutL [Citrobacter freundii 4_7_47CFAA]
Length = 624
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 172/369 (46%), Gaps = 54/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQP 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ K + + + +
Sbjct: 119 EAWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIR 176
Query: 183 RIALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ D + E L C + L + IE
Sbjct: 177 RIALARFDVTINLSHNGKVVRQYRAVAADGQKERRLGAICGTP----FLEHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLRGWVADPNHTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKI 355
+ S +++
Sbjct: 326 VLSVLQQQL 334
>gi|319954280|ref|YP_004165547.1| DNA mismatch repair protein mutl [Cellulophaga algicola DSM 14237]
gi|319422940|gb|ADV50049.1| DNA mismatch repair protein MutL [Cellulophaga algicola DSM 14237]
Length = 617
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 183/373 (49%), Gaps = 36/373 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGA--TKVFVYVGVCNCYVKVVDDGS 61
I LP+ V N + +G V+ VV+EL+ N++DAGA K+ + G ++VVD+G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGADAIKLIIKDG-GKALIQVVDNGV 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+S L ERHA TSK+ DD + T GFRGEALASI+ ++ +E++T+
Sbjct: 64 GMSATDARLSFERHA-TSKI---KSADDLFCLHTKGFRGEALASIAAIAHVELLTRTATD 119
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + ++GSK I + V GT+ ++LF+N P RR +++S+ + H +
Sbjct: 120 EIGVQLKVEGSK-----ISSQEPTVTPKGTSFCVKNLFFNIPARRNFLKSNQVEFRH-IT 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
R+AL HP + F F + SE + S+ +++ FG + L V
Sbjct: 174 DEFHRVALAHPDIQFHFYNNGSE---IFHLPKSNYRQRIVNVFGAKTNEKLVPVEEETQV 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ISG+IS P S + Q+ ++N+R++ K P L+H S A G +
Sbjct: 231 VKISGFISKPEFSKKSRGEQFFFVNNRFI-KSP---YLHHAVVS--------AFEGLI-- 276
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
KS+ P Y L L + D+ P KT + F D V A + AI+ A +
Sbjct: 277 ---KSENHPGYFLYLDVDPASIDINIHPTKTEIKFDDEHTVYALLRSAIKHALGQFNVVP 333
Query: 359 SFDVDMLEDAELP 371
+ D + ++ E P
Sbjct: 334 ALDFEADQNLETP 346
>gi|374995725|ref|YP_004971224.1| DNA mismatch repair protein MutL [Desulfosporosinus orientis DSM
765]
gi|357214091|gb|AET68709.1| DNA mismatch repair protein MutL [Desulfosporosinus orientis DSM
765]
Length = 650
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 166/343 (48%), Gaps = 29/343 (8%)
Query: 13 NTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSGISRDGLVLL 71
N + +G V+ VV+ELV NS+DAGA + + + G ++V DDGSGI R L L
Sbjct: 14 NQIAAGEVVERPASVVKELVENSLDAGAKHIDITIEGNGVPLIRVRDDGSGIGRADLPLA 73
Query: 72 GERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKG 131
RHA TSK+ + D+D + T GFRGEAL SI+ VS EI ++ G +KG
Sbjct: 74 VIRHA-TSKITQIEDLDH---LQTLGFRGEALPSIASVSHFEISSRPEYEEAGLSFTLKG 129
Query: 132 SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKV 191
+ G+ + VGT+V RDLF+N P R K+++S+ + + V RIAL HP++
Sbjct: 130 GE--EEGLTEIGCPVGTSVTVRDLFFNTPARLKFLKSTATE-FGLISDTVGRIALAHPEI 186
Query: 192 SFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGALEISGYISSPYD 250
+ I + +++ + L I + G + L + +D + G+IS P
Sbjct: 187 A---ISLTHPQQVVLQTTGRGDLREAIGAVIGYDLARQLIPIQMSDEKWRLEGFISPPNL 243
Query: 251 SISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYL 310
S K Q+ +N R + + P+ L LA + K + P +
Sbjct: 244 VRSSKQAQFFMVNGR-IIRSPL--LSRALAEGYHTLIPAKHH--------------PIAV 286
Query: 311 LNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
L++ P S YD+ P K V FKD + FI A+ +A ++
Sbjct: 287 LHVSLPPSEYDVNVHPTKMDVRFKDEAGLSQFIREAVNAALLR 329
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 82/203 (40%), Gaps = 33/203 (16%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP-- 1227
L Q+ +I G L +IDQHAA ERI E L + + S Q L++P
Sbjct: 465 LTQLFNTYILATDGKILTIIDQHAAHERINYERLLREFKEADQPS-------QVLLIPIP 517
Query: 1228 -EIGYQLLQNFAEQIKDWGWICN-----IHTQGSRSFNKNLNLLQRQITVITLLAVPCIF 1281
E Q Q E + WI N + GSR++ L +P
Sbjct: 518 MEFTVQEEQVLLENL----WILNEMGFILEQFGSRTY--------------LLRGIPVQT 559
Query: 1282 GVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEEL 1341
G +D L +F++++ + T + + AC+ +I DSL E ++ L
Sbjct: 560 GNFPADELLRQFIEEVLIKNSPPTFDKMIEEWIYMLACKESIKARDSLNTHEMEQLIAAL 619
Query: 1342 KQTSLCFQCAHGRPTTVPLVNLE 1364
+T + C HGRPT V + E
Sbjct: 620 GRTHNPYTCPHGRPTMVTMTRSE 642
>gi|424899665|ref|ZP_18323207.1| DNA mismatch repair protein MutL [Prevotella bivia DSM 20514]
gi|388591865|gb|EIM32104.1| DNA mismatch repair protein MutL [Prevotella bivia DSM 20514]
Length = 647
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 174/371 (46%), Gaps = 30/371 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGAT--KVFVYVGVCNCYVKVVDDGS 61
I LP++V N + +G V+ V++EL+ NSVDAGAT KV V V ++VVD+G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELIENSVDAGATIIKVLV-VDAGRTSIQVVDNGK 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+S L ERH ATSK + DD + T GFRGEALASI+ V+ +E+ T+ G
Sbjct: 64 GMSEIDARLSFERH-ATSK---IRKADDLFSLHTMGFRGEALASIAAVAQVELKTRIEGD 119
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
G + G ++G + + VG+ + +LF+N P RRK+++S+ + L+++
Sbjct: 120 ELGCHLSISGGS--FVGQEPCQCAVGSNFLIENLFFNVPARRKFLKSNTTE-LNNIITAF 176
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
RIALV+P ++F ++E L CS ++ FG L V I
Sbjct: 177 QRIALVYPSITFTLHSNDTEMFNLHACSFKQR---IVEIFGKRLSHELLPVEVETTLCNI 233
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
G++ P S A QY+++N RY+ HK + A +
Sbjct: 234 HGFVGKPESSKKKGAHQYLFVNDRYMKHPYFHKAI------------MSAYERLIPQGEQ 281
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFD 361
S Y + P D+ P KT + F++ + + + A+R A K + D
Sbjct: 282 VS-----YFIYFNVPAEDIDVNIHPTKTEIKFENEQAIWQILMAAVRDAIGKFHDVSAID 336
Query: 362 VDMLEDAELPL 372
D ++P+
Sbjct: 337 FDTEGRPDIPV 347
>gi|374323832|ref|YP_005076961.1| DNA mismatch repair protein mutL [Paenibacillus terrae HPL-003]
gi|357202841|gb|AET60738.1| DNA mismatch repair protein mutL [Paenibacillus terrae HPL-003]
Length = 704
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 170/356 (47%), Gaps = 27/356 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I L E + N + +G V+ VV+ELV N++DAG T+V V+V ++V D+
Sbjct: 1 MSKIRVLDEHIANQIAAGEVVERPASVVKELVENAIDAGGTRVDVWVEEGGLQSIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI + + RH ATSK+GH D+ T + GFRGEAL SI+ VS +E++T A
Sbjct: 61 GSGIEPEDVETAFYRH-ATSKIGHGRDLFQIT---SLGFRGEALPSIAAVSKVELLTAAG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ V++G K + +D GT R+LFYN P R KYM++ ++ H +
Sbjct: 117 DDGRARKLVIEGGKLVLH--EDAAARQGTDFTVRELFYNTPARLKYMKTIQTELGH-ISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL HP+V+F + + LL T + L ++ + +G + +
Sbjct: 174 VLYRMALSHPEVAFTL--RHNGNTLLQTLGNGDLLQVIAAVYGTSAAKSMLLLEGESLDY 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
ISGY+S P + S + +N R+V +++ L KA + L
Sbjct: 232 RISGYVSRPEWTRSNRNAISTVVNGRFVRSYGLNQAL------------LKAYHTLLPIN 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
R P ++ L SL D+ P K V F + +E +I++ +++
Sbjct: 280 R-----FPLAVIQLEMHPSLVDVNVHPAKLEVRFSKEAELFQLVEDSIKAVLGQQV 330
>gi|293393216|ref|ZP_06637531.1| DNA mismatch repair protein MutL [Serratia odorifera DSM 4582]
gi|291424362|gb|EFE97576.1| DNA mismatch repair protein MutL [Serratia odorifera DSM 4582]
Length = 627
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 170/350 (48%), Gaps = 33/350 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + L L RHA TSK+ + +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IGKADLALALARHA-TSKI---STLDDLEAIVSLGFRGEALASISSVSRLTLTSRTAEQP 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + VG+TV DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEGRDQAVM-VKPAAHPVGSTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDEVNA---NDGA 238
RIAL V+ I++ +L+ ++ + G I +FL A G
Sbjct: 177 RIALARFDVA---INLSHNGKLMRQYRAAKEESQHERRLGSICGPAFLQHALAISWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P + + QY Y+NSR + +L+NH A D K +
Sbjct: 234 LTIRGWVADPAGARQLGELQYCYVNSRMMRD----RLINH-AIRQAYQDQLKDDQQ---- 284
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 285 --------PAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|357061465|ref|ZP_09122217.1| hypothetical protein HMPREF9332_01775 [Alloprevotella rava F0323]
gi|355373953|gb|EHG21256.1| hypothetical protein HMPREF9332_01775 [Alloprevotella rava F0323]
Length = 605
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 204/449 (45%), Gaps = 39/449 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVY-VGVCNCYVKVVDDGSG 62
I+ LP+ V N + +G V+ + V++ELV NS+DAGA + VY V ++V+D+G G
Sbjct: 5 IHLLPDTVANQIAAGEVIQRPSSVIKELVENSIDAGAALIQVYVVEAGKTSIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK+ +D+ + T GFRGEAL SI V+ +E+ T+ +
Sbjct: 65 MSETDARLAFERH-ATSKIREASDL---FNLCTMGFRGEALPSIVAVAQVELRTRQKDKE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERK---DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G ++G K +E+ +G + R+LF+N P RRK+++S+ + L ++ +
Sbjct: 121 LGICLQVEGGK-----FKEEQLVACPIGANFMVRNLFFNVPARRKFLKSNQTE-LSNIVQ 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
RIAL HP VSFK + S L+ S + + FG + L + A+
Sbjct: 175 EFERIALAHPAVSFK---LYSNGTLMHDLVSGNFRQRISGVFGRKMDQQLIPICADTEIA 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+I+G++ P S QY ++N R+ + H S KA
Sbjct: 232 KITGFVGCPESSRKKGVRQYFFVNGRF---------MRHPYFS-------KAVQSAFDRL 275
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
+++ P Y LN D+ P KT V F+D + + I +R A K A +
Sbjct: 276 IPENEQVP-YFLNFEVDPQRIDVNIHPTKTEVKFQDEQELWQIILAGVRDALSKFNAVPT 334
Query: 360 FDVDMLEDAELPLESSRFQSHQSSTHLHSS--PLKNLAKQRDHMFHKECERI--TFQEFQ 415
D D +LP+ Q H+ + P K A R + +E R + Q
Sbjct: 335 IDFDTDNRPQLPVFDETIPVQQPRVHIDHTFNPFKESAS-RKTSWEEEYNRAFGLNRSVQ 393
Query: 416 KDPVELAEENTEMEFFSQPKHSSSLLDGS 444
K P +EN +++ + S + G+
Sbjct: 394 KQPSLWEQENEKLQTITNDISSVTEFSGT 422
>gi|146297976|ref|YP_001192567.1| DNA mismatch repair protein MutL [Flavobacterium johnsoniae UW101]
gi|189030399|sp|A5FNH2.1|MUTL_FLAJ1 RecName: Full=DNA mismatch repair protein MutL
gi|146152394|gb|ABQ03248.1| DNA mismatch repair protein MutL [Flavobacterium johnsoniae UW101]
Length = 644
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 169/346 (48%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDA AT + + V+V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAVDAKATDIKLIIKDAGKSLVQVIDNGVG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ L RHA TSK+ D+ +GT GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MTVTDARLCFARHA-TSKIRQAEDL---FSLGTKGFRGEALASIAAIAHMEMKTKQEQDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V++GSK + + K GT+ ++LF+N P RR +++S + H V
Sbjct: 121 LGTHIVIEGSKFVSQEVAVLPK--GTSFAVKNLFFNIPARRNFLKSDTVEFRH-VMDEFQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP + F F SE L + ++S E L VN + + I
Sbjct: 178 RVALAHPNIHFSFYHNGSELYNLPAAGYRQRIVGIMSGKTNEK---LVPVNEDTEIISIQ 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + + Q+ ++N R++ G +H + + A++D G LK
Sbjct: 235 GFVCKPEFAKKNRGEQFFFVNDRFIKSGYLH---HAVMAAYD---------GLLKDG--- 279
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+ P+Y L L+ P + D+ P KT + F D + + A + +I+
Sbjct: 280 --SQPSYFLYLQVPPNTIDINIHPTKTEIKFDDEQALYAILRASIK 323
>gi|194468324|ref|ZP_03074310.1| DNA mismatch repair protein MutL [Lactobacillus reuteri 100-23]
gi|194453177|gb|EDX42075.1| DNA mismatch repair protein MutL [Lactobacillus reuteri 100-23]
Length = 668
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 181/374 (48%), Gaps = 35/374 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L + N + +G V+ +V+ELV NS+DA + +V + V V+V+DD
Sbjct: 1 MGKIHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + + L RH ATSK+ D+ + T GFRGEAL SI+ V+ + + T
Sbjct: 61 GDGIAAEDISLAFHRH-ATSKINSRHDL---FKVQTMGFRGEALPSIASVADVTLTTAQA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G+ G ++G K L + R+ GT + DLF+N P R KY++ SP+ L +
Sbjct: 117 GQEEGTMIHLRGGKELVVKPAGARQ--GTDIKVTDLFFNTPARLKYLK-SPQTELTRITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL +P V+F F + EL + +++ ++ + +G++ + E++ D
Sbjct: 174 IINRLALANPAVAFSF--THNGRELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++SG++S P + + + + + IN RY+ +++ ++G
Sbjct: 232 KVSGFVSLPELTRASRQYITITINHRYIR-------------------NFELTKAIIQGY 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++N+ L D+ P K V + ++ I IR K+IA
Sbjct: 273 ESKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLIKLIAETIR----KRIAV 328
Query: 358 DSFDVDMLEDAELP 371
++ D+ D +P
Sbjct: 329 ENLIPDVDADQFIP 342
>gi|307243917|ref|ZP_07526042.1| DNA mismatch repair protein, C-terminal domain protein
[Peptostreptococcus stomatis DSM 17678]
gi|306492739|gb|EFM64767.1| DNA mismatch repair protein, C-terminal domain protein
[Peptostreptococcus stomatis DSM 17678]
Length = 686
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 179/359 (49%), Gaps = 37/359 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M IN L ++ N + +G V+ + +++E+V NS+DAGA + + + +KV+DD
Sbjct: 1 MTRINILDDSTINKIAAGEVIERPSSIIKEVVENSLDAGAKNITIQIENAGKDMIKVIDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G+GI D + RHA TSK+ D+ + + + GFRGEALASI+ +S ++++TK
Sbjct: 61 GAGIEADDINKAFLRHA-TSKIRRAEDL---SNLHSLGFRGEALASIAAISKVDMVTKTE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERK-----DVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G R ++ G K E K + GT ++ +DLFYN P RRK+++S+ +++
Sbjct: 117 DALMGTRILINGGKI-------ESKNPIGANRGTQLIVKDLFYNVPARRKFLKSNHAEII 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
+ + V ++A+ +P VS K+I+ + + T S+ + +G + L +++
Sbjct: 170 N-ITDLVNKLAIGNPGVSIKYIN--NGKTIFETIGDSNLYNAIRMIYGKDTSDHLIKIDY 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
+I GYI++ S + Q ++IN RYV K P ++N + +++ D N
Sbjct: 227 QSSYYKIDGYIANNNVYRSNRNNQLIFINGRYV-KSP--NIMNAINSAY--KDIIPIN-- 279
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
P Y +NL D+ P K V F + P+L + +R +K
Sbjct: 280 ----------KYPVYFINLEIDPGKIDVNIHPSKLEVKFDNEGPILEDLGDYVRGTLLK 328
Score = 49.7 bits (117), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 22/189 (11%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L ++DQHAA ER+R E + K + + YL + L ++ + + +G
Sbjct: 513 LYMMDQHAAHERVRFE-MYMKSFKSDSIRIQYLLDPIIMDLSPTDMEVAIRNIDLFERYG 571
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSS- 1304
+I + G ++ I++ +P FG S+ + E + + D D SS
Sbjct: 572 FI--VEAFGHKN--------------ISVRGLPNTFGRPESEKFIYELIDKFLDLDKSSK 615
Query: 1305 --TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV- 1361
+ S + AC+ AI D L +E ++E LK+ + C HGRP V +
Sbjct: 616 RDSIYDSKYDQIAEMACKSAIKANDKLDYNEVMALLESLKKCDNPYTCPHGRPVMVSMTK 675
Query: 1362 -NLEALHKQ 1369
++E + K+
Sbjct: 676 YDIEKMFKR 684
>gi|429111757|ref|ZP_19173527.1| DNA mismatch repair protein MutL [Cronobacter malonaticus 507]
gi|426312914|emb|CCJ99640.1| DNA mismatch repair protein MutL [Cronobacter malonaticus 507]
Length = 635
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 181/381 (47%), Gaps = 38/381 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G+G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGAG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMEVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GAL 239
RIAL V+ ++P + S I +FL++ A + G L
Sbjct: 177 RIALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEQALAIEWQHGDL 234
Query: 240 EISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 235 ALRGWVAEPKGTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQQ---- 285
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 286 --------PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLHQQAAN 336
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+ EDA RFQ
Sbjct: 337 PLLLDEPAEDA------PRFQ 351
>gi|383787509|ref|YP_005472078.1| DNA mismatch repair protein MutL [Fervidobacterium pennivorans DSM
9078]
gi|383110356|gb|AFG35959.1| DNA mismatch repair protein MutL [Fervidobacterium pennivorans DSM
9078]
Length = 616
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 157/275 (57%), Gaps = 16/275 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I +LPE V + + +G V+ + VV+ELV NS+DAGA+ + V + Y+KV D+GSG
Sbjct: 7 IIKLPEEVVSKIAAGEVVVNPASVVKELVENSIDAGASNIEVQIKDGGKSYIKVSDNGSG 66
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S++ L+L +R+ TSK ++ ++D I ++GFRGEALASI +VS L +IT ++G
Sbjct: 67 MSKEDLLLAVQRY-TTSK---ISSIEDIYNITSYGFRGEALASIGEVSRL-VITTSNGNE 121
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+ +++ G + + + ++ GTTV DLF+N P RRK++ SS K V + +
Sbjct: 122 SNKLEMVGGK---VVRVSETLRERGTTVEVFDLFFNIPARRKFL-SSEKIERRMVTEVIE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSF-GIEDFSFLDEVNANDGALEI 241
R L P++ F F + ++E++ SS+ L F ++ F ++ + DG + +
Sbjct: 178 RFLLTKPEIKFLF---KVDNEIIYNAPSSNLLERFKLIFPEVKSFEIIE--DCKDGIIRV 232
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLL 276
SG ISSP ++ Q ++N R+V +H L
Sbjct: 233 SGIISSPQFFRKNRSGQLFFVNGRFVLDNLLHIAL 267
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 1156 PDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSV 1215
P ++ + LE + ++I + ++D HAA ERI E+L+ + V
Sbjct: 422 PHVVSPTNLEKVGEFTIIKNRYILFEDSDGIVIVDFHAAHERIIYEQLKERQFQ-----V 476
Query: 1216 AYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLL 1275
L E + + +L++ ++K+ G+ ++ T+ S + K + L
Sbjct: 477 VNLLIPVEFSIGKSLASVLESLENELKELGF--SLETEKSENSVK-----------VVLK 523
Query: 1276 AVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1335
++P + + + L+E L++ P S+L VL SKAC+ A+ GD L E
Sbjct: 524 SIPSLLKITQAQETLIEMLEEYRI---PFNKPRSILHVLASKACKTAVKTGDKLSVDEAK 580
Query: 1336 LIVEELKQTSLCFQCAHGRPTTVPL 1360
++++E+K+ +L C HGRP + +
Sbjct: 581 MLLDEIKRRNL-LTCPHGRPIMMKI 604
>gi|313127387|ref|YP_004037657.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
gi|448288139|ref|ZP_21479340.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
gi|312293752|gb|ADQ68212.1| DNA mismatch repair protein MutL [Halogeometricum borinquense DSM
11551]
gi|445570178|gb|ELY24744.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
Length = 787
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 177/366 (48%), Gaps = 38/366 (10%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGS 61
TI L + N + +G V+ VV+ELV NS+DA A ++ V V V+V DDG
Sbjct: 8 TIRALDDQTINRIAAGEVVERPASVVKELVENSLDADANRISVAVDSGGTEGVRVRDDGV 67
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+ R+ L + E H TSK+ + D++ +G+GT GFRGEAL +IS VS L + +K G
Sbjct: 68 GMDREDLQMAVEEHT-TSKISDINDLE--SGVGTLGFRGEALHTISAVSRLTVRSKPRGG 124
Query: 122 PNGYRKVMKGSKC-LYLGID-DERKDV-------GTTVVSRDLFYNQPVRRKYMQSSPKK 172
G G+ L ++ E DV GT V DLFYN P R+K+++++ +
Sbjct: 125 DTGRGSDAPGNDAGTELRVEGGEVTDVRPAGCPEGTVVEVEDLFYNTPARKKFLKTTATE 184
Query: 173 VLHSVKKCVLRIALVHPKVSFKFIDMESED-ELLCTCSSSSPLALLISSFGIEDFSFLDE 231
H V V + AL +P+V+ I +E +D E+ T S + ++S +G E +
Sbjct: 185 FDH-VNTVVTQYALANPEVA---ISLEHDDREVFATEGRGSLESTVLSVYGREVAESMTR 240
Query: 232 V--NANDGAL-EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 288
V +DG + ++G +S P + S + + ++N RYV + + +
Sbjct: 241 VEHEPDDGPVASVTGLVSHPETTRSARDYLSTFVNDRYVTARVLREAV------------ 288
Query: 289 WKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
A G L R P +L + P + D+ P K V F D V + +E A+
Sbjct: 289 LDAYGGQLATDR-----YPFAVLFVDVPPNTVDVNVHPRKMEVRFDDESGVKSAVESAVE 343
Query: 349 SAWMKK 354
SA +++
Sbjct: 344 SALLEQ 349
Score = 43.5 bits (101), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 23/200 (11%)
Query: 1163 CLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLD-AE 1221
L +VL Q+ +I + +IDQHAADER+ E L+ + L+G+ + A D E
Sbjct: 583 TLPSMRVLGQLLDTYIVAETADGMVLIDQHAADERVNYERLQRE-LAGDVTTQALADPVE 641
Query: 1222 QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF 1281
EL E L + + + + G+ + G R+ + + +VP +F
Sbjct: 642 MELTAREAA--LFEEYQDALAQTGF--HAGRTGERT--------------VEVRSVPAVF 683
Query: 1282 GVNLSDVDLLEFLQQLAD--TDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIV 1338
L L + L DG T +V +L AC ++ SL ++
Sbjct: 684 AEALRPELLRDALTAFVSEGEDGGRETVDAVADELLADLACYPSVTGNTSLTEGSVLDLL 743
Query: 1339 EELKQTSLCFQCAHGRPTTV 1358
L + C HGRP +
Sbjct: 744 SALDDCENPYACPHGRPVVI 763
>gi|373111568|ref|ZP_09525823.1| DNA mismatch repair protein mutL [Myroides odoratimimus CCUG 10230]
gi|371640235|gb|EHO05840.1| DNA mismatch repair protein mutL [Myroides odoratimimus CCUG 10230]
Length = 761
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 167/346 (48%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ + VV+EL+ NSVDAGAT++ + ++V+D+G G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPSSVVKELIENSVDAGATEIKLILKEAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +D + T GFRGEALASI+ ++ +E+ T+ H
Sbjct: 65 MSDVDARMSFERHA-TSKI---SKAEDLFALSTKGFRGEALASIAAIAHVELKTRTHEAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V++G+K + + GT+ ++LF+N P RR +++S + + + +
Sbjct: 121 LGTHIVIEGTKLVSQEV--AVTPAGTSFSVKNLFFNIPARRNFLKSDNVEFRNIIDEFE- 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI LVH + F I SE + ++ +++ FG L + N +E++
Sbjct: 178 RIVLVHHNIHFSLIHNGSE---VFNLLPTNARQRIVNVFGTRTNEKLVPIKENTEIVEVT 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + + Q+ ++N R+V G +H + A G L K
Sbjct: 235 GFVGKPEFAKKSRGEQFFFVNDRFVKSGYLHHAI------------MAAYEGLL-----K 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P+Y + P D+ P KT V F D + + + + I+
Sbjct: 278 EGTHPSYFIYFNVPPDSIDINIHPTKTEVKFDDEQALYSILRSIIK 323
>gi|448683833|ref|ZP_21692453.1| DNA mismatch repair protein MutL [Haloarcula japonica DSM 6131]
gi|445783406|gb|EMA34235.1| DNA mismatch repair protein MutL [Haloarcula japonica DSM 6131]
Length = 717
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 161/370 (43%), Gaps = 41/370 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + + +G V+ VV+ELV N++DA A +V V V ++V DD
Sbjct: 1 MTDIQRLDDRTVERIAAGEVVERPASVVKELVENAIDADANRVDVVVEAGGTDGIQVTDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R+ + E+H TSK+ +AD++ G+GT GFRGEAL +I VS L I T+
Sbjct: 61 GVGMDREAVETAVEKHT-TSKIRDIADLE--GGVGTLGFRGEALHAIGAVSRLTIRTRPR 117
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G V++G +G + GTT+ DLFYN P RRKY++ + H V
Sbjct: 118 GGDVGTELVLEGGDVTSVGPAGCPE--GTTIAVEDLFYNVPARRKYLKQESTEFAH-VNT 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN---- 235
V AL +P V+ + E T ++S +G E + V A
Sbjct: 175 VVASYALANPDVAVSL--THGDRETFSTTGQGDLRETVMSVYGREVAESMISVGAGSEAN 232
Query: 236 ----------DGALE-ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFD 284
DG L+ + G +S P + S + + Y+N RYV G + + +
Sbjct: 233 AGGDDAGSFPDGPLDGVHGLVSHPETNRSGREYLSTYVNGRYVRAGTVRDAVVDAYGTQI 292
Query: 285 CSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIE 344
D + P +L L P D+ P K V F D E V +
Sbjct: 293 APDRY-----------------PFAVLFLDVPAGDVDVNVHPRKMEVRFADDEGVREQVR 335
Query: 345 RAIRSAWMKK 354
A+ A +++
Sbjct: 336 TAVEDALLRE 345
>gi|268611652|ref|ZP_06145379.1| DNA mismatch repair protein MutL [Ruminococcus flavefaciens FD-1]
Length = 677
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 175/360 (48%), Gaps = 39/360 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M IN L + + + +G V+ + V++ELV NS+D+GA + V + Y++V DD
Sbjct: 1 MPPINILSKEISELIAAGEVIERPSSVIKELVENSIDSGARHITVEIKNGGTTYMRVTDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + RHA TSK+ D+D+ I T GFRGEALAS++ V+ +E++TK
Sbjct: 61 GCGMSFGDVPKAFLRHA-TSKITAKEDLDN---ILTLGFRGEALASVAAVARVEVLTKQR 116
Query: 120 GRPNGYRKVMKGSKCLY---LGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++GS+ G D GTT++ RDLFYN P R+K+M+ + ++
Sbjct: 117 EDALGTLYAIEGSEEKAHEESGCPD-----GTTIIIRDLFYNVPARQKFMKKDVTEA-NA 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSF-LDEVNAN 235
V + +I + HP V+FK I ++ + S L + + DF+ L EV+
Sbjct: 171 VSNILQKITMSHPDVAFKLI---RDNRVEFNSSGDGELFSAVYAVYGRDFARDLMEVDYE 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA--NN 293
+ + GY+ P S + +AFQ ++N RYV S CS + + N
Sbjct: 228 YEGIHVGGYVIKPLYSKNNRAFQNFFVNGRYV-------------RSKLCSSALENAYTN 274
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ GK PA +L + P D+ P K V F + V + A+++A MK
Sbjct: 275 MMMTGK------FPACVLMIDLPPVAMDVNIHPTKAEVRFTNERNVSDAVYFAVKNAMMK 328
>gi|423135656|ref|ZP_17123302.1| DNA mismatch repair protein mutL [Myroides odoratimimus CIP 101113]
gi|371640760|gb|EHO06356.1| DNA mismatch repair protein mutL [Myroides odoratimimus CIP 101113]
Length = 761
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 167/346 (48%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ + VV+EL+ NSVDAGAT++ + ++V+D+G G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPSSVVKELIENSVDAGATEIKLILKEAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +D + T GFRGEALASI+ ++ +E+ T+ H
Sbjct: 65 MSDVDARMSFERHA-TSKI---SKAEDLFALSTKGFRGEALASIAAIAHVELKTRTHEAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V++G+K + + GT+ ++LF+N P RR +++S + + + +
Sbjct: 121 LGTHIVIEGTKLVSQEV--AVTPAGTSFSVKNLFFNIPARRNFLKSDNVEFRNIIDEFE- 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI LVH + F I SE + ++ +++ FG L + N +E++
Sbjct: 178 RIVLVHHNIHFSLIHNGSE---VFNLLPTNARQRIVNVFGTRTNEKLVPIKENTEIVEVT 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + + Q+ ++N R+V G +H + A G L K
Sbjct: 235 GFVGKPEFAKKSRGEQFFFVNDRFVKSGYLHHAI------------MAAYEGLL-----K 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P+Y + P D+ P KT V F D + + + + I+
Sbjct: 278 EGTHPSYFIYFNVPPDSIDINIHPTKTEVKFDDEQALYSILRSIIK 323
>gi|340619655|ref|YP_004738108.1| DNA mismatch repair protein MutL [Zobellia galactanivorans]
gi|339734452|emb|CAZ97829.1| DNA mismatch repair protein MutL [Zobellia galactanivorans]
Length = 618
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 174/347 (50%), Gaps = 30/347 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGAT--KVFVYVGVCNCYVKVVDDGS 61
I LP+ V N + +G V+ VV+EL+ N++DAGAT K+ + G ++VVDDG
Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATTIKLIIKEG-GKILIQVVDDGM 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+S L ERHA TSK+ D+ + + T GFRGEALASI+ ++ +E+ T+
Sbjct: 64 GMSATDARLSFERHA-TSKIQKAEDLFN---LNTKGFRGEALASIAAIAHVEMQTRPETE 119
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
G ++GSK ++ K GT++ ++LF+N P RR +++S+ ++ H +
Sbjct: 120 ELGTHIKIEGSKIIFQEASVTPK--GTSMAVKNLFFNIPARRNFLKSNQVELRH-ITDEF 176
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
R+AL HP ++F F + +E L S + +++ FG L V ++I
Sbjct: 177 HRVALAHPSIAFHFYNNGNE---LFNLPSDNYRKRIVNIFGSRTNQKLVPVEEETPIVKI 233
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
G+I+ P + + Q+ +IN+R++ +H + + A+F+ G +
Sbjct: 234 KGFITKPEFAKKSRGEQFFFINNRFIKSPYLH---HAVVAAFE---------GLI----- 276
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
KS + P Y L L D+ P KT V F D + A + ++
Sbjct: 277 KSDSYPGYFLYLEVDPGSIDINIHPTKTEVKFDDEHSLYAILRSTVK 323
>gi|282859618|ref|ZP_06268721.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella
bivia JCVIHMP010]
gi|282587621|gb|EFB92823.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella
bivia JCVIHMP010]
Length = 581
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 174/371 (46%), Gaps = 30/371 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGAT--KVFVYVGVCNCYVKVVDDGS 61
I LP++V N + +G V+ V++EL+ NSVDAGAT KV V V ++VVD+G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELIENSVDAGATIIKVLV-VDAGRTSIQVVDNGK 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+S L ERH ATSK + DD + T GFRGEALASI+ V+ +E+ T+ G
Sbjct: 64 GMSEIDARLSFERH-ATSK---IRKADDLFSLHTMGFRGEALASIAAVAQVELKTRIEGD 119
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
G + G ++G + + VG+ + +LF+N P RRK+++S+ + L+++
Sbjct: 120 ELGCHLSISGGS--FVGQEPCQCAVGSNFLIENLFFNVPARRKFLKSNTTE-LNNIITAF 176
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
RIALV+P ++F ++E L CS ++ FG L V I
Sbjct: 177 QRIALVYPSITFTLHSNDTEMFNLHACSFKQR---IVEIFGKRLSHELLPVEVETTLCNI 233
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
G++ P S A QY+++N RY+ HK + A +
Sbjct: 234 HGFVGKPESSKKKGAHQYLFVNDRYMKHPYFHKAI------------MSAYERLIPQGEQ 281
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFD 361
S Y + P D+ P KT + F++ + + + A+R A K + D
Sbjct: 282 VS-----YFIYFNVPAEDIDVNIHPTKTEIKFENEQAIWQILMAAVRDAIGKFHDVSAID 336
Query: 362 VDMLEDAELPL 372
D ++P+
Sbjct: 337 FDTEGRPDIPV 347
>gi|156932401|ref|YP_001436317.1| DNA mismatch repair protein [Cronobacter sakazakii ATCC BAA-894]
gi|166232088|sp|A7MMA2.1|MUTL_CROS8 RecName: Full=DNA mismatch repair protein MutL
gi|156530655|gb|ABU75481.1| hypothetical protein ESA_00180 [Cronobacter sakazakii ATCC BAA-894]
Length = 635
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 183/381 (48%), Gaps = 38/381 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G+G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGAG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMEVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GAL 239
RIAL V+ ++P + S I +FL+ A + G L
Sbjct: 177 RIALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEHALAIEWQHGDL 234
Query: 240 EISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 235 ALRGWVAEPKGTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQ----- 284
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 285 -------QPAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAAN 336
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+ + E AE ++ RFQ
Sbjct: 337 ---PLSLNEPAE---DAPRFQ 351
>gi|85817536|gb|EAQ38710.1| DNA mismatch repair protein MutL [Dokdonia donghaensis MED134]
Length = 626
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 170/347 (48%), Gaps = 30/347 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGA+ + + V ++++DDG G
Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASSIKLIVKDAGKTLIQIIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ DD + T GFRGEALASI+ V+ + + T+ G
Sbjct: 65 MSDTDARMSFERHA-TSKI---TTADDLFNLNTKGFRGEALASIAAVAHVALKTRPEGAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++GSK + + K GT++ ++LF+N P RR +++S+ ++ H + +
Sbjct: 121 VGTHIEIEGSKIITQEVCATPK--GTSLAVKNLFFNIPARRNFLKSNSVELRHVIDEF-Q 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP ++F E E L + +++ FG + L V L I+
Sbjct: 178 RVALAHPDIAFAMYHNEGE---LFQLPKGNLKQRIVAIFGGKTNEKLVPVQEETDILTIN 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKRS 301
G++ P S + Q+ ++N R++ LNH + A+FD G L +
Sbjct: 235 GFVVKPEFSKKTRGEQFFFVNDRFIKSA----YLNHAVTAAFD---------GLLPDR-- 279
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
A +Y L L+ + D+ P KT + F D + A + I+
Sbjct: 280 ---ARASYFLYLKVDPATIDINIHPTKTEIKFDDEHALYAMLRSTIK 323
>gi|423330080|ref|ZP_17307880.1| DNA mismatch repair protein mutL [Myroides odoratimimus CCUG 3837]
gi|404602552|gb|EKB02248.1| DNA mismatch repair protein mutL [Myroides odoratimimus CCUG 3837]
Length = 761
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 167/346 (48%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ + VV+EL+ NSVDAGAT++ + ++V+D+G G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPSSVVKELIENSVDAGATEIKLILKEAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +D + T GFRGEALASI+ ++ +E+ T+ H
Sbjct: 65 MSDVDARMSFERHA-TSKI---SKAEDLFALSTKGFRGEALASIAAIAHVELKTRTHEAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V++G+K + + GT+ ++LF+N P RR +++S + + + +
Sbjct: 121 LGTHIVIEGTKLVSQEV--AVTPAGTSFSVKNLFFNIPARRNFLKSDNVEFRNIIDEFE- 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI LVH + F I SE + ++ +++ FG L + N +E++
Sbjct: 178 RIVLVHHNIHFSLIHNGSE---VFNLLPTNARQRIVNVFGTRTNEKLVPIKENTEIVEVT 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + + Q+ ++N R+V G +H + A G L K
Sbjct: 235 GFVGKPEFAKKSRGEQFFFVNDRFVKSGYLHHAI------------MAAYEGLL-----K 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P+Y + P D+ P KT V F D + + + + I+
Sbjct: 278 EGTHPSYFIYFNVPPDSIDINIHPTKTEVKFDDEQALYSILRSIIK 323
>gi|423131920|ref|ZP_17119595.1| DNA mismatch repair protein mutL [Myroides odoratimimus CCUG 12901]
gi|371640921|gb|EHO06515.1| DNA mismatch repair protein mutL [Myroides odoratimimus CCUG 12901]
Length = 761
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 167/346 (48%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ + VV+EL+ NSVDAGAT++ + ++V+D+G G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPSSVVKELIENSVDAGATEIKLILKEAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + +D + T GFRGEALASI+ ++ +E+ T+ H
Sbjct: 65 MSDVDARMSFERHA-TSKI---SKAEDLFALSTKGFRGEALASIAAIAHVELKTRTHEAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V++G+K + + GT+ ++LF+N P RR +++S + + + +
Sbjct: 121 LGTHIVIEGTKLVSQEV--AVTPAGTSFSVKNLFFNIPARRNFLKSDNVEFRNIIDEFE- 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI LVH + F I SE + ++ +++ FG L + N +E++
Sbjct: 178 RIVLVHHNIHFSLIHNGSE---VFNLLPTNARQRIVNVFGTRTNEKLVPIKENTEIVEVT 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + + Q+ ++N R+V G +H + A G L K
Sbjct: 235 GFVGKPEFAKKSRGEQFFFVNDRFVKSGYLHHAI------------MAAYEGLL-----K 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P+Y + P D+ P KT V F D + + + + I+
Sbjct: 278 EGTHPSYFIYFNVPPDSIDINIHPTKTEVKFDDEQALYSILRSIIK 323
>gi|417789491|ref|ZP_12437135.1| DNA mismatch repair protein [Cronobacter sakazakii E899]
gi|449306692|ref|YP_007439048.1| DNA mismatch repair protein [Cronobacter sakazakii SP291]
gi|333956397|gb|EGL74056.1| DNA mismatch repair protein [Cronobacter sakazakii E899]
gi|449096725|gb|AGE84759.1| DNA mismatch repair protein [Cronobacter sakazakii SP291]
Length = 635
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 183/381 (48%), Gaps = 38/381 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G+G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGAG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMEVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GAL 239
RIAL V+ ++P + S I +FL+ A + G L
Sbjct: 177 RIALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEHALAIEWQHGDL 234
Query: 240 EISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 235 ALRGWVAEPKGTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQ----- 284
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 285 -------QPAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAAN 336
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+ + E AE ++ RFQ
Sbjct: 337 ---PLSLNEPAE---DAPRFQ 351
>gi|88704498|ref|ZP_01102212.1| DNA mismatch repair protein mutL [Congregibacter litoralis KT71]
gi|88701549|gb|EAQ98654.1| DNA mismatch repair protein mutL [Congregibacter litoralis KT71]
Length = 629
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 170/349 (48%), Gaps = 32/349 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RLP + N + +G V+ VV+EL+ NS+DAGA +V + + +++ DD
Sbjct: 1 MPLIKRLPPRLANQIAAGEVVERPASVVKELLENSLDAGARRVDLDIEAAGTKLIRIRDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK-A 118
GSGI+ D L L +RHA TSK+ L DD +G+FGFRGEALASI VS L + + A
Sbjct: 61 GSGIASDDLPLALDRHA-TSKIESL---DDLEQVGSFGFRGEALASIGSVSHLVVTSNTA 116
Query: 119 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
+G G + + + + GTTV RDLF+N P RRK++++ + H +
Sbjct: 117 EAGSDGQAASCSG-RDMEVTLKPAAHPRGTTVEVRDLFFNTPARRKFLRTERTEFNH-LD 174
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSP----LALLISSFGIEDFSFLDEVNA 234
V RIAL VSF + L C + + +A L +E+ +D
Sbjct: 175 DVVKRIALSRFDVSFALRHNGRQLRDLRRCDNEADQLRRVASLCGPAFVENAVAIDR--- 231
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
N G L + G+++ P S S Q+ Y+N RY+ KL+ H A SD
Sbjct: 232 NAGDLRLHGWVAQPSFSRSQADLQHFYVNGRYIRD----KLVVH-AVRQAFSDV------ 280
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 343
+G+ PA++L L + D+ P K V F+D V +FI
Sbjct: 281 LYQGRH------PAFVLYLELDPAEVDVNVHPTKHEVRFRDGRSVHSFI 323
>gi|427407123|ref|ZP_18897328.1| DNA mismatch repair protein MutL [Selenomonas sp. F0473]
gi|425707598|gb|EKU70642.1| DNA mismatch repair protein MutL [Selenomonas sp. F0473]
Length = 624
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 171/353 (48%), Gaps = 29/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L +A N + +G V+ VV+ELV N++DAGAT V V + G +++V D+
Sbjct: 1 MTRIHVLDDATINKIAAGEVVERPASVVKELVENAIDAGATAVEVEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++R RHA TSK+ AD+ +GT GFRGEAL +I+ VS ++T+
Sbjct: 61 GRGMARADAETAILRHA-TSKIASAADLQT---VGTLGFRGEALPTIASVSRFSLLTRTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G K I++ D GTTV +LF+N P R+K++++ + +
Sbjct: 117 DADLGTRVDIIGGKPPE--IEEAGCDAGTTVRVEELFFNTPARKKFLKTD-RTEAGKISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND--G 237
V+ +AL P ++F+F++ + L T S + S +G + L ++ D G
Sbjct: 174 YVIMLALSRPDIAFRFVN--NNRLTLMTAGDDSLRRTIESIYGGDAAGALIPLDFTDEAG 231
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ I+GYIS P S +A+Q +N R + I K ++++ S GF
Sbjct: 232 DIRITGYISKPSMIRSSRAWQTYIVNGRTIQNRAIAKAVDNV------YRSLVPKMGF-- 283
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P +L + P D+ P KT + F+D + + +A+ A
Sbjct: 284 ---------PLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKAVLDA 327
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 50/204 (24%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1216
+ QVD +I + L +IDQHAA ERI + L H +LS + +
Sbjct: 438 IGQVDLTYIVAQSAQALYIIDQHAAHERILFDRFSARAEGIPSQQMLVHAILSFDAREAQ 497
Query: 1217 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
Y++ EL +G++L G R + L
Sbjct: 498 YIEENSEL-FSRLGFRL-----------------EPAGDREYR--------------LTE 525
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKACRGAIMFGDSLLPSEC 1334
P + ++ + E L L D ++ P+ LR L + ACR AI G+ L +
Sbjct: 526 APADVPTDEAEHVIREILVSLGDLHAAT---PAELRQAALATMACRAAIKAGEELNFRQM 582
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTV 1358
+++EEL+ T F C HGRPT +
Sbjct: 583 EILLEELRGTPFPFTCPHGRPTIL 606
>gi|421858020|ref|ZP_16290309.1| DNA mismatch repair enzyme [Paenibacillus popilliae ATCC 14706]
gi|410832470|dbj|GAC40746.1| DNA mismatch repair enzyme [Paenibacillus popilliae ATCC 14706]
Length = 710
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 174/356 (48%), Gaps = 29/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ L + + N + +G V+ + VV+ELV NS+DAG+T++ V V ++V D+
Sbjct: 1 MAVIHILDDHIANQIAAGEVVERPSSVVKELVENSIDAGSTRIDVTVEEGGLQLIRVKDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI+ D + +RH ATSK +A D I + GFRGEAL SI+ V+ +E+ + A
Sbjct: 61 GSGIAEDDVETAFQRH-ATSK---IASGKDLFAIRSLGFRGEALPSIAAVARVELTSSAD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + M+G G + + GT + RDLFYN P R KYM++ ++ H +
Sbjct: 117 DNGLGRKLTMEGGTVKAFGPEQSMR--GTDIAIRDLFYNTPARLKYMKTVQTELGH-ISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
+ R+AL +P+++F + D LL + L +I++ +G++ + V A
Sbjct: 174 YIYRLALAYPQIAFT---LRHNDNLLLQTIGNGDLQQVIAAVYGVQTAKSMVPVEAEQLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ GYI P + S + ++N RYV +++ + KA + L
Sbjct: 231 YKLKGYIGKPELTRSNRNAMSWFVNGRYVRSFALNQAV------------LKAYHTLLPI 278
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
R P +L+++ +L D+ P K V F + FI +R +++
Sbjct: 279 NR-----FPMIVLHVQMHPTLVDVNVHPAKLEVRFSKEPDLCEFISSTLRDILLEQ 329
>gi|389839482|ref|YP_006341566.1| DNA mismatch repair protein [Cronobacter sakazakii ES15]
gi|387849958|gb|AFJ98055.1| DNA mismatch repair protein [Cronobacter sakazakii ES15]
Length = 635
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 183/381 (48%), Gaps = 38/381 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G+G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGAG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMEVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GAL 239
RIAL V+ ++P + S I +FL+ A + G L
Sbjct: 177 RIALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEHALAIEWQHGDL 234
Query: 240 EISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 235 ALRGWVAEPKGTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQ----- 284
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 285 -------QPAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAAN 336
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+ + E AE ++ RFQ
Sbjct: 337 ---PLSLNEPAE---DAPRFQ 351
>gi|363580107|ref|ZP_09312917.1| DNA mismatch repair protein MutL [Flavobacteriaceae bacterium HQM9]
Length = 634
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 179/374 (47%), Gaps = 28/374 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ NS+DAGAT V + + ++VVD+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENSIDAGATHVSLIIKEAGKTLIQVVDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK + DD + T GFRGEALASI+ ++ +E TK +
Sbjct: 65 MSVTDARLSFERH-ATSK---IKTADDLFALATKGFRGEALASIAAIAHVEQKTKQENQD 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++GS+ ++ K GT + ++LFYN P RR +++S+ ++ H + +
Sbjct: 121 LGTHIKIEGSEVIFQEPCATPK--GTAIWVKNLFYNVPARRNFLKSNGVELRHIIDEF-H 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+A+VH V F+F SE + S+ L+ FG + L V + ++
Sbjct: 178 RVAMVHCNVHFEFYSNGSE---VLNLPVSNKRQRLVHIFGGKTNEKLVPVTEETELVNVT 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + + Q+ ++N R+V K P L+H S A G LK K
Sbjct: 235 GFVGKPGHAKKTRGEQFFFVNDRFV-KSP---YLHHAVTS--------AFEGLLKDK--- 279
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
+ P+Y L L D+ P KT V F + + + A I ++ + + D
Sbjct: 280 --SYPSYYLYLAVDPKSIDINIHPTKTEVKFDNEQALYAIIRATVKHSLGQFNIAPVLDF 337
Query: 363 DMLEDAELPLESSR 376
+LP E ++
Sbjct: 338 QRDASMDLPYEQAK 351
>gi|331084835|ref|ZP_08333923.1| hypothetical protein HMPREF0987_00226 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410929|gb|EGG90351.1| hypothetical protein HMPREF0987_00226 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 691
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 176/360 (48%), Gaps = 37/360 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ +V+ELV N++DA AT + V + G+ +++
Sbjct: 1 MPNIQVLDQVTIDKIAAGEVIERPASIVKELVENAIDAKATAITVEIKDGGIS--LIRIA 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI ++ + L RH+ TSK+ + D+ TGI + GFRGEAL+SI+ ++ +E+ TK
Sbjct: 59 DNGCGIPKEEVPLAFLRHS-TSKIRSVEDL---TGIASLGFRGEALSSIAAIAQVELRTK 114
Query: 118 AHGRPNGYRKVMKGS--KCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G + ++G K L +G+ D GT R +F+N P RRK++++ +
Sbjct: 115 VKEADAGIQYRIEGGSEKSLEEIGMPD-----GTAFFVRQIFFNTPARRKFLKTPMTEAS 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
H V + + R+AL HP++SF+F + + L T + ++ +G + L E+NA
Sbjct: 170 H-VSELITRLALSHPEISFQF--LTNGQPKLHTSGNGRLKDVIYHIYGRDITGNLLEINA 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
+ I GYI P S + ++ YIN RYV I K + D++K G
Sbjct: 227 KANGVAIRGYIGKPLISRGNRNYENYYINGRYVKSSIIAKAI---------EDAYK---G 274
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
F + P +L+ + D+ P K V F + V FI ++ A +K
Sbjct: 275 F-----TMQHKYPFTVLHFTIDGTDLDVNVHPTKMEVRFSKQQEVYNFIYNTLKDALSEK 329
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 33/220 (15%)
Query: 1153 FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERI----RLEELRHKVL 1208
FF ++K ++ ++ QV + + V + +IDQHAA ER+ L+ ++ K
Sbjct: 488 FFDQKLLSKEAKQEYTLVGQVFETYWIVEYRDQMYIIDQHAAHERVLYERTLKRMKEKQF 547
Query: 1209 SGEGKS---VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLL 1265
+ + S V L ++E QLL E G+ I G S+
Sbjct: 548 TSQRISPPIVLNLSMQEE--------QLLSEHMENFTKIGF--EIEPFGGDSY------- 590
Query: 1266 QRQITVITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIM 1324
+ AVP +F + D+ L+E L L+D+ ++ P VL + S +C+ A+
Sbjct: 591 -------AVRAVPDNLFSIAKKDL-LIEMLDSLSDSISTNLAPDIVLEKIASMSCKAAVK 642
Query: 1325 FGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
L E ++ EL + + C HGRPT + + E
Sbjct: 643 GNSRLSGREVDALIGELLELDNPYHCPHGRPTIIAMTKRE 682
>gi|154497032|ref|ZP_02035728.1| hypothetical protein BACCAP_01325 [Bacteroides capillosus ATCC
29799]
gi|150273431|gb|EDN00559.1| putative DNA mismatch repair protein [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 684
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 173/352 (49%), Gaps = 27/352 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I +L V + + +G V+ VV+ELV N++DAGA V V + ++V D+
Sbjct: 7 MPHIQQLDPHVADLIAAGEVVERPASVVKELVENAIDAGAETVTVEIQRGGMSLIRVTDN 66
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D RHA TSK+ D++ IGT GFRGEALA+I+ VS ++++T+
Sbjct: 67 GCGIAADEAETAFLRHA-TSKIRTEHDLE---AIGTLGFRGEALAAIAAVSRVDLLTRTA 122
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G ++G + + ++ VGTT+V RDLF+N P R K+M+ + +V
Sbjct: 123 EEDLGAALSLEGGEVVSR--EEAGCPVGTTMVVRDLFFNTPARLKFMKKDAAEG-AAVFA 179
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP+VS KF+ + + ELL T + + S G + L EV + +
Sbjct: 180 MVQRLALAHPEVSMKFLR-DGKQELL-TPGDGQMKSAVYSVLGRDLALGLIEVKGSGEDM 237
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++G+ S P + +Q+ ++N RYV K +AA + + K F
Sbjct: 238 TVTGFTSLPACCRPTRGYQHFFVNGRYV------KSRTMMAALEEAYQNQKMVGKF---- 287
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
PA +L+L C S D+ P K V F + V + + A+ SA
Sbjct: 288 -------PACVLHLTCRLSGVDVNVHPTKQEVKFGNERQVFSAVYYAVLSAL 332
>gi|421613812|ref|ZP_16054883.1| DNA mismatch repair protein MutL [Rhodopirellula baltica SH28]
gi|408495398|gb|EKJ99985.1| DNA mismatch repair protein MutL [Rhodopirellula baltica SH28]
Length = 705
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 172/351 (49%), Gaps = 29/351 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I +LP + N + + V+ VV+EL+ NS+DAG+T++ + + G +++ DDG G
Sbjct: 15 IRQLPAHLVNQIAASEVIERPASVVKELLENSIDAGSTRIELSLEGGGVELIRISDDGCG 74
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ + L L HA TSKL D + +GT GFRGEALASI+ VS + I ++A G+
Sbjct: 75 MTAEQLPLAVTSHA-TSKL---PDDESLFHVGTLGFRGEALASIASVSQMTIRSRAEGQD 130
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + ++G G VGT + R+LF+N PVRRK+++ +P+ + +
Sbjct: 131 GGCQIDIRGGVIETPGPCG--CPVGTVIEVRNLFFNTPVRRKFLK-TPQTERGHIVEAFT 187
Query: 183 RIALVHPKVSFKFIDMESED-ELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
R+AL +PKV F + + E +LL T + + S FG E L + D ++I
Sbjct: 188 RLALANPKVHFVLRNGDKEMFDLLPTTRWADRIE---SFFGTEISEALIPIENQDETVQI 244
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
SGY P S QY+++N R++ + L H +A G L R
Sbjct: 245 SGYACDPSVSRGNNRMQYLFLNGRHIRD----RALQHALG--------EAYRGMLMVGRH 292
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
P L +R P + D+ P K V F D V + + + +R ++
Sbjct: 293 -----PVCFLRMRMPADMIDVNVHPAKLEVRFTDSGRVYSRLLQTLRQRFL 338
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 19/189 (10%)
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1231
QV ++++ + VIDQHA ER+ E + KVL + A L+A+Q LV +
Sbjct: 510 QVHQRYLVTQDEKGMVVIDQHALHERVLYERVCQKVLHED----ASLEAQQLLVPEPVSL 565
Query: 1232 QLLQNFAE-QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1290
+ A ++KD + + F L+Q + P + N D+
Sbjct: 566 TPAERAAALEVKDTLSRIGLEIE---DFGGETILIQ---------SYPAML-PNKPPADM 612
Query: 1291 LEFLQQLADTDGSSTTPPSVLR-VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQ 1349
L + + G P +L +L++ AC+ A+ GD L P E ++E+
Sbjct: 613 LRTVLESVMGAGRDPNPKDLLNHLLSTVACKAAVKAGDPLSPEEITSLLEQKDLYQETHH 672
Query: 1350 CAHGRPTTV 1358
C HGRPT +
Sbjct: 673 CPHGRPTAL 681
>gi|218782320|ref|YP_002433638.1| DNA mismatch repair protein MutL [Desulfatibacillum alkenivorans
AK-01]
gi|218763704|gb|ACL06170.1| DNA mismatch repair protein MutL [Desulfatibacillum alkenivorans
AK-01]
Length = 643
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 164/334 (49%), Gaps = 27/334 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M + LPE + N + +G V+ + V++ELV NS+DA +T++ V V ++V D+
Sbjct: 1 MAPVRILPEILTNKIAAGEVVERPSSVLKELVENSLDAKSTRIVVEVKKGGRSLIQVADN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ +D +L ER+A TSK+ D DD I T GFRGEAL SI VS L +IT+
Sbjct: 61 GDGMDKDDALLCLERYA-TSKI--YTD-DDLFSISTLGFRGEALPSIGSVSRLTLITRKK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G + VM+G K + + + GT + DLFYN P RRK++++ ++ H +
Sbjct: 117 DNPAGTKVVMQGGKI--VNVSEIGAPPGTMITVADLFYNVPARRKFLKTVATEMGH-IAD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ +AL P+ +F+ I ++ +L ++ P + G + L + + +
Sbjct: 174 TMSAMALGWPETAFELI--HNDRKLFSWPAAQDPQDRIADVLGKDVAPGLIRFSQKEPEV 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I G ++ P S + K Y+++N R V KL+ H + +K +KGK
Sbjct: 232 SIEGCLAMPEFSRTTKRGLYIFVNGRLVT----DKLVTHA-----LMEGYKGR--LMKGK 280
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVF 333
P ++ LR P D+ P K V F
Sbjct: 281 ------YPVAVVFLRVPPDQVDVNVHPAKAEVRF 308
Score = 46.6 bits (109), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 17/193 (8%)
Query: 1164 LEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQE 1223
+ D K L Q ++ + L ++DQHAA ERI E+ + + G G + L +
Sbjct: 452 VSDLKALGQFANAYVICRSSKGLLIVDQHAAHERILFEQFKKHMEVG-GIEIQNLLIPET 510
Query: 1224 LVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV 1283
L I ++L+ ++ G ++ R+F + A P +
Sbjct: 511 FELSHIEAEILERILPDLQKTG--IDVDRFSGRTF--------------VVKAAPAMLAN 554
Query: 1284 NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQ 1343
+ + E ++++A+ G++ ++ L AC G++ SL E ++++L+
Sbjct: 555 SDIGKIVKEMVEKVAEAGGNAHFFDALDECLIVMACHGSVRAHQSLSIQEMDALLKQLEA 614
Query: 1344 TSLCFQCAHGRPT 1356
QC HGRPT
Sbjct: 615 CERPSQCPHGRPT 627
>gi|386811797|ref|ZP_10099022.1| DNA mismatch repair protein [planctomycete KSU-1]
gi|386404067|dbj|GAB61903.1| DNA mismatch repair protein [planctomycete KSU-1]
Length = 622
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 173/356 (48%), Gaps = 31/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I LP +V N + +G V+ VV+EL+ N++DAGA+++ Y+ ++V DD
Sbjct: 1 MSKIKILPSSVINKIAAGEVIDRPASVVKELIENAIDAGASRIDTYLEDGGRKLIRVSDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ + L + + H ATSK L DD I + GFRGEAL SI +S II++A
Sbjct: 61 GVGMDTEDLAIAFQSH-ATSK---LQSADDLFSIHSLGFRGEALPSIGAISHACIISRAK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER-KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G +G + G LG ER GT V RDLF+N PVR+K+M+++P ++ + +
Sbjct: 117 GTIHGAEIRIDGG---VLGHMKERGAPEGTQVEVRDLFFNTPVRKKFMKTAPTEIAY-IS 172
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDG 237
+ + R +L +PK+ F + + ++ +A I FG E L V +
Sbjct: 173 EVLTRFSLSYPKIHFTLM---HNNRMVFNLPPVHDVAERIGMFFGEEMRKHLISVFLREE 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+SGY+ P+ + + Q++++N RY+ I + ++ +A +G L
Sbjct: 230 MCALSGYVVPPFFNKANARMQFIFLNGRYIKDSAIFRAIH------------EAYHGKLM 277
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
KR P L L+ S D+ P K V F++ + +I A++ K
Sbjct: 278 HKR-----YPIVFLFLQVEPSEVDVNVHPTKIEVRFRNTNVMYNYILSALKEGLNK 328
Score = 47.0 bits (110), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 1155 IPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS 1214
IP+ I +S +V Q+ +I L +IDQHA E I L H++ S S
Sbjct: 425 IPEGIMRS----KRVYLQIHNSYIVEETEDGLNIIDQHALHEII----LYHEIESSIRAS 476
Query: 1215 VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITL 1274
++ Q L++PE+ ++F I ++ +I + + F ++ + +
Sbjct: 477 RSF---SQRLLIPELVELNPKDFFSVISLREYLESIGIE-AEEFGQH---------TVVI 523
Query: 1275 LAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSEC 1334
+ P I + + E L +L++ D + ++++ AC+GAI G L P E
Sbjct: 524 RSFPQILKHLNAKAFIEEILAELSEEDFLKGKDKILSKLISVMACKGAIKAGQRLEPQEI 583
Query: 1335 ALIVEELKQT-SLCFQCAHGRPTTVPLVNLEALHKQ 1369
++E+ + + C HGRPT + +L+ L +Q
Sbjct: 584 EELLEKKRSIHAYIHNCPHGRPTALNF-SLDELQRQ 618
>gi|448680343|ref|ZP_21690660.1| DNA mismatch repair protein MutL [Haloarcula argentinensis DSM
12282]
gi|445768787|gb|EMA19864.1| DNA mismatch repair protein MutL [Haloarcula argentinensis DSM
12282]
Length = 717
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 163/370 (44%), Gaps = 41/370 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + + +G V+ VV+ELV N++DA A +V V V ++V DD
Sbjct: 1 MTDIQRLDDRTVERIAAGEVVERPASVVKELVENAIDADANRVEVVVEAGGTDGIRVTDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R+ + E+H TSK+ +AD++ G+GT GFRGEAL +I VS L I T+
Sbjct: 61 GVGMDREAVETAVEKHT-TSKIRDIADLEG--GVGTLGFRGEALHAIGAVSRLTIRTRPR 117
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G V++G +G + GTT+ DLFYN P RRKY++ + H V
Sbjct: 118 GGDVGTELVLEGGDVTSVGPAGCPE--GTTIAVEDLFYNVPARRKYLKQESTEFAH-VNT 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN---- 235
V AL +P V+ + E T ++S +G E + V A
Sbjct: 175 VVASYALANPDVAVSL--THGDRETFSTTGQGDLRETVMSVYGREVAESMISVGAGSEGN 232
Query: 236 ----------DGALE-ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFD 284
DG L+ + G +S P + + + + Y+N RYV G + A D
Sbjct: 233 AEGDETDSFPDGPLDGVHGLVSHPETNRAGREYLSTYVNGRYVRAGTVRD------AVID 286
Query: 285 CSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIE 344
+ A + + P +L L P D+ P K V F D E V +
Sbjct: 287 AYGTQIAPDRY-----------PFAVLFLDVPAGDVDVNVHPRKMEVRFADDEGVREQVR 335
Query: 345 RAIRSAWMKK 354
A+ A +++
Sbjct: 336 TAVEDALLRE 345
>gi|378822174|ref|ZP_09844993.1| DNA mismatch repair protein [Sutterella parvirubra YIT 11816]
gi|378599007|gb|EHY32076.1| DNA mismatch repair protein [Sutterella parvirubra YIT 11816]
Length = 779
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 170/348 (48%), Gaps = 31/348 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP + + + +G V+ VV+ELV N+VDAGAT + + + G + V DDG G
Sbjct: 56 IQELPSELISQIAAGEVIERPASVVKELVENAVDAGATSIEIRIEGGGLKRILVTDDGCG 115
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ L L +RHA TSK+ +L ++++ T + GFRGEALASI V+ + + + A G
Sbjct: 116 IPKEELGLALKRHA-TSKIRNLFELENVT---SLGFRGEALASIDAVAAVSVQSLAEGAT 171
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+ K+ G G GT + RDLFY P RRK+M+S + H + V
Sbjct: 172 RTW-KIEGGEVTPAAGTTR-----GTRIEVRDLFYKTPARRKFMKSETTEAAH-IADQVS 224
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIAL +P+VSF+ + E L AL I +E + V+ G++ +
Sbjct: 225 RIALANPQVSFRLWNNGREMLNLPASPDLEGRALKILPSRLEVNHRV--VDMEAGSMSLV 282
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G + P + + QY+++N R+V ++ H + A L G
Sbjct: 283 GIVGLPAAAKAKADAQYLFVNGRFVRD----RVFAHAVRA--------AYQDVLHG---- 326
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
Q P+Y L L + D+ P KT V F+D + AF+++A+ +A
Sbjct: 327 -QLQPSYCLFLTIAPTEVDVNVHPTKTEVRFRDSGRIHAFVQKAVETA 373
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 28/178 (15%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L ++D HAA ERI E+L+ + EG+ Q L++P Q++Q ++ +
Sbjct: 606 LVIVDMHAAAERITYEKLKKD--ADEGRLPV-----QPLLIP----QVMQATVTEVAN-- 652
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVD-------LLEFLQQLA 1298
H R+ +L+ + VI +VP + +SDV + E L LA
Sbjct: 653 --AQAHADELRAMGLDLSPAGERSLVIR--SVPSV----ISDVAGEELETMVREVLADLA 704
Query: 1299 DTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
+ S +L + AC G++ L E ++ +++T QC HGRPT
Sbjct: 705 EFGESRVVLEKRNHILATMACHGSVRANRRLTMEEMNALLRSMERTERSDQCNHGRPT 762
>gi|238764690|ref|ZP_04625634.1| DNA mismatch repair protein mutL [Yersinia kristensenii ATCC 33638]
gi|238697086|gb|EEP89859.1| DNA mismatch repair protein mutL [Yersinia kristensenii ATCC 33638]
Length = 631
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 187/381 (49%), Gaps = 37/381 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RH ATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARH-ATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQN 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIAL V+ I++ +L+ S L S G ++ G
Sbjct: 177 RIALARFDVA---INLSHNGKLMRQYRAATDPSQHERRLASICGPAFLQHALAISWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S ++ QY Y+N+R + +L+NH +A LK
Sbjct: 234 LTIRGWVADPAASRTLSEMQYCYVNNRMMRD----RLINHAIR--------QAYQDLLKD 281
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 282 DQQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQAAT 334
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+++ ED E +E+ R+Q
Sbjct: 335 PRLNIN--EDGE-EIEAPRWQ 352
>gi|429106267|ref|ZP_19168136.1| DNA mismatch repair protein MutL [Cronobacter malonaticus 681]
gi|426292990|emb|CCJ94249.1| DNA mismatch repair protein MutL [Cronobacter malonaticus 681]
Length = 635
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 184/381 (48%), Gaps = 38/381 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G+G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGAG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMEVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GAL 239
RIAL V+ ++P + S I +FL++ A + G L
Sbjct: 177 RIALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEQALAIEWQHGDL 234
Query: 240 EISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 235 ALRGWVAEPKGTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQQ---- 285
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
PAY+L L PH + D+ P K V F V FI + + S + + A
Sbjct: 286 --------PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSV-LNQQAA 335
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+ +D E AE ++ RFQ
Sbjct: 336 NPLSLD--EPAE---DAPRFQ 351
>gi|399026999|ref|ZP_10728637.1| DNA mismatch repair protein MutL [Flavobacterium sp. CF136]
gi|398075763|gb|EJL66869.1| DNA mismatch repair protein MutL [Flavobacterium sp. CF136]
Length = 628
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 169/347 (48%), Gaps = 30/347 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDA AT + + V+V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAVDAKATDIKLIIKDAGKSLVQVIDNGLG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ D+ + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSVTDARMCFERHA-TSKIRQAEDL---FSLHTKGFRGEALASIAAIAHMEMKTKQDQEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V++GSK + + K GT+ ++LF+N P RR +++S + H V
Sbjct: 121 LGTHIVIEGSKFISQEVAVLPK--GTSFAVKNLFFNIPARRNFLKSDTVEFRH-VMDEFQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP + F F SE + S+ ++ F + L VN + I
Sbjct: 178 RVALAHPNIHFTFYHNGSE---MYNLPISNFRQRIVGIFSGKTNEKLVPVNEETEIISIQ 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P S + Q+ ++N R++ G +H + + A++D G LK
Sbjct: 235 GFVCKPEFSKKNRGEQFFFVNDRFIKSGYLH---HAVMAAYD---------GLLK----- 277
Query: 303 SQAC-PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
C P+Y L L+ P + D+ P KT + F D + + A + +I+
Sbjct: 278 -DGCQPSYFLYLQVPPNTIDINIHPTKTEIKFDDEQALYAILRASIK 323
>gi|423346942|ref|ZP_17324629.1| DNA mismatch repair protein mutL [Parabacteroides merdae
CL03T12C32]
gi|409218603|gb|EKN11571.1| DNA mismatch repair protein mutL [Parabacteroides merdae
CL03T12C32]
Length = 621
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 177/370 (47%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ VV+ELV N+VDAGA + V + V+V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASVVKELVENAVDAGAGHIQVNIKDAGRTLVQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ + DD + T GFRGEALASI VS +E+ T+ G
Sbjct: 65 MSETDARMAFERHA-TSKI---STADDLFSLHTMGFRGEALASIVAVSQVELRTRLKGAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V GS+ ++ + G+ ++LF+N P RRK+++S+ + + + +
Sbjct: 121 LGTHLVFSGSEL--ESVEPDACTEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFE- 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+ +V+ ++E + S +++ +G L V+A + IS
Sbjct: 178 RIALVNSQVALSLYHNDTE---IFNLPESGLRQRIVNVYGKTLNQKLLSVDAQSSLVTIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A QY ++N R++ HK + +A +
Sbjct: 235 GFVGRPDSAKKRGALQYFFVNGRFMKHPYFHKAV------------MQAYEQLIPVGEQ- 281
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P Y + + D+ P KT + F++ +P+ + A R A K A + D
Sbjct: 282 ----PNYFIYFTLDPATIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDF 337
Query: 363 DMLEDAELPL 372
D+ + ++P+
Sbjct: 338 DVEDAIDIPV 347
>gi|117919048|ref|YP_868240.1| DNA mismatch repair protein [Shewanella sp. ANA-3]
gi|189030415|sp|A0KSR5.1|MUTL_SHESA RecName: Full=DNA mismatch repair protein MutL
gi|117611380|gb|ABK46834.1| DNA mismatch repair protein MutL [Shewanella sp. ANA-3]
Length = 648
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 173/356 (48%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +K+ D+
Sbjct: 1 MG-IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDN 59
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI +D L L RHA TSKL L DD I +FGFRGEALASIS VS L + ++
Sbjct: 60 GSGIPKDELALALSRHA-TSKLHSL---DDLEAILSFGFRGEALASISSVSRLTLTSRTA 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ ++ +G+ + + + VG+T+ DLF+N P RR++++S + H + +
Sbjct: 116 EQTEAWQAYAEGAD-MAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTH-IDE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNAN 235
+ RIALV + F + +++ C + + + F DE V
Sbjct: 174 WLKRIALVRGDIHFT---LTHNGKIVRNCRPAMNEPQYLQRLTQVAGRQFADEALRVECQ 230
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
L +SGY+ SP+ ++ + Y Y+N R V +L+NH F
Sbjct: 231 HDDLRLSGYLQSPWSTV-LTDTHYFYVNGRLVRD----RLVNH-----------AVRQAF 274
Query: 296 LKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
+ + P Y+L L PH + D+ P K V F V +I +A++SA
Sbjct: 275 AQKAEVEQ---PGYVLMLDIDPHQV-DVNVHPAKHEVRFHQSRYVHDYILQALQSA 326
>gi|237809130|ref|YP_002893570.1| DNA mismatch repair protein MutL [Tolumonas auensis DSM 9187]
gi|259511152|sp|C4L9N1.1|MUTL_TOLAT RecName: Full=DNA mismatch repair protein MutL
gi|237501391|gb|ACQ93984.1| DNA mismatch repair protein MutL [Tolumonas auensis DSM 9187]
Length = 594
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 190/397 (47%), Gaps = 40/397 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ V++ELV NS+DAGA ++ V + C ++V D+G G
Sbjct: 3 IQILPPILANQIAAGEVVERPASVIKELVENSLDAGANRIDVELEKGGCQLIRVRDNGGG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ G+
Sbjct: 63 ICGTELALALARHA-TSKV---ATLDDLEHIASLGFRGEALASISSVSRLTLTSRTAGQH 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTTV DLF+N P RR++++S + H + + +
Sbjct: 119 EAWQAYAEGRE-MAVTVKPAAHPVGTTVEVLDLFFNTPARRRFLRSEKTEFAH-IDELLR 176
Query: 183 RIALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
R+AL V+ I+++ +LL + S ++ + G E +++
Sbjct: 177 RLALSRFDVA---INLKHNGKLLRQYRPAQTESQQEQRVVQACGAEFMQAALRIDSEHLG 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLA--ASFDCSDSWKANNGFL 296
L + G++ +P ++ QY Y+N R + KLLNH A +C+
Sbjct: 234 LHLYGWL-APQPLTAINEVQYCYVNGRMIRD----KLLNHAIRQAYSECTG--------- 279
Query: 297 KGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
+ PAY+L L PH + D+ P K V F + V FI + IR A
Sbjct: 280 ------TSFQPAYILYLELDPHQV-DVNVHPSKHEVRFHESRQVHDFIVQVIRQALQTAY 332
Query: 356 AHDSFDVDM--LEDAELPLESSRFQSHQSSTHLHSSP 390
+ ++ D +EDA S ++ + H +S+P
Sbjct: 333 SENAPDAVFSGIEDAAPDYPVSPLKNRATGQHQYSAP 369
>gi|354596041|ref|ZP_09014058.1| DNA mismatch repair protein mutL [Brenneria sp. EniD312]
gi|353673976|gb|EHD20009.1| DNA mismatch repair protein mutL [Brenneria sp. EniD312]
Length = 643
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 171/350 (48%), Gaps = 33/350 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G+G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNGAG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHA-TSKI---ATLDDLEAIVSLGFRGEALASISSVSRLTLTSRTAQQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMSVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFAH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 238
RIAL V+ I + +L+ + A G I +FL V+
Sbjct: 177 RIALARFDVA---ITLRHNGKLIRQYRPAPEPAQHERRLGSICGSAFLQHALTVSWRHDD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P + + QY Y+N R + +L+NH +++
Sbjct: 234 LTIHGWVADPSGAKQLPEMQYCYVNQRMMRD----RLINH-----AIRQAYQ-------- 276
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
R K + PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 277 DRLKDEQQPAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|34496797|ref|NP_901012.1| DNA mismatch repair protein [Chromobacterium violaceum ATCC 12472]
gi|34102652|gb|AAQ59017.1| DNA mismatch repair protein [Chromobacterium violaceum ATCC 12472]
Length = 631
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 171/351 (48%), Gaps = 28/351 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RLP+ + N + +G V+ ++E++ NS+DAGAT++ V + ++V D+
Sbjct: 1 MTRIQRLPDHLVNQIAAGEVVERPASALKEMLENSLDAGATRISVDLAQGGIKLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G+GI+ D L L +RHA TSK+ A +DD + T GFRGE LAS++ VS L + ++ H
Sbjct: 61 GAGIAADDLPLALDRHA-TSKI---ASLDDLESVSTLGFRGEGLASVASVSRLTLTSRPH 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ + +++ L+ ++ GT+V DL++N P RRK+++S + H
Sbjct: 117 DADHAH-QIIAIDGTLH-PVEPAAHPHGTSVEVVDLYFNTPARRKFLKSENTEYAHCA-A 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
RIAL HP+V F L + S+ +A L+ G + + +++ G L
Sbjct: 174 TFERIALAHPEVEFLLRHNGKVAWRLPSQSAEDRVAALL---GKDFVAAAIPLDSQAGPL 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+SG+++SP S + + QY Y+N R+V L +A L
Sbjct: 231 ALSGFVASPTYSKASRDAQYFYVNGRFVRDKTAQHALR------------QAYRDVLHHD 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
R PAY L S D+ P K V F++ + V F+ ++ A
Sbjct: 279 RH-----PAYALFFTLEPSGVDVNVHPTKIEVRFRESQAVHQFLFHSVHKA 324
Score = 40.8 bits (94), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 70/175 (40%), Gaps = 25/175 (14%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L ++D HAA ERI E L+ + E ++ Q L+LP +FA D
Sbjct: 461 LILVDMHAAHERIVYERLKAAL---ESDAIPL----QPLLLP-------VSFA---ADRM 503
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQ-LADTDGSS 1304
+ H G + L T I + VP V L D D +E + L D
Sbjct: 504 EVATAHEHGEEMKRLGVELAPLSPTQIAVRGVP----VWLKDGDPVELARAVLKDVREFG 559
Query: 1305 TTPPSVLR---VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
T R +L + AC GA+ L E ++ +++ T QC HGRPT
Sbjct: 560 LTQVLTERRNELLATMACHGAVRANRQLTLPEMNALLRDMEATERSGQCNHGRPT 614
>gi|303228550|ref|ZP_07315378.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-134-V-Col7a]
gi|302516797|gb|EFL58711.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-134-V-Col7a]
Length = 652
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 180/356 (50%), Gaps = 35/356 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGV-CNCYVKVVDD 59
M TI+ L E N + +G V+ VV+EL+ NS+DAGAT + V +G + Y+++ D+
Sbjct: 1 MATIHVLDETTINKIAAGEVVERPASVVKELIENSIDAGATSIEVEIGEGGSAYMRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + L RH ATSK+ ++ D+ D I + GFRGEALASI+ VS + T+
Sbjct: 61 GEGMTEEDARLAVLRH-ATSKIQNVEDLFD---IASLGFRGEALASIASVSHFVLTTRTV 116
Query: 120 GRPNGYRKVMKG---SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+ G R ++ G + C+ G GTT+ ++LF+N P RRK++++ +
Sbjct: 117 DQELGTRILIDGGTFTDCIPYGAAP-----GTTIEVKELFFNTPARRKFLKTE-RTESSK 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAN 235
++ V ++AL +P ++FK + +D + + P+ +++ +G + + + +
Sbjct: 171 IQDIVGKLALSNPHIAFK---LTIDDRVAIITPGTGPIQDTVAALYGYKTKNDIFPIAYE 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ I G +S P S + +Q + +N+R + I K ++ + + +G+
Sbjct: 228 SEHIYIEGVVSKPTLLKSTRIWQTIIVNNRVISDKTILKAID------NAYHALLPKSGY 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P LL++ P S+ D+ P K+ V F+D + + + AI +A
Sbjct: 282 -----------PLVLLHITVPASMVDINVHPRKSEVKFEDDKIIFKAVYHAILNAL 326
>gi|189030396|sp|A9KE32.1|MUTL_COXBN RecName: Full=DNA mismatch repair protein MutL
Length = 574
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 174/367 (47%), Gaps = 45/367 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I RL + N + +G V+ VV+EL+ NS+DA A+ + V + +++ DDG G
Sbjct: 3 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + LVL ERHA TSK+ A +DD I T GFRGEALASIS VS L + ++
Sbjct: 63 IHPEDLVLALERHA-TSKI---AKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAE 118
Query: 123 NGYR------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
GYR K+M + GTT+ +DLFYN P RRK+++ SP
Sbjct: 119 MGYRISNISHKIMTPVPAAH--------PQGTTIDVQDLFYNTPARRKFLR-SPATEFQH 169
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA-- 234
+++ + R+AL H + +F+ +E E++ S+++ I F+ A
Sbjct: 170 IRRIIERLALSH--FTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIE 227
Query: 235 -NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+ L + GYI+ + S QY+Y+N R+V I + L A D
Sbjct: 228 FSQSGLTLKGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQ--AYHDV-------- 277
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
G+ PAY+L L + D+ P K V F+D + V F+ A+++A +
Sbjct: 278 -LFHGRH------PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTALAQ 330
Query: 354 K---IAH 357
IAH
Sbjct: 331 AKPGIAH 337
>gi|415886658|ref|ZP_11548438.1| DNA mismatch repair protein [Bacillus methanolicus MGA3]
gi|387587345|gb|EIJ79668.1| DNA mismatch repair protein [Bacillus methanolicus MGA3]
Length = 637
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 199/420 (47%), Gaps = 40/420 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I +L + + N + +G V+ VV+ELV N++DAG+T + V + ++V+D+
Sbjct: 1 MGKIIQLDDLLSNKIAAGEVVERPASVVKELVENAIDAGSTIIEVEIEEAGMAKIRVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L +RH ATSK + D +D I T GFRGEAL SI+ VS LE+ T +
Sbjct: 61 GDGIEEEDVPLAFQRH-ATSK---IKDENDLFRIRTLGFRGEALPSIAAVSRLELKT-ST 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G + V+KG K + RK GT + DLF+N P R KY+++ + L ++
Sbjct: 116 GNDAGTKIVLKGGKVEKIEKSPSRK--GTDITVTDLFFNTPARLKYLKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL +P +SF+ + + +LL T + +L + +GI + ++
Sbjct: 173 VMNRLALGNPNISFRLV--HNGRKLLHTVGNGDVRQVLAAIYGINIVKKMIPISFESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+++GYIS P + + + + IN R++ P+ K + + + L
Sbjct: 231 QVTGYISLPEVTRASRNYITTMINGRFIKNYPLVKAIQ------------EGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
R P LLN++ L D+ P K V + + I+ A +
Sbjct: 279 R-----YPIVLLNIQMDPLLVDVNVHPAKMEVRLSKEHELNELVTTGIKQALKTQ----- 328
Query: 360 FDVDMLEDAELPLESSRFQSHQSSTHL-HSSPLKNLAKQRDHMFHKECERITFQEFQKDP 418
+++ ++ R ++ Q+ L H KN ++D H++ E ITF K+P
Sbjct: 329 ---ELIPSGIQQVKKERPKTEQTYMDLDHLPEWKNDLVEKD---HEKQEPITFTPAVKEP 382
>gi|429741030|ref|ZP_19274699.1| DNA mismatch repair protein [Porphyromonas catoniae F0037]
gi|429159699|gb|EKY02196.1| DNA mismatch repair protein [Porphyromonas catoniae F0037]
Length = 639
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 174/384 (45%), Gaps = 44/384 (11%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
I LPE++ N + +G V+ +V+EL+ NS+DAGA++V V + G V+V D+G
Sbjct: 4 VIRLLPESIANQIAAGEVVPAPAYIVKELLENSIDAGASEVQVEILGAGREAVQVTDNGK 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+S + ERH ATSKL + D+D + T GFRGEALA+I+ V +E+ T+
Sbjct: 64 GMSPTDARMAFERH-ATSKLREIEDLDR---LSTMGFRGEALAAIASVCQVELRTRIAEL 119
Query: 122 PNGYRKVMKGSK--------CLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
G ++G++ C VGTT+ + ++FYN P RRK++++ +
Sbjct: 120 EVGTELRIEGARVKSSVPVAC----------PVGTTLRAMNIFYNTPGRRKHIEARKEST 169
Query: 174 -LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEV 232
L + K ++AL +P+VSF D+ L +SS +I G + L V
Sbjct: 170 ELGDIWKEFAKVALANPEVSFALRGTGKYDKAL---PASSLKERIIGIGGSKLSKALIPV 226
Query: 233 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 292
N I G+I +P ++ A QY ++N+R++ HK + F +
Sbjct: 227 NYESSFCSIRGFIGTPTTALKSGAQQYFFVNNRFIRHPYFHKAVMLAYEKFIPVGTQ--- 283
Query: 293 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
P Y L P D+ P KT V F D E + I +R A+
Sbjct: 284 --------------PHYFLYFTIPAGNIDVNIHPQKTDVRFLDGETIFQVIVSLLREAFS 329
Query: 353 KKIAHDSFDVDMLEDAELPLESSR 376
+ D D E+P R
Sbjct: 330 SHALAPTIDFDQETSIEIPAYQGR 353
>gi|422015307|ref|ZP_16361906.1| methyl-directed mismatch repair protein [Providencia
burhodogranariea DSM 19968]
gi|414099472|gb|EKT61113.1| methyl-directed mismatch repair protein [Providencia
burhodogranariea DSM 19968]
Length = 652
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 171/375 (45%), Gaps = 53/375 (14%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I L + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+
Sbjct: 1 MG-IQILSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGEKLIRIRDN 59
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI +D L+L RHA TSK+ A +DD I + GFRGEALASIS VS L + +K
Sbjct: 60 GSGIGKDELILALARHA-TSKI---ATLDDLEAIMSMGFRGEALASISSVSRLTLTSKPA 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ ++ +G + + + + GTTV DLFYN P RRK+M++ + H + +
Sbjct: 116 EQSEAWQSYAEG-RDMAVTVKPAAHPNGTTVEVLDLFYNTPARRKFMRTEKTEFGH-IDE 173
Query: 180 CVLRIALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIED 225
V RIAL P V+ K + + + E L C + L S+
Sbjct: 174 IVRRIALSRPDVAINLNHNGKLVKQYRAAHDEAQQERRLATICGTGFMQGALAISW---- 229
Query: 226 FSFLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDC 285
G L I G++ SP + V QY Y+N R + +L+NH
Sbjct: 230 ---------QHGDLGIKGWVVSPSNG-PVSDIQYCYVNGRMMRD----RLINHAIR---- 271
Query: 286 SDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIER 345
+A G L + PAY+L L D+ P K V F V FI +
Sbjct: 272 ----QAYEGHLDDNQQ-----PAYVLYLTIDPQQVDVNVHPAKHEVRFHQARLVHDFIYQ 322
Query: 346 AIRSAWMKKIAHDSF 360
+R+A + D
Sbjct: 323 GVRTALLNAYESDEL 337
>gi|344201595|ref|YP_004786738.1| DNA mismatch repair protein mutL [Muricauda ruestringensis DSM
13258]
gi|343953517|gb|AEM69316.1| DNA mismatch repair protein mutL [Muricauda ruestringensis DSM
13258]
Length = 615
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 172/346 (49%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAG+T + + ++VVDDG G
Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELMENAIDAGSTSIKLIIKDGGKALIQVVDDGVG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK+ D+ + + T GFRGEALASI+ ++ +++ T+
Sbjct: 65 MSETDARLSFERH-ATSKISSAQDLFN---LETKGFRGEALASIAAIAHVDMQTRTSSNE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++GSK + + K GT++ ++LF+N P RR +++S+ ++ H +
Sbjct: 121 VGTHLKIEGSKIVSQDVVATPK--GTSISVKNLFFNIPARRNFLKSNQVELRH-ITDEFH 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+ALVHP + F F + SE + + ++ FG + S L VN +++S
Sbjct: 178 RVALVHPNIEFHFYNNGSE---IFNLPIAKHRQRIVHIFGSKMESRLVPVNEETEVVKVS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+I P + + Q+ + N+R++ +H + + A+F+ G + K
Sbjct: 235 GFICKPEFAKKSRGEQFFFANNRFIKSPYLH---HAVVAAFE---------GLI-----K 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
S P Y L L S D+ P KT V F D + A + I+
Sbjct: 278 SDTYPGYFLFLDVDPSSIDINIHPTKTEVKFDDENTLYAILRSTIK 323
>gi|401564527|ref|ZP_10805414.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC6]
gi|400188737|gb|EJO22879.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC6]
Length = 633
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 176/357 (49%), Gaps = 35/357 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+ELV N++DAGAT V + + G +++V D+
Sbjct: 1 MTRIHVLDDTTINKIAAGEVVERPASVVKELVENAMDAGATAVEIEIMGGGVSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++R+ RHA TSK+ ++D+ + T GFRGEAL +I+ VS ++T+
Sbjct: 61 GRGMTREDAETAILRHA-TSKITSVSDLQT---VATLGFRGEALPTIASVSRFLLLTRQA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G K I+D ++GTTV DLF+N P R+K+++++ + +
Sbjct: 117 SDDLGTRVDILGGKTPE--IEDAGCEIGTTVRVEDLFFNTPARKKFLKTNTTEA-GKISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
V+R+AL P ++F+FI+ + L + L I S +G + L ++ DG
Sbjct: 174 YVIRLALSRPDIAFRFIN---NNRLTIMTAGDDSLRRTIESIYGRDAAGALIPLDFEDGD 230
Query: 239 LE--ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E I+GYIS P S +A+Q +N R + I K ++++ + GF
Sbjct: 231 AEIRITGYISKPSLIRSSRAWQTYIVNGRTIQNRAIAKAIDNVYRAL------VPKMGF- 283
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRS 349
P +L + P D+ P KT + F+D ++ V + AIRS
Sbjct: 284 ----------PLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKTVLDAIRS 330
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 50/204 (24%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1216
+ QVD +I + TL ++DQHAA ERI + L H +LS +
Sbjct: 447 IGQVDLTYIIAQSAQTLYIVDQHAAHERILFDRFSAQADGIPAQQMLVHAILSFDAHEAQ 506
Query: 1217 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
Y+D EL +G+ L G R + L
Sbjct: 507 YIDENAEL-FDRLGFHL-----------------EPAGEREYR--------------LTE 534
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV--LNSKACRGAIMFGDSLLPSEC 1334
P ++ ++ + E L L D ++ P+ LR + + ACR AI G+ L +
Sbjct: 535 APADIPLDEAEETIREILVSLGDLHAAT---PANLRQAGIATMACRAAIKAGEELNMRQM 591
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTV 1358
++++EL+ T F C HGRPT +
Sbjct: 592 EILLDELRSTPFPFTCPHGRPTIL 615
>gi|406025702|ref|YP_006706003.1| DNA mismatch repair protein mutL [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
gi|404433301|emb|CCM10583.1| DNA mismatch repair protein mutL [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
Length = 596
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 176/369 (47%), Gaps = 38/369 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M TI+ L + + N + +G V+ VV+EL+ N++DAG+ + + + ++V+DD
Sbjct: 1 MHTIHLLSDLLINQIAAGEVVQRPASVVKELLDNAIDAGSNNIKIIIKDAGKQLIQVIDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ + + E+HA TSK+ H DD + I T GFRGEA+ASI+ V+ +E+ T+ H
Sbjct: 61 GIGMDKVDARMCFEKHA-TSKIAH---TDDLSKIQTMGFRGEAMASIAAVAQVEMETRLH 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G ++GSK ++++ GT + ++LFYN P RR +++S+P +
Sbjct: 117 EAATGVFIAIEGSKI-------KKQEAISTSPGTKISVKNLFYNVPARRNFLKSNPVEFK 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
H +++ V AL ++ ++ + E + S ++ FG L
Sbjct: 170 HILEE-VQHAALARTEIGWRLYHNDIE---IYNLSPEKLSHRMVHLFGESYKKQLIPCKE 225
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
+ I GYI P + + Q++++N R+V K P LNH A D A +
Sbjct: 226 TTNMVAIQGYIGKPEQAKKTRGEQFLFVNQRFV-KSP---FLNH--AIKHAYDRLLATDS 279
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
F P Y + L L D+ P KT + F+D + + A ++ AI+ +
Sbjct: 280 F-----------PFYAIYLTIDPKLIDINVHPTKTEIKFQDEKALYAILQAAIKKSLATH 328
Query: 355 IAHDSFDVD 363
DS D D
Sbjct: 329 HVVDSLDFD 337
>gi|261823153|ref|YP_003261259.1| DNA mismatch repair protein [Pectobacterium wasabiae WPP163]
gi|261607166|gb|ACX89652.1| DNA mismatch repair protein MutL [Pectobacterium wasabiae WPP163]
Length = 661
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 171/359 (47%), Gaps = 33/359 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHA-TSKITTL---DDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 238
RIAL V+ I + +L+ ++ + G I +FL V+
Sbjct: 177 RIALARFDVA---ITLHHNGKLMRQYRAAPDKSQYERRLGTICGATFLQHALAVSWQHDD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P + + QY Y+N R + +L+NH +
Sbjct: 234 LTIHGWVADPVGAKQLPDMQYCYVNQRMMRD----RLINH-----------AIRQAYQDQ 278
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
R Q PAY+L L PH + D+ P K V F V FI +A+ S + A
Sbjct: 279 LRDDQQ--PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMSVLQQASA 334
>gi|375107802|ref|ZP_09754063.1| DNA mismatch repair protein MutL [Burkholderiales bacterium
JOSHI_001]
gi|374668533|gb|EHR73318.1| DNA mismatch repair protein MutL [Burkholderiales bacterium
JOSHI_001]
Length = 622
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 165/354 (46%), Gaps = 34/354 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVV-DDGSG 62
I LP+ + + + +G V+ VV ELV N++DAGA + + + VV DDG G
Sbjct: 26 IRELPDDLVSQIAAGEVVERPASVVRELVDNALDAGARNITLRLSAGGVRAIVVEDDGCG 85
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I L L +RHA TSK+ LAD++ +GT GFRGEALA+I+ V+ + I ++ G P
Sbjct: 86 IPAAQLALALKRHA-TSKISDLADLES---VGTMGFRGEALAAIASVAEVAITSRMAGDP 141
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+ +R + + + GTTV R+LF++ P RRK++++ ++ H V + V
Sbjct: 142 SAHRISAHTGE-----LQPAARATGTTVEVRELFFSTPARRKFLKTDATELAHCV-EAVR 195
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFS---FLDEVNANDGAL 239
R AL P V F E +L ++ P L G + + L + GA+
Sbjct: 196 RHALARPDVGFAIW---HEGKLNAQWRAAEPEQRLADVLGADFMAASRALPPLPQAFGAV 252
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+SG + P + + QY Y+N R+V +L+ H A L G
Sbjct: 253 RLSGRVGLPDAARARADMQYAYVNGRFVRD----RLVGH--------GVRAAYEDVLHGS 300
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
R P+Y+L + P D+ P K V F+D V + A+ A +
Sbjct: 301 RQ-----PSYVLFIDMPPQRVDVNVHPTKIEVRFRDSREVHQAVRHAVEDALAR 349
Score = 45.1 bits (105), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 27/187 (14%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L ++D HAA ERI E L+ + + A L A Q L+LP A
Sbjct: 452 LVLVDMHAAHERIVYERLKAQ------QGDAALQA-QPLLLPVAVPATPTEMATAEAHAA 504
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQ----LADTD 1301
+ ++ L++ + + + + P L D DL E L+ LA D
Sbjct: 505 TLADL----------GLDVAPLSASTLAVRSRPA----ALPDADLAELLRSVLADLAQVD 550
Query: 1302 GSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT--TVP 1359
GS + +L + AC GA+ L E ++ +++ T QC HGRPT V
Sbjct: 551 GSRVVQRARDELLATMACHGAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWRQVT 610
Query: 1360 LVNLEAL 1366
L L+AL
Sbjct: 611 LKELDAL 617
>gi|138894827|ref|YP_001125280.1| DNA mismatch repair protein [Geobacillus thermodenitrificans
NG80-2]
gi|166232089|sp|A4IMI1.1|MUTL_GEOTN RecName: Full=DNA mismatch repair protein MutL
gi|134266340|gb|ABO66535.1| DNA mismatch repair protein MutL [Geobacillus thermodenitrificans
NG80-2]
Length = 645
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 168/364 (46%), Gaps = 28/364 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I++L + + N + +G V+ VV+ELV N++DA +T V + + ++V+D+
Sbjct: 1 MGRIHKLDDQLANKIAAGEVVERPASVVKELVENAIDAHSTAVEIELEEAGMTKIRVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ + +L ERHA TSK+ D D I T GFRGEAL SI+ VS +E++T
Sbjct: 61 GDGMEEEDCLLAFERHA-TSKI---QDEHDLFRIRTLGFRGEALPSIASVSEVELVTSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G + V+KG + RK GT + +LF+N P R KYM++ ++ H+
Sbjct: 117 SGP-GTKLVLKGGALVARERAAGRK--GTDITVSNLFFNTPARLKYMKTIHTELGHAA-D 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP VSF+ LL T S +L + +G+E + + A
Sbjct: 173 VVNRLALAHPDVSFRL--RHHGKTLLATNGSGDVRHVLAAIYGMETAKQMIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ GYIS P + + + + + +N RYV P+ K + + L
Sbjct: 231 TVRGYISLPEVTRASRNYMSLIVNGRYVRNIPLMKAIE------------AGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
R P L + L D+ P K V F + I IR A+ ++ S
Sbjct: 279 R-----YPIVFLAIEMDPVLVDVNVHPAKLEVRFSKEAELNELITATIRQAFRQRTLIPS 333
Query: 360 FDVD 363
D
Sbjct: 334 VSAD 337
>gi|225378111|ref|ZP_03755332.1| hypothetical protein ROSEINA2194_03771 [Roseburia inulinivorans DSM
16841]
gi|225210112|gb|EEG92466.1| hypothetical protein ROSEINA2194_03771 [Roseburia inulinivorans DSM
16841]
Length = 647
Score = 130 bits (326), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 209/459 (45%), Gaps = 48/459 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ + VV+ELV N++DA AT V V + ++++ D+
Sbjct: 1 MPEIMLLNQETIDKIAAGEVVERPSSVVKELVENAIDAKATAVTVEIKEGGISFIRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + + RH+ TSK+ ++D I + GFRGEAL+SI+ V+ +E+ITK +
Sbjct: 61 GCGIEKKQVPIAFLRHS-TSKI---RSVEDLLSIHSLGFRGEALSSIAAVAQVELITKTY 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV--GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G R V++GSK I++E GTT + R+LFYN P RRK+++++ + + +
Sbjct: 117 EELTGTRYVIEGSK----EIENEEIGAPEGTTFIVRNLFYNVPARRKFLKTAQTEAGY-I 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R+AL HP VSFKFI+ + L T + + L+ +G + S + +V
Sbjct: 172 SDLMERMALSHPDVSFKFIN--NGQTKLHTSGNGNEKDLIYHIYGRDITSAVLKVEHETE 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
++ G+I P S + ++ +IN RY+ I K + +A GF+
Sbjct: 230 LFKLRGFIGKPMISRGNRNYENYFINGRYIKSALIAKSIE------------EAYKGFM- 276
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
P +L L D+ P K + F E + + IR I+H
Sbjct: 277 ----MQHQYPFCVLYFEMDSELLDVNVHPTKMELRFSQNEEIYHSLFEIIRDT----ISH 328
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHK----ECERITFQE 413
F E+P+ + ++ P + + +D F K +T QE
Sbjct: 329 RDF------IPEVPVTEEKKETIPPVPKHTPEPFEIRRRGQDAFFEKMKQTSASPLTVQE 382
Query: 414 ---FQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECL 449
F K AE NT E ++ L+ +F E +
Sbjct: 383 ENLFAKPLAAEAETNTSKEPIAEIHSEQPTLENNFKEIV 421
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 26/210 (12%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1218
+ K + K++ Q+ + + L +IDQHAA E++ L E K +S + + +
Sbjct: 451 LTKDARKKHKIIGQLFDTYWLIEYEDKLFIIDQHAAHEKV-LYERTMKKISEKTFTSQTI 509
Query: 1219 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1278
L L + Q L+ + Q+ +G+ I G + + + A+P
Sbjct: 510 SPPIILTLNQDEVQALETYEAQLSMFGY--EIEPFGGKEY--------------AITAIP 553
Query: 1279 CIFGVNLSDVDL----LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSEC 1334
F +D+D+ +E L A+ G P ++ + S +C+ A+ + L E
Sbjct: 554 ADF----TDIDMKTMFIEMLDDFANISGKDA-PNLIMEKVASMSCKAAVKGNNHLSRPEI 608
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
+++EL + + C HGRPT + + E
Sbjct: 609 EALIDELLELDNPYNCPHGRPTIISMTKYE 638
>gi|346306309|ref|ZP_08848467.1| hypothetical protein HMPREF9457_00176 [Dorea formicigenerans
4_6_53AFAA]
gi|345900114|gb|EGX69942.1| hypothetical protein HMPREF9457_00176 [Dorea formicigenerans
4_6_53AFAA]
Length = 687
Score = 130 bits (326), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 178/379 (46%), Gaps = 31/379 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ VV+EL N++DAGAT V V + G+ ++++
Sbjct: 1 MSKIQVLDQITIDKIAAGEVIERPASVVKELAENAIDAGATAVTVEIKEGGIT--FMRIA 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI ++ + RH+ TSK+ +D I + GFRGEAL+SI+ VS +E++TK
Sbjct: 59 DNGIGIDKEDVRAAFLRHS-TSKI---RSAEDLAHISSLGFRGEALSSIAAVSQVELLTK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G R + G K L +D GTT + R LFYN P RRK+++++ + H V
Sbjct: 115 TKEAEFGVRYKIAGGKEESL--EDAGAPDGTTFLIRQLFYNTPARRKFLKTAMTEASH-V 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
V R+AL HP+VSF+FI+ + L T + + ++ +G E S L EV+
Sbjct: 172 GDLVTRLALSHPEVSFRFIN--NGQVKLHTSGNGNLKDVIYHIYGREIASNLIEVDFERK 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ I+GY+ P S + F+ +++ RY+ I K + F +
Sbjct: 230 GIHITGYLGKPLISRGNRNFENYFVDGRYIKSSIISKAIEDGYKDFTMQHKY-------- 281
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
P +L L D+ P K V F + + + + A+ ++
Sbjct: 282 ---------PFVVLYLDVDTEHVDVNVHPTKMDVRFNNQQEIYNTLFAAVDDGLHERELI 332
Query: 358 DSFDVDMLEDAELPLESSR 376
+D ++ E P ES +
Sbjct: 333 PEVTLDDIKIPEEPKESKK 351
>gi|224536053|ref|ZP_03676592.1| hypothetical protein BACCELL_00917, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522336|gb|EEF91441.1| hypothetical protein BACCELL_00917 [Bacteroides cellulosilyticus
DSM 14838]
Length = 564
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 181/370 (48%), Gaps = 46/370 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A ++ V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQEIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ D+ + T GFRGEALAS++ V+ +E+ T+
Sbjct: 65 MSETDARLAFERHA-TSKIRQATDL---FALRTMGFRGEALASVAAVAEVELKTRMANEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRIVIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F + S D L + +++ FG + L V+ +
Sbjct: 174 TEFERIALVHPEVAFY---LYSNDTELFNLPAMPLRQRILAVFGKKLNQHLLSVDVDTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SG+++ P + A QY ++N RY+ HK + D+++
Sbjct: 231 VKVSGFVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 -----QLIPAGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQIVSAAVKESLGK 328
Query: 354 KIAHDSFDVD 363
A S D D
Sbjct: 329 FNAVPSIDFD 338
>gi|215919100|ref|NP_820082.2| DNA mismatch repair protein [Coxiella burnetii RSA 493]
gi|206583985|gb|AAO90596.2| DNA mismatch repair protein [Coxiella burnetii RSA 493]
Length = 575
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 172/363 (47%), Gaps = 42/363 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + N + +G V+ VV+EL+ NS+DA A+ + V + +++ DD
Sbjct: 1 MMYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + LVL ERHA TSK+ A +DD I T GFRGEALASIS VS L + ++
Sbjct: 61 GDGIHPEDLVLALERHA-TSKI---AKIDDLQDITTLGFRGEALASISAVSRLTLTSRQK 116
Query: 120 GRPNGYR------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
GYR K+M + GTT+ +DLFYN P RRK+++ SP
Sbjct: 117 NAEMGYRISNISHKIMTPVPAAH--------PQGTTIDVQDLFYNTPARRKFLR-SPATE 167
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 233
+++ + R+AL H + +F+ +E E++ S+++ I F+
Sbjct: 168 FQHIRRIIERLALSH--FTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSAL 225
Query: 234 A---NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWK 290
A + L + GYI+ + S QY+Y+N R+V + + L A D
Sbjct: 226 AIEFSQSGLTLKGYIAEAAYTRSQPDLQYIYVNGRFVRDKLVAQALRQ--AYHDV----- 278
Query: 291 ANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
G+ PAY+L L + D+ P K V F+D + V F+ A+++A
Sbjct: 279 ----LFHGRH------PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTA 328
Query: 351 WMK 353
+
Sbjct: 329 LAQ 331
>gi|389746789|gb|EIM87968.1| hypothetical protein STEHIDRAFT_54062 [Stereum hirsutum FP-91666
SS1]
Length = 839
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 169/362 (46%), Gaps = 28/362 (7%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGV--CNCYVKVVDDG 60
+++ LP VR +RS +L L +V+ ELV NS+DA + + V V C+VK DDG
Sbjct: 9 SLSLLPPPVRTKIRSTQILTSLPQVISELVQNSLDANSHHIEVGVDCEEWECWVK--DDG 66
Query: 61 SGISRDGLVLL--GERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 118
G+S++G+ +L E + A TFGFRGEALAS D+S EI ++
Sbjct: 67 EGMSKEGMGMLRKAEEEGRYNTSKTYAPPPGVDTPSTFGFRGEALASAVDISCFEISSRT 126
Query: 119 HGRPNGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+ ++K +CLY G + R+ GT V RD+FYN P+RR S+P K L
Sbjct: 127 ASSRQSWALIIKNGQCLYEGSAVRWRRETPGTVVCLRDIFYNLPIRR-ISHSNPSKTLDL 185
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
++K + ALV P+VSF D E+ S A + S I + V
Sbjct: 186 IQKEMQSFALVFPEVSFSVEDTHKAREV------GSERARVTS---IPKVRPIIHVADGV 236
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNG 294
A + G S+ Y + F V +N + +H L+ L +SF + +A
Sbjct: 237 AACRVGGG-STNY----LHTFCGVDVNRHLLSPTSLHHLIEDLFSNSSFTKNALDEAGAT 291
Query: 295 FLKGKR---SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
L R KS+ P Y+LNL P D F+P K+ V F + + V + IRS
Sbjct: 292 SLPPSRRSPRKSECKPVYVLNLTLPPRTVDNGFEPSKSTVRFANNDTVTTLLTSVIRSFL 351
Query: 352 MK 353
+K
Sbjct: 352 IK 353
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 82/271 (30%)
Query: 1164 LEDAKVLQQVDKKFI--------PVVA-----------------GGTLAVIDQHAADERI 1198
L+DA+V+ Q D+KF+ P G L +IDQHAA ER+
Sbjct: 571 LKDAEVIAQADRKFVVCCIDERVPSATNVEEGGEPGRGTGGSDHGRALVLIDQHAASERV 630
Query: 1199 RLEELRHKV--------------------LSGEGKSVAYLDAEQELVLPEIGYQLL---Q 1235
R+E ++ + E + V L+ + ++L ++L +
Sbjct: 631 RVERFLKRICVRFLTGSKDGKGKGKEGDGIEEEQEEVMELEPPKPVLLTMREVEILREKE 690
Query: 1236 NFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQ 1295
+ + WG +G K+ N Q+ V+++ V + L+ +L E ++
Sbjct: 691 DVRALLSRWGIDVLFEGEGEADVEKDRNAAYGQVWVMSVPEV--VVKKLLAGNELQELIK 748
Query: 1296 QL---ADTDGSSTTPPSV-----------------------------LRVLNSKACRGAI 1323
+ D TPP++ L ++NS+ACRGAI
Sbjct: 749 GFLASVENDEIPGTPPAIDYASDKDLESDSTDDFWWQKALRWCPRGLLDLVNSRACRGAI 808
Query: 1324 MFGDSLLPSECALIVEELKQTSLCFQCAHGR 1354
MF D+L +C ++ L +T+ FQCAHGR
Sbjct: 809 MFNDTLNLEQCERLLARLSETAYPFQCAHGR 839
>gi|288803871|ref|ZP_06409296.1| DNA mismatch repair protein MutL [Prevotella melaninogenica D18]
gi|288333636|gb|EFC72086.1| DNA mismatch repair protein MutL [Prevotella melaninogenica D18]
Length = 630
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 169/349 (48%), Gaps = 32/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV N++DAGAT + + V ++V+DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGATHIDVLVVDAGRTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK + DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERH-ATSK---IRKADDLFSLRTMGFRGEALASIAAVAQIELKTRMESED 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + GS+ ++G + VG+ + +LF+N P RRK+++S+ + L+++
Sbjct: 121 LGTHLSIAGSR--FMGQEPCSCPVGSNFLVENLFFNVPARRKFLKSNTTE-LNNIITAFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI LV+P++SF +E L CS ++ FG L ++ + I
Sbjct: 178 RIVLVYPQISFTLHSNGTELFSLRACSYRQ---RIVEVFGKRLNQDLLPIDVDTSLCHIH 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + QY ++N RY+ HK + +FD +
Sbjct: 235 GFVGKPESARKKAPHQYFFVNDRYMKHPYFHK---AVITAFD-------------RLIPQ 278
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAI 347
+ P Y L P D+ P KT + F++ W+ +LA ++ A+
Sbjct: 279 GEQVP-YFLYFDVPAENIDVNIHPTKTEIKFENEQAIWQILLAAVKEAV 326
>gi|194337682|ref|YP_002019476.1| DNA mismatch repair protein MutL [Pelodictyon phaeoclathratiforme
BU-1]
gi|238693415|sp|B4SGC3.1|MUTL_PELPB RecName: Full=DNA mismatch repair protein MutL
gi|194310159|gb|ACF44859.1| DNA mismatch repair protein MutL [Pelodictyon phaeoclathratiforme
BU-1]
Length = 626
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 176/354 (49%), Gaps = 34/354 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I RLP+ V N + +G V+ VV+EL+ N++DAGA K+ V + +++VD+
Sbjct: 1 MARIARLPDIVANKISAGEVVQRPASVVKELLENAIDAGADKITVAIKDAGKELIRIVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G+G+ R+ +L ER ATSK+ + D+D + + GFRGEALASIS VS E+ T+
Sbjct: 61 GAGMLREDALLCVERF-ATSKITGVDDLD---SLQSLGFRGEALASISSVSHFELKTRTA 116
Query: 120 GRPNGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R +G + G+ E+ GTT+ R+LFYN P RRK+++S+ + H +
Sbjct: 117 KATLGLRLRYEGGVLVEESGVQGEQ---GTTISVRNLFYNVPARRKFLKSNATEYNH-IF 172
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ V AL +P++ ++ M S+DE L L L +G + + + E++ +
Sbjct: 173 EIVKSFALAYPEIEWR---MYSDDEELFHVKRPDILERLNVFYGDDFAASMIELSEENDY 229
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I GY+ P K QY ++N R V +++L S + + G L
Sbjct: 230 LSIKGYLGKPAMQKRRKLDQYFFVNRRVVQ----NRML---------SQAVQQAYGDLLV 276
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV----LAFIERAIR 348
+R P LL L S D+ P K + F D V I+RAI+
Sbjct: 277 ERQ----TPFVLLFLTIDPSRIDVNVHPAKMEIRFDDERNVRNMFYPVIKRAIQ 326
Score = 40.4 bits (93), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 20/205 (9%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
K+ Q +K I + G L +IDQH A ER+ L E V++ + L Q++
Sbjct: 441 KIWQLHNKYLICQIKTG-LMIIDQHVAHERV-LYERAVDVMNQNVPNSQQLLFPQKVEFR 498
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1287
Y++ + E + G+ NL L + +I + G S+
Sbjct: 499 PWEYEIFEEIREDLYRLGF--------------NLRLFGNKTIMIEGVPQDVKPG---SE 541
Query: 1288 VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1347
V +L+ + + S + S +CR AIM G L E +++ L T
Sbjct: 542 VTILQDMIAEYQDNASKLKLDKRDNLAKSYSCRNAIMAGQKLSLEEMRSLIDNLFATREP 601
Query: 1348 FQCAHGRPTTVPLVNLEALHKQIAQ 1372
+ C HGRP + L +L+ L K +
Sbjct: 602 YSCPHGRPVIIKL-SLDQLDKMFGR 625
>gi|384256322|ref|YP_005400256.1| DNA mismatch repair protein [Rahnella aquatilis HX2]
gi|380752298|gb|AFE56689.1| DNA mismatch repair protein [Rahnella aquatilis HX2]
Length = 639
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 186/384 (48%), Gaps = 45/384 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IKVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RH ATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARH-ATSKITCL---DDLEAILSLGFRGEALASISSVSRLILTSRTAEQN 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I G+TV DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTIKPAAHPQGSTVEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSS-------SSPLALLISSFGIEDFSFLDEVNAN 235
RIAL VS +++ +L+ + S LA + S +E EV +
Sbjct: 177 RIALARFDVS---VNLSHNGKLIRQYRAVKDRSQFSRRLASICSPAFVEHAL---EVEWS 230
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
G L I G+++ P S S+ QY Y+N+R + +L+NH A D K +
Sbjct: 231 HGDLAIRGWVADPAGSRSLTDMQYCYVNNRMMKD----RLINH-AIRQAYQDQLKDDQQ- 284
Query: 296 LKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
PAY+L L PH + D+ P K V F V FI +A+ S +
Sbjct: 285 -----------PAYVLYLDVDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQAVMSVLQQA 332
Query: 355 IAHDSFDVDMLEDAELPLESSRFQ 378
A +L++ +L ++ R+Q
Sbjct: 333 GA------PVLDEPQLQEDTPRWQ 350
>gi|196247547|ref|ZP_03146249.1| DNA mismatch repair protein MutL [Geobacillus sp. G11MC16]
gi|196212331|gb|EDY07088.1| DNA mismatch repair protein MutL [Geobacillus sp. G11MC16]
Length = 645
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 168/364 (46%), Gaps = 28/364 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I++L + + N + +G V+ VV+ELV N++DA +T V + + ++V+D+
Sbjct: 1 MGRIHKLDDQLANKIAAGEVVERPASVVKELVENAIDAHSTAVEIELEEAGMTKIRVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ + +L ERHA TSK+ D D I T GFRGEAL SI+ VS +E++T
Sbjct: 61 GDGMEEEDCLLAFERHA-TSKI---QDEHDLFRIRTLGFRGEALPSIASVSEVELVTSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G + V+KG + RK GT + +LF+N P R KYM++ ++ H+
Sbjct: 117 SGP-GTKLVLKGGALVARERAAGRK--GTDITVSNLFFNTPARLKYMKTIHTELGHAA-D 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP VSF+ LL T S +L + +G+E + + A
Sbjct: 173 VVNRLALAHPDVSFRL--RHHGKTLLATNGSGDVRHVLAAIYGMETAKQMIPIEAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ GYIS P + + + + + +N RYV P+ K + + L
Sbjct: 231 TVRGYISLPEVTRASRNYMSLIVNGRYVRNIPLMKAIE------------AGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
R P L + L D+ P K V F + I IR A+ ++ S
Sbjct: 279 R-----YPIVFLAIEMDPVLVDVNVHPAKLEVRFSKEAELNELITATIRQAFRQRTLIPS 333
Query: 360 FDVD 363
D
Sbjct: 334 VSAD 337
>gi|189502520|ref|YP_001958237.1| hypothetical protein Aasi_1174 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497961|gb|ACE06508.1| hypothetical protein Aasi_1174 [Candidatus Amoebophilus asiaticus
5a2]
Length = 628
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 164/348 (47%), Gaps = 28/348 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
+ LP+++ N + +G V+ VV+ELV N+VDA +T + V + ++V+DDG G
Sbjct: 6 VRLLPDSLANQIAAGEVIQRPASVVKELVENAVDAASTHIKVVIKDAGKTLIQVIDDGIG 65
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + E+HA TSK+ + DD I T GFRGEAL SI+ ++ +EI T+
Sbjct: 66 MSEVDARMSLEKHA-TSKI---SQADDLFNIRTMGFRGEALPSIAAIAQVEIETRTEDAE 121
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G R V++GSK K GTT+ ++LF+N P RR +++S P + H +++
Sbjct: 122 LGTRLVVEGSKIKLQEPVATTK--GTTISVKNLFFNVPARRNFLKSEPVETKHIIEEF-Q 178
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
IAL P +SF E E L ++ + L FG L ++I
Sbjct: 179 HIALARPDISFSLYQNEQETYHLPATKLANRIVHL---FGETYKKQLIPCQEGTDIIQIH 235
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GY+ +P + + Q+ ++N+R++ +H + D++
Sbjct: 236 GYVGNPSYAKKTRGEQFFFVNNRFIKSTYLHHAVKSAFEELIPKDTF------------- 282
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P Y+L + D+ P KT + F D V + ++ ++R A
Sbjct: 283 ----PFYVLFIEISPERIDVNVHPTKTEIKFDDERMVYSILQASVRQA 326
>gi|406658846|ref|ZP_11066986.1| DNA mismatch repair protein HexB [Streptococcus iniae 9117]
gi|405579061|gb|EKB53175.1| DNA mismatch repair protein HexB [Streptococcus iniae 9117]
Length = 652
Score = 130 bits (326), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 168/351 (47%), Gaps = 33/351 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA + ++ + + +K+ D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPASVVKELVENAIDAKSNQITIEIEESGLKSIKITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S+D L L RHA TSK+ + +D+ I T GFRGEAL SI+ +S L I T
Sbjct: 61 GEGMSKDDLPLSILRHA-TSKIKNQSDL---FRIRTLGFRGEALPSIASISELTIETATE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G + KG K +D VGT + +LFYN P R KYM+S ++ H V
Sbjct: 117 DSSHGSILMSKGGKV--EKVDVISTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
V R++L HP+V+F I + L S + L I+ +G+ + E++ D
Sbjct: 174 VVNRLSLGHPEVAFTLI---CDGRELTKTSGTGDLKQAIAGIYGLNTAKKMVEISNADLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
E+SGY+S P + + + + + IN RY+ ++ N L G
Sbjct: 231 FEVSGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRAILDG 271
Query: 299 KRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
SK P +++++ L D+ P K V + ++A I AI
Sbjct: 272 YGSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|429737002|ref|ZP_19270876.1| DNA mismatch repair protein [Selenomonas sp. oral taxon 138 str.
F0429]
gi|429153636|gb|EKX96414.1| DNA mismatch repair protein [Selenomonas sp. oral taxon 138 str.
F0429]
Length = 633
Score = 130 bits (326), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 175/357 (49%), Gaps = 35/357 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+ELV N++DAGAT V + + G +++V D+
Sbjct: 1 MTRIHVLDDTTINKIAAGEVVERPASVVKELVENAMDAGATAVEIEIMGGGVSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R+ RHA TSK+ ++D+ + T GFRGEAL +I+ VS ++T+
Sbjct: 61 GRGMMREDAETAILRHA-TSKITSVSDLQT---VATLGFRGEALPTIASVSRFSLLTRQA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G K I+D ++GTTV DLF+N P R+K+++++ + +
Sbjct: 117 SDDLGTRVDILGGKTPE--IEDAGCEIGTTVRVEDLFFNTPARKKFLKTNTTEA-GKISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
V+R+AL P ++F+FI+ + L + L I S +G + L ++ DG
Sbjct: 174 YVIRLALSRPDIAFRFIN---NNRLTIMTAGDDSLRRAIESIYGRDAAGALIPLDFEDGD 230
Query: 239 LE--ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E I+GYIS P S +A+Q +N R + I K ++++ + GF
Sbjct: 231 AEIRITGYISKPSLIRSSRAWQTYIVNGRTIQNRAIAKAIDNVYRAL------VPKMGF- 283
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRS 349
P +L + P D+ P KT + F+D ++ V + AIRS
Sbjct: 284 ----------PLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKSVLDAIRS 330
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 50/204 (24%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1216
+ QVD +I + TL ++DQHAA ERI + L H +LS +
Sbjct: 447 IGQVDLTYIIAQSAQTLYIVDQHAAHERILFDRFSAQADGIPSQQMLVHAILSFDAHEAQ 506
Query: 1217 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
Y+D EL +G+ L G R + L
Sbjct: 507 YIDENAEL-FDRLGFHL-----------------EPAGEREYR--------------LTE 534
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV--LNSKACRGAIMFGDSLLPSEC 1334
P ++ ++ + E L L D ++ P+ LR + + ACR AI G+ L +
Sbjct: 535 APADIPLDEAEETIREILVSLGDLHAAT---PANLRQAGIATMACRAAIKAGEELNVRQM 591
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTV 1358
++++EL+ T F C HGRPT +
Sbjct: 592 EILLDELRSTPFPFTCPHGRPTIL 615
>gi|288924573|ref|ZP_06418510.1| DNA mismatch repair protein MutL [Prevotella buccae D17]
gi|288338360|gb|EFC76709.1| DNA mismatch repair protein MutL [Prevotella buccae D17]
Length = 621
Score = 130 bits (326), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 176/372 (47%), Gaps = 28/372 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV NSVDAGAT + V V ++V D+G G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGATVINVLVVDAGRTSIQVTDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK+ DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSDTDARLSFERH-ATSKIRQ---ADDLFALHTMGFRGEALASIAAVAQVELKTRQQSDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + + GS+ +LG + VG+ +LF+N P RRK+++S+ + L+++
Sbjct: 121 VGTQLTIAGSR--FLGQEPCSCPVGSNFKVENLFFNVPARRKFLKSNTTE-LNNIIAAFQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI LV+P +SF + S D L + + ++ FG L VN I
Sbjct: 178 RIVLVYPALSFT---LHSNDTELINLRAGNLRQRIVDVFGKRLNQDLLSVNVETTLCSIH 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A QY ++N RY+ K P KA + +
Sbjct: 235 GFVGKPESARKKGAHQYFFVNGRYM-KHPYFA---------------KAVMSAFERLVPQ 278
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
+ P +L P ++ D+ P KT + F++ + + + A+R A + D
Sbjct: 279 GEQVPFFLYFEVAPENI-DVNIHPTKTEIKFENEQAIWQILSAAVREAVGMFNDVPAIDF 337
Query: 363 DMLEDAELPLES 374
D + ++P+ S
Sbjct: 338 DTVGKPDIPVFS 349
>gi|148543761|ref|YP_001271131.1| DNA mismatch repair protein [Lactobacillus reuteri DSM 20016]
gi|184153167|ref|YP_001841508.1| DNA mismatch repair protein [Lactobacillus reuteri JCM 1112]
gi|325682133|ref|ZP_08161651.1| DNA mismatch repair protein HexB [Lactobacillus reuteri MM4-1A]
gi|167017343|sp|A5VIX0.1|MUTL_LACRD RecName: Full=DNA mismatch repair protein MutL
gi|229486324|sp|B2G6E6.1|MUTL_LACRJ RecName: Full=DNA mismatch repair protein MutL
gi|148530795|gb|ABQ82794.1| DNA mismatch repair protein MutL [Lactobacillus reuteri DSM 20016]
gi|183224511|dbj|BAG25028.1| DNA mismatch repair protein HexB [Lactobacillus reuteri JCM 1112]
gi|324978777|gb|EGC15726.1| DNA mismatch repair protein HexB [Lactobacillus reuteri MM4-1A]
Length = 668
Score = 130 bits (326), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 181/374 (48%), Gaps = 35/374 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L + N + +G V+ +V+ELV NS+DA + +V + V V+V+DD
Sbjct: 1 MGKIHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + + L RH ATSK+ D+ + T GFRGEAL SI+ V+ + + T
Sbjct: 61 GDGIAAEDISLAFHRH-ATSKINSRHDL---FKVQTMGFRGEALPSIASVADVTLTTAQA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G+ G ++G K L + R+ GT + DLF+N P R KY++ SP+ L +
Sbjct: 117 GQEEGTMIHLRGGKELVVKPAGARQ--GTDIKVTDLFFNTPARLKYLK-SPQTELTRITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL +P V+F F + EL + +++ ++ + +G++ + E++ D
Sbjct: 174 IINRLALANPAVAFSF--THNGRELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++SG++S P + + + + + IN RY+ +++ ++G
Sbjct: 232 KVSGFVSLPELTRASRQYITITINHRYIR-------------------NFELTKAIIQGY 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++N+ L D+ P K V + ++ I IR ++IA
Sbjct: 273 ESKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLIKLIAETIR----QRIAV 328
Query: 358 DSFDVDMLEDAELP 371
++ D+ D +P
Sbjct: 329 ENLIPDVDADQFIP 342
>gi|448734873|ref|ZP_21717093.1| DNA mismatch repair protein MutL [Halococcus salifodinae DSM 8989]
gi|445799503|gb|EMA49882.1| DNA mismatch repair protein MutL [Halococcus salifodinae DSM 8989]
Length = 724
Score = 130 bits (326), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 167/371 (45%), Gaps = 45/371 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I+RL +A + +G V+ V+ELV NS+DA A++V V V ++V DDG G
Sbjct: 14 IHRLDQATIERIAAGEVVERPASAVKELVENSLDADASRVRVVVEAGGTDGIRVTDDGRG 73
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ + + E+H TSK+ + D++ G+G+ GFRGEALA+I VS L I TKA G
Sbjct: 74 MTAEAVERAVEKHT-TSKIADIDDLE--AGVGSLGFRGEALAAIGAVSRLTIRTKARGTS 130
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G M G + ++ GTTV DLFYN P RRKY++ + H V +
Sbjct: 131 RGTELRMAGGEIES--VEPAGCPEGTTVEVEDLFYNVPARRKYLKQDATEFTH-VNRVTT 187
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG--IEDFSFLDEVNAN----- 235
AL +P V+ E+ T S A ++S +G + + L E +A+
Sbjct: 188 GYALSNPDVALAL--EHDGREVFSTTGQGSLEATILSVYGRDVAEAMILVEAHADSESDG 245
Query: 236 -----------DGAL-EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
DG L E+SG +S P + + + V++N RYV + +
Sbjct: 246 ADGGNDEERDTDGPLDELSGVVSHPETTRASPEYCSVFVNGRYVSATAVRDAI------- 298
Query: 284 DCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 343
+A G L R P +L L P D+ P K + F D V +
Sbjct: 299 -----VEAYGGQLAPDR-----YPFTVLFLSLPADTIDVNVHPRKREIRFADEADVREQV 348
Query: 344 ERAIRSAWMKK 354
A+ A M++
Sbjct: 349 RTAVEDALMRE 359
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 1155 IPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS 1214
+PD L +VL Q+ +I + L +IDQHAADERI E LR +V +GE
Sbjct: 515 VPDDHAFDRLPRLRVLGQLHDTYIACESPDGLVLIDQHAADERINYERLRERV-AGETAI 573
Query: 1215 VAYLD-AEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVIT 1273
D E EL E+ +L ++FA+ + + G+ + SR+ ++ +
Sbjct: 574 QELADPVEIELTAAEV--ELFESFADALAELGF------EASRADDRT----------VE 615
Query: 1274 LLAVPCIFGVNLSDVDLLEFLQQ--LADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLP 1331
+ AVP + +D D L + + D + ++ +L AC +I SL
Sbjct: 616 VRAVPAVLD-GAADPDRLRDVLSGFVGDEEPEASIERDADALLADLACYPSITGNTSLAE 674
Query: 1332 SECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
+ ++ L + C HGRP + + N E
Sbjct: 675 GDVIDLLRTLDDCENPYACPHGRPVVIEVGNDE 707
>gi|402307173|ref|ZP_10826200.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella
sp. MSX73]
gi|400379013|gb|EJP31862.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella
sp. MSX73]
Length = 621
Score = 130 bits (326), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 175/370 (47%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV NSVDAGAT + V V ++V D+G G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGATVINVLVVDAGRTSIQVTDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK+ DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSDTDARLSFERH-ATSKIRQ---ADDLFALHTMGFRGEALASIAAVAQVELKTRQQSDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + + GS+ +LG + VG+ +LF+N P RRK+++S+ + L+++
Sbjct: 121 VGTQLTIAGSR--FLGQEPCSCPVGSNFKVENLFFNVPARRKFLKSNTTE-LNNIIAAFQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI LV+P +SF + S D L + + ++ FG L VN I
Sbjct: 178 RIVLVYPALSFT---LHSNDTELINLRAGNLRQRIVDVFGKRLNQDLLSVNVETTLCSIH 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A QY ++N RY+ K P KA + +
Sbjct: 235 GFVGKPESARKKGAHQYFFVNGRYM-KHPYFA---------------KAVMSAFERLVPQ 278
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
+ P +L P ++ D+ P KT + F++ + + + A+R A + D
Sbjct: 279 GEQVPFFLYFEVAPENI-DVNIHPTKTEIKFENEQAIWQILSAAVREAVGMFNDVPAIDF 337
Query: 363 DMLEDAELPL 372
D + ++P+
Sbjct: 338 DTVGKPDIPV 347
>gi|385873610|gb|AFI92130.1| DNA mismatch repair protein mutL [Pectobacterium sp. SCC3193]
Length = 661
Score = 130 bits (326), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 171/359 (47%), Gaps = 33/359 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHA-TSKITTL---DDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 238
RIAL V+ I + +L+ ++ + G I +FL V+
Sbjct: 177 RIALARFDVA---ITLHHNGKLMRQYRAAPDKSQYERRLGTICGATFLQHALAVSWQHDD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P + + QY Y+N R + +L+NH +
Sbjct: 234 LTIHGWVADPVGAKQLPDMQYCYVNQRMMRD----RLINH-----------AIRQAYQDQ 278
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
R Q PAY+L L PH + D+ P K V F V FI +A+ S + A
Sbjct: 279 LRDDQQ--PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMSVLQQASA 334
>gi|383757329|ref|YP_005436314.1| DNA mismatch repair protein MutL [Rubrivivax gelatinosus IL144]
gi|381377998|dbj|BAL94815.1| DNA mismatch repair protein MutL [Rubrivivax gelatinosus IL144]
Length = 629
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 165/346 (47%), Gaps = 33/346 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVV-DDGSG 62
I LP+ + + + +G V+ VV ELV N++DAGA V V + VV DDG G
Sbjct: 10 IRELPDELVSQIAAGEVVERPASVVRELVDNALDAGARAVVVRLAAGGVRSIVVEDDGCG 69
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + L L +RHA TSK+G L +++ + T GFRGEALA+I+ VS + I ++
Sbjct: 70 IPMEELPLALKRHA-TSKIGSLGELES---VRTMGFRGEALAAIASVSEMAITSRNADAA 125
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+G+R + + + + GTTV +LF++ P RRK+++S ++ H++ V
Sbjct: 126 HGWRVDARSGE-----LQPAARAQGTTVEVHELFFSTPARRKFLKSEATELAHAL-DAVR 179
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R AL P V F E + ++ L G E + + A G L ++
Sbjct: 180 RHALARPDVGFAVWH---EGRAVAQWRAAGTEQRLADVLGREFVAASRPLEAAAGPLRLT 236
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKRS 301
G P + S QY+++N RYV +L++H + A+++ L G +
Sbjct: 237 GRAGQPEAARSRTDLQYLFVNGRYVRD----RLVSHAIRAAYEDQ---------LHGSKQ 283
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
PAY L L L D+ P K V F+D V ++RA+
Sbjct: 284 -----PAYALFLEIEPELVDVNVHPTKIEVRFRDGRAVHQAVQRAV 324
>gi|315607435|ref|ZP_07882431.1| DNA mismatch repair protein MutL [Prevotella buccae ATCC 33574]
gi|315250867|gb|EFU30860.1| DNA mismatch repair protein MutL [Prevotella buccae ATCC 33574]
Length = 621
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 176/372 (47%), Gaps = 28/372 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV NSVDAGAT + V V ++V D+G G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGATVINVLVVDAGRTSIQVTDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK+ DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSDTDARLSFERH-ATSKIRQ---ADDLFALHTMGFRGEALASIAAVAQVELKTRQQSDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + + GS+ +LG + VG+ +LF+N P RRK+++S+ + L+++
Sbjct: 121 VGTQLTIAGSR--FLGQEPCSCPVGSNFKVENLFFNVPARRKFLKSNTTE-LNNIIAAFQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI LV+P +SF + S D L + + ++ FG L VN I
Sbjct: 178 RIVLVYPALSFT---LHSNDTELINLRAGNLRQRIVDVFGKRLNQDLLSVNVETTLCSIH 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + A QY ++N RY+ K P KA + +
Sbjct: 235 GFVGKPESARKKGAHQYFFVNGRYM-KHPYFA---------------KAVMSAFERLVPQ 278
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
+ P +L P ++ D+ P KT + F++ + + + A+R A + D
Sbjct: 279 GEQVPFFLYFEVAPENI-DVNIHPTKTEIKFENEQAIWQILSAAVREAVGMFNDVPAIDF 337
Query: 363 DMLEDAELPLES 374
D + ++P+ S
Sbjct: 338 DTVGKPDIPVFS 349
>gi|261345217|ref|ZP_05972861.1| DNA mismatch repair protein MutL [Providencia rustigianii DSM 4541]
gi|282566912|gb|EFB72447.1| DNA mismatch repair protein MutL [Providencia rustigianii DSM 4541]
Length = 651
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 171/374 (45%), Gaps = 52/374 (13%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDDGS 61
+I L + N + +G V+ VV+ELV NS+D+GAT++ + + ++V D+G
Sbjct: 2 SIQILSPQLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIERGGEKLIRVRDNGC 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI++D LVL RHA TSK+ A +DD I + GFRGEALASIS V+ L + +K +
Sbjct: 62 GINKDELVLALARHA-TSKI---ATLDDLEAIMSMGFRGEALASISSVARLTLTSKPAEQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++ +G + + + + GTTV DLFYN P RRK+M++ + H + + V
Sbjct: 118 TEAWQSYAEG-RDMQVTVKPAAHPNGTTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEIV 175
Query: 182 LRIALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFS 227
RIAL P V+ D++ E L C + F +
Sbjct: 176 RRIALSRPDVAINLTHNGKLVKQYRAAHDDIQQERRLGAICG---------TGFMQGALA 226
Query: 228 FLDEVNANDGALEISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCS 286
L E L I G++ SP S V + QY Y+N R + KL+NH
Sbjct: 227 LLWE----HSDLAIKGWVVSPSSSHHVASDIQYCYVNGRMMRD----KLINHAIR----- 273
Query: 287 DSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
+A G L + PAY+L L D+ P K V F V FI +A
Sbjct: 274 ---QAYEGHLDENQQ-----PAYVLYLTIDPKQVDVNVHPAKHEVRFHQARLVHDFIYQA 325
Query: 347 IRSAWMKKIAHDSF 360
+R+ + A D
Sbjct: 326 VRTVLLNTTAVDQL 339
>gi|345866843|ref|ZP_08818864.1| DNA mismatch repair MutL family protein [Bizionia argentinensis
JUB59]
gi|344048763|gb|EGV44366.1| DNA mismatch repair MutL family protein [Bizionia argentinensis
JUB59]
Length = 617
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 173/350 (49%), Gaps = 36/350 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DA A+ + + V V+V+D+GSG
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELIENAIDAKASVIKLLVKDAGKTLVQVIDNGSG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S ERHA TSK+ DD + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSITDARFSFERHA-TSKI---KTADDLFKLNTKGFRGEALASIAAIAHVELKTKQEHED 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + +++GS+ E++ V GT++ ++LF+N P RR +++S+ ++ H +
Sbjct: 121 VGTQIIIEGSEV------KEQEVVVTPTGTSIAVKNLFFNIPARRNFLKSNTVELRHIID 174
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ R+AL HP + F SE +S+ +++ FG + L VN
Sbjct: 175 EF-HRVALAHPTIQFSMYHNGSES---FQLPASNFRQRIVNIFGAKTNEKLVPVNETTEV 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L +SG++ P + + Q+ ++N+R++ ++ +N ++FD G LK
Sbjct: 231 LTVSGFVGKPEYAKKTRGEQFFFVNNRFIKSAYLNHAIN---SAFD---------GLLKD 278
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
S Y L+L D+ P KT + F D + A + A++
Sbjct: 279 GTHAS-----YFLDLTVNPQTIDINIHPTKTEIKFDDEHTLYAILRAAVK 323
>gi|303232202|ref|ZP_07318905.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-049-V-Sch6]
gi|302513308|gb|EFL55347.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-049-V-Sch6]
Length = 652
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 181/356 (50%), Gaps = 35/356 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGV-CNCYVKVVDD 59
M TI+ L E N + +G V+ VV+EL+ NS+DAGAT + V +G + Y+++ D+
Sbjct: 1 MATIHVLDETTINKIAAGEVVERPASVVKELIENSIDAGATSIEVEIGEGGSAYMRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + L RH ATSK+ ++ D+ D I + GFRGEALASI+ VS + T+
Sbjct: 61 GKGMTEEDARLAVLRH-ATSKIQNVEDLFD---IASLGFRGEALASIASVSHFVLTTRTV 116
Query: 120 GRPNGYRKVMKG---SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+ G R ++ G + C+ G GTT+ ++LF+N P RRK++++ +
Sbjct: 117 DQELGTRILIDGGTFTDCIPYGAAP-----GTTIEVKELFFNTPARRKFLKTE-RTESSK 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDEL-LCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
++ V ++AL +P ++FK + +D + + T SSS + + +G + + + +
Sbjct: 171 IQDIVGKLALSNPHIAFK---LTIDDRVAIITPGSSSIQDTVAALYGYKTKNDIFPIAYE 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ I G +S P S + +Q + +N+R + I K ++ + + +G+
Sbjct: 228 SEHIYIEGVVSKPTLLKSTRIWQTIIVNNRVISDKTILKAID------NAYHALLPKSGY 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P LL++ P S+ D+ P K+ V F+D + + + AI +A
Sbjct: 282 -----------PLVLLHITVPASMVDINVHPRKSEVKFEDDKIIFKAVYHAILNAL 326
>gi|119946846|ref|YP_944526.1| DNA mismatch repair protein MutL [Psychromonas ingrahamii 37]
gi|171769133|sp|A1SZL2.1|MUTL_PSYIN RecName: Full=DNA mismatch repair protein MutL
gi|119865450|gb|ABM04927.1| DNA mismatch repair protein MutL [Psychromonas ingrahamii 37]
Length = 628
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 166/356 (46%), Gaps = 53/356 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVDDGS 61
I L + N + +G V+ VV+EL+ NS+DAGATK+ + + G C ++V D+G+
Sbjct: 3 IQILAARLANQIAAGEVVERPASVVKELIENSLDAGATKIEIDIEKGGAKC-IRVKDNGA 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+ ++ L L RHA TSK+ HL DD I + GFRGEALAS+S VS L +K +
Sbjct: 62 GVCQEQLTLALSRHA-TSKISHL---DDLEAIVSLGFRGEALASVSSVSRLTFTSKPADQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++ + +G + + + I GTTV DLF+N P RR+++++ + H + + +
Sbjct: 118 EQAWQAIAEG-RDMQVTIQPAAHPQGTTVEVLDLFFNTPARRRFLKTEKTEFQH-IDELI 175
Query: 182 LRIALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFS 227
RIAL +++F + E L CS S + S+ ++
Sbjct: 176 RRIALSRFEITFVLKHNHKIVHQYRATQTQSQQEKRLASICSES----FVSSALYFQN-- 229
Query: 228 FLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
+D AL+ISG++S + S QY YIN R + KL+NH
Sbjct: 230 -------SDNALKISGWVSDKLSARSSNDVQYCYINGRVIRD----KLINHAIKQVYAY- 277
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 343
+GK PAY++ + C D+ P K V F V FI
Sbjct: 278 ------SLPQGK------FPAYVIYIECDPDQVDVNVHPSKHEVRFHQARWVHDFI 321
>gi|188535087|ref|YP_001908884.1| DNA mismatch repair protein [Erwinia tasmaniensis Et1/99]
gi|238689721|sp|B2VCU8.1|MUTL_ERWT9 RecName: Full=DNA mismatch repair protein MutL
gi|188030129|emb|CAO98015.1| DNA mismatch repair protein [Erwinia tasmaniensis Et1/99]
Length = 611
Score = 129 bits (325), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 174/383 (45%), Gaps = 53/383 (13%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G
Sbjct: 2 AIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNGC 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI++D L + RHA TSK+ +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 62 GIAKDELAMALARHA-TSKI---TSLDDLEAIISLGFRGEALASISSVSRLTLTSRTEAQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + +
Sbjct: 118 TEAWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEII 175
Query: 182 LRIALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFS 227
RIALV V+ D + E L C G S
Sbjct: 176 RRIALVRFDVAISLTHNGKLVRQYRAVSDDGQRERRLGAIC-------------GTAFLS 222
Query: 228 FLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
+++ G L + G+++ P S ++ QY Y+N R + +L+NH A D
Sbjct: 223 HALKIDWQHGELSLHGWVADPSGSKALSELQYCYVNGRMMRD----RLINH-AIRQAYED 277
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
G R + PAY+L L PH + D+ P K V F V FI +
Sbjct: 278 KL--------GDRHQ----PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 324
Query: 347 IRSAWMKKIAHDSFDVDMLEDAE 369
+ S + A ++ + AE
Sbjct: 325 VVSVLQESGAETLPEIATAQPAE 347
>gi|410458688|ref|ZP_11312445.1| DNA mismatch repair protein [Bacillus azotoformans LMG 9581]
gi|409931038|gb|EKN68026.1| DNA mismatch repair protein [Bacillus azotoformans LMG 9581]
Length = 624
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 192/410 (46%), Gaps = 38/410 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I +L + N + +G V+ VV+ELV N++DAG+T++ ++V ++++D+
Sbjct: 1 MGRIKQLDHQLSNKIAAGEVIERPASVVKELVENAIDAGSTRIEIHVKEAGLSEIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +L ERH ATSK + D +D I T GFRGEAL SI+ VS+LE+ +
Sbjct: 61 GDGIEPEDCLLAFERH-ATSK---IKDENDLFRIRTLGFRGEALPSIASVSVLEMKSSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P Y K+ G ++ + GT ++ +LF+N P R KYM++ + L ++
Sbjct: 117 EGPGTYIKLKGGHIEIHESTASRK---GTEIIVSNLFFNTPARLKYMKTVHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ RIAL HP++S + + + +L T + L +L S +G+ + +
Sbjct: 173 YLNRIALAHPEISLQL--THNGNRILFTSGNGDVLQVLASIYGMSIAKQMLPLKLESIDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E+ GYI+ P + + + + IN R++ + K + + + L
Sbjct: 231 EVKGYIARPEVTRASRNYISTIINGRFIKNYALAKAIQ------------EGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
R P LLN+ L D+ P K V + I I++A+ K+ +
Sbjct: 279 R-----YPIVLLNIEMDPLLVDVNVHPAKLEVRLSKEHELCDLITEGIKTAFRKQ----T 329
Query: 360 FDVDMLEDAELP------LESSRFQSHQSSTHLHSSPLKNLAKQRDHMFH 403
D+L+ + P ++ F+ T + PL+ + + + + FH
Sbjct: 330 LIPDVLKPKKEPKRPVSEQQTISFEHRFPDTLIMERPLQEVIETKANPFH 379
>gi|317504763|ref|ZP_07962723.1| DNA mismatch repair protein MutL [Prevotella salivae DSM 15606]
gi|315664145|gb|EFV03852.1| DNA mismatch repair protein MutL [Prevotella salivae DSM 15606]
Length = 610
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 171/370 (46%), Gaps = 28/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV NSVDAGA + + V + V DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGAKNIQIQVIDAGKTTILVTDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK + DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSATDARLSFERH-ATSK---IRKADDLFALHTMGFRGEALASIAAVAQIELKTRQESDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + GS+ ++G + VG++ +LFYN P RRK+++S+ + L+++
Sbjct: 121 VGTLLSISGSR--FVGQEPCSCAVGSSFSVNNLFYNVPARRKFLKSNSTE-LNNIITAFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RIALV+P ++F ++S L + +I FG L V + I+
Sbjct: 178 RIALVYPDIAFT---LQSNGTELFNLKAGVLRQRIIDIFGKRLNQELLSVKVDTTMCRIN 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GY+ P + A QY ++N RY+ H N KA +
Sbjct: 235 GYVGKPESARKKGAHQYFFVNGRYMK----HPYFN------------KAVMAAFERLVPT 278
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
+ P +L P + D+ P KT + F++ P+ + A++ A S D
Sbjct: 279 GEQVPYFLYFEVAPKDI-DVNIHPTKTEIKFENEVPIWQILSAAVKEAVSMFNDIPSIDF 337
Query: 363 DMLEDAELPL 372
D E+P+
Sbjct: 338 DTEGRPEIPV 347
>gi|227554584|ref|ZP_03984631.1| DNA mismatch repair protein [Enterococcus faecalis HH22]
gi|227176261|gb|EEI57233.1| DNA mismatch repair protein [Enterococcus faecalis HH22]
Length = 710
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 171/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQKLSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|399156290|ref|ZP_10756357.1| DNA mismatch repair protein [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 652
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 197/409 (48%), Gaps = 39/409 (9%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
++ LPE++ N + +G V+ VV+EL+ N++DAGAT++ V + + ++D+G
Sbjct: 10 SVRILPESLINKIAAGEVVERPASVVKELLENAIDAGATEIQVSIKNGGKDLISILDNGC 69
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G++ L ERH ATSK + + +D I T GFRGEALASI+ +S EI+T
Sbjct: 70 GMNESDAQLAVERH-ATSK---IINEEDLFRIRTLGFRGEALASIAAISHFEILTCNDET 125
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
R +KG +G K GT V LFYN P R K+++++ ++ H +++ +
Sbjct: 126 QGATRIFIKGGYLEQVGKIGFPK--GTKVTVERLFYNTPARLKFLKTTATELQH-IQQHL 182
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFS-FLDEVNANDGALE 240
++ +L +P + F+ + +LL S L I E+F L V + L+
Sbjct: 183 VQKSLAYPHIHFR---LTHNRQLLLNLSGGQALETRIHQLYGEEFKEILMPVKHKETYLQ 239
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
SG+IS P + + +QY+++N R V K P +NH D + G KG+
Sbjct: 240 FSGFISFPSKPRTSRRWQYIFVNERNV-KSPS---INH-----GIYDGYGTFLG--KGQH 288
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF----IERAIRSAWMKKI- 355
P + LNLR + D+ P KT + F++ + V I RA++ ++
Sbjct: 289 ------PVFFLNLRIDPTEIDVNVHPAKTEIRFRNNQLVHTILVDQISRALKEGASRRFF 342
Query: 356 ----AHDSFD-VDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRD 399
+H ++ ELP+E SS + S+ K +++ RD
Sbjct: 343 GREHSHSQMSRTELSGQIELPMEDPLTLGSPSSGMMFSTNKKRISEVRD 391
>gi|256828082|ref|YP_003156810.1| DNA mismatch repair protein MutL [Desulfomicrobium baculatum DSM
4028]
gi|256577258|gb|ACU88394.1| DNA mismatch repair protein MutL [Desulfomicrobium baculatum DSM
4028]
Length = 610
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 178/387 (45%), Gaps = 46/387 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVDDGS 61
I LP ++N + +G V+ + V++ELV N++DAGAT++ + + G +C ++V D+GS
Sbjct: 7 IRLLPPELQNQIAAGEVVERPSSVLKELVENALDAGATRIRIQIRDGGQSC-IRVSDNGS 65
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI D L L RHA TSKL +L+D+ I +FGFRGEAL SI+ VS I + H
Sbjct: 66 GIFEDQLELAVTRHA-TSKLQNLSDLQH---INSFGFRGEALPSIASVSRFRIASARHDG 121
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC- 180
G +V+ G L D GT V DLF N P R K++ KK +KC
Sbjct: 122 DGGVLEVLHGR---ILRQDKTAMPKGTDVEINDLFSNVPARLKFL----KKPGTETRKCA 174
Query: 181 --VLRIALVHPKVSFKFIDME-SEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
V RIAL +P V F+ ++ + + L + LA + +E L V+ DG
Sbjct: 175 ELVARIALANPHVDFELVNADRTVHRFLAAQDLTQRLAAIWPQEVVES---LHGVDFKDG 231
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
L + G + P + VY+N+R V I S +A G +
Sbjct: 232 ELSVHGLVGDPAMAQGRPDRILVYVNARPVQDKTI------------LSAIREAYRGRIL 279
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
GK P ++ L P D+ P KT V F+D + I RA+ + + H
Sbjct: 280 GKE-----YPQAVIFLEIPPDEVDVNVHPAKTEVRFQDDGAIFRIIRRAVLQTLERNV-H 333
Query: 358 DSFDVDMLED-------AELPLESSRF 377
+ ++ + A LP+ RF
Sbjct: 334 QTHAIEHAQPLSVSQVHASLPVMEPRF 360
>gi|337280249|ref|YP_004619721.1| DNA mismatch repair protein mutL [Ramlibacter tataouinensis TTB310]
gi|334731326|gb|AEG93702.1| Candidate DNA mismatch repair protein mutL [Ramlibacter
tataouinensis TTB310]
Length = 597
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 164/357 (45%), Gaps = 49/357 (13%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVV-DDGSG 62
I LP+ + + + +G V+ VV ELV N++DAGAT+V V + + V DDG G
Sbjct: 13 IRELPDELISQIAAGEVIERPASVVRELVDNALDAGATQVTVRLSAGGVRLICVEDDGCG 72
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK----- 117
I+R+ L + +RHA TSK+ LAD++ +GT GFRGEALA+I+ V+ L ++++
Sbjct: 73 IAREELPVALKRHA-TSKIASLADLES---VGTMGFRGEALAAIASVAELSLLSRTAEAA 128
Query: 118 -AH---GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
AH GR R V +G +GTTV ++LF++ P RRK++++ +
Sbjct: 129 SAHLLDGRSGELRPVARG--------------IGTTVEVKELFFSTPARRKFLKTDATEF 174
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 233
H V + V R AL P V F E +L + G + V
Sbjct: 175 AHCV-EAVRRHALARPDVGFAIWH---EGKLAEQWRPAGQEQRWADVLGRDFIEHSVPVA 230
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
G + ++G P + S Q+ Y+N RYV K+L H A S A
Sbjct: 231 WRAGPVRLAGRAGIPDAARSRADQQFAYVNGRYVRD----KVLQHAARS--------AYE 278
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
L G+R P Y+L L D+ P K V F+D V + A+ A
Sbjct: 279 DVLHGQRQ-----PVYVLQLEISPERVDVNVHPTKIEVRFRDGREVHQAVRHALEQA 330
Score = 45.4 bits (106), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 17/189 (8%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
+ L Q+ +I L ++D HAA ERI E L+ ++ +G+ +A Q L++P
Sbjct: 409 RALAQLHGIYILAQNRQGLVIVDMHAAHERIVYERLKAQL---DGQQIA----SQPLLIP 461
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1287
+E +HT G L + + + AVP +
Sbjct: 462 AT---FAATPSEIATAEACTAALHTLG-------LEITPFSARTLAVRAVPTSLAQGDAA 511
Query: 1288 VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1347
L +LA D S+ + +L + AC GA+ L E ++ +++ T
Sbjct: 512 DLARSVLAELAQHDASTVVQRARNELLATMACHGAVRANRQLTLEEMNALLRQMEATERS 571
Query: 1348 FQCAHGRPT 1356
QC HGRPT
Sbjct: 572 DQCNHGRPT 580
>gi|433463732|ref|ZP_20421274.1| DNA mismatch repair protein [Halobacillus sp. BAB-2008]
gi|432187174|gb|ELK44501.1| DNA mismatch repair protein [Halobacillus sp. BAB-2008]
Length = 618
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 173/355 (48%), Gaps = 28/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I +P+ + N + +G V+ VV+EL+ NS+DAGA+ + V + +++ DD
Sbjct: 1 MARIRLMPDHLANKIAAGEVVERPASVVKELIENSIDAGASWIKVELLEAGLERIRITDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSG+ + RH ATSK + D +D + T GFRGEALASI+ VS L + T
Sbjct: 61 GSGMEEEDCERAFLRH-ATSK---IKDENDLFHVRTLGFRGEALASIAAVSRLTVQTST- 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G + ++G K L D RK GT + +LFYN P R KYM++ ++ H V
Sbjct: 116 GDAAGTKLTLEGGKLLSKTKSDARK--GTDITVDELFYNTPARLKYMKTIHTELGH-VTD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL HP+V + + + +E ++ T L ++ + +G+ + + A +
Sbjct: 173 ILNRVALAHPEV--QILCVHNEKQIFKTNGRGDLLQVVANIYGMNVARKMVPIEAENADF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+I+G+I+ P + + + IN R++ P++K + + + L
Sbjct: 231 KITGFIAKPEVYRASRNYMSTIINGRFIRSIPLNKAV------------LQGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
+S P +LN+ L D+ P K V F + + +E IR A+ K+
Sbjct: 279 KS-----PIVVLNIDMDPILVDVNVHPSKLEVRFSKEKELFGLLEDTIRQAFRKQ 328
>gi|227363259|ref|ZP_03847391.1| DNA mismatch repair protein [Lactobacillus reuteri MM2-3]
gi|227071715|gb|EEI10006.1| DNA mismatch repair protein [Lactobacillus reuteri MM2-3]
gi|290558719|gb|ADD37853.1| DNA mismatch repair protein HexB [Lactobacillus reuteri]
Length = 668
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 181/374 (48%), Gaps = 35/374 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L + N + +G V+ +V+ELV NS+DA + +V + V V+V+DD
Sbjct: 1 MGKIHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + + L RH ATSK+ D+ + T GFRGEAL SI+ V+ + + T
Sbjct: 61 GDGIAAEDISLAFHRH-ATSKINSRHDL---FKVQTMGFRGEALPSIASVADVTLTTAQA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G+ G ++G K L + R+ GT + DLF+N P R KY++ SP+ L +
Sbjct: 117 GQEEGTMIHLRGGKELVVKPAGARQ--GTDIKVTDLFFNTPARLKYLK-SPQTELTRITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL +P V+F F + EL + +++ ++ + +G++ + E++ D
Sbjct: 174 IINRLALANPAVAFSF--THNGRELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++SG++S P + + + + + IN RY+ +++ ++G
Sbjct: 232 KVSGFVSLPELTRASRQYITITINHRYIR-------------------NFELTKAIIQGY 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++N+ L D+ P K V + ++ I IR ++IA
Sbjct: 273 ESKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLIKLIAETIR----QRIAV 328
Query: 358 DSFDVDMLEDAELP 371
++ D+ D +P
Sbjct: 329 ENLIPDVDADQFIP 342
>gi|261367033|ref|ZP_05979916.1| DNA mismatch repair protein MutL [Subdoligranulum variabile DSM
15176]
gi|282571151|gb|EFB76686.1| DNA mismatch repair domain protein [Subdoligranulum variabile DSM
15176]
Length = 687
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 174/354 (49%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + +G V+ V +EL+ N++DAGAT++ + G+ +++V
Sbjct: 1 MAEIRVLDKHTAELIAAGEVVERPASVAKELLENAIDAGATQITLSATRGGIAQ--LQIV 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+GSGI + + RHA TSK+ A +D I T GFRGEALASI+ V+ +E++T+
Sbjct: 59 DNGSGIEAEYIDKAFIRHA-TSKI---ASAEDLNHIHTLGFRGEALASIASVAKVEVLTR 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
+ Y + + G + + VGTT+ +LFYN P R K+++ + + V
Sbjct: 115 TEQ--DEYACCYRIAGGEPQGTEPGARPVGTTITVNELFYNTPARMKFLKKDASEGTY-V 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ VL AL HP++SF+FI E + + + T + + + G E L V+ +G
Sbjct: 172 AETVLHAALSHPEISFRFIR-EGKQQFM-TPGDGELRSAVYAVMGREFARDLLPVDGGNG 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
I+G I+ P + + Q+ ++N RYV K +AA +++K ++
Sbjct: 230 VYRITGLITPPRACRASRGTQHFFVNGRYV------KNRTMMAA---LENAYKGT--MMQ 278
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
GK P +L L P L D+ P KT + F V + RA+R+A
Sbjct: 279 GK------FPGAVLMLEMPADLVDVNVHPAKTEIRFARESDVFDAVYRAVRTAL 326
Score = 48.1 bits (113), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 47/229 (20%)
Query: 1158 SINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAY 1217
++ ++ +++ +V K +I G L +ID+HAA ERI E+L K
Sbjct: 492 TMTPPSVQPLRLVGEVFKTYIITEREGELCLIDKHAAHERILFEKL--------AKDYGN 543
Query: 1218 LDAEQELVLPEIGYQ------LLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV 1271
+ A+ LV ++ LLQN +E + D G + G +
Sbjct: 544 VPAQMLLVPVQVNLTAAEKQALLQN-SEMLNDAGL--EVEDFGG--------------ST 586
Query: 1272 ITLLAVPCIFGVNLSDVDLLEFLQQLAD--TDGSSTTPPSVLR-----VLNSKACRGAIM 1324
+ + AVP V + DV+ + + +LA DGS LR VL+S ACR AI
Sbjct: 587 VMVRAVPA--DVQVDDVE--DMVVELASRFVDGSR----DALREKTEWVLHSIACRAAIK 638
Query: 1325 FGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1373
GD +E ++ + + S+ C HGRP + + E L KQ +L
Sbjct: 639 AGDRTSDAEMLVLAQNILDGSIPPFCPHGRPCVLKITRKE-LEKQFGRL 686
>gi|336477854|ref|YP_004616995.1| DNA mismatch repair protein MutL [Methanosalsum zhilinae DSM 4017]
gi|335931235|gb|AEH61776.1| DNA mismatch repair protein MutL [Methanosalsum zhilinae DSM 4017]
Length = 588
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 168/357 (47%), Gaps = 39/357 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ L EA N + +G V+ VV+EL+ N++DAG++++ V V G + V D+G G
Sbjct: 8 IHILDEATVNKIAAGEVIERPASVVKELIDNAIDAGSSQISVEVEGAGAGKIMVSDNGCG 67
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L +HA TSK+ ++DD + T GFRGEAL+SI+ V+ +E+IT+
Sbjct: 68 MSEKDASLAFMKHA-TSKI---KEIDDLNNLSTLGFRGEALSSIAAVAKVEMITRQKNSV 123
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSR----DLFYNQPVRRKYMQSSPKKVLHSVK 178
+G + V+ + DE VG V SR DLFYN P RRKY++S ++ H +
Sbjct: 124 SGTKLVVTNGEI------DEVSQVGAAVGSRICVKDLFYNTPARRKYLKSRRTEISHII- 176
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
V + AL +P +SF F+ E + +L + S + +I FG + L + A
Sbjct: 177 DVVTKQALANPGISF-FLKNEGK-TILKAPKAKSGMDTIIHLFGGDIAKSLIPIEAKSNG 234
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SGYIS P + Q+++IN R C S +N G
Sbjct: 235 MKLSGYISRPELTKGNNDHQFIFINGR-------------------CVSSASISNAIRLG 275
Query: 299 KRSK--SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+K P + L D P K+ V + V+ F+ A+ S +
Sbjct: 276 YYTKIPKGRYPVAFIKLDADPKNIDFNVHPTKSKVRLSNENEVIDFVSMAVESTLSR 332
>gi|344213218|ref|YP_004797538.1| DNA mismatch repair protein MutL [Haloarcula hispanica ATCC 33960]
gi|343784573|gb|AEM58550.1| DNA mismatch repair protein MutL [Haloarcula hispanica ATCC 33960]
Length = 716
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 164/373 (43%), Gaps = 47/373 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + + +G V+ VV+ELV N++DA AT+V V V ++V DD
Sbjct: 1 MTDIQRLDDRTVERIAAGEVVERPASVVKELVENAIDADATRVEVVVEAGGTDGIRVTDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R+ + E+H TSK+ +AD++ G+GT GFRGEAL +I VS L I T+
Sbjct: 61 GVGMDREAVETAVEKHT-TSKIRDIADLE--GGVGTLGFRGEALHAIGAVSRLTIRTRPR 117
Query: 120 GRPNGYRKVMKGSKCLYL---GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G G V++G + G + GTT+ DLFYN P RRKY++ + H
Sbjct: 118 GGDVGTELVLEGGDVTSVSPAGCPE-----GTTMAVEDLFYNVPARRKYLKQESTEFAH- 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFL------D 230
V V AL +P V+ + E T ++S +G E +
Sbjct: 172 VNTVVASYALANPDVAVSL--THGDRETFSTTGQGDLRETVMSVYGREVAESMISVGAGS 229
Query: 231 EVNAN--------DGALE-ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAA 281
E NA+ DG L+ + G +S P + + + + Y+N RYV G + +
Sbjct: 230 EANADGDESDSFPDGPLDGVHGLVSHPETNRAGREYLSTYVNGRYVRAGTVRDAVVDAYG 289
Query: 282 SFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLA 341
+ D + P +L L P D+ P K V F D E V
Sbjct: 290 TQIAPDRY-----------------PFAVLFLDVPAGDVDVNVHPRKMEVRFADDEGVRE 332
Query: 342 FIERAIRSAWMKK 354
+ A+ A +++
Sbjct: 333 QVRTAVEDALLRE 345
>gi|322831154|ref|YP_004211181.1| DNA mismatch repair protein MutL [Rahnella sp. Y9602]
gi|321166355|gb|ADW72054.1| DNA mismatch repair protein MutL [Rahnella sp. Y9602]
Length = 639
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 186/384 (48%), Gaps = 45/384 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IKVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RH ATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARH-ATSKITCL---DDLEAILSLGFRGEALASISSVSRLILTSRTAEQN 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I G+TV DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTIKPAAHPQGSTVEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSS-------SSPLALLISSFGIEDFSFLDEVNAN 235
RIAL VS +++ +L+ + S LA + S +E EV +
Sbjct: 177 RIALARFDVS---VNLSHNGKLIRQYRAVKDRSQFSRRLASICSPAFVEHAL---EVEWS 230
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
G L I G+++ P S S+ QY Y+N+R + +L+NH A D K +
Sbjct: 231 HGDLAIHGWVADPAGSRSLTDMQYCYVNNRMMKD----RLINH-AIRQAYQDQLKDDQQ- 284
Query: 296 LKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
PAY+L L PH + D+ P K V F V FI +A+ S +
Sbjct: 285 -----------PAYVLYLDVDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQAVMSVLQQA 332
Query: 355 IAHDSFDVDMLEDAELPLESSRFQ 378
A +L++ +L ++ R+Q
Sbjct: 333 GA------PVLDEPQLQEDTPRWQ 350
>gi|429204953|ref|ZP_19196234.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
gi|428146815|gb|EKW99050.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
Length = 655
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 169/350 (48%), Gaps = 32/350 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I+ L + + + +G V+ VV+ELV N++DA AT + + V ++V+D+
Sbjct: 1 MGKIHELAPNLADQIAAGEVVERPASVVKELVENAIDAHATTIDIVVEEAGLKSIQVMDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI D + L +RH ATSK ++ +D + T GFRGEAL SI+ ++ +++ T
Sbjct: 61 GDGIPADEVKLAFKRH-ATSK---ISAREDLFKVQTLGFRGEALPSIASIADVQLTTATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+P G +KG L G+ R GTT+ +LFYN P R KY+ S + L +V
Sbjct: 117 DQP-GTAIHLKGGTVLEFGVSASRP--GTTITVTELFYNTPARLKYLGSLATE-LAAVSD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP+++F + + +LL T + + ++ + +G++ + + D
Sbjct: 173 IVNRLALGHPEIAFSLTN--NGHQLLQTAGNGNLQQVIGAIYGVQSARQMLAITGEDHDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+++G++S P + + + + + IN RY+ +++ +KG
Sbjct: 231 KVTGFVSLPKLTRAARKYISLLINGRYI-------------------KNFQLTKALIKGY 271
Query: 300 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
SK P +LN+ L D+ P K V E + IE I
Sbjct: 272 GSKLMIGRYPIAVLNIELNPLLVDVNVHPTKQEVRISKEEQLTHLIETTI 321
>gi|383188399|ref|YP_005198527.1| DNA mismatch repair protein MutL [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371586657|gb|AEX50387.1| DNA mismatch repair protein MutL [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 638
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 186/384 (48%), Gaps = 45/384 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IKVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RH ATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARH-ATSKITCL---DDLEAILSLGFRGEALASISSVSRLILTSRTAEQN 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + G+TV DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMTVTVKPAAHPQGSTVEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSS-------SSPLALLISSFGIEDFSFLDEVNAN 235
RIAL VS +++ +L+ + S LA + S +E EV +
Sbjct: 177 RIALARFDVS---VNLSHNGKLIRQYRAVKDPSQFSRRLASICSPTFVEHAL---EVEWS 230
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
G L I G+++ P S S+ QY Y+N+R + +L+NH A D K +
Sbjct: 231 HGDLAIRGWVADPAGSRSLTEMQYCYVNNRMMKD----RLINH-AIRQAYQDQLKDDQQ- 284
Query: 296 LKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
PAY+L L PH + D+ P K V F V FI +A+ S +
Sbjct: 285 -----------PAYVLYLDVDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQAVMSVLQQA 332
Query: 355 IAHDSFDVDMLEDAELPLESSRFQ 378
A +L++ +L ++ R+Q
Sbjct: 333 GA------PVLDEPQLQEDTPRWQ 350
>gi|358448119|ref|ZP_09158624.1| DNA mismatch repair protein [Marinobacter manganoxydans MnI7-9]
gi|357227547|gb|EHJ06007.1| DNA mismatch repair protein [Marinobacter manganoxydans MnI7-9]
Length = 636
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 168/364 (46%), Gaps = 29/364 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ VV+ELV N++DAGA +V V V ++V DD
Sbjct: 1 MPPIRLLSPRLANQIAAGEVVERPASVVKELVENALDAGANRVDVEVEQGGVKLIRVRDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI D L L RHA TSK+ A +DD + + GFRGEALASIS VS L + ++
Sbjct: 61 GSGIEEDDLPLALSRHA-TSKI---ASLDDLEAVASLGFRGEALASISSVSRLTLTSRTE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ R ++G + + I VGTTV RDLF+N P RRK++++ + H V++
Sbjct: 117 SQEAASRVEVEGRE-MDARISPAAHPVGTTVEVRDLFFNTPARRKFLRTEKTEFNH-VEE 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNAND 236
CV R AL F + + L S+ I S + F+D ++A
Sbjct: 175 CVRRQALSRFDAGFTLRHNQRVVQSLRPAESALDRERRIGSLCGQ--QFIDNAVVIDAEA 232
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
L + G+++ P S S QY ++N R + +L+ H +A L
Sbjct: 233 TGLRLWGWVALPTFSRSQADLQYFFVNGRVIRD----RLVAHAVR--------QAYRDVL 280
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
R PA++L L + D+ P K V F+D V FI R + A
Sbjct: 281 YNNRH-----PAFVLYLEVDPATVDVNVHPTKHEVRFRDGRLVHDFIFRTLHKALADVRP 335
Query: 357 HDSF 360
D F
Sbjct: 336 DDHF 339
>gi|319900075|ref|YP_004159803.1| DNA mismatch repair protein MutL [Bacteroides helcogenes P 36-108]
gi|319415106|gb|ADV42217.1| DNA mismatch repair protein MutL [Bacteroides helcogenes P 36-108]
Length = 644
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 186/384 (48%), Gaps = 47/384 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A ++ V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQEIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIHEAADL---FALRTMGFRGEALASIAAVAEVELKTRPASEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRLMIAGSKV------ESQEAVSCPKGSNFSVKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP+V+F + S D L ++S FG + L V +
Sbjct: 174 NEFERIALVHPEVAFY---LYSNDTELFNLPVMPLRQRIMSVFGKKLNQQLLAVEVDTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 231 VKVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + A++ +
Sbjct: 274 -----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKETLGR 328
Query: 354 KIAHDSFDVDMLEDAELP-LESSR 376
A + D D + ++P E +R
Sbjct: 329 FNAVPTIDFDTEDMPDIPAFEQAR 352
>gi|409404613|ref|ZP_11253092.1| DNA mismatch repair protein [Herbaspirillum sp. GW103]
gi|386436132|gb|EIJ48955.1| DNA mismatch repair protein [Herbaspirillum sp. GW103]
Length = 642
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 173/360 (48%), Gaps = 42/360 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP+ + + + +G V+ + VV+EL+ N++DAG+T++ V + + + D+G G
Sbjct: 21 IQALPDQLISQIAAGEVIERPSAVVKELLENALDAGSTQITVRLEQGGVKRIAITDNGRG 80
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + L L RHA TSK+ L D+++ + T GFRGEALASI+ V+ L + ++ P
Sbjct: 81 IPPEQLPLALARHA-TSKIASLTDLEN---VSTLGFRGEALASIASVAQLTVTSRTADAP 136
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+ + + GS+ + + GTT+ +DL++N P RRK+++S + H + V
Sbjct: 137 HAWE--ITGSQ--FGTVAPASGAQGTTIDVQDLYFNTPARRKFLKSEQTEYGHCA-EVVR 191
Query: 183 RIALVHPKVSF------KFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
RIAL P VSF K +D + E + +L F LDE +
Sbjct: 192 RIALARPDVSFSLSHNGKTVDHWNVGEFAKRSAH-----ILGDEFANARLP-LDE---SA 242
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
G L + G++ P S + QY Y+N R+V KLL H + A L
Sbjct: 243 GPLRLHGFVGLPTASKARADGQYFYVNGRFVRD----KLLTHAVRA--------AYQDVL 290
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
G R PAY L+L +L D+ P K V F+D V F+ A+ A + A
Sbjct: 291 HGDR-----YPAYALSLTLDPALVDVNVHPSKIEVRFRDSRAVHQFVFHAVSRALAQTSA 345
>gi|398814313|ref|ZP_10572994.1| DNA mismatch repair protein MutL [Brevibacillus sp. BC25]
gi|398036582|gb|EJL29791.1| DNA mismatch repair protein MutL [Brevibacillus sp. BC25]
Length = 676
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 168/352 (47%), Gaps = 33/352 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MGTI L E + N + +G V+ VV+ELV N++DA AT + ++V +++VD+
Sbjct: 1 MGTIQVLDEHLANMIAAGEVVERPASVVKELVENAIDASATTIEIHVEEGGLEMIRIVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R+ L ERH ATSK+ + D+ I T GFRGEAL SI+ VS +E+ +
Sbjct: 61 GKGMDREDCQLAFERH-ATSKISNARDL---FRIRTLGFRGEALPSIAAVSRMELTSSTS 116
Query: 120 GRPNGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G +++G + LG I D+ GT V R LF+N P R KYM+S +V H +
Sbjct: 117 SSEVGTHLLLEGGQ---LGTISDKAAVKGTEVCVRSLFFNTPARLKYMKSIATEVGH-IS 172
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
V R+AL HP +SF + LL T L ++ + +G++ L +
Sbjct: 173 DYVNRLALTHPAISFLLT--HNSKTLLQTSGDGKLLHVMAAIYGVQVAKLLLPIAGETLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ SG++S + + +++ +N RYV S+ NN ++G
Sbjct: 231 YKWSGFLSKTEVTRANRSYLSTLVNGRYV-------------------RSYSINNAIMRG 271
Query: 299 KRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+ P L + SL D+ P K F + + + IE++++
Sbjct: 272 YHTLLPIGRYPIVALQIEMDPSLVDVNVHPAKLEARFSKEDELCSAIEQSVK 323
>gi|238784776|ref|ZP_04628778.1| DNA mismatch repair protein mutL [Yersinia bercovieri ATCC 43970]
gi|238714289|gb|EEQ06299.1| DNA mismatch repair protein mutL [Yersinia bercovieri ATCC 43970]
Length = 633
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 192/381 (50%), Gaps = 37/381 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGVKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I+++ L L RH ATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 INKEDLALALARH-ATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQN 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLA----LLISSFGIEDFSFLDEVNANDGA 238
RIAL V+ I++ +L+ +++ + L S G+ V+ G
Sbjct: 177 RIALARFDVA---INLSHNGKLMRQYRAATDPSHHERRLASICGLAFLQHALAVSWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S ++ QY Y+N+R + +L+NH +A LK
Sbjct: 234 LTIRGWVADPAASRTLGEMQYCYVNNRMMRD----RLINHAIR--------QAYQDLLKD 281
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 282 DQQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQTAT 334
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+V+ +D E +E+ R+Q
Sbjct: 335 PILNVN--DDGE-EIEAPRWQ 352
>gi|212218528|ref|YP_002305315.1| DNA mismatch repair protein [Coxiella burnetii CbuK_Q154]
gi|212012790|gb|ACJ20170.1| DNA mismatch repair protein [Coxiella burnetii CbuK_Q154]
Length = 575
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 173/370 (46%), Gaps = 45/370 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + N + +G V+ VV+EL+ NS+DA A+ + V + +++ DD
Sbjct: 1 MMYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + LVL ERHA TSK+ A +DD I T GFRGEAL+SIS VS L + ++
Sbjct: 61 GDGIHPEDLVLALERHA-TSKI---AKIDDLQDITTLGFRGEALSSISAVSRLTLTSRQK 116
Query: 120 GRPNGYR------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV 173
GYR K+M + GTT+ +DLFYN P RRK+++ SP
Sbjct: 117 NAEMGYRISNISHKIMTPVPAAH--------PQGTTIDVQDLFYNTPARRKFLR-SPATE 167
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELL---CTCSSSSPLALLISSFGIEDFSFLD 230
+++ + R+AL H + +F+ +E E++ + S + S G
Sbjct: 168 FQHIRRIIERLALSH--FTTEFLLHHNEKEIIHFKPATTISGQENRIKSILGDVFMQSAL 225
Query: 231 EVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWK 290
+ + L + GYI+ + S QY+Y+N R+V I + L A D
Sbjct: 226 AIEFSQSGLTLKGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQ--AYHDV----- 278
Query: 291 ANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
G+ PAY+L L + D+ P K V F+D + V F+ A+++A
Sbjct: 279 ----LFHGRH------PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTA 328
Query: 351 WMKK---IAH 357
+ IAH
Sbjct: 329 LAQAKPGIAH 338
>gi|257386447|ref|YP_003176220.1| DNA mismatch repair protein MutL [Halomicrobium mukohataei DSM
12286]
gi|257168754|gb|ACV46513.1| DNA mismatch repair protein MutL [Halomicrobium mukohataei DSM
12286]
Length = 709
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 167/359 (46%), Gaps = 35/359 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSG 62
I RL A + +G V+ VV+ELV N++DA A +V V V +KV DDG G
Sbjct: 9 IRRLDSATVERIAAGEVVERPASVVKELVENALDADADRVSVAVEQGGIEGIKVTDDGIG 68
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+SR+ + E H TSK+ + D++ G+GT GFRGEAL +I VS I T+ GR
Sbjct: 69 MSREAVERAVEEHT-TSKISSIEDLE--RGVGTLGFRGEALHAIGAVSRTTITTRPRGRE 125
Query: 123 -NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
G V++G ++ GTT+ DLFYN P RRKY++ + + H V V
Sbjct: 126 HQGTELVVEGGDV--TAVEPAGCPAGTTIEVDDLFYNVPARRKYLKQTSTEFAH-VNTVV 182
Query: 182 LRIALVHPKVSFKFIDMESED--ELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN---D 236
AL +P V+ S D E T A ++S +G + + EV+ D
Sbjct: 183 TSYALANPDVAVTL----SHDGRETFATTGQGDLEATVLSVYGRDVAQSMIEVDDGDLPD 238
Query: 237 GALE-ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
G LE ++G +S P + + + + Y+N RYV + + + D D+ A + +
Sbjct: 239 GPLESVTGLVSHPETNRASRDYLSTYVNGRYVRADAVREAI------VDAYDTQLAPDRY 292
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P +L + D+ P K V F D E V +E A++SA + +
Sbjct: 293 -----------PFAVLFCAVDPATVDVNVHPRKMEVRFADDEGVRRQVEHAVQSALLSE 340
>gi|387926948|ref|ZP_10129627.1| DNA mismatch repair protein [Bacillus methanolicus PB1]
gi|387589092|gb|EIJ81412.1| DNA mismatch repair protein [Bacillus methanolicus PB1]
Length = 623
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 171/355 (48%), Gaps = 28/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I +L + + N + +G V+ VV+ELV N++DAG+T + V V ++V+D+
Sbjct: 1 MGKIIQLDDLLSNKIAAGEVVERPASVVKELVENAIDAGSTIIEVEVEEAGMAKIRVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + L +RH ATSK + D +D I T GFRGEAL SI+ VS LE+ T +
Sbjct: 61 GEGIEEEDVPLAFQRH-ATSK---IKDENDLFRIRTLGFRGEALPSIASVSRLELRT-ST 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G + V+KG + RK GT + DLF+N P R KY+++ + L ++
Sbjct: 116 GNDAGTKIVLKGGNVQSIEKSPSRK--GTDITVTDLFFNTPARLKYLKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL +P +SF+ + + +LL T + +L + +GI + ++
Sbjct: 173 VMNRLALGNPNISFRLV--HNGRKLLHTAGNGDMRQVLAAIYGINIVKKMIPISFESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+++GYIS P + + + + IN RY+ P+ K + + + L
Sbjct: 231 QVTGYISLPEVTRASRNYITTLINGRYIKNYPLVKAIQ------------EGYHTLLPIS 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
R P LLN++ L D P K V + + I+ A+ K
Sbjct: 279 R-----YPIVLLNIQMDPMLVDANVHPAKMEVRLSKEHELNELVANGIKQAFKTK 328
>gi|334136568|ref|ZP_08510029.1| DNA mismatch repair protein, C-terminal domain protein
[Paenibacillus sp. HGF7]
gi|333605901|gb|EGL17254.1| DNA mismatch repair protein, C-terminal domain protein
[Paenibacillus sp. HGF7]
Length = 788
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 166/357 (46%), Gaps = 29/357 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV NS+DAG++++ V ++V D+
Sbjct: 1 MGKIRLLDEHIANQIAAGEVVERPASVVKELVENSIDAGSSRIDVVAEEGGLQLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI + L RH ATSK+ D+ I T GFRGEAL SI+ VS E +T
Sbjct: 61 GSGIESEDCELAFYRH-ATSKIQSGKDL---FSIRTLGFRGEALPSIAAVSKTEFVTSTD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G + ++G + RK GT + ++LFYN P R KYM++ ++ H +
Sbjct: 117 GSGLGRKLAVEGGDVVTQEETSARK--GTDISVKELFYNTPARLKYMKTIQTELGH-ISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL HP+++F + + LL T L ++ +G + V
Sbjct: 174 YMYRLALAHPEIAFTL--KHNGNSLLQTLGGGDLLQVIAGVYGSAVGKQMIAVGGESLDY 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPI-HKLLNHLAASFDCSDSWKANNGFLKG 298
+ISGYIS P + + ++ + +N RYV + H ++N N F
Sbjct: 232 KISGYISRPELNRANRSAMSIMVNGRYVRSFAVQHAIMNGFHTLLPI-------NRF--- 281
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
P +L++ SL D+ P K V F ++ IE I+ A +++
Sbjct: 282 --------PVVVLHIEMDPSLVDVNVHPSKLEVRFSKEPELVKMIEDMIKEALGRQV 330
>gi|219851577|ref|YP_002466009.1| DNA mismatch repair protein [Methanosphaerula palustris E1-9c]
gi|219545836|gb|ACL16286.1| DNA mismatch repair protein MutL [Methanosphaerula palustris E1-9c]
Length = 603
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 171/356 (48%), Gaps = 39/356 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN---CYVKVVDDG 60
I +L +A N + +G V+ V +EL+ N++DAGA ++ V N +++VD+G
Sbjct: 6 IRQLDQATINQIAAGEVIERPASVAKELIENAIDAGADQIRCEVTTENGEITRIRIVDNG 65
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
G+SR+ + H TSKL L DD + I T GFRGEALASI VS + ++T+
Sbjct: 66 RGMSREDAAIACLPHT-TSKLRTL---DDLSTIHTMGFRGEALASIGAVSAMMLVTRQKE 121
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKD----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G R ++G G DE + +GTTV DLFYN P R+K+ Q S K L
Sbjct: 122 STSGTRVSIRG------GAIDEVAEAGSALGTTVTVDDLFYNTPARKKF-QKSLKTELGH 174
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V RIAL +P + F+ + + + T SS+ ++ +G E L V+A+D
Sbjct: 175 LYGIVERIALANPGIGFRL--LLNRRGRITTQRSSNKRDTIVGLYGPELARGLIPVSASD 232
Query: 237 GALEISGYISSPYDSISVKAFQ-YVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
G ++I G+IS P S ++ +Q ++ IN R + LLN + +
Sbjct: 233 GPVQIEGFISPPAIS-RLEPYQVHLSINRRDIYN---RALLNAIREGY------------ 276
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
G P L+L +L D+ P K V + V A + IR+A
Sbjct: 277 --GTLLPKDRYPVAFLDLTIDTTLVDVNVHPAKRQVRLDQEQTVTAAVTAMIRAAL 330
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Query: 1162 SCLEDAKVLQQVDKKF-IPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDA 1220
S L + +VL QV + I TL +IDQHAA ERI +++R ++V
Sbjct: 413 SNLPEMRVLGQVANTYLIAETPDQTLCLIDQHAAHERILYDQIRRN------RTVQT--- 463
Query: 1221 EQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCI 1280
QEL+ P + LQ AE I++ I F ++ + AVP I
Sbjct: 464 -QELITPVLLTVTLQE-AEAIREATPIFEREGFRIEEFGRD---------SFAVSAVPVI 512
Query: 1281 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKACRGAIMFGDSLLPSECALIV 1338
FG + D + + + +A G + R + + ACRGA+ G +L + ++
Sbjct: 513 FG-RIEDPE--QVREIIAGVIGEEPGDQTATRNAITSRVACRGAVKAGAALTNEQGEQLL 569
Query: 1339 EELKQTSLCFQCAHGRPTTV 1358
+L T F C HGRPT V
Sbjct: 570 AQLAATEDPFTCPHGRPTVV 589
>gi|166031821|ref|ZP_02234650.1| hypothetical protein DORFOR_01522 [Dorea formicigenerans ATCC
27755]
gi|166028274|gb|EDR47031.1| DNA mismatch repair domain protein [Dorea formicigenerans ATCC
27755]
Length = 698
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 149/279 (53%), Gaps = 14/279 (5%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ VV+EL N++DAGAT V V + G+ ++++
Sbjct: 1 MSKIQVLDQITIDKIAAGEVIERPASVVKELAENAIDAGATAVTVEIKEGGIT--FMRIA 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI ++ + RH+ TSK+ +D I + GFRGEAL+SI+ VS +E++TK
Sbjct: 59 DNGIGIDKEDVRAAFLRHS-TSKI---RSAEDLAHISSLGFRGEALSSIAAVSQVELLTK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G R + G K L +D GTT + R LFYN P RRK+++++ + H V
Sbjct: 115 TKEADFGVRYKIAGGKEESL--EDAGAPDGTTFLIRQLFYNTPARRKFLKTAMTEASH-V 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
V R+AL HP+VSF+FI+ + L T + + ++ +G E S L EV+
Sbjct: 172 GDLVTRLALSHPEVSFRFIN--NGQVKLHTSGNGNLKDVIYHIYGREIASNLIEVDFERK 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLL 276
+ I+GY+ P S + F+ +++ RY+ I K +
Sbjct: 230 GIHITGYLGKPLISRGNRNFENYFVDGRYIKSSIISKAI 268
>gi|375308897|ref|ZP_09774179.1| DNA mismatch repair protein mutL [Paenibacillus sp. Aloe-11]
gi|375079109|gb|EHS57335.1| DNA mismatch repair protein mutL [Paenibacillus sp. Aloe-11]
Length = 733
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 170/356 (47%), Gaps = 27/356 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I L E + N + +G V+ + VV+ELV N++DAG T+V V V ++V D+
Sbjct: 1 MSKIRVLDEHIANQIAAGEVVERPSSVVKELVENAIDAGGTRVDVSVEEGGLQSIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI + + RH ATSK+GH D+ T + GFRGEAL SI+ VS +E++T A
Sbjct: 61 GSGIEPEDVETAFYRH-ATSKIGHGRDLFQIT---SLGFRGEALPSIAAVSKVELLTAAG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ V++G K + +D GT R+LFYN P R KYM++ ++ H +
Sbjct: 117 DDGRARKLVIEGGKLMLH--EDAAARQGTDFTVRELFYNTPARLKYMKTIQTELGH-ISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL HP+V+F + + LL T + L ++ + +G + +
Sbjct: 174 VLYRMALSHPEVAFTL--RHNGNTLLQTLGNGDLLQVIAAIYGTSAAKSMLPLEGESLDY 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
ISG++S P + S + +N R+V +++ L KA + L
Sbjct: 232 RISGFVSRPEWTRSNRNAISTVVNGRFVRSYGLNQAL------------LKAYHTLLPIN 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
R P ++ L SL D+ P K V F + +E +I++ +++
Sbjct: 280 R-----FPLAVIQLEMHPSLVDVNVHPAKLEVRFSKETELFQLVEDSIKAVLGQQV 330
>gi|422867025|ref|ZP_16913628.1| DNA mismatch repair protein [Enterococcus faecalis TX1467]
gi|329577814|gb|EGG59237.1| DNA mismatch repair protein [Enterococcus faecalis TX1467]
Length = 710
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 ISDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|161830565|ref|YP_001596643.1| DNA mismatch repair protein [Coxiella burnetii RSA 331]
gi|81839061|sp|Q83CM9.1|MUTL_COXBU RecName: Full=DNA mismatch repair protein MutL
gi|189030397|sp|A9NCK3.1|MUTL_COXBR RecName: Full=DNA mismatch repair protein MutL
gi|161762432|gb|ABX78074.1| DNA mismatch repair protein MutL [Coxiella burnetii RSA 331]
Length = 574
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 171/360 (47%), Gaps = 42/360 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I RL + N + +G V+ VV+EL+ NS+DA A+ + V + +++ DDG G
Sbjct: 3 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + LVL ERHA TSK+ A +DD I T GFRGEALASIS VS L + ++
Sbjct: 63 IHPEDLVLALERHA-TSKI---AKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAE 118
Query: 123 NGYR------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
GYR K+M + GTT+ +DLFYN P RRK+++ SP
Sbjct: 119 MGYRISNISHKIMTPVPAAH--------PQGTTIDVQDLFYNTPARRKFLR-SPATEFQH 169
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA-- 234
+++ + R+AL H + +F+ +E E++ S+++ I F+ A
Sbjct: 170 IRRIIERLALSH--FTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIE 227
Query: 235 -NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+ L + GYI+ + S QY+Y+N R+V + + L A D
Sbjct: 228 FSQSGLTLKGYIAEAAYTRSQPDLQYIYVNGRFVRDKLVAQALRQ--AYHDV-------- 277
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
G+ PAY+L L + D+ P K V F+D + V F+ A+++A +
Sbjct: 278 -LFHGRH------PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTALAQ 330
>gi|357636280|ref|ZP_09134155.1| DNA mismatch repair protein [Streptococcus macacae NCTC 11558]
gi|357584734|gb|EHJ51937.1| DNA mismatch repair protein [Streptococcus macacae NCTC 11558]
Length = 648
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 184/398 (46%), Gaps = 46/398 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + V ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPASVVKELVENAIDAKSSQITIEVEESGLKTIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI ++ + + RH ATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GQGIEKEEVAMSLRRH-ATSKIKNQSDL---FRIRTLGFRGEALPSIASVSKMTIKTAVA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G + G K I+ E +GT V DLF+N P R KYM+S ++ H
Sbjct: 117 KESHGTLLLSIGGK-----IEQEEPYSTPIGTKVTVEDLFFNTPARLKYMKSLQVELGHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R++L HP+++F I+ EL T + + +G+ + E+ +D
Sbjct: 172 I-DTVNRMSLAHPEIAFTLIN--DGKELTKTSGNGDLRQAIAGIYGLNTAKKMIEITGSD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+++GY+S P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFDLTGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
G +SK P ++ ++ L D+ P K V + ++ I AI K+
Sbjct: 270 DGYKSKLMVGRFPIAVIAIQIDPYLADVNVHPTKQEVRISKEKELMQLISTAISEGLRKQ 329
Query: 355 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLK 392
D++ DA L S +S Q +T + PLK
Sbjct: 330 --------DLIPDALENLAKSSTRSAQKATQT-TLPLK 358
>gi|238019354|ref|ZP_04599780.1| hypothetical protein VEIDISOL_01218 [Veillonella dispar ATCC 17748]
gi|237864053|gb|EEP65343.1| hypothetical protein VEIDISOL_01218 [Veillonella dispar ATCC 17748]
Length = 673
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 171/356 (48%), Gaps = 35/356 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M TI+ L E N + +G V+ V++EL+ NS+DA AT + V +G Y+++ D+
Sbjct: 1 MATIHVLDETTINKIAAGEVVERPASVIKELIENSIDASATNIEVEIGDGGVAYMRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + L RH ATSK+ H+ D+ D I + GFRGEALASI+ VS + T+
Sbjct: 61 GIGMTEEDARLAILRH-ATSKIQHVEDLFD---IASLGFRGEALASIASVSHFSMTTRKA 116
Query: 120 GRPNGYRKVMKG---SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G R + G + C+ G GTT+ RDLFYN P RRK++++ +
Sbjct: 117 DADLGTRITVDGGTFTDCIPYG-----AAPGTTIEIRDLFYNTPARRKFLKTE-RTESSK 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAN 235
++ V ++AL +P +SFK I +D + + + +++ +G + + V
Sbjct: 171 IQDIVGKLALSNPHISFKLI---IDDRVAIITPGNGNIGDTVAALYGYKTKDDIFTVAYE 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
++ I G +S P S + +Q + +N+R + I K ++ + + NG
Sbjct: 228 SDSIYIDGVVSKPTLLKSTRIWQTIIVNNRVISDKTIMKAID------NAYHALLPKNGH 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P +LN+ P + D+ P K+ V F D + + + I +A
Sbjct: 282 -----------PLVVLNITVPAEMVDINVHPRKSEVKFSDDKIIFKAVYHGILNAL 326
Score = 47.8 bits (112), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 80/192 (41%), Gaps = 26/192 (13%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI 1229
+ QV +I G L +IDQHAA ER+R ++L S E + + Q +
Sbjct: 491 MGQVASCYILAKKGDDLYIIDQHAAHERVRYDKL---CKSSEAIPMQSILVPQYSEATDD 547
Query: 1230 GYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVD 1289
L++ E + D G+ +I G T I L+ P V+L +
Sbjct: 548 EMNLVEEEREILLDLGF--DIELGGP--------------TKIKLVGAP----VDLVESK 587
Query: 1290 LLEFLQQLADTDGSSTTPPSV-LR--VLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
E LQ + P LR +L +CRGAI G +L + ++E+L T
Sbjct: 588 AFEILQYVFSYLHDHQQPTKAQLRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEK 647
Query: 1347 CFQCAHGRPTTV 1358
+ C HGRPT +
Sbjct: 648 PYVCPHGRPTII 659
>gi|433445605|ref|ZP_20409955.1| DNA mismatch repair protein MutL [Anoxybacillus flavithermus
TNO-09.006]
gi|432001019|gb|ELK21906.1| DNA mismatch repair protein MutL [Anoxybacillus flavithermus
TNO-09.006]
Length = 608
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 168/355 (47%), Gaps = 28/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I +L EA+ N + +G V+ VV+ELV N++DA +T + V + ++VVD+
Sbjct: 1 MGKIRKLDEALANKIAAGEVVERPASVVKELVENAIDAHSTIIEVELEEAGLAKIRVVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G + L ERH ATSK + D D I T GFRGEAL SI+ VS LE+ T
Sbjct: 61 GDGFEEEDCFLAFERH-ATSK---IKDEADLFRIRTLGFRGEALPSIASVSHLELKTST- 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G V+KG + + G RK GT V LF+N P R KYM++ ++ H V
Sbjct: 116 GEGPGTWLVLKGGELVQHGRTSSRK--GTDVTVSHLFFNTPARLKYMKTIHTELGHVV-D 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL HP +SF+ + +L T + +L + +G++ + ++A
Sbjct: 173 VINRLALAHPHISFRL--THNGKQLFYTNGNGDVRQVLAAIYGLDVAKKMIAIHAETLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RY+ ++K + + + L
Sbjct: 231 TIDGYVALPEVTRASRNYMTTIVNGRYIKNYSLYKAIE------------EGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
R P LN+ L D+ P K V F + +++ IR ++ KK
Sbjct: 279 RH-----PITFLNVMMDPLLIDVNVHPAKLEVRFSKEAELNELVQQTIRQSFQKK 328
>gi|110597213|ref|ZP_01385501.1| DNA mismatch repair protein MutL [Chlorobium ferrooxidans DSM
13031]
gi|110341049|gb|EAT59517.1| DNA mismatch repair protein MutL [Chlorobium ferrooxidans DSM
13031]
Length = 626
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 179/355 (50%), Gaps = 36/355 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I RLP+++ N + +G V+ VV+EL+ NS+DAGA K+ + V +++VD+
Sbjct: 1 MARIARLPDSIANKISAGEVVQRPASVVKELLENSIDAGADKITLSVKDAGKELIRIVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G+G+ R+ +L ER ATSK+ + D+D + T GFRGEALASIS VS E+ T+
Sbjct: 61 GAGMLREDALLCVERF-ATSKIIGVEDLD---SLKTLGFRGEALASISSVSHFELKTRTA 116
Query: 120 GRPNGYR-KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R + G G+ E+ GTT+ R+LFYN P RRK+++S+ + H +
Sbjct: 117 KETLGLRFRYEGGVLAEESGVQGEQ---GTTMSVRNLFYNVPARRKFLKSNATEFQH-IF 172
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFS-FLDEVNANDG 237
+ + AL +P++ ++ M ++DE L + +A ++ F DFS L E++ +
Sbjct: 173 EVIKSFALAYPEIEWR---MYNDDEELFHFRTPE-MAERLNFFYGSDFSDSLIELSEEND 228
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
L I G++ P K QY +IN R + +++L S + + G L
Sbjct: 229 YLSIRGFLGKPAMQKRKKLDQYFFINRRVIQ----NRML---------SQAVQQAYGELL 275
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV----LAFIERAIR 348
+R P LL L S D+ P K V F D V I+RAI+
Sbjct: 276 VERQ----APFVLLFLEIDPSRIDVNVHPAKLEVRFDDERSVRNMFYPVIKRAIQ 326
>gi|357404925|ref|YP_004916849.1| DNA mismatch repair protein MutL [Methylomicrobium alcaliphilum
20Z]
gi|351717590|emb|CCE23255.1| DNA mismatch repair protein MutL [Methylomicrobium alcaliphilum
20Z]
Length = 605
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 190/399 (47%), Gaps = 37/399 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSG 62
I+ LP + N + +G V+ + VV+ELV N DAGAT V + + +K+ DDG G
Sbjct: 3 IHSLPTQLVNQIAAGEVVERPSSVVKELVENCFDAGATSVAIEIEQGGMRRIKIRDDGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD + T GFRGEAL SIS V+ L +I++
Sbjct: 63 IDKDDLPLALSRHA-TSKI---ATLDDLEHVSTMGFRGEALPSISSVARLTLISRTEAAD 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+R GS+ + D + D GTTV RDLFYN P RRK++++ + H ++
Sbjct: 119 CAWRVDADGSEQNF----DPKPDPHPQGTTVDVRDLFYNTPARRKFLKTEKTEFGH-IET 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD---EVNAND 236
+ R+AL + F ++ E+L ++ + GI F+D +++
Sbjct: 174 LIKRMALSRFDIGFAL--THNQREVLNLKPVTTEVQREQRIAGICGSEFIDNSVKIDFEA 231
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
L+++G++ P S S + Q+ Y+N R + KL++H +A L
Sbjct: 232 SGLQLTGWVGLPTFSRSQQDMQFFYVNGRLIKD----KLVSHAVK--------QAYQDVL 279
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-RS-AWMKK 354
R P ++L L +L D+ P K V F++ V F+ RA+ RS A ++
Sbjct: 280 YHGRH-----PVFVLYLNLDPALVDVNAHPAKLEVRFREGRLVHDFLYRALHRSLADLRP 334
Query: 355 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKN 393
+ + V + E +P ++S + P +N
Sbjct: 335 GSQEQRSVPIEEFVPMPPQTSEQPPVNPQVQFQAKPKQN 373
Score = 45.8 bits (107), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 23/182 (12%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP-EIGYQLLQ-NFAEQIKD 1243
+ ++D HAA ER+ E L+ + +G S Q L+LP +I + + AEQ +D
Sbjct: 435 IILVDTHAAHERVTYERLKQQFNNGSVPS-------QPLLLPIKIAVSAGEADLAEQHQD 487
Query: 1244 WGWICNIHTQGSRSFNK-NLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG 1302
+ FN L + I L +VP + S+ + + L + +
Sbjct: 488 F-------------FNALGFELNRSGPETIVLRSVPVLLAGGDSEALIRDVLADIIEHGL 534
Query: 1303 SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVN 1362
S+ VL + AC G++ L E ++ ++++T QC HGRPT V L
Sbjct: 535 STRIQEKANEVLATVACHGSVRARRRLSIDEMNALLRDMERTERIGQCNHGRPTWVELST 594
Query: 1363 LE 1364
E
Sbjct: 595 QE 596
>gi|86133303|ref|ZP_01051885.1| DNA mismatch repair protein MutL [Polaribacter sp. MED152]
gi|85820166|gb|EAQ41313.1| DNA mismatch repair protein MutL [Polaribacter sp. MED152]
Length = 604
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 169/346 (48%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGAT + + ++V+DDG G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATSIKLLLKDAGKTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERH ATSK+ D+ + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSATDARMCFERH-ATSKIQKAEDL---FNLCTKGFRGEALASIAAIAHVELKTKQENEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++GS + K G ++ ++LFYN P RR +++S + H + +
Sbjct: 121 LGTCLKIEGSTVISQDFISTGK--GASIAVKNLFYNIPARRNFLKSDTVETRHVIDE-FQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP ++F +E + SS+ +++ FG + L +N L+I
Sbjct: 178 RVALAHPSIAFLLHHNNNE---VYHLKSSNLRQRIVAVFGAKMNEKLVPINEQTDILDIK 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+++ P + + Q+ ++N R++ LNH + A +G L +
Sbjct: 235 GFVAKPEFAKRKRGEQFFFVNDRFIKSS----YLNHAVVN--------AFDGLL-----E 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+ P+Y L L+ P + D+ P KT + F + + + A + ++
Sbjct: 278 QGSHPSYFLYLKVPANTIDINIHPTKTEIKFDNEKALYAMLRATVK 323
>gi|255974226|ref|ZP_05424812.1| DNA mismatch repair protein mutL [Enterococcus faecalis T2]
gi|307284812|ref|ZP_07564968.1| DNA mismatch repair protein [Enterococcus faecalis TX0860]
gi|255967098|gb|EET97720.1| DNA mismatch repair protein mutL [Enterococcus faecalis T2]
gi|306503071|gb|EFM72328.1| DNA mismatch repair protein [Enterococcus faecalis TX0860]
Length = 710
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|167745631|ref|ZP_02417758.1| hypothetical protein ANACAC_00323 [Anaerostipes caccae DSM 14662]
gi|167654943|gb|EDR99072.1| DNA mismatch repair domain protein [Anaerostipes caccae DSM 14662]
Length = 620
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 169/350 (48%), Gaps = 29/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I L + + + +G V+ VV+ELV N++DA AT V V + ++V D+
Sbjct: 1 MAEIQLLDQKTIDNIAAGEVIERPASVVKELVENAIDAKATAVTVEIRDGGMTLMRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI ++ + RHA TSK+ ++D + + GFRGEAL+SIS V +E+ITK
Sbjct: 61 GCGIPKEEVRTAFLRHA-TSKI---RTVEDLVSVSSLGFRGEALSSISAVGQVEVITKTA 116
Query: 120 GRPNGYR-KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G +G K+ G + G+D+ GTT + R+LFYN P RRK+++ SP V+
Sbjct: 117 GAFSGVSYKIFGGEEQ---GLDEIGAPDGTTFLVRNLFYNTPARRKFLK-SPVTEAGYVE 172
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ ++ +AL HP ++FKFI + + T + + ++ +G + L ++
Sbjct: 173 QIMVHMALSHPDIAFKFI--HNSKNKMYTSGNGNVKDIIYHLYGRDVAGALLPISLKGPT 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ + GY+ P+ S + ++ +IN RY+ I+K + +F + +
Sbjct: 231 VSVDGYVGKPFISRGNRNYESYFINGRYIKSKIIYKAIEDGYKTFTMAHKY--------- 281
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P LN+ L D+ P K + F++ + + + I+
Sbjct: 282 --------PFVCLNIEVEPELLDVNVHPTKMEIRFRNEKELYELLASGIK 323
Score = 41.2 bits (95), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 28/204 (13%)
Query: 1166 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEEL----RHKVLSGEGKSVAYLDAE 1221
D KV+ Q+ K + + L ++DQHAA E++ E+L R K + +G Y+
Sbjct: 431 DRKVIGQLFKTYWLIEYEDQLFIMDQHAAHEKVNYEKLMKSFREKKIYSQGVEPPYV--- 487
Query: 1222 QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-I 1280
+ L ++L+ + ++ G+ I G F + VP +
Sbjct: 488 --VTLSMAEAKVLEETKDIFQELGF--TIEAFGGNEF--------------CIRQVPANL 529
Query: 1281 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1340
+G+ ++ +E L L DG P + + S AC+ + + E +++
Sbjct: 530 YGLKEKEL-FMELLDSLT-ADGVKKDPEMITDKIASMACKMSAKGNQRMSLPEVRNLLDL 587
Query: 1341 LKQTSLCFQCAHGRPTTVPLVNLE 1364
L + + C HGRPT + + E
Sbjct: 588 LMECENPYTCPHGRPTMIKMSKYE 611
>gi|388581744|gb|EIM22051.1| hypothetical protein WALSEDRAFT_45169 [Wallemia sebi CBS 633.66]
Length = 660
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 166/329 (50%), Gaps = 27/329 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M +I +L + R+ +RS ++ + ++ EL+ N+++A +T++ V + + + +K+ D+G
Sbjct: 1 MRSIRKLSDEARSGIRSAYIITSVQQLTRELLDNAIEADSTQIQVLISLDDWSIKLTDNG 60
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
GI +D L LG H ++ K G +GE LASIS ++ L+I T+
Sbjct: 61 IGIQKDSLAELGRSHMSSKK----------------GSKGETLASISQLASLKITTRHAS 104
Query: 121 RPNGYRKVMKGSKCLYLGI--DDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
+ + + + +Y G+ D R GT V D+F N PVRRK + + + +H +K
Sbjct: 105 SLSTHTLIARAGHSVYFGLSLDGNRSSRGTVVTVTDIFANIPVRRKSLNKA--REIHGIK 162
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ +ALVHP+++F+ S+ L+ S ++ FG ++E+N +
Sbjct: 163 SDMQSLALVHPEIAFEL--RNSQQILIQLPPSHDTVSRFREIFGYALAEHVEEINYHGSD 220
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAA--SFDCSDSWKANNGFL 296
+ G++S + +A+QY+++NS + G +H +++ A SF + A+
Sbjct: 221 HVVDGFMS--LECAHSRAYQYIFVNSHLIVAGDLHSVVSTTFAESSFGVMANEPASMES- 277
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFD 325
R +Q P +LL++ P S+ + T+D
Sbjct: 278 NASRRHAQRYPVFLLHIHIPSSILESTYD 306
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 107/222 (48%), Gaps = 49/222 (22%)
Query: 1159 INKSCLEDAKVLQQVDKKFIPVVAG--GTLAVIDQHAADERIRLEELRHKVLSGEGKSVA 1216
+ K+ +E+A+V+ QVD KFI V L DQHA DERIR+E
Sbjct: 462 LTKADIENARVVGQVDDKFIMAVVTTKNALVAFDQHAVDERIRVER-------------- 507
Query: 1217 YLDA-----EQELVLPEIGYQL-------LQNFAEQIKDWGWICNIHTQGSRSFNKNLNL 1264
YL+A + LV P IG L L E ++ WG++ +I + S+
Sbjct: 508 YLEALIRRDDIVLVDPPIGTLLTYEEMRTLGTNVETVEQWGFLIDIDIKPSQEHYG---- 563
Query: 1265 LQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG--SSTT----------PPSVLR 1312
Q+ V TL V + + + L++ + Q A G STT PP++L
Sbjct: 564 ---QVFVKTLPGV--MHDRLIREPKLVQDIIQEAVARGMNESTTLNWHVMVGLCPPTLLS 618
Query: 1313 VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGR 1354
++NSKACR +I FGD+L +C ++++ L T +QCAHGR
Sbjct: 619 LVNSKACRNSIKFGDTLSMRDCEMLLQSLSHTKNPYQCAHGR 660
>gi|422725489|ref|ZP_16781949.1| DNA mismatch repair protein [Enterococcus faecalis TX0312]
gi|315159532|gb|EFU03549.1| DNA mismatch repair protein [Enterococcus faecalis TX0312]
Length = 710
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGHGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|227824421|ref|ZP_03989253.1| DNA mismatch repair protein mutL [Acidaminococcus sp. D21]
gi|352684319|ref|YP_004896304.1| DNA mismatch repair protein mutL [Acidaminococcus intestini
RyC-MR95]
gi|226904920|gb|EEH90838.1| DNA mismatch repair protein mutL [Acidaminococcus sp. D21]
gi|350278974|gb|AEQ22164.1| DNA mismatch repair protein mutL [Acidaminococcus intestini
RyC-MR95]
Length = 628
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 166/356 (46%), Gaps = 33/356 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGAT--KVFVYVGVCNCYVKVVDDGS 61
+ L + N + +G V+ VV+ELV N++DAGAT V +Y G Y++V D+GS
Sbjct: 5 VQLLDQNTSNQIAAGEVVEKPMSVVKELVENALDAGATHVDVTIYEGGTE-YIRVKDNGS 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+ + L RHA TSK+ +D + T GFRGEAL SI+ VS ++T+ G
Sbjct: 64 GMDEENARLAVLRHA-TSKI---VKAEDLLTLKTLGFRGEALPSIASVSHFNLLTREEGA 119
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ G + + +D DVGTTV +DLFYN P RRK++++ + + + +
Sbjct: 120 EFATSITIDGGENM--SVDVMGGDVGTTVTVKDLFYNVPARRKFLRTVSTEGRY-INDIL 176
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
++AL P V F ++ E+L T S L ++ + +G L V+ + +
Sbjct: 177 SKMALSRPDVHFTL--QNNDKEVLNTPGSGDELDVIGALYGKNVVEALLPVDHEQDGIRV 234
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
G+IS P + +Q +++N RY+ + + ++H S +GF
Sbjct: 235 KGFISRPTLLKGTRQWQTLFVNDRYIVSRMVSRAIDH------AYQSQIPKSGF------ 282
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
P +L L D+ P K+ + F D + V RA+ A + H
Sbjct: 283 -----PFAMLKLTVDTHAIDINVHPQKSEIKFGDEQAVY----RAVYHALTNALTH 329
>gi|395212595|ref|ZP_10399868.1| DNA mismatch repair protein [Pontibacter sp. BAB1700]
gi|394457112|gb|EJF11305.1| DNA mismatch repair protein [Pontibacter sp. BAB1700]
Length = 608
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 170/349 (48%), Gaps = 28/349 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP+ + N + +G V+ + VV+EL+ N++DA AT V + V V+VVD+G G
Sbjct: 5 IHLLPDYLANQIAAGEVVQRPSSVVKELLENAIDARATSVQLIVKEAGKQLVQVVDNGIG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERHA TSK+ +D I T GFRGEA+ASI V+ +E+ TK HG
Sbjct: 65 MSETDARMCFERHA-TSKI---KSTEDLFRIRTMGFRGEAMASIGAVAQVELKTKPHGAE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G R +++GS + GT++ ++LFYN P RR +++++ ++ H + +
Sbjct: 121 TGTRLLVEGSTVAAQ--EPAAIAAGTSIAVKNLFYNVPARRNFLKTNAVEMRHILDEF-Q 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL +P+V+F E E + + + ++ FG + + +
Sbjct: 178 RVALAYPEVAFTLHHNEVE---IFSLPAGKLSQRIVGVFGNNHKEQMAGCEEETPFMSVR 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GYI P + + Q+ ++N+R++ G LNH + A G L
Sbjct: 235 GYIGKPEFAKKTRGEQFFFVNNRFIKSG----YLNHAVMT--------AYEGLL-----P 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
+ P Y+L + D+ P KT + F+D + V A + A++ +
Sbjct: 278 KDSHPFYVLFIDIEPERIDINVHPTKTEIKFEDEKTVYAIVHAAVKKSL 326
>gi|385332242|ref|YP_005886193.1| LOW QUALITY PROTEIN: DNA mismatch repair protein mutL [Marinobacter
adhaerens HP15]
gi|311695392|gb|ADP98265.1| LOW QUALITY PROTEIN: DNA mismatch repair protein mutL [Marinobacter
adhaerens HP15]
Length = 630
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 164/352 (46%), Gaps = 29/352 (8%)
Query: 13 NTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLL 71
N + +G V+ VV+ELV N++DAGA +V V V ++V DDGSGI D L L
Sbjct: 8 NQIAAGEVVERPASVVKELVENALDAGANRVDVEVEQGGVKLIRVRDDGSGIEEDDLPLA 67
Query: 72 GERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKG 131
RHA TSK+ A +DD + + GFRGEALASIS VS L + ++ + R ++G
Sbjct: 68 LSRHA-TSKI---ASLDDLEAVASLGFRGEALASISSVSRLTLTSRTESQEAASRVEVEG 123
Query: 132 SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKV 191
+ + I VGTTV RDLF+N P RRK++++ + H V++CV R AL
Sbjct: 124 RE-MDARISPAAHPVGTTVEVRDLFFNTPARRKFLRTEKTEFNH-VEECVRRQALSRFDA 181
Query: 192 SFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNANDGALEISGYISSP 248
F + + L S+ I S + F+D ++A L + G+++ P
Sbjct: 182 GFTLRHNQRVVQSLRPAESALDRERRIGSLCGQ--QFIDNAVVIDAEATGLRLWGWVALP 239
Query: 249 YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPA 308
S S QY ++N R + +L+ H +A L R PA
Sbjct: 240 TFSRSQADLQYFFVNGRVIRD----RLVAHAVR--------QAYRDVLYNNRH-----PA 282
Query: 309 YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 360
++L L + D+ P K V F+D V FI R + A D F
Sbjct: 283 FVLYLEVDPATVDVNVHPTKHEVRFRDGRLVHDFIFRTLHKALADVRPDDHF 334
>gi|153853166|ref|ZP_01994575.1| hypothetical protein DORLON_00560 [Dorea longicatena DSM 13814]
gi|149753952|gb|EDM63883.1| DNA mismatch repair domain protein [Dorea longicatena DSM 13814]
Length = 701
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 168/357 (47%), Gaps = 31/357 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + +G V+ VV+ELV N++DAGAT + V + G+ ++++
Sbjct: 1 MSKIQVLDPITIDKIAAGEVIERPASVVKELVENAIDAGATAIVVEIKEGGIS--FMRIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI RD + RH+ TSK+ +DD IG+ GFRGEAL+SIS V+ +E+ITK
Sbjct: 59 DNGCGIERDDVRSAFLRHS-TSKI---RSVDDLVHIGSLGFRGEALSSISAVAQVELITK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
+ G + G K L +D GTT + R LFYN P RRK++++ + H V
Sbjct: 115 TRDQTFGTLYRIAGGKEEDL--EDTGAPDGTTFIIRQLFYNTPARRKFLKTPMTEASH-V 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ R+AL HP +SF+FI+ + L T + ++ +G + + L + +
Sbjct: 172 GDLMTRLALSHPHISFQFIN--NGQSKLHTSGNGKLKDVIYHIYGRDIAANLLKAEYDAK 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
L+++G++ P S + F+ Y+N RY I + + F +
Sbjct: 230 GLKVTGFLGKPIISRGNRNFENYYVNGRYAKNNIISRAIEDAYKDFTMQHKY-------- 281
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P +L++ D+ P K + F + + V I A+ +K
Sbjct: 282 ---------PFVVLHIEIDGEHVDVNVHPTKMELRFNNQQEVYNAIYSAVDQGLHEK 329
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 1152 EFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGE 1211
E F + + ++ KV+ QV + + V +L +IDQHAA ER+ L K L
Sbjct: 497 ELFEDHLLTREAMQKYKVVGQVFETYWLVEYDNSLYIIDQHAAHERV----LYEKTL--- 549
Query: 1212 GKSVAYLDAEQELVLPEIGY-------QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNL 1264
KS+ + +++ P I +LL + +Q G+ I G S+
Sbjct: 550 -KSMKTREFTSQMISPPIVLNLSMQEAELLNTYMDQFTRIGF--EIEEFGQDSY------ 600
Query: 1265 LQRQITVITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAI 1323
+ AVP +F + ++ L++ L L+D + +P + + S +C+ A+
Sbjct: 601 --------AVRAVPDNLFSIAKKEL-LIQMLDSLSDEITRNQSPDLIDEKIASMSCKAAV 651
Query: 1324 MFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1364
L E ++ EL + C HGRPT + + E
Sbjct: 652 KGNMKLSVQEVDALIGELLSLDNPYHCPHGRPTIIAMTKRE 692
>gi|402832234|ref|ZP_10880887.1| DNA mismatch repair protein, C-terminal domain protein
[Capnocytophaga sp. CM59]
gi|402278140|gb|EJU27205.1| DNA mismatch repair protein, C-terminal domain protein
[Capnocytophaga sp. CM59]
Length = 608
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 177/373 (47%), Gaps = 37/373 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ V+EL+ N++DAGAT++ +Y+ V+VVD+G G
Sbjct: 5 IRLLPDNVANQIAAGEVIQRPASAVKELLENAIDAGATQIKLYLKDAGRTLVQVVDNGIG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ DD + T GFRGEALASI+ ++ +E+IT G+
Sbjct: 65 MSPTDARLAFERHA-TSKI---RSADDLFTLHTKGFRGEALASIASIAQVELITCQEGQE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G ++G+K I ++ V GT++ + LF+N P RR +++S ++ H + +
Sbjct: 121 VGTSLKIEGNK-----ITEQTPMVASRGTSIAMKHLFFNVPARRNFLKSDTVEMRHILDE 175
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
R+ L HP + F + E L + + L FG L V N L
Sbjct: 176 F-HRVVLAHPDLQFSLFHNDVEQFALPATTLRKRIVQL---FGQRLNEQLIPVEENTELL 231
Query: 240 EISGYISSPYDSISV-KAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
I G+IS DS K+ Q+ +N R++ ++ L+H S A G LK
Sbjct: 232 RIHGFISK--DSYKKNKSLQFFMVNQRFIK----NRYLHHAVVS--------AFEGLLKE 277
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
P Y L+L D+ P KT + F + + + A + AI+ + +
Sbjct: 278 GEQ-----PEYFLHLEIDPKHIDINIHPTKTEIKFDNDQAIYALLRSAIKHSLGQFHVLP 332
Query: 359 SFDVDMLEDAELP 371
S D + E E+P
Sbjct: 333 SIDFSLDEQNEVP 345
>gi|226312962|ref|YP_002772856.1| DNA mismatch repair protein MutL [Brevibacillus brevis NBRC 100599]
gi|226095910|dbj|BAH44352.1| DNA mismatch repair protein MutL [Brevibacillus brevis NBRC 100599]
Length = 690
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 168/352 (47%), Gaps = 33/352 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MGTI L E + N + +G V+ VV+ELV NS+DA AT + ++V +++VD+
Sbjct: 1 MGTIQVLDEQLANMIAAGEVVERPASVVKELVENSIDARATTIEIHVEEGGLEMIRIVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ R+ L ERH ATSK+ + D+ I T GFRGEAL SI+ VS +E+ +
Sbjct: 61 GRGMDREDCQLAFERH-ATSKISNARDL---FRIRTLGFRGEALPSIAAVSRMELTSSTS 116
Query: 120 GRPNGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G +++G + LG I D+ GT V R LF+N P R KYM+S +V H +
Sbjct: 117 SSEVGTHLLIEGGQ---LGTISDKAAVKGTEVCVRSLFFNTPARLKYMKSIATEVGH-IS 172
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
V R+AL HP +SF + LL T L ++ + +G++ L +
Sbjct: 173 DYVNRLALTHPSISFLL--THNGKTLLQTSGDGKLLHVMAAIYGVQVAKLLLPIAGETLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ SG++S + + +++ +N RYV S+ NN ++G
Sbjct: 231 YKWSGFLSKTEVTRANRSYLSTLVNGRYV-------------------RSYSINNAIMRG 271
Query: 299 KRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+ P L + SL D+ P K F + + + IE++++
Sbjct: 272 YHTLLPIGRYPIVALQIEMDPSLVDVNVHPAKLEARFSKEDELCSAIEQSVK 323
>gi|157368676|ref|YP_001476665.1| DNA mismatch repair protein [Serratia proteamaculans 568]
gi|167012378|sp|A8G8U7.1|MUTL_SERP5 RecName: Full=DNA mismatch repair protein MutL
gi|157320440|gb|ABV39537.1| DNA mismatch repair protein MutL [Serratia proteamaculans 568]
Length = 624
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 172/350 (49%), Gaps = 33/350 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ + +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARHA-TSKI---STLDDLEAIVSLGFRGEALASISSVSRLTLTSRTAEQN 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + +G+T+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDQAVTVKPAAHPIGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLD---EVNANDGA 238
RIAL V+ I++ +L+ ++ + G I +FL ++ G
Sbjct: 177 RIALARFDVA---INLSHNGKLMRQYRAAKDESQYERRLGSICGPAFLQHALNISWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P + + QY Y+NSR + +L+NH A D K +
Sbjct: 234 LTIRGWVADPAGARQLGEMQYCYVNSRMMRD----RLINH-AIRQAYQDQLKDDQQ---- 284
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 285 --------PAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|304438412|ref|ZP_07398352.1| DNA mismatch repair protein MutL [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368495|gb|EFM22180.1| DNA mismatch repair protein MutL [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 622
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 174/354 (49%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L +A N + +G V+ VV+ELV N++DAGAT V V + G +++V D+
Sbjct: 1 MTRIHVLDDATINKIAAGEVVERPASVVKELVENAMDAGATAVEVEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + RH ATSK+ +D++ I T GFRGEAL +I+ VS ++T+
Sbjct: 61 GRGMTGEDARAAILRH-ATSKIAAASDLET---IATLGFRGEALPTIASVSHFSLLTRQA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G I+D VGT+V DLF+N P R+K+++++ + +
Sbjct: 117 ADDLGTRVDISGGGTPM--IEDAGCAVGTSVRVEDLFFNTPARKKFLKTNATEA-GKISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
V+R+AL P ++F+FI+ + + + LA I S +G + S L ++ D A
Sbjct: 174 YVIRLALSRPDIAFRFIN---NNRMTIMTAGDGDLARTIGSIYGGDAASALIPLDFYDDA 230
Query: 239 --LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ I+GYIS P S +A+Q +N R + I K ++++ S GF
Sbjct: 231 ADIRITGYISKPSLIRSSRAWQTYIVNGRTIQNRAIAKAIDNV------YRSLVPKMGF- 283
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P ++ + P D+ P KT + F+D + + +A+ A
Sbjct: 284 ----------PLAVIVITVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKAVLDA 327
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 80/204 (39%), Gaps = 50/204 (24%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1216
+ QVD +I + TL +IDQHAA ERI + L H +LS +
Sbjct: 436 IGQVDLTYIIAQSTATLYIIDQHAAHERILFDRFSAQTDGIPSQQMLVHAILSFDAHEAQ 495
Query: 1217 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
Y++ EL +G+ L G R++ L
Sbjct: 496 YIEENAEL-FDRLGFHL-----------------EAAGERTYR--------------LTE 523
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKACRGAIMFGDSLLPSEC 1334
P ++ + E L L D T P+ LR + + ACR AI G+ L +
Sbjct: 524 TPADVPTKEAEGIIREILASLGDL---HTATPANLREAGIATMACRAAIKAGEELSIRQM 580
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTV 1358
+++EEL+ T F C HGRPT +
Sbjct: 581 EILLEELRATPFPFTCPHGRPTIL 604
>gi|317472766|ref|ZP_07932078.1| DNA mismatch repair protein MutL [Anaerostipes sp. 3_2_56FAA]
gi|316899758|gb|EFV21760.1| DNA mismatch repair protein MutL [Anaerostipes sp. 3_2_56FAA]
Length = 620
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 169/350 (48%), Gaps = 29/350 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I L + + + +G V+ VV+ELV N++DA AT V V + ++V D+
Sbjct: 1 MAEIQLLDQKTIDNIAAGEVIERPASVVKELVENAIDAKATAVTVEIRDGGMTLMRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI ++ + RHA TSK+ ++D + + GFRGEAL+SIS V +E+ITK
Sbjct: 61 GCGIPKEEVRTAFLRHA-TSKI---RTVEDLVSVSSLGFRGEALSSISAVGQVEVITKTA 116
Query: 120 GRPNGYR-KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G +G K+ G + G+D+ GTT + R+LFYN P RRK+++ SP V+
Sbjct: 117 GAFSGVSYKIFGGEEQ---GLDEIGAPDGTTFLVRNLFYNTPARRKFLK-SPVTEAGYVE 172
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ ++ +AL HP ++FKFI + + T + + ++ +G + L ++
Sbjct: 173 QIMVHMALSHPDIAFKFI--HNSKNKMYTSGNGNVKDIIYHLYGRDVAGALLPISLKGPT 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ + GY+ P+ S + ++ +IN RY+ I+K + +F + +
Sbjct: 231 VSVDGYVGKPFISRGNRNYESYFINGRYIKSKIIYKAIEDGYKTFTMAHKY--------- 281
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P LN+ L D+ P K + F++ + + + I+
Sbjct: 282 --------PFVCLNIEVEPELLDVNVHPTKMEIRFRNEKELYELLASGIK 323
Score = 40.8 bits (94), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 28/204 (13%)
Query: 1166 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEEL----RHKVLSGEGKSVAYLDAE 1221
D KV+ Q+ K + + L ++DQHAA E++ E+L R K + +G Y+
Sbjct: 431 DRKVIGQLFKTYWLIEYEDQLFIMDQHAAHEKVNYEKLMKSFREKKIYSQGVEPPYV--- 487
Query: 1222 QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-I 1280
+ L ++L+ + ++ G+ I G F + VP +
Sbjct: 488 --VTLSMAEAKVLEETKDIFQELGF--TIEAFGGNEF--------------CIRQVPANL 529
Query: 1281 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1340
+G+ ++ +E L L DG P + + S AC+ + + E +++
Sbjct: 530 YGLKEKEL-FMELLDSLT-ADGVKKDPEMITDKIASMACKMSAKGNQRMSLPEVRNLLDL 587
Query: 1341 LKQTSLCFQCAHGRPTTVPLVNLE 1364
L + + C HGRPT + + E
Sbjct: 588 LMECENPYTCPHGRPTMIKMSKYE 611
>gi|319649470|ref|ZP_08003626.1| DNA mismatch repair protein [Bacillus sp. 2_A_57_CT2]
gi|317398632|gb|EFV79314.1| DNA mismatch repair protein [Bacillus sp. 2_A_57_CT2]
Length = 640
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 173/355 (48%), Gaps = 29/355 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I +L +A+ N + +G V+ VV+EL+ NS+DAG+T + + ++++D+
Sbjct: 1 MGKIIQLDDALSNKIAAGEVVERPASVVKELMENSIDAGSTIIEIEAEEAGLAKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI D ++ RH ATSK + D +D I T GFRGEAL SI+ VS +E+ T
Sbjct: 61 GDGIEEDDVLNAFHRH-ATSK---IKDENDLFRIRTLGFRGEALPSIASVSRIEMKTSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G R V++G K + RK GT + DLF+N P R KYM++ + L ++
Sbjct: 117 D--DGTRVVIEGGKVEVMEKAPGRK--GTDLTVTDLFFNTPARLKYMKTIHTE-LGNITD 171
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP+V+ + I +E +LL T + +L + +G+ + + A+
Sbjct: 172 VVNRLALAHPEVAIRLI--HNERKLLQTNGNGDVRQVLAAIYGLNIVKKMVRIEASSLDF 229
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ISGY + P + + + + IN R++ + K + + + L
Sbjct: 230 KISGYAAMPEITRASRNYISTMINGRFIKNYSLAKAIQ------------EGYHTLLPIG 277
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
R P LLN+ L D+ P K V + + A+++A+ K+
Sbjct: 278 R-----YPIVLLNIEMDPLLVDVNVHPSKMEVRLSKEHELNELVSDALKAAFKKE 327
>gi|410452948|ref|ZP_11306910.1| DNA mismatch repair protein [Bacillus bataviensis LMG 21833]
gi|409933693|gb|EKN70613.1| DNA mismatch repair protein [Bacillus bataviensis LMG 21833]
Length = 629
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 171/356 (48%), Gaps = 28/356 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I +L +A+ N + +G V+ VV+ELV N++DAG+T + + V +++ D+
Sbjct: 1 MGKIIQLDDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIEIEVEEAGLAKIRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RH ATSK + D +D I T GFRGEAL SI+ VS LE+ T +
Sbjct: 61 GYGIDEEDVLIAFHRH-ATSK---IKDENDLFRIRTLGFRGEALPSIASVSRLEMKT-ST 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G R V++G K R+ GT + DLF+N P R KYM++ + L ++
Sbjct: 116 GEGAGNRVVIEGGKVEVFEKASARR--GTDLTITDLFFNTPARLKYMKTIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP+V+F+ I +E +LL T + +L S +G+ L +
Sbjct: 173 VVNRLALSHPEVAFRLI--HNERKLLQTNGNGDVRQVLASIYGMAIAKQLVPIQGQSLDY 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ISG+ S P + + + + IN R++ P+ K + + + L
Sbjct: 231 KISGFASMPEVTRASRNYISTMINGRFIKNYPLAKAIQ------------EGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
R P LLN+ L D+ P K V + + I+ + KI
Sbjct: 279 R-----FPIVLLNIEMDPLLVDVNVHPSKMEVRISKEAELDELVTTIIKDTFKSKI 329
>gi|399575652|ref|ZP_10769410.1| DNA mismatch repair protein mutl [Halogranum salarium B-1]
gi|399239920|gb|EJN60846.1| DNA mismatch repair protein mutl [Halogranum salarium B-1]
Length = 756
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 169/359 (47%), Gaps = 38/359 (10%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
TI L + + +G V+ VV+ELV NS+DA A++V V V V+V DDG
Sbjct: 10 TIRALDQTTIQRIAAGEVVERPASVVKELVENSLDADASRVSVAVWNGGKDGVRVRDDGV 69
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G++ D L + + H TSK+ + D++ TG+ T GFRGEAL +IS VS + +K G
Sbjct: 70 GMTEDELAVAVDEHT-TSKISDIDDLE--TGVATLGFRGEALHTISAVSRTTVRSKPRGS 126
Query: 122 PN-GYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G ++G + + R GTT+ DLF+N P R+K++++ + H V
Sbjct: 127 AGAGAELTVEGGD-----VGEVRPAGCPAGTTIEVDDLFFNTPARKKFLKTDATEFDH-V 180
Query: 178 KKCVLRIALVHPKVSFKFIDMESED-ELLCTCSSSSPLALLISSFGIEDFSFLDEVN--- 233
V + AL +P V+ + +E D E+ T S + ++S +G E + V
Sbjct: 181 NTVVTQYALANPDVA---VSLEHNDREVFATEGQGSLESTVLSVYGREVAEAMTRVESDP 237
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
AND ISG +S P + S + + ++N RYV G + + + A
Sbjct: 238 ANDAVASISGLVSHPETTRSGREYLSTFVNGRYVTAGSLREAV------------LDAYG 285
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
G L R P +L L P + D+ P K V F D V A +E A+ SA +
Sbjct: 286 GQLAPDR-----YPFAVLFLDVPPNSVDVNVHPRKMEVRFDDESGVKAAVESAVESALL 339
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 21/194 (10%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
+VL Q+ ++ A L ++DQHAADER+ E LR ++ E EL
Sbjct: 556 RVLGQLFDTYLVAEAPDGLVLVDQHAADERVNYERLRREIRGDTPTQGLAEPVELELTAR 615
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1287
E L + +A+ + + G+ R+ + +++ +VP +F L
Sbjct: 616 EAA--LFEEYADALAELGF------DAERTDERT----------VSVRSVPAVFDAALEP 657
Query: 1288 VDLLEFLQQL--ADTDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1344
L + L A+ DG T +V +L AC +I SL ++E L
Sbjct: 658 ELLRDVLTAFVEAERDGGRETVDAVADSLLADLACHPSITGNTSLTEGSVVELLEALDAC 717
Query: 1345 SLCFQCAHGRPTTV 1358
+ C HGRP +
Sbjct: 718 ENPYACPHGRPVVI 731
>gi|372223810|ref|ZP_09502231.1| DNA mismatch repair protein MutL [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 614
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 180/372 (48%), Gaps = 32/372 (8%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAG--ATKVFVYVGVCNCYVKVVDDG 60
I LP+ V N + +G V+ VV+EL+ N++DAG A K+ V G ++VVD+G
Sbjct: 4 VIKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGADAIKLIVKDG-GKTLIQVVDNG 62
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
G+S L ERH ATSK+ D+ + T GFRGEALASI+ ++ +++ TK
Sbjct: 63 DGMSETDARLAFERH-ATSKINKAEDL---FNLNTKGFRGEALASIAAIAHVDLQTKKDD 118
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
G + GS + K GT++ ++LF+N P RR +++S ++ H +
Sbjct: 119 AEVGTAIKIAGSSIKAQEVVVTPK--GTSLAVKNLFFNIPARRNFLKSDQVELRH-ITDE 175
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
R+ALVHP +SF+F + +E S ++ FG + L V+ + ++
Sbjct: 176 FHRVALVHPNISFQFYNNGAE---YFNLPIESHRQRIVHVFGNKMNERLVPVSEDTDVVK 232
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGK 299
I G+I P + + Q+ + N+RY+ K P LNH + A+F+ G L
Sbjct: 233 IHGFICKPEFARKSRGEQFFFANNRYI-KSP---YLNHAVTAAFE---------GLL--- 276
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
KS P Y L L + D+ P KT V F D + A + AI+ + +
Sbjct: 277 --KSDTHPGYFLFLEVNPATIDINIHPTKTEVKFDDEHTLYAILRSAIKHSLGQFNVAPV 334
Query: 360 FDVDMLEDAELP 371
D + +D ++P
Sbjct: 335 LDFESNQDLDMP 346
>gi|422728630|ref|ZP_16785038.1| DNA mismatch repair protein [Enterococcus faecalis TX0012]
gi|315150784|gb|EFT94800.1| DNA mismatch repair protein [Enterococcus faecalis TX0012]
Length = 710
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|422704142|ref|ZP_16761957.1| DNA mismatch repair protein [Enterococcus faecalis TX1302]
gi|315164364|gb|EFU08381.1| DNA mismatch repair protein [Enterococcus faecalis TX1302]
Length = 710
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|91775737|ref|YP_545493.1| DNA mismatch repair protein MutL [Methylobacillus flagellatus KT]
gi|91709724|gb|ABE49652.1| DNA mismatch repair protein MutL [Methylobacillus flagellatus KT]
Length = 613
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 186/394 (47%), Gaps = 33/394 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M +I LP+ + + + +G V+ ++E++ NS+DAG+T V V + +KV D+
Sbjct: 1 MPSIKLLPDQLISQIAAGEVVERPASALKEILENSLDAGSTDVAVALQAGGIKQIKVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+RD L L RHA TSK+ L D++ + + GFRGEALASI+ +S +I +
Sbjct: 61 GGGIARDELRLALTRHA-TSKIASLEDLE---CVASLGFRGEALASIAAISRTQITSYHP 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ +R +GS I+ D GT V +DL++N P RRK++++ + H ++
Sbjct: 117 DERHAWRIASEGS--FLTDIEPAALDAGTIVDIQDLYFNTPARRKFLKTENTEFGH-CEE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDGA 238
RIAL P V+ L S+ +L F E F +LDEV A
Sbjct: 174 AFRRIALSCPDVNMLLQHNGRAVARLAAGSADKRFEDILGQEFAAEAF-YLDEVAAG--- 229
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L + G + P S + QYVY+N R+V KL++H +A L
Sbjct: 230 LRVWGMAAKPTFSRHARDTQYVYVNGRFVRD----KLISHAI--------RQAYQDVLHH 277
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
R PA++L L +L D+ P KT V F+D + V FI A+ + +
Sbjct: 278 DRH-----PAFVLFLELDPALVDVNVHPSKTEVRFRDGQSVHRFIFHALHKSLATPVGLP 332
Query: 359 SFDVDML---EDAELPLESSRFQSHQSSTHLHSS 389
+ L E A P ++ + QS+ L +S
Sbjct: 333 GSLMPGLATGEKAAAPAQAPSYPRFQSNIDLRAS 366
Score = 43.9 bits (102), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L V+D HAA ERI E+L++ + + VA Q L+LP + +Q D
Sbjct: 439 LIVVDMHAAHERIMYEKLKNAL---DASRVAM----QPLLLP-VSFQ---------ADRL 481
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVI--TLLAVPCIFGVNLSDVDLLEFLQQ-LADTDG 1302
+ + Q + + N L L I V+ T LAV I V L D D + + LAD
Sbjct: 482 EVATVEEQQALAEN-GLAQLGFDIAVLSPTTLAVRAI-PVMLKDADAVALARDVLADLRQ 539
Query: 1303 SSTTPPSVLR---VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
+ R +L + AC A+ +L E ++ +++ T QC HGRPT
Sbjct: 540 YGASRAFTERRNALLGTMACHAAVRANRTLTIPEMNALLRDMEATERSGQCNHGRPT 596
>gi|427400704|ref|ZP_18891942.1| DNA mismatch repair protein mutL [Massilia timonae CCUG 45783]
gi|425720217|gb|EKU83140.1| DNA mismatch repair protein mutL [Massilia timonae CCUG 45783]
Length = 651
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 177/363 (48%), Gaps = 38/363 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVVDDG 60
I +LP+ + + + +G V+ + VV+EL+ N++DAGAT++ V + GV + + D+G
Sbjct: 19 IQQLPDQLISQIAAGEVVERPSAVVKELLENALDAGATQITVRLEEGGVKR--IAITDNG 76
Query: 61 SGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
GI+ + L L RHA TSK+ L D+++ +GT GFRGEALASI+ V+ + I ++
Sbjct: 77 RGIAPEQLPLALARHA-TSKISSLHDLEN---VGTLGFRGEALASIASVAAVRITSRTPD 132
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
+ + V + GTT+ +DL++N P RRK+++S + H +
Sbjct: 133 AAHAWEIVGSHEGT----VAPSSGACGTTIDVQDLYFNTPARRKFLKSEQTEYGH-CAEV 187
Query: 181 VLRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V RIAL P VSF + + D + ++ +L S F E++ + G L
Sbjct: 188 VRRIALARPDVSFSLSHNGRTIDHWNVSEAAKRSAHILGSDFAEARL----ELDESAGPL 243
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ GY+ P S + Q+ Y+N R+V K+L H + A L G
Sbjct: 244 HLHGYVGLPTASKARADGQFFYVNGRFVRD----KVLVHAVRA--------AYQDVLHGD 291
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS--AWMKKIAH 357
R P+Y+L+L +L D+ P K V F+D V F+ A++ A AH
Sbjct: 292 R-----FPSYVLSLDLDPALVDVNVHPSKIEVRFRDSRAVHQFVFHAVQRTLAQTSATAH 346
Query: 358 DSF 360
S
Sbjct: 347 GSV 349
>gi|257080442|ref|ZP_05574803.1| DNA mismatch repair protein [Enterococcus faecalis E1Sol]
gi|256988472|gb|EEU75774.1| DNA mismatch repair protein [Enterococcus faecalis E1Sol]
Length = 710
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|229547408|ref|ZP_04436133.1| DNA mismatch repair protein [Enterococcus faecalis TX1322]
gi|256854834|ref|ZP_05560198.1| DNA mismatch repair protein HexB [Enterococcus faecalis T8]
gi|257417287|ref|ZP_05594281.1| MutL [Enterococcus faecalis ARO1/DG]
gi|422686956|ref|ZP_16745146.1| DNA mismatch repair protein [Enterococcus faecalis TX4000]
gi|229307440|gb|EEN73427.1| DNA mismatch repair protein [Enterococcus faecalis TX1322]
gi|256710394|gb|EEU25438.1| DNA mismatch repair protein HexB [Enterococcus faecalis T8]
gi|257159115|gb|EEU89075.1| MutL [Enterococcus faecalis ARO1/DG]
gi|315028310|gb|EFT40242.1| DNA mismatch repair protein [Enterococcus faecalis TX4000]
Length = 710
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|29377616|ref|NP_816770.1| DNA mismatch repair protein [Enterococcus faecalis V583]
gi|257418005|ref|ZP_05594999.1| DNA mismatch repair protein mutL [Enterococcus faecalis T11]
gi|307288399|ref|ZP_07568390.1| DNA mismatch repair protein [Enterococcus faecalis TX0109]
gi|422713829|ref|ZP_16770577.1| DNA mismatch repair protein [Enterococcus faecalis TX0309A]
gi|422718546|ref|ZP_16775199.1| DNA mismatch repair protein [Enterococcus faecalis TX0309B]
gi|29345083|gb|AAO82840.1| DNA mismatch repair protein HexB [Enterococcus faecalis V583]
gi|257159833|gb|EEU89793.1| DNA mismatch repair protein mutL [Enterococcus faecalis T11]
gi|306500631|gb|EFM69957.1| DNA mismatch repair protein [Enterococcus faecalis TX0109]
gi|315573187|gb|EFU85378.1| DNA mismatch repair protein [Enterococcus faecalis TX0309B]
gi|315581311|gb|EFU93502.1| DNA mismatch repair protein [Enterococcus faecalis TX0309A]
Length = 710
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|389575733|ref|ZP_10165761.1| DNA mismatch repair protein MutL [Eubacterium cellulosolvens 6]
gi|389311218|gb|EIM56151.1| DNA mismatch repair protein MutL [Eubacterium cellulosolvens 6]
Length = 772
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 175/359 (48%), Gaps = 35/359 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M +I L + + + +G V+ V++EL N++DAGAT V + + ++++ D+
Sbjct: 1 MRSIELLDKQTIDQIAAGEVVERPASVIKELTENAIDAGATAVTIEIRDGGTTFMRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G+GI D + RHA TSK+ D+ I + GFRGEAL+SIS V+ +E ITK
Sbjct: 61 GAGIPADQVKKAFLRHA-TSKIRKAEDL---VNIASLGFRGEALSSISAVAQVECITKTP 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
G R ++G G++ E +++ GTT + R+LF+N P R K+++ +P +
Sbjct: 117 EALTGIRYCIEG------GVEKEYEEIGAPGGTTFIIRNLFFNTPARAKFLK-APVTEGN 169
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
V V +AL HP++SFKFI ++ L T + + ++ FG + L V+A
Sbjct: 170 HVSSFVEELALSHPEISFKFI--QNGQNKLYTSGNGNLKEIVYQIFGRDLTRELVAVDAR 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ + G+I +P + + F+ +IN RYV I K + D++ +GF
Sbjct: 228 TELMHVHGFIGNPNVARGNRTFENYFINGRYVKNKVIAKAI---------EDAY---HGF 275
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
L + P LL L D+ P K V D E V + I++A M +
Sbjct: 276 LMQHK-----YPFTLLYLDIVSEKVDVNVHPQKLEVRISDQEGVYHQLCLTIQNALMNR 329
Score = 48.9 bits (115), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 31/186 (16%)
Query: 1185 TLAVIDQHAADERIRLEEL----RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQ 1240
+L +IDQHAA E++ E + R K + + L L L QLL++ +
Sbjct: 603 SLYIIDQHAAHEKVNYERMMKAYREKTIHSQ-----MLYPSIVLDLSRREAQLLESNLKT 657
Query: 1241 IKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLE-FLQQLAD 1299
+D G+ + + G SF N AVP NL V E F+Q LA+
Sbjct: 658 FEDLGF--EVESFGGNSFKIN--------------AVPA----NLYSVASDELFMQILAE 697
Query: 1300 TDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1358
+ P ++ L S +C+ A+ + L E +++EL + C HGRPT +
Sbjct: 698 LESLGEVSPKLIPEKLASMSCKAAVKGNNRLSVEEANALIDELLTLENPYNCPHGRPTII 757
Query: 1359 PLVNLE 1364
+ E
Sbjct: 758 SMTRYE 763
>gi|256761016|ref|ZP_05501596.1| DNA mismatch repair protein mutL [Enterococcus faecalis T3]
gi|256962999|ref|ZP_05567170.1| MutL [Enterococcus faecalis HIP11704]
gi|307273664|ref|ZP_07554892.1| DNA mismatch repair protein [Enterococcus faecalis TX0855]
gi|256682267|gb|EEU21962.1| DNA mismatch repair protein mutL [Enterococcus faecalis T3]
gi|256953495|gb|EEU70127.1| MutL [Enterococcus faecalis HIP11704]
gi|306509677|gb|EFM78719.1| DNA mismatch repair protein [Enterococcus faecalis TX0855]
Length = 710
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|429085063|ref|ZP_19148047.1| DNA mismatch repair protein MutL [Cronobacter condimenti 1330]
gi|426545903|emb|CCJ74088.1| DNA mismatch repair protein MutL [Cronobacter condimenti 1330]
Length = 632
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 173/360 (48%), Gaps = 32/360 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGA+++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIDIERGGAKLIRIRDNGGG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ L L RH ATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKEELALALARH-ATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMDVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GAL 239
RIAL V+ S+P + S I +FL++ A + G L
Sbjct: 177 RIALARFDVTINLSHNGKMMRQYRAVQGSTPRERRLGS--ICGPAFLEQALAIEWQHGDL 234
Query: 240 EISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 235 ALRGWVAEPKGTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQQ---- 285
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 286 --------PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAAN 336
>gi|256419867|ref|YP_003120520.1| DNA mismatch repair protein MutL [Chitinophaga pinensis DSM 2588]
gi|256034775|gb|ACU58319.1| DNA mismatch repair protein MutL [Chitinophaga pinensis DSM 2588]
Length = 630
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 175/359 (48%), Gaps = 44/359 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
IN LP+ + N + +G V+ V+EL+ N+VDAGAT++ + V+V+D+G G
Sbjct: 5 INLLPDNIANQIAAGEVIQRPASAVKELLENAVDAGATEIQLIIRDAGKELVQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERH ATSK + ++D I T GFRGEALASI+ VS +E+ T+ G
Sbjct: 65 MSETDARMCFERH-ATSK---IQTINDLFSIRTMGFRGEALASIAAVSQVELKTRLRGSE 120
Query: 123 NGYRKVMKGSKCLYLGIDD---ERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G Y+ ID+ +++++ GT++ ++LF+N P RR +++S+ ++
Sbjct: 121 IG----------TYIEIDNSAVKKQEMCQTAEGTSIAMKNLFFNVPARRNFLKSNAAEMR 170
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
H V + + R+A+ P++ F + + + L S +I+ G + + V
Sbjct: 171 HIVDEFI-RVAMAFPQIQFT---LTNNTQQLFYLEKGSLKQRIIAILGQHYNARIVSVKE 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
+ + G++ P + + Q+ ++N+R++ +H + + A +DS+
Sbjct: 227 TTDYMNVHGFVGKPETAKKTRGDQFFFVNNRFIKSPYLHHAIMNAFAEMIPADSF----- 281
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
P Y+L + D+ P K + F D + + AF++ A++ A +
Sbjct: 282 ------------PLYVLFIDLDPGHVDINVHPTKQEIKFDDEKLMYAFVQSAVKHALAQ 328
>gi|433448797|ref|ZP_20411662.1| DNA mismatch repair protein [Weissella ceti NC36]
gi|429539186|gb|ELA07223.1| DNA mismatch repair protein [Weissella ceti NC36]
Length = 658
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 162/336 (48%), Gaps = 44/336 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L + + N + +G V+ VV+ELV N++DA AT++ V V ++V+DD
Sbjct: 1 MGKIATLSDVLANQIAAGEVIERPASVVKELVENAIDAKATRIDVLVEAAGTDLIRVIDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ D + RH ATSK+ D+ + + GFRGEAL SI+ VS + ++T
Sbjct: 61 GQGIADDDVETAFLRH-ATSKITTRHDL---FRVHSLGFRGEALPSIASVSEVTLVTAQA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
+G + KG GI +E GT + ++LF+N P R KY++ SP L
Sbjct: 117 DSEHGSQVRYKG------GILEEHTSASGRQGTDITVKNLFFNTPARLKYLK-SPSTELA 169
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
+ + IAL HP+VS + + E++ T + + ++ S +G + + + A
Sbjct: 170 QITDVLHHIALSHPEVSLRL--RHGDKEIMRTVGNGNLQQVIASIYGTQQARKMVDFEAE 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
D +I+GY S P + + +++ V IN RYV +++ N
Sbjct: 228 DLDFKITGYTSLPELTRANRSYMAVLINGRYV-------------------KNYQLTNAI 268
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHV 331
+KG SK L+ R P ++ D+ DPL V
Sbjct: 269 IKGYGSK-------LMVGRFPIAVIDIQMDPLLVDV 297
>gi|402756313|ref|ZP_10858569.1| DNA mismatch repair protein MutL family protein [Acinetobacter sp.
NCTC 7422]
Length = 646
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 166/347 (47%), Gaps = 34/347 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDDGSG 62
I+ L A+ N + +G V+ + VV+EL+ NS+DAGAT++ + V + ++++D+G+G
Sbjct: 9 IHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIIRVAQGGSTLIEIIDNGNG 68
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I D L L RHA TSK+ DD I + GFRGEALASI+ VS L + + +
Sbjct: 69 IHPDDLSLAVMRHA-TSKI---QTADDLHAIVSLGFRGEALASIAAVSRLTLTSSQDEQG 124
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
GY+ + G+ + I GT + +DLF+N P RRK+++ P + +++ V
Sbjct: 125 VGYQVEVNGTAFDHQQIQAVAAQKGTHIRVQDLFFNVPARRKFLK-KPTTEFNHIEEIVR 183
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPL------ALLISSFGIEDFSFLDEVNAND 236
R+AL H + F ++ L + S L LL F I++ ++D + N
Sbjct: 184 RLALTHFDIRF-VLEHNDNIRLNLPVADSGELRYQRVQQLLGQQF-IQNAYWIDAESIN- 240
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ +SG++ P D+ + QYVY+N R V I L A G L
Sbjct: 241 --MRLSGWLGHPSDARAQADMQYVYVNGRIVKDKTISHALR------------MAYEGIL 286
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 343
G + S YLL L D+ P K + F + V F+
Sbjct: 287 HGHQHSS-----YLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFV 328
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 30/198 (15%)
Query: 1178 IPVVAGGT--LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQ 1235
I ++A T L ++D HAA ERI L++++ S K + Q+L++P++ + +
Sbjct: 465 IYILAQNTEGLIIVDMHAAHERILLQQMK----SAWDKPEFW--TSQQLLIPKV-VSITR 517
Query: 1236 NFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCI-----FGVNLSDVDL 1290
A +++D + Q R L + Q + + VP I FG NL +
Sbjct: 518 MQATRVED------LQPQLQR---LGLEIDQYGDEQVIVRGVPAILHKADFG-NL----V 563
Query: 1291 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1350
E L L D + +L AC GA+ L SE ++ +++QT QC
Sbjct: 564 PELLNDLDPNDEARGLLQKRDELLAGMACHGAVRAHRQLSLSEMNALLRQMEQTEFASQC 623
Query: 1351 AHGRPT--TVPLVNLEAL 1366
HGRPT PL L+ L
Sbjct: 624 NHGRPTWRAFPLNQLDKL 641
>gi|389878742|ref|YP_006372307.1| DNA mismatch repair protein MutL [Tistrella mobilis KA081020-065]
gi|388529526|gb|AFK54723.1| DNA mismatch repair protein MutL [Tistrella mobilis KA081020-065]
Length = 642
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 160/355 (45%), Gaps = 29/355 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I RLPE + N + +G V+ V+ELV N++DAGA +V V +G + V DD
Sbjct: 1 MSRIRRLPETLVNRIAAGEVVERPAAAVKELVENAIDAGARQVDVVLGAGGRSLIAVTDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ D L L ERH ATSK LAD DD I T GFRGEAL SI V+ L I ++
Sbjct: 61 GIGMDADDLELAIERH-ATSK---LAD-DDLVEIDTLGFRGEALPSIGAVARLRITSRRR 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G V++G + + GT V RDLFY P R K++++ + +V
Sbjct: 116 GADTALEIVVEGG--IRAPVKPASGPPGTRVEVRDLFYATPARLKFLKAE-RTETQAVAD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELL---CTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ R+A+ +P++ F D E + + LA L G + + E+ A
Sbjct: 173 ALRRLAMAYPEIGFSLADGERRIFAFRPETGTGAEARLARLGRIMGRDFAANALEIEAER 232
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
L + G+ P + QY+++N R V +L+ + + A FL
Sbjct: 233 DLLRLEGHAGLPTLNRGTAQHQYLFVNGRPVRD----RLMQGVVRA--------AYQDFL 280
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
R P L L P L D+ P K V F+D + V I A+R A
Sbjct: 281 ARDRH-----PMVALFLTVPARLVDVNVHPAKAEVRFRDPQLVRGLIIGALRHAL 330
Score = 43.5 bits (101), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 78/192 (40%), Gaps = 19/192 (9%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEEL-RHKVLSGEGKSVAYLDAEQELVLPE 1228
L Q+ +I L V+DQHAA ER+ E + RH +G Q L+LPE
Sbjct: 457 LAQLHDTYILAETRDGLVVVDQHAAHERLVYERMKRHMAEAGV--------PSQGLLLPE 508
Query: 1229 IGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDV 1288
+ E + D + + + L + + + VP + G +
Sbjct: 509 V-----VELDEAVAD-----GLLRRAAELGRLGLEIEAFGPGAVLVRGVPALLGRVDAQG 558
Query: 1289 DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1348
+ + ++A+ D + + V + AC G++ G L E ++ E++ T
Sbjct: 559 LVRDLGDEIAEYDEALALADRLEAVCATMACHGSVRAGRRLTIPEMNALLREMEITPHSG 618
Query: 1349 QCAHGRPTTVPL 1360
QC HGRPT V L
Sbjct: 619 QCNHGRPTWVSL 630
>gi|256958441|ref|ZP_05562612.1| MutL [Enterococcus faecalis DS5]
gi|257078247|ref|ZP_05572608.1| MutL [Enterococcus faecalis JH1]
gi|307270518|ref|ZP_07551816.1| DNA mismatch repair protein [Enterococcus faecalis TX4248]
gi|397701307|ref|YP_006539095.1| DNA mismatch repair protein mutL [Enterococcus faecalis D32]
gi|422696024|ref|ZP_16754001.1| DNA mismatch repair protein [Enterococcus faecalis TX4244]
gi|422711204|ref|ZP_16768137.1| DNA mismatch repair protein [Enterococcus faecalis TX0027]
gi|256948937|gb|EEU65569.1| MutL [Enterococcus faecalis DS5]
gi|256986277|gb|EEU73579.1| MutL [Enterococcus faecalis JH1]
gi|306513099|gb|EFM81733.1| DNA mismatch repair protein [Enterococcus faecalis TX4248]
gi|315034869|gb|EFT46801.1| DNA mismatch repair protein [Enterococcus faecalis TX0027]
gi|315146538|gb|EFT90554.1| DNA mismatch repair protein [Enterococcus faecalis TX4244]
gi|397337946|gb|AFO45618.1| DNA mismatch repair protein mutL [Enterococcus faecalis D32]
Length = 710
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|397166355|ref|ZP_10489800.1| DNA mismatch repair protein mutL [Enterobacter radicincitans DSM
16656]
gi|396092110|gb|EJI89675.1| DNA mismatch repair protein mutL [Enterobacter radicincitans DSM
16656]
Length = 619
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 176/358 (49%), Gaps = 32/358 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + +
Sbjct: 119 EAWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVIR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLD---EVNANDGA 238
RIAL V+ I++ +++ + + A G I +FL+ E+ G
Sbjct: 177 RIALARFDVT---INLNHNGKMVRQYRAVAEGAPKERRLGAICGSAFLEQALEIAWQHGD 233
Query: 239 LEISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
L + G+++ P + + A QY Y+N R + +L+NH A C D A+
Sbjct: 234 LSLHGWVADPKSTSNAFAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGADQQ--- 285
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
PA++L L+ D+ P K V F V FI + + S +++
Sbjct: 286 ---------PAFVLYLKIDPRQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL 334
>gi|384514398|ref|YP_005709491.1| DNA mismatch repair protein HexB [Enterococcus faecalis OG1RF]
gi|430361211|ref|ZP_19426551.1| DNA mismatch repair protein [Enterococcus faecalis OG1X]
gi|430372319|ref|ZP_19429706.1| DNA mismatch repair protein [Enterococcus faecalis M7]
gi|327536287|gb|AEA95121.1| DNA mismatch repair protein HexB [Enterococcus faecalis OG1RF]
gi|429512559|gb|ELA02163.1| DNA mismatch repair protein [Enterococcus faecalis OG1X]
gi|429514663|gb|ELA04200.1| DNA mismatch repair protein [Enterococcus faecalis M7]
Length = 710
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|229547981|ref|ZP_04436706.1| DNA mismatch repair protein [Enterococcus faecalis ATCC 29200]
gi|257091401|ref|ZP_05585762.1| DNA mismatch repair protein mutL [Enterococcus faecalis CH188]
gi|312905469|ref|ZP_07764583.1| DNA mismatch repair protein [Enterococcus faecalis TX0635]
gi|422689909|ref|ZP_16747999.1| DNA mismatch repair protein [Enterococcus faecalis TX0630]
gi|422732766|ref|ZP_16789095.1| DNA mismatch repair protein [Enterococcus faecalis TX0645]
gi|229306857|gb|EEN72853.1| DNA mismatch repair protein [Enterococcus faecalis ATCC 29200]
gi|257000213|gb|EEU86733.1| DNA mismatch repair protein mutL [Enterococcus faecalis CH188]
gi|310631198|gb|EFQ14481.1| DNA mismatch repair protein [Enterococcus faecalis TX0635]
gi|315161300|gb|EFU05317.1| DNA mismatch repair protein [Enterococcus faecalis TX0645]
gi|315577077|gb|EFU89268.1| DNA mismatch repair protein [Enterococcus faecalis TX0630]
Length = 710
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|113968940|ref|YP_732733.1| DNA mismatch repair protein [Shewanella sp. MR-4]
gi|123029966|sp|Q0HMP1.1|MUTL_SHESM RecName: Full=DNA mismatch repair protein MutL
gi|113883624|gb|ABI37676.1| DNA mismatch repair protein MutL [Shewanella sp. MR-4]
Length = 644
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 172/356 (48%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +K+ D+
Sbjct: 1 MG-IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDN 59
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI +D L L RHA TSKL L DD I +FGFRGEALASIS VS L + ++
Sbjct: 60 GSGIPKDELALALSRHA-TSKLHSL---DDLEAILSFGFRGEALASISSVSRLTLTSRTA 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ ++ +G + + + VG+T+ DLF+N P RR++++S + H + +
Sbjct: 116 EQTEAWQAYAEGVD-MAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTH-IDE 173
Query: 180 CVLRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNAN 235
+ RIALV + F + ++ + L L G + F DE V
Sbjct: 174 WLKRIALVRGDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQVAGRQ---FADEALRVECQ 230
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
L +SGY+ SP+ ++ + Y Y+N R V +L+NH F
Sbjct: 231 HDDLRLSGYLQSPWSTV-LTDTHYFYVNGRLVRD----RLVNH-----------AVRQAF 274
Query: 296 LKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
+ + P Y+L L PH + D+ P K V F V +I +A++SA
Sbjct: 275 AQKAEVEQ---PGYVLMLDIDPHQV-DVNVHPAKHEVRFHQSRYVHDYILQALQSA 326
>gi|329957333|ref|ZP_08297853.1| DNA mismatch repair protein [Bacteroides clarus YIT 12056]
gi|328523046|gb|EGF50149.1| DNA mismatch repair protein [Bacteroides clarus YIT 12056]
Length = 631
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 186/384 (48%), Gaps = 47/384 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A ++ V + ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAGEIHVLITDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHA-TSKIREASDL---FALRTMGFRGEALASIAAVAEVELKTRPADEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G R V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 121 LGTRLVIAGSKV------ESQEAVSCPKGSNFSVKNLFFNIPARRKFLKANSTE-LSNIL 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIALVHP V+F + S D L +++ FG + L V+ +
Sbjct: 174 TEFERIALVHPDVAFY---LYSNDTELFNLPVMPLRQRILAVFGKKLNQQLLSVDVDTTM 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+++SG+++ P S A QY ++N RY+ HK + D+++
Sbjct: 231 IKVSGFVAKPETSRKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE-------- 273
Query: 299 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
Q PA Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 -----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGK 328
Query: 354 KIAHDSFDVDMLEDAELP-LESSR 376
A S D D ++P E SR
Sbjct: 329 FNAVPSIDFDTEGMPDIPAFEQSR 352
>gi|300861473|ref|ZP_07107557.1| DNA mismatch repair protein, C-terminal domain protein
[Enterococcus faecalis TUSoD Ef11]
gi|422740016|ref|ZP_16795173.1| DNA mismatch repair protein [Enterococcus faecalis TX2141]
gi|428768271|ref|YP_007154382.1| DNA mismatch repair protein [Enterococcus faecalis str. Symbioflor
1]
gi|295114466|emb|CBL33103.1| DNA mismatch repair protein MutL [Enterococcus sp. 7L76]
gi|300848934|gb|EFK76687.1| DNA mismatch repair protein, C-terminal domain protein
[Enterococcus faecalis TUSoD Ef11]
gi|315144209|gb|EFT88225.1| DNA mismatch repair protein [Enterococcus faecalis TX2141]
gi|427186444|emb|CCO73668.1| DNA mismatch repair protein [Enterococcus faecalis str. Symbioflor
1]
Length = 710
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|312902027|ref|ZP_07761289.1| DNA mismatch repair protein [Enterococcus faecalis TX0470]
gi|311290963|gb|EFQ69519.1| DNA mismatch repair protein [Enterococcus faecalis TX0470]
Length = 710
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|422698553|ref|ZP_16756445.1| DNA mismatch repair protein [Enterococcus faecalis TX1346]
gi|315172873|gb|EFU16890.1| DNA mismatch repair protein [Enterococcus faecalis TX1346]
Length = 710
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|294779166|ref|ZP_06744576.1| DNA mismatch repair protein, C-terminal domain protein
[Enterococcus faecalis PC1.1]
gi|294453799|gb|EFG22191.1| DNA mismatch repair protein, C-terminal domain protein
[Enterococcus faecalis PC1.1]
Length = 710
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|358063955|ref|ZP_09150551.1| hypothetical protein HMPREF9473_02614 [Clostridium hathewayi
WAL-18680]
gi|356697824|gb|EHI59388.1| hypothetical protein HMPREF9473_02614 [Clostridium hathewayi
WAL-18680]
Length = 740
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 167/355 (47%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I L E N + +G V+ VV+EL+ N++DA AT V V + ++V D+
Sbjct: 1 MPRITVLDEHTINKIAAGEVIERPASVVKELLENAIDAQATAVTVEIRDGGTSLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI +D + L HA TSK+ ++D + + GFRGEALASI+ V+ +E+I+K
Sbjct: 61 GCGIPKDEVGLAFLPHA-TSKI---KSVEDLFTVASLGFRGEALASIAAVAQVELISKTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R ++G K I++ GTT + R+LFYN P R+ +++++ + + V
Sbjct: 117 DALTGTRYQIEGGK--EKSIEEIGAPEGTTFLVRNLFYNTPARKNFLKTAQTEGAY-VAD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +IAL HP +S +FI ++ L T + + ++ + FG E + L V L
Sbjct: 174 LVEKIALSHPDISIRFI--QNNQNKLHTSGNHNLKDIIYTVFGREIAANLLPVEVKQDIL 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+I G+ P + + ++ YIN RY+ + K + F +
Sbjct: 232 QIRGFAGKPVIARGNRNYENYYINGRYIKSNVVAKAIEEAYKPFMMQHKY---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P LL+L D+ P K + F++ E + I +A+ A K
Sbjct: 282 -------PFTLLHLTIEPEYLDVNVHPTKMELRFREGERIYRMIYQAVSDALAHK 329
>gi|255970642|ref|ZP_05421228.1| DNA mismatch repair protein mutL [Enterococcus faecalis T1]
gi|257088270|ref|ZP_05582631.1| MutL [Enterococcus faecalis D6]
gi|307276608|ref|ZP_07557726.1| DNA mismatch repair protein [Enterococcus faecalis TX2134]
gi|312953267|ref|ZP_07772112.1| DNA mismatch repair protein [Enterococcus faecalis TX0102]
gi|384516962|ref|YP_005704267.1| DNA mismatch repair protein mutL [Enterococcus faecalis 62]
gi|422692478|ref|ZP_16750499.1| DNA mismatch repair protein [Enterococcus faecalis TX0031]
gi|422723502|ref|ZP_16780037.1| DNA mismatch repair protein [Enterococcus faecalis TX2137]
gi|255961660|gb|EET94136.1| DNA mismatch repair protein mutL [Enterococcus faecalis T1]
gi|256996300|gb|EEU83602.1| MutL [Enterococcus faecalis D6]
gi|306506718|gb|EFM75870.1| DNA mismatch repair protein [Enterococcus faecalis TX2134]
gi|310628804|gb|EFQ12087.1| DNA mismatch repair protein [Enterococcus faecalis TX0102]
gi|315026535|gb|EFT38467.1| DNA mismatch repair protein [Enterococcus faecalis TX2137]
gi|315152837|gb|EFT96853.1| DNA mismatch repair protein [Enterococcus faecalis TX0031]
gi|323479095|gb|ADX78534.1| DNA mismatch repair protein mutL [Enterococcus faecalis 62]
Length = 710
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|390453603|ref|ZP_10239131.1| DNA mismatch repair protein mutL [Paenibacillus peoriae KCTC 3763]
Length = 739
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 170/356 (47%), Gaps = 27/356 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I L E + N + +G V+ + VV+ELV N++DAG T+V V V ++V D+
Sbjct: 1 MSKIRVLDEHIANQIAAGEVVERPSSVVKELVENAIDAGGTRVDVSVEEGGLQSIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI + + RH ATSK+GH D+ T + GFRGEAL SI+ VS +E++T A
Sbjct: 61 GSGIEPEDVETAFYRH-ATSKIGHGRDLFQIT---SLGFRGEALPSIAAVSKVELLTAAG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ +++G K + +D GT R+LFYN P R KYM++ ++ H +
Sbjct: 117 DDGRARKLIIEGGKLMLH--EDAAARQGTDFTVRELFYNTPARLKYMKTIQTELGH-ISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL HP+V+F + + LL T + L ++ + +G + +
Sbjct: 174 VLYRMALSHPEVAFTL--RHNGNTLLQTLGNGDLLQVIAAIYGTSAAKSMLPLEGESLDY 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
ISG++S P + S + +N R+V +++ L KA + L
Sbjct: 232 RISGFVSRPEWTRSNRNAISTVVNGRFVRSYGLNQAL------------LKAYHTLLPIN 279
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
R P ++ L SL D+ P K V F + +E +I++ +++
Sbjct: 280 R-----FPLAVIQLEMHPSLVDVNVHPAKLEVRFSKEAELFQLVEDSIKAVLGQQV 330
>gi|336451941|ref|ZP_08622375.1| DNA mismatch repair protein MutL [Idiomarina sp. A28L]
gi|336281274|gb|EGN74557.1| DNA mismatch repair protein MutL [Idiomarina sp. A28L]
Length = 657
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 171/357 (47%), Gaps = 35/357 (9%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGS 61
I LP + N + +G V+ VV+ELV N +DAGAT++ + + +++ D+G+
Sbjct: 2 AIRLLPPQLANQIAAGEVVERPASVVKELVENCIDAGATELRIDIEKGGARRIRIRDNGA 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI ++ L L RHA TSK+ L DD I + GFRGEALASIS VS L +I+K +
Sbjct: 62 GIPKEELELALSRHA-TSKISTL---DDLEAIHSLGFRGEALASISSVSRLRLISKPADQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ ++ +G + + + ++ GTTV +DLF+N P RRK++++ + H + + +
Sbjct: 118 EDAWQAWCEG-RDMQVTLEPASHPNGTTVDVQDLFFNTPARRKFLRTEKTEFGH-IDEVI 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSF-GIEDFSFLDEV-------N 233
RIAL PKV I + +LL S+ ++S I F DE
Sbjct: 176 RRIALACPKVD---IQLSHNQQLLRHYPSADTEHKVLSRLRQIAGKRFADEALYIEFVPE 232
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
A+ L I G+I+ P QY+Y+N R + KLLNH +A
Sbjct: 233 ADAHPLAIRGWIAPPDACRHQTDVQYMYVNGRMMKD----KLLNHAVR--------QAYG 280
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
L R + Y+L + P + D+ P K V F+ V F+ +R A
Sbjct: 281 DSLGNDRQAT-----YILYITLPANDVDVNVHPAKHEVRFQQARQVHDFVLMQLRQA 332
>gi|424673544|ref|ZP_18110485.1| DNA mismatch repair protein [Enterococcus faecalis 599]
gi|402352227|gb|EJU87080.1| DNA mismatch repair protein [Enterococcus faecalis 599]
Length = 710
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|294672827|ref|YP_003573443.1| DNA mismatch repair protein MutL [Prevotella ruminicola 23]
gi|294471669|gb|ADE81058.1| DNA mismatch repair protein MutL [Prevotella ruminicola 23]
Length = 612
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 186/406 (45%), Gaps = 41/406 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDD 59
M I+ LP++V N + +G V+ V++ELV NSVDAGA + + V ++V+DD
Sbjct: 1 MDLIHLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGAKTIHVIVVDAGRTSIQVIDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S L ERH ATSK ++ DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 61 GKGMSETDARLAFERH-ATSK---ISQADDLFALHTMGFRGEALASIAAVAQVELQTRRQ 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G + + GSK R++ VG+ +LF+N P RRK+++++ + L
Sbjct: 117 EDEIGTKVSIAGSKV-------TRQEPVSCPVGSNFKVDNLFFNVPARRKFLKTNATE-L 168
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
+++ RI LV+P + F + E + + S + FG + L V
Sbjct: 169 NNILTAFERIVLVYPDIHFTLHNNGVE---MLNLRAGSVRQRIADVFGKQYNQDLVPVEV 225
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
+ +SG++ P + Y ++N R++ HK + KA +
Sbjct: 226 HTAMCTVSGFVGKPEAARKKTGCDYFFVNGRFMKHPYFHKAV------------MKAYDR 273
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
+ + A P Y L + D+ P KT + F++ + + + A+R K
Sbjct: 274 LV----PEGMAVP-YFLYIEVEPGEIDVNIHPTKTEIKFENEQAIWQILSAAVRDGIGKY 328
Query: 355 IAHDSFDVDMLEDAELPL---ESSRFQSHQSSTHLHSSPLKNLAKQ 397
S D D ++PL S+ FQ ++ ++ +P N KQ
Sbjct: 329 CEVPSIDFDTQGQPDIPLFDSNSNTFQDSFAAPKVNYNPDYNPFKQ 374
>gi|227517231|ref|ZP_03947280.1| DNA mismatch repair protein [Enterococcus faecalis TX0104]
gi|424677415|ref|ZP_18114267.1| DNA mismatch repair protein [Enterococcus faecalis ERV103]
gi|424680969|ref|ZP_18117765.1| DNA mismatch repair protein [Enterococcus faecalis ERV116]
gi|424685218|ref|ZP_18121918.1| DNA mismatch repair protein [Enterococcus faecalis ERV129]
gi|424688663|ref|ZP_18125268.1| DNA mismatch repair protein [Enterococcus faecalis ERV25]
gi|424690636|ref|ZP_18127168.1| DNA mismatch repair protein [Enterococcus faecalis ERV31]
gi|424694371|ref|ZP_18130774.1| DNA mismatch repair protein [Enterococcus faecalis ERV37]
gi|424697901|ref|ZP_18134213.1| DNA mismatch repair protein [Enterococcus faecalis ERV41]
gi|424701455|ref|ZP_18137627.1| DNA mismatch repair protein [Enterococcus faecalis ERV62]
gi|424704594|ref|ZP_18140689.1| DNA mismatch repair protein [Enterococcus faecalis ERV63]
gi|424711723|ref|ZP_18143935.1| DNA mismatch repair protein [Enterococcus faecalis ERV65]
gi|424716501|ref|ZP_18145812.1| DNA mismatch repair protein [Enterococcus faecalis ERV68]
gi|424722017|ref|ZP_18151084.1| DNA mismatch repair protein [Enterococcus faecalis ERV72]
gi|424724665|ref|ZP_18153603.1| DNA mismatch repair protein [Enterococcus faecalis ERV73]
gi|424727626|ref|ZP_18156255.1| DNA mismatch repair protein [Enterococcus faecalis ERV81]
gi|424744429|ref|ZP_18172723.1| DNA mismatch repair protein [Enterococcus faecalis ERV85]
gi|424753843|ref|ZP_18181772.1| DNA mismatch repair protein [Enterococcus faecalis ERV93]
gi|227075328|gb|EEI13291.1| DNA mismatch repair protein [Enterococcus faecalis TX0104]
gi|402352356|gb|EJU87207.1| DNA mismatch repair protein [Enterococcus faecalis ERV116]
gi|402354447|gb|EJU89254.1| DNA mismatch repair protein [Enterococcus faecalis ERV103]
gi|402359199|gb|EJU93841.1| DNA mismatch repair protein [Enterococcus faecalis ERV129]
gi|402360005|gb|EJU94620.1| DNA mismatch repair protein [Enterococcus faecalis ERV25]
gi|402363663|gb|EJU98129.1| DNA mismatch repair protein [Enterococcus faecalis ERV31]
gi|402370865|gb|EJV05052.1| DNA mismatch repair protein [Enterococcus faecalis ERV37]
gi|402371486|gb|EJV05643.1| DNA mismatch repair protein [Enterococcus faecalis ERV62]
gi|402374286|gb|EJV08318.1| DNA mismatch repair protein [Enterococcus faecalis ERV41]
gi|402381616|gb|EJV15319.1| DNA mismatch repair protein [Enterococcus faecalis ERV63]
gi|402382933|gb|EJV16559.1| DNA mismatch repair protein [Enterococcus faecalis ERV65]
gi|402387908|gb|EJV21365.1| DNA mismatch repair protein [Enterococcus faecalis ERV68]
gi|402389931|gb|EJV23306.1| DNA mismatch repair protein [Enterococcus faecalis ERV72]
gi|402394085|gb|EJV27281.1| DNA mismatch repair protein [Enterococcus faecalis ERV73]
gi|402396096|gb|EJV29170.1| DNA mismatch repair protein [Enterococcus faecalis ERV81]
gi|402398964|gb|EJV31866.1| DNA mismatch repair protein [Enterococcus faecalis ERV85]
gi|402403512|gb|EJV36178.1| DNA mismatch repair protein [Enterococcus faecalis ERV93]
Length = 710
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|395240976|ref|ZP_10417998.1| DNA mismatch repair protein mutL [Lactobacillus gigeriorum CRBIP
24.85]
gi|394475484|emb|CCI87975.1| DNA mismatch repair protein mutL [Lactobacillus gigeriorum CRBIP
24.85]
Length = 630
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 175/366 (47%), Gaps = 38/366 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+EL+ NS+DAGA+++ F G+ V+
Sbjct: 1 MAKIHELSETLTNQIAAGEVIERPASVVKELIENSIDAGASRIRIDFTEAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+GSGI D + L RHA TSK+ + D+ + T GFRGEALASI+ VS +EI+T+
Sbjct: 59 DNGSGIEADQIDLAFMRHA-TSKINNERDL---FRVATLGFRGEALASIAAVSQVEILTR 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
A G + G K L +D GT ++ +LF+N P R KY++ SP+ + +
Sbjct: 115 ASGVKGTRAEFSGGQKKLQ---EDAAAQKGTQIIVNNLFFNTPARLKYLR-SPRTEMTKI 170
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
V R+AL + K++F + + L T + + + + +G + + +
Sbjct: 171 IDIVNRVALGYSKIAFTLTN--NGKVLFRTAGNGNLQQTVANIYGRPVAEKMLPIKMENA 228
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+I+G IS P + S + F + +N RY+ +++ N +
Sbjct: 229 DFKINGLISRPELTRSTRNFISILLNGRYIR-------------------NYQLNAAIMD 269
Query: 298 GKRSK--SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
G +K S+ P ++ ++ L D+ P K V + + I +AI A M+K
Sbjct: 270 GYANKMDSRHYPVAVIAIKVDPFLVDVNVHPTKQEVRLSKEKELGRLISQAISEAIMEK- 328
Query: 356 AHDSFD 361
DS +
Sbjct: 329 -QDSLN 333
>gi|260599482|ref|YP_003212053.1| DNA mismatch repair protein [Cronobacter turicensis z3032]
gi|260218659|emb|CBA33989.1| DNA mismatch repair protein mutL [Cronobacter turicensis z3032]
Length = 634
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 172/360 (47%), Gaps = 32/360 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGGG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RH ATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARH-ATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQH 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA---NDGAL 239
RIAL V+ ++P + S I +FL++ A G L
Sbjct: 177 RIALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEQALAIEWQHGDL 234
Query: 240 EISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 235 ALHGWVAEPKATTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQQ---- 285
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 286 --------PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAAN 336
>gi|209966848|ref|YP_002299763.1| DNA mismatch repair protein MutL [Rhodospirillum centenum SW]
gi|209960314|gb|ACJ00951.1| DNA mismatch repair protein MutL, putative [Rhodospirillum centenum
SW]
Length = 617
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 164/358 (45%), Gaps = 31/358 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M T+ RLPE + N + +G V+ V+ELV N++DAGA+++ V + + V DD
Sbjct: 1 MPTLRRLPERLVNRIAAGEVVERPAAAVKELVENALDAGASRIEVVLRDGGKALIGVADD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + L L ERHA TSKL DD T I T GFRGEAL SI VS L I ++
Sbjct: 61 GCGMAPEELELAVERHA-TSKLPD----DDLTHIRTLGFRGEALPSIGAVSRLSITSRPR 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + + +++G + +GT + RDLFY P R K+++ + + H+ +
Sbjct: 116 GADSAHAILVEGGA--KGPVMPAAGGIGTRIEVRDLFYATPARLKFLKGNRTESEHA-RD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSS----SPLALLISSFGIEDFSFLDEVNAN 235
V R+A+ HP V+F D E L ++ + L L + G E V+A
Sbjct: 173 AVERLAMAHPHVTFLLTD-EGRTPLRLPAATGDLMEARLVRLGAVLGREFQENALPVDAA 231
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
G + + G+I P + A QY+++N R V + + A F D
Sbjct: 232 RGPVRLVGHIGLPTLNRPTAAGQYLFVNGRPVKDRLLVGAVRGAYADFLARDRH------ 285
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
P L L P D+ P KT V F+D V I A++ A +
Sbjct: 286 -----------PMLALFLELPPEEVDVNVHPAKTEVRFRDQALVRGLIVGALKHALAQ 332
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 32/183 (17%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI------GYQLLQNFAE 1239
+ ++DQHAA ER+ E ++H +L+G K Q L++PE+ + L A
Sbjct: 447 IVIVDQHAAHERLVYERMKHDLLAGGVK-------RQGLLIPEVVELDPADAERLGERAA 499
Query: 1240 QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL--EFLQQL 1297
++ + G + G + + VP + G +DV L + +L
Sbjct: 500 ELAELGLVLEPFGTGC----------------VVVREVPALLGAR-ADVRGLVRDLADEL 542
Query: 1298 ADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT 1357
A+ + + V + AC G++ G + E ++ +++ T QC HGRPT
Sbjct: 543 AELGDALALKERLEAVCSRMACHGSVRAGRPMNADEMNALLRQMEATPHSGQCNHGRPTY 602
Query: 1358 VPL 1360
V L
Sbjct: 603 VEL 605
>gi|256618084|ref|ZP_05474930.1| MutL [Enterococcus faecalis ATCC 4200]
gi|422720898|ref|ZP_16777505.1| DNA mismatch repair protein [Enterococcus faecalis TX0017]
gi|256597611|gb|EEU16787.1| MutL [Enterococcus faecalis ATCC 4200]
gi|315031847|gb|EFT43779.1| DNA mismatch repair protein [Enterococcus faecalis TX0017]
Length = 710
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|406672777|ref|ZP_11080002.1| DNA mismatch repair protein MutL [Bergeyella zoohelcum CCUG 30536]
gi|405587321|gb|EKB61049.1| DNA mismatch repair protein MutL [Bergeyella zoohelcum CCUG 30536]
Length = 593
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 191/390 (48%), Gaps = 34/390 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ +V+EL+ N++DAGATKV + V V+VVD+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASIVKELMENAIDAGATKVELIVREAGRNLVQVVDNGIG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERH ATSK + +D I + GFRGEALASI+ VS +E+ TK
Sbjct: 65 MSETDARMAFERH-ATSK---IRTTEDIFKIMSKGFRGEALASIAAVSQVELKTKKQDAD 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++G + + + GT++ ++LFYN P RRK+++++ + H + +
Sbjct: 121 IGTNIYIEGGMLQFQ--EPIQTTTGTSIAVKNLFYNVPARRKFLKNNNVEFRHILDEFQ- 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL H ++ F D+ D + S L ++ FG + L + + G +++
Sbjct: 178 RVALAHEQIEF---DLFHNDAPIFRLRKGSSLQRIVDIFGRKLQPLLIPLKEDLGWIKLQ 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+++ P + + Q+ ++N R+ ++K + +A G L
Sbjct: 235 GFVAKPEGAKKTRGEQFFFVNGRFFKSPYLNKAVQ------------EAFEGLL-----M 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-RSAWMKKIAHDSFD 361
P++ L L D+ P KT + F+D + A I I RS + IA S D
Sbjct: 278 PGYTPSFFLFLETEPEKIDVNVHPQKTEIKFEDEHLIFALIRSTIKRSLGIYNIA-PSLD 336
Query: 362 VDMLED-AELPLESSRFQSHQSSTHLHSSP 390
D D E+ ++SS+ S+ SS + H++P
Sbjct: 337 FDRNPDFEEMIIQSSK--SNASSGN-HTAP 363
>gi|392573585|gb|EIW66724.1| hypothetical protein TREMEDRAFT_34488 [Tremella mesenterica DSM
1558]
Length = 788
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 204/419 (48%), Gaps = 45/419 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGV--CNCYVKVVDDGS 61
I+ LP + +RS ++ L +++ EL+ NS+DA A + V + + + ++V DDG
Sbjct: 12 ISPLPRSTSTQIRSSLIIPTLPQILSELIQNSLDASAKSLVVRICLEDGDQSLRVEDDGC 71
Query: 62 GISRDGLVLLGERHAAT-SKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 120
GI L +G R + S GH A G +GFRGEALASI+ + LLE+ T+
Sbjct: 72 GIPLQQLTQVGRRFVTSKSTTGHHA--------GHYGFRGEALASIAALGLLEVYTRPEN 123
Query: 121 RPNGYRKVMKGSKCLYLGIDDE-RKDVGTTVVSRDLFYNQPVRR-KYMQSSPKKVLHSVK 178
Y K++KGSK L+ G+ + GTTV+ +D+F+ PVR+ SS L + +
Sbjct: 124 DSRTYAKIIKGSKILFHGLSNRPLGKAGTTVIVKDIFHGIPVRQAALAASSRSSTLSACR 183
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSF---------- 228
K + +AL H VS+ ED + T SSSS + +SS +F
Sbjct: 184 KVIETLALAHSSVSWTVW----EDRDVETSSSSSKKIMTMSSHDASLATFKELYGGALVE 239
Query: 229 --LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIH-----KLLNHLAA 281
+ ++ + G + + G+IS + S + Q++Y+N V + +H K + +
Sbjct: 240 QRVQKIRVSSGFMRVDGFIS--LEGASGRVHQHLYVNHYPVQRSELHLAISQKFSHSRFS 297
Query: 282 SFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLA 341
+ + + ++ + + K P Y+L++ P D+ ++P K + +KD E V A
Sbjct: 298 AMNQDEPFELTHSDSRRSPRKLDKHPVYVLDVCIPAEDVDVQYEPKKGLLGYKDLEKVKA 357
Query: 342 FIERAIRSAWMKKIAHDSF----DVDMLED-AELPLESSRFQSHQSSTHLHSSPLKNLA 395
F+ A+ ++K+ HD + L D + PL +S S+T + SP+++L+
Sbjct: 358 FV-LAVVDEFLKR--HDFLVQHTKTNTLHDSSSTPLARLHERSASSATQI-LSPMQSLS 412
Score = 83.2 bits (204), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 112/240 (46%), Gaps = 45/240 (18%)
Query: 1163 CLEDAKVLQQVDKKFI----PV-----VAGGTLAVIDQHAADERIRLEELRHKVLSGEGK 1213
L+ A VL QVD KFI P ++ + ++DQHAADER+ +E L H + G K
Sbjct: 533 VLKSATVLGQVDDKFICCVLPTEEAAPISSRIVVLVDQHAADERVSVEFLLHDLCVGFMK 592
Query: 1214 SVAYLDAEQE----LVLPEIGYQLLQNFAEQI-KDWG----------------WI-CNIH 1251
+ + ++ ++ E QL + A I + WG W+ C+I
Sbjct: 593 NDIPITRPKDDLGFVISREEAQQLSRTVARDIFRRWGIDLCLPDSKLDWTTVDWVQCHI- 651
Query: 1252 TQGSRSFNKNLNLLQR----QITVITLLAVPCIFGVNLSDVD-LLEFLQQLADTDGSST- 1305
R++ L L R ++ + L +P + L ++ +L + D D
Sbjct: 652 ----RAYPSILPRLGRKDGQEMARLVKLYLPVVLD-GLGEISTMLGSINDHRDIDQGRIL 706
Query: 1306 --TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
P +L ++NSKACR AIMF D L +C +V +L +T F CAHGRP+ VP+V L
Sbjct: 707 RWMPQEMLELVNSKACRSAIMFQDKLDQEQCVRLVAQLAETRNPFSCAHGRPSLVPIVML 766
>gi|422736092|ref|ZP_16792357.1| DNA mismatch repair protein [Enterococcus faecalis TX1341]
gi|315167037|gb|EFU11054.1| DNA mismatch repair protein [Enterococcus faecalis TX1341]
Length = 710
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|238927478|ref|ZP_04659238.1| DNA mismatch repair protein MutL [Selenomonas flueggei ATCC 43531]
gi|238884760|gb|EEQ48398.1| DNA mismatch repair protein MutL [Selenomonas flueggei ATCC 43531]
Length = 622
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 174/354 (49%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L +A N + +G V+ VV+ELV N++DAGAT V V + G +++V D+
Sbjct: 1 MTRIHVLDDATINKIAAGEVVERPASVVKELVENAMDAGATAVEVEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + RH ATSK+ +D++ I T GFRGEAL +I+ VS ++T+
Sbjct: 61 GRGMTGEDARAAILRH-ATSKIAAASDLET---IATLGFRGEALPTIASVSHFSLLTRQA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G I+D VGT+V DLF+N P R+K+++++ + +
Sbjct: 117 ADDLGTRVDISGGGTPM--IEDAGCAVGTSVRVEDLFFNTPARKKFLKTNATEA-GKISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
V+R+AL P ++F+FI+ + + + LA I S +G + S L ++ D A
Sbjct: 174 YVIRLALSRPDIAFRFIN---NNRMTIMTAGDGDLARTIGSIYGGDAASALIPLDFYDDA 230
Query: 239 --LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ I+GYIS P S +A+Q +N R + I K ++++ S GF
Sbjct: 231 ADIRITGYISKPSLIRSSRAWQTYIVNGRTIQNRAIAKAIDNV------YRSLVPKMGF- 283
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P ++ + P D+ P KT + F+D + + +A+ A
Sbjct: 284 ----------PLAVIVITVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKAVLDA 327
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 79/204 (38%), Gaps = 50/204 (24%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1216
+ QVD +I + TL +IDQHAA ERI + L H +LS +
Sbjct: 436 IGQVDLTYIIAQSTATLYIIDQHAAHERILFDRFSAQTDGIPSQQMLVHAILSFDAHEAQ 495
Query: 1217 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
Y++ EL +G+ L G R++ L
Sbjct: 496 YIEENAEL-FDRLGFHL-----------------EAAGERTYR--------------LTE 523
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKACRGAIMFGDSLLPSEC 1334
P ++ + E L L D T P+ LR + + ACR AI G+ L +
Sbjct: 524 TPADVPTEEAEGIIREILASLGDL---HTATPANLREAGIATMACRAAIKAGEELSIRQM 580
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTV 1358
+++ EL+ T F C HGRPT +
Sbjct: 581 EILLAELRATPFPFTCPHGRPTIL 604
>gi|423126980|ref|ZP_17114659.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5250]
gi|376395839|gb|EHT08484.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5250]
Length = 626
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 182/375 (48%), Gaps = 39/375 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVARLTLTSRTEDQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEIVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDEVNAND---GA 238
RIAL V+ I++ +++ + S G I FL+ A + G
Sbjct: 177 RIALARFDVT---INLSHNGKVVRQYRAVSQDGQRERRLGAICGIPFLEHALAIEWQHGD 233
Query: 239 LEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
L +SG+++ P + + ++ QY Y+N R + +L+NH A C D A+
Sbjct: 234 LTLSGWVADPLHTNPTLAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGADQQ--- 285
Query: 298 GKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
PA++L L+ PH + D+ P K V F V FI + + S +
Sbjct: 286 ---------PAFVLYLKIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVLS-----VL 330
Query: 357 HDSFDVDMLEDAELP 371
DV + E+ + P
Sbjct: 331 QQQLDVPLAEEGDEP 345
>gi|257420393|ref|ZP_05597383.1| DNA mismatch repair protein hexB [Enterococcus faecalis X98]
gi|422708063|ref|ZP_16765597.1| DNA mismatch repair protein [Enterococcus faecalis TX0043]
gi|257162217|gb|EEU92177.1| DNA mismatch repair protein hexB [Enterococcus faecalis X98]
gi|315154584|gb|EFT98600.1| DNA mismatch repair protein [Enterococcus faecalis TX0043]
Length = 710
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|256960506|ref|ZP_05564677.1| MutL [Enterococcus faecalis Merz96]
gi|293385299|ref|ZP_06631115.1| DNA mismatch repair protein HexB [Enterococcus faecalis R712]
gi|293389688|ref|ZP_06634132.1| DNA mismatch repair protein HexB [Enterococcus faecalis S613]
gi|312906650|ref|ZP_07765650.1| DNA mismatch repair protein [Enterococcus faecalis DAPTO 512]
gi|312910890|ref|ZP_07769725.1| DNA mismatch repair protein, C-terminal domain protein
[Enterococcus faecalis DAPTO 516]
gi|256951002|gb|EEU67634.1| MutL [Enterococcus faecalis Merz96]
gi|291077499|gb|EFE14863.1| DNA mismatch repair protein HexB [Enterococcus faecalis R712]
gi|291080935|gb|EFE17898.1| DNA mismatch repair protein HexB [Enterococcus faecalis S613]
gi|310627298|gb|EFQ10581.1| DNA mismatch repair protein [Enterococcus faecalis DAPTO 512]
gi|311288758|gb|EFQ67314.1| DNA mismatch repair protein, C-terminal domain protein
[Enterococcus faecalis DAPTO 516]
Length = 710
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|313893442|ref|ZP_07827014.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
sp. oral taxon 158 str. F0412]
gi|313442083|gb|EFR60503.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
sp. oral taxon 158 str. F0412]
Length = 676
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 170/356 (47%), Gaps = 35/356 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M TI+ L E N + +G V+ V++EL+ NS+DA AT + V +G Y+++ D+
Sbjct: 1 MATIHVLDETTINKIAAGEVVERPASVIKELIENSIDASATNIEVEIGDGGVAYMRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + L RH ATSK+ + D+ D I + GFRGEALASI+ VS + T+
Sbjct: 61 GIGMTEEDARLAILRH-ATSKIQQVEDLFD---IASLGFRGEALASIASVSHFSLTTRKA 116
Query: 120 GRPNGYRKVMKG---SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G R + G + C+ G GTT+ RDLFYN P RRK+++S +
Sbjct: 117 DSDLGTRITVDGGTFTDCIPYG-----AAPGTTIEIRDLFYNTPARRKFLKSE-RTESSK 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAN 235
++ V ++AL +P +SFK I +D + + + +++ +G + + V
Sbjct: 171 IQDIVGKLALSNPHISFKLI---VDDRVAIITPGNGNIGDTVAALYGYKTKDDIFTVAYE 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
++ I G +S P S + +Q + +N+R + I K ++ + + NG
Sbjct: 228 SDSIYIDGVVSKPTLLKSTRIWQTIIVNNRVISDKTIMKAID------NAYHALLPKNGH 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P +LN+ P + D+ P K+ V F D + + + I +A
Sbjct: 282 -----------PLVVLNITVPAGMVDINVHPRKSEVKFSDDKIIFKAVYHGILNAL 326
Score = 47.8 bits (112), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 26/192 (13%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI 1229
+ QV +I G L +IDQHAA ER+R ++L S E + + Q +
Sbjct: 494 MGQVASCYILAKKGDDLYIIDQHAAHERVRYDKL---CKSSESIPMQSILVPQYSEATDD 550
Query: 1230 GYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVD 1289
L++ E + D G+ ++ G T I L+ P V+L +
Sbjct: 551 EMNLVEEERETLLDLGF--DVELGGP--------------TKIKLVGAP----VDLVESK 590
Query: 1290 LLEFLQQLADTDGSSTTPPSV-LR--VLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
E LQ + P LR +L +CRGAI G +L + ++E+L T
Sbjct: 591 AFEILQYVFSYLHEHQQPTKAQLRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEK 650
Query: 1347 CFQCAHGRPTTV 1358
+ C HGRPT +
Sbjct: 651 PYVCPHGRPTII 662
>gi|164685701|ref|ZP_01946749.2| DNA mismatch repair protein MutL [Coxiella burnetii 'MSU Goat
Q177']
gi|164601208|gb|EAX32616.2| DNA mismatch repair protein MutL [Coxiella burnetii 'MSU Goat
Q177']
Length = 574
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 172/367 (46%), Gaps = 45/367 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I RL + N + +G V+ VV+EL+ NS+DA A+ + V + +++ DDG G
Sbjct: 3 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + LVL ERHA TSK+ A +DD I T GFRGEAL+SIS VS L + ++
Sbjct: 63 IHPEDLVLALERHA-TSKI---AKIDDLQDITTLGFRGEALSSISAVSRLTLTSRQKNAE 118
Query: 123 NGYR------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
GYR K+M + GTT+ +DLFYN P RRK+++ SP
Sbjct: 119 MGYRISNISHKIMTPVPAAH--------PQGTTIDVQDLFYNTPARRKFLR-SPATEFQH 169
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELL---CTCSSSSPLALLISSFGIEDFSFLDEVN 233
+++ + R+AL H + +F+ +E E++ + S + S G +
Sbjct: 170 IRRIIERLALSH--FTTEFLLHHNEKEIIHFKPATTISGQENRIKSILGDVFMQSALAIE 227
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 293
+ L + GYI+ + S QY+Y+N R+V I + L A D
Sbjct: 228 FSQSGLTLKGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQ--AYHDV-------- 277
Query: 294 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
G+ PAY+L L + D+ P K V F+D + V F+ A+++A +
Sbjct: 278 -LFHGRH------PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTALAQ 330
Query: 354 K---IAH 357
IAH
Sbjct: 331 AKPGIAH 337
>gi|257083164|ref|ZP_05577525.1| DNA mismatch repair protein [Enterococcus faecalis Fly1]
gi|256991194|gb|EEU78496.1| DNA mismatch repair protein [Enterococcus faecalis Fly1]
Length = 710
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|424759107|ref|ZP_18186780.1| DNA mismatch repair protein [Enterococcus faecalis R508]
gi|402405079|gb|EJV37680.1| DNA mismatch repair protein [Enterococcus faecalis R508]
Length = 710
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|253996214|ref|YP_003048278.1| DNA mismatch repair protein MutL [Methylotenera mobilis JLW8]
gi|253982893|gb|ACT47751.1| DNA mismatch repair protein MutL [Methylotenera mobilis JLW8]
Length = 610
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 175/353 (49%), Gaps = 32/353 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M TI LP+ + + + +G V+ ++EL+ NS+DAG+T + V + G+ ++V
Sbjct: 1 MATIRLLPDQLISQIAAGEVVERPASALKELLENSLDAGSTDIQVSLLQGGIKQ--MRVT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+G++++ L+L RHA TSK+ L D++ + + GFRGEALASI+ +S +++++
Sbjct: 59 DNGAGVAKEDLMLALTRHA-TSKISSLEDLES---VASLGFRGEALASIASISRTQLLSR 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G + +R +GS+ I+ D GT + DL++N P RRK++++ + H
Sbjct: 115 QSGSKHAWRIGSEGSEVST--IEPAALDAGTVIEVSDLYFNTPARRKFLKTEATEFGH-C 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
++ RIAL P VS ++ L + P G E + V+ +
Sbjct: 172 EEMFTRIALSRPDVSLM---LQHNGRALSRFAIGQPERRFSEVLGSEFVAESIPVDESAA 228
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
L + G + P + + + QYVY+N R+V K++ H +A L
Sbjct: 229 GLRLWGMAAKPTFNRNSRDTQYVYVNGRFVRD----KVIAHAI--------RQAYQDVLH 276
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
R PA++L L SL D+ P KT V F+D + V FI A+ A
Sbjct: 277 HDRH-----PAFVLFLELDPSLVDVNVHPAKTEVRFRDSQAVHRFIFHALHKA 324
Score = 44.7 bits (104), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L VID HAA ERI E+L+H + + ++V Q L+LP + + D
Sbjct: 436 LVVIDMHAAHERIMYEKLKHAL---DSQTVQM----QPLLLP-VSFN---------ADKL 478
Query: 1246 WICNIH--TQGSRSFNKNL--NLLQRQITVITLLAVPCIFGVNLSDVDLL----EFLQQL 1297
+ +H G+++ + L ++ T + + AVP + L D D + + L+ L
Sbjct: 479 EVATVHEALAGNQATLQQLGFDIAILSPTTLAVRAVPTM----LQDADAVILARDVLRDL 534
Query: 1298 ADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
+ S +L + AC A+ SL E ++ +++ T QC HGRPT
Sbjct: 535 REYGASRVLTERRNELLGTMACHAAVRANRSLTIPEMNALLRDMEATERSGQCNHGRPT 593
>gi|374600020|ref|ZP_09673022.1| DNA mismatch repair protein MutL [Myroides odoratus DSM 2801]
gi|423325183|ref|ZP_17303024.1| DNA mismatch repair protein mutL [Myroides odoratimimus CIP 103059]
gi|373911490|gb|EHQ43339.1| DNA mismatch repair protein MutL [Myroides odoratus DSM 2801]
gi|404607192|gb|EKB06726.1| DNA mismatch repair protein mutL [Myroides odoratimimus CIP 103059]
Length = 708
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 186/396 (46%), Gaps = 36/396 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDA AT++ V ++V+D+G G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPASVVKELIENAVDAEATEIKLVLKEAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ + ERHA TSK+ + +D + T GFRGEALASI+ ++ +++ T H
Sbjct: 65 MNETDARMAFERHA-TSKI---SKAEDLFALNTKGFRGEALASIAAIAHVDLKTCLHNSE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G V++GSK + + GT ++LF+N P RR +++S + L ++
Sbjct: 121 LGTHLVIEGSKVMAQEV--AVTPPGTVFSVKNLFFNIPARRNFLKSDNVE-LRNIVDEFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI LVHP +SF I SE + SS+ +++ FG L + + I
Sbjct: 178 RITLVHPGISFTMIHNGSE---VFNLPSSNLRQRIVNVFGTRTNEKLVPIEEITEIVTIR 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+I P + + Q+ ++N R++ G +H + + A+++ G L K
Sbjct: 235 GFIGKPEFAKKSRGEQFFFVNDRFIRSGYLH---HSVLAAYE---------GLL-----K 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P Y + L P D+ P KT + F D + + + + +I+ + + D
Sbjct: 278 DGTQPTYFIYLSVPPDSIDINIHPTKTEIKFDDEQALYSILRSSIKHSLGQFNVAPVLDF 337
Query: 363 DMLEDAELPLESSRFQSHQSSTHL-----HSSPLKN 393
E ++P E F+ ++ T L H +P N
Sbjct: 338 HRDEGLDVPYE---FKDREAETPLIEIDTHYNPFSN 370
>gi|449893956|ref|ZP_21789011.1| DNA mismatch repair protein [Streptococcus mutans SF12]
gi|449255573|gb|EMC53421.1| DNA mismatch repair protein [Streptococcus mutans SF12]
Length = 651
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 166/353 (47%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V+D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|429101920|ref|ZP_19163894.1| DNA mismatch repair protein MutL [Cronobacter turicensis 564]
gi|426288569|emb|CCJ90007.1| DNA mismatch repair protein MutL [Cronobacter turicensis 564]
Length = 639
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 173/360 (48%), Gaps = 32/360 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGGG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RH ATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARH-ATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GAL 239
RIAL V+ ++P + S I +FL++ A + G L
Sbjct: 177 RIALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEQALAIEWQHGDL 234
Query: 240 EISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 235 ALRGWVAEPKATTAALAEVQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQQ---- 285
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 286 --------PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAAN 336
>gi|449896270|ref|ZP_21789563.1| DNA mismatch repair protein [Streptococcus mutans R221]
gi|450046199|ref|ZP_21838821.1| DNA mismatch repair protein [Streptococcus mutans N34]
gi|449199231|gb|EMC00309.1| DNA mismatch repair protein [Streptococcus mutans N34]
gi|449262453|gb|EMC59902.1| DNA mismatch repair protein [Streptococcus mutans R221]
Length = 651
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 166/353 (47%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V+D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|71280731|ref|YP_267089.1| DNA mismatch repair protein MutL [Colwellia psychrerythraea 34H]
gi|123733831|sp|Q48A24.1|MUTL_COLP3 RecName: Full=DNA mismatch repair protein MutL
gi|71146471|gb|AAZ26944.1| DNA mismatch repair protein MutL [Colwellia psychrerythraea 34H]
Length = 652
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 167/356 (46%), Gaps = 25/356 (7%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGS 61
TI LP + N + +G V+ V++EL+ NS+DAGAT + + V +K+ D+G
Sbjct: 2 TIAILPARLANQIAAGEVVERPASVIKELIENSLDAGATSIHIDVDKGGIKKIKITDNGH 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI ++ L L RHA TSK+ L D++ IG+ GFRGEALASIS V+ L + +K +
Sbjct: 62 GIVKEELTLALSRHA-TSKIKSLNDLE---AIGSLGFRGEALASISSVARLTLTSKPQSQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++ V +G + + + I GT++ DLF+N P RRK++++ + H + + V
Sbjct: 118 ATAWQAVAEG-RDMSVNIKPAAHPDGTSIEVLDLFFNTPARRKFLRTEKTEFNH-IDEVV 175
Query: 182 LRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
RIAL H +VSF + + + + + + + G + EV+ +
Sbjct: 176 RRIALAHFEVSFSLTHNGNTVRQYRMASTHAQCIKRVAMVCGPKFIEHAVEVDCPHDNMT 235
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
+SG+++ P S S Y Y+N R + I+ + A D++
Sbjct: 236 LSGWLAKPSFSRSQNDLCYSYVNGRMMRDKLINHAIRQAYADLLPPDTY----------- 284
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
PA++L L+ H D+ P K V F V FI A +A
Sbjct: 285 ------PAFVLFLQLDHREVDVNVHPSKHEVRFHQSRYVHDFIYSVCHKALTSALA 334
>gi|311281278|ref|YP_003943509.1| DNA mismatch repair protein MutL [Enterobacter cloacae SCF1]
gi|308750473|gb|ADO50225.1| DNA mismatch repair protein MutL [Enterobacter cloacae SCF1]
Length = 623
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 178/382 (46%), Gaps = 41/382 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IRQEELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQP 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMDVTVRPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
RIAL V+ + ++ + L + G+ + G L +
Sbjct: 177 RIALARFDVTINLNHNGKAVRQYRAVPEGGQKERRLGAICGVPFVEHALAIEWQHGDLAL 236
Query: 242 SGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
G+++ P Y + + QY Y+N R + +L+NH A C D A
Sbjct: 237 RGWVADPQYTTAQLAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGAGEQ------ 285
Query: 301 SKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 359
PA++L L PH + D+ P K V F V FI + + S +++
Sbjct: 286 ------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQV---- 334
Query: 360 FDVDMLEDAELPL--ESSRFQS 379
DA LPL ES QS
Sbjct: 335 -------DAPLPLARESDDAQS 349
>gi|449973524|ref|ZP_21814764.1| DNA mismatch repair protein [Streptococcus mutans 11VS1]
gi|450106966|ref|ZP_21860779.1| DNA mismatch repair protein [Streptococcus mutans SF14]
gi|449179453|gb|EMB81664.1| DNA mismatch repair protein [Streptococcus mutans 11VS1]
gi|449222659|gb|EMC22378.1| DNA mismatch repair protein [Streptococcus mutans SF14]
Length = 651
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 166/353 (47%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V+D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|269797933|ref|YP_003311833.1| DNA mismatch repair protein MutL [Veillonella parvula DSM 2008]
gi|269094562|gb|ACZ24553.1| DNA mismatch repair protein MutL [Veillonella parvula DSM 2008]
Length = 681
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 172/356 (48%), Gaps = 35/356 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M TI+ L E N + +G V+ V++EL+ NS+DA AT + V +G Y+++ D+
Sbjct: 1 MATIHVLDETTINKIAAGEVVERPASVIKELIENSIDASATNIEVEIGEGGVAYMRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + L RH ATSK+ + D+ D I + GFRGEALASI+ VS +IT+
Sbjct: 61 GIGMTEEDARLAILRH-ATSKIQQVEDLFD---IASLGFRGEALASIASVSHFSLITRKA 116
Query: 120 GRPNGYRKVMKG---SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G R + G + C+ G GTT+ +DLFYN P RRK++++ +
Sbjct: 117 DSDLGTRITVDGGIFTDCIPYG-----AAPGTTIEIKDLFYNTPARRKFLKTERTEA-SK 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAN 235
++ V ++AL +P +SFK I +D + + ++ +++ +G + + V
Sbjct: 171 IQDIVGKLALSNPHISFKLI---IDDRVAIITPGNGDISDTVAALYGYKTKDDIFTVAYE 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
++ I G +S P S + +Q + +N+R + I K ++ + + NG
Sbjct: 228 SDSIYIDGVVSKPTLLKSTRIWQTIIVNNRVISDKTIMKAID------NAYHALLPKNGH 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P +LN+ P + D+ P K+ V F D + + + I +A
Sbjct: 282 -----------PLVVLNITVPARMVDINVHPRKSEVKFSDDKIIFKAVYHGILNAL 326
Score = 47.0 bits (110), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 38/198 (19%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI 1229
+ QV +I G L +IDQHAA ER+R ++L +S+ Q +++P+
Sbjct: 499 MGQVASCYILAKKGDDLYIIDQHAAHERVRYDKL-----CKSSESIPM----QSILVPQY 549
Query: 1230 G------YQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV 1283
L++ E + D G+ ++ G T I L+ P V
Sbjct: 550 NEATDDEMNLVEEEREILLDLGF--DVELGGP--------------TKIKLVGAP----V 589
Query: 1284 NLSDVDLLEFLQQLADTDGSSTTPPSV-LR--VLNSKACRGAIMFGDSLLPSECALIVEE 1340
+L + E LQ + P LR +L +CRGAI G +L + ++E+
Sbjct: 590 DLVESKAFEILQYVFSYLHDHQQPTKAQLRHEMLAYASCRGAIKAGHNLNMYQMTTLIED 649
Query: 1341 LKQTSLCFQCAHGRPTTV 1358
L T + C HGRPT +
Sbjct: 650 LFSTEKPYVCPHGRPTII 667
>gi|421532886|ref|ZP_15979229.1| DNA mismatch repair protein [Streptococcus agalactiae STIR-CD-17]
gi|403641844|gb|EJZ02756.1| DNA mismatch repair protein [Streptococcus agalactiae STIR-CD-17]
Length = 657
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 169/355 (47%), Gaps = 41/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 1 MSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + VL RH ATSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 61 GEGMTSEDAVLSLRRH-ATSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++
Sbjct: 117 QGKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
H + V R++L HP+V+F I+ E+ T S + +G+ + E++
Sbjct: 170 HII-DIVNRLSLAHPEVAFTLIN--DGKEMTKTSGISDLRQAIAGIYGLNTAKKMIEISN 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 227 ADLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRS 267
Query: 295 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 268 ILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISSAI 322
>gi|317493567|ref|ZP_07951988.1| DNA mismatch repair protein MutL [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918510|gb|EFV39848.1| DNA mismatch repair protein MutL [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 638
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 164/349 (46%), Gaps = 27/349 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I++D L L RHA TSK+ +DD I + GFRGEALAS+S VS L + ++ +
Sbjct: 63 INKDELALALARHA-TSKI---TSLDDLEAIMSLGFRGEALASVSSVSRLTMTSRTAEQN 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTTV DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTVKPAAHPVGTTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKF-IDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
RIAL V+ + + + + L S G E+ G L I
Sbjct: 177 RIALARFDVTIQLHHNGKMIRQYRAVKEDGQKDRRLGSICGTAFIQHALEIKWEHGDLAI 236
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
G+++ P S + QY Y+N R + KL+ H A D K +
Sbjct: 237 HGWVAGPVGSRQLTEMQYSYVNGRMMRD----KLITH-AIRQAYQDQLKDDQQ------- 284
Query: 302 KSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
PAY+L L PH + D+ P K V F V FI +A+ S
Sbjct: 285 -----PAYVLYLTVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVIS 327
>gi|406837073|ref|ZP_11096667.1| DNA mismatch repair protein [Lactobacillus vini DSM 20605]
Length = 648
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 179/374 (47%), Gaps = 44/374 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP + + + +G V+ VV+ELV N++DA +T++ +YV +KV+D+
Sbjct: 1 MTKIKELPAILADQIAAGEVVERPASVVKELVENAIDAQSTQIDIYVADSGLSLIKVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEAL---ASISDVSLLEIIT 116
G GI+ D L L RH +TSKL D + I T GFRGEAL AS++DV+L +T
Sbjct: 61 GQGIAADELELAFRRH-STSKLH---DKNGLFKIRTLGFRGEALPSIASVADVTLKTAMT 116
Query: 117 KAHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G R + K + + GT V+ R LFYN P R KY++ SP+ L
Sbjct: 117 DGQGMEIEIRGGQQLDKKII------ARPQGTEVMVRSLFYNTPARLKYLK-SPQTELAV 169
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAN 235
+ V R+AL HP+++ + + + +L + ++ L IS+ +G+++ + V+AN
Sbjct: 170 ISDIVDRLALGHPEIA---LSLHNNKRVLLQTAGNNNLQQTISAIYGVKNAQQMLPVHAN 226
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
D + G++S P + + K + + +N RY+ +++ N
Sbjct: 227 DLDFAVEGFVSLPKLTRATKNYITLLLNGRYI-------------------RNYQLTNAV 267
Query: 296 LKGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+KG SK P ++ L+ L D+ P K V + + I+ I +
Sbjct: 268 IKGYGSKLMVGRYPMAIIALKLDPVLVDVNVHPTKQEVRISKEKQLCELIQTTI----YQ 323
Query: 354 KIAHDSFDVDMLED 367
++A ++ D L D
Sbjct: 324 RLATENLIPDALAD 337
>gi|373857377|ref|ZP_09600119.1| DNA mismatch repair protein MutL [Bacillus sp. 1NLA3E]
gi|372453027|gb|EHP26496.1| DNA mismatch repair protein MutL [Bacillus sp. 1NLA3E]
Length = 656
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 145/268 (54%), Gaps = 11/268 (4%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L + + N + +G V+ VV+ELV NS+DAG+T + + + ++++D+
Sbjct: 1 MGKIILLDDTLSNKIAAGEVVERPASVVKELVENSIDAGSTIIEIEIEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G+GI D ++L +RH ATSK + D +D I T GFRGEAL SI+ V+ LE+ T +
Sbjct: 61 GAGIEEDDVLLAFQRH-ATSK---IKDENDLFRIRTLGFRGEALPSIASVARLELKT-ST 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G R V++G K RK GT + DLF+N P R KYM+S + L ++
Sbjct: 116 GLEAGTRAVIEGGKVDTFEKSASRK--GTDITITDLFFNTPARLKYMKSIHTE-LGNITD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+AL HP+VSF+ ++ +LL T + +L + +G+ + ++
Sbjct: 173 LVNRLALAHPEVSFRL--THNDRQLLQTNGNGDVRQVLAAIYGMNIVKNMIPISGTSLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYV 267
I GYIS P + + + + IN R++
Sbjct: 231 TIKGYISMPEFTRASRNYISTMINGRFI 258
>gi|289550909|ref|YP_003471813.1| DNA mismatch repair protein MutL [Staphylococcus lugdunensis
HKU09-01]
gi|385784537|ref|YP_005760710.1| DNA mismatch repair protein MutL [Staphylococcus lugdunensis
N920143]
gi|418414210|ref|ZP_12987426.1| DNA mismatch repair protein mutL [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180441|gb|ADC87686.1| DNA mismatch repair protein MutL [Staphylococcus lugdunensis
HKU09-01]
gi|339894793|emb|CCB54089.1| DNA mismatch repair protein MutL [Staphylococcus lugdunensis
N920143]
gi|410877848|gb|EKS25740.1| DNA mismatch repair protein mutL [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 637
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 167/360 (46%), Gaps = 36/360 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
MG I L ++ N + +G V+ + VV+EL+ N++DA AT++ V V G+ + ++VV
Sbjct: 1 MGKIKELQTSLANKIAAGEVVERPSSVVKELLENAIDADATEINVEVEESGISS--IRVV 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+GSGI D L L+ RHA TSKL D DD I T GFRGEALASIS V+ + +T
Sbjct: 59 DNGSGIEADDLNLVFHRHA-TSKL---HDDDDLFHIRTLGFRGEALASISSVAKV-TLTT 113
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G+ + + +Y RK GT V LFYN P R KY++S + L +
Sbjct: 114 CTDNEQGHEIYAENGQIVYKKPAKARK--GTDVKVESLFYNTPARLKYIKSLYTE-LGKI 170
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
V R+A+ HP + F + +L T S ++ +G++ L + +
Sbjct: 171 TDIVNRMAMSHPDIRFSLV--SDGKIMLQTNGSGKTNEVMADIYGMKVAKDLVHITGDTS 228
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
I GY++ P S S K + ++IN RY+ ++ N ++
Sbjct: 229 DYHIEGYVAKPEHSRSNKHYISIFINGRYI-------------------KNFILNKAIVE 269
Query: 298 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
G + P +N++ L D+ P K V E + I IR A+ +I
Sbjct: 270 GYHTLMMIGRYPICYINIKMDPILVDVNVHPTKLEVRLSKEEQLYQLIVEKIREAFHDRI 329
>gi|251783478|ref|YP_002997783.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242392110|dbj|BAH82569.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 660
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 192/417 (46%), Gaps = 50/417 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA +++V + + +++ D+
Sbjct: 1 MTKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQVTIDIEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + L L RHA TSK+ +D+ I T GFRGEAL S++ +S + I T
Sbjct: 61 GEGMSPEDLPLSLRRHA-TSKIKSQSDL---FRIRTLGFRGEALPSVASISKITIKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G V G + L ++ VGT + +LFYN P R KYM+S ++ H V
Sbjct: 117 EDNHGSLLVAIGGEIETL--EETSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
V R++L HP+VSF I S+ L S + L I+ +G+ + ++ D
Sbjct: 174 VVNRLSLAHPEVSFTLI---SDGRQLTQTSGTGDLRQAIAGIYGLNTAKKMIAISNADLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
E+SGY+S P + + + + + IN RY+ ++ N L G
Sbjct: 231 FEVSGYVSLPELTRANRNYMTILINGRYI-------------------KNFLLNRAILDG 271
Query: 299 KRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
SK P +++++ L D+ P K V ++A I AI + ++
Sbjct: 272 YGSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKERELMALISTAISESLKEQ-- 329
Query: 357 HDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLKNLA----KQRDHMFHKECE 407
D++ DA L S+R S T L PL++ QR+ F KE +
Sbjct: 330 ------DLIPDALENLAKSSTRHFSKPEQTQL---PLQSKGLYYDPQRNDFFVKESD 377
>gi|114048922|ref|YP_739472.1| DNA mismatch repair protein [Shewanella sp. MR-7]
gi|123030290|sp|Q0HR40.1|MUTL_SHESR RecName: Full=DNA mismatch repair protein MutL
gi|113890364|gb|ABI44415.1| DNA mismatch repair protein MutL [Shewanella sp. MR-7]
Length = 644
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 172/356 (48%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +K+ D+
Sbjct: 1 MG-IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDN 59
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI +D L L RHA TSKL L DD I +FGFRGEALASIS VS L + ++
Sbjct: 60 GSGIPKDELALALSRHA-TSKLHSL---DDLEAILSFGFRGEALASISSVSRLTLTSRTA 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ ++ +G + + + VG+T+ DLF+N P RR++++S + H + +
Sbjct: 116 EQTEAWQAYAEGVD-MAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTH-IDE 173
Query: 180 CVLRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNAN 235
+ RIALV + F + ++ + L L G + F DE V
Sbjct: 174 WLKRIALVRGDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQVAGRQ---FADEALRVECQ 230
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
L +SGY+ SP+ ++ + Y Y+N R V +L+NH F
Sbjct: 231 HDDLRLSGYLQSPWSTV-LTDTHYFYVNGRLVRD----RLVNH-----------AVRQAF 274
Query: 296 LKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
+ + P Y+L L PH + D+ P K V F V +I +A++SA
Sbjct: 275 AQKAEVEQ---PGYVLMLDIDPHQV-DVNVHPAKHEVRFHQSRYVHDYILQALQSA 326
>gi|442610707|ref|ZP_21025417.1| DNA mismatch repair protein MutL [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441747736|emb|CCQ11479.1| DNA mismatch repair protein MutL [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 614
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 172/357 (48%), Gaps = 34/357 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
M I LP + N + +G V+ VV+ELV NS+D+GAT++ + + + +++ D+
Sbjct: 1 MALIEILPAQLANQIAAGEVVERPASVVKELVENSLDSGATRIQIDIERGGHKLIRIRDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI+++ L L RHA TSKL L DD I + GFRGEALASIS VS L + +K
Sbjct: 61 GSGIAKEELTLALSRHA-TSKLKTL---DDLENIISLGFRGEALASISSVSRLTLSSKPQ 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ ++ +G + + + + GTTV +DLF+N P RRK++++ + H + +
Sbjct: 117 AQETAWQAFAEG-RDMAVQVQPTSHPDGTTVEVKDLFFNTPARRKFLRTEKTEFAH-IDE 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG----IEDFSFLDEVNAN 235
V RIAL V+F +C SS ++ G IE SFL+ +
Sbjct: 175 LVKRIALSRFDVAFTLTHNNKVIRQYRSCGSSEANVQRVAQVGGKAFIEQASFLE--SGT 232
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
DG L + G++ S A QY Y+N R + KL+ H +++ G
Sbjct: 233 DG-LHLLGWLMPIGTS---GATQYTYVNGRMMRD----KLILHA-----IRQAYEEIIG- 278
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
+Q P+++L L D+ P K V F + FI +A+R M
Sbjct: 279 -------AQEIPSFVLYLELDPRQVDVNVHPAKHEVRFHQARLIHDFIVQAVRQVVM 328
>gi|227544211|ref|ZP_03974260.1| DNA mismatch repair protein MutL [Lactobacillus reuteri CF48-3A]
gi|338204108|ref|YP_004650253.1| DNA mismatch repair protein HexB [Lactobacillus reuteri SD2112]
gi|133930483|gb|ABO43813.1| MutL [Lactobacillus reuteri]
gi|227185804|gb|EEI65875.1| DNA mismatch repair protein MutL [Lactobacillus reuteri CF48-3A]
gi|336449348|gb|AEI57963.1| DNA mismatch repair protein HexB [Lactobacillus reuteri SD2112]
Length = 668
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 180/374 (48%), Gaps = 35/374 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L + N + +G V+ +V+ELV NS+DA + +V + V V+V+DD
Sbjct: 1 MGKIHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + + L RH ATSK+ D+ + T GFRGEAL SI+ V+ + + T
Sbjct: 61 GDGIAAEDIRLAFHRH-ATSKINSRHDL---FKVQTMGFRGEALPSIASVADVTLTTAQA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G+ G ++G K L + R+ GT + DLF+N P R KY++ SP+ L +
Sbjct: 117 GQEEGTMIHLRGGKELVVKPAGARQ--GTDIKVTDLFFNTPARLKYLK-SPQTELTRITD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL +P V+F F + EL + +++ ++ + +G++ + E++ D
Sbjct: 174 IINRLALANPAVAFSF--THNGRELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDDF 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++SG++S P + + + + + IN RY+ +++ +G
Sbjct: 232 KVSGFVSLPELTRASRQYITITINHRYIR-------------------NFELTKAITQGY 272
Query: 300 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
SK P ++N+ L D+ P K V + ++ I IR ++IA
Sbjct: 273 ESKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLIKLIAETIR----QRIAV 328
Query: 358 DSFDVDMLEDAELP 371
++ D+ D +P
Sbjct: 329 ENLIPDVDADQFIP 342
>gi|27382604|ref|NP_774133.1| DNA mismatch repair protein [Bradyrhizobium japonicum USDA 110]
gi|81841408|sp|Q89DE6.1|MUTL_BRAJA RecName: Full=DNA mismatch repair protein MutL
gi|27355776|dbj|BAC52758.1| DNA mismatch repair protein [Bradyrhizobium japonicum USDA 110]
Length = 603
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 171/360 (47%), Gaps = 40/360 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
+ +LPE V N + +G V+ VV+ELV N++DAGA+++ V+ G + + DDGSG
Sbjct: 3 VRQLPEQVVNRIAAGEVVERPASVVKELVENAIDAGASRIDVFTDGGGRRRIGITDDGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ L L ERHA TSKL D +D I T GFRGEAL SI V+ L I T+ G P
Sbjct: 63 MTAKDLALAVERHA-TSKL----DDEDLLQIRTLGFRGEALPSIGSVARLSITTRHAGEP 117
Query: 123 NGYRKVMKG---SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ + ++G S+ + + GT V DLFY P R K++++ + ++++
Sbjct: 118 HAWALTVEGGEKSEIMPAALAH-----GTRVEVNDLFYATPARLKFLKTD-RTEAEAIRE 171
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSP-----LALLISSFGIEDFSFLDEVNA 234
V R+A+ P V+F + E+ T +++ P L L G E S EV+A
Sbjct: 172 VVRRLAMARPDVAFT---LAGEERAPVTWAAALPGAAGRLTRLGDILGAEFRSHAIEVHA 228
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
+ +SGY ++P + + QY+++N R P+ L A SD
Sbjct: 229 EREGIVVSGYAAAPALTKANALGQYLFVNGR-----PVRDKLILGAVRAAYSD------- 276
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
+L R P L + D P KT V F++ V A I ++ A ++
Sbjct: 277 YLPRDRH-----PVLALFVTLDPREVDANVHPAKTEVRFRNAGLVRALIVHGLKEALARE 331
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1231
Q+ + +I L ++DQHAA ERI E L+ L+ G L + + + E
Sbjct: 420 QIHETYIVSQTRDGLIIVDQHAAHERIVYEGLKAS-LAANGVQRQILLIPEIVEMDEATV 478
Query: 1232 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1291
+ L ++++ +G G+ + + P + G + L
Sbjct: 479 ERLLERSDELASFGLAIESFGPGA----------------VAVRETPSLLGKTNAGGLLR 522
Query: 1292 EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCA 1351
+ + +A+ D + ++ V + AC G++ G L P E ++ E+++T QC
Sbjct: 523 DLSEHMAEWDEALPLERRLMHVAATMACHGSVRAGRRLRPEEMNALLREMEETPNSGQCN 582
Query: 1352 HGRPTTVPL 1360
HGRPT V L
Sbjct: 583 HGRPTYVEL 591
>gi|302345880|ref|YP_003814233.1| DNA mismatch repair protein MutL [Prevotella melaninogenica ATCC
25845]
gi|302149101|gb|ADK95363.1| DNA mismatch repair protein MutL [Prevotella melaninogenica ATCC
25845]
Length = 630
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 168/349 (48%), Gaps = 32/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV N++DAGAT + + V ++V+DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGATHIDVLVVDAGRTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK + DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERH-ATSK---IRKADDLFSLRTMGFRGEALASIAAVAQIELKTRMESED 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + GS+ + G + VG+ + +LF+N P RRK+++S+ + L+++
Sbjct: 121 LGTHLSIAGSR--FTGQEPCSCPVGSNFLVENLFFNVPARRKFLKSNTTE-LNNIITAFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI LV+P++SF +E L CS ++ FG L ++ + I
Sbjct: 178 RIVLVYPQISFTLHSNGTELFNLRACSYRQ---RIVEVFGKRLNQDLLPIDVDTSLCHIH 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + QY ++N RY+ HK + +FD +
Sbjct: 235 GFVGKPESARKKAPHQYFFVNDRYMKHPYFHK---AVITAFD-------------RLIPQ 278
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAI 347
+ P Y L P D+ P KT + F++ W+ +LA ++ A+
Sbjct: 279 GEQVP-YFLYFDVPAENIDVNIHPTKTEIKFENEQAIWQILLAAVKEAV 326
>gi|397650619|ref|YP_006491146.1| DNA mismatch repair protein [Streptococcus mutans GS-5]
gi|449994775|ref|ZP_21822702.1| DNA mismatch repair protein [Streptococcus mutans A9]
gi|392604188|gb|AFM82352.1| DNA mismatch repair protein [Streptococcus mutans GS-5]
gi|449184935|gb|EMB86844.1| DNA mismatch repair protein [Streptococcus mutans A9]
Length = 651
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 166/353 (47%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V+D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|450174689|ref|ZP_21884720.1| DNA mismatch repair protein [Streptococcus mutans SM1]
gi|449248145|gb|EMC46406.1| DNA mismatch repair protein [Streptococcus mutans SM1]
Length = 651
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 166/353 (47%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V+D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|421081712|ref|ZP_15542621.1| DNA mismatch repair protein MutL [Pectobacterium wasabiae CFBP
3304]
gi|401703525|gb|EJS93739.1| DNA mismatch repair protein MutL [Pectobacterium wasabiae CFBP
3304]
Length = 658
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 173/359 (48%), Gaps = 33/359 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHA-TSKITTL---DDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 238
RIAL V+ I + +L+ ++ + G I +FL V+
Sbjct: 177 RIALARFDVA---ITLHHNGKLMRQYRAAPDKSQYERRLGTICGATFLQHALAVSWQHDD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P + + QY Y+N R + +L+NH A +
Sbjct: 234 LTIHGWVADPVGAKQLPDMQYCYVNQRMMRD----RLINH------------AIRQAYQD 277
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
+ S Q PAY+L L PH + D+ P K V F V FI +A+ S + A
Sbjct: 278 QLSDDQQ-PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMSVLQQASA 334
>gi|317500421|ref|ZP_07958645.1| DNA mismatch repair protein MutL [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089572|ref|ZP_08338471.1| hypothetical protein HMPREF1025_02054 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336438887|ref|ZP_08618508.1| hypothetical protein HMPREF0990_00902 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316898176|gb|EFV20223.1| DNA mismatch repair protein MutL [Lachnospiraceae bacterium
8_1_57FAA]
gi|330404940|gb|EGG84478.1| hypothetical protein HMPREF1025_02054 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336017377|gb|EGN47139.1| hypothetical protein HMPREF0990_00902 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 692
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 209/449 (46%), Gaps = 45/449 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ +V+ELV N++DA AT V V + G+ +++V
Sbjct: 1 MPHIQVLDQITIDKIAAGEVIERPASIVKELVENAIDAKATSVTVEIKDGGIS--FIRVT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI D + RH+ TSK+ ++ I + GFRGEAL+SI+ V+ E+ITK
Sbjct: 59 DNGCGIEADEVRCAFLRHS-TSKI---RTAEELVSIHSLGFRGEALSSIAAVTRTEVITK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
+G + V++G K L ++ GTT + LFYN P RRK++++ + H V
Sbjct: 115 TEEGQSGIKYVIEGGKETAL--EETGAPNGTTFLIHQLFYNIPARRKFLKTPVTEAGH-V 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ ++ +AL HP+VSF FI+ + E L T + ++ + +G E S L E++
Sbjct: 172 QDLLIHLALSHPEVSFLFIN--NGQEKLRTSGNGKLKDVIYNVYGREVTSNLLELDYKKD 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
L ISG++ P + + F+ ++N RYV + K L F +
Sbjct: 230 GLSISGFLGKPVITRGNRNFENFFVNGRYVKSAMLSKSLEDAYKDFTMQHKF-------- 281
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
P +L+ + L D+ P K + F+ + V + A+ +
Sbjct: 282 ---------PFAVLHFQVEGDLIDVNVHPTKMELRFQRQQEVYNTMYEAVHRRLL----- 327
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHL------HSSPLKNLAKQRDHMFHKECERITF 411
+ ++++ A +P + Q + S L ++ + K R+ M +E E++
Sbjct: 328 ---EPELIQTATVPDPADAAQKKKESPFLLKPKSIENTKYDPIEKIREKMQEREPEQVRE 384
Query: 412 QEFQKDPVELAEENTEMEFFSQPKHSSSL 440
+ + P ++ E+ + E K +S++
Sbjct: 385 KAQETKPEQVREKVQDEEQGQARKQTSAI 413
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 1185 TLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDW 1244
+L +IDQHAA ER+ E ++ S E S YL L L QLL+ ++
Sbjct: 521 SLYIIDQHAAHERVMYERTLKEMKSREYTS-QYLSPPIILSLSMQEAQLLEEHIDRFTRI 579
Query: 1245 GWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGS 1303
G+ I G + + AVP +FG+ ++ L+E + LAD +
Sbjct: 580 GF--EIEHFGGEEY--------------AVRAVPDNLFGIAKKEL-LMEMIDDLADGINT 622
Query: 1304 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
S TP + + S +C+ A+ + L E ++ EL + C HGRPT + +
Sbjct: 623 SMTPDLIDEKVASMSCKAAVKGNNRLSAKEVDALIGELLTLDNPYHCPHGRPTIIAMTKR 682
Query: 1364 E 1364
E
Sbjct: 683 E 683
>gi|25012090|ref|NP_736485.1| DNA mismatch repair protein [Streptococcus agalactiae NEM316]
gi|81588689|sp|Q8E2R5.1|MUTL_STRA3 RecName: Full=DNA mismatch repair protein MutL
gi|24413634|emb|CAD47711.1| Unknown [Streptococcus agalactiae NEM316]
Length = 657
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 169/355 (47%), Gaps = 41/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 1 MSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + VL RH ATSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 61 GEGMTSEDAVLSLRRH-ATSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++
Sbjct: 117 QGKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
H + V R++L HP+V+F I+ E+ T + + +G+ + E++
Sbjct: 170 HII-DIVNRLSLAHPEVAFTLIN--DGKEMTKTSGTGDLRQAIAGIYGLNTAKKMIEISN 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 227 ADLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRS 267
Query: 295 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 268 ILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISTAI 322
>gi|123440758|ref|YP_001004750.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166232113|sp|A1JIR3.1|MUTL_YERE8 RecName: Full=DNA mismatch repair protein MutL
gi|122087719|emb|CAL10504.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 635
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 187/381 (49%), Gaps = 37/381 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGA+++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARHA-TSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQN 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIAL V+ I++ +L+ S L S G ++ G
Sbjct: 177 RIALARFDVA---INLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S ++ QY Y+N+R + +L+NH +A LK
Sbjct: 234 LTIRGWVADPAASRTLSEMQYCYVNNRMMRD----RLINHAIR--------QAYQDLLKD 281
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 282 DQQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQTAT 334
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+++ ED E +E+ R+Q
Sbjct: 335 PLLNIN--EDGE-EIEAPRWQ 352
>gi|238797610|ref|ZP_04641107.1| DNA mismatch repair protein mutL [Yersinia mollaretii ATCC 43969]
gi|238718607|gb|EEQ10426.1| DNA mismatch repair protein mutL [Yersinia mollaretii ATCC 43969]
Length = 630
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 142/531 (26%), Positives = 233/531 (43%), Gaps = 82/531 (15%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I+++ L L RH ATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 INKEDLALALARH-ATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQN 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIAL V+ I++ +L+ S L S G ++
Sbjct: 177 RIALARFDVA---INLSHNGKLMRQYRAATDPSQHERRLASICGPAFLQHALAISWQHDD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S ++ QY Y+NSR + +L+NH +A LK
Sbjct: 234 LTIRGWVADPAASRTLSEMQYCYVNSRMMRD----RLINHAIR--------QAYQDLLKD 281
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 282 DQQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQAAT 334
Query: 358 DSFDVDMLEDAELPLESSRFQSHQS-----STHLHSSPLKNLAKQRDHMF--------HK 404
+V+ ED E +E+ R+Q + + P K L +R+ H
Sbjct: 335 PVLNVN--EDGE-EIEAPRWQPENRVAAGVNKYAQPEPTKTLPIERNAATERVSSVREHA 391
Query: 405 ECERITFQEFQKDPVELAEENTEMEFFS---------------QPKHSSSLLDG---SFA 446
T Q +QK EL + + + +P + + L G SF
Sbjct: 392 APAYSTGQPYQKQQGELYRQLVQPAVMTPPAELRAPVVAPPKPRPTPADAPLQGDHYSFG 451
Query: 447 ECLPIVPP---KIDHR------VWTIESSWFQDHQPSRHLFSPPLENLKKE 488
L + PP I+++ + W + Q +PP E L+ +
Sbjct: 452 RVLTVFPPCYALIEYKQGIALLALKVAERWLKQAQ-----LNPPPEGLRPQ 497
>gi|299144076|ref|ZP_07037156.1| DNA mismatch repair protein MutL [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518561|gb|EFI42300.1| DNA mismatch repair protein MutL [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 619
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 148/270 (54%), Gaps = 12/270 (4%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSGISR 65
L EA + +G ++ + +V+EL+ NS+DA A + V V G Y+++ DDG G+ +
Sbjct: 6 LDEATIAKIAAGEIIENPASIVKELLENSIDAKAKNIIVEVRGNIGSYIRITDDGIGMDK 65
Query: 66 DGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGY 125
D L L RH+ TSKL D+ + I + GFRGEALASIS +S +E++TK +G
Sbjct: 66 DDLNLAFLRHS-TSKLKTAEDLHN---IVSLGFRGEALASISHISKIEVLTKTKDDLSGT 121
Query: 126 RKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIA 185
R ++ K + ++ VGTT +D+FYN PVR+KY++ + + + + V +IA
Sbjct: 122 RAEIEDGKI--VKMNSIGLPVGTTFYVKDVFYNMPVRKKYLKLDNTE-FNYIYEVVQKIA 178
Query: 186 LVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDGALEISGY 244
L +P +S K I +++++ S++ L + S G E S L E N + + +I +
Sbjct: 179 LGNPDISIKLI---RDNKVILNSSATDNLKNHIFSILGREVASNLIEGNFSSNSYKIKSF 235
Query: 245 ISSPYDSISVKAFQYVYINSRYVCKGPIHK 274
IS S + QY+YIN RYV I K
Sbjct: 236 ISDNKLYRSNRYHQYIYINGRYVKNLDISK 265
Score = 41.2 bits (95), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 73/189 (38%), Gaps = 31/189 (16%)
Query: 1182 AGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI------GYQLLQ 1235
+ G +IDQHAA ERI E+ + + + E S Q L+ PEI + L+
Sbjct: 448 SKGRCYLIDQHAAHERILYEKFKEQFENSEVLS-------QILITPEIIELSVEEKEKLE 500
Query: 1236 NFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQ 1295
N E K G+ I G S I + VP IFG + D +
Sbjct: 501 NNYELFKSLGF--EIEEFGENS--------------IVIRQVPMIFGHGVR-YDFIHDTI 543
Query: 1296 QLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1355
D S+ +++ GD L E +++ L + + C HGRP
Sbjct: 544 DSLDKIKQSSYEVDSYKIMKKACKAAV-KAGDELSDMEVQALIKSLLECKNPYTCPHGRP 602
Query: 1356 TTVPLVNLE 1364
T + L +LE
Sbjct: 603 TIIELKSLE 611
>gi|148658624|ref|YP_001278829.1| DNA mismatch repair protein MutL [Roseiflexus sp. RS-1]
gi|148570734|gb|ABQ92879.1| DNA mismatch repair protein MutL [Roseiflexus sp. RS-1]
Length = 605
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 174/357 (48%), Gaps = 34/357 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I L V + +G V+ VV ELV N++DAGA ++ V G ++V DDG G
Sbjct: 3 IRVLDATVAAQIAAGEVIERPASVVRELVENALDAGARRIAVEARGGGLREIRVQDDGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I D + L RHA TSKL + DD I T GFRGEAL SI+ V+ + IT+A G
Sbjct: 63 IPADEVELAFARHA-TSKL---STADDLWSISTLGFRGEALPSIAAVAQVICITRAAGAD 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + G + I GTT+ R+LFYN PVRR++++S + ++ V
Sbjct: 119 VGVELRIAGGEV--QAIMPRGCSPGTTISVRNLFYNTPVRREFLRSDATES-AAITAVVT 175
Query: 183 RIALVHPKVSFKF-IDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA--- 238
+ AL +P+V F ID + L T + A I +G++ L V A+ G
Sbjct: 176 QYALAYPEVRFSLAIDGRAT---LHTSGNGDLRAAAIEVYGLDVARQLLPVEASTGEGVE 232
Query: 239 -LEISGYISSPYDSISVKAFQYVYINSRYV-CKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+++SG +S P + S +A ++++N R + +G I +L + +
Sbjct: 233 YVQVSGLVSPPGLTRSSRAAIHLFVNRRAIQPRGQIAMVLEEAYHTL-----------LM 281
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
KG+ P +LN+ + D+ P K+ V F+D V++ + RA+RSA ++
Sbjct: 282 KGRH------PVAILNISVHPAAVDVNVHPTKSEVKFRDTTRVMSTLGRAVRSALLE 332
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 39/230 (16%)
Query: 1156 PDSI---NKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEG 1212
PD + S L +++ Q+ + +I + + +IDQHAA ERI E L + +G
Sbjct: 404 PDPLPPTRASRLPPLRIIGQIAQSYIVAESADGMYLIDQHAAHERITYERLMAQRGAGAV 463
Query: 1213 KSVAYLDAEQELVLPEI------GYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQ 1266
+S QEL++P++ + LL A ++ +WG++ F ++L
Sbjct: 464 ES-------QELLMPQVVDLPPTAHDLLLAAANRLAEWGFVVE-------PFGRSLR--- 506
Query: 1267 RQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKACRGAIM 1324
+ A+P + LLE L+ G++ P R +L + +C ++
Sbjct: 507 -------VRAIPAVLYPGDLTTALLEIADHLSGRGGAT---PHDWREAMLITLSCHTSVR 556
Query: 1325 FGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLN 1374
G +L E +V +L+Q C HGRPT + L+ + +Q ++
Sbjct: 557 AGQTLSFDEMRGLVMQLEQCESPRTCPHGRPTMI-LLTTTQIERQFGRIR 605
>gi|149370649|ref|ZP_01890338.1| DNA mismatch repair protein [unidentified eubacterium SCB49]
gi|149356200|gb|EDM44757.1| DNA mismatch repair protein [unidentified eubacterium SCB49]
Length = 618
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 170/346 (49%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGA+ + V ++V+DDG G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASTITLVIKDAGKTLIQVIDDGVG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ L ERHA TSK+ D+ + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MNVTDARLAFERHA-TSKIKAAEDL---FNLHTKGFRGEALASIAAIAHVELKTKTEEDD 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + ++GS+ I K G+T+ ++LFYN P RR +++S+ ++ H + +
Sbjct: 121 VGTQICIEGSEVTSQEIVVTPK--GSTISVKNLFYNIPARRNFLKSNTVEIRHIIDEF-H 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP + F I+ S+ + SS+ +++ G + L V L+++
Sbjct: 178 RVALAHPNLGFTMINNGSD---VFKLPSSNLRQRIVNIMGTKTNEKLVPVTEETDILKVN 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P S + QY ++N+R++ H L + + A+++ G +K
Sbjct: 235 GFVIKPEFSKKSRGDQYFFVNNRFIKS---HYLHHAVTAAYE---------GLVKDGTQ- 281
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P Y L L D+ P KT + F D + A + I+
Sbjct: 282 ----PGYFLFLDVNPQSIDINIHPTKTEIKFDDEHAIYAMLRATIK 323
>gi|37681257|ref|NP_935866.1| DNA mismatch repair protein [Vibrio vulnificus YJ016]
gi|61214242|sp|Q7MH01.1|MUTL_VIBVY RecName: Full=DNA mismatch repair protein MutL
gi|37200008|dbj|BAC95837.1| DNA mismatch repair enzyme [Vibrio vulnificus YJ016]
Length = 664
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 219/496 (44%), Gaps = 85/496 (17%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ VV+ELV NS+D+GATK+ + + +++ D+GS
Sbjct: 2 TIRILPARLANQIAAGEVVERPASVVKELVENSLDSGATKIDIDIEKGGAKLIRIRDNGS 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI +D L L RH ATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 62 GIVKDELGLALSRH-ATSKIHTL---DDLEAIMSLGFRGEALASISSVSRLTLTSRPATQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ +G + + + + +GTTV DLF+N P RRK++++ + H + + +
Sbjct: 118 EQAWSAYTEG-RDMQVKLQPTAHPIGTTVEVVDLFFNTPARRKFLRTEKTEFAH-IDELL 175
Query: 182 LRIALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFS 227
RIAL VS K I D+++E L C + +L
Sbjct: 176 KRIALSRFDVSITLRHNGKVIRQYRAAHNDLQAEKRLATVCGQAFVRCML---------- 225
Query: 228 FLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCS 286
++ L++ G+I++P + QY Y+N R + KL+NH + S++ S
Sbjct: 226 ---KIELEHQGLKLHGWITTPEGARQQSDLQYCYVNGRMMRD----KLINHAIRQSYETS 278
Query: 287 DSWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIER 345
K + AY+L + PH + D+ P K V F V FI +
Sbjct: 279 --------------LKPEQFAAYVLFIELDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQ 323
Query: 346 AIRSAWMKKIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKE 405
A+ SA + D +E ++ + +Q+ L S P ++ E
Sbjct: 324 ALASALAQS--------DSIEQPQINESAFHYQAEPEVAPLGSFPAES----------NE 365
Query: 406 CERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFA--ECLPIVPPKIDHRVWTI 463
+ + +K P + E + QP + L+ SF+ + + P + R
Sbjct: 366 VPQAVYHAIEKAPAYPRKAGQEQQL--QP---VAPLESSFSSEQGREVAPAPHNER---- 416
Query: 464 ESSWFQDHQPSRHLFS 479
++W + P+RH S
Sbjct: 417 -NAWMESRSPARHTTS 431
>gi|258515357|ref|YP_003191579.1| DNA mismatch repair protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779062|gb|ACV62956.1| DNA mismatch repair protein MutL [Desulfotomaculum acetoxidans DSM
771]
Length = 639
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 143/269 (53%), Gaps = 12/269 (4%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGAT--KVFVYVGVCNCYVKVVD 58
M I L E N + +G V+ VV+ELV NS+DAGA+ ++ +Y G + V+D
Sbjct: 1 MPKIIILDELTANQIAAGEVVERPASVVKELVENSLDAGASAIEINIYEGGLKS-ITVID 59
Query: 59 DGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 118
+GSG+S + VL RHA TSKL A +D T I T GFRGEAL SI+ ++ +E+ T+A
Sbjct: 60 NGSGMSEEDAVLAFYRHA-TSKL---ASAEDLTNINTMGFRGEALPSIASIARVELKTRA 115
Query: 119 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
+G R + G K L +G GT+V DLFYN P R K+MQ++ + +
Sbjct: 116 QDSVSGIRLEISGGKTLSVG--SAGCPPGTSVTVSDLFYNTPARLKHMQTASAEAAR-IN 172
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ V R+A+ P+VSF+ + + S S L + + +GI+ L + +
Sbjct: 173 ELVNRLAMAKPEVSFRL--RHNGRNVFYAPGSGSLLDAVAAVYGIKIARELIPLEEENAL 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYV 267
L+I GY S P + + Q ++IN R V
Sbjct: 231 LKIYGYTSRPSVNRGNRKQQTLFINHRLV 259
Score = 42.0 bits (97), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 131/314 (41%), Gaps = 48/314 (15%)
Query: 1061 KPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSIISGTKWRNG 1120
+P E+ +F PD KI + + D ++K + L ++A+ ++ +G +
Sbjct: 349 EPYQEKLNFTPD-KIAEAKLRDNPTQENNSHYKRPVLEEKKLASEAK-ENLETGNRLVQV 406
Query: 1121 HPQT---TNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKF 1177
+ QT +NNI QD I + T P + S L Q+ +
Sbjct: 407 NNQTGRAESNNIRNPAAGQDQAQIIVRQ--NTTVSEKAPVNKKNSSFPSLWPLAQLMPTY 464
Query: 1178 IPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNF 1237
I A L +IDQHAA ERI E+ + + EG+ V+ Q L++P I +L NF
Sbjct: 465 ILASADKGLFIIDQHAAHERILFEKYQKQF--SEGQVVS-----QMLLIP-ITLEL--NF 514
Query: 1238 AEQ---------IKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDV 1288
E+ +K+ G+I F K LL+ VP N+S
Sbjct: 515 REEELIIKHIILLKEIGFII-------EEFGKGTFLLR---------GVPG----NVSPG 554
Query: 1289 DLLEFLQQLADTDGSSTTPPSVL--RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
+ + D S T VL + + AC+ A+ G+ L PS ++E+L +T
Sbjct: 555 QEKDLFFDILDFSEDSLTGREVLVQNMAAAMACKAAVKAGEKLTPSAMLALLEQLAETES 614
Query: 1347 CFQCAHGRPTTVPL 1360
+ C HGRPT + L
Sbjct: 615 PYTCPHGRPTLIHL 628
>gi|421147489|ref|ZP_15607176.1| DNA mismatch repair protein [Streptococcus agalactiae GB00112]
gi|401685843|gb|EJS81836.1| DNA mismatch repair protein [Streptococcus agalactiae GB00112]
Length = 657
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 169/355 (47%), Gaps = 41/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 1 MSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + VL RH ATSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 61 GEGMTSEDAVLSLRRH-ATSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++
Sbjct: 117 QGKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
H + V R++L HP+V+F I+ E+ T + + +G+ + E++
Sbjct: 170 HII-DIVNRLSLAHPEVAFTLIN--DGKEMTKTSGTGDLRQAIAGIYGLNTAKKMIEISN 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 227 ADLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRS 267
Query: 295 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 268 ILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISSAI 322
>gi|290581354|ref|YP_003485746.1| mismatch repair protein [Streptococcus mutans NN2025]
gi|450068240|ref|ZP_21847051.1| DNA mismatch repair protein [Streptococcus mutans NLML9]
gi|254998253|dbj|BAH88854.1| putative mismatch repair protein [Streptococcus mutans NN2025]
gi|449207235|gb|EMC07913.1| DNA mismatch repair protein [Streptococcus mutans NLML9]
Length = 651
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DSRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|410595359|ref|YP_006952086.1| DNA mismatch repair protein mutL [Streptococcus agalactiae SA20-06]
gi|410518998|gb|AFV73142.1| DNA mismatch repair protein mutL [Streptococcus agalactiae SA20-06]
Length = 676
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 170/355 (47%), Gaps = 41/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
+ I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 20 LSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 79
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + VL RHA TSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 80 GEGMTSEDAVLSLRRHA-TSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATE 135
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++
Sbjct: 136 QGKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELA 188
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
H + V R++L HP+V+F I+ E+ T +S + +G+ + E++
Sbjct: 189 HII-DIVNRLSLAHPEVAFTLIN--DGKEMTKTSGTSDLRQAIAGIYGLNTAKKMIEISN 245
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 246 ADLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRS 286
Query: 295 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 287 ILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISSAI 341
>gi|78188128|ref|YP_378466.1| DNA mismatch repair protein [Chlorobium chlorochromatii CaD3]
gi|123757053|sp|Q3AUA2.1|MUTL_CHLCH RecName: Full=DNA mismatch repair protein MutL
gi|78170327|gb|ABB27423.1| DNA mismatch repair protein MutL [Chlorobium chlorochromatii CaD3]
Length = 644
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 169/357 (47%), Gaps = 38/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I RLP++V N + +G V+ VV+EL+ N++DAGATK+ V + +++ D+
Sbjct: 1 MPIITRLPDSVANKISAGEVVQRPASVVKELLENAIDAGATKISVTIKDAGKELIRIADN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++RD +L ER ATSK+ D+D + T GFRGEALASI VS E+ T+
Sbjct: 61 GVGMNRDDALLCVERF-ATSKIKSADDLD---ALHTLGFRGEALASICSVSHFELKTRQA 116
Query: 120 GRPNGYR-KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + GS L + E+ GT+ R+LFYN P RRK+++S+ + H +
Sbjct: 117 DATLGLLFRYDGGSLVEELEVQAEQ---GTSFSVRNLFYNVPARRKFLKSNATE-YHHLF 172
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
+ V L +P++ ++ ++ +DE L ++ L L +G + S L EV +
Sbjct: 173 EIVKSFTLAYPEIEWRMVN---DDEELFNFKNNDVLERLNFYYGDDFASSLIEVAEQNDY 229
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I GY+ P K QY +IN R V LL + ++ G
Sbjct: 230 LPIHGYLGKPALQKKRKLEQYFFINRRLVQN---RMLLQAVQQAY--------------G 272
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
+ P LL L S D+ P K + F D ER +RS + I
Sbjct: 273 DLLVERQTPFVLLFLTIDPSRIDVNVHPAKLEIRFDD--------ERQVRSMFYPVI 321
>gi|76787614|ref|YP_330627.1| DNA mismatch repair protein [Streptococcus agalactiae A909]
gi|406710409|ref|YP_006765135.1| DNA mismatch repair protein HexB [Streptococcus agalactiae
GD201008-001]
gi|424048528|ref|ZP_17786079.1| DNA mismatch repair protein [Streptococcus agalactiae ZQ0910]
gi|123744498|sp|Q3JYM6.1|MUTL_STRA1 RecName: Full=DNA mismatch repair protein MutL
gi|76562671|gb|ABA45255.1| DNA mismatch repair protein HexB [Streptococcus agalactiae A909]
gi|389649993|gb|EIM71464.1| DNA mismatch repair protein [Streptococcus agalactiae ZQ0910]
gi|406651294|gb|AFS46695.1| DNA mismatch repair protein HexB [Streptococcus agalactiae
GD201008-001]
Length = 657
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 169/355 (47%), Gaps = 41/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 1 MSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + VL RH ATSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 61 GEGMTSEDAVLSLRRH-ATSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++
Sbjct: 117 QGKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
H + V R++L HP+V+F I+ E+ T + + +G+ + E++
Sbjct: 170 HII-DIVNRLSLAHPEVAFTLIN--DGKEMTKTSGTGDLRQAIAGIYGLNTAKKMIEISN 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 227 ADLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRS 267
Query: 295 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 268 ILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISSAI 322
>gi|253577911|ref|ZP_04855183.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850229|gb|EES78187.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 663
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 174/335 (51%), Gaps = 39/335 (11%)
Query: 27 VVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSGISRDGLVLLGERHAATSKLGHLA 85
+V+ELV N++DAGAT V V + +++ D+G G+ RD + L RHA TSK+ +
Sbjct: 7 IVKELVENAIDAGATAVTVEITDGGKKMIRITDNGGGMERDQVPLAFLRHA-TSKIEKVE 65
Query: 86 DMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKGSKCLYLGIDDERKD 145
D++ I + GFRGEAL+SI+ V+ +E+ITK +G R V+ G G+ + +D
Sbjct: 66 DLEH---IASLGFRGEALSSIAAVAQVELITKTPSALSGVRYVING------GVQESLED 116
Query: 146 V----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKVSFKFIDMESE 201
+ GTT + R+LFYN P R K+++S + + V + ++AL HP++SFK+I +++
Sbjct: 117 MGAPEGTTFLVRNLFYNTPARSKFLKSDTTEG-NYVSTLMEQLALSHPEISFKYI--QNK 173
Query: 202 DELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISSPYDSISVKAFQYVY 261
L T + + ++ + +G + L EV+ + ++I G++ P S + F+ Y
Sbjct: 174 QVKLHTSGNYNVKDVIYNIYGRDITKALLEVSYENDFMKIEGFVGKPEISRGNRTFENYY 233
Query: 262 INSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYD 321
IN R+V I K D++K GFL + P L+++ + D
Sbjct: 234 INGRFVKNRIIAK---------GIEDAYK---GFLMQHK-----FPFVSLHIQMEGNDLD 276
Query: 322 LTFDPLKTHVVF----KDWEPVLAFIERAIRSAWM 352
+ P K V F + ++ V + +A+ + M
Sbjct: 277 VNVHPSKMEVRFARGTEVYDAVYETVHKALTTREM 311
>gi|257439841|ref|ZP_05615596.1| DNA mismatch repair protein MutL [Faecalibacterium prausnitzii
A2-165]
gi|257197750|gb|EEU96034.1| DNA mismatch repair domain protein [Faecalibacterium prausnitzii
A2-165]
Length = 716
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 168/355 (47%), Gaps = 29/355 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ L + + +G V+ VV+EL+ N++DAGA+++ V + +++ D+
Sbjct: 1 MAVIHVLDKHTAELIAAGEVVERPASVVKELLENAIDAGASQITVTIESGGVKLIEISDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI + + RHA TSK+ DD I T GFRGEALASI+ V+ +E++T+
Sbjct: 61 GSGIEAEYIPTAFIRHA-TSKI---RTEDDLNHIHTLGFRGEALASIASVARVEVLTRTE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
++G + L + + VGTT+ +DLFYN P R K+++ + V
Sbjct: 117 NDECASVYRIEGGEDYPL--EPGARGVGTTIRVQDLFYNTPARMKFLKKDSSEGTF-VAD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPL-ALLISSFGIEDFSFLDEVNANDGA 238
V +AL HP+VSFKF+ E +L L + + G E L E++ +G
Sbjct: 174 IVAHVALSHPEVSFKFV---REGKLQYVTPGDGKLRSAAYAVLGREFSRDLMELDNQEGV 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ G I+ P + ++ QY YIN RYV ++ + +F + ++G
Sbjct: 231 YRVWGLITQPRSCRASRSMQYFYINGRYVRN---RTMMAAMETAFKGTT--------MQG 279
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
K P +L L P L D+ P KT V F + + A++ A +
Sbjct: 280 K------FPGGILLLEMPADLVDVNVHPAKTEVRFARENDIFDLVYHAVKLALAQ 328
>gi|315640094|ref|ZP_07895217.1| DNA mismatch repair protein HexB [Enterococcus italicus DSM 15952]
gi|315484141|gb|EFU74614.1| DNA mismatch repair protein HexB [Enterococcus italicus DSM 15952]
Length = 656
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 165/329 (50%), Gaps = 36/329 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSG 62
I L E + N + +G V+ VV+ELV N++DAG+T++ + + ++VVD+G G
Sbjct: 3 IKELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDILLEDAGLKKIQVVDNGEG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I+ + + +RHA TSK+ H AD+ I T GFRGEAL SI+ VS + I T + G
Sbjct: 63 IADEDVENAFKRHA-TSKIHHQADL---FRIRTLGFRGEALPSIASVSEMTIETASQGAT 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
NG ++G L + RK GT +V +LF+N P R KY+++ + L ++ V
Sbjct: 119 NGSIVHLQGGTILSHKMGPLRK--GTKIVVENLFFNTPARLKYVKTFQTE-LANIGDIVN 175
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP V+F+ + +++ T + + +G++ + + A+D +I
Sbjct: 176 RLALSHPSVAFRLV--HDGNKMTQTAGNGDLKQTIAGIYGLQTAKKMLVIAADDLDFQIK 233
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GYIS P + + + + + IN R++ ++ N ++G SK
Sbjct: 234 GYISLPEVTRANRNYLSLIINGRFI-------------------KNYALNKAIIQGYGSK 274
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHV 331
L+ R P ++ ++T DPL V
Sbjct: 275 -------LMVGRFPIAIIEITMDPLLVDV 296
>gi|420260835|ref|ZP_14763504.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404511673|gb|EKA25539.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 635
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 187/381 (49%), Gaps = 37/381 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGA+++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARHA-TSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQN 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIAL V+ I++ +L+ S L S G ++ G
Sbjct: 177 RIALARFDVA---INLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S ++ QY Y+N+R + +L+NH +A LK
Sbjct: 234 LTIRGWVADPAASRTLSEMQYCYVNNRMMRD----RLINHAIR--------QAYQDLLKD 281
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 282 DQQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQTAT 334
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+++ ED E +E+ R+Q
Sbjct: 335 PLLNIN--EDGE-EIEAPRWQ 352
>gi|225871418|ref|YP_002747365.1| DNA mismatch repair protein [Streptococcus equi subsp. equi 4047]
gi|254766176|sp|C0MAS4.1|MUTL_STRE4 RecName: Full=DNA mismatch repair protein MutL
gi|225700822|emb|CAW95527.1| DNA mismatch repair protein MutL [Streptococcus equi subsp. equi
4047]
Length = 660
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 191/414 (46%), Gaps = 46/414 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M TI LPE + N + +G V+ VV+ELV N++DA ++++ V + +++ D+
Sbjct: 1 MTTIIELPEVLANQIAAGEVIERPASVVKELVENAIDAKSSQITVEIEESGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + L L RH ATSK+ +D+ I T GFRGEAL S++ +S L I T
Sbjct: 61 GEGMSHEDLPLSLRRH-ATSKIKSQSDL---FRIRTLGFRGEALPSVASISKLTIKTATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G V G K L + VGT + +LFYN P R KYM+S ++ H V
Sbjct: 117 DAEHGSILVASGGKIEQL--EAVSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHVV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPL-ALLISSFGIEDFSFLDEVNANDGA 238
V R++L HP+++F I S+ + L S + L L +G+ + ++++ D
Sbjct: 174 VVNRLSLAHPEIAFTLI---SDGKQLTQTSGAGDLRQALAGIYGLNTAKKMIDISSADLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
E+ G++S P + + + + + IN RY+ ++ N L G
Sbjct: 231 FEVGGFVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDG 271
Query: 299 KRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
SK P +++++ L D+ P K + ++A I AI + ++
Sbjct: 272 YGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEIRISKERELMALISTAISESLREQ-- 329
Query: 357 HDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC 406
D++ DA L S +S Q+S L S L Q++ F KE
Sbjct: 330 ------DLIPDALENLARSSTRSFSKPEQTSLPLQPSQLY-YDPQKNDFFTKET 376
>gi|450072840|ref|ZP_21848813.1| DNA mismatch repair protein [Streptococcus mutans M2A]
gi|449210721|gb|EMC11156.1| DNA mismatch repair protein [Streptococcus mutans M2A]
Length = 651
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 166/353 (47%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T + L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGNLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|336432332|ref|ZP_08612167.1| hypothetical protein HMPREF0991_01286 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336018669|gb|EGN48406.1| hypothetical protein HMPREF0991_01286 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 664
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 152/290 (52%), Gaps = 22/290 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ +V+ELV NS+DA A V V + G+ ++V
Sbjct: 1 MPQIQVLDQITIDKIAAGEVIERPASIVKELVENSIDAKAASVTVEIQDGGIS--LIRVT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+GSGI R+ + RH+ TSK+ + D+ I + GFRGEAL+SIS V+ E+ITK
Sbjct: 59 DNGSGIEREDIRNAFLRHS-TSKIRKVEDL---AHIASLGFRGEALSSISAVTRTELITK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKV 173
G R V++G G++ +D GTT + R LFYN P RRK++++ +
Sbjct: 115 TKEDTFGTRYVIEG------GVEQSLEDAGAPDGTTFLVRQLFYNVPARRKFLKTPMTEA 168
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 233
H V+ ++R+AL HP+V+F FI+ + + T + ++ S +G E + L E++
Sbjct: 169 GH-VQDLLMRLALSHPEVAFTFIN--NGQTKMRTSGNGKLKDVIYSIYGREAAANLIELD 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
+ L + GY+ P + + F+ ++N RYV + K + F
Sbjct: 226 YSMDGLVMKGYLGKPVITRGNRNFENYFVNGRYVKNAMLSKAIEDAYKDF 275
Score = 41.6 bits (96), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 19/198 (9%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
K++ QV + + V +L +IDQHAA ER+ L E K + + YL L L
Sbjct: 476 KLIGQVFETYWLVEFENSLYIIDQHAAHERV-LYERTLKEMKNREFTAQYLSPPIILSLS 534
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLS 1286
Q+L ++ G+ I G + + A+P +FG+
Sbjct: 535 MQEAQVLNENMDRFTRIGF--EIEPFGGEEY--------------AVRAIPDNLFGIA-K 577
Query: 1287 DVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
LLE L LAD +S TP + + S +C+ A+ + L E ++ EL
Sbjct: 578 KELLLEMLDDLADGISTSMTPELIDEKVASMSCKAAVKGNNRLSAQEADALIGELLLLEN 637
Query: 1347 CFQCAHGRPTTVPLVNLE 1364
+ C HGRPT + + E
Sbjct: 638 PYHCPHGRPTIIAMTQRE 655
>gi|153947725|ref|YP_001402609.1| DNA mismatch repair protein [Yersinia pseudotuberculosis IP 31758]
gi|167012380|sp|A7FMY1.1|MUTL_YERP3 RecName: Full=DNA mismatch repair protein MutL
gi|152959220|gb|ABS46681.1| DNA mismatch repair protein MutL [Yersinia pseudotuberculosis IP
31758]
Length = 635
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 173/350 (49%), Gaps = 33/350 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
IS+D L L RH ATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISKDDLALALARH-ATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLA----LLISSFGIEDFSFLDEVNANDGA 238
RIAL V+ I++ +L+ ++ A L S G + G
Sbjct: 177 RIALARFDVA---INLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S ++ QY Y+N+R + +L+NH A +
Sbjct: 234 LNIHGWVADPAASHTLSEMQYCYVNNRMMRD----RLINH------------AIRQAYQD 277
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
+ + +Q PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 278 RLNDAQQ-PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|154504381|ref|ZP_02041119.1| hypothetical protein RUMGNA_01885 [Ruminococcus gnavus ATCC 29149]
gi|153795310|gb|EDN77730.1| DNA mismatch repair domain protein [Ruminococcus gnavus ATCC 29149]
Length = 664
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 152/290 (52%), Gaps = 22/290 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ +V+ELV NS+DA A V V + G+ ++V
Sbjct: 1 MPQIQVLDQITIDKIAAGEVIERPASIVKELVENSIDAKAASVTVEIQDGGIS--LIRVT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+GSGI R+ + RH+ TSK+ + D+ I + GFRGEAL+SIS V+ E+ITK
Sbjct: 59 DNGSGIEREDIRNAFLRHS-TSKIRKVEDL---AHIASLGFRGEALSSISAVTRTELITK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKV 173
G R V++G G++ +D GTT + R LFYN P RRK++++ +
Sbjct: 115 TKEDTFGTRYVIEG------GVEQSLEDAGAPDGTTFLVRQLFYNVPARRKFLKTPMTEA 168
Query: 174 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 233
H V+ ++R+AL HP+V+F FI+ + + T + ++ S +G E + L E++
Sbjct: 169 GH-VQDLLMRLALSHPEVAFTFIN--NGQTKMRTSGNGKLKDVIYSIYGREAAANLIELD 225
Query: 234 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 283
+ L + GY+ P + + F+ ++N RYV + K + F
Sbjct: 226 YSMDGLVMKGYLGKPVITRGNRNFENYFVNGRYVKNAMLSKAIEDAYKDF 275
Score = 40.8 bits (94), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 23/200 (11%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
K++ QV + + V +L +IDQHAA ER+ L E K + + YL L L
Sbjct: 476 KLIGQVFETYWLVEFENSLYIIDQHAAHERV-LYERTLKEMKNREFTAQYLSPPIILSLS 534
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLS 1286
Q+L ++ G+ I G + + A+P +FG+
Sbjct: 535 MQEAQVLNENMDRFTRIGF--EIEPFGGEEY--------------AVRAIPDNLFGIAKK 578
Query: 1287 DVDLLEFLQQLADTDGSST--TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1344
++ L TDG ST TP + + S +C+ A+ + L E ++ EL
Sbjct: 579 ELLLE---MLDDLTDGISTSMTPELIDEKVASMSCKAAVKGNNRLSAQEADALIGELLLL 635
Query: 1345 SLCFQCAHGRPTTVPLVNLE 1364
+ C HGRPT + + E
Sbjct: 636 ENPYHCPHGRPTIIAMTQRE 655
>gi|404418528|ref|ZP_11000295.1| DNA mismatch repair protein [Staphylococcus arlettae CVD059]
gi|403489121|gb|EJY94699.1| DNA mismatch repair protein [Staphylococcus arlettae CVD059]
Length = 649
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 182/405 (44%), Gaps = 47/405 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
MG I L ++ N + +G V+ VV+EL+ N++DA AT++ + V GV + ++VV
Sbjct: 1 MGKIKELQTSLANKIAAGEVVERPGSVVKELLENAIDAQATEINIAVEQSGVSS--IRVV 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G+GIS D L L+ RHA TSKL D DD I T GFRGEALASIS V+ + + +
Sbjct: 59 DNGTGISEDDLALVFHRHA-TSKLD---DDDDLFHIRTLGFRGEALASISSVAKVTLKSC 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
V G+ L + GT ++ LFYN P R KY++S + L +
Sbjct: 115 TDNLEGHEVYVENGA---ILQQKPAKAKQGTDILVESLFYNTPARLKYIKSLYTE-LGKI 170
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
V R+A+ HP + F E++ T S ++ +G++ L + +
Sbjct: 171 TDIVNRMAMSHPNIRFTL--TADGKEIIKTNGSGRTNEVMAEIYGMKVAKDLVHIQGDTS 228
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ G+++ P S S K + ++IN RY+ ++ N L+
Sbjct: 229 DYHLEGFVAKPEHSRSNKHYISIFINGRYIR-------------------NFVLNKAILE 269
Query: 298 GKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
G + P LN+ L D+ P K V E + I IR A+ KI
Sbjct: 270 GYHTLLTIGRYPICYLNIEMDPILVDVNVHPTKLEVRLSKEEQLYKLIVEKIREAFHDKI 329
Query: 356 A--HDSFD--------VDMLEDAELPLES-SRFQSHQSSTHLHSS 389
H+ D +D E ++ E ++ HQ+ST S+
Sbjct: 330 LIPHNDLDKVNKKNKVLDQFEQQKIDFEQRQQYNDHQASTEATSN 374
>gi|408492450|ref|YP_006868819.1| DNA mismatch repair protein MutL [Psychroflexus torquis ATCC
700755]
gi|408469725|gb|AFU70069.1| DNA mismatch repair protein MutL [Psychroflexus torquis ATCC
700755]
Length = 615
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 173/352 (49%), Gaps = 40/352 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDA AT V + + ++VVD+GSG
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELMENAVDANATLVSLIIKEGGKTLIQVVDNGSG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ L ERHA TSK+ +D + T GFRGEALASI+ VS +++ TK
Sbjct: 65 MTDTDARLSFERHA-TSKI---KAAEDLFHLHTKGFRGEALASIAAVSHVDMKTKTEVEE 120
Query: 123 NGYRKVMKGSK------CLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +++GS C+ +GT++ ++LF+N P RR +++S+ + H
Sbjct: 121 VGTHLMVEGSHITQQEPCV--------TPIGTSISVKNLFFNIPARRNFLKSASVEHKHV 172
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R+ALVHP V+FKFI +SE L ++ ++ G + L V
Sbjct: 173 IDEF-QRVALVHPSVAFKFIHNDSE---LFNLPVANFRHRIVGVMGSKMNEKLVPVKEET 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
+++ G++ P + + Q+ ++N R++ H L+H +S A G L
Sbjct: 229 DLIQLYGFVGKPEFAKKSRGEQFFFVNDRFIK----HPYLHHAVSS--------AFEGLL 276
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
K K A P Y L L+ D+ P KT V F + + + + +++
Sbjct: 277 KDK-----AYPTYFLYLQVNPESIDINIHPTKTEVKFDNEHAIYSILRSSVK 323
>gi|225869420|ref|YP_002745368.1| DNA mismatch repair protein MutL [Streptococcus equi subsp.
zooepidemicus]
gi|259511151|sp|C0MGC4.1|MUTL_STRS7 RecName: Full=DNA mismatch repair protein MutL
gi|225702696|emb|CAX00809.1| DNA mismatch repair protein MutL [Streptococcus equi subsp.
zooepidemicus]
Length = 660
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 191/414 (46%), Gaps = 46/414 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M TI LPE + N + +G V+ VV+ELV N++DA ++++ V + +++ D+
Sbjct: 1 MTTIIELPEVLANQIAAGEVIERPASVVKELVENAIDAKSSQITVEIEESGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + L L RH ATSK+ +D+ I T GFRGEAL S++ +S L I T
Sbjct: 61 GEGMSHEDLPLSLRRH-ATSKIKSQSDL---FRIRTLGFRGEALPSVASISKLTIKTATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G V G K L + VGT + +LFYN P R KYM+S ++ H V
Sbjct: 117 EAEHGSILVASGGKIEQL--EAVSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHVV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPL-ALLISSFGIEDFSFLDEVNANDGA 238
V R++L HP+++F I S+ + L S + L L +G+ + ++++ D
Sbjct: 174 VVNRLSLAHPEIAFTLI---SDGKQLTQTSGTGDLRQALAGIYGLNTAKKMIDISSADLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
E+ G++S P + + + + + IN RY+ ++ N L G
Sbjct: 231 FEVGGFVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDG 271
Query: 299 KRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
SK P +++++ L D+ P K + ++A I AI + ++
Sbjct: 272 YGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEIRISKERELMALISTAISESLREQ-- 329
Query: 357 HDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC 406
D++ DA L S +S Q+S L S L Q++ F KE
Sbjct: 330 ------DLIPDALENLARSSTRSFSKPEQTSLPLQPSQLY-YDPQKNDFFTKET 376
>gi|22124542|ref|NP_667965.1| DNA mismatch repair protein [Yersinia pestis KIM10+]
gi|45440381|ref|NP_991920.1| DNA mismatch repair protein [Yersinia pestis biovar Microtus str.
91001]
gi|51594775|ref|YP_068966.1| DNA mismatch repair protein [Yersinia pseudotuberculosis IP 32953]
gi|108809903|ref|YP_653819.1| DNA mismatch repair protein [Yersinia pestis Antiqua]
gi|108813460|ref|YP_649227.1| DNA mismatch repair protein [Yersinia pestis Nepal516]
gi|145600850|ref|YP_001164926.1| DNA mismatch repair protein [Yersinia pestis Pestoides F]
gi|150260585|ref|ZP_01917313.1| DNA mismatch repair protein [Yersinia pestis CA88-4125]
gi|165926767|ref|ZP_02222599.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165936468|ref|ZP_02225036.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011848|ref|ZP_02232746.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166213990|ref|ZP_02240025.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167400705|ref|ZP_02306214.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167418954|ref|ZP_02310707.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167423238|ref|ZP_02314991.1| DNA mismatch repair protein MutL [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167470469|ref|ZP_02335173.1| DNA mismatch repair protein MutL [Yersinia pestis FV-1]
gi|170026016|ref|YP_001722521.1| DNA mismatch repair protein [Yersinia pseudotuberculosis YPIII]
gi|186893782|ref|YP_001870894.1| DNA mismatch repair protein [Yersinia pseudotuberculosis PB1/+]
gi|218927574|ref|YP_002345449.1| DNA mismatch repair protein [Yersinia pestis CO92]
gi|229836631|ref|ZP_04456797.1| methyl-directed mismatch repair protein [Yersinia pestis Pestoides
A]
gi|229840243|ref|ZP_04460402.1| methyl-directed mismatch repair protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842321|ref|ZP_04462476.1| methyl-directed mismatch repair protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229903940|ref|ZP_04519053.1| methyl-directed mismatch repair protein [Yersinia pestis Nepal516]
gi|270489072|ref|ZP_06206146.1| DNA mismatch repair protein, C-terminal domain protein [Yersinia
pestis KIM D27]
gi|294502480|ref|YP_003566542.1| DNA mismatch repair protein [Yersinia pestis Z176003]
gi|384120914|ref|YP_005503534.1| DNA mismatch repair protein [Yersinia pestis D106004]
gi|384137647|ref|YP_005520349.1| DNA mismatch repair protein [Yersinia pestis A1122]
gi|420582582|ref|ZP_15076881.1| DNA mismatch repair protein mutL [Yersinia pestis PY-08]
gi|420614845|ref|ZP_15105859.1| DNA mismatch repair MutL family protein [Yersinia pestis PY-14]
gi|420652032|ref|ZP_15139291.1| DNA mismatch repair protein mutL [Yersinia pestis PY-34]
gi|420662815|ref|ZP_15148967.1| DNA mismatch repair protein mutL [Yersinia pestis PY-42]
gi|420700089|ref|ZP_15182292.1| DNA mismatch repair MutL family protein [Yersinia pestis PY-54]
gi|420782054|ref|ZP_15253889.1| DNA mismatch repair protein mutL [Yersinia pestis PY-89]
gi|420824657|ref|ZP_15292105.1| DNA mismatch repair protein mutL [Yersinia pestis PY-98]
gi|420851371|ref|ZP_15316194.1| DNA mismatch repair protein mutL [Yersinia pestis PY-103]
gi|421761799|ref|ZP_16198599.1| DNA mismatch repair protein [Yersinia pestis INS]
gi|20455102|sp|Q8ZIW4.1|MUTL_YERPE RecName: Full=DNA mismatch repair protein MutL
gi|81825958|sp|Q66FB7.1|MUTL_YERPS RecName: Full=DNA mismatch repair protein MutL
gi|123073158|sp|Q1CEF3.1|MUTL_YERPN RecName: Full=DNA mismatch repair protein MutL
gi|123245400|sp|Q1C0Z8.1|MUTL_YERPA RecName: Full=DNA mismatch repair protein MutL
gi|166232114|sp|A4TRP1.1|MUTL_YERPP RecName: Full=DNA mismatch repair protein MutL
gi|238688465|sp|B1JMP1.1|MUTL_YERPY RecName: Full=DNA mismatch repair protein MutL
gi|238691358|sp|B2K202.1|MUTL_YERPB RecName: Full=DNA mismatch repair protein MutL
gi|21957340|gb|AAM84216.1|AE013665_5 DNA mismatch repair protein [Yersinia pestis KIM10+]
gi|45435237|gb|AAS60797.1| DNA mismatch repair protein [Yersinia pestis biovar Microtus str.
91001]
gi|51588057|emb|CAH19663.1| DNA mismatch repair protein [Yersinia pseudotuberculosis IP 32953]
gi|108777108|gb|ABG19627.1| DNA mismatch repair protein MutL [Yersinia pestis Nepal516]
gi|108781816|gb|ABG15874.1| DNA mismatch repair protein MutL [Yersinia pestis Antiqua]
gi|115346185|emb|CAL19053.1| DNA mismatch repair protein [Yersinia pestis CO92]
gi|145212546|gb|ABP41953.1| DNA mismatch repair protein MutL [Yersinia pestis Pestoides F]
gi|149289993|gb|EDM40070.1| DNA mismatch repair protein [Yersinia pestis CA88-4125]
gi|165915584|gb|EDR34193.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis
str. IP275]
gi|165921390|gb|EDR38614.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989207|gb|EDR41508.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166204785|gb|EDR49265.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962948|gb|EDR58969.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050073|gb|EDR61481.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167057408|gb|EDR67154.1| DNA mismatch repair protein MutL [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169752550|gb|ACA70068.1| DNA mismatch repair protein MutL [Yersinia pseudotuberculosis
YPIII]
gi|186696808|gb|ACC87437.1| DNA mismatch repair protein MutL [Yersinia pseudotuberculosis
PB1/+]
gi|229679710|gb|EEO75813.1| methyl-directed mismatch repair protein [Yersinia pestis Nepal516]
gi|229690631|gb|EEO82685.1| methyl-directed mismatch repair protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696609|gb|EEO86656.1| methyl-directed mismatch repair protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706315|gb|EEO92323.1| methyl-directed mismatch repair protein [Yersinia pestis Pestoides
A]
gi|262360510|gb|ACY57231.1| DNA mismatch repair protein [Yersinia pestis D106004]
gi|270337576|gb|EFA48353.1| DNA mismatch repair protein, C-terminal domain protein [Yersinia
pestis KIM D27]
gi|294352939|gb|ADE63280.1| DNA mismatch repair protein [Yersinia pestis Z176003]
gi|342852776|gb|AEL71329.1| DNA mismatch repair protein [Yersinia pestis A1122]
gi|391466296|gb|EIR24383.1| DNA mismatch repair protein mutL [Yersinia pestis PY-08]
gi|391501358|gb|EIR55773.1| DNA mismatch repair MutL family protein [Yersinia pestis PY-14]
gi|391530972|gb|EIR82507.1| DNA mismatch repair protein mutL [Yersinia pestis PY-34]
gi|391546845|gb|EIR96798.1| DNA mismatch repair protein mutL [Yersinia pestis PY-42]
gi|391591919|gb|EIS36425.1| DNA mismatch repair MutL family protein [Yersinia pestis PY-54]
gi|391667357|gb|EIT02701.1| DNA mismatch repair protein mutL [Yersinia pestis PY-89]
gi|391704789|gb|EIT36417.1| DNA mismatch repair protein mutL [Yersinia pestis PY-98]
gi|391734005|gb|EIT62317.1| DNA mismatch repair protein mutL [Yersinia pestis PY-103]
gi|411178121|gb|EKS48133.1| DNA mismatch repair protein [Yersinia pestis INS]
Length = 635
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 173/350 (49%), Gaps = 33/350 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
IS+D L L RH ATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISKDDLALALARH-ATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLA----LLISSFGIEDFSFLDEVNANDGA 238
RIAL V+ I++ +L+ ++ A L S G + G
Sbjct: 177 RIALARFDVA---INLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S ++ QY Y+N+R + +L+NH A +
Sbjct: 234 LNIHGWVADPAASHTLSEMQYCYVNNRMMRD----RLINH------------AIRQAYQD 277
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
+ + +Q PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 278 RLNDAQQ-PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|212639350|ref|YP_002315870.1| DNA mismatch repair protein [Anoxybacillus flavithermus WK1]
gi|226723025|sp|B7GIA3.1|MUTL_ANOFW RecName: Full=DNA mismatch repair protein MutL
gi|212560830|gb|ACJ33885.1| DNA mismatch repair enzyme (predicted ATPase) [Anoxybacillus
flavithermus WK1]
Length = 608
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 169/355 (47%), Gaps = 28/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I +L +A+ N + +G V+ VV+ELV N++DA +T + V + ++VVD+
Sbjct: 1 MGKIRKLDDALANKIAAGEVVERPASVVKELVENAIDAHSTIIEVELEEAGLAKIRVVDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G + L ERH ATSK+ AD+ I T GFRGEAL SI+ VS LE+ T
Sbjct: 61 GDGFEEEDCFLAFERH-ATSKIKDEADL---FRIRTLGFRGEALPSIASVSHLELKTST- 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G V+KG + + G RK GT + LF+N P R KYM++ ++ H V
Sbjct: 116 GEGPGTWLVLKGGELVQHGRTSSRK--GTDITVSHLFFNTPARLKYMKTIHTELGHVV-D 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
+ R+AL HP +SF+ + +L T + +L + +G++ + ++A
Sbjct: 173 VINRLALAHPHISFRL--THNGKQLFYTNGNGDVRQVLAAIYGLDVAKKMIAIHAETLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
I GY++ P + + + + +N RY+ ++K + + + L
Sbjct: 231 TIDGYVALPEVTRASRNYMTTIVNGRYIKNYSLYKAIE------------EGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
R P LN+ L D+ P K V F + +++ IR ++ KK
Sbjct: 279 RH-----PITFLNIMMDPLLIDVNVHPAKLEVRFSKETELNELVQQTIRQSFQKK 328
>gi|225419752|ref|ZP_03762055.1| hypothetical protein CLOSTASPAR_06090, partial [Clostridium
asparagiforme DSM 15981]
gi|225041589|gb|EEG51835.1| hypothetical protein CLOSTASPAR_06090 [Clostridium asparagiforme
DSM 15981]
Length = 326
Score = 127 bits (320), Expect = 4e-26, Method: Composition-based stats.
Identities = 97/351 (27%), Positives = 169/351 (48%), Gaps = 27/351 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
M I L + N + +G V+ VV+EL+ N++DA AT V + + ++V D+
Sbjct: 1 MANITVLDQNTINKIAAGEVIERPASVVKELLENAIDAQATAVTIEIKEGGTTLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI +D + L RHA TSK+ ++D + + GFRGEALASI+ V+ +E+ITK
Sbjct: 61 GCGIPKDQISLAFLRHA-TSKI---KSVEDLFTVSSLGFRGEALASIAAVAQVELITKTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G+R ++G G+++ GTT ++R+LFYN P R+K+++ P V
Sbjct: 117 DSLTGFRYQIEGGT--ERGLEEVGAPDGTTFIARNLFYNTPARKKFLK-RPVTEGAYVAD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V +IAL HP++S +FI ++ L T + + L+ + +G E + L ++ +
Sbjct: 174 LVEKIALSHPEISIRFI--QNNQNKLYTSGNHNLRDLVYTVYGREVTANLLPIDVQAQDI 231
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++SG+I P + + ++ +IN RY+ I + + + +
Sbjct: 232 KVSGFIGKPLIARGNRNYENYFINGRYIKSSIISRAIEEAYKPYMMQHKY---------- 281
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P LL+ D+ P K + F+D E + + A+ A
Sbjct: 282 -------PFTLLHFSIEPEFLDVNVHPTKMELRFRDGELMFKTVLNAVGEA 325
>gi|162418239|ref|YP_001605281.1| DNA mismatch repair protein [Yersinia pestis Angola]
gi|238687244|sp|A9QYN3.1|MUTL_YERPG RecName: Full=DNA mismatch repair protein MutL
gi|162351054|gb|ABX85002.1| DNA mismatch repair protein MutL [Yersinia pestis Angola]
Length = 635
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 173/350 (49%), Gaps = 33/350 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
IS+D L L RH ATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISKDDLALALARH-ATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLA----LLISSFGIEDFSFLDEVNANDGA 238
RIAL V+ I++ +L+ ++ A L S G + G
Sbjct: 177 RIALARFDVA---INLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S ++ QY Y+N+R + +L+NH A +
Sbjct: 234 LNIHGWVADPAASHTLSEMQYCYVNNRMMRD----RLINH------------AIRQAYQD 277
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
+ + +Q PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 278 RLNDAQQ-PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|153814909|ref|ZP_01967577.1| hypothetical protein RUMTOR_01124 [Ruminococcus torques ATCC 27756]
gi|145847940|gb|EDK24858.1| DNA mismatch repair domain protein [Ruminococcus torques ATCC
27756]
Length = 705
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 209/449 (46%), Gaps = 45/449 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ +V+ELV N++DA AT V V + G+ +++V
Sbjct: 14 MPHIQVLDQITIDKIAAGEVIERPASIVKELVENAIDAKATSVTVEIKDGGIS--FIRVT 71
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI D + RH+ TSK+ ++ I + GFRGEAL+SI+ V+ E+ITK
Sbjct: 72 DNGCGIEADEVRCAFLRHS-TSKI---RTAEELVSIHSLGFRGEALSSIAAVTRTEVITK 127
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
+G + V++G K L ++ GTT + LFYN P RRK++++ + H V
Sbjct: 128 TEEGQSGIKYVIEGGKETAL--EETGAPNGTTFLIHQLFYNIPARRKFLKTPVTEAGH-V 184
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ ++ +AL HP+VSF FI+ + E L T + ++ + +G E S L E++
Sbjct: 185 QDLLIHLALSHPEVSFLFIN--NGQEKLRTSGNGKLKDVIYNVYGREVTSNLLELDYKKD 242
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
L ISG++ P + + F+ ++N RYV + K L F +
Sbjct: 243 GLSISGFLGKPVITRGNRNFENFFVNGRYVKSAMLSKSLEDAYKDFTMQHKF-------- 294
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
P +L+ + L D+ P K + F+ + V + A+ +
Sbjct: 295 ---------PFAVLHFQVEGDLIDVNVHPTKMELRFQRQQEVYNTMYEAVHRRLL----- 340
Query: 358 DSFDVDMLEDAELPLESSRFQSHQSSTHL------HSSPLKNLAKQRDHMFHKECERITF 411
+ ++++ A +P + Q + S L ++ + K R+ M +E E++
Sbjct: 341 ---EPELIQTATVPDPADAAQKKKESPFLLKPKSIENTKYDPIEKIREKMQEREPEQVRE 397
Query: 412 QEFQKDPVELAEENTEMEFFSQPKHSSSL 440
+ + P ++ E+ + E K +S++
Sbjct: 398 KAQETKPEQVREKVQDEEQGQARKQTSAI 426
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 1185 TLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDW 1244
+L +IDQHAA ER+ E ++ S E S YL L L QLL+ ++
Sbjct: 534 SLYIIDQHAAHERVMYERTLKEMKSREYTS-QYLSPPIILSLSMQEAQLLEEHIDRFTRI 592
Query: 1245 GWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGS 1303
G+ I G + + AVP +FG+ ++ L+E + LAD +
Sbjct: 593 GF--EIEHFGGEEY--------------AVRAVPDNLFGIAKKEL-LMEMIDDLADGINT 635
Query: 1304 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
S TP + + S +C+ A+ + L E ++ EL + C HGRPT + +
Sbjct: 636 SMTPDLIDEKVASMSCKAAVKGNNRLSAKEVDALIGELLTLDNPYHCPHGRPTIIAMTKR 695
Query: 1364 E 1364
E
Sbjct: 696 E 696
>gi|395801869|ref|ZP_10481124.1| DNA mismatch repair protein MutL [Flavobacterium sp. F52]
gi|395436058|gb|EJG01997.1| DNA mismatch repair protein MutL [Flavobacterium sp. F52]
Length = 645
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 165/346 (47%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDA AT + + V+V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAVDAKATDIKLIIKDAGKSLVQVIDNGVG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ L RHA TSK+ D+ +GT GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MTVTDARLCFARHA-TSKIRQAEDL---FSLGTKGFRGEALASIAAIAHMEMKTKQDQDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G +++GSK + + K GT+ ++LF+N P RR +++S + H V
Sbjct: 121 LGTHIIIEGSKFISQEVAVLPK--GTSFAVKNLFFNIPARRNFLKSDTVEFRH-VMDEFQ 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP + F F SE L + ++S E L VN + I
Sbjct: 178 RVALAHPNIHFSFYHNGSEMYNLPAAGYRQRIVGIMSGKTNEK---LVPVNEETDIISIQ 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + + Q+ ++N R++ +H H S A +G LK
Sbjct: 235 GFVCKPEFAKKNRGEQFFFVNDRFIKSSYLH----HAVMS--------AYDGLLKDG--- 279
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+ P+Y L L+ P + D+ P KT + F D + + A + +I+
Sbjct: 280 --SQPSYFLYLQVPPNTIDINIHPTKTEIKFDDEQALYAILRASIK 323
>gi|417006481|ref|ZP_11945051.1| DNA mismatch repair protein [Streptococcus agalactiae FSL S3-026]
gi|341576662|gb|EGS27073.1| DNA mismatch repair protein [Streptococcus agalactiae FSL S3-026]
Length = 657
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 169/355 (47%), Gaps = 41/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 1 MSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + VL RH ATSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 61 GEGMTSEDAVLSLRRH-ATSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++
Sbjct: 117 QGKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
H + + R++L HP+V+F I+ E+ T + + +G+ + E++
Sbjct: 170 HII-DIINRLSLAHPEVAFTLIN--DGKEMTKTSGTGDLRQAIAGIYGLNTAKKMIEISN 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 227 ADLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRS 267
Query: 295 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 268 ILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISSAI 322
>gi|295100784|emb|CBK98329.1| DNA mismatch repair protein MutL [Faecalibacterium prausnitzii
L2-6]
Length = 717
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 166/352 (47%), Gaps = 29/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ L + + +G V+ VV+EL+ NS+DAGA+++ V + +++ D+
Sbjct: 1 MAEIHVLDKHTAELIAAGEVVERPASVVKELLENSIDAGASQITVSIESGGVRLIEISDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G+GI + RHA TSK+ DD T I T GFRGEALASI+ V+ +E++T+
Sbjct: 61 GTGIEAKYIPTAFIRHA-TSKI---RTEDDLTSIHTLGFRGEALASIASVARVEVLTRTE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
++G + I+ + VGTT+ DLF+N P R K+++ + V
Sbjct: 117 ADECASLYRIEGGE--EQPIEPGARGVGTTIRVYDLFFNTPARMKFLKKDSSEGTF-VAD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPL-ALLISSFGIEDFSFLDEVNANDGA 238
V +AL HP+VSFKFI E +L L + + G E L EV+ +G
Sbjct: 174 VVGHLALSHPEVSFKFI---REGKLQYVTPGDGQLRSAAYAVLGREFSRDLVEVDNREGV 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ G I+ P + ++ QY YIN RYV ++ + +F + ++G
Sbjct: 231 YRVWGLITQPRSCRASRSMQYFYINGRYVRN---RTMMAGMEMAFKGT--------MMQG 279
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
K P +L L P L D+ P KT V F + + A++ A
Sbjct: 280 K------FPGGILLLEMPADLVDVNVHPAKTEVRFARENDIFDLVYHAVKLA 325
Score = 42.4 bits (98), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 87/217 (40%), Gaps = 37/217 (17%)
Query: 1165 EDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQEL 1224
E + + ++ + +I G + +ID+HAA ER E+L + Y D +L
Sbjct: 529 EPLRYVGEIFRTYILAERGDEICIIDKHAAHERQLFEKL----------AAHYGDVPSQL 578
Query: 1225 VLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQ--------ITVITLLA 1276
+L + + I + + NL+LL+ + + L +
Sbjct: 579 LLEPL-----------------VVEISAEEKTALLTNLDLLESAGLEVSDFGGSSVCLRS 621
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1336
VP ++ L+E +LA + + VL+S +CR AI GD P E
Sbjct: 622 VPADVEQGSAEDLLVELAAKLAHGSRDALNERTEW-VLHSISCRAAIKAGDHTSPQELMA 680
Query: 1337 IVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1373
+ E++ + C HGRP + L E L KQ ++
Sbjct: 681 LAEKILSGEVPPFCPHGRPCVLKLTRKE-LEKQFGRI 716
>gi|124267220|ref|YP_001021224.1| DNA mismatch repair protein MutL [Methylibium petroleiphilum PM1]
gi|124259995|gb|ABM94989.1| DNA mismatch repair protein MutL [Methylibium petroleiphilum PM1]
Length = 604
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 164/338 (48%), Gaps = 33/338 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVV-DDGSG 62
I LP+ + + + +G V+ VV ELV N++DAGA ++ V + +V DDG+G
Sbjct: 14 IRELPDELVSQIAAGEVVERPASVVRELVDNALDAGAREIVVKLMAGGVRAILVEDDGAG 73
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I L L +RHA TSK+ A +D+ + T GFRGEALA+I+ VS L I ++ P
Sbjct: 74 IPASELPLALKRHA-TSKI---ASLDELENVSTMGFRGEALAAIAAVSELSIASRHADAP 129
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+ R + + + + VGT+V R+LF++ P RRK++++ ++ H + + V
Sbjct: 130 HAQRLDARSGELVPAA-----RGVGTSVEVRELFFSTPARRKFLKTDATELAHCL-EAVR 183
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDF-SFLDEVNANDGALEI 241
R AL P V F + E +LL +PL I EDF + EV A L I
Sbjct: 184 RHALARPDVGFA---VWHEGKLLAQW-RRAPLEQRIRDALGEDFMAHSREVTAQPTGLRI 239
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
SG I P + + QYVY+N R+V +L++H A L G R
Sbjct: 240 SGRIGLPDAARARADEQYVYVNGRHVRD----RLISH--------GLRTAYADVLHGGRQ 287
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV 339
P+Y+L + S D+ P K V F+D V
Sbjct: 288 -----PSYVLFIEIAPSRVDVNVHPTKIEVRFRDGREV 320
Score = 40.4 bits (93), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 71/189 (37%), Gaps = 17/189 (8%)
Query: 1168 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1227
+ L Q+ +I L ++D HAA ER+ E L+ + +S Q L++P
Sbjct: 416 RALAQLGGVYILAENRDGLVIVDMHAAHERVVYERLKAGLAGARIES-------QPLLIP 468
Query: 1228 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1287
I A + + L+L V+ L + P
Sbjct: 469 AIFPATAAEVATAEAQVETLARL----------GLDLTVLSSNVLALRSHPAALAGGDMV 518
Query: 1288 VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1347
L +LA D S + +L+S AC GA+ L E ++ ++++T
Sbjct: 519 ALARSVLAELARYDASHAIERAQHELLSSMACHGAVRANRRLSVEEMNALLRDMERTERA 578
Query: 1348 FQCAHGRPT 1356
QC HGRPT
Sbjct: 579 DQCNHGRPT 587
>gi|449886730|ref|ZP_21786395.1| DNA mismatch repair protein [Streptococcus mutans SA41]
gi|450076209|ref|ZP_21849746.1| DNA mismatch repair protein [Streptococcus mutans N3209]
gi|449212793|gb|EMC13144.1| DNA mismatch repair protein [Streptococcus mutans N3209]
gi|449253807|gb|EMC51745.1| DNA mismatch repair protein [Streptococcus mutans SA41]
Length = 651
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|304404424|ref|ZP_07386085.1| DNA mismatch repair protein MutL [Paenibacillus curdlanolyticus
YK9]
gi|304346231|gb|EFM12064.1| DNA mismatch repair protein MutL [Paenibacillus curdlanolyticus
YK9]
Length = 684
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 169/364 (46%), Gaps = 37/364 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVD 58
MG I L E + N + +G V+ VV+ELV N+VDAGAT + + + G N ++V+D
Sbjct: 1 MGNIRVLDEQLANQIAAGEVVERPASVVKELVENAVDAGATTIDLTIEEGGLNL-IRVID 59
Query: 59 DGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 118
+G+GI D + +RH ATSKL AD+ I + GFRGEAL SI+ VS + I+
Sbjct: 60 NGAGIEPDEIETAFQRH-ATSKLLSSADLFR---IASLGFRGEALPSIAAVSRVTCISSP 115
Query: 119 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G + V++G G + GT + RDLFYN P R KYM+S ++ H +
Sbjct: 116 TKDGLGKQLVIEGGTVQQSGPVSAPQ--GTEMSVRDLFYNTPARLKYMKSIQTELGH-IS 172
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
V RIAL HP ++F + +ELL T + L ++ + +G + V
Sbjct: 173 DYVNRIALAHPGIAFSL--KHNGNELLRTPGTGDRLQVIAAVYGTSTAKAMLPVEGETPD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++GY+S P + + + V +N RY+ S+ N L+G
Sbjct: 231 YVLTGYVSKPELTRANRNAITVIVNGRYI-------------------RSFLVNQALLQG 271
Query: 299 KRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
+ P L + SL D+ P K V F + IE++++ K +
Sbjct: 272 YHTLLPINRFPLVTLEIAMHPSLLDVNVHPSKMEVRFSKETELRELIEQSVK----KTLG 327
Query: 357 HDSF 360
D +
Sbjct: 328 RDRY 331
>gi|429118421|ref|ZP_19179185.1| DNA mismatch repair protein MutL [Cronobacter sakazakii 680]
gi|426327098|emb|CCK09922.1| DNA mismatch repair protein MutL [Cronobacter sakazakii 680]
Length = 635
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 180/381 (47%), Gaps = 38/381 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGA ++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGARRIDIDIERGGAKLIRIRDNGGG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RH ATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARH-ATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMEVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA---NDGAL 239
RIAL V+ ++P + S I +FL+ A G L
Sbjct: 177 RIALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEHALAIAWQHGDL 234
Query: 240 EISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 235 ALRGWVAEPKGTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQQ---- 285
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 286 --------PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAAN 336
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+ + E AE ++ RFQ
Sbjct: 337 ---PLSLNEPAE---DAPRFQ 351
>gi|365836705|ref|ZP_09378092.1| DNA mismatch repair protein [Hafnia alvei ATCC 51873]
gi|364563387|gb|EHM41196.1| DNA mismatch repair protein [Hafnia alvei ATCC 51873]
Length = 639
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 164/349 (46%), Gaps = 27/349 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I++D L L RHA TSK+ +DD I + GFRGEALAS+S VS L + ++ +
Sbjct: 63 INKDELALALARHA-TSKI---TSLDDLEAIMSLGFRGEALASVSSVSRLTMTSRTAEQN 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTTV DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTVKPAAHPVGTTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKF-IDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
RIAL V+ + + + + L S G E+ G L I
Sbjct: 177 RIALARFDVTIQLHHNGKMIRQYRAVKEDGQKDRRLGSICGTAFIQHALEIKWEHGDLAI 236
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
G+++ P S + QY Y+N R + KL+ H A D K +
Sbjct: 237 HGWVADPVGSRQLTEMQYSYVNGRMMRD----KLITH-AIRQAYQDQLKDDQQ------- 284
Query: 302 KSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 349
PAY+L L PH + D+ P K V F V FI +A+ S
Sbjct: 285 -----PAYVLYLTVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVIS 327
>gi|414564974|ref|YP_006043935.1| DNA mismatch repair protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338848039|gb|AEJ26251.1| DNA mismatch repair protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 660
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 191/414 (46%), Gaps = 46/414 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M TI LPE + N + +G V+ VV+ELV N++DA ++++ V + +++ D+
Sbjct: 1 MTTIIELPEVLANQIAAGEVIERPASVVKELVENAIDAKSSQITVEIEESGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + L L RH ATSK+ +D+ I T GFRGEAL S++ +S L I T
Sbjct: 61 GEGMSHEDLPLSLRRH-ATSKIKSQSDL---FRIRTLGFRGEALPSVASISKLTIKTATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G V G K L + VGT + +LFYN P R KYM+S ++ H V
Sbjct: 117 EAEHGSILVASGGKIEQL--EAVSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHVV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPL-ALLISSFGIEDFSFLDEVNANDGA 238
V R++L HP+++F I S+ + L S + L L +G+ + ++++ D
Sbjct: 174 VVNRLSLAHPEIAFTLI---SDGKQLTQTSGTGDLRQALAGIYGLNTAKKMIDISSADLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
E+ G++S P + + + + + IN RY+ ++ N L G
Sbjct: 231 FEVGGFVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDG 271
Query: 299 KRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
SK P +++++ L D+ P K + ++A I AI + ++
Sbjct: 272 YGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEIRISKERELMALISTAISESLREQ-- 329
Query: 357 HDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC 406
D++ DA L S +S Q+S L S L Q++ F KE
Sbjct: 330 ------DLIPDALENLARSSTRSFSKPEQTSLPLQPSQLY-YDPQKNDFFTKET 376
>gi|406829998|ref|ZP_11089592.1| DNA mismatch repair protein MutL [Schlesneria paludicola DSM 18645]
Length = 685
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 191/407 (46%), Gaps = 46/407 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDD 59
M I +L +V N + +G V+ V++EL+ NSVDA AT++ V V + +++VDD
Sbjct: 1 MSRIQQLSTSVINKIAAGEVIERPASVIKELLENSVDALATRIEVDVVAGGSELIRIVDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI D L+L HA TSK+ + DD G+ T GFRGEALAS+++VS L I ++
Sbjct: 61 GEGIHPDDLLLAVSSHA-TSKI---RNADDLFGVQTMGFRGEALASVAEVSRLRIRSRQA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERK---DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+G+ V+ + + R+ +GT + R+LF N PVRRK++++ + H
Sbjct: 117 DAAHGHELVVNLGEVV-----PPRECGCPLGTQIEVRNLFENTPVRRKFLKTVSTEFGH- 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTC-SSSSPLALLISSFGIEDFSFLDEVNAN 235
+ + R+AL + ++ + D+L+ +S PL L FG + L V ++
Sbjct: 171 ISEHFTRVALANSRLHMV---LRHNDKLVMELPASPKPLDRLRIFFGKDVADELIPVESD 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
G + + GY+ P S + + QY+++N R++ L + L + G
Sbjct: 228 QGGVRMWGYVGHPNTSKATRKMQYLFLNGRWITD---RSLFHALTEGY---------RGL 275
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
L R P L + P D+ P K V F+D + + + IRS ++
Sbjct: 276 LMVGRQ-----PVCFLYIELPPDRVDVNVHPTKVEVRFQDSQQLFRQLLAMIRSKFLS-- 328
Query: 356 AHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS---SPLKNLAKQRD 399
+D+ LP + + L SP++ + KQR+
Sbjct: 329 ------MDLQSQLRLPATPAGGSGGAAPGLLSGFSPSPVRPIEKQRE 369
Score = 49.7 bits (117), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 30/211 (14%)
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1231
QV ++ V + VIDQHA ERI E LR +VL+G +S L + V +
Sbjct: 497 QVHDCYLIVETPEGVTVIDQHALHERIMYEHLRTRVLAGSVESQRLLVPQPIEVTSKEAA 556
Query: 1232 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1291
LL++ + ++ G G F ++ R + L VDL
Sbjct: 557 MLLEH-RDSLERAGL-------GVEDFGNGTVIVNR-------------YPAMLRKVDLQ 595
Query: 1292 EFLQQLAD---TDGSSTTPPSVLR-----VLNSKACRGAIMFGDSLLPSECALIVEELKQ 1343
E ++ L D + GS+ R +L+ +C+ A+ G L P E ++ +
Sbjct: 596 ELVRDLIDKLESGGSAGVQSGARRDILDELLHMMSCKAAVKAGQRLSPEEIESLLMQRHL 655
Query: 1344 TSLCFQCAHGRPTTVPLVNLEALHKQIAQLN 1374
C HGRPT + L E L +Q +L
Sbjct: 656 VDDAHHCPHGRPTALSLSRAE-LDRQFGRLG 685
>gi|449999925|ref|ZP_21824800.1| DNA mismatch repair protein [Streptococcus mutans N29]
gi|449186345|gb|EMB88180.1| DNA mismatch repair protein [Streptococcus mutans N29]
Length = 651
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|374708567|ref|ZP_09713001.1| DNA mismatch repair protein [Sporolactobacillus inulinus CASD]
Length = 619
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 172/356 (48%), Gaps = 30/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I RL E + N + +G V+ VV+ELV N++DA A+ V + + +KV DD
Sbjct: 1 MGVIKRLSETLANKIAAGEVVERPASVVKELVENAIDAEASSVLIEIEEGGLKSMKVTDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G + + + ERH ATSK+ +D+ I T GFRGEAL SIS VS LE +T +
Sbjct: 61 GRGFAPEDCRIAFERH-ATSKIHEDSDL---FHIATLGFRGEALPSISAVSHLE-LTTSD 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G V++G + G+ R+ GT++ LFYN P R KY++S + L +
Sbjct: 116 GEHPGTHLVLQGGHVIADGLAQSRR--GTSIKVEGLFYNTPARLKYLKSIHTE-LGKMTD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDGA 238
V R+AL +P V F I E + + + S L+ +L + +G+ +
Sbjct: 173 VVNRMALAYPHVRFTLIH---EQKTIFQSNGSGQLSHVLAAIYGVRTAKAAFPFSGKSLD 229
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
++ G P S + + + Y++IN+R++ PI N + + + + G
Sbjct: 230 FKVEGLAVHPQISRAGRQYVYIFINNRFIRNYPI---FNSIMDGY--------HTLMMIG 278
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
+ P +L+++ SL D+ P K + + A I +IRSA+ ++
Sbjct: 279 R------YPICVLHIQMDPSLVDVNVHPAKLEARISKEKELCALISESIRSAFHRE 328
Score = 47.0 bits (110), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 22/188 (11%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGE-GKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDW 1244
L +IDQHAA ERI+ E R KV GE + V L Y+ + + + +++
Sbjct: 450 LYIIDQHAAQERIKYEFFREKV--GETAREVQQLLVPMTFDFSASEYETVTEYQDYLQEI 507
Query: 1245 GWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSS 1304
G N + G+RS + + + P + + + + QL +T G
Sbjct: 508 GL--NFESFGTRS--------------LIIRSYPTWLPEGREEEMINDIVHQLIET-GKV 550
Query: 1305 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV--N 1362
+ ++ AC+ +I L P E +++ L + F C HGRP V
Sbjct: 551 SIKKLREKLAKMMACKRSIKANHYLRPDEIQALLDSLSKAQDPFTCPHGRPVLVHFTPYE 610
Query: 1363 LEALHKQI 1370
+E + K+I
Sbjct: 611 MEKMFKRI 618
>gi|410495885|ref|YP_006905731.1| DNA mismatch repair protein mutL [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|410441045|emb|CCI63673.1| DNA mismatch repair protein mutL [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 660
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 192/417 (46%), Gaps = 50/417 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA +++V + + +++ D+
Sbjct: 1 MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQVTIDIEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + L L RHA TSK+ +D+ I T GFRGEAL S++ +S + I T
Sbjct: 61 GEGMSPEDLPLSLRRHA-TSKIKSQSDL---FRIRTLGFRGEALPSVASISKITIKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G V G + L ++ VGT + +LFYN P R KYM+S ++ H V
Sbjct: 117 EDNHGSLLVAIGGEIETL--EETSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
V R++L HP+VSF I S+ L S + L I+ +G+ + ++ D
Sbjct: 174 VVNRLSLAHPEVSFILI---SDGRQLTQTSGTGDLRQAIAGIYGLNTAKKMIAISNADLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
E+SGY+S P + + + + + IN RY+ ++ N L G
Sbjct: 231 FEVSGYVSLPELTRANRNYMTILINGRYI-------------------KNFLLNRAILDG 271
Query: 299 KRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
SK P +++++ L D+ P K V ++A I AI + ++
Sbjct: 272 YGSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKERELMALISTAISESLKEQ-- 329
Query: 357 HDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLKNLA----KQRDHMFHKECE 407
D++ DA L S+R S T L PL++ QR+ F KE +
Sbjct: 330 ------DLIPDALENLAKSSTRHFSKPEQTQL---PLQSKGLYYDPQRNDFFVKESD 377
>gi|400291072|ref|ZP_10793099.1| DNA mismatch repair protein [Streptococcus ratti FA-1 = DSM 20564]
gi|399921863|gb|EJN94680.1| DNA mismatch repair protein [Streptococcus ratti FA-1 = DSM 20564]
Length = 651
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 192/419 (45%), Gaps = 56/419 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ V + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPASVVKELVENAIDAASSQITVDIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ + + RH ATSK+ AD+ I T GFRGEAL SI+ VS L I T +
Sbjct: 61 GQGMEQADAAMSLHRH-ATSKIKSQADL---FRIRTLGFRGEALPSIASVSRLSIKTASD 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G + G K E+++ VGT + DLF+N P R KYM+S ++
Sbjct: 117 RESYGTFLLANGGKV-------EKEEAVSTPVGTKITVEDLFFNTPARLKYMKSLQAELA 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
H + + R++L HP+++F I+ EL+ T + + +G+ + E++
Sbjct: 170 HII-DVLNRLSLAHPEIAFTLIN--DGRELIRTSGNGDLRQAIAGIYGLNTAKKMIEISN 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
D E+SGYIS P + + + + + IN RY+ ++ N
Sbjct: 227 ADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRA 267
Query: 295 FLKGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 352
L G SK P +++++ L D+ P K V + ++ I AI +
Sbjct: 268 ILDGYGSKLMVGRFPIAIIDIQIDPYLADVNVHPTKQEVRISKEKELMQLISLAIAESLR 327
Query: 353 KKIAHDSFDVDMLEDA-ELPLESSRFQSHQSSTHLHSSPLKNLA----KQRDHMFHKEC 406
K+ D++ DA E +SS + +H++ S PLK K ++ F KE
Sbjct: 328 KQ--------DLIPDALENLAKSSTYHNHKAEQ--TSLPLKQSTIYYDKDKNDFFLKEA 376
>gi|449964620|ref|ZP_21811408.1| DNA mismatch repair protein [Streptococcus mutans 15VF2]
gi|449172344|gb|EMB74974.1| DNA mismatch repair protein [Streptococcus mutans 15VF2]
Length = 651
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|450040379|ref|ZP_21836772.1| DNA mismatch repair protein [Streptococcus mutans T4]
gi|449199020|gb|EMC00105.1| DNA mismatch repair protein [Streptococcus mutans T4]
Length = 651
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|334340544|ref|YP_004545524.1| DNA mismatch repair protein MutL [Desulfotomaculum ruminis DSM
2154]
gi|334091898|gb|AEG60238.1| DNA mismatch repair protein MutL [Desulfotomaculum ruminis DSM
2154]
Length = 637
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 144/271 (53%), Gaps = 16/271 (5%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L EA N + +G V+ V +ELV NS+DAGA+++ V + G+ +KV+
Sbjct: 1 MSKIQVLDEATANQIAAGEVVERPVSVAKELVENSLDAGASRITVELIQGGLSG--IKVI 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+GSG+S + L +RH ATSK+ D+ T I T GFRGEAL SI+ V+ + ++T+
Sbjct: 59 DNGSGMSPEDAKLCFQRH-ATSKIKTAGDL---TRILTLGFRGEALPSIASVAKVALVTR 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G M+G + L + VGTT+ ++LFYN P RRK+++ SP +
Sbjct: 115 TRDDLAGTEVRMEGGQL--LSVSPAGCPVGTTIDVQELFYNTPARRKHLK-SPNAEAGQI 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELL-CTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
++AL P V +++ S ++ C+ + S S FG ++ + E+N
Sbjct: 172 SDLFAKLALARPDVR---MELRSNGRVIFCSPGNGSLRDAAASVFGPDNVRSMIEMNHQG 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYV 267
L I G+IS P + + + +Q YIN RY+
Sbjct: 229 RLLTIRGFISKPVLTRASRQYQNFYINQRYI 259
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 29/203 (14%)
Query: 1172 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1231
QV ++ G+L +IDQHAA ER+ E+ + ++ G + E V +I Y
Sbjct: 456 QVFPTYVLAQGEGSLYIIDQHAAHERVFYEKYKEQLTRGVQSQMLL-----EPVPLDIPY 510
Query: 1232 QLLQNFAEQI---KDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDV 1288
LQ + D G++ F + LL+ VP G V
Sbjct: 511 HHLQRLIANVVALSDMGFVVE-------HFGGDTFLLR---------GVPP--GTTEKPV 552
Query: 1289 DL-LEFLQQLADTDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1346
+L ++ L +L D+ ++ R+ + ACR A+ G L E ++E L +
Sbjct: 553 ELFMDLLDRLQDSPAEQLDNSLMIDRLAAAMACRDAVKAGTRLGHKEIQSLLEGLSRCHS 612
Query: 1347 CFQCAHGRPTTVPLVNLEALHKQ 1369
+ C HGRPT + + E L+K+
Sbjct: 613 PYTCPHGRPTLIQITQ-EELNKR 634
>gi|450051788|ref|ZP_21841025.1| DNA mismatch repair protein [Streptococcus mutans NFSM1]
gi|449201602|gb|EMC02592.1| DNA mismatch repair protein [Streptococcus mutans NFSM1]
Length = 651
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|450120896|ref|ZP_21865983.1| DNA mismatch repair protein [Streptococcus mutans ST6]
gi|449229790|gb|EMC29085.1| DNA mismatch repair protein [Streptococcus mutans ST6]
Length = 651
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVVNRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|312130605|ref|YP_003997945.1| DNA mismatch repair protein mutl [Leadbetterella byssophila DSM
17132]
gi|311907151|gb|ADQ17592.1| DNA mismatch repair protein MutL [Leadbetterella byssophila DSM
17132]
Length = 602
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 173/356 (48%), Gaps = 38/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
M I L +A+ N + +G V+ VV+EL+ NS+DAGA + + V ++V+DD
Sbjct: 1 MDKIKLLSDAIANQIAAGEVVQRPASVVKELLENSIDAGALNLKLIVKESGKTLIQVIDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSG+S + ERHA TSK+ D+ I T GFRGEALASI+ V+ +E+ T+
Sbjct: 61 GSGMSPTDARMSFERHA-TSKIKESIDL---FNIRTMGFRGEALASIAAVAQVEMKTRRE 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G ++GS+ + K GT++ ++LF+N P RRK+++S+P ++ H +++
Sbjct: 117 EDEVGTLIRIEGSEVVEQDFIQAAK--GTSIAVKNLFFNVPARRKFLKSNPVEMKHIIEE 174
Query: 180 CVLRIALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEV---NA 234
R+AL HP VSF D+E + S AL D S+ D++
Sbjct: 175 F-QRVALAHPDVSFILYHNDIEVMNLPAARLSKRITDAL--------DKSYRDQLAKCEI 225
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
++I+GY+ P + K QY ++N R++ +H + + +F+ + +
Sbjct: 226 ETDVVKITGYVGKPQSAKKTKGDQYFFVNKRFIKSNYLH---HAVVNAFESAIPEGTH-- 280
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
P Y L L D+ P KT + F + + + A + A++ +
Sbjct: 281 ------------PFYTLFLEIHPENIDINIHPTKTEIKFDNEQLIYAVLRSAVKQS 324
>gi|365961481|ref|YP_004943048.1| DNA mismatch repair protein MutL [Flavobacterium columnare ATCC
49512]
gi|365738162|gb|AEW87255.1| DNA mismatch repair protein MutL [Flavobacterium columnare ATCC
49512]
Length = 625
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 165/346 (47%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+ELV N++DAG+T + + ++V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELVENAIDAGSTDIKLICKDAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ D+ D + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSVTDARLCFERHA-TSKIRKAEDLFD---LHTKGFRGEALASIAAIAHVELKTKQDQEE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G +++GSK ++ + GT+ ++LF+N P RR +++S ++ H +
Sbjct: 121 LGTHLIIEGSK--FVSQEPSVLPKGTSFAIKNLFFNIPARRNFLKSDTVELRHIIDDF-Q 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL H + F F SE + S+ +++ F + L V + + +
Sbjct: 178 RVALAHENIHFTFYHNGSE---VFNLPQSNLRQRIVNIFAGKTNEKLVPVTEDTEIVRLK 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+I P + + Q+ ++N R++ G +H + A G LK
Sbjct: 235 GFIGKPEFAKKNRGEQFFFVNDRFIKSGYLHHAI------------MAAYEGLLKEGMQ- 281
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P+Y L L P D+ P KT + F D + + A I A++
Sbjct: 282 ----PSYFLYLDVPPHTIDINIHPTKTEIKFDDEQALYAIIRSAVK 323
>gi|347539107|ref|YP_004846532.1| DNA mismatch repair protein MutL [Pseudogulbenkiania sp. NH8B]
gi|345642285|dbj|BAK76118.1| DNA mismatch repair protein MutL [Pseudogulbenkiania sp. NH8B]
Length = 629
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 166/344 (48%), Gaps = 28/344 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ LP+ + N + +G V+ ++E++ NS+DAGA ++ V + ++V D+
Sbjct: 1 MKRIHALPDHLVNQIAAGEVVERPASALKEMLENSLDAGADRITVDLAQGGIKLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI D L L +RHA TSK+ LAD++ + T GFRGE LASI+ VS L +I++ H
Sbjct: 61 GSGIVPDDLPLALDRHA-TSKIASLADLES---VATLGFRGEGLASIASVSRLTLISRPH 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ + +++ L+ ++ GT+V DL++N P RRK+++ + H
Sbjct: 117 DEAHAH-QIIAIDGALH-PVEPAAHAPGTSVEVVDLYFNTPARRKFLKGENTEYAHCA-A 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
RIAL HP+V F L S + + L+ +E L+ N G L
Sbjct: 174 TFERIALAHPQVEFLLRHNGKAVWRLPAQSLAERVGALLGKDFVEAALPLE---TNAGGL 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+++G+++SP S + + QY Y+N R+V L +A L
Sbjct: 231 QLAGFVASPTYSKASRDAQYFYVNGRFVRDKTAQHALR------------QAYRDVLHHD 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 343
R PAY L L + D+ P K V F++ + + F+
Sbjct: 279 RH-----PAYALFLTIDPAGVDVNVHPTKIEVRFRESQAIHQFL 317
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 25/175 (14%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L V+D HAA ERI E L++ + E S+ Q L+LP +FA D
Sbjct: 459 LIVVDMHAAHERIVYERLKNAL---EADSIPM----QPLLLP-------VSFA---ADRM 501
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQ-LADTDGSS 1304
+H G + L T I + VP V L D + +E + L D
Sbjct: 502 EAATVHEHGEEMKRLGVELAPLSPTQIAVRGVP----VWLKDGNPVELARAVLKDVREFG 557
Query: 1305 TTPPSVLR---VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
T R +L + AC GA+ L +E ++ +++ T QC HGRPT
Sbjct: 558 LTRVLTERRNELLATMACHGAVRANRQLTLAEMNALLRDMEATERSGQCNHGRPT 612
>gi|90414477|ref|ZP_01222453.1| DNA mismatch repair protein [Photobacterium profundum 3TCK]
gi|90324482|gb|EAS41041.1| DNA mismatch repair protein [Photobacterium profundum 3TCK]
Length = 717
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 171/350 (48%), Gaps = 27/350 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDKGGSRTIRIRDNGKG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I++D L L RHA TSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IAKDELGLALSRHA-TSKISSL---DDLEAIVSLGFRGEALASISSVSRLTLTSRTATQE 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+ +G + + + + +GTT+ DLF+N P RRK++++ + H + + +
Sbjct: 119 EAWSAYAEG-RDMDVQLKPAAHPIGTTIEVLDLFFNTPARRKFLRTEKTEFNH-IDELLK 176
Query: 183 RIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
RIAL VS + ++ + + + L+S+ G V G L++
Sbjct: 177 RIALSRFDVSITLRHNGKTIRQYRASQTQIQKERRLVSACGQSFLQHALAVELEHGDLKL 236
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
SG+I +P S S QY Y+N R + KL+NH +++AN
Sbjct: 237 SGWICTPQGSRSQNDVQYCYVNGRMMKD----KLINHA-----IRQAYEANLA------- 280
Query: 302 KSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
S AY+L + PH + D+ P K V F V FI + I+SA
Sbjct: 281 -SDQYSAYVLFIEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQGIQSA 328
>gi|308806882|ref|XP_003080752.1| suppressor of forked protein family protein / SUF family protein
(ISS) [Ostreococcus tauri]
gi|116059213|emb|CAL54920.1| suppressor of forked protein family protein / SUF family protein
(ISS) [Ostreococcus tauri]
Length = 1661
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 111/216 (51%), Gaps = 22/216 (10%)
Query: 1156 PDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVL------- 1208
P ++ ++ LE A+V+ QV KKFI + DQHA DERI LEEL +L
Sbjct: 438 PATLERAALEKARVIDQVGKKFIISTVDDCIVAFDQHACDERIGLEELWATILNPNKHVP 497
Query: 1209 SGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQ 1268
+ E KS A + + L+N A ++ WGW G+ +Q
Sbjct: 498 TQETKSPALWATPMSVN----EFDALENNAHNVRRWGWDWKTDDGGN----------GKQ 543
Query: 1269 ITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVL-RVLNSKACRGAIMFGD 1327
T+I L VP I G L L ++L +L T SST P L R+L SKACRGAIMFGD
Sbjct: 544 ETMIYLTRVPTIRGTTLGGDALRQYLYELTSTSSSSTHAPRPLHRLLASKACRGAIMFGD 603
Query: 1328 SLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1363
+L P EC I++ L+ T + F CAHGRPT PL +
Sbjct: 604 TLNPHECECIIKALRLTQMPFACAHGRPTCAPLARI 639
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 145/347 (41%), Gaps = 41/347 (11%)
Query: 17 SGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKV-VDDGSGISRDG----LVLL 71
+G L ++V V N++DA A + V VGV + + DDG G++R+ +
Sbjct: 10 TGDASTRLIQIVARAVKNALDARARTISVEVGVRDVITMLCADDGEGMTRESARELVWAF 69
Query: 72 GERHAATSKLGHLADMDDATGIGTFGFRGEALASI-SDVSLLEIITKAHGR--PNGYRKV 128
GE + A A+ RG AL++I + +EI T+A+ R
Sbjct: 70 GEPNGAARGATRQANRR----------RGRALSTIVAQCERVEIATRANNECETTTIRAT 119
Query: 129 -MKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK--VLHSVKKCVLRIA 185
G +C D++ TTV +F + + +K + +K V
Sbjct: 120 RAAGVECGSGAFDEK---WSTTVKCVGVFAANSIAAARTREDVRKGALERELKSIVFHAC 176
Query: 186 LVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN--ANDGALEISG 243
L+ P++S I M + S L L ++G E +L V+ + D + G
Sbjct: 177 LLRPELSMNVI-MNGRAVERVSGDRESVLDGLRRAYGDEVVGWLRMVDYESEDAKWRVRG 235
Query: 244 YISSPYDSISVKAFQYVYINSRYVCK--GPIHKLLNHLAASFDCSDSWKANNGFL-KGKR 300
Y++ + Q VY+N ++ +H+ + + A + FL G R
Sbjct: 236 YVTPADRRLGSSDMQLVYVNGDHIIGKVDALHREMIRIEA-----------DAFLGDGAR 284
Query: 301 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
+ + P +L+ + CP Y++T+DP +T + F DW+ + + + +AI
Sbjct: 285 NAGKGYPGFLIAIDCPDDSYEVTYDPSRTLIEFDDWDTMFSHLRQAI 331
>gi|417753307|ref|ZP_12401438.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|333770358|gb|EGL47397.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 673
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 192/417 (46%), Gaps = 50/417 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA +++V + + +++ D+
Sbjct: 14 MTKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQVTIDIEESGLKKIQITDN 73
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + L L RHA TSK+ +D+ I T GFRGEAL S++ +S + I T
Sbjct: 74 GEGMSPEDLPLSLRRHA-TSKIKSQSDL---FRIRTLGFRGEALPSVASISKITIKTATK 129
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G V G + L ++ VGT + +LFYN P R KYM+S ++ H V
Sbjct: 130 EDNHGSLLVAIGGEIETL--EETSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIV-D 186
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
V R++L HP+VSF I S+ L S + L I+ +G+ + ++ D
Sbjct: 187 VVNRLSLAHPEVSFILI---SDGRQLTQTSGTGDLRQAIAGIYGLNTAKKMIAISNADLD 243
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
E+SGY+S P + + + + + IN RY+ ++ N L G
Sbjct: 244 FEVSGYVSLPELTRANRNYMTILINGRYI-------------------KNFLLNRAILDG 284
Query: 299 KRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
SK P +++++ L D+ P K V ++A I AI + ++
Sbjct: 285 YGSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKERELMALISTAISESLKEQ-- 342
Query: 357 HDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLKNLA----KQRDHMFHKECE 407
D++ DA L S+R S T L PL++ QR+ F KE +
Sbjct: 343 ------DLIPDALENLAKSSTRHFSKPEQTQL---PLQSKGLYYDPQRNDFFVKESD 390
>gi|238795251|ref|ZP_04638834.1| DNA mismatch repair protein mutL [Yersinia intermedia ATCC 29909]
gi|238725419|gb|EEQ16990.1| DNA mismatch repair protein mutL [Yersinia intermedia ATCC 29909]
Length = 638
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 188/381 (49%), Gaps = 37/381 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I+ LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ L L RH ATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKEDLSLALARH-ATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQN 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIAL V+ I++ +L+ S L S G ++ G
Sbjct: 177 RIALARFDVA---INLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P S ++ QY Y+N+R + +L+NH +A LK
Sbjct: 234 LTIRGWVADPAASRTLSEMQYCYVNNRMMRD----RLINHAIR--------QAYQDLLKD 281
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 282 DQQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQAAS 334
Query: 358 DSFDVDMLEDAELPLESSRFQ 378
+++ ED E +E+ R+Q
Sbjct: 335 PVLNIN--EDGE-EIEAPRWQ 352
>gi|450110640|ref|ZP_21862214.1| DNA mismatch repair protein [Streptococcus mutans SM6]
gi|449224640|gb|EMC24266.1| DNA mismatch repair protein [Streptococcus mutans SM6]
Length = 651
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I + EL T L +GI + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLI--KDGRELTKTAGKGDLHQALAGIYGITTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|449981701|ref|ZP_21817906.1| DNA mismatch repair protein [Streptococcus mutans 5SM3]
gi|449175597|gb|EMB78003.1| DNA mismatch repair protein [Streptococcus mutans 5SM3]
Length = 651
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|449969187|ref|ZP_21813062.1| DNA mismatch repair protein [Streptococcus mutans 2VS1]
gi|450030661|ref|ZP_21833352.1| DNA mismatch repair protein [Streptococcus mutans G123]
gi|450058932|ref|ZP_21843295.1| DNA mismatch repair protein [Streptococcus mutans NLML4]
gi|450164010|ref|ZP_21881081.1| DNA mismatch repair protein [Streptococcus mutans B]
gi|449174307|gb|EMB76801.1| DNA mismatch repair protein [Streptococcus mutans 2VS1]
gi|449192613|gb|EMB94028.1| DNA mismatch repair protein [Streptococcus mutans G123]
gi|449203587|gb|EMC04444.1| DNA mismatch repair protein [Streptococcus mutans NLML4]
gi|449242467|gb|EMC41053.1| DNA mismatch repair protein [Streptococcus mutans B]
Length = 651
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 164/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R +L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRFSLAHPEIAFTLIN--DSRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|449911079|ref|ZP_21794998.1| DNA mismatch repair protein [Streptococcus mutans OMZ175]
gi|450132411|ref|ZP_21870041.1| DNA mismatch repair protein [Streptococcus mutans NLML8]
gi|449153188|gb|EMB56876.1| DNA mismatch repair protein [Streptococcus mutans NLML8]
gi|449258710|gb|EMC56274.1| DNA mismatch repair protein [Streptococcus mutans OMZ175]
Length = 651
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V+D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RH ATSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRH-ATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIYGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|450064168|ref|ZP_21845289.1| DNA mismatch repair protein [Streptococcus mutans NLML5]
gi|450127818|ref|ZP_21868763.1| DNA mismatch repair protein [Streptococcus mutans U2A]
gi|449203953|gb|EMC04784.1| DNA mismatch repair protein [Streptococcus mutans NLML5]
gi|449230233|gb|EMC29500.1| DNA mismatch repair protein [Streptococcus mutans U2A]
Length = 651
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V+D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RH ATSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRH-ATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIYGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|325955049|ref|YP_004238709.1| DNA mismatch repair protein mutL [Weeksella virosa DSM 16922]
gi|323437667|gb|ADX68131.1| DNA mismatch repair protein mutL [Weeksella virosa DSM 16922]
Length = 593
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 179/367 (48%), Gaps = 33/367 (8%)
Query: 1 MG-TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVD 58
MG I LP+ V N + +G V+ + VV+EL+ N+VDAGA+++ V + ++++D
Sbjct: 1 MGDIIQLLPDHVANQIAAGEVVQRPSSVVKELMENAVDAGASEIKVLIKDAGRSLIQIID 60
Query: 59 DGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 118
DG G+S + + ERH ATSK + +D I T GFRGEALASI+ V+ +E TK
Sbjct: 61 DGKGMSMTDVRMAFERH-ATSK---IRTTEDIFHITTKGFRGEALASIAAVAQVEAKTKL 116
Query: 119 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 178
G V++G + GT+V ++LFYN P RR +++S+ + H ++
Sbjct: 117 TDETLGSLLVIEGGDVRVQ--EPVVTPSGTSVSVKNLFYNVPARRNFLKSNQVEFRH-IQ 173
Query: 179 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 238
RIAL H +SF+ I S+ + + + ++ FG + + L E+
Sbjct: 174 DEFQRIALAHEGISFQLIHNNSD---VYYLKAGNLKQRIVQIFGKKIETQLLEILEETEI 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA--NNGFL 296
+ I GY+ P + + Q+ ++N+R++ +HK + +D+++ NG+
Sbjct: 231 VNIKGYVGKPDSAKKSRGEQFFFVNNRFIKNAYLHKAI---------TDAFEGLLPNGY- 280
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
P+Y L L S D+ P KT + F++ + + AI+ + +
Sbjct: 281 ---------TPSYFLYLELDPSKIDINIHPTKTEIKFEEDTKIFQLLRSAIKHSLGQFNV 331
Query: 357 HDSFDVD 363
S D D
Sbjct: 332 VPSLDFD 338
>gi|197301743|ref|ZP_03166813.1| hypothetical protein RUMLAC_00469 [Ruminococcus lactaris ATCC
29176]
gi|197299183|gb|EDY33713.1| DNA mismatch repair domain protein [Ruminococcus lactaris ATCC
29176]
Length = 713
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 183/377 (48%), Gaps = 45/377 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I+ L + + + +G V+ +V+ELV N++DAG+T V V + G+ ++++
Sbjct: 1 MPHIHVLDQITIDKIAAGEVIERPASIVKELVENAIDAGSTSVTVEIKDGGIS--FIRIR 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI ++ + RH+ TSK+ ++D + I + GFRGEAL+SI+ V+ E+ITK
Sbjct: 59 DNGCGIPKEEVKSAFLRHS-TSKI---ETVEDLSHIASLGFRGEALSSIAAVTRTEVITK 114
Query: 118 AHGRPNGYRKVMKGSKCLYL---GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G + V++G K + L G D GTT + LFYN P RRK++++ +
Sbjct: 115 TKDSDLGTKYVIEGGKEVSLEETGAPD-----GTTFLVHQLFYNVPARRKFLKTPMTEAG 169
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
H V+ ++ +AL HP+V+ +F++ + E L T + ++ +G + + L E++
Sbjct: 170 H-VQDLLMHLALSHPEVALQFLN--NGQEKLRTSGNGKLKDVIYQIYGRDVAANLIELDY 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
G L I+G++ P + + F+ ++N RYV G I K L F +
Sbjct: 227 EKGGLRITGFLGKPVITRGNRNFENFFVNGRYVKSGMISKALEDAYRDFVMQHKF----- 281
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
P +L+ D+ P K + F+ + V + A+ ++
Sbjct: 282 ------------PFAVLHFHLNGEEVDINVHPTKMELRFQKQQEVYGTVFEAVHRTLLEP 329
Query: 355 IAHDSFDVDMLEDAELP 371
++++ AE+P
Sbjct: 330 --------ELIQRAEVP 338
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 37/231 (16%)
Query: 1152 EFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGE 1211
+ F + + + + K++ QV + V L +IDQHAA ER+ L + L G
Sbjct: 509 DLFEENFLKREVRAEYKLIGQVFDTYWLVEFQDKLYIIDQHAAHERV----LYERTLQG- 563
Query: 1212 GKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV 1271
+ F Q I ++ Q ++ N+NL+ R
Sbjct: 564 --------------------MKTREFTSQYLSPPIILSLSMQEAQLLNENLDRFTRIGFE 603
Query: 1272 I--------TLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGA 1322
I + AVP +F + ++ L+E L LAD + TP + + S +C+ A
Sbjct: 604 IEPFGGEEYAVRAVPDNLFSIAKKEL-LMEMLDDLADGLSTGMTPELIDEKVASMSCKAA 662
Query: 1323 IMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV--NLEALHKQIA 1371
+ + L E ++ EL + C HGRPT + + +LE K+I
Sbjct: 663 VKGNNRLSAQEVDELIAELLTLDNPYHCPHGRPTIIAMTKHDLEKKFKRIV 713
>gi|449936541|ref|ZP_21804029.1| DNA mismatch repair protein [Streptococcus mutans 2ST1]
gi|450153981|ref|ZP_21877479.1| DNA mismatch repair protein [Streptococcus mutans 21]
gi|449165511|gb|EMB68515.1| DNA mismatch repair protein [Streptococcus mutans 2ST1]
gi|449238252|gb|EMC37026.1| DNA mismatch repair protein [Streptococcus mutans 21]
Length = 651
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 164/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQTDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|206577274|ref|YP_002240875.1| DNA mismatch repair protein [Klebsiella pneumoniae 342]
gi|290512270|ref|ZP_06551637.1| DNA mismatch repair protein mutL [Klebsiella sp. 1_1_55]
gi|238058935|sp|B5Y334.1|MUTL_KLEP3 RecName: Full=DNA mismatch repair protein MutL
gi|206566332|gb|ACI08108.1| DNA mismatch repair protein MutL [Klebsiella pneumoniae 342]
gi|289775265|gb|EFD83266.1| DNA mismatch repair protein mutL [Klebsiella sp. 1_1_55]
Length = 619
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 174/369 (47%), Gaps = 54/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ K I D + E L C + A L + IE
Sbjct: 177 RIALARFDVTINLNHNGKVIRQYRAVAQDGQRERRLGTICGA----AFLEHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLRGWVADPLHTTPALAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKI 355
+ S +++
Sbjct: 326 VLSVLQQQL 334
>gi|320155085|ref|YP_004187464.1| DNA mismatch repair protein MutL [Vibrio vulnificus MO6-24/O]
gi|319930397|gb|ADV85261.1| DNA mismatch repair protein MutL [Vibrio vulnificus MO6-24/O]
Length = 664
Score = 127 bits (318), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 173/365 (47%), Gaps = 55/365 (15%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ VV+ELV NS+D+GATK+ + + +++ D+GS
Sbjct: 2 TIRILPARLANQIAAGEVVERPASVVKELVENSLDSGATKIDIDIEKGGAKLIRIRDNGS 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GI +D L L RH ATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 62 GIVKDELGLALSRH-ATSKIHTL---DDLEAIMSLGFRGEALASISSVSRLTLTSRPATQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
+ +G + + + + +GTTV DLF+N P RRK++++ + H + + +
Sbjct: 118 EQAWSAYTEG-RDMQVKLQPTAHPIGTTVEVVDLFFNTPARRKFLRTEKTEFAH-IDELL 175
Query: 182 LRIALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFS 227
RIAL VS K I D+++E L C + +L
Sbjct: 176 KRIALSRFDVSITLRHNGKVIRQYRAAHNDLQAEKRLATVCGQAFVRCML---------- 225
Query: 228 FLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCS 286
++ L++ G+I++P + QY Y+N R + KL+NH + S++ S
Sbjct: 226 ---KIELEHQGLKLHGWITTPEGARQQSDLQYCYVNGRMMRD----KLINHAIRQSYETS 278
Query: 287 DSWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIER 345
K + AY+L + PH + D+ P K V F V FI +
Sbjct: 279 --------------LKPEQFAAYVLFIELDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQ 323
Query: 346 AIRSA 350
A+ SA
Sbjct: 324 ALASA 328
>gi|450092545|ref|ZP_21856050.1| DNA mismatch repair protein [Streptococcus mutans W6]
gi|450149197|ref|ZP_21876035.1| DNA mismatch repair protein [Streptococcus mutans 14D]
gi|449218098|gb|EMC18120.1| DNA mismatch repair protein [Streptococcus mutans W6]
gi|449234920|gb|EMC33906.1| DNA mismatch repair protein [Streptococcus mutans 14D]
Length = 651
Score = 127 bits (318), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 164/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R +L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRFSLAHPEIAFTLIN--DSRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|449904936|ref|ZP_21792936.1| DNA mismatch repair protein [Streptococcus mutans M230]
gi|450010875|ref|ZP_21828837.1| DNA mismatch repair protein [Streptococcus mutans A19]
gi|450023560|ref|ZP_21830675.1| DNA mismatch repair protein [Streptococcus mutans U138]
gi|450116658|ref|ZP_21864598.1| DNA mismatch repair protein [Streptococcus mutans ST1]
gi|449189862|gb|EMB91482.1| DNA mismatch repair protein [Streptococcus mutans A19]
gi|449193167|gb|EMB94558.1| DNA mismatch repair protein [Streptococcus mutans U138]
gi|449226762|gb|EMC26253.1| DNA mismatch repair protein [Streptococcus mutans ST1]
gi|449258775|gb|EMC56335.1| DNA mismatch repair protein [Streptococcus mutans M230]
Length = 651
Score = 127 bits (318), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLHQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|54310432|ref|YP_131452.1| DNA mismatch repair protein [Photobacterium profundum SS9]
gi|46914873|emb|CAG21650.1| putative DNA mismatch repair protein MutL [Photobacterium profundum
SS9]
Length = 717
Score = 127 bits (318), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 172/358 (48%), Gaps = 27/358 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGSRTIRIRDNGKG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I++D L L RHA TSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IAKDELGLALSRHA-TSKISSL---DDLEAIVSLGFRGEALASISSVSRLTLTSRTATQE 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+ +G + + + + +GTT+ DLF+N P RRK++++ + H + + +
Sbjct: 119 EAWSAYAEG-RDMDVQLKPAAHPIGTTIEVLDLFFNTPARRKFLRTEKTEFNH-IDELLK 176
Query: 183 RIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
RIAL VS + ++ + + + L+S+ G V G L +
Sbjct: 177 RIALSRFDVSITLRHNGKTIRQYRASQTQIQKERRLVSACGQSFLQHALAVELEHGDLNL 236
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
SG+I +P S S QY Y+N R + KL+NH +++AN
Sbjct: 237 SGWICTPQGSRSQNDVQYCYVNGRMMKD----KLINHA-----IRQAYEANLA------- 280
Query: 302 KSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 358
S AY+L + PH + D+ P K V F V FI + I+SA + D
Sbjct: 281 -SDQYSAYVLFIEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQGIQSALQQGAMDD 336
>gi|422700397|ref|ZP_16758244.1| DNA mismatch repair protein [Enterococcus faecalis TX1342]
gi|315171155|gb|EFU15172.1| DNA mismatch repair protein [Enterococcus faecalis TX1342]
Length = 710
Score = 127 bits (318), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 169/354 (47%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++ IE+AI+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMTLIEQAIQ 323
>gi|449932947|ref|ZP_21803052.1| DNA mismatch repair protein [Streptococcus mutans 3SN1]
gi|449160794|gb|EMB64035.1| DNA mismatch repair protein [Streptococcus mutans 3SN1]
Length = 651
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|440289406|ref|YP_007342171.1| DNA mismatch repair protein MutL [Enterobacteriaceae bacterium
strain FGI 57]
gi|440048928|gb|AGB79986.1| DNA mismatch repair protein MutL [Enterobacteriaceae bacterium
strain FGI 57]
Length = 616
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 183/380 (48%), Gaps = 33/380 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS V+ L + ++ +P
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQP 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VGTT+ DLFYN P RRK+M++ K + + + +
Sbjct: 119 EAWQAYAEG-RDQDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GAL 239
RIAL V+ + +P + + I +FL+ A + G L
Sbjct: 177 RIALARFDVAITLNHNGKMIRQYRAVTQGAPRERRLGA--ICGTAFLEHALAIEWQHGDL 234
Query: 240 EISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ G+++ P + + ++ QY Y+N R + +L+NH A C D A+
Sbjct: 235 TLHGWVADPNHTTPALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGADQQ---- 285
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI-A 356
PA++L L PH + D+ P K V F V FI + + S +++ A
Sbjct: 286 --------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLEA 336
Query: 357 HDSFDVDMLEDAELPLESSR 376
+ D D E A P+ +R
Sbjct: 337 PLARDEDDDELAPRPIAENR 356
>gi|386317937|ref|YP_006014101.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|323128224|gb|ADX25521.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 660
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 192/417 (46%), Gaps = 50/417 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA +++V + + +++ D+
Sbjct: 1 MTKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQVTIDIEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + L L RHA TSK+ +D+ I T GFRGEAL S++ +S + I T
Sbjct: 61 GEGMSPEDLPLSLRRHA-TSKIKSQSDL---FRIRTLGFRGEALPSVASISKITIKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G V G + L ++ VGT + +LFYN P R KYM+S ++ H V
Sbjct: 117 EDNHGSLLVAIGGEIETL--EETSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
V R++L HP+VSF I S+ L S + L I+ +G+ + ++ D
Sbjct: 174 VVNRLSLAHPEVSFILI---SDGRQLTQTSGTGDLRQAIAGIYGLNTAKKMIAISNADLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
E+SGY+S P + + + + + IN RY+ ++ N L G
Sbjct: 231 FEVSGYVSLPELTRANRNYMTILINGRYI-------------------KNFLLNRAILDG 271
Query: 299 KRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
SK P +++++ L D+ P K V ++A I AI + ++
Sbjct: 272 YGSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKERELMALISTAISESLKEQ-- 329
Query: 357 HDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLKNLA----KQRDHMFHKECE 407
D++ DA L S+R S T L PL++ QR+ F KE +
Sbjct: 330 ------DLIPDALENLAKSSTRHFSKPEQTQL---PLQSKGLYYDPQRNDFFVKESD 377
>gi|163756800|ref|ZP_02163909.1| DNA mismatch repair protein [Kordia algicida OT-1]
gi|161323189|gb|EDP94529.1| DNA mismatch repair protein [Kordia algicida OT-1]
Length = 620
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 169/346 (48%), Gaps = 28/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DA AT++ + V + V+D+G G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPASVVKELLENAIDAKATEIKLIVKEAGKTLIHVIDNGFG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERHA TSK+ D+ + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSETDARLSFERHA-TSKIQAAEDL---FNLNTKGFRGEALASIAAIAHVELQTKKEADE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G R ++GSK + + GT++ ++LFYN P RR +++S ++ H + +
Sbjct: 121 LGTRIKIEGSKLITQEVI--TTPTGTSIAVKNLFYNIPARRNFLKSDAVELRHIIDEF-Q 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP + F +E L S+ +++ G + L + + ++IS
Sbjct: 178 RVALAHPDIGFVLYHNGNE---LFNLPKSNYRQRIVNILGGKTNEKLVPIQEDTDIVKIS 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + + Q+ ++N+R++ +H +N A+F+ G LK K
Sbjct: 235 GFVGKPEFAKKSRNEQFFFVNNRFIKSPYLHHAIN---AAFE---------GLLKEKMQ- 281
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
P+Y + L D+ P KT + F D + A + ++
Sbjct: 282 ----PSYFIYLEVHPETIDINIHPTKTEIKFDDEHSLYAMLRATVK 323
>gi|239826704|ref|YP_002949328.1| DNA mismatch repair protein [Geobacillus sp. WCH70]
gi|259509936|sp|C5D9H6.1|MUTL_GEOSW RecName: Full=DNA mismatch repair protein MutL
gi|239806997|gb|ACS24062.1| DNA mismatch repair protein MutL [Geobacillus sp. WCH70]
Length = 619
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 166/355 (46%), Gaps = 28/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I +L + + N + +G V+ VV+ELV N+VDA +T + + + ++V+D+
Sbjct: 1 MGKIRKLDDQLSNKIAAGEVVERPASVVKELVENAVDANSTIIEIELEEAGLTKIRVIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+ D ++ ERH ATSK + D D I T GFRGEAL SI+ VS +E+ T
Sbjct: 61 GDGMEEDDCLVAFERH-ATSK---IKDEHDLFRIRTLGFRGEALPSIASVSEVEMKTSTG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P G + V+KG K + RK GT + +LF+N P R KYM++ ++ H V
Sbjct: 117 DGP-GTKVVLKGGKLVVHERTTSRK--GTDITVSNLFFNTPARLKYMKTIHTELGH-VTD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+A+ HP +SF+ +LL T + +L + +G++ + + A
Sbjct: 173 VVNRLAMAHPDISFRL--RHHGKQLLYTSGNGDVRHVLAAIYGMDVAKKMIPIQAESLDF 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
+ GYIS P + + + + +N RYV P+ K + + L
Sbjct: 231 TVQGYISLPEVTRASRNYISTIVNGRYVRNIPLAKAIE------------AGYHTLLPIG 278
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
R P L++ L D+ P K V F + + +AIR A +
Sbjct: 279 R-----YPIVFLSIAMDPILVDVNVHPAKLEVRFSKEAELNELVTQAIRQALQAR 328
>gi|81427977|ref|YP_394976.1| DNA mismatch repair protein [Lactobacillus sakei subsp. sakei 23K]
gi|78609618|emb|CAI54664.1| DNA mismatch repair protein MutL [Lactobacillus sakei subsp. sakei
23K]
Length = 653
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 175/356 (49%), Gaps = 42/356 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L E + N + +G V+ VV+ELV N++DA +T+V + V ++V+D+
Sbjct: 2 MGKIHELSEILSNQIAAGEVIERPASVVKELVENAIDANSTQVDIVVEQAGLQMIQVIDN 61
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + + + +RH ATSK +A D I + GFRGEALASI+ VS L I T A
Sbjct: 62 GDGIEPEDVPVAFKRH-ATSK---IATRQDLFKIQSLGFRGEALASIASVSDLTIET-AT 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKD----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 175
G KG G+ +E+K GT + RDLF+N P R KY+++ + L
Sbjct: 117 ADSLGTFAHFKG------GLLEEQKTNPIRPGTAITVRDLFFNTPARLKYVKTFQTE-LA 169
Query: 176 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 234
++ V R+A+ HP+++F + ++ LL + ++ L I+ +G+ L V+A
Sbjct: 170 NIVDIVNRLAMSHPQIAFT---LTNDGHLLLKTAGNNDLKQTIAGIYGVTMAKKLLAVSA 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
+D +++GY+S P + + + + + IN R++ +++ N
Sbjct: 227 SDLDFKLTGYVSLPELTRATRNYLSILINGRFI-------------------KNYQLNKA 267
Query: 295 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
+KG SK P +L + L D+ P K V ++ IE AI+
Sbjct: 268 IIKGYGSKLMVGRYPIAVLAIEMDPLLIDVNVHPTKQEVRLSKETALMTLIEGAIK 323
>gi|423315754|ref|ZP_17293659.1| DNA mismatch repair protein MutL [Bergeyella zoohelcum ATCC 43767]
gi|405585470|gb|EKB59294.1| DNA mismatch repair protein MutL [Bergeyella zoohelcum ATCC 43767]
Length = 593
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 182/376 (48%), Gaps = 31/376 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ +V+EL+ N++DAGATKV + V V+VVD+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASIVKELMENAIDAGATKVELIVREAGRNLVQVVDNGIG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERH ATSK + +D I + GFRGEALASI+ VS +E+ TK
Sbjct: 65 MSETDARMAFERH-ATSK---IRTTEDIFKIMSKGFRGEALASIAAVSQVELKTKKQDAD 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++G + + + GT++ ++LFYN P RRK+++++ + H + +
Sbjct: 121 IGTNIYIEGGMLQFQ--EPIQTTTGTSIAVKNLFYNVPARRKFLKNNNVEFRHILDEFQ- 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL H ++ F D+ D + S L ++ FG + L + + G +++
Sbjct: 178 RVALAHEQIEF---DLFHNDAPIFRLRKGSSLQRIVDIFGRKLQPLLIPLKEDLGWIKLQ 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G+++ P + + Q+ ++N R+ ++K + +A G L
Sbjct: 235 GFVAKPEGAKKTRGEQFFFVNGRFFKSPYLNKAVQ------------EAFEGLL-----M 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-RSAWMKKIAHDSFD 361
P++ L L D+ P KT + F+D + A I I RS + IA S D
Sbjct: 278 PGYTPSFFLFLETEPEKIDVNVHPQKTEIKFEDEHLIFALIRSTIKRSLGIYNIA-PSLD 336
Query: 362 VDMLED-AELPLESSR 376
D D E+ ++SS+
Sbjct: 337 FDRNPDFEEMIIQSSK 352
>gi|289450496|ref|YP_003475197.1| DNA mismatch repair protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289185043|gb|ADC91468.1| DNA mismatch repair protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 677
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 182/360 (50%), Gaps = 31/360 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I L N++ +G V+ VV+EL N++DAGA + + + N Y++V+DD
Sbjct: 1 MNKIKVLDVQTANSIAAGEVVERPASVVKELCENALDAGAGNIKITIKNGGNSYLQVLDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + L HA TSKL ++D+D+ + T GFRGEALASI+ V+ + +IT+
Sbjct: 61 GCGMTGEDAKLAFLPHA-TSKLSVISDLDN---LDTMGFRGEALASIAAVAKVNLITRTA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
P+ + G K + I +GT + DLF+N P R K+++ + L+ +
Sbjct: 117 DAPSAVTLQVDGGK--WSEITPVGAPIGTCITVEDLFFNTPARFKFLKKDSTE-LNKIID 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFS---FLDEVN-AN 235
V ++AL P VSF E LL T ++ +++ S FG + S L E++ A+
Sbjct: 174 IVQKLALARPDVSFLL--STPERILLHTPGNNDLPSVVFSLFGKQTASELIALPELDMAD 231
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ +++SG I P + S +A Q V++N+R P+H +A + ++++ +
Sbjct: 232 NSPVKVSGLIGQPGAARSSRASQLVFVNNR-----PVH----DIAVTKAIDEAYR--DRL 280
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
+KGK P ++ L P L D+ P K+ V F + V + I+SA + +
Sbjct: 281 MKGK------YPVVIIKLNLPPYLVDINVHPQKSEVRFWNSGTVFNSVYHTIKSALAEDV 334
>gi|283786849|ref|YP_003366714.1| DNA mismatch repair protein [Citrobacter rodentium ICC168]
gi|282950303|emb|CBG89950.1| DNA mismatch repair protein [Citrobacter rodentium ICC168]
Length = 621
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 171/369 (46%), Gaps = 54/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNH-IDEIVR 176
Query: 183 RIALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ D + E L C + L + IE
Sbjct: 177 RIALARFDVTINLSHNGKVVRQYRAVAQDGQKERRLGAICGTP----FLEQALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLRGWVADPNHTTTALAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L PH + D+ P K V F V FI +
Sbjct: 279 RLGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKI 355
+ S +++
Sbjct: 326 VLSVLQQRL 334
>gi|262196403|ref|YP_003267612.1| DNA mismatch repair protein MutL [Haliangium ochraceum DSM 14365]
gi|262079750|gb|ACY15719.1| DNA mismatch repair protein MutL [Haliangium ochraceum DSM 14365]
Length = 762
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 167/352 (47%), Gaps = 39/352 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDDGSG 62
I LP+ V + + +G V+ VV+ELV N++DA AT V V V ++V+D+G G
Sbjct: 22 IRVLPDTVVDQIAAGEVVERPASVVKELVENALDAHATHVNVEVEAGGKQLIRVLDNGIG 81
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ + L RHA TSKL L DD G+GT GFRGEAL SI+ VS + I T+ G+
Sbjct: 82 MTESDVRLALTRHA-TSKLRAL---DDLYGLGTMGFRGEALPSIAAVSRMSITTRTRGQV 137
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + ++G + I + VGT + RDL +N P R K+++ + + H V V
Sbjct: 138 AGTKLDIEGGRITQ--ISEVGAPVGTHIEIRDLLFNVPARLKFLKGNATEASH-VTDSVA 194
Query: 183 RIALVHPKVSFKF-----IDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
++A+VHP+V + + +E+ + A+L S G E L EV+ +
Sbjct: 195 KLAMVHPQVHVRLRHGGRVALEAPQH---SSGLERARAILGSRLGRE----LHEVSGAEN 247
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVC-KGPIHKLLNHLAASFDCSDSWKANNGFL 296
+ ++ Y+++P + S Y+++ R V +G +H + S
Sbjct: 248 GVRVTAYLAAPDLAQSTSRSTYLFVGKRAVKDRGLLHAV------------SMGYGELVP 295
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
KG+ P +L L P D+ P K V F D V A + +R
Sbjct: 296 KGR------FPVAVLCLEVPGGEVDVNVHPQKLEVRFSDGPAVFAAVRHVLR 341
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 21/189 (11%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI 1229
+ Q+D+ ++ + G + ++DQHAA ER+ + LR + + Q L+LP+
Sbjct: 578 IGQLDRTYLVCESNGEMVLVDQHAAHERVAFQRLRDRWAQ-------HAVPVQRLLLPKT 630
Query: 1230 GYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVD 1289
+ L A +D +H G L T L A+P G+ SDV+
Sbjct: 631 -FDLSPEQAAVAEDA--RATLHDMG-------FELEHFGGTTYALKALPA--GLRESDVE 678
Query: 1290 --LLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1347
L E L LA+ GS + L + AC + GD+L E + + L +
Sbjct: 679 TVLHELLDDLAERGGSRALEERLDLALATIACHSVVRAGDALSAQEVRALFKSLDEVDFK 738
Query: 1348 FQCAHGRPT 1356
C HGRP
Sbjct: 739 AHCPHGRPV 747
>gi|402843755|ref|ZP_10892144.1| DNA mismatch repair protein, C-terminal domain protein [Klebsiella
sp. OBRC7]
gi|423106051|ref|ZP_17093752.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5242]
gi|376378837|gb|EHS91594.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5242]
gi|402276273|gb|EJU25388.1| DNA mismatch repair protein, C-terminal domain protein [Klebsiella
sp. OBRC7]
Length = 629
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 177/385 (45%), Gaps = 59/385 (15%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVARLTLTSRTEEQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEIVR 176
Query: 183 RIALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ D + E L C L L + IE
Sbjct: 177 RIALARFDVTINLSHNGKAVRQYRAVSQDGQRERRLGAICG----LPFLEHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L +SG+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLSGWVADPLHTNPTLAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L+ PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLKIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKIAHDSFDVDMLEDAELP 371
+ S + +V + E+ + P
Sbjct: 326 VLS-----VLQQQLEVPLAEEGDEP 345
>gi|345885022|ref|ZP_08836415.1| DNA mismatch repair protein mutL [Prevotella sp. C561]
gi|345042077|gb|EGW46185.1| DNA mismatch repair protein mutL [Prevotella sp. C561]
Length = 629
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 168/349 (48%), Gaps = 32/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV N++DAGAT + + V ++V+DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGATHIDVLVVDAGRTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S L ERH ATSK + DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERH-ATSK---IRKADDLFSLRTMGFRGEALASIAAVAQVELKTRMASED 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + GS+ + G + VG+ + +LF+N P RRK+++S+ + L+++
Sbjct: 121 LGTHLSIAGSR--FTGQEPCSCPVGSNFLVENLFFNVPARRKFLKSNTTE-LNNIITAFE 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
RI LV+P++SF + S L S S ++ FG L ++ + I
Sbjct: 178 RIVLVYPQISFT---LHSNGTELFNLRSCSYRQRIVEVFGKRLNQDLLPIDVDTTLCHIH 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ P + QY ++N RY+ HK + +FD +
Sbjct: 235 GFVGKPEAARKKAPHQYFFVNERYMKHPYFHK---AVLTAFD-------------RLIPQ 278
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAI 347
+ P Y L P D+ P KT + F++ W+ +LA ++ A+
Sbjct: 279 GEQIP-YFLYFDVPAENIDVNIHPTKTEIKFENEQAIWQILLAAVKEAV 326
>gi|408402567|ref|YP_006860531.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|417927537|ref|ZP_12570925.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765411|gb|EGR87937.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|407968796|dbj|BAM62034.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 660
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 192/417 (46%), Gaps = 50/417 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA +++V + + +++ D+
Sbjct: 1 MTKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQVTIDIEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + L L RHA TSK+ +D+ I T GFRGEAL S++ +S + I T
Sbjct: 61 GEGMSPEDLPLSLRRHA-TSKIKSQSDL---FRIRTLGFRGEALPSVASISKITIKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G V G + L ++ VGT + +LFYN P R KYM+S ++ H V
Sbjct: 117 EDNHGSLLVAIGGEIETL--EETSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
V R++L HP+VSF I S+ L S + L I+ +G+ + ++ D
Sbjct: 174 VVNRLSLAHPEVSFILI---SDGRQLTQTSGTGDLRQAIAGIYGLNTAKKMIAISNADLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
E+SGY+S P + + + + + IN RY+ ++ N L G
Sbjct: 231 FEVSGYVSLPELTRANRNYMTILINGRYI-------------------KNFLLNRAILDG 271
Query: 299 KRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
SK P +++++ L D+ P K V ++A I AI + ++
Sbjct: 272 YGSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKERELMALISTAISESLKEQ-- 329
Query: 357 HDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLKNLA----KQRDHMFHKECE 407
D++ DA L S+R S T L PL++ QR+ F KE +
Sbjct: 330 ------DLIPDALENLAKSSTRHFSKPEQTQL---PLQSKGLYYDPQRNDFFVKESD 377
>gi|300310168|ref|YP_003774260.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1]
gi|300072953|gb|ADJ62352.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1]
Length = 627
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 172/355 (48%), Gaps = 32/355 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP+ + + + +G V+ + VV+EL+ N++DAG+T++ V + + + D+G G
Sbjct: 7 IQALPDQLISQIAAGEVIERPSAVVKELLENALDAGSTQITVRLEQGGVKRIAITDNGRG 66
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I + L L RHA TSK+ L D+++ + T GFRGEALASI+ V+ L + ++ P
Sbjct: 67 IPPEQLPLALARHA-TSKIASLTDLEN---VSTLGFRGEALASIASVAQLTVTSRTADAP 122
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
+ + + GS+ + + GTT+ +DL++N P RRK+++S + H + V
Sbjct: 123 HAWE--ITGSQ--FGTVAPASGAQGTTIDVQDLYFNTPARRKFLKSEQTEYGHCA-EVVR 177
Query: 183 RIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
RIAL P VSF + ++ D + +L F LDE + G L +
Sbjct: 178 RIALARPDVSFSLSHNGKTVDHWNVGEFAKRSAHILGDEFANARLP-LDE---SAGPLRL 233
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
G++ P S + QY Y+N R+V KLL H + A L G R
Sbjct: 234 HGFVGLPTASKARADGQYFYVNGRFVRD----KLLTHAVRA--------AYQDVLHGDR- 280
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
PAY L+L +L D+ P K V F+D V F+ A+ A + A
Sbjct: 281 ----YPAYALSLTLDPALVDVNVHPSKIEVRFRDSRAVHQFVFHAVSRALAQTSA 331
>gi|429759391|ref|ZP_19291890.1| DNA mismatch repair protein [Veillonella atypica KON]
gi|429179667|gb|EKY20906.1| DNA mismatch repair protein [Veillonella atypica KON]
Length = 652
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 180/356 (50%), Gaps = 35/356 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGV-CNCYVKVVDD 59
M TI+ L E N + +G V+ VV+EL+ NS+DAGAT + V +G + Y+++ D+
Sbjct: 1 MATIHVLDETTINKIAAGEVVERPASVVKELIENSIDAGATSIEVEIGEGGSAYMRITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + L RH ATSK+ ++ D+ D I + GFRGEALASI+ VS + T+
Sbjct: 61 GKGMTEEDARLAVLRH-ATSKIQNVEDLFD---IASLGFRGEALASIASVSHFILTTRTV 116
Query: 120 GRPNGYRKVMKG---SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
+ G R ++ G + C+ G GTT+ ++LF+N P RRK++++ +
Sbjct: 117 DQELGTRILIDGGTFTDCIPYGAAP-----GTTIEVKELFFNTPARRKFLKTE-RTESSK 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDEL-LCTCSSSSPLALLISSFGIEDFSFLDEVNAN 235
++ V ++AL +P ++FK + +D + + T + S + + +G + + + +
Sbjct: 171 IQDIVGKLALSNPHIAFK---LTIDDRVAIITPGTGSIQDTVAALYGYKTKNDIFPIAYE 227
Query: 236 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
+ I G +S P S + +Q + +N+R + I K ++ + + +G+
Sbjct: 228 SEHIYIEGVVSKPTLLKSTRIWQTIIVNNRVISDKTILKAID------NAYHALLPKSGY 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P LL++ P S+ D+ P K+ V F+D + + + AI +A
Sbjct: 282 -----------PLVLLHITVPASMVDINVHPRKSEVKFEDDKIIFKAVYHAILNAL 326
>gi|288937531|ref|YP_003441590.1| DNA mismatch repair protein MutL [Klebsiella variicola At-22]
gi|288892240|gb|ADC60558.1| DNA mismatch repair protein MutL [Klebsiella variicola At-22]
Length = 619
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 174/369 (47%), Gaps = 54/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ K I D + E L C + A L + IE
Sbjct: 177 RIALARFDVTINLNHNGKVIRQYRAVAQDGQRERRLGTICGA----AFLEHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLRGWVADPLHTTPALAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKI 355
+ S +++
Sbjct: 326 VLSVLQQQL 334
>gi|450100397|ref|ZP_21858753.1| DNA mismatch repair protein [Streptococcus mutans SF1]
gi|450171966|ref|ZP_21884322.1| DNA mismatch repair protein [Streptococcus mutans SM4]
gi|449220470|gb|EMC20340.1| DNA mismatch repair protein [Streptococcus mutans SF1]
gi|449243283|gb|EMC41728.1| DNA mismatch repair protein [Streptococcus mutans SM4]
Length = 651
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|418020539|ref|ZP_12659788.1| DNA mismatch repair protein MutL [Candidatus Regiella insecticola
R5.15]
gi|347604098|gb|EGY28815.1| DNA mismatch repair protein MutL [Candidatus Regiella insecticola
R5.15]
Length = 612
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 174/359 (48%), Gaps = 34/359 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP + N + +G V+ VV+EL+ NS+DAGA + + + G + +++ D+G+G
Sbjct: 3 IKMLPPQITNQIAAGEVVERPASVVKELLENSLDAGAKWIDINIKGGGSKLIRIQDNGTG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I++D L L RHA TSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IAKDDLPLALARHA-TSKISAL---DDLMTIRSMGFRGEALASISSVSRLLLTSRTVEQT 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G L + I VG+T+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQSYAEGRDML-VKIKPAAHPVGSTLEVFDLFYNTPARRKFMRTEKTEFAH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLA----LLISSFGIEDFSFLDEVNANDGA 238
RIAL H V+ I + ++L+ + S A L S G + ++
Sbjct: 177 RIALAHFDVT---IHLHHNEKLIRQYRAVSDPARYSQRLASVCGNVFLQHMLAISWQHED 233
Query: 239 LEISGYISSP---YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 295
L I G+++ P +++ S+ QY Y+N+R + +L+NH +A G
Sbjct: 234 LAIHGWLADPQMLHNARSLNEIQYCYVNNRVIRD----RLINHAIR--------QAYQGL 281
Query: 296 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
SK AY+L L S D+ P K V F V FI +A+ A K
Sbjct: 282 -----SKDGQQIAYVLYLTIEPSQVDINVHPAKHEVRFHQARLVHDFIYQAVTMALQDK 335
>gi|444914772|ref|ZP_21234912.1| DNA mismatch repair protein MutL [Cystobacter fuscus DSM 2262]
gi|444714281|gb|ELW55166.1| DNA mismatch repair protein MutL [Cystobacter fuscus DSM 2262]
Length = 620
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 169/358 (47%), Gaps = 31/358 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M + RL + + N + +G V+ VV+ELV NS+DAG+ V V + + + DD
Sbjct: 1 MARVARLSDVLINKIAAGEVVERPASVVKELVENSIDAGSRTVRVALERGGLGRITISDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + L ERHA TSKL ++DD + T GFRGEAL +I+ VS + T
Sbjct: 61 GQGMSAEDARLSLERHA-TSKL---RELDDLFTLSTKGFRGEALPAIASVSRFTLHTAER 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R ++G +++ VGT + DLFYN P RRK+M+ ++ H+ ++
Sbjct: 117 ESYVGTRITVEGGGEPL--VEEAPPRVGTVISVEDLFYNTPARRKFMRRESTELQHA-EE 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V+R+AL HP VSF F++ + S + + ++ G L V +
Sbjct: 174 AVIRLALAHPDVSF-FVEHGGQALFTSPASPTDARERIAAALGPGVHPHLVAVEERRLGV 232
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
++GYI+SP ++ Y ++N RY+ + LN S +A FL
Sbjct: 233 NVTGYIASPEYTLPNARGIYTFVNRRYIRD----RGLN--------SAIQRAFQEFLAAG 280
Query: 300 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-WM 352
R P +L + D+ P K V F D + V A I RA+R+A W+
Sbjct: 281 RQ-----PVVVLFIDMDPRAVDVNVHPQKLEVRFADAKGVGDAVNAAISRALRAAPWL 333
>gi|397904384|ref|ZP_10505300.1| DNA mismatch repair protein MutL [Caloramator australicus RC3]
gi|397162604|emb|CCJ32634.1| DNA mismatch repair protein MutL [Caloramator australicus RC3]
Length = 609
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 177/357 (49%), Gaps = 37/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ VV+EL+ NS+DAGA+ + V + G+ +K+
Sbjct: 1 MSKIRILDDDLITKIAAGEVVERPASVVKELIENSIDAGASIIEVEIENGGIS--LIKIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI +D + + RH TSK+ + DD I T GFRGEALASI VS +E+ITK
Sbjct: 59 DNGHGIEKDDVEIAFLRHT-TSKI---KNEDDLYNIRTLGFRGEALASICAVSKVEMITK 114
Query: 118 AHGRPNGYRKVMKGSKC---LYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G + ++G + + G D GTT++ +DLFYN P R K+++ +P +
Sbjct: 115 TKDDLTGTKIYIEGGEIIDKIECGAPD-----GTTIIVKDLFYNTPARLKFLK-TPSREA 168
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
V + V +AL +SFK+ + + T + L ++S +G + L +++
Sbjct: 169 MIVSEIVQSLALSKENISFKY--KNNGKIVFATKGDGNLLNAILSLYGRQVKDNLLKIDY 226
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
+ ++I GYI + + + +Q ++IN R + I+ + ++ S+ SD +
Sbjct: 227 EENDIKIEGYIGNNALGKNNRNYQTLFINGRLIKNKTINAAIENVYRSYSTSDKF----- 281
Query: 295 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
P Y++ + L D+ P K V F++ + + + +A+++A+
Sbjct: 282 ------------PFYVVKIIMNPQLIDVNVHPTKAEVKFQNDQEIYRLVYKALQNAF 326
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 37/200 (18%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERI----RLEELRHKVLSGEG----KSVAYLDAE 1221
+ Q+ +I A +IDQHAA ERI L+E + + + K + ++
Sbjct: 425 IGQIHLTYIIAEAENEFYIIDQHAAHERILYEKYLDEYQRTAIHSQTLLTPKIIDLKTSD 484
Query: 1222 QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF 1281
+E +L I +NFA+ G++ I G S I+L +VP I+
Sbjct: 485 KEFLLENI-----ENFAK----IGFV--IEDFGGNS--------------ISLRSVPVIY 519
Query: 1282 GVNLSDVDLL-EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1340
G N + +D+ E L ++ + G S+ +++ + AC+GAI GD L SE ++++
Sbjct: 520 G-NPNYIDVFNEILNEIVQSSGGFLN--SINKIIYTMACKGAIKAGDKLTLSEMNKLIDD 576
Query: 1341 LKQTSLCFQCAHGRPTTVPL 1360
L++ + C HGRPT + +
Sbjct: 577 LRRCKNPYSCPHGRPTLIRM 596
>gi|338732065|ref|YP_004670538.1| DNA mismatch repair protein mutL [Simkania negevensis Z]
gi|336481448|emb|CCB88047.1| DNA mismatch repair protein mutL [Simkania negevensis Z]
Length = 571
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 181/388 (46%), Gaps = 48/388 (12%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
TI+ L E N + +G V+ + VV+EL+ N+VDA AT+V V + G + V D+G
Sbjct: 4 TIHVLSEETINLIAAGEVIENPASVVKELLENAVDAEATRVTVEIQGGGFKLLSVSDNGK 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+SRD L+L ERH ATSK + DD T I + GFRGEALASI+ +S + I +
Sbjct: 64 GMSRDDLLLCIERH-ATSK---IRIADDLTSIFSMGFRGEALASIAAISKMRITSCRKDD 119
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
N + +G K L + ++ GTTV LFYN P RRK+ Q S + +S+ K +
Sbjct: 120 AN--KLYAEGGKIQSL--EPATRNPGTTVAVHALFYNVPARRKF-QKSAQSCQNSIVKML 174
Query: 182 LRIALVHPKVSFK-----------FIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD 230
++AL HP + K F+ E E++ ++ G E
Sbjct: 175 TKLALAHPFLEVKCIADGKEVFSSFMKRSKEKEVVTH-------DVIEKVLGAEFLEGTS 227
Query: 231 EVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWK 290
EV+ + + G+I SP+ KA QY+++N R + I + +
Sbjct: 228 EVHHQEHGCFLHGFIGSPHGCRKSKAGQYLFVNGRAIQSAEISRAI-------------- 273
Query: 291 ANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
G+ G R P ++L+L P D+ P KT + + + + + + A
Sbjct: 274 -YEGY--GTRLPLNEHPTFVLHLTLPSQWIDVNVHPQKTEIRLHESSEIEHVVRKGVFEA 330
Query: 351 WMKKIAHDSFDVDMLEDA---ELPLESS 375
++++ + + E + E PLE++
Sbjct: 331 LQRELSSNPTNHPKFETSFAWEGPLETT 358
>gi|449955935|ref|ZP_21809351.1| DNA mismatch repair protein [Streptococcus mutans 4VF1]
gi|450139694|ref|ZP_21872621.1| DNA mismatch repair protein [Streptococcus mutans NLML1]
gi|449170868|gb|EMB73558.1| DNA mismatch repair protein [Streptococcus mutans 4VF1]
gi|449232639|gb|EMC31742.1| DNA mismatch repair protein [Streptococcus mutans NLML1]
Length = 651
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|195978975|ref|YP_002124219.1| DNA mismatch repair protein [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|238689788|sp|B4U0J7.1|MUTL_STREM RecName: Full=DNA mismatch repair protein MutL
gi|195975680|gb|ACG63206.1| DNA mismatch repair protein MutL [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 660
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 191/414 (46%), Gaps = 46/414 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M TI LPE + N + +G V+ VV+ELV N++DA ++++ V + +++ D+
Sbjct: 1 MTTIIELPEVLANQIAAGEVIERPASVVKELVENAIDAKSSQITVEIEESGLKMMQITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S + L L RH ATSK+ +D+ I T GFRGEAL S++ +S L I T
Sbjct: 61 GEGMSHEDLPLSLRRH-ATSKIKSQSDL---FRIRTLGFRGEALPSVASISKLTIKTATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+G V G K L + VGT + +LFYN P R KYM+S ++ H V
Sbjct: 117 EAEHGSILVASGGKIEQL--EAVSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHVV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPL-ALLISSFGIEDFSFLDEVNANDGA 238
V R++L HP+++F I S+ + L S + L L +G+ + ++++ D
Sbjct: 174 VVNRLSLAHPEIAFTLI---SDGKQLTQTSGTGDLRQALAGIYGLNTAKKMIDISSADLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
E+ G++S P + + + + + IN RY+ ++ N L G
Sbjct: 231 FEVGGFVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDG 271
Query: 299 KRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
SK P +++++ L D+ P K + ++A I AI + ++
Sbjct: 272 YGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEIRISKERELMALISTAISESLREQ-- 329
Query: 357 HDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC 406
D++ DA L S +S Q+S L S L Q++ F KE
Sbjct: 330 ------DLIPDALENLARSSTRSFSKPEQTSLPLQPSQLY-YDPQKNDFFTKET 376
>gi|449947079|ref|ZP_21807190.1| DNA mismatch repair protein [Streptococcus mutans 11SSST2]
gi|449169043|gb|EMB71832.1| DNA mismatch repair protein [Streptococcus mutans 11SSST2]
Length = 651
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|407694611|ref|YP_006819399.1| DNA mismatch repair protein mutL [Alcanivorax dieselolei B5]
gi|407251949|gb|AFT69056.1| DNA mismatch repair protein mutL [Alcanivorax dieselolei B5]
Length = 615
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 178/369 (48%), Gaps = 29/369 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ V++EL+ N++DAGA ++ V V ++V DD
Sbjct: 1 MSKIQLLDSRLANQIAAGEVVERPASVLKELLENALDAGARQITVDVEQGGTKLIRVRDD 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI RD L L RHA TSK+ H+A+ D IGT GFRGEALA+IS VS L + +
Sbjct: 61 GGGIERDELPLALSRHA-TSKI-HVAE--DLEAIGTLGFRGEALAAISSVSRLSLTSNIG 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ G+ V++G + + + GTTV RDLF+N P RR+++++ + H +++
Sbjct: 117 EQAEGWEVVVEG-RDMAPSVTPAGHPRGTTVTMRDLFFNTPARRRFLRTEKTEFNH-LEE 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNAND 236
RIAL + F+ + L + + + A ++ +F+++ V+ +
Sbjct: 175 VFRRIALSEFQTGFRLSHNQKVVHQLPSGDNEALRAARVARLC--GSAFMEQSMPVDVSH 232
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
L + G++ P S S QY Y+N R + K+++H +A + L
Sbjct: 233 AGLRLHGWLGLPTFSRSQSDLQYFYVNGRVIRD----KVVSHAVR--------QAYSDVL 280
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 356
R PA++L L +L D+ P K V F++ V F+ R + A +
Sbjct: 281 YHGRH-----PAFVLFLELDPALVDVNVHPTKHEVRFREQRMVHDFLYRTLHRAIAEVRP 335
Query: 357 HDSFDVDML 365
D DV L
Sbjct: 336 ADRLDVPEL 344
>gi|387787013|ref|YP_006252109.1| DNA mismatch repair protein [Streptococcus mutans LJ23]
gi|379133414|dbj|BAL70166.1| DNA mismatch repair protein [Streptococcus mutans LJ23]
Length = 651
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|224826520|ref|ZP_03699621.1| DNA mismatch repair protein MutL [Pseudogulbenkiania ferrooxidans
2002]
gi|224601121|gb|EEG07303.1| DNA mismatch repair protein MutL [Pseudogulbenkiania ferrooxidans
2002]
Length = 629
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 169/345 (48%), Gaps = 30/345 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ LP+ + N + +G V+ ++E++ NS+DAGA ++ V + ++V D+
Sbjct: 1 MKRIHALPDHLVNQIAAGEVVERPASALKEMLENSLDAGADRITVDLAQGGIKLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI D L L +RHA TSK+ LAD++ + T GFRGE LASI+ VS L +I++ H
Sbjct: 61 GGGIVPDDLPLALDRHA-TSKIASLADLES---VATLGFRGEGLASIASVSRLTLISRPH 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
+ Y +++ L+ ++ GT+V DL++N P RRK+++S + H
Sbjct: 117 EEAHAY-QIIAIDGALH-SVEPAAHAPGTSVEVVDLYFNTPARRKFLKSENTEYAHCA-A 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDF-SFLDEVNANDGA 238
RIAL HP+V F + +++ + S LA + + +DF + G
Sbjct: 174 TFERIALAHPQVEFL---LRHNGKVVWRLPAQS-LAERVGALLGKDFVEAALPLETAAGG 229
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L+++G+++SP S + + QY Y+N R+V L +A L
Sbjct: 230 LQLAGFVASPTYSKASRDAQYFYVNGRFVRDKTAQHALR------------QAYRDVLHH 277
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 343
R PAY L L + D+ P K V F++ + + F+
Sbjct: 278 DRH-----PAYALFLTIDPAGVDVNVHPTKIEVRFRESQAIHQFL 317
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 25/175 (14%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1245
L V+D HAA ERI E L++ + E S+ Q L+LP +FA D
Sbjct: 459 LIVVDMHAAHERIVYERLKNAL---EADSIPM----QPLLLP-------VSFA---ADRM 501
Query: 1246 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQ-LADTDGSS 1304
+H G + L T I + VP V L D + +E + L D
Sbjct: 502 EAATVHEHGEEMKRLGVELAPLSPTQIAVRGVP----VWLKDGNPVELARAVLKDVREFG 557
Query: 1305 TTPPSVLR---VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
T R +L + AC GA+ L +E ++ +++ T QC HGRPT
Sbjct: 558 LTRVLTERRNELLATMACHGAVRANRQLTLAEMNALLRDMEATERSGQCNHGRPT 612
>gi|194445394|ref|YP_002043614.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|418807991|ref|ZP_13363548.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418811724|ref|ZP_13367249.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418816730|ref|ZP_13372222.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418822320|ref|ZP_13377733.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418824758|ref|ZP_13380100.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|418833097|ref|ZP_13388030.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418833976|ref|ZP_13388887.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418841352|ref|ZP_13396171.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418848589|ref|ZP_13403327.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418854644|ref|ZP_13409312.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|238693596|sp|B4T2R5.1|MUTL_SALNS RecName: Full=DNA mismatch repair protein MutL
gi|194404057|gb|ACF64279.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|392777819|gb|EJA34501.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392778292|gb|EJA34972.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392787995|gb|EJA44533.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392790091|gb|EJA46593.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392796566|gb|EJA52898.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392805884|gb|EJA61999.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392808681|gb|EJA64729.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392819955|gb|EJA75811.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392822889|gb|EJA78693.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392824499|gb|EJA80285.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
Length = 618
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 173/368 (47%), Gaps = 54/368 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT+V + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I ++ L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKEELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQA 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ K + + + +
Sbjct: 119 EAWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIR 176
Query: 183 RIALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+F K + D + E L C + L + IE
Sbjct: 177 RIALARFDVTFNLSHNGKLVRQYRAVAKDGQKERRLGAICGTP----FLEQALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLRGWVADPNHTTTALTEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKK 354
+ S ++
Sbjct: 326 VLSVLQQQ 333
>gi|423111894|ref|ZP_17099588.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5243]
gi|376375992|gb|EHS88777.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5243]
Length = 631
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 172/369 (46%), Gaps = 54/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVARLTLTSRTEDQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEIVR 176
Query: 183 RIALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ D + E L C L L + IE
Sbjct: 177 RIALARFDVTINLSHNGKAVRQYRAVSQDGQRERRLGAICG----LPFLEHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L +SG+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLSGWVADPLHTNPTLAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L+ PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLKIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKI 355
+ S +++
Sbjct: 326 VLSVLQQQL 334
>gi|450034421|ref|ZP_21834376.1| DNA mismatch repair protein [Streptococcus mutans M21]
gi|449196524|gb|EMB97789.1| DNA mismatch repair protein [Streptococcus mutans M21]
Length = 651
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I + EL T L +GI + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLI--KDGRELTKTAGKGDLHQALAGIYGITTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|449876161|ref|ZP_21782635.1| DNA mismatch repair protein [Streptococcus mutans S1B]
gi|450005600|ref|ZP_21826761.1| DNA mismatch repair protein [Streptococcus mutans NMT4863]
gi|450088209|ref|ZP_21854688.1| DNA mismatch repair protein [Streptococcus mutans NV1996]
gi|449188391|gb|EMB90103.1| DNA mismatch repair protein [Streptococcus mutans NMT4863]
gi|449216758|gb|EMC16850.1| DNA mismatch repair protein [Streptococcus mutans NV1996]
gi|449252969|gb|EMC50936.1| DNA mismatch repair protein [Streptococcus mutans S1B]
Length = 651
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|375258562|ref|YP_005017732.1| DNA mismatch repair protein [Klebsiella oxytoca KCTC 1686]
gi|365908040|gb|AEX03493.1| DNA mismatch repair protein [Klebsiella oxytoca KCTC 1686]
Length = 629
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 177/385 (45%), Gaps = 59/385 (15%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVARLTLTSRTEEQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEIVR 176
Query: 183 RIALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ D + E L C L L + IE
Sbjct: 177 RIALARFDVTINLSHNGKAVRQYRAVSQDGQRERRLGAICG----LPFLEHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L +SG+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLSGWVADPLHTNPTLAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L+ PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLKIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKIAHDSFDVDMLEDAELP 371
+ S + +V + E+ + P
Sbjct: 326 VLS-----VLQQQLEVPLAEEGDEP 345
>gi|307292184|ref|ZP_07572049.1| DNA mismatch repair protein [Enterococcus faecalis TX0411]
gi|306496759|gb|EFM66311.1| DNA mismatch repair protein [Enterococcus faecalis TX0411]
Length = 710
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 169/354 (47%), Gaps = 37/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+++ ++ +RH ATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRH-ATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L +
Sbjct: 117 EEEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LAN 170
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 171 IGDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 229 LDFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIV 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 348
G SK P +L + L D+ P K V + ++A IE+ I+
Sbjct: 270 AGYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQTIQ 323
>gi|449919047|ref|ZP_21797683.1| DNA mismatch repair protein [Streptococcus mutans 1SM1]
gi|449159744|gb|EMB63056.1| DNA mismatch repair protein [Streptococcus mutans 1SM1]
Length = 651
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI + +++ RHA TSK+ +D+ I T GFRGEAL SI+ +S L + T
Sbjct: 61 GQGIEQADVIMSLRRHA-TSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATK 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 176
G +G + G K I+ E +GT V +LF+N P R KYM+S ++ H
Sbjct: 117 GEIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHI 171
Query: 177 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
+ + R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 172 I-DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNAD 228
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 229 LDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 269
Query: 297 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 270 DGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|340621607|ref|YP_004740059.1| DNA mismatch repair protein mutL [Capnocytophaga canimorsus Cc5]
gi|339901873|gb|AEK22952.1| DNA mismatch repair protein mutL [Capnocytophaga canimorsus Cc5]
Length = 608
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 168/350 (48%), Gaps = 28/350 (8%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGS 61
I LP+ V N + +G V+ V+EL+ N++DA +T++ + V+V+D+G
Sbjct: 4 VIRLLPDHVANQIAAGEVIQRPASAVKELLENAIDAQSTEIKLIIKDAGKTLVQVIDNGI 63
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
G+S L ERHA TSK+ +D + T GFRGEALASI+ ++ +E+ITK
Sbjct: 64 GMSVTDARLAFERHA-TSKI---QSAEDLFTLRTKGFRGEALASIAAIAHVEMITKRAAD 119
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
++GSK Y + GT+V ++LF+N P RR +++S ++ H + +
Sbjct: 120 ELATEIRVEGSKFTYQ--EPCVAGNGTSVAMKNLFFNIPARRNFLKSDSVELRHIIDEF- 176
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 241
R+AL HP + F + SE L S+ +++ FG++ L + ++I
Sbjct: 177 HRVALAHPNIHFYMYNNGSE---LFNLPVSNFRQRVVNLFGVKTNEKLVPIEEETPVVKI 233
Query: 242 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 301
SG++ P K Q++ +N R++ + LNH A G L
Sbjct: 234 SGFVVKPEHVKKTKPLQFLLVNDRFIRS----RYLNHAITL--------AYEGLL----- 276
Query: 302 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SQ P Y + L + D+ P KT + F+D + A ++ A++ A
Sbjct: 277 ASQVQPEYFIRLEMNPATIDINIHPTKTEIKFEDEHTIYAMLKSAVKHAL 326
>gi|292669798|ref|ZP_06603224.1| DNA mismatch repair protein MutL [Selenomonas noxia ATCC 43541]
gi|292648595|gb|EFF66567.1| DNA mismatch repair protein MutL [Selenomonas noxia ATCC 43541]
Length = 620
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 166/338 (49%), Gaps = 29/338 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+ELV N++DAGA V V + G +++V D+
Sbjct: 1 MTRIHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGAAAVEVEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++R RHA TSK+ ++D+ + T GFRGEAL +I+ VS ++T+
Sbjct: 61 GHGMARADAQTAILRHA-TSKIASVSDLQ---MVATLGFRGEALPTIASVSRFSLLTRQP 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G K I+D ++GTTV DLF+N P R+K+++++ + +
Sbjct: 117 ADDLGTRVDILGGKTPE--IEDAGCEIGTTVRVEDLFFNTPARKKFLKTNATEA-GRISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA- 238
V+R+AL P ++F+FI+ + L T S + S +G + + L ++ +D
Sbjct: 174 FVIRLALSRPDIAFRFIN--NNRLTLMTAGDGSLRHAIESIYGGDAAAALIPLDFHDAEA 231
Query: 239 -LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ I+GYIS P S +A+Q +N R + I K ++ + + GF
Sbjct: 232 DIRITGYISKPSMIRSSRAWQTYIVNGRTIQNRAIAKAID------NVYRALVPKMGF-- 283
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD 335
P +L + P D+ P KT + F+D
Sbjct: 284 ---------PLAVLCIEVPQRTIDVNVHPQKTELKFED 312
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 50/204 (24%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1216
+ QVD +I + TL +IDQHAA ERI + L H +LS +
Sbjct: 434 IGQVDLTYIIAQSAQTLYIIDQHAAHERILFDRFSAHADGIPSQQMLVHAILSFDAHEAQ 493
Query: 1217 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
Y++ EL +G+ L G R + L
Sbjct: 494 YIEENAEL-FDRLGFHL-----------------EPAGEREYR--------------LTE 521
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV--LNSKACRGAIMFGDSLLPSEC 1334
P ++ ++ + E L L D ++ P+ LR + + ACR AI G+ L +
Sbjct: 522 APADIPLDEAEATIREILISLGDLHAAT---PAHLRQAGIATMACRAAIKAGEELSIRQM 578
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTV 1358
++++EL+ T F C HGRPT +
Sbjct: 579 EILLDELRATPFPFTCPHGRPTIL 602
>gi|320539679|ref|ZP_08039343.1| putative methyl-directed mismatch repair protein [Serratia
symbiotica str. Tucson]
gi|320030291|gb|EFW12306.1| putative methyl-directed mismatch repair protein [Serratia
symbiotica str. Tucson]
Length = 620
Score = 126 bits (317), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 168/350 (48%), Gaps = 33/350 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT + + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATCIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ + +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARHA-TSKI---STLDDLEAIVSLGFRGEALASISSVSRLSLTSRTAEQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ ++G + + VG+T+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYVEGCDQ-TVTVKPAAHPVGSTLAVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPL----ALLISSFGIEDFSFLDEVNANDGA 238
RIAL V+ I++ +L+ ++ L S G+ ++ G
Sbjct: 177 RIALARFDVA---INLSHNGKLIRQYRAAKEKNQHERRLSSICGLAFLQHALNLSWQHGE 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P + + QY Y+NSR + +L+NH A D K N
Sbjct: 234 LSICGWVADPAGARQLGEIQYCYVNSRMMRD----RLINH-AIRQAYQDQLKDNQQ---- 284
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 285 --------PAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|345019806|ref|ZP_08783419.1| DNA mismatch repair protein [Ornithinibacillus scapharcae TW25]
Length = 616
Score = 126 bits (317), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 190/395 (48%), Gaps = 38/395 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I ++P+A+ N + +G V+ VV+ELV NS+DAG+T + V V +++ DDG G
Sbjct: 3 IYQMPDALANKIAAGEVVERPASVVKELVENSIDAGSTWIKVDVNEAGLELIRITDDGEG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ D + RH ATSK+ + +D+ + T GFRGEALASI+ VS LEI T + G
Sbjct: 63 MAEDDVERAFLRH-ATSKIRNESDL---FHVQTLGFRGEALASIASVSRLEIKT-SQGDS 117
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G ++G + G D RK GT + DLFYN P R KYM++ ++ H + +
Sbjct: 118 AGTFLSLEGGNVVDRGKSDARK--GTEITVSDLFYNTPARLKYMKTIHTELGH-ITDLLN 174
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL HP+V F+ + L T + L ++ +G+ + V ++S
Sbjct: 175 RLALSHPEVRFE--ATHNGKPLFKTPGTGDLLQVIAQIYGMGVARKMLPVEEETLDFKVS 232
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
GYI+ P + + +++ + +N R++ P+ + + + + L RS
Sbjct: 233 GYIAKPEITRASRSYVSIILNGRFIKSIPLTQAI------------IRGYHTLLPIGRS- 279
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
P +L + L D+ P K F + + +E IR + +
Sbjct: 280 ----PIVVLQIEMDPILVDVNVHPTKLEARFSKDKELYLLVEELIRKTFRQTRL------ 329
Query: 363 DMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQ 397
+ E + P+E R QS+Q++ ++ K +AK+
Sbjct: 330 -IPEIPQKPIEKPR-QSYQNTIDFDTA--KPIAKE 360
>gi|338174364|ref|YP_004651174.1| DNA mismatch repair protein MutL [Parachlamydia acanthamoebae UV-7]
gi|336478722|emb|CCB85320.1| DNA mismatch repair protein mutL [Parachlamydia acanthamoebae UV-7]
Length = 620
Score = 126 bits (317), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 172/369 (46%), Gaps = 48/369 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
+ I L E N + +G V+ + VV+E+V N++DAG+T++ V + +++ D+
Sbjct: 2 LSKIRILDEHTINKIAAGEVIENPASVVKEIVENAIDAGSTEICVEIQEGGRQLIRISDN 61
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+++D +L ERH ATSKL + DM+ + T GFRGEA+ SI+ +S ++T
Sbjct: 62 GCGMTQDDALLSLERH-ATSKLREVEDME---ALATMGFRGEAIPSIAAISKFMLLT-CP 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDER-----KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
P KG+ L G R + GTTV + LF+N PVRRK+ Q SP
Sbjct: 117 ATPESGSNDXKGTLILVEGGKILRCCPAARSPGTTVEIKSLFFNVPVRRKF-QKSPTYDA 175
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
+ + K + AL HP + F+ I + + LL T +S P +SF + + V
Sbjct: 176 NEILKILTMQALAHPDIQFELIS--NHETLLKTPTSKQP-----ASFAEKLSDRIGSVLG 228
Query: 235 NDGALE------------ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAAS 282
+D A E I+GYI P S +A Q+++IN R V I
Sbjct: 229 HDLAQEICFIEGEKEGCKITGYIGFPSXSRPNRACQFLFINQRXVTSPAI---------- 278
Query: 283 FDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF 342
S+ G+ G + P ++L+L P +L D+ P K V + +
Sbjct: 279 -----SFAVREGY--GTALATNRHPLFILHLSLPGTLVDVNVHPQKKEVRLRQEAMIKEL 331
Query: 343 IERAIRSAW 351
I A++ A
Sbjct: 332 IISAVQKAL 340
>gi|422343284|ref|ZP_16424212.1| hypothetical protein HMPREF9432_00272 [Selenomonas noxia F0398]
gi|355378591|gb|EHG25771.1| hypothetical protein HMPREF9432_00272 [Selenomonas noxia F0398]
Length = 621
Score = 126 bits (317), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 166/338 (49%), Gaps = 29/338 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+ELV N++DAGA V V + G +++V D+
Sbjct: 1 MTRIHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGAAAVEVEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++R RHA TSK+ ++D+ + T GFRGEAL +I+ VS ++T+
Sbjct: 61 GHGMARADAQTAILRHA-TSKIASVSDLQT---VATLGFRGEALPTIASVSRFSLLTRQP 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G R + G K I+D ++GTTV DLF+N P R+K+++++ + +
Sbjct: 117 ADDLGTRVDILGGKTPE--IEDAGCEIGTTVRVEDLFFNTPARKKFLKTNATEA-GRISD 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA- 238
V+R+AL P ++F+FI+ + L T S + S +G + + L ++ +D
Sbjct: 174 FVIRLALSRPDIAFRFIN--NNRLTLMTAGDGSLHHTIESIYGGDAAAALIPLDFHDAEA 231
Query: 239 -LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
+ I+GYIS P S +A+Q +N R + I K ++ + + GF
Sbjct: 232 DIRITGYISKPSMIRSSRAWQTYIVNGRTIQNRAIAKAID------NVYRALVPKMGF-- 283
Query: 298 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD 335
P +L + P D+ P KT + F+D
Sbjct: 284 ---------PLAVLCIEVPQRTIDVNVHPQKTELKFED 312
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 80/204 (39%), Gaps = 50/204 (24%)
Query: 1170 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1216
+ QVD +I + TL +IDQHAA ERI + L H +LS +
Sbjct: 435 IGQVDLTYIIAQSAQTLYIIDQHAAHERILFDRFSAHADGIPSQQMLVHAILSFDAHEAQ 494
Query: 1217 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1276
Y++ EL +G+ L G R + L
Sbjct: 495 YIEENAEL-FDRLGFHL-----------------EPAGEREYR--------------LTE 522
Query: 1277 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV--LNSKACRGAIMFGDSLLPSEC 1334
P ++ ++ + E L L D ++ P+ LR + + ACR AI G+ L +
Sbjct: 523 APADIPLDEAEATIREILISLGDLHAAT---PAHLRQAGIATMACRAAIKAGEELSIRQM 579
Query: 1335 ALIVEELKQTSLCFQCAHGRPTTV 1358
+++ EL T F C HGRPT +
Sbjct: 580 EILLAELCATPFPFTCPHGRPTIL 603
>gi|423117550|ref|ZP_17105241.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5245]
gi|376375680|gb|EHS88466.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5245]
Length = 631
Score = 126 bits (317), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 172/369 (46%), Gaps = 54/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVARLTLTSRTEDQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEIVR 176
Query: 183 RIALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ D + E L C L L + IE
Sbjct: 177 RIALARFDVTINLSHNGKAVRQYRAVSQDGQRERRLGAICG----LPFLEHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L +SG+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLSGWVADPLHTNPTLAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L+ PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLKIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKI 355
+ S +++
Sbjct: 326 VLSVLQQQL 334
>gi|94500524|ref|ZP_01307055.1| DNA mismatch repair protein [Bermanella marisrubri]
gi|94427314|gb|EAT12293.1| DNA mismatch repair protein [Bermanella marisrubri]
Length = 634
Score = 126 bits (317), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 172/358 (48%), Gaps = 37/358 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ L + N + +G V+ VV+ELV NS+DAGAT++ V +++ D+
Sbjct: 1 MKRIHVLSPRLANQIAAGEVVERPANVVKELVENSLDAGATRIEVDAEQGGVKLIRIRDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
GSGI +D L L RHA TSK+ D+DD + + GFRGEALASI+ VS L + +
Sbjct: 61 GSGIEKDDLPLSLSRHA-TSKI---VDLDDLESVQSLGFRGEALASIASVSRLSLSSHEQ 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
Y+ +G + + + VGTTV RDLF+N P RRK++++ + H +++
Sbjct: 117 ESELAYQVTAEG-RDMATEVKPCAHPVGTTVEMRDLFFNTPARRKFLRTEKTEFNH-LEE 174
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSS----SPLALLISSFGIEDFSFLDE---V 232
V R+AL VSF+ L CSS+ +A L+S+ F+ E +
Sbjct: 175 VVKRMALSRYDVSFQLRHNNKVIHSLRPCSSAFDQEKRIATLLSA------QFMKEAVRI 228
Query: 233 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 292
+ L++ G++ P + S QY ++N R V KL+ H +
Sbjct: 229 DMEAAGLKLWGWVGLPTFNRSQADMQYFFVNGRIVRD----KLVAH-------AIRQAYQ 277
Query: 293 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
+ G+ S A++L L +L D+ P K V F+D V F+ R + A
Sbjct: 278 DVLYHGRHS------AFVLYLELDPALVDVNVHPTKHEVRFRDGRLVHDFLFRTLHKA 329
Score = 40.8 bits (94), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 29/177 (16%)
Query: 1186 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQ--NFAEQ--- 1240
L V+D HAA ERI E L+ ++ + + + Q L++PE + ++ + AEQ
Sbjct: 464 LVVVDMHAAHERITYERLK---MTYDAQGIQ----SQPLLVPETIHVSVEQADIAEQHEA 516
Query: 1241 -IKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLAD 1299
I+ G+ + G S L+ RQ+ V+ + N+ + +++ L+
Sbjct: 517 DIQKLGF--QLQRLGPES------LVIRQMPVL-------LKNANIEHL-VVKVLEDYRT 560
Query: 1300 TDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1356
S +L+S AC G++ L +E ++ +++QT QC HGRPT
Sbjct: 561 AGSSRHMTEFRNEILSSMACHGSVRANRQLTIAEMNGLLRDMEQTERSGQCNHGRPT 617
>gi|295706199|ref|YP_003599274.1| DNA mismatch repair protein MutL [Bacillus megaterium DSM 319]
gi|294803858|gb|ADF40924.1| DNA mismatch repair protein MutL [Bacillus megaterium DSM 319]
Length = 625
Score = 126 bits (317), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 181/393 (46%), Gaps = 42/393 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV N++DA +T + + + ++++D+
Sbjct: 1 MGKIVQLSDELSNKIAAGEVVERPASVVKELVENAIDANSTVIEIELEEAGLSKIRILDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + + +RHA TSK+ D+ I T GFRGEAL SI+ VS+LE+ T
Sbjct: 61 GDGIASEDCLTAFKRHA-TSKIKTEQDL---FRIRTLGFRGEALPSIASVSMLELKTST- 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G ++G + ++ + RK GT +V +LF+N P R KYM++ + L +V
Sbjct: 116 GEEAGTHLKLRGGEIVHHELTSSRK--GTELVIENLFFNTPARLKYMKTVNTE-LGNVTD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+A+ HP+VS + M +LL T S +L + +G+ + +N
Sbjct: 173 VVNRLAMSHPEVSIRL--MHQGRQLLYTNGSGDVRQVLAAIYGMAVAKKMIPINVQSLDY 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E++GY++ P + + + + IN R+V N G LK
Sbjct: 231 EVNGYVALPEITRASRNYMSTIINGRFV-----------------------KNYGLLKAV 267
Query: 300 RSKSQAC------PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ P L + L D+ P K V + IE+ +++A+ K
Sbjct: 268 QQGYHTLLPIGRFPIVFLTITMDPLLVDVNVHPAKLEVRLSKEAELFELIEQGVKAAFKK 327
Query: 354 -KIAHDSFDVDMLEDAELPLESSRFQ-SHQSST 384
++ D+ + A P E F HQS T
Sbjct: 328 QQLIPDAVVPTKSKSAVQPTEQQTFTFDHQSKT 360
>gi|329115863|ref|ZP_08244580.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus parauberis NCFD 2020]
gi|326906268|gb|EGE53182.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus parauberis NCFD 2020]
Length = 658
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 43/391 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + + + D+
Sbjct: 1 MQKIVELPEVLANQIAAGEVIERPASVVKELVENAIDAKSSQITIEIEESGLKSITITDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G+S++ L L RHA TSK+ + +D+ I T GFRGEAL SI+ +SLL I +
Sbjct: 61 GDGMSKEDLPLSLLRHA-TSKIKNQSDL---FRIRTLGFRGEALPSIASISLLTIKSATA 116
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G + + KG + I+ VGT + +LF+N P R KYM+S ++ H V
Sbjct: 117 EADYGNQLISKGGEV--ESIEPVSTPVGTKIKVENLFFNTPARLKYMKSLQAELAHIV-D 173
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 238
V R++L HP+V+F I + L S ++ L I+ +GI + E++ D
Sbjct: 174 VVNRLSLAHPEVAFTLI---CDGRELTKTSGTADLKQAIAGIYGINTAKKMVEISTADLD 230
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
E+SG++S P + + + + + IN RY+ ++ N L G
Sbjct: 231 FEVSGFVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDG 271
Query: 299 KRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-RSAWMKKI 355
SK P +++++ L D+ P K V +++ I AI S ++ +
Sbjct: 272 YGSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISSAISESLRLQDL 331
Query: 356 AHDSFD---------VDMLEDAELPLESSRF 377
D+ + + E LPL++++
Sbjct: 332 IPDALENLAKSTTRNNNKFEQTSLPLQANKI 362
>gi|449047748|ref|ZP_21730983.1| DNA mismatch repair protein [Klebsiella pneumoniae hvKP1]
gi|448877356|gb|EMB12323.1| DNA mismatch repair protein [Klebsiella pneumoniae hvKP1]
Length = 619
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 172/369 (46%), Gaps = 54/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ D + E L C + A L + IE
Sbjct: 177 RIALARFDVTINLSHNGKVMRQYRAVAQDGQRERRLGTICGA----AFLEHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLRGWVADPLHTTPALAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKI 355
+ S +++
Sbjct: 326 VLSVLQQQL 334
>gi|294500853|ref|YP_003564553.1| DNA mismatch repair protein MutL [Bacillus megaterium QM B1551]
gi|294350790|gb|ADE71119.1| DNA mismatch repair protein MutL [Bacillus megaterium QM B1551]
Length = 625
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 177/381 (46%), Gaps = 48/381 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV N++DA +T + + + ++++D+
Sbjct: 1 MGKIVQLSDELSNKIAAGEVVERPASVVKELVENAIDANSTVIEIELEEAGLSKIRILDN 60
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G GI+ + + +RHA TSK+ D+ I T GFRGEAL SI+ VS+LE+ T
Sbjct: 61 GDGIASEDCLTAFKRHA-TSKIKTEQDL---FRIRTLGFRGEALPSIASVSMLELKTST- 115
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 179
G G ++G + ++ + RK GT +V +LF+N P R KYM++ + L +V
Sbjct: 116 GEEAGTHLKLRGGEIVHHELTSSRK--GTELVIENLFFNTPARLKYMKTVNTE-LGNVTD 172
Query: 180 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 239
V R+A+ HP+VS + M +LL T S +L + +G+ + +N
Sbjct: 173 VVNRLAMSHPEVSIRL--MHQGRQLLYTNGSGDVRQVLAAIYGMAVARKMIPINVQSLDY 230
Query: 240 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 299
E+SGY++ P + + + + IN R+V N G LK
Sbjct: 231 EVSGYVALPEITRASRNYMSTIINGRFV-----------------------KNYGLLKAV 267
Query: 300 RSKSQAC------PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 353
+ P L + L D+ P K V + IE+ +++A+ K
Sbjct: 268 QQGYHTLLPIGRFPIVFLTITMDPLLVDVNVHPAKLEVRLSKEAELFELIEQGVKAAFKK 327
Query: 354 KIAHDSFDVDMLEDAELPLES 374
+ ++ DA +P +S
Sbjct: 328 Q--------QLIPDAVVPTKS 340
>gi|453065059|gb|EMF06023.1| DNA mismatch repair protein [Serratia marcescens VGH107]
Length = 627
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 171/350 (48%), Gaps = 33/350 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ + +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARHA-TSKI---STLDDLEAIVSLGFRGEALASISSVSRLTLTSRTADQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VG+T+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEGREQ-AVTVKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLD---EVNANDGA 238
RIAL V+ I++ +L+ ++ + G I +FL ++ G
Sbjct: 177 RIALARFDVA---INLSHNGKLIRQYRAAKEESQHERRLGSICGPAFLQHALNIDWQHGD 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
L I G+++ P + + QY Y+NSR + +L+NH A D K +
Sbjct: 234 LNIRGWVADPDGARQLGEMQYCYVNSRMMRD----RLINH-AIRQAYQDQLKDDQQ---- 284
Query: 299 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 285 --------PAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|291550403|emb|CBL26665.1| DNA mismatch repair protein MutL [Ruminococcus torques L2-14]
Length = 708
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 154/277 (55%), Gaps = 14/277 (5%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I+ L + + + +G V+ +V+ELV N++DAG+T V + + G+ ++++
Sbjct: 1 MPHIHVLDQITIDKIAAGEVIERPASIVKELVENAIDAGSTSVKIEIKDGGIS--FIRIT 58
Query: 58 DDGSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 117
D+G GI +D + RH+ TSK+ + D+ + I + GFRGEAL+SI+ V+ E+ITK
Sbjct: 59 DNGCGIPQDEVQRAFLRHS-TSKIETVEDL---SHIASLGFRGEALSSIAAVTRTELITK 114
Query: 118 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G R V++G K + L +D GTT + LFYN P RRK++++ + H V
Sbjct: 115 TADAEFGTRYVIEGGKEVSL--EDTGAPNGTTFLVHQLFYNVPARRKFLKTPMTEAGH-V 171
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ ++ +AL HP+V+F+F++ + E L T + ++ + +G + + L E++
Sbjct: 172 QDLLMHLALSHPEVAFQFLN--NGQEKLRTSGNGKLKDVIYNVYGRDVAANLIEIDYEKN 229
Query: 238 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHK 274
+ I+G++ P + + F+ ++N RYV I K
Sbjct: 230 GIHITGFLGKPIITRGNRNFENFFVNGRYVKSAMISK 266
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 122/306 (39%), Gaps = 32/306 (10%)
Query: 1077 SSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSII--SGTKWRNGHPQ------TTNNN 1128
S+ + D +E +A+ K + H +A ++ + + P TT+ +
Sbjct: 424 SAEVADRKEIFRADEQKDKIAEHVKYAVEAADKTVAPETAATVQKSKPAIEMQTATTSTD 483
Query: 1129 ISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAV 1188
+ D D + +G + F + + + + K++ QV + V L +
Sbjct: 484 AASDCEITDAKSEPENGT---QMDLFEENFLKRDIRAEYKLIGQVFDTYWLVEFKDNLYI 540
Query: 1189 IDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWIC 1248
IDQHAA ER+ E ++ S E S YL L L QLL ++ G+
Sbjct: 541 IDQHAAHERVLYERTLREMKSREFTS-QYLSPPIILSLSMQEAQLLNENMDRFSRIGF-- 597
Query: 1249 NIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTP 1307
I G + + AVP +F + ++ L+E + L + +S TP
Sbjct: 598 EIEPFGGEEY--------------AVRAVPDNLFSIAKKEL-LMEMIDDLTEGLSTSMTP 642
Query: 1308 PSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV--NLEA 1365
+ + S +C+ A+ + L E ++ EL + C HGRPT + + +LE
Sbjct: 643 ELIDEKVASLSCKAAVKGNNRLSAQEVDKLIGELLTLDNPYHCPHGRPTIIAMTKRDLEK 702
Query: 1366 LHKQIA 1371
K+I
Sbjct: 703 KFKRIV 708
>gi|409387683|ref|ZP_11239863.1| DNA mismatch repair protein MutL [Lactococcus raffinolactis 4877]
gi|399205240|emb|CCK20778.1| DNA mismatch repair protein MutL [Lactococcus raffinolactis 4877]
Length = 643
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 170/353 (48%), Gaps = 33/353 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSG 62
I L + + N + +G V+ VV+EL+ N++DA +T++ V + ++++D+G G
Sbjct: 10 IIELDDNLANKIAAGEVIERPASVVKELLENAIDAKSTQITVKIEESGLKSIEIIDNGEG 69
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA--HG 120
I+ D + L +RHA TSK+ D+DD I T GFRGEAL SI+ VS L I T +G
Sbjct: 70 IAHDEVALALKRHA-TSKI---KDVDDLFRIRTLGFRGEALPSIASVSELTINTSVADNG 125
Query: 121 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 180
+G V KG + + +R VGT + +LFYN P R KY++S ++ H +
Sbjct: 126 DESGTLLVAKGGEIIQNSPAPKR--VGTRIKVENLFYNTPARLKYIKSLQAELGH-ITDI 182
Query: 181 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 240
+ R++L HP+V+F I+ E+ T + L +GI + ++A D +
Sbjct: 183 INRLSLAHPEVAFTLIN--DGREMRKTAGTGDLKQALAGVYGISTAKKMIAISAQDLDFD 240
Query: 241 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 300
++GY+S P + + + + V +N RY+ ++ N + G
Sbjct: 241 VTGYVSLPELTRANRNYITVLLNGRYI-------------------KNFLINRAIVDGYG 281
Query: 301 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
SK P +++++ L D+ P K V ++ I +AI A
Sbjct: 282 SKLMVGRFPIAVIDIKIDPFLADVNVHPTKQEVRISKERELMGLISQAISQAL 334
>gi|386388585|ref|ZP_10073444.1| DNA mismatch repair protein [Haemophilus paraphrohaemolyticus
HK411]
gi|385697607|gb|EIG28024.1| DNA mismatch repair protein [Haemophilus paraphrohaemolyticus
HK411]
Length = 642
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 164/354 (46%), Gaps = 33/354 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
IN LP + N + +G V+ VV+ELV NS+DAGAT++ + + +K+ D+G G
Sbjct: 11 INILPPQLANQIAAGEVVERPASVVKELVENSLDAGATQIEIEIEKGGSQLIKIRDNGCG 70
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I++ LVL RHA TSK+ L D++ I + GFRGEALASIS VS L + ++ G+
Sbjct: 71 IAKQDLVLALARHA-TSKISSLEDLE---AILSLGFRGEALASISSVSRLLLTSRPEGQA 126
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + I VGTT+ +LF+N P RRK++++ + H + + V
Sbjct: 127 EAWQAYAQGRE-MVVDIQPASHPVGTTIEVNNLFFNTPARRKFLRTDKTEFQH-IDEVVR 184
Query: 183 RIALVHPKVSF------KFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 236
RIAL P VSF K + + +A + I+ ++LD
Sbjct: 185 RIALAKPHVSFTLSHNDKIVRQYRKTVDNSIEQKQKRVAAICGEQFIQHANYLD---WQH 241
Query: 237 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 296
G L + G+I SP Y Y+N R + K +NH
Sbjct: 242 GDLHLHGWIGSPELDRPQNDLCYSYVNGRMMRD----KTINHAIRQ-------------A 284
Query: 297 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 350
G+ PA++L L + D+ P K V F V FI + + A
Sbjct: 285 YGEHIAQGDYPAFVLFLDLDPTHVDVNVHPAKHEVRFHQGRLVHDFILQGVLQA 338
>gi|432444144|ref|ZP_19686458.1| DNA mismatch repair protein mutL [Escherichia coli KTE191]
gi|433026127|ref|ZP_20214084.1| DNA mismatch repair protein mutL [Escherichia coli KTE106]
gi|433326149|ref|ZP_20403063.1| DNA mismatch repair protein [Escherichia coli J96]
gi|430977433|gb|ELC94270.1| DNA mismatch repair protein mutL [Escherichia coli KTE191]
gi|431528102|gb|ELI04811.1| DNA mismatch repair protein mutL [Escherichia coli KTE106]
gi|432345623|gb|ELL40123.1| DNA mismatch repair protein [Escherichia coli J96]
Length = 615
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 179/359 (49%), Gaps = 34/359 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + + VGTT+ DLFYN P RRK++++ K + + + +
Sbjct: 119 EAWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTE-KTEFNHIDEIIR 176
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDEVNAND---GA 238
RIAL V+ I++ +++ + S G I +FL++ A + G
Sbjct: 177 RIALARFDVT---INLSHNGKIVRQYRAVSEGGQKERRLGAICGTAFLEQALAIEWQHGD 233
Query: 239 LEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 297
L + G+++ P + + ++ QY Y+N R + +L+NH A C D +A+
Sbjct: 234 LTLRGWVADPNHTTPALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLRADQQ--- 285
Query: 298 GKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 355
PA++L L PH + D+ P K V F V FI + + S +++
Sbjct: 286 ---------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL 334
>gi|22538232|ref|NP_689083.1| DNA mismatch repair protein [Streptococcus agalactiae 2603V/R]
gi|77414024|ref|ZP_00790195.1| DNA mismatch repair protein HexB [Streptococcus agalactiae 515]
gi|22535144|gb|AAN00956.1|AE014286_19 DNA mismatch repair protein HexB [Streptococcus agalactiae 2603V/R]
gi|77159906|gb|EAO71046.1| DNA mismatch repair protein HexB [Streptococcus agalactiae 515]
Length = 659
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 169/355 (47%), Gaps = 41/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
+ I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 3 LSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 62
Query: 60 GSGISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 119
G G++ + VL RHA TSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 63 GEGMTSEDAVLSLRRHA-TSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATE 118
Query: 120 GRPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVL 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++
Sbjct: 119 QGKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELA 171
Query: 175 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 234
H + V R++L HP+V+F I+ E+ T + + +G+ + E++
Sbjct: 172 HII-DIVNRLSLAHPEVAFTLIN--DGKEMTKTSGTGDLRQAIAGIYGLNTAKKMIEISN 228
Query: 235 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 229 ADLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRS 269
Query: 295 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 270 ILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISTAI 324
>gi|374386353|ref|ZP_09643853.1| DNA mismatch repair protein MutL [Odoribacter laneus YIT 12061]
gi|373224282|gb|EHP46622.1| DNA mismatch repair protein MutL [Odoribacter laneus YIT 12061]
Length = 617
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 173/367 (47%), Gaps = 28/367 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ VV+EL+ N++DAGA + V + V +++V+D+G G
Sbjct: 5 IQLLPDSVANQIAAGEVVQRPASVVKELMENAIDAGADHIQVVLKNVGKAFIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
+S + ERH ATSK +A D I T GFRGEAL SI+ V+ +E+ T+
Sbjct: 65 MSPLDARMAFERH-ATSK---IASAQDLFNIHTLGFRGEALPSIASVAEIELKTRRSEDE 120
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
G + S+ + +GT + ++LF+N P RRK+++S + L +V L
Sbjct: 121 LGSYVRIAASEL--KSQESVNTPLGTNICVKNLFFNIPARRKFLKSDATE-LRNVINEFL 177
Query: 183 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 242
R+AL +P+V+ I+ +E + S +++ FG S L +N + + I
Sbjct: 178 RLALTYPEVTLSLINNGNE---VYNLPVSGLRQRIVNVFGKSINSRLLNINCDTELISIK 234
Query: 243 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 302
G++ SP + QY ++N+R++ HK + +A +G +
Sbjct: 235 GFVCSPEHAKKTYGEQYFFVNNRFMKHNFFHKAV------------MEAYSGLI-----S 277
Query: 303 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 362
+ P+Y L S D+ P KT + F++ + + ++ A K D
Sbjct: 278 ADCIPSYFLYFTVQPSQIDVNIHPTKTEIKFQNESDLFQILLAGVKEALGKFNVTPPLDF 337
Query: 363 DMLEDAE 369
D D E
Sbjct: 338 DREGDIE 344
>gi|421727348|ref|ZP_16166511.1| DNA mismatch repair protein [Klebsiella oxytoca M5al]
gi|410371909|gb|EKP26627.1| DNA mismatch repair protein [Klebsiella oxytoca M5al]
Length = 631
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 172/369 (46%), Gaps = 54/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVARLTLTSRTEDQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEIVR 176
Query: 183 RIALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ D + E L C L L + IE
Sbjct: 177 RIALARFDVTINLSHNGKVVRQYRAVSQDGQRERRLGAICG----LPFLEHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L +SG+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLSGWVADPLHTNPTLAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L+ PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLKIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKI 355
+ S +++
Sbjct: 326 VLSILQQQL 334
>gi|385786061|ref|YP_005817170.1| DNA mismatch repair protein [Erwinia sp. Ejp617]
gi|310765333|gb|ADP10283.1| DNA mismatch repair protein [Erwinia sp. Ejp617]
Length = 608
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 176/382 (46%), Gaps = 53/382 (13%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L + RHA TSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IDKDELAMALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTEAQS 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + +
Sbjct: 119 EAWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEIIR 176
Query: 183 RIALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ K + D + E L C + A L +
Sbjct: 177 RIALARFDVAISLSHNGKLVRQYRAVSDDGQRERRLGAICGT----AFLTHAL------- 225
Query: 229 LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 288
++ L + G+++ P S ++ QY Y+N R + +L+NH A D
Sbjct: 226 --KIAWQHSELSLHGWVADPVGSKALSELQYCYVNGRMMRD----RLINH-AIRQAYQDK 278
Query: 289 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 347
G R + PAY+L L PH + D+ P K V F V FI + +
Sbjct: 279 L--------GDRHQ----PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 325
Query: 348 RSAWMKKIAHDSFDVDMLEDAE 369
S + A ++ ++ AE
Sbjct: 326 ISVLQESGAETLPEIATVQPAE 347
>gi|336253507|ref|YP_004596614.1| DNA mismatch repair protein mutL [Halopiger xanaduensis SH-6]
gi|335337496|gb|AEH36735.1| DNA mismatch repair protein mutL [Halopiger xanaduensis SH-6]
Length = 737
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 164/362 (45%), Gaps = 41/362 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I RL E + +G V+ V+ELV NS+DA A +V V V ++V DDG G
Sbjct: 7 IRRLDEDTVARIAAGEVVERPASAVKELVENSLDADANRVDVTVEEGGTELIRVADDGRG 66
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
++ L H TSK+ L D++ +G+ T GFRGEAL +I VS L I + RP
Sbjct: 67 MNEADLRAAVREHT-TSKIEGLEDLE--SGVRTLGFRGEALHTIGSVSRLTICS----RP 119
Query: 123 NGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 177
G G++ +Y G D + GTTV DLFYN P RRK+++++ + H V
Sbjct: 120 RGADGA--GTELVYEGGDVTSVEPVGCPEGTTVEVEDLFYNTPARRKFLKTTATEFAH-V 176
Query: 178 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 237
+ V R AL +P V+ + E+ T A ++S +G E S + V A++
Sbjct: 177 NRVVTRYALANPDVAVSL--THDDREVFATTGQGDLQAAVLSVYGREVASSMIRVEADED 234
Query: 238 AL------EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 291
L +SG +S P + S + + Y+N R V I + + A
Sbjct: 235 ELPPGPVDAVSGLVSHPETNRSSREYLATYVNGRAVTADAIREGI------------MGA 282
Query: 292 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 351
L G R P +L L P D+ P K V F D + V I+ A+ SA
Sbjct: 283 YGTQLGGDR-----YPFVVLFLEVPGDAVDVNVHPRKREVRFDDDDAVRRQIDAAVESAL 337
Query: 352 MK 353
++
Sbjct: 338 LE 339
Score = 49.7 bits (117), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 79/213 (37%), Gaps = 21/213 (9%)
Query: 1149 LTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVL 1208
L G+ D + L +VL Q D ++ LA++DQHAADER+ E LR
Sbjct: 523 LAGDPATGDETDFDSLPPLRVLGQFDDTYLVCETPDGLALVDQHAADERVNYERLRDAF- 581
Query: 1209 SGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQ 1268
+ + L + EL L + + + ++ G+ + + R
Sbjct: 582 -ADDPAAQALASPVELELTAAEAEAFAGYEDALERLGFYAD-------------RVDDRT 627
Query: 1269 ITVITLLAVPCIFGVNLSDVDLLEFLQQLADTD---GSSTTPPSVLRVLNSKACRGAIMF 1325
I V T VP + L +L + L + D G+ T L AC ++
Sbjct: 628 IAVTT---VPAVLEETLEPENLRDVLTSFIEGDREAGAETVDALADEFLGDLACYPSLTG 684
Query: 1326 GDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1358
SL ++ L + C HGRP V
Sbjct: 685 NTSLTEGSVVDLLSRLDDCENPYSCPHGRPVIV 717
>gi|256821741|ref|YP_003145704.1| DNA mismatch repair protein MutL [Kangiella koreensis DSM 16069]
gi|256795280|gb|ACV25936.1| DNA mismatch repair protein MutL [Kangiella koreensis DSM 16069]
Length = 586
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 172/356 (48%), Gaps = 29/356 (8%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
I++L V N + +G V+ VV+EL+ N++DA A ++ + + ++V D+G
Sbjct: 2 AIHKLSPLVANQIAAGEVVERPASVVKELLENAIDAKADRIQIDIERGGTRLIRVTDNGE 61
Query: 62 GISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 121
GISRD L L RHA TSK+ H DD I T GFRGEALASIS V+ L++ ++ +
Sbjct: 62 GISRDELELALARHA-TSKIEH---SDDLKAIYTLGFRGEALASISSVAKLKLSSRPQAQ 117
Query: 122 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 181
G+ + +G + + + + GT V RDLF+N P R+K++++ + +H +++ V
Sbjct: 118 DMGWSAIAEGLD-MQVKLQPQSLPAGTIVEVRDLFFNTPARQKFLRAERTEFVH-IEETV 175
Query: 182 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNANDGA 238
RIAL P V+ + + +S I S I SFL E +++ A
Sbjct: 176 KRIALGSPHVAITLRHNSKVVKRVPAAHNSEQHQQRIGS--ILGASFLREAIKLDSTIDA 233
Query: 239 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 298
+ G++S S QYV++N R V + LNH +A + L
Sbjct: 234 TRLYGWLSPVDWHQSSSLGQYVFVNGRAVRD----RTLNHAIR--------QAYHDRLPA 281
Query: 299 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 354
R PAY+L L S D+ P K V F + V F+ A+ A +++
Sbjct: 282 GR-----MPAYVLYLELEASQVDVNVHPTKHEVRFSNGRQVHDFMSHAVEEALLEQ 332
>gi|425079500|ref|ZP_18482597.1| DNA mismatch repair protein mutL [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|428933273|ref|ZP_19006830.1| DNA mismatch repair protein [Klebsiella pneumoniae JHCK1]
gi|405608012|gb|EKB80964.1| DNA mismatch repair protein mutL [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|426305639|gb|EKV67757.1| DNA mismatch repair protein [Klebsiella pneumoniae JHCK1]
Length = 619
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 172/369 (46%), Gaps = 54/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHAATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 122
I +D L L RHA TSK+ A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHA-TSKI---ASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQ 118
Query: 123 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVR 176
Query: 183 RIALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 228
RIAL V+ D + E L C + A L + IE
Sbjct: 177 RIALARFDVTINLSHNGKVMRQYRAVAQDGQRERRLGTICGA----AFLEHALAIE---- 228
Query: 229 LDEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 -----WQHGDLTLRGWVADPLHTTPALAEIQYCYVNGRMMRD----RLINH-AIRQACED 278
Query: 288 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 346
A+ PA++L L PH + D+ P K V F V FI +
Sbjct: 279 KLGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 347 IRSAWMKKI 355
+ S +++
Sbjct: 326 VLSVLQQQL 334
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,794,171,710
Number of Sequences: 23463169
Number of extensions: 1000179384
Number of successful extensions: 2156091
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1779
Number of HSP's successfully gapped in prelim test: 3664
Number of HSP's that attempted gapping in prelim test: 2125416
Number of HSP's gapped (non-prelim): 12134
length of query: 1403
length of database: 8,064,228,071
effective HSP length: 156
effective length of query: 1247
effective length of database: 8,698,941,003
effective search space: 10847579430741
effective search space used: 10847579430741
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 84 (37.0 bits)