Query 000589
Match_columns 1403
No_of_seqs 870 out of 4818
Neff 7.2
Searched_HMMs 29240
Date Tue Mar 26 16:57:16 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000589.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_361-365//hhsearch_pdb/000589hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a1s_A PINS, partner of inscut 1.0 1 1 195.3 36.4 306 995-1335 45-375 (411)
2 3nf1_A KLC 1, kinesin light ch 1.0 1 1 190.8 32.5 287 988-1279 16-308 (311)
3 3sf4_A G-protein-signaling mod 1.0 1 1 190.5 36.8 262 998-1277 47-335 (406)
4 3edt_B KLC 2, kinesin light ch 1.0 1 1 185.0 24.6 262 1007-1277 10-280 (283)
5 4g1t_A Interferon-induced prot 1.0 1 1 183.4 27.7 312 998-1335 51-462 (472)
6 3ro2_A PINS homolog, G-protein 1.0 1 1 182.6 36.6 305 997-1336 4-336 (338)
7 3sf4_A G-protein-signaling mod 1.0 1 1 180.8 37.1 307 996-1337 7-341 (406)
8 1w3b_A UDP-N-acetylglucosamine 1.0 1 1 178.7 25.5 264 998-1332 101-368 (388)
9 3nf1_A KLC 1, kinesin light ch 1.0 1 1 177.9 27.3 277 1031-1335 18-310 (311)
10 1w3b_A UDP-N-acetylglucosamine 1.0 1 1 177.2 25.5 265 997-1332 66-334 (388)
No 1
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=195.33 Aligned_cols=306 Identities=16% Similarity=0.127 Sum_probs=253.4
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 2589999999999999099799999999999999984099998-899999999999992299999999999999999994
Q 000589 995 CSEAKNLVEMGKVQLAEGLLSEAYTLFSEAFSILQQVTGPMHR-EVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERC 1073 (1403)
Q Consensus 995 ~~~A~~l~~lG~~~~~~G~~eeA~~~l~eAL~l~~qi~g~~~p-~~a~al~~LA~iy~~~G~~eeAi~~~~kAL~i~er~ 1073 (1403)
...+..++.+|..++..|++++|+.+|++++.+ .+.++ ..+.++..+|.+|..+|++++|+.++++++.+.+..
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 119 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQA-----GTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM 119 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
T ss_conf 689999999999998827599999999999874-----645846899999999999998789999999999999999871
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC--------------
Q ss_conf 199995699999999999998799999999999999999750699998799999999999999499--------------
Q 000589 1074 LGLDHPDTAHSYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGK-------------- 1139 (1403)
Q Consensus 1074 lg~d~p~~a~a~~nLA~~~~~~g~~~eAl~~l~kAL~l~~~~~g~d~p~~a~~~~nLA~il~~~g~-------------- 1139 (1403)
.+++....++.++|.+|...|++++|+.++++++.+.... .+++..+.++.++|.+|...|+
T Consensus 120 --~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a 195 (411)
T 4a1s_A 120 --NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL--GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDV 195 (411)
T ss_dssp --TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHH
T ss_pred --CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf --5736799999999999998789999999999999999871--044889999999999999837611133310011210
Q ss_pred ---HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf ---99999999999999999709796889999999999999939979999999999999999719999899999999999
Q 000589 1140 ---MDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTKDSQNWMKT 1216 (1403)
Q Consensus 1140 ---~eeAl~~lekAL~l~~~~~G~~~~~~a~~~~~LA~iy~~~Gd~~eAi~~lkkAl~i~~~~lG~~~~~~~~a~~~La~ 1216 (1403)
+++|+.++++++.+.... .+.+..+.++..+|.+|...|++++|+.++++++.+.... .+......++..++.
T Consensus 196 ~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~ 271 (411)
T 4a1s_A 196 KEALTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREF--GDRAAERRANSNLGN 271 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHH
T ss_conf 699999999999999999973--8879999999999999998588299999999999999851--996789999999999
Q ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC---HHHHHHHHHHH----HHCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 997889999931699999999899999998519---67999999999----92990999999999999865299983441
Q 000589 1217 FKMRELQMNVQKQKGQAFNAASTQKAIDILKAH---PDLIHAFQAVA----AAGGSGNSGASANNSLNAALLGETLPRGR 1289 (1403)
Q Consensus 1217 l~~r~~~~~~qg~~~eAi~~l~~qkALei~~~~---p~~~~a~~~La----~~G~~~eA~~~~ekAL~~~~~G~~hp~~~ 1289 (1403)
++ ..+|++++|+..+. +++.+.... .....++..+| .+|++++|..++++++.........+...
T Consensus 272 ~~------~~~g~~~~A~~~~~--~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 343 (411)
T 4a1s_A 272 SH------IFLGQFEDAAEHYK--RTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEA 343 (411)
T ss_dssp HH------HTTTCHHHHHHHHH--HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HH------HHCCCHHHHHHHHH--HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 99------98768999999999--99999987698799999999999999981889999999999999999879858899
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
Q ss_conf 5299999999999999999437773089911013999999997821
Q 000589 1290 GFDERAARAAAEVRKKAVAKGLLIRPHGLPAQALPPLTQLLNIINS 1335 (1403)
Q Consensus 1290 ~~~era~~a~~e~r~l~~a~G~~~~~~g~~~eA~~~l~qaL~l~~s 1335 (1403)
......|..+...|++++|...+++++.+...
T Consensus 344 --------------~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 375 (411)
T 4a1s_A 344 --------------RACWSLGNAHSAIGGHERALKYAEQHLQLAXX 375 (411)
T ss_dssp --------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCH
T ss_pred --------------HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf --------------99999999999805699999999999999851
No 2
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=190.76 Aligned_cols=287 Identities=22% Similarity=0.231 Sum_probs=240.8
Q ss_pred HHHCCC-CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 320487-5258999999999999909979999999999999998409999889999999999999229999999999999
Q 000589 988 VKHSVP-ICSEAKNLVEMGKVQLAEGLLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKE 1066 (1403)
Q Consensus 988 vK~~~~-~~~~A~~l~~lG~~~~~~G~~eeA~~~l~eAL~l~~qi~g~~~p~~a~al~~LA~iy~~~G~~eeAi~~~~kA 1066 (1403)
.+..++ ....+..+..+|..+...|++++|+.++.+++.+.....+++++..+.++..+|.+|...|++++|+.+++++
T Consensus 16 ~q~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 95 (311)
T 3nf1_A 16 FQGGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDA 95 (311)
T ss_dssp CSSSCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 25899740689999999999999858999999999999999998708998899999999999999788999999999999
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 99999941999956999999999999987999999999999999997506999987999999999999994999999999
Q 000589 1067 LIINERCLGLDHPDTAHSYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMDTALRY 1146 (1403)
Q Consensus 1067 L~i~er~lg~d~p~~a~a~~nLA~~~~~~g~~~eAl~~l~kAL~l~~~~~g~d~p~~a~~~~nLA~il~~~g~~eeAl~~ 1146 (1403)
+.+.++..+.+++....++.++|.++...|++++|+.++++++.+.....+.+++....++.++|.++...|++++|+.+
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 175 (311)
T 3nf1_A 96 LAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYY 175 (311)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 99999980889759999999999999981869999999999999999865899818999999999999984897999999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999997097968899999999999999399799999999999999997-19999899999999999997889999
Q 000589 1147 LQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQ-LGEEDSRTKDSQNWMKTFKMRELQMN 1225 (1403)
Q Consensus 1147 lekAL~l~~~~~G~~~~~~a~~~~~LA~iy~~~Gd~~eAi~~lkkAl~i~~~~-lG~~~~~~~~a~~~La~l~~r~~~~~ 1225 (1403)
+++++.+.....+.+++....++..+|.+|..+|++++|+.++++++.+.... ++..++........+..+...+....
T Consensus 176 ~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (311)
T 3nf1_A 176 YQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQK 255 (311)
T ss_dssp HHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999988188978899999999999998489899999999999999985578899321899999999997327555
Q ss_pred HHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH----HHCCHHHHHHHHHHHHHHH
Q ss_conf 93169999999989999999851967999999999----9299099999999999986
Q 000589 1226 VQKQKGQAFNAASTQKAIDILKAHPDLIHAFQAVA----AAGGSGNSGASANNSLNAA 1279 (1403)
Q Consensus 1226 ~qg~~~eAi~~l~~qkALei~~~~p~~~~a~~~La----~~G~~~eA~~~~ekAL~~~ 1279 (1403)
..+.+.+|...+. .....+|....++..+| .+|++++|..+++++++..
T Consensus 256 ~~~~~~~a~~~~~-----~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 256 DGTSFGEYGGWYK-----ACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp --CCSCCCC--------------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----HCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 6888888888775-----0377980399999999999998779999999999999986
No 3
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=190.49 Aligned_cols=262 Identities=16% Similarity=0.149 Sum_probs=164.7
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999990997999999999999999840999988999999999999922999999999999999999941999
Q 000589 998 AKNLVEMGKVQLAEGLLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLD 1077 (1403)
Q Consensus 998 A~~l~~lG~~~~~~G~~eeA~~~l~eAL~l~~qi~g~~~p~~a~al~~LA~iy~~~G~~eeAi~~~~kAL~i~er~lg~d 1077 (1403)
+..+..+|.++...|++++|+.++.+++.+.... .+.+..+.++..+|.+|..+|++++|+.++++++.+.... .+
T Consensus 47 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~ 122 (406)
T 3sf4_A 47 SAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--ND 122 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TC
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CC
T ss_conf 9999999999998068999999999999999862--6667899999999999988479999999999999999865--32
Q ss_pred CHHHHHHHHHHHHHHHHCCC--------------------HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 95699999999999998799--------------------9999999999999997506999987999999999999994
Q 000589 1078 HPDTAHSYGNMALFYHGLNQ--------------------TELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDI 1137 (1403)
Q Consensus 1078 ~p~~a~a~~nLA~~~~~~g~--------------------~~eAl~~l~kAL~l~~~~~g~d~p~~a~~~~nLA~il~~~ 1137 (1403)
.+....++.++|.++...|+ +++|+.++.+++.+.... .+.+..+.++.++|.++...
T Consensus 123 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~ 200 (406)
T 3sf4_A 123 KVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTAL--GDRAAQGRAFGNLGNTHYLL 200 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHC
T ss_conf 1006899999999999739744444310000104667899999999999999999855--67477899999999999983
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 99999999999999999997097968899999999999999399799999999999999997199998999999999999
Q 000589 1138 GKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTKDSQNWMKTF 1217 (1403)
Q Consensus 1138 g~~eeAl~~lekAL~l~~~~~G~~~~~~a~~~~~LA~iy~~~Gd~~eAi~~lkkAl~i~~~~lG~~~~~~~~a~~~La~l 1217 (1403)
|++++|+.++++++.+.... .+....+.++.++|.+|...|++++|+.++++++.+.... .++.....++..++.+
T Consensus 201 g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~ 276 (406)
T 3sf4_A 201 GNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNT 276 (406)
T ss_dssp TBHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHH
T ss_conf 68999999999999999862--7858999999999999988499699999999999998857--6764899999999999
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH---CHHHHHHHHHHH----HHCCHHHHHHHHHHHHH
Q ss_conf 9788999993169999999989999999851---967999999999----92990999999999999
Q 000589 1218 KMRELQMNVQKQKGQAFNAASTQKAIDILKA---HPDLIHAFQAVA----AAGGSGNSGASANNSLN 1277 (1403)
Q Consensus 1218 ~~r~~~~~~qg~~~eAi~~l~~qkALei~~~---~p~~~~a~~~La----~~G~~~eA~~~~ekAL~ 1277 (1403)
+ ..+|++++|+..+. +++.+... .+....++..+| ..|++++|..+++++++
T Consensus 277 ~------~~~g~~~~A~~~~~--~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 335 (406)
T 3sf4_A 277 Y------TLLQDYEKAIDYHL--KHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 335 (406)
T ss_dssp H------HHTTCHHHHHHHHH--HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred H------HHHCCHHHHHHHHH--HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 9------98376999999999--99999985578578999999999999986999999999999999
No 4
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=1.00 E-value=1 Score=184.95 Aligned_cols=262 Identities=20% Similarity=0.221 Sum_probs=216.5
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 99990997999999999999999840999988999999999999922999999999999999999941999956999999
Q 000589 1007 VQLAEGLLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLDHPDTAHSYG 1086 (1403)
Q Consensus 1007 ~~~~~G~~eeA~~~l~eAL~l~~qi~g~~~p~~a~al~~LA~iy~~~G~~eeAi~~~~kAL~i~er~lg~d~p~~a~a~~ 1086 (1403)
.....|++++|+.++++|+.++.+..+.+++..+.++..+|.+|..+|++++|+.++++++.+.++..+.+++....++.
T Consensus 10 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 89 (283)
T 3edt_B 10 HSSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLN 89 (283)
T ss_dssp ---CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 24788977899999999999999863999878999999999999986669999999999999999873876669999998
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 99999998799999999999999999750699998799999999999999499999999999999999997097968899
Q 000589 1087 NMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNERLLGEEHIQTA 1166 (1403)
Q Consensus 1087 nLA~~~~~~g~~~eAl~~l~kAL~l~~~~~g~d~p~~a~~~~nLA~il~~~g~~eeAl~~lekAL~l~~~~~G~~~~~~a 1166 (1403)
++|.++...|++++|+.++++++.+.....++++|....++.++|.++...|++++|+.++++++.+.....+++++...
T Consensus 90 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 169 (283)
T 3edt_B 90 NLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVA 169 (283)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 89999998104999999999999999987199986999999999999998577999999999999999986499987999
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 999999999999399799999999999999997-1999989999999999999788999993169999999989999999
Q 000589 1167 VCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQ-LGEEDSRTKDSQNWMKTFKMRELQMNVQKQKGQAFNAASTQKAIDI 1245 (1403)
Q Consensus 1167 ~~~~~LA~iy~~~Gd~~eAi~~lkkAl~i~~~~-lG~~~~~~~~a~~~La~l~~r~~~~~~qg~~~eAi~~l~~qkALei 1245 (1403)
.++..+|.+|..+|++++|+.++++++.+.... .+..++.....+..++.++ ...+....+... . .+...
T Consensus 170 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~--~~~~~ 240 (283)
T 3edt_B 170 KTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEERE------ESKDKRRDSAPY-G--EYGSW 240 (283)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHH------HTTCCCCC-------------
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH------HCCCCHHHHHHH-H--HHHHH
T ss_conf 99999999999849978899999999999887538885436888999999998------649963689889-9--89999
Q ss_pred H----HHCHHHHHHHHHHH----HHCCHHHHHHHHHHHHH
Q ss_conf 8----51967999999999----92990999999999999
Q 000589 1246 L----KAHPDLIHAFQAVA----AAGGSGNSGASANNSLN 1277 (1403)
Q Consensus 1246 ~----~~~p~~~~a~~~La----~~G~~~eA~~~~ekAL~ 1277 (1403)
. ..+|....++..+| .+|++++|..+++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 280 (283)
T 3edt_B 241 YKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASR 280 (283)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 9856878789999999999999986889999999999987
No 5
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=183.38 Aligned_cols=312 Identities=12% Similarity=-0.012 Sum_probs=150.2
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9999999999999099799999999999999984099-998899999999999992299999999999999999994199
Q 000589 998 AKNLVEMGKVQLAEGLLSEAYTLFSEAFSILQQVTGP-MHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGL 1076 (1403)
Q Consensus 998 A~~l~~lG~~~~~~G~~eeA~~~l~eAL~l~~qi~g~-~~p~~a~al~~LA~iy~~~G~~eeAi~~~~kAL~i~er~lg~ 1076 (1403)
+..+..+|.++..+|++++|+.+|++|+++.+...+. .++..+.+|.++|.+|..+|++++|+.++++++.+.+...+.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~ 130 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSP 130 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999987999999999999999877507541366899999999999998598278999999999984860554
Q ss_pred CCHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHCCCCCHH--------------------------------
Q ss_conf 995699999999999998--7999999999999999997506999987--------------------------------
Q 000589 1077 DHPDTAHSYGNMALFYHG--LNQTELALRHMSRALLLLSLSSGPDHPD-------------------------------- 1122 (1403)
Q Consensus 1077 d~p~~a~a~~nLA~~~~~--~g~~~eAl~~l~kAL~l~~~~~g~d~p~-------------------------------- 1122 (1403)
.++....++.++|..+.. .++|++|+.+|++++.+. ++++.
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~-----p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~ 205 (472)
T 4g1t_A 131 YRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKK-----PKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLN 205 (472)
T ss_dssp SCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS-----TTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
T ss_conf 55324999999999999972322999999999998729-----8999999999999998647068999999999986549
Q ss_pred --HHHHHHHHHHHHH----HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf --9999999999999----9499999999999999999997097968899999999999999399799999999999999
Q 000589 1123 --VAATFINVAMMYQ----DIGKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDIL 1196 (1403)
Q Consensus 1123 --~a~~~~nLA~il~----~~g~~eeAl~~lekAL~l~~~~~G~~~~~~a~~~~~LA~iy~~~Gd~~eAi~~lkkAl~i~ 1196 (1403)
...++.++|..+. ..+++++|+.++++++.+. +....++.++|.+|...|++++|+.++++++.+.
T Consensus 206 p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~--------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 277 (472)
T 4g1t_A 206 PDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKA--------PGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYI 277 (472)
T ss_dssp SSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHC--------SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf 84169999998899998764137999999999998849--------6489999999999987486378999999999869
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHH-----------------------------------------------HHHHHHHHHC
Q ss_conf 99719999899999999999997-----------------------------------------------8899999316
Q 000589 1197 VKQLGEEDSRTKDSQNWMKTFKM-----------------------------------------------RELQMNVQKQ 1229 (1403)
Q Consensus 1197 ~~~lG~~~~~~~~a~~~La~l~~-----------------------------------------------r~~~~~~qg~ 1229 (1403)
++ ...++..++.+|. .+.....+++
T Consensus 278 -----p~---~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~ 349 (472)
T 4g1t_A 278 -----PN---NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQ 349 (472)
T ss_dssp -----TT---CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTC
T ss_pred -----CC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
T ss_conf -----87---4999999999999998876667788788888877668999999887761487312443568999887402
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-----HHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH--
Q ss_conf 9999999989999999851967999999999-----929909999999999998652999834415299999999999--
Q 000589 1230 KGQAFNAASTQKAIDILKAHPDLIHAFQAVA-----AAGGSGNSGASANNSLNAALLGETLPRGRGFDERAARAAAEV-- 1302 (1403)
Q Consensus 1230 ~~eAi~~l~~qkALei~~~~p~~~~a~~~La-----~~G~~~eA~~~~ekAL~~~~~G~~hp~~~~~~era~~a~~e~-- 1302 (1403)
+++|+..++ +++.+..........+..++ ..|++++|+.+|++++... +...........+.......
T Consensus 350 ~~~A~~~~~--kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~---~~~~~~~~~~~~l~~~~~~~l~ 424 (472)
T 4g1t_A 350 YEEAEYYFQ--KEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKIN---QKSREKEKMKDKLQKIAKMRLS 424 (472)
T ss_dssp HHHHHHHHH--HHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH--HHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999--99843999768999999999999987879999999999998449---4369999989999999999997
Q ss_pred -----HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
Q ss_conf -----999999437773089911013999999997821
Q 000589 1303 -----RKKAVAKGLLIRPHGLPAQALPPLTQLLNIINS 1335 (1403)
Q Consensus 1303 -----r~l~~a~G~~~~~~g~~~eA~~~l~qaL~l~~s 1335 (1403)
.......|.++...|++++|++.|++||++-+.
T Consensus 425 ~~p~~~~~~~~LG~~~~~~g~~~~A~~~y~kALe~~~~ 462 (472)
T 4g1t_A 425 KNGADSEALHVLAFLQELNEKMQQADEDSERGLESGSL 462 (472)
T ss_dssp HCC-CTTHHHHHHHHHHHHHHCC---------------
T ss_pred HCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
T ss_conf 59997999999999999869999999999999826989
No 6
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=1.00 E-value=1 Score=182.64 Aligned_cols=305 Identities=14% Similarity=0.103 Sum_probs=248.8
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 8999999999999909979999999999999998409999-889999999999999229999999999999999999419
Q 000589 997 EAKNLVEMGKVQLAEGLLSEAYTLFSEAFSILQQVTGPMH-REVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLG 1075 (1403)
Q Consensus 997 ~A~~l~~lG~~~~~~G~~eeA~~~l~eAL~l~~qi~g~~~-p~~a~al~~LA~iy~~~G~~eeAi~~~~kAL~i~er~lg 1075 (1403)
.+..++..|..++..|++++|+.++++++.. .+.+ ...+.++..+|.++...|++++|+.++++++.+....
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-- 76 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI-- 76 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC--
T ss_conf 7999999999998711689999999999850-----715188899999999999999488899999999999986366--
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC----------------
Q ss_conf 9995699999999999998799999999999999999750699998799999999999999499----------------
Q 000589 1076 LDHPDTAHSYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGK---------------- 1139 (1403)
Q Consensus 1076 ~d~p~~a~a~~nLA~~~~~~g~~~eAl~~l~kAL~l~~~~~g~d~p~~a~~~~nLA~il~~~g~---------------- 1139 (1403)
.+.+....++..+|.++...|++++|+.++++++.+.... .+.+..+.++.++|.++...|+
T Consensus 77 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (338)
T 3ro2_A 77 GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--NDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPED 154 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 5527899999999999998569999999999999999873--68657899999999999980764111014554210056
Q ss_pred ----HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf ----9999999999999999970979688999999999999993997999999999999999971999989999999999
Q 000589 1140 ----MDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTKDSQNWMK 1215 (1403)
Q Consensus 1140 ----~eeAl~~lekAL~l~~~~~G~~~~~~a~~~~~LA~iy~~~Gd~~eAi~~lkkAl~i~~~~lG~~~~~~~~a~~~La 1215 (1403)
+++|+.++++++.+.... .+.+..+.++..+|.+|...|++++|+.++++++.+.... .+......++..++
T Consensus 155 a~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~ 230 (338)
T 3ro2_A 155 VRNALQAAVDLYEENLSLVTAL--GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLG 230 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
T ss_conf 8999999999999999998746--9789999999789999998178999999999999999855--98599999999999
Q ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC---HHHHHHHHHHH----HHCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9997889999931699999999899999998519---67999999999----9299099999999999986529998344
Q 000589 1216 TFKMRELQMNVQKQKGQAFNAASTQKAIDILKAH---PDLIHAFQAVA----AAGGSGNSGASANNSLNAALLGETLPRG 1288 (1403)
Q Consensus 1216 ~l~~r~~~~~~qg~~~eAi~~l~~qkALei~~~~---p~~~~a~~~La----~~G~~~eA~~~~ekAL~~~~~G~~hp~~ 1288 (1403)
.++ ...|++++|+..+. +++.+.... +....++..+| .+|++++|..++++++.........+..
T Consensus 231 ~~~------~~~g~~~~A~~~~~--~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 302 (338)
T 3ro2_A 231 NAY------IFLGEFETASEYYK--KTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGE 302 (338)
T ss_dssp HHH------HHHTCHHHHHHHHH--HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHH------HHCCCHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 999------98188999999999--9999998503565899999999999998658999999999999998723895799
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 152999999999999999994377730899110139999999978218
Q 000589 1289 RGFDERAARAAAEVRKKAVAKGLLIRPHGLPAQALPPLTQLLNIINSS 1336 (1403)
Q Consensus 1289 ~~~~era~~a~~e~r~l~~a~G~~~~~~g~~~eA~~~l~qaL~l~~s~ 1336 (1403)
. ......|..+...|++++|...+++++.+....
T Consensus 303 ~--------------~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 336 (338)
T 3ro2_A 303 G--------------RACWSLGNAYTALGNHDQAMHFAEKHLEISREV 336 (338)
T ss_dssp H--------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred H--------------HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9--------------999999999998688589999999999998763
No 7
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=180.75 Aligned_cols=307 Identities=15% Similarity=0.110 Sum_probs=254.7
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 589999999999999099799999999999999984099998-8999999999999922999999999999999999941
Q 000589 996 SEAKNLVEMGKVQLAEGLLSEAYTLFSEAFSILQQVTGPMHR-EVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCL 1074 (1403)
Q Consensus 996 ~~A~~l~~lG~~~~~~G~~eeA~~~l~eAL~l~~qi~g~~~p-~~a~al~~LA~iy~~~G~~eeAi~~~~kAL~i~er~l 1074 (1403)
..+..++..|..++..|++++|+.++++++.+ .+.++ ..+.++..+|.+|...|++++|+.++++++.+....
T Consensus 7 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~- 80 (406)
T 3sf4_A 7 ASCLELALEGERLCKSGDCRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI- 80 (406)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC-
T ss_conf 99999998899998703689999999999863-----863599999999999999998068999999999999999862-
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC---------------
Q ss_conf 99995699999999999998799999999999999999750699998799999999999999499---------------
Q 000589 1075 GLDHPDTAHSYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGK--------------- 1139 (1403)
Q Consensus 1075 g~d~p~~a~a~~nLA~~~~~~g~~~eAl~~l~kAL~l~~~~~g~d~p~~a~~~~nLA~il~~~g~--------------- 1139 (1403)
.+.+..+.++.++|.++...|++++|+.++.+++.+.... .+.+..+.++.++|.+|...|+
T Consensus 81 -~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~ 157 (406)
T 3sf4_A 81 -GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPE 157 (406)
T ss_dssp -TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCH
T ss_pred -CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf -6667899999999999988479999999999999999865--3210068999999999997397444443100001046
Q ss_pred -----HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf -----999999999999999997097968899999999999999399799999999999999997199998999999999
Q 000589 1140 -----MDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTKDSQNWM 1214 (1403)
Q Consensus 1140 -----~eeAl~~lekAL~l~~~~~G~~~~~~a~~~~~LA~iy~~~Gd~~eAi~~lkkAl~i~~~~lG~~~~~~~~a~~~L 1214 (1403)
+++|+.++++++.+.... .+.+..+.++.++|.+|...|++++|+.++++++.+.... .+......++.++
T Consensus 158 ~a~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l 233 (406)
T 3sf4_A 158 EVRDALQAAVDFYEENLSLVTAL--GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNL 233 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHH
T ss_conf 67899999999999999999855--6747789999999999998368999999999999999862--7858999999999
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC---HHHHHHHHHHH----HHCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99997889999931699999999899999998519---67999999999----929909999999999998652999834
Q 000589 1215 KTFKMRELQMNVQKQKGQAFNAASTQKAIDILKAH---PDLIHAFQAVA----AAGGSGNSGASANNSLNAALLGETLPR 1287 (1403)
Q Consensus 1215 a~l~~r~~~~~~qg~~~eAi~~l~~qkALei~~~~---p~~~~a~~~La----~~G~~~eA~~~~ekAL~~~~~G~~hp~ 1287 (1403)
+.++ ..+|++++|+..+. +++.+.... +....++..+| ..|++++|..++++++.....-...+.
T Consensus 234 a~~~------~~~g~~~~A~~~~~--~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 305 (406)
T 3sf4_A 234 GNAY------IFLGEFETASEYYK--KTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIG 305 (406)
T ss_dssp HHHH------HHTTCHHHHHHHHH--HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHH------HHCCCHHHHHHHHH--HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 9999------88499699999999--999998857676489999999999999837699999999999999985578578
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 41529999999999999999943777308991101399999999782189
Q 000589 1288 GRGFDERAARAAAEVRKKAVAKGLLIRPHGLPAQALPPLTQLLNIINSSG 1337 (1403)
Q Consensus 1288 ~~~~~era~~a~~e~r~l~~a~G~~~~~~g~~~eA~~~l~qaL~l~~s~g 1337 (1403)
.. ......|..+...|++++|+..+++++.+....+
T Consensus 306 ~~--------------~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 341 (406)
T 3sf4_A 306 EG--------------RACWSLGNAYTALGNHDQAMHFAEKHLEISREVG 341 (406)
T ss_dssp HH--------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred HH--------------HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 99--------------9999999999986999999999999999999822
No 8
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=1.00 E-value=1 Score=178.69 Aligned_cols=264 Identities=16% Similarity=0.226 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999990997999999999999999840999988999999999999922999999999999999999941999
Q 000589 998 AKNLVEMGKVQLAEGLLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLD 1077 (1403)
Q Consensus 998 A~~l~~lG~~~~~~G~~eeA~~~l~eAL~l~~qi~g~~~p~~a~al~~LA~iy~~~G~~eeAi~~~~kAL~i~er~lg~d 1077 (1403)
...+..+|.++...|++++|+..|.+++.. +|....++..+|.++..+|++++|+.++++++..
T Consensus 101 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-------- 164 (388)
T 1w3b_A 101 IDGYINLAAALVAAGDMEGAVQAYVSALQY--------NPDLYCVRSDLGNLLKALGRLEEAKACYLKAIET-------- 164 (388)
T ss_dssp HHHHHHHHHHHHHHSCSSHHHHHHHHHHHH--------CTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--------
T ss_conf 999999999999858999999999999975--------9896899999999999846899999999999872--------
Q ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 95699999999999998799999999999999999750699998799999999999999499999999999999999997
Q 000589 1078 HPDTAHSYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNERL 1157 (1403)
Q Consensus 1078 ~p~~a~a~~nLA~~~~~~g~~~eAl~~l~kAL~l~~~~~g~d~p~~a~~~~nLA~il~~~g~~eeAl~~lekAL~l~~~~ 1157 (1403)
.|....++.++|.++...|++++|+.+|++++.+ +|....++.++|.++...|++++|+..+++++.+.
T Consensus 165 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--- 233 (388)
T 1w3b_A 165 QPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTL--------DPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS--- 233 (388)
T ss_dssp CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHC---
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC--------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC---
T ss_conf 9897899999999999859999999999999855--------98867999999999998578999999999998529---
Q ss_pred HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 09796889999999999999939979999999999999999719999899999999999997889999931699999999
Q 000589 1158 LGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTKDSQNWMKTFKMRELQMNVQKQKGQAFNAA 1237 (1403)
Q Consensus 1158 ~G~~~~~~a~~~~~LA~iy~~~Gd~~eAi~~lkkAl~i~~~~lG~~~~~~~~a~~~La~l~~r~~~~~~qg~~~eAi~~l 1237 (1403)
|....++.++|.+|...|++++|+.++++++.+ .+++ ..++..++.++ ...|++++|+..+
T Consensus 234 -----p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~------~~~g~~~~A~~~~ 294 (388)
T 1w3b_A 234 -----PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL-----QPHF---PDAYCNLANAL------KEKGSVAEAEDCY 294 (388)
T ss_dssp -----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-----CSSC---HHHHHHHHHHH------HHHSCHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHH------HHCCCHHHHHHHH
T ss_conf -----687899999999999868899999999999864-----9998---89999999999------9869979999999
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHH----HHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999851967999999999----92990999999999999865299983441529999999999999999943777
Q 000589 1238 STQKAIDILKAHPDLIHAFQAVA----AAGGSGNSGASANNSLNAALLGETLPRGRGFDERAARAAAEVRKKAVAKGLLI 1313 (1403)
Q Consensus 1238 ~~qkALei~~~~p~~~~a~~~La----~~G~~~eA~~~~ekAL~~~~~G~~hp~~~~~~era~~a~~e~r~l~~a~G~~~ 1313 (1403)
. +++++.+.++. ++..++ ..|++++|..+++++++. .|.... .....|..+
T Consensus 295 ~--~al~~~p~~~~---~~~~l~~~~~~~g~~~~A~~~~~~al~~------~p~~~~--------------~~~~l~~~~ 349 (388)
T 1w3b_A 295 N--TALRLCPTHAD---SLNNLANIKREQGNIEEAVRLYRKALEV------FPEFAA--------------AHSNLASVL 349 (388)
T ss_dssp H--HHHHHCTTCHH---HHHHHHHHHHTTTCHHHHHHHHHHHTTS------CTTCHH--------------HHHHHHHHH
T ss_pred H--HHHHHCCCCHH---HHHHHHHHHHHCCCHHHHHHHHHHHHHC------CCCCHH--------------HHHHHHHHH
T ss_conf 9--99864944499---9999999999848999999999999860------987399--------------997799999
Q ss_pred HHCCCCHHHHHHHHHHHHH
Q ss_conf 3089911013999999997
Q 000589 1314 RPHGLPAQALPPLTQLLNI 1332 (1403)
Q Consensus 1314 ~~~g~~~eA~~~l~qaL~l 1332 (1403)
...|++++|+..|++++.+
T Consensus 350 ~~~g~~~~A~~~~~~a~~~ 368 (388)
T 1w3b_A 350 QQQGKLQEALMHYKEAIRI 368 (388)
T ss_dssp HTTTCCHHHHHHHHHHHTT
T ss_pred HHCCCHHHHHHHHHHHHHH
T ss_conf 9868889999999999861
No 9
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=177.87 Aligned_cols=277 Identities=21% Similarity=0.206 Sum_probs=227.3
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 40999988999999999999922999999999999999999941999956999999999999987999999999999999
Q 000589 1031 VTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTELALRHMSRALL 1110 (1403)
Q Consensus 1031 i~g~~~p~~a~al~~LA~iy~~~G~~eeAi~~~~kAL~i~er~lg~d~p~~a~a~~nLA~~~~~~g~~~eAl~~l~kAL~ 1110 (1403)
..++++|..+.++..+|.++...|++++|+.++++++.+..+..+.+++....++..+|.++...|++++|+.++++++.
T Consensus 18 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 97 (311)
T 3nf1_A 18 GGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALA 97 (311)
T ss_dssp SSCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 89974068999999999999985899999999999999999870899889999999999999978899999999999999
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99750699998799999999999999499999999999999999997097968899999999999999399799999999
Q 000589 1111 LLSLSSGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEK 1190 (1403)
Q Consensus 1111 l~~~~~g~d~p~~a~~~~nLA~il~~~g~~eeAl~~lekAL~l~~~~~G~~~~~~a~~~~~LA~iy~~~Gd~~eAi~~lk 1190 (1403)
+.....+.+++....++.++|.++...|++++|+.++++++.+.....+.+++....++..+|.+|...|++++|+.+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 177 (311)
T 3nf1_A 98 IREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQ 177 (311)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 99998088975999999999999998186999999999999999986589981899999999999998489799999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH------CHHHHHHHHHHH----
Q ss_conf 9999999971999989999999999999788999993169999999989999999851------967999999999----
Q 000589 1191 KTYDILVKQLGEEDSRTKDSQNWMKTFKMRELQMNVQKQKGQAFNAASTQKAIDILKA------HPDLIHAFQAVA---- 1260 (1403)
Q Consensus 1191 kAl~i~~~~lG~~~~~~~~a~~~La~l~~r~~~~~~qg~~~eAi~~l~~qkALei~~~------~p~~~~a~~~La---- 1260 (1403)
+++.++.+..+.+++....++..++.++ ..+|++++|+..+. +++++... .+.....+..+.
T Consensus 178 ~a~~~~~~~~~~~~~~~~~~~~~la~~~------~~~g~~~~A~~~~~--~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (311)
T 3nf1_A 178 RALEIYQTKLGPDDPNVAKTKNNLASCY------LKQGKFKQAETLYK--EILTRAHEREFGSVDDENKPIWMHAEEREE 249 (311)
T ss_dssp HHHHHHHHTSCTTCHHHHHHHHHHHHHH------HHHTCHHHHHHHHH--HHHHHHHHHHHC------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHH------HHCCCHHHHHHHHH--HHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 9999999881889788999999999999------98489899999999--999999985578899321899999999997
Q ss_pred ------HHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf ------92990999999999999865299983441529999999999999999943777308991101399999999782
Q 000589 1261 ------AAGGSGNSGASANNSLNAALLGETLPRGRGFDERAARAAAEVRKKAVAKGLLIRPHGLPAQALPPLTQLLNIIN 1334 (1403)
Q Consensus 1261 ------~~G~~~eA~~~~ekAL~~~~~G~~hp~~~~~~era~~a~~e~r~l~~a~G~~~~~~g~~~eA~~~l~qaL~l~~ 1334 (1403)
..+.+.+|...+.+++. .++.. .......|.++...|++++|+..|++++++..
T Consensus 250 ~~~~~~~~~~~~~a~~~~~~~~~------~~~~~--------------~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~ 309 (311)
T 3nf1_A 250 CKGKQKDGTSFGEYGGWYKACKV------DSPTV--------------TTTLKNLGALYRRQGKFEAAETLEEAAMRSRK 309 (311)
T ss_dssp C-------CCSCCCC---------------CHHH--------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHHHHHHHHCCC------CCCHH--------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 32755568888888887750377------98039--------------99999999999987799999999999999864
Q ss_pred C
Q ss_conf 1
Q 000589 1335 S 1335 (1403)
Q Consensus 1335 s 1335 (1403)
.
T Consensus 310 ~ 310 (311)
T 3nf1_A 310 Q 310 (311)
T ss_dssp -
T ss_pred C
T ss_conf 6
No 10
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=1.00 E-value=1 Score=177.18 Aligned_cols=265 Identities=18% Similarity=0.221 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 89999999999999099799999999999999984099998899999999999992299999999999999999994199
Q 000589 997 EAKNLVEMGKVQLAEGLLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGL 1076 (1403)
Q Consensus 997 ~A~~l~~lG~~~~~~G~~eeA~~~l~eAL~l~~qi~g~~~p~~a~al~~LA~iy~~~G~~eeAi~~~~kAL~i~er~lg~ 1076 (1403)
.+..++.+|.++...|++++|+.+|++++.+ .|....++..+|.++...|++++|+..+++++..
T Consensus 66 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~------- 130 (388)
T 1w3b_A 66 LAEAYSNLGNVYKERGQLQEAIEHYRHALRL--------KPDFIDGYINLAAALVAAGDMEGAVQAYVSALQY------- 130 (388)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHH-------
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-------
T ss_conf 6699999999998779999999999999874--------9653999999999999858999999999999975-------
Q ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99569999999999999879999999999999999975069999879999999999999949999999999999999999
Q 000589 1077 DHPDTAHSYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMDTALRYLQEALKKNER 1156 (1403)
Q Consensus 1077 d~p~~a~a~~nLA~~~~~~g~~~eAl~~l~kAL~l~~~~~g~d~p~~a~~~~nLA~il~~~g~~eeAl~~lekAL~l~~~ 1156 (1403)
.|.....+.++|.++...|++++|+.+|++++.. +|....++.++|.++...|++++|+.+|++++.+.
T Consensus 131 -~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-- 199 (388)
T 1w3b_A 131 -NPDLYCVRSDLGNLLKALGRLEEAKACYLKAIET--------QPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD-- 199 (388)
T ss_dssp -CTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC--
T ss_pred -CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC--
T ss_conf -9896899999999999846899999999999872--------98978999999999998599999999999998559--
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 70979688999999999999993997999999999999999971999989999999999999788999993169999999
Q 000589 1157 LLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTKDSQNWMKTFKMRELQMNVQKQKGQAFNA 1236 (1403)
Q Consensus 1157 ~~G~~~~~~a~~~~~LA~iy~~~Gd~~eAi~~lkkAl~i~~~~lG~~~~~~~~a~~~La~l~~r~~~~~~qg~~~eAi~~ 1236 (1403)
|.....+..+|.++...|++++|+..+++++.+ .+++ ..++..++.++ ..+|++++|+..
T Consensus 200 ------p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~------~~~g~~~~A~~~ 259 (388)
T 1w3b_A 200 ------PNFLDAYINLGNVLKEARIFDRAVAAYLRALSL-----SPNH---AVVHGNLACVY------YEQGLIDLAIDT 259 (388)
T ss_dssp ------TTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHH-----CTTC---HHHHHHHHHHH------HHTTCHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHH------HHCCCHHHHHHH
T ss_conf ------886799999999999857899999999999852-----9687---89999999999------986889999999
Q ss_pred HHHHHHHHHHHHCHHHHHHHHHHH----HHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 989999999851967999999999----9299099999999999986529998344152999999999999999994377
Q 000589 1237 ASTQKAIDILKAHPDLIHAFQAVA----AAGGSGNSGASANNSLNAALLGETLPRGRGFDERAARAAAEVRKKAVAKGLL 1312 (1403)
Q Consensus 1237 l~~qkALei~~~~p~~~~a~~~La----~~G~~~eA~~~~ekAL~~~~~G~~hp~~~~~~era~~a~~e~r~l~~a~G~~ 1312 (1403)
++ +++++.+..+ .++..++ ..|++++|..+|+++++.. +.++ . .....+..
T Consensus 260 ~~--~al~~~p~~~---~~~~~l~~~~~~~g~~~~A~~~~~~al~~~---p~~~---~--------------~~~~l~~~ 314 (388)
T 1w3b_A 260 YR--RAIELQPHFP---DAYCNLANALKEKGSVAEAEDCYNTALRLC---PTHA---D--------------SLNNLANI 314 (388)
T ss_dssp HH--HHHHTCSSCH---HHHHHHHHHHHHHSCHHHHHHHHHHHHHHC---TTCH---H--------------HHHHHHHH
T ss_pred HH--HHHHHCCCCH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHC---CCCH---H--------------HHHHHHHH
T ss_conf 99--9986499988---999999999998699799999999998649---4449---9--------------99999999
Q ss_pred HHHCCCCHHHHHHHHHHHHH
Q ss_conf 73089911013999999997
Q 000589 1313 IRPHGLPAQALPPLTQLLNI 1332 (1403)
Q Consensus 1313 ~~~~g~~~eA~~~l~qaL~l 1332 (1403)
+...|++++|+..+++++.+
T Consensus 315 ~~~~g~~~~A~~~~~~al~~ 334 (388)
T 1w3b_A 315 KREQGNIEEAVRLYRKALEV 334 (388)
T ss_dssp HHTTTCHHHHHHHHHHHTTS
T ss_pred HHHCCCHHHHHHHHHHHHHC
T ss_conf 99848999999999999860
Done!