BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000593
(1402 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296088648|emb|CBI37639.3| unnamed protein product [Vitis vinifera]
Length = 1230
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 396/866 (45%), Positives = 501/866 (57%), Gaps = 61/866 (7%)
Query: 569 SSPLENLSKEGDHLFREECERITFGEFEKHTPELKEENSKRELVSQPKYSSKLLDCPFAE 628
SSP+E L++E DH + +I F + T E + + +K V Q S + LD ++
Sbjct: 383 SSPMELLTEENDHFSCRKENKIPFQKLRNDTSEFEGQRNKIGFVHQIDSSFQSLDDSPSK 442
Query: 629 CLSPVLRKIDLHGWTSGNRFSLKGSYFLETCFLADGRSSIPVEGDLLNSQRGYEYLQIEP 688
C+S V + H + F + + FLE F S VE +L S G E L ++
Sbjct: 443 CISGVHPHTE-HLELPDDNFFITKNNFLENKFTVLESSFDHVEDKILGSTWGNESLNVDH 501
Query: 689 GVSNGASGTASPLDKDEFSNEFE-VSKDIKKPLRLSCFSQGSPPLGGPLFSGGEERCESS 747
+ NG S A + EF N E SKD KKP+ SC LG L S ES
Sbjct: 502 DMGNGFS--ALSYNSYEFRNGVEEASKDFKKPILQSC------SLGRSLLSD----WESD 549
Query: 748 TGCFKYKRKRKRVCYDKRMDILEADFSNQSFDSFSRTPLQDEASCSQHLPRLSTAGDITA 807
F+ R R +++D N+SFD F T Q+EAS RL T ++
Sbjct: 550 KFEFQIDGLRTR---QRQID------HNKSFDFFPGTAWQEEASSDWPSSRLKTKPEMCT 600
Query: 808 GFDLMSRASLNLFPSHAEPFTKETNFLSDSIEPVGNSVSDYKALNSVWCSKISDPFPQGA 867
G D MSR SL ++ E F E N DS+E G S + +LNS CS +S Q
Sbjct: 601 GLDFMSRDSLKSLSTYRERFAVENNLPPDSVEQSGKFGSGHLSLNSECCSMVSQSLFQTT 660
Query: 868 SWNDGHFIYNNALEGHSILGEGTSCGQLADTEEN-YKFDYD---SKLRRSNQEKCTTARS 923
W+ HF + N +G S D+E + F +D S + N + +
Sbjct: 661 PWDVEHFTHENTPQGGLGSDRNVSYEHFIDSESGGWIFSHDIMPSSSSQENCSSSSCINT 720
Query: 924 GLRFEYYDNSSEDFCKYLQEHDPCNKFSREHSDVPFDKTDWL-----------------C 966
GL + Y S D + L+E++ N F+ HSD+ +TDWL C
Sbjct: 721 GLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYSKSCGKDNNNNRAVPSC 780
Query: 967 SVLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHSAPPFHRHKRRYISLN-CCSVEA 1025
S+ S E ++ + R NC KE SR SHSAPP +R KR++++LN ++E+
Sbjct: 781 SIPLSTNIHKDENKKERLRYQNCGQIHASKERSR-SHSAPPIYRGKRKFLALNDHWTMES 839
Query: 1026 GKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSSEEEDF---RPDFKIESSTILDL 1082
K + H A PE KH QSSG CN KPS E+ R D K D+
Sbjct: 840 KKVDVIDSHDAPTFPETDELKHPLQSSGACNQYFKPSFLEDPLFYGRSDMKKMLENEPDM 899
Query: 1083 EETHKAENFKLSLCPHAHLGAQA-------EGTSII-SGTKWRNGHPQTTNNNISCDIHN 1134
++ + F+ S C + + E T ++ S +KWRN P+ + + S ++
Sbjct: 900 DKIQNIDIFRKSQCLPIDDDSYSFKDFTTKEATDLMNSESKWRNNCPKIASGDKSQKFND 959
Query: 1135 QDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1194
Q N+LDISSG+LHL G+ IP SI K+CL+DAKVLQQVDKKFIPVVA GTLA+IDQHAAD
Sbjct: 960 QYNVLDISSGILHLAGDSLIPQSITKNCLQDAKVLQQVDKKFIPVVADGTLAIIDQHAAD 1019
Query: 1195 ERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGS 1254
ERIRLEELR KVLSGE K++ YLDAEQELVLPEIGYQLL +AEQI++WGWICNIH Q S
Sbjct: 1020 ERIRLEELRQKVLSGEVKTITYLDAEQELVLPEIGYQLLHTYAEQIQNWGWICNIHAQNS 1079
Query: 1255 RSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLN 1314
RSF KNL+LL ++ TVITLLAVPCI GVNLSDVDLLEFLQQLADTDGSST PPSVLRVLN
Sbjct: 1080 RSFTKNLDLLHKKPTVITLLAVPCILGVNLSDVDLLEFLQQLADTDGSSTMPPSVLRVLN 1139
Query: 1315 SKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLNN 1374
KACRGAIMFGD+LLPSEC+LIVEELK+TSLCFQCAHGRPTTVPLVNLEALHKQIA+L +
Sbjct: 1140 LKACRGAIMFGDALLPSECSLIVEELKRTSLCFQCAHGRPTTVPLVNLEALHKQIAKLGS 1199
Query: 1375 ----SSELWHGLHRGEISLKRASRRL 1396
S ELWHGL R E+SL+RA+ RL
Sbjct: 1200 GGGGSIELWHGLRRHELSLERAAHRL 1225
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 263/474 (55%), Positives = 326/474 (68%), Gaps = 38/474 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M +I LPEAV ++VRSG +LFDLTRVVEEL++NS+DAGATKV V V V CY+KVVDDG
Sbjct: 1 MRSIKPLPEAVHSSVRSGIILFDLTRVVEELIYNSLDAGATKVSVSVSVGTCYIKVVDDG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
+G++RDGLVLLGER+ATSKL HL +MD ATG +FGFRGEAL SISDVSLLEI+TK GR
Sbjct: 61 TGVTRDGLVLLGERYATSKLHHLTEMDAATG--SFGFRGEALGSISDVSLLEIVTKTQGR 118
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
PNGYRKVMKG KCLYLGIDD+R+DVGTTVV RDLFYNQPVRRKY+QSSPKKVLHSVKKCV
Sbjct: 119 PNGYRKVMKGCKCLYLGIDDDRQDVGTTVVVRDLFYNQPVRRKYLQSSPKKVLHSVKKCV 178
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
RIALVH VSFK +D+ES+DELLCT SSSSPL+LLIS GIED S L E+N DG L++
Sbjct: 179 FRIALVHSNVSFKVVDIESDDELLCTKSSSSPLSLLISGLGIEDSSSLHELNITDGILKL 238
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SGY+S P ++ S+KAFQYV I+ SF D WKA++G KRS
Sbjct: 239 SGYVSGPCNTFSIKAFQYVCIH----------------VYSF---DPWKASSGSQDKKRS 279
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFD 360
+ Q P Y+LNLRCP S YDLTF+P +T V FKDW P+LAF+E+A+ W + IAH
Sbjct: 280 RCQGYPTYILNLRCPQSHYDLTFEPSRTAVEFKDWVPILAFLEKAVTRFWSEHIAHGESS 339
Query: 361 V---------------DMLEDAELPLESSRFQSHQSSTHLH--SSPLKNLAKQRDHMFHK 403
V +++ E E ++ Q + L SSP++ L ++ DH +
Sbjct: 340 VHANKTSGQELWKEHGNVVSAEEDLSEVAKRQCRIQNCLLGCLSSPMELLTEENDHFSCR 399
Query: 404 ECERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+ +I FQ+ + D E + ++ F Q S LD S ++C+ V P +H
Sbjct: 400 KENKIPFQKLRNDTSEFEGQRNKIGFVHQIDSSFQSLDDSPSKCISGVHPHTEH 453
>gi|359477080|ref|XP_002272829.2| PREDICTED: uncharacterized protein LOC100253902 [Vitis vinifera]
Length = 1218
Score = 607 bits (1565), Expect = e-170, Method: Compositional matrix adjust.
Identities = 396/875 (45%), Positives = 501/875 (57%), Gaps = 70/875 (8%)
Query: 569 SSPLENLSKEGDHLFREECERITFGEFEKHTPELKEENSKRELVSQPKYSSKLLDCPFAE 628
SSP+E L++E DH + +I F + T E + + +K V Q S + LD ++
Sbjct: 362 SSPMELLTEENDHFSCRKENKIPFQKLRNDTSEFEGQRNKIGFVHQIDSSFQSLDDSPSK 421
Query: 629 CLSPVLRKIDLHGWTSGNRFSLKGSYFLETCFLADGRSSIPVEGDLLNSQRGYEYLQIEP 688
C+S V + H + F + + FLE F S VE +L S G E L ++
Sbjct: 422 CISGVHPHTE-HLELPDDNFFITKNNFLENKFTVLESSFDHVEDKILGSTWGNESLNVDH 480
Query: 689 GVSNGASGTASPLDKDEFSNEFE-VSKDIKKPLRLSCFSQGSPPLGGPLFSGGEERCESS 747
+ NG S A + EF N E SKD KKP+ SC LG L S ES
Sbjct: 481 DMGNGFS--ALSYNSYEFRNGVEEASKDFKKPILQSC------SLGRSLLSD----WESD 528
Query: 748 TGCFKYKRKRKRVCYDKRMDILEADFSNQSFDSFSRTPLQDEASCSQHLPRLSTAGDITA 807
F+ R R +++D N+SFD F T Q+EAS RL T ++
Sbjct: 529 KFEFQIDGLRTR---QRQID------HNKSFDFFPGTAWQEEASSDWPSSRLKTKPEMCT 579
Query: 808 GFDLMSRASLNLFPSHAEPFTKETNFLSDSIEPVGNSVSDYKALNSVWCSKISDPFPQGA 867
G D MSR SL ++ E F E N DS+E G S + +LNS CS +S Q
Sbjct: 580 GLDFMSRDSLKSLSTYRERFAVENNLPPDSVEQSGKFGSGHLSLNSECCSMVSQSLFQTT 639
Query: 868 SWNDGHFIYNNALEGHSILGEGTSCGQLADTEEN-YKFDYD---SKLRRSNQEKCTTARS 923
W+ HF + N +G S D+E + F +D S + N + +
Sbjct: 640 PWDVEHFTHENTPQGGLGSDRNVSYEHFIDSESGGWIFSHDIMPSSSSQENCSSSSCINT 699
Query: 924 GLRFEYYDNSSEDFCKYLQEHDPCNKFSREHSDVPFDKTDWL-----------------C 966
GL + Y S D + L+E++ N F+ HSD+ +TDWL C
Sbjct: 700 GLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYSKSCGKDNNNNRAVPSC 759
Query: 967 SVLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHSAPPFHRHKRRYISLN-CCSVEA 1025
S+ S E ++ + R NC KE SR SHSAPP +R KR++++LN ++E+
Sbjct: 760 SIPLSTNIHKDENKKERLRYQNCGQIHASKERSR-SHSAPPIYRGKRKFLALNDHWTMES 818
Query: 1026 GKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSSEEEDF---RPDFKIESSTILDL 1082
K + H A PE KH QSSG CN KPS E+ R D K D+
Sbjct: 819 KKVDVIDSHDAPTFPETDELKHPLQSSGACNQYFKPSFLEDPLFYGRSDMKKMLENEPDM 878
Query: 1083 EETHKAENFKLSLCPHAHLGAQA-------EGTSII-SGTKWRNGHPQTTNNNISCDIHN 1134
++ + F+ S C + + E T ++ S +KWRN P+ + + S ++
Sbjct: 879 DKIQNIDIFRKSQCLPIDDDSYSFKDFTTKEATDLMNSESKWRNNCPKIASGDKSQKFND 938
Query: 1135 QDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1194
Q N+LDISSG+LHL G+ IP SI K+CL+DAKVLQQVDKKFIPVVA GTLA+IDQHAAD
Sbjct: 939 QYNVLDISSGILHLAGDSLIPQSITKNCLQDAKVLQQVDKKFIPVVADGTLAIIDQHAAD 998
Query: 1195 ERIRLEELRHKVLSGEGKSVAYLDAEQELV---------LPEIGYQLLQNFAEQIKDWGW 1245
ERIRLEELR KVLSGE K++ YLDAEQELV LPEIGYQLL +AEQI++WGW
Sbjct: 999 ERIRLEELRQKVLSGEVKTITYLDAEQELVCLCFMLFEVLPEIGYQLLHTYAEQIQNWGW 1058
Query: 1246 ICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTT 1305
ICNIH Q SRSF KNL+LL ++ TVITLLAVPCI GVNLSDVDLLEFLQQLADTDGSST
Sbjct: 1059 ICNIHAQNSRSFTKNLDLLHKKPTVITLLAVPCILGVNLSDVDLLEFLQQLADTDGSSTM 1118
Query: 1306 PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1365
PPSVLRVLN KACRGAIMFGD+LLPSEC+LIVEELK+TSLCFQCAHGRPTTVPLVNLEAL
Sbjct: 1119 PPSVLRVLNLKACRGAIMFGDALLPSECSLIVEELKRTSLCFQCAHGRPTTVPLVNLEAL 1178
Query: 1366 HKQIAQLNN----SSELWHGLHRGEISLKRASRRL 1396
HKQIA+L + S ELWHGL R E+SL+RA+ RL
Sbjct: 1179 HKQIAKLGSGGGGSIELWHGLRRHELSLERAAHRL 1213
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 253/474 (53%), Positives = 311/474 (65%), Gaps = 59/474 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M +I LPEAV ++VRSG +LFDLTRVVEEL++NS+DAGATKV V V V CY+KVVDDG
Sbjct: 1 MRSIKPLPEAVHSSVRSGIILFDLTRVVEELIYNSLDAGATKVSVSVSVGTCYIKVVDDG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
+G++RDGLVLLGER+ATSKL HL +MD ATG +FGFRGEAL SISDVSLLEI+TK GR
Sbjct: 61 TGVTRDGLVLLGERYATSKLHHLTEMDAATG--SFGFRGEALGSISDVSLLEIVTKTQGR 118
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
PNGYRKVMKG KCLYLGIDD+R+DVGTTVV RDLFYNQPVRRKY+QSSPKKVLHSVKKCV
Sbjct: 119 PNGYRKVMKGCKCLYLGIDDDRQDVGTTVVVRDLFYNQPVRRKYLQSSPKKVLHSVKKCV 178
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
RIALVH VSFK +D+ES+DELLCT SSSSPL+LLIS GIED S L E+N DG L++
Sbjct: 179 FRIALVHSNVSFKVVDIESDDELLCTKSSSSPLSLLISGLGIEDSSSLHELNITDGILKL 238
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SGY SF D WKA++G KRS
Sbjct: 239 SGY-------------------------------------SF---DPWKASSGSQDKKRS 258
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFD 360
+ Q P Y+LNLRCP S YDLTF+P +T V FKDW P+LAF+E+A+ W + IAH
Sbjct: 259 RCQGYPTYILNLRCPQSHYDLTFEPSRTAVEFKDWVPILAFLEKAVTRFWSEHIAHGESS 318
Query: 361 V---------------DMLEDAELPLESSRFQSHQSSTHLH--SSPLKNLAKQRDHMFHK 403
V +++ E E ++ Q + L SSP++ L ++ DH +
Sbjct: 319 VHANKTSGQELWKEHGNVVSAEEDLSEVAKRQCRIQNCLLGCLSSPMELLTEENDHFSCR 378
Query: 404 ECERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+ +I FQ+ + D E + ++ F Q S LD S ++C+ V P +H
Sbjct: 379 KENKIPFQKLRNDTSEFEGQRNKIGFVHQIDSSFQSLDDSPSKCISGVHPHTEH 432
>gi|255561427|ref|XP_002521724.1| conserved hypothetical protein [Ricinus communis]
gi|223539115|gb|EEF40711.1| conserved hypothetical protein [Ricinus communis]
Length = 1137
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 349/770 (45%), Positives = 449/770 (58%), Gaps = 53/770 (6%)
Query: 654 YFLETCFLADGRSSIPVEGDLLNSQRGYEYLQIEPGVSNGASGTASPLDKDEFSNEFEVS 713
YFLE + RSS VE +L+ +++ + +S A +D +F +E EV+
Sbjct: 389 YFLED---STQRSSDHVENHILDLDWQNGSIELRSLEMDESSEKAVSMDYHKFDDELEVT 445
Query: 714 KDIKKPLRLSCFSQGSPPLGGPLFSGGEERCESSTGCFKYKRKRKRVCYDKRMDILEADF 773
K +KP SC S+G+ PL G LFS E+ E FK KR+RVC D+ DIL+ D
Sbjct: 446 KMNEKPFLRSCSSRGNLPLDGSLFSS-EDGLEFPVDGFK--TKRRRVCPDENFDILKLDG 502
Query: 774 SNQSFDSFSRTPLQDEASCSQHLPRLSTAGDITAGFDLMSRASLNLFPSHAEPFTKETNF 833
N F+ T Q A+ SQ S A D+ A FD +S AS E +E F
Sbjct: 503 KNYRFNMLPGTS-QQHATSSQKFSAHSLAVDMLADFDSLSGASAKSISFCGELCVEEKGF 561
Query: 834 LSDSIEPVGNSVSDYKALNSVWCSKISDPFPQGASWNDGHFIYNNALEGHSILGEGTSCG 893
S S+ + S S ++LNS WCS S+ + +SW HF+ ++ EG I G+ S G
Sbjct: 562 GSGSLVHMDTSGSSCQSLNSEWCSLTSEALFRASSWGIDHFLDDSGYEGIDIPGKNASHG 621
Query: 894 QLADTE-ENYKFDYDSKLRRSNQEK----CTTARSGLRFEYYDNSSE-DFCKYLQEHDPC 947
+ AD + N + + + SNQ+ CT+A + +Y D SS DF +
Sbjct: 622 RFADNQGRNGSCSHRVRSKCSNQDNLISSCTSAALDFK-DYADTSSALDFDDCAVTNKDI 680
Query: 948 NKF-----------SREHSDVPFDKTDWLCSVLSS---IEYDNPETQRYKFRNHNCEPNP 993
N F S EH ++ +T L S + + E + F+ + E +
Sbjct: 681 NTFFSQRCNAHDVLSLEHPNISLPETGCLPLRFHSRGHKSHHDYELRESHFKFQDQEQDN 740
Query: 994 IHKELSRRSHSAPPFHRHKRRYISLNCCSVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSG 1053
KE SRRS SAPPF++HKRR++SLN S+ + NAH +H S E KHL
Sbjct: 741 FPKERSRRSQSAPPFYKHKRRFVSLNHHSM-IKEGNAHDIHI---STETDVSKHLY---- 792
Query: 1054 VCNANVKPSSEEEDF---RPDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSI 1110
+P+ E+ R D K +++ ++ET + E+ K +
Sbjct: 793 -----FQPNYAEDLMFCIRSDVKNRQESMMGMKETKEGESLKYL----QNTWVDDSPVKD 843
Query: 1111 ISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQ 1170
+S N NNN S I Q +ILDISSG L+ G +P+S++K+CLEDAKVLQ
Sbjct: 844 LSLANDLNSFVLMQNNNTSSKIDYQHDILDISSGFLYFAGNSLVPESLHKNCLEDAKVLQ 903
Query: 1171 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1230
QVD KFIP+VA GTLA+IDQHAADERIRLEELR KVL GE ++V YLD E+EL+LPEIGY
Sbjct: 904 QVDNKFIPIVANGTLAIIDQHAADERIRLEELRQKVLCGEARTVTYLDVEKELILPEIGY 963
Query: 1231 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1290
QLLQN+A QI+DWGWICNI S SF KNLN+L ++ TV+TLLAVPCI VNLSD DLL
Sbjct: 964 QLLQNYAAQIRDWGWICNIQAH-SGSFKKNLNILHQEPTVVTLLAVPCILDVNLSDGDLL 1022
Query: 1291 EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCA 1350
EFLQQLADTDGSST P SVLRVLN KACRGAIMFGDSLL SECALIVEELK+TSLCFQCA
Sbjct: 1023 EFLQQLADTDGSSTMPQSVLRVLNFKACRGAIMFGDSLLRSECALIVEELKKTSLCFQCA 1082
Query: 1351 HGRPTTVPLVNLEALHKQIAQL----NNSSELWHGLHRGEISLKRASRRL 1396
HGRPTTVPLV+L L KQI ++ S ELWHGL R E+S +RA++RL
Sbjct: 1083 HGRPTTVPLVDLVELQKQIVKVGVLDGGSGELWHGLRRQELSFERAAQRL 1132
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 250/457 (54%), Positives = 309/457 (67%), Gaps = 49/457 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
MGTI RLPE+VRN++RSG +LFDLTRVVEELVFNS+DAGA+KV+VYVG CYVKVVDDG
Sbjct: 1 MGTIKRLPESVRNSMRSGIILFDLTRVVEELVFNSLDAGASKVWVYVGAGTCYVKVVDDG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
GISRDGLVLLG+R+ TSKL H ADMD A +FGFRGEALASISDVSLLEIITKA GR
Sbjct: 61 CGISRDGLVLLGQRYVTSKLHHFADMDAANE--SFGFRGEALASISDVSLLEIITKARGR 118
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
PNGYRKV+KGSKCLYLG++D+RKDVGTTVV RDLFYNQPVRRK MQSS KKVL SVKKC+
Sbjct: 119 PNGYRKVLKGSKCLYLGVNDDRKDVGTTVVVRDLFYNQPVRRKCMQSSLKKVLDSVKKCI 178
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
LRIA VH KVSFK ID+ESEDELL T SS L+LL+SSFGIED +F E++ ++G L++
Sbjct: 179 LRIAFVHSKVSFKVIDIESEDELLYT-RPSSALSLLMSSFGIEDLNFFHELDVSNGVLKL 237
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SGYIS P +S+++K F+ D WKAN+ KGKR
Sbjct: 238 SGYISGPCNSLTIK---------------------------FESLDPWKANSIPQKGKRC 270
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH---- 356
+ Q CPAY+LNL CP +LYDLTF+P KTHV FK+W P+L FIE +++ W + +
Sbjct: 271 RPQVCPAYILNLSCPLALYDLTFEPSKTHVEFKEWIPILNFIENSVQYLWTGSMTYGMLS 330
Query: 357 -------------DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQ--RDHMF 401
D D D++E+ E + + H+ +L S K LA+ D F
Sbjct: 331 HLCIAVHDLYSSFDLLDADLIENNEFARDKHEIKKHKPCNYLPSPQFKMLAQNDVADDYF 390
Query: 402 HKECERITFQEFQKDPVELAEENTEMEFFSQPKHSSS 438
++ + + + ++L +N +E S SS
Sbjct: 391 LEDSTQRSSDHVENHILDLDWQNGSIELRSLEMDESS 427
>gi|356495309|ref|XP_003516521.1| PREDICTED: uncharacterized protein LOC100788019 [Glycine max]
Length = 1208
Score = 504 bits (1299), Expect = e-139, Method: Compositional matrix adjust.
Identities = 345/843 (40%), Positives = 454/843 (53%), Gaps = 100/843 (11%)
Query: 602 LKEENSKRELVSQPKYSSKLLDCPFAECLSPVLRKIDLHGWTSGNRFSLKGSYFLETCFL 661
K + SK + + Q YS LLD +A+C S V+RK + N L+G F
Sbjct: 412 FKVQQSKGDFLLQTGYSGNLLDGSYAKCNSTVMRKHNSLLMHDSNSL-LEGDNFFYGEIP 470
Query: 662 ADGRSSIPVEGDLLNSQRGYEYLQIEPGVSNGASGTASPLDKDEFSN-------EFEVSK 714
A +I V D +S G + ++E V N + + D N + +++
Sbjct: 471 AVESFNIDVPFDAPSSSHGRRFHKVEADVINES------FEDDLLYNSCSGYGYDVKING 524
Query: 715 DIKKPLRLSCFSQGSPPLGGPLFSGGEERCESSTGCFKYKRKRKRVCYDKRMDILEADFS 774
D+++P C GS LF E ++ K+ + Y D+
Sbjct: 525 DLQQPFLKRCSMLGSILHEKALFVNDEHELQTDGFWSKHNTEED---YRSGKDLY----- 576
Query: 775 NQSFDSFSRTPLQDEASCSQHLPRLSTAGDITAGFDLMSRASLNLFPSHAEPFTKETNFL 834
P ++ IT D + R P ++E
Sbjct: 577 ------------------VHRCPEVTKKLKITKDSDFLVR-----------PLSEENCLP 607
Query: 835 SDSIEP---VGNSVSDYKALNSVWCSKISDPFPQGASWNDGHF--IYNNALEGHSILGEG 889
DS +G+S SD + LN W P Q ++ H I + E
Sbjct: 608 PDSCYSALRIGSSGSDDQLLNFEWHPVHQIPSSQASALGVCHTTDIEDELGEISRYYKRI 667
Query: 890 TSCGQLADTEENYKFDYDSKLRRSNQEK--CTTARSGLRFEYYDNSSEDFCKYLQEHDPC 947
D E + +F Y+ R +NQ + + A G F+ + E F + + D
Sbjct: 668 HHTKHFDDREADCRFSYNMS-RNANQHRRASSFANIGFNFDVAGDCGEIFNRLVDRPDFG 726
Query: 948 NKFSREHSDVPFDKTDWLCS---VLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHS 1004
+ S + SD+ ++ DWL S + S + + +R +FRN E N E SRRS S
Sbjct: 727 DIHSSKRSDILNEEPDWLLSKSCIKSCKRPNKNKGKRDRFRNSTLEEN---LERSRRSFS 783
Query: 1005 APPFHRHKRRYISLNCCS-VEAGKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSS 1063
APPFHR KRR+ SLN S + A + + A N EA FK+ QQS + S+
Sbjct: 784 APPFHRSKRRFFSLNHPSEMIAKRQIGRVSNPAFNHQEASNFKYPQQSP----VALHQST 839
Query: 1064 EE---EDFRPDFKIESSTILDLEETHKA-----ENFKLSL-CPHAHLGAQAEGTSIISGT 1114
E+ ++F+ + K + + D+++ A E+F + P L ++ SI GT
Sbjct: 840 EDFLLQEFKINVKQTTEVLGDMQDNDIADIDEFESFNIQKSAPFGELISRDVQDSIDYGT 899
Query: 1115 KWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDK 1174
KWRN P+ T N+ +I +Q+NILDISSG LHL G+ IP++I+K CLEDAKVL QVDK
Sbjct: 900 KWRNCSPKITKNDKLANIQSQNNILDISSGFLHLAGDSLIPETISKKCLEDAKVLHQVDK 959
Query: 1175 KFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV---------- 1224
KFIPVVAG TLAVIDQHAADERIRLEELR KVLSGE K++ YLDAEQELV
Sbjct: 960 KFIPVVAGRTLAVIDQHAADERIRLEELRQKVLSGEEKAITYLDAEQELVCIYESENLIC 1019
Query: 1225 -------LPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1277
LPEIGYQLL +++EQIKDWGWICNIH Q S SF ++L++L R +TL+AVP
Sbjct: 1020 MIMVIQVLPEIGYQLLHSYSEQIKDWGWICNIHAQNSESFRRSLDILNRPQMAVTLIAVP 1079
Query: 1278 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1337
CI GV L+DVDLLEFLQQLADTDGSST PPSVLRVLN KACRGAIMFGDSLLPSEC+LIV
Sbjct: 1080 CILGVKLNDVDLLEFLQQLADTDGSSTIPPSVLRVLNLKACRGAIMFGDSLLPSECSLIV 1139
Query: 1338 EELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLN----NSSELWHGLHRGEISLKRAS 1393
EELK TSLCFQCAHGRPTTVPLVNLEALH QIA+L SS+ WHGLHR ++ ++RA+
Sbjct: 1140 EELKHTSLCFQCAHGRPTTVPLVNLEALHNQIAKLRLMNERSSDEWHGLHRHKVCIERAA 1199
Query: 1394 RRL 1396
+RL
Sbjct: 1200 QRL 1202
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/461 (50%), Positives = 308/461 (66%), Gaps = 36/461 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M +I LPEAVR+++RSG LFD TRVVEELVFNS+DA ATKV V+V +CY+KVVDDG
Sbjct: 1 MASIKPLPEAVRSSLRSGIFLFDFTRVVEELVFNSLDARATKVSVFVSTRSCYLKVVDDG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
SGI RD L L+GER+ATSK +L D++ + FGFRGEALASIS+VSLLEI+TK +GR
Sbjct: 61 SGIPRDELELVGERYATSKFLNLVDLNATSE--NFGFRGEALASISEVSLLEIVTKTYGR 118
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
PNGYRKV+KG KCLYLGIDD+RK+VGTTVV RDLFYNQPVRRKYMQSSP KVL S+K C+
Sbjct: 119 PNGYRKVLKGCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRKYMQSSPNKVLQSIKNCI 178
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
+R+ALV P +SFK +D+E EDEL CT S+SSPL L+ S FG+E S L + + +++
Sbjct: 179 MRLALVRPNISFKVVDIEREDELFCTHSASSPLPLVTSGFGVEVASSLHNLEVENDIVKL 238
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SGYIS P +++ KGP+HKL++ LA + +SW + F KR+
Sbjct: 239 SGYISGPCNTVYT--------------KGPVHKLVSQLANRLEHLNSWNTDKEFRSKKRT 284
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA----- 355
+ Q CPAYLLNL CP SLYDL F+P KTHV FKDW P+L FIE+AI+ W + +A
Sbjct: 285 RCQPCPAYLLNLSCPRSLYDLAFEPSKTHVKFKDWTPILNFIEKAIKQFWEENVACVDPS 344
Query: 356 -HDSFDV-DMLEDAELPLESS-------RFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE 406
++ V D E A++ + S+ R Q+ + L S NL + H + +
Sbjct: 345 NEATYMVEDQQEKADVNIISAVSDMSKFRNQNRKDCLDLFFSTSDNLIEDDYH----QSK 400
Query: 407 RITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAEC 447
R F ++ + ++ +F Q +S +LLDGS+A+C
Sbjct: 401 REDVDYFGATMFKV--QQSKGDFLLQTGYSGNLLDGSYAKC 439
>gi|357484163|ref|XP_003612368.1| MutL DNA mismatch repair protein [Medicago truncatula]
gi|355513703|gb|AES95326.1| MutL DNA mismatch repair protein [Medicago truncatula]
Length = 1293
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 351/891 (39%), Positives = 475/891 (53%), Gaps = 107/891 (12%)
Query: 567 LYSSPLENLSKEGDHLFREECERITFGEFEKHTPELKEENSKRELVSQPKYSSKLLDCPF 626
L+ S + L+++ +H E + + T LKE+ K + Q YS LLD +
Sbjct: 444 LFFSTSDKLNEDDNHQCYREDVITSIDYLYRGTKILKEKQKKGGHLCQTGYSGNLLDVSY 503
Query: 627 AECLSPVLRKIDLHGWTSGNRFSLKGSYFLE-TCFLADG-RSSIPVEGDLLNSQRGYEYL 684
A+ +S +++K + T N +G +FL+ C A+ +IP +S RG +
Sbjct: 504 AKSMSTIMKKSNSF-LTYDNNDLWQGVHFLDGMCPAAESFYDNIPSYAR--SSSRGRKLN 560
Query: 685 QIEPGVSNGASGTASPLDKDEFSNEFEVSKDIKKPLRLSCFSQGSPPLGGPLFSGGEERC 744
+ + G+ + + F + E+ + +KP SC +Q L +E
Sbjct: 561 EEDAGM---ICESFEGYECHGFGYDEEIGWNFQKPFLKSCSTQKDSILNEKTLLVNDE-L 616
Query: 745 ESSTGCFKYKRKRKRVCYDKRMDILEADFSNQSFDSFSRTPLQDEASCSQHLPRLSTAGD 804
+ T F K+ L DF + S D ++R C + +L + D
Sbjct: 617 QLQTDSFWSKQN------------LGEDFCSGSKDLYTRP-------CVEVAKKLKMSED 657
Query: 805 ITAGFDLMSRASLNLFPSHAEPFTKETNFLSDSIEPVGNSVSDYKALNSVWCSKISDPFP 864
+ F + + N P + S +GNS SD + NS W +
Sbjct: 658 --SDFLVKAWPEENCLPLDSWY----------SATQIGNSGSDDRLSNSEWHHVYQESSS 705
Query: 865 QGASWNDGHFIYNNALEGHSI-----------------------LGEGTSCG----QLAD 897
+ + + H N L G S LG + C + D
Sbjct: 706 RATALSVYHTNDINDLAGSSRCNKRIPRTPIFDDKENGNIFSYDLGGASRCSTRITHIFD 765
Query: 898 TEEN-YKFDYDSKLRRSNQEKCTT--ARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREH 954
EEN Y F YD R +NQ+ CT+ A SG F+ + E F + + D + +
Sbjct: 766 DEENGYNFSYDMS-RNANQDPCTSSFANSGFSFDGAVDCKEIFNRLVDWPDFHDTHFTKR 824
Query: 955 SDVPFDKTDWLCSVLSSIEYDNPET---QRYKFRNHNCEPNPIHKELSRRSHSAPPFHRH 1011
SD+ ++ D L I+ + P R FR+ E + S+RS SAPPFHR
Sbjct: 825 SDILIEEPDCLLPESCVIKCNRPNIIKGDRDLFRHPTLEKTRVR---SKRSFSAPPFHRS 881
Query: 1012 KRRYISLNCC-SVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSSEE--EDF 1068
+RR+ SLN + A + + A + EA FK+ Q S + P++E+ ++
Sbjct: 882 RRRFFSLNQPPQMVAKRPSGLASDPASSLLEASDFKYSQHSPDA----LSPNNEDLLDNL 937
Query: 1069 RPDFK-----IESSTILDLEETHKAENFKLSLC-PHAHLGAQAEGTSIISGTKWRNGHPQ 1122
+ + K + ++ + D ET E+F + P L ++ S+ GTKWR+ PQ
Sbjct: 938 KTNVKRSSEVLGATQVNDTAETEGFESFNVQQNDPFRELISKEVQDSVDYGTKWRSCAPQ 997
Query: 1123 T---TNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPV 1179
T + N DI +Q+NILDISSG LHL G+ IPD+I+K CLEDAKVL QVDKKFIP+
Sbjct: 998 TPVMLSKNDKIDIQSQNNILDISSGFLHLAGDSLIPDTISKKCLEDAKVLHQVDKKFIPI 1057
Query: 1180 VAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQ 1239
+AG TLAVIDQHA DERIRLE+LR KVLSGE K++ YLDAEQELVLPEIGYQLL ++ EQ
Sbjct: 1058 MAGRTLAVIDQHAGDERIRLEDLRQKVLSGEAKAITYLDAEQELVLPEIGYQLLHSYREQ 1117
Query: 1240 IKDWGWICNIHTQGSRSFN----------KNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1289
IKDWGWICNIHTQ S SF +NL+LL RQ I L+AVPCI GVNL+DVDL
Sbjct: 1118 IKDWGWICNIHTQNSESFRRYISQAVLLIRNLDLLNRQQMTIALVAVPCILGVNLNDVDL 1177
Query: 1290 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1349
LEFLQQLADTDGSST PPSV+R+LNSK+CRGAIMFGDSLLPSEC+L+VEELK TSLCFQC
Sbjct: 1178 LEFLQQLADTDGSSTMPPSVVRLLNSKSCRGAIMFGDSLLPSECSLLVEELKHTSLCFQC 1237
Query: 1350 AHGRPTTVPLVNLEALHKQIAQL----NNSSELWHGLHRGEISLKRASRRL 1396
AHGRPTTVPLVNLEAL QI +L +SS WHGL R E+S+ RA +RL
Sbjct: 1238 AHGRPTTVPLVNLEALRNQIDKLGLMNKSSSNKWHGLQRHEVSIDRAVQRL 1288
Score = 418 bits (1074), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/515 (44%), Positives = 317/515 (61%), Gaps = 63/515 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M T+ LPE+VR+++RS LFD TR+VEELV+NS+DA ATKV V+V + +CY+KVVDDG
Sbjct: 1 MATVRPLPESVRSSIRSAFSLFDFTRIVEELVYNSLDARATKVSVFVDIGSCYLKVVDDG 60
Query: 61 SGISRDGLVLLGERH-------ATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEI 113
GI+RDGL L+GER+ ATSK +LAD++ + FGFRGEALASIS+VSLLEI
Sbjct: 61 GGITRDGLELVGERYGVYSFNFATSKFLNLADLNATSE--NFGFRGEALASISEVSLLEI 118
Query: 114 ITKAHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
+T+A+GRPNGYRKV+KG KC+YLGIDD+RK+VGTTV+ ++FYNQPVRRK +QSSP KVL
Sbjct: 119 VTRAYGRPNGYRKVLKGCKCIYLGIDDDRKEVGTTVIVSEIFYNQPVRRKQIQSSPNKVL 178
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
S+KKCV+R+ALV P +SFK +D+E E EL C+ S++SPL+L+ + FG+E + L E+
Sbjct: 179 QSIKKCVMRLALVCPNISFKVVDIEREYELFCSHSAASPLSLVTTGFGVEVTNSLHELEV 238
Query: 234 NDGALEISGYISSPYDSISVKAFQ------------------------------------ 257
+ ++++GYIS P +++ +K
Sbjct: 239 ENDIIKLTGYISGPCNTLDMKVIHISNAKSQSPISSHRNFWYKMDLLSLEKESNDINICS 298
Query: 258 ----YVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLR 313
++ INS++VCKGP+HKLL+ LA F+ +SW A+N KR + Q CPAY+LNLR
Sbjct: 299 LTLTWLDINSQFVCKGPVHKLLSQLAIRFEHRNSWSADNESQNKKRGRFQPCPAYILNLR 358
Query: 314 CPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA-HDSFD------------ 360
CP SLY L+F+P KT+V FKDW P+L FIE+ I+ W IA DS +
Sbjct: 359 CPRSLYVLSFEPSKTYVEFKDWAPILNFIEKVIKQFWEGSIACGDSSNKASYMVQEDQRE 418
Query: 361 -VDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDPVE 419
VD AE + Q+ + L S L + +H ++E + +
Sbjct: 419 KVDATISAEADISKFGSQNRKDCLDLFFSTSDKLNEDDNHQCYREDVITSIDYLYRGTKI 478
Query: 420 LAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPK 454
L E+ + Q +S +LLD S+A+ + + K
Sbjct: 479 LKEKQKKGGHLCQTGYSGNLLDVSYAKSMSTIMKK 513
>gi|334187192|ref|NP_195277.5| DNA mismatch repair protein MLH3 [Arabidopsis thaliana]
gi|332661126|gb|AEE86526.1| DNA mismatch repair protein MLH3 [Arabidopsis thaliana]
Length = 1169
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 269/583 (46%), Positives = 343/583 (58%), Gaps = 70/583 (12%)
Query: 841 VGNSVSDYKALNSVWCSKISDPFPQGASWNDGHFIYNNALEGHSILGEGTSCGQLADTE- 899
VG+SV+ L+S W S P W + +G IL + G++ D E
Sbjct: 625 VGSSVTGSFCLSSEWSPMYSTP--SATKWESEY------QKGCRILEQSLRLGRMPDPEF 676
Query: 900 -----ENYKFDYDSKLRRSNQEKCTTARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREH 954
N KFD++ + C T F N + Q D K S H
Sbjct: 677 CFSAANNIKFDHEVI---PEMDCCETGTDS--FTAIQNCT-------QLADKICKSSWGH 724
Query: 955 SDVPFDKTDWLCSVLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHSAPPFHRHKRR 1014
+D + D ++ KF + N K+ S+RS SAPPF+R K+R
Sbjct: 725 AD--------------DVRIDQYSIRKEKFSYMDGTQNNAGKQRSKRSRSAPPFYREKKR 770
Query: 1015 YISLNCCSVEAGK----SNAHTLHCAKNSPEAGAFKHLQQS--SGVCNANVKPSSEEEDF 1068
+ISL+C S K S L C P + HL+ S V +++ + +
Sbjct: 771 FISLSCKSDTKPKNSDPSEPDDLECL-TQPCNASQMHLKCSILDDVSYDHIQETEKRLSS 829
Query: 1069 RPDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSIISGTKWRNGHPQTTNNNI 1128
D K + ET + H ++ I S TKWR+ +
Sbjct: 830 ASDLKASAGCRTVHSETQDED-------VHEDFSSEEFLDPIKSTTKWRHNCAVSQVPKE 882
Query: 1129 SCDIHNQDNILDISSGLLHL-TGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAV 1187
S ++H QD + DISSGLLHL + E +P+SIN+ LEDAKVLQQVDKK+IP+VA GT+A+
Sbjct: 883 SHELHGQDGVFDISSGLLHLRSDESLVPESINRHSLEDAKVLQQVDKKYIPIVACGTVAI 942
Query: 1188 IDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQEL--------------VLPEIGYQLL 1233
+DQHAADERIRLEELR KVL+G+ ++V YL A+QEL VLPE+GYQLL
Sbjct: 943 VDQHAADERIRLEELRTKVLAGKARTVTYLSADQELFINDALLIFVLTLKVLPEMGYQLL 1002
Query: 1234 QNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFL 1293
Q+++EQI+DWGWICNI +GS SF KN++++QR+ T ITL AVPCI GVNLSDVDLLEFL
Sbjct: 1003 QSYSEQIRDWGWICNITVEGSTSFKKNMSIIQRKPTPITLNAVPCILGVNLSDVDLLEFL 1062
Query: 1294 QQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGR 1353
QQLADTDGSST PPSVLRVLNSKACRGAIMFGDSLLPSEC+LI++ LKQTSLCFQCAHGR
Sbjct: 1063 QQLADTDGSSTIPPSVLRVLNSKACRGAIMFGDSLLPSECSLIIDGLKQTSLCFQCAHGR 1122
Query: 1354 PTTVPLVNLEALHKQIAQLNNSSELWHGLHRGEISLKRASRRL 1396
PTTVPLV+L+ALHKQIA+L+ ++WHGL R EI+L RA RL
Sbjct: 1123 PTTVPLVDLKALHKQIAKLSG-RQVWHGLQRREITLDRAKSRL 1164
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/360 (55%), Positives = 245/360 (68%), Gaps = 41/360 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M TI LPE VR+++RSG ++FD+ RVVEELVFNS+DAGATKV ++VGV +C VKVVDDG
Sbjct: 1 MKTIKPLPEGVRHSMRSGIIMFDMARVVEELVFNSLDAGATKVSIFVGVVSCSVKVVDDG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
SG+SRD LVLLGER+ATSK +++ A+ TFGFRGEALASISD+SLLE+ TKA GR
Sbjct: 61 SGVSRDDLVLLGERYATSKFHDFTNVETASE--TFGFRGEALASISDISLLEVRTKAIGR 118
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
PNGYRKVMKGSKCL+LGIDD+RKD GTTV RDLFY+QPVRRKYMQSSPKKVL S+KKCV
Sbjct: 119 PNGYRKVMKGSKCLHLGIDDDRKDSGTTVTVRDLFYSQPVRRKYMQSSPKKVLESIKKCV 178
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
RIALVH VSF +D+ES++EL T SSS +LL+ G E + L +VN DG L +
Sbjct: 179 FRIALVHSNVSFSVLDIESDEELFQTNPSSSAFSLLMRDAGTEAVNSLCKVNVTDGMLNV 238
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SG F+C+D WK +G G+R+
Sbjct: 239 SG---------------------------------------FECADDWKPTDGQQTGRRN 259
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFD 360
+ Q+ P Y+L + CP LY+ +F+P KTHV FK W PVLAFIER + W K + FD
Sbjct: 260 RLQSNPGYILCIACPRRLYEFSFEPSKTHVEFKKWGPVLAFIERITLANWKKDRILELFD 319
>gi|449456955|ref|XP_004146214.1| PREDICTED: uncharacterized protein LOC101213777 [Cucumis sativus]
Length = 1238
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 262/564 (46%), Positives = 327/564 (57%), Gaps = 75/564 (13%)
Query: 897 DTEENYKFDYDSKLRRSNQE--KCTTARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREH 954
D E+ +FDYD L SN++ K + S + + ++ ED +L++ CN F EH
Sbjct: 680 DDEKGCQFDYDIMLSSSNKKNYKSSCNDSTMIIDDVFDTREDLSTFLKK---CNDF--EH 734
Query: 955 SDVPFDKTD----------WLC---SVLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRR 1001
S P D W + PE F+ C E RR
Sbjct: 735 SS-PRSSPDMHSRQKYFSNWRLPERDCEKAYGSSEPEIGHQAFKQKYCSV-----ERPRR 788
Query: 1002 SHSAPPFHRHKRRYISLNCCSVE--------------AGKSNAHTLHCAK---------- 1037
SAPPF++ K + L+ E A KS+A + +C
Sbjct: 789 GKSAPPFYKRKTSFYCLDQRKAERADAASFYCLNKRKADKSSASSFYCMDQGKVEKLKAS 848
Query: 1038 ---NSP---EAGAFKHLQQSSGVCNANVKP------SSEEEDFRPDFKIESSTILDLEET 1085
+SP E + + SG N VKP E R D S+ + + EE
Sbjct: 849 VFLDSPPHLEPVELRDSEHISGTSNQYVKPFPVDDLLVETRSSRRDTTKMSAIMGNSEEK 908
Query: 1086 H----KAENFKLSLCPHAHLGA----QAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDN 1137
K + + + A + Q + + + + N S ++ +
Sbjct: 909 QGEISKQSQYDVKVTESAIVLTLFHFQNYAQRKLKSPQIYGSNGKIARNEDSHAFDDEVS 968
Query: 1138 ILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERI 1197
ILDISSG L L +PDSI+K+ LEDAKVL Q+DKKFIPVV+GG LAVIDQHAADERI
Sbjct: 969 ILDISSGFLSLASNSLVPDSIDKNFLEDAKVLLQLDKKFIPVVSGGILAVIDQHAADERI 1028
Query: 1198 RLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSF 1257
RLE+LR K+LSGE K+ AYLDAE ELVLPEIGYQLL N+A+Q+K+WGWICNIH Q S+SF
Sbjct: 1029 RLEDLRQKLLSGEAKTTAYLDAEHELVLPEIGYQLLYNYADQVKEWGWICNIHAQDSKSF 1088
Query: 1258 NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKA 1317
NLN+L +Q TVI L+AVPCI GVNLSDVDLLEFL QLADTDGS+T PPSVLRVLNSKA
Sbjct: 1089 RSNLNILHKQETVIMLMAVPCILGVNLSDVDLLEFLHQLADTDGSATMPPSVLRVLNSKA 1148
Query: 1318 CRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL----- 1372
CRGAIMFGDSLLPSEC+L+VEELKQTSLCFQCAHGRPTTVPLVNLEALHKQI +L
Sbjct: 1149 CRGAIMFGDSLLPSECSLLVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKELEIHGR 1208
Query: 1373 NNSSELWHGLHRGEISLKRASRRL 1396
+ S+ W+GL R E+S++R +RL
Sbjct: 1209 SGSNGTWNGLGRQELSIERMLQRL 1232
Score = 418 bits (1075), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/490 (48%), Positives = 311/490 (63%), Gaps = 51/490 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
MGTI LP++VRN+VR+G +L+D+T+VVEELV+NS+DAGA+K+ +++G+ YVKVVD+G
Sbjct: 1 MGTIKPLPKSVRNSVRAGVILYDVTKVVEELVYNSLDAGASKISIFIGIGTSYVKVVDNG 60
Query: 61 SGISRDGLVLLGERHA--------TSKLGHLADMDDATGIGTFGFRGEALASISDVSLLE 112
SGI+RDGLVLLGER+ TSK L D D+ G TFGFRGEALASISD SL+E
Sbjct: 61 SGITRDGLVLLGERYGKNLNFLLLTSKFHDLIDTDNKGG--TFGFRGEALASISDFSLVE 118
Query: 113 IITKAHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV 172
IIT+A GR NGYRKV+K +LGIDD+ +D GTTV+ RDLFYNQPVRRK+MQSSPKKV
Sbjct: 119 IITRACGRANGYRKVLK-----HLGIDDDMEDFGTTVIVRDLFYNQPVRRKHMQSSPKKV 173
Query: 173 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 232
LH+VKKCV R ALVH KVSFK ++ ES+ LLCT S SPL+LL S FG E L E+
Sbjct: 174 LHAVKKCVFRTALVHSKVSFKIVESESKSILLCTDPSPSPLSLLRSGFGSEVSRSLHELK 233
Query: 233 ANDGALEISGYISSPYDSISVKAFQYVY--------------INSRYVCKGPIHKLLNHL 278
G L++SGYI SP+D+ S+K + Y INSR++CKG IHKLLN L
Sbjct: 234 IGGGDLKLSGYICSPFDNFSIKVDRIHYSVFHEIVWTSARTDINSRFICKGQIHKLLNQL 293
Query: 279 AASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV 338
A+ F D + + F + KR +S+A PAY+LNL CP S YDLTF+ KT V FKDW P+
Sbjct: 294 ASRFTSLDP-QTDLAFHRRKRGRSEANPAYVLNLECPVSFYDLTFESSKTIVQFKDWTPI 352
Query: 339 LAFIERAIRSAWMKK-------------IAHDSFD-----VDMLEDAELPLESSRFQSHQ 380
L F+E AI+ W +K + +S+ + + L ++ SR QS Q
Sbjct: 353 LTFVEEAIQQFWKEKYNCGKSAVHSTPIVGDESWKDEDNTISTKSNDILSVKKSRMQSCQ 412
Query: 381 SSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDPVELAEEN---TEMEFFSQPKHSS 437
+S SP K D + +K C++ + +EL + + +M+F ++ H
Sbjct: 413 ASLIDSFSPSVTFTKHDDILSYKLCDKKACESSHTSSIELDDGDHHLAKMQFSNRADHFP 472
Query: 438 SLLDGSFAEC 447
D A+C
Sbjct: 473 KSWDTPLAKC 482
>gi|297802396|ref|XP_002869082.1| hypothetical protein ARALYDRAFT_328199 [Arabidopsis lyrata subsp.
lyrata]
gi|297314918|gb|EFH45341.1| hypothetical protein ARALYDRAFT_328199 [Arabidopsis lyrata subsp.
lyrata]
Length = 1119
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 295/712 (41%), Positives = 374/712 (52%), Gaps = 100/712 (14%)
Query: 706 FSNEFEVSKDIKKPLRLSCFSQGSPPLGGPLFSGGEERCESSTGCFKYKRKRKRVCYDKR 765
+E +VS I K L C S+ S L P S GE K+ RV
Sbjct: 482 LKDELDVSNCIGKHLLRGCSSRVSLTLHEPKLSHGEGSESVMPMILNEKQSSPRV----- 536
Query: 766 MDILEADFSNQSFDSFS-RTPLQDEASCSQHL----PRLST-AGDITAGFDLMSRASLNL 819
LE D FS RTP S Q P+ S+ G + G D N+
Sbjct: 537 ---LETREGGSYCDVFSDRTPNCSLGSSWQDTDWFTPQCSSDMGSVGIGKDS------NI 587
Query: 820 FPSHAEPFTKETNFLSD----SIEPVGNSVSDYKALNSVWCSKISDPFPQGASWNDGHFI 875
P F + + S VGNSV+ +L+S W S P W
Sbjct: 588 IPIGTAEFGSYEDKVGREKYHSYVNVGNSVTGSFSLSSEWSPMFSTP--SATKWE----- 640
Query: 876 YNNALEGHSILGEGTSCGQLADTE------ENYKFDYDSKLRRSNQEKCTTARSGLRFEY 929
++ +G IL G++ D E N FD++ + T A S +
Sbjct: 641 -SDYQKGCRILERSLRLGRMPDPEFCFSAANNINFDHEVIPEMDCWK--TGADSFTDIQN 697
Query: 930 YDNSSEDFCKYLQEHDPCNKFSREHSDVPFDKTDWLCSVLSSIEYDNPETQRYKFRNHNC 989
S E FCK EH + E + DK Y + H
Sbjct: 698 SIKSDEIFCKSSWEH--ADDVGIEQYSIRKDKFS------------------YGTQYH-- 735
Query: 990 EPNPIHKELSRRSHSAPPFHRHKRRYISLNCCSVEAGK----SNAHTLHCAKNSPEAGAF 1045
+ K+ S+RS SAPPF R K+R+ISL+C S K S L C A
Sbjct: 736 ----VGKQRSKRSRSAPPFCREKKRFISLSCISDTKSKNSDPSEPDDLECLTQPCNAS-- 789
Query: 1046 KHLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQA 1105
H+ + + N++ + + D K + ET + + ++
Sbjct: 790 -HMHLKCNILDDNIQETEKRLSSASDLKASAGCRTVHSETQDEDGGE-------DFSSEE 841
Query: 1106 EGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHL-TGEFFIPDSINKSCLE 1164
I S TKWR+ + S ++H+QD++LDISSGLLHL + E +P+SIN+ LE
Sbjct: 842 NLDPIKSTTKWRHNCAVSQVGKESHELHDQDSVLDISSGLLHLRSDESLVPESINRHSLE 901
Query: 1165 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV 1224
DAKVLQQVDKK+IP+VA GT+A++DQHAADERIRLEELR KVL
Sbjct: 902 DAKVLQQVDKKYIPIVACGTVAIVDQHAADERIRLEELRKKVL----------------- 944
Query: 1225 LPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNL 1284
PE+GYQLLQ++AEQI+DWGWICNI+ +GS SF KN++++QR+ T ITL AVPCI GVNL
Sbjct: 945 -PEMGYQLLQSYAEQIRDWGWICNINVEGSTSFKKNMSIIQRKSTPITLNAVPCILGVNL 1003
Query: 1285 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1344
SDVDLLEFLQQLADTDGSST PPSVLRVLNSKACRGAIMFGDSLLPSEC+LI++ LKQTS
Sbjct: 1004 SDVDLLEFLQQLADTDGSSTIPPSVLRVLNSKACRGAIMFGDSLLPSECSLIIDGLKQTS 1063
Query: 1345 LCFQCAHGRPTTVPLVNLEALHKQIAQLNNSSELWHGLHRGEISLKRASRRL 1396
LCFQCAHGRPTTVPLVNL+ALHKQIA+L+ ++WHG R EI+L RA RL
Sbjct: 1064 LCFQCAHGRPTTVPLVNLKALHKQIAKLSG-RQVWHGFQRREITLDRAKSRL 1114
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/352 (55%), Positives = 243/352 (69%), Gaps = 41/352 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M TI LPE VR+++RSG ++FD++RVVEE+VFNS+DAGATKV ++VGV +C VKVVDDG
Sbjct: 1 MKTIKPLPEGVRHSMRSGIIMFDMSRVVEEIVFNSLDAGATKVSIFVGVVSCSVKVVDDG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
SG+SRD LVLLGER+ATSK +++ T +FGFRGEALASISD+SLLE+ TKA GR
Sbjct: 61 SGVSRDDLVLLGERYATSKFHDFTNVE--TAGESFGFRGEALASISDISLLEVRTKAIGR 118
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
PNGYRKVMKGSKCL+LGIDD+RKD GTTV RDLFY+QPVRRKYMQSSPKKVL S+KKCV
Sbjct: 119 PNGYRKVMKGSKCLHLGIDDDRKDSGTTVTVRDLFYSQPVRRKYMQSSPKKVLESIKKCV 178
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
RIALVH VSF +D+ES++EL T SSS +LL+ G E + L +VN DG L +
Sbjct: 179 FRIALVHSNVSFSVLDIESDEELFQTNPSSSAFSLLMRDAGTEAVNSLCKVNVTDGMLNV 238
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SG F+C+D WK +G G+R+
Sbjct: 239 SG---------------------------------------FECADDWKPTDGQQTGRRN 259
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
+ Q+ P Y+L + CP LY+ +F+P KTHV FK W PVLA IER + ++W K
Sbjct: 260 RLQSNPGYILCITCPRHLYEFSFEPSKTHVEFKKWGPVLALIERIVLASWKK 311
>gi|3367570|emb|CAA20022.1| putative protein [Arabidopsis thaliana]
gi|7270503|emb|CAB80268.1| putative protein [Arabidopsis thaliana]
Length = 1151
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 260/569 (45%), Positives = 334/569 (58%), Gaps = 60/569 (10%)
Query: 841 VGNSVSDYKALNSVWCSKISDPFPQGASWNDGHFIYNNALEGHSILGEGTSCGQLADTE- 899
VG+SV+ L+S W S P W + +G IL + G++ D E
Sbjct: 625 VGSSVTGSFCLSSEWSPMYSTP--SATKWESEY------QKGCRILEQSLRLGRMPDPEF 676
Query: 900 -----ENYKFDYDSKLRRSNQEKCTTARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREH 954
N KFD++ + C T F N + Q D K S H
Sbjct: 677 CFSAANNIKFDHEVI---PEMDCCETGTDS--FTAIQNCT-------QLADKICKSSWGH 724
Query: 955 SDVPFDKTDWLCSVLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHSAPPFHRHKRR 1014
+D + D ++ KF + N K+ S+RS SAPPF+R K+R
Sbjct: 725 AD--------------DVRIDQYSIRKEKFSYMDGTQNNAGKQRSKRSRSAPPFYREKKR 770
Query: 1015 YISLNCCSVEAGK----SNAHTLHCAKNSPEAGAFKHLQQS--SGVCNANVKPSSEEEDF 1068
+ISL+C S K S L C P + HL+ S V +++ + +
Sbjct: 771 FISLSCKSDTKPKNSDPSEPDDLECL-TQPCNASQMHLKCSILDDVSYDHIQETEKRLSS 829
Query: 1069 RPDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSIISGTKWRNGHPQTTNNNI 1128
D K + ET + H ++ I S TKWR+ +
Sbjct: 830 ASDLKASAGCRTVHSETQDED-------VHEDFSSEEFLDPIKSTTKWRHNCAVSQVPKE 882
Query: 1129 SCDIHNQDNILDISSGLLHL-TGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAV 1187
S ++H QD + DISSGLLHL + E +P+SIN+ LEDAKVLQQVDKK+IP+VA GT+A+
Sbjct: 883 SHELHGQDGVFDISSGLLHLRSDESLVPESINRHSLEDAKVLQQVDKKYIPIVACGTVAI 942
Query: 1188 IDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWIC 1247
+DQHAADERIRLEELR K ++ + + L + VLPE+GYQLLQ+++EQI+DWGWIC
Sbjct: 943 VDQHAADERIRLEELRTKFIN-DALLIFVLTLK---VLPEMGYQLLQSYSEQIRDWGWIC 998
Query: 1248 NIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPP 1307
NI +GS SF KN++++QR+ T ITL AVPCI GVNLSDVDLLEFLQQLADTDGSST PP
Sbjct: 999 NITVEGSTSFKKNMSIIQRKPTPITLNAVPCILGVNLSDVDLLEFLQQLADTDGSSTIPP 1058
Query: 1308 SVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHK 1367
SVLRVLNSKACRGAIMFGDSLLPSEC+LI++ LKQTSLCFQCAHGRPTTVPLV+L+ALHK
Sbjct: 1059 SVLRVLNSKACRGAIMFGDSLLPSECSLIIDGLKQTSLCFQCAHGRPTTVPLVDLKALHK 1118
Query: 1368 QIAQLNNSSELWHGLHRGEISLKRASRRL 1396
QIA+L+ ++WHGL R EI+L RA RL
Sbjct: 1119 QIAKLSG-RQVWHGLQRREITLDRAKSRL 1146
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/360 (55%), Positives = 245/360 (68%), Gaps = 41/360 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M TI LPE VR+++RSG ++FD+ RVVEELVFNS+DAGATKV ++VGV +C VKVVDDG
Sbjct: 1 MKTIKPLPEGVRHSMRSGIIMFDMARVVEELVFNSLDAGATKVSIFVGVVSCSVKVVDDG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
SG+SRD LVLLGER+ATSK +++ A+ TFGFRGEALASISD+SLLE+ TKA GR
Sbjct: 61 SGVSRDDLVLLGERYATSKFHDFTNVETASE--TFGFRGEALASISDISLLEVRTKAIGR 118
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
PNGYRKVMKGSKCL+LGIDD+RKD GTTV RDLFY+QPVRRKYMQSSPKKVL S+KKCV
Sbjct: 119 PNGYRKVMKGSKCLHLGIDDDRKDSGTTVTVRDLFYSQPVRRKYMQSSPKKVLESIKKCV 178
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
RIALVH VSF +D+ES++EL T SSS +LL+ G E + L +VN DG L +
Sbjct: 179 FRIALVHSNVSFSVLDIESDEELFQTNPSSSAFSLLMRDAGTEAVNSLCKVNVTDGMLNV 238
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SG F+C+D WK +G G+R+
Sbjct: 239 SG---------------------------------------FECADDWKPTDGQQTGRRN 259
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFD 360
+ Q+ P Y+L + CP LY+ +F+P KTHV FK W PVLAFIER + W K + FD
Sbjct: 260 RLQSNPGYILCIACPRRLYEFSFEPSKTHVEFKKWGPVLAFIERITLANWKKDRILELFD 319
>gi|400202059|gb|AFP73613.1| mutL-like protein 3 [Hordeum vulgare subsp. vulgare]
Length = 1208
Score = 364 bits (935), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/375 (53%), Positives = 264/375 (70%), Gaps = 5/375 (1%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M I RLP++V +++RS +L DL RVVEELV+NS+DA A K+ V V V CYVKV DDG
Sbjct: 1 MQNIKRLPKSVHSSLRSSIILSDLPRVVEELVYNSIDANAKKIDVSVNVRACYVKVEDDG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDA-TGIGTFGFRGEALASISDVSLLEIITKAHG 119
GI+RD LVLLGE++ATSK + M DA + +FG GEALAS+SD+S++E+ TKA G
Sbjct: 61 CGIARDELVLLGEKYATSKFYDV--MGDAESSSRSFGLNGEALASLSDISVVEVRTKARG 118
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
RPN Y K++KGSKC +LGIDD+R+ VGTTVV+R+LFYNQPVRRK MQS K+ LH+VKKC
Sbjct: 119 RPNSYCKIIKGSKCSHLGIDDQREAVGTTVVARELFYNQPVRRKQMQSGHKRELHNVKKC 178
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
VL+IAL+HP++S + +D +SED+LL T SSSPL L+ SFG + S L E++ + +
Sbjct: 179 VLQIALIHPQLSVRLLDTDSEDQLLYTVPSSSPLHLISDSFGNDVSSCLHEISTSHQSWA 238
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG-K 298
+SG+IS P + K FQY+YINSR+V K PIH +LN LAASF S + ++ K
Sbjct: 239 LSGHISGPTNVFCNKDFQYLYINSRFVSKSPIHNILNSLAASFQSSVTRTIEEVDIQSRK 298
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
R K+ PA+LLN CP S YDL F+P KT V FKDW+ +L F E+ I + W K + S
Sbjct: 299 RQKTDVYPAFLLNFFCPRSSYDLHFEPSKTIVEFKDWQSILFFFEQTITNYWKKHLPQSS 358
Query: 359 FDVDMLEDAELPLES 373
+++D +PL+S
Sbjct: 359 -KGKVIDDTCVPLKS 372
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/407 (46%), Positives = 258/407 (63%), Gaps = 46/407 (11%)
Query: 1001 RSHSAPPFHRHKRRYISLNCCSVEA---GKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNA 1057
RS SAPPF++ KR++ LN + G T + P H+ + +
Sbjct: 814 RSCSAPPFYKGKRKFPGLNQPQTKLTADGDKAIPTKDSEEREPAPENISHMSATQPI--- 870
Query: 1058 NVKPSSEEEDFRP-DFKIESSTILDLEETHKA--ENFKLSLCPHAHLGAQAEGTSIISGT 1114
P + +F +F ++ + + EET ENF + T
Sbjct: 871 ---PETCSSEFSGLNFSLKGNLKMH-EETCSGGLENFPAQI------------------T 908
Query: 1115 KWRNGHPQTTNNNI-----SCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVL 1169
KWR+ Q T + +C D+IL+ISSG LHL+ +P+SI+K C E+A+VL
Sbjct: 909 KWRDDSDQHTALELPHIPSAC----YDDILNISSGPLHLSSSSLVPESIDKKCFEEARVL 964
Query: 1170 QQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIG 1229
Q+DKKFIPV++G L ++DQHAADERIRLEELR KVLS + + + YLD+E+E+ LPE G
Sbjct: 965 LQLDKKFIPVISGEMLLLVDQHAADERIRLEELRSKVLSDDDRGITYLDSEKEMALPEAG 1024
Query: 1230 YQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1289
+QL Q +AEQI+ WGWI N + S SF KN+N+L++Q V+TL AVPCI GV+L+ DL
Sbjct: 1025 FQLFQKYAEQIQKWGWIINNPSTSSHSFKKNMNILRKQGRVVTLAAVPCILGVDLTGKDL 1084
Query: 1290 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1349
+F+QQL ++DGSS+ P +VLR+LN KACRGAIMFGD+LLPSEC+LI+EELK TSLCFQC
Sbjct: 1085 TDFIQQLDESDGSSSIPAAVLRILNYKACRGAIMFGDALLPSECSLIIEELKATSLCFQC 1144
Query: 1350 AHGRPTTVPLVNLEALHKQIAQLNNSS------ELWHGLHRGEISLK 1390
AHGRPTTVP+VN+ +L +Q+A+L + S E WHGL + E SL+
Sbjct: 1145 AHGRPTTVPIVNVASLRRQLARLGSPSGRSEAEEPWHGLSQHEASLE 1191
>gi|222642049|gb|EEE70181.1| hypothetical protein OsJ_30259 [Oryza sativa Japonica Group]
Length = 1166
Score = 346 bits (888), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 196/434 (45%), Positives = 261/434 (60%), Gaps = 40/434 (9%)
Query: 987 HNCEPNPIHKELSRRSHSAPPFHRHKRRYISLN----CCSVEAGKSNAHTLHCAKNSPEA 1042
+ C P RS SAPPF+R KR++ LN + E GK ++
Sbjct: 753 YGCSQRPRLSRGRYRSRSAPPFYRGKRKFPRLNEPLTKLTTEGGKYTTVN--------DS 804
Query: 1043 GAFKHLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLG 1102
G +Q+ + NA +P E F DF DL + K + +C
Sbjct: 805 GDITPVQEYTSHMNA-TQPIPET--FSNDFS-------DLNFSLKG---NVKMCEEKCSD 851
Query: 1103 AQAEGTSIISGTKWRNGHPQTTNNNISCDI--------HNQDNILDISSGLLHLTGEFFI 1154
+ T+ TKWR+ + + + D++L IS G LHL+ +
Sbjct: 852 ELEDSTASDEITKWRDDSDHHAVEHFVPRVSELQHGPFEHDDDVLSISYGPLHLSCSVLV 911
Query: 1155 PDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSV 1214
P+ I+K+C E+A+VL Q+DKKFIPV++G L ++DQHAADERIRLEELR KVLS +G+ +
Sbjct: 912 PECIDKNCFEEARVLLQLDKKFIPVISGEVLLLVDQHAADERIRLEELRRKVLSDDGRGI 971
Query: 1215 AYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLL 1274
YLD+E++LVLPE G+QL Q + +QI+ WGWI N T SF KN+N+L+RQ +TL
Sbjct: 972 TYLDSEEDLVLPETGFQLFQKYMQQIQSWGWIIN-STNSCESFKKNMNVLRRQSRRLTLA 1030
Query: 1275 AVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1334
AVPCI GV L+ DL++F+QQL DTDGSS PP+V+R+LN KACRGAIMFGD LLPSEC+
Sbjct: 1031 AVPCILGVTLTGKDLMDFIQQLDDTDGSSAIPPAVIRILNFKACRGAIMFGDPLLPSECS 1090
Query: 1335 LIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL----NNSSELWHGLHRGEISLK 1390
LI+EELK TSLCFQCAHGRPTTVP+VN+ +L ++A+L E WHGL SL+
Sbjct: 1091 LIIEELKATSLCFQCAHGRPTTVPIVNVASLRGELARLGAVNGRQEETWHGLSHHGPSLE 1150
Query: 1391 RASRRL--LTGVRG 1402
RA RL L +RG
Sbjct: 1151 RARTRLRELRKLRG 1164
Score = 323 bits (829), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 176/352 (50%), Positives = 226/352 (64%), Gaps = 37/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M TI RLP++V +++RS VLFDL+RVVEELV+NS+DA A+K+ + V CYVKV DDG
Sbjct: 1 MQTIKRLPKSVHSSLRSSIVLFDLSRVVEELVYNSIDANASKIDISVNARACYVKVEDDG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
GI+RD LVL+GE++ATSK H +D +FG GEALAS+SD+S++E+ TKA GR
Sbjct: 61 CGITRDELVLVGEKYATSKF-HNVMVDGEPSSRSFGLNGEALASLSDISVVEVRTKARGR 119
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
PN Y K++KGSKC +LGID++R+ VGTTV+ R+LFYNQPVRRK MQSS K+ LH VKK V
Sbjct: 120 PNSYCKIIKGSKCSHLGIDEQREVVGTTVIVRELFYNQPVRRKQMQSSYKRELHLVKKSV 179
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
LR+AL+HP+VS + D+ESEDELL T SSSPL L+ + G S L E+ +D +
Sbjct: 180 LRVALIHPQVSLRLFDIESEDELLYTIPSSSPLPLVSNILGKNVSSCLHEIATSDKHFAL 239
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SG+IS P D V+ N + KR
Sbjct: 240 SGHISRPTD---------VFCNKEIDVRSK---------------------------KRQ 263
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
K++ PAYLLNL CP S YDL F+P +T V FKDW+ V+ F ER I W K
Sbjct: 264 KNEVYPAYLLNLCCPRSSYDLHFEPSQTIVEFKDWQTVMYFFERTITDYWKK 315
>gi|218202592|gb|EEC85019.1| hypothetical protein OsI_32312 [Oryza sativa Indica Group]
Length = 1167
Score = 345 bits (886), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 196/434 (45%), Positives = 260/434 (59%), Gaps = 38/434 (8%)
Query: 987 HNCEPNPIHKELSRRSHSAPPFHRHKRRYISLN----CCSVEAGKSNAHTLHCAKNSPEA 1042
+ C P RS SAPPF+R KR++ LN + E GK + N
Sbjct: 752 YGCSQRPRLSRGRYRSRSAPPFYRGKRKFPRLNEPLTKLTTEGGK------YTTVNDSGD 805
Query: 1043 GAFKHLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLG 1102
+Q+ + NA +P E F DF DL + K + +C
Sbjct: 806 ADITPVQEYTSHMNA-TQPIPET--FSNDFS-------DLNFSLKG---NVKMCEEKCSD 852
Query: 1103 AQAEGTSIISGTKWRNGHPQTTNNNISCDI--------HNQDNILDISSGLLHLTGEFFI 1154
+ T+ TKWR+ + + + D++L IS G LHL+ +
Sbjct: 853 ELEDSTASDEITKWRDDSDHHAVEHFVPRVSELQHGPFEHDDDVLSISYGPLHLSCSVLV 912
Query: 1155 PDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSV 1214
P+ I+K+C E+A+VL Q+DKKFIPV++G L ++DQHAADERIRLEELR KVLS +G+ +
Sbjct: 913 PECIDKNCFEEARVLLQLDKKFIPVISGEVLLLVDQHAADERIRLEELRRKVLSDDGRGI 972
Query: 1215 AYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLL 1274
YLD+E++LVLPE G+QL Q + +QI+ WGWI N T SF KN+N+L+RQ +TL
Sbjct: 973 TYLDSEEDLVLPETGFQLFQKYMQQIQSWGWIIN-STNSCESFKKNMNVLRRQSRRLTLA 1031
Query: 1275 AVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1334
AVPCI GV L+ DL++F+QQL DTDGSS PP+V+R+LN KACRGAIMFGD LLPSEC+
Sbjct: 1032 AVPCILGVTLTGKDLMDFIQQLDDTDGSSAIPPAVIRILNFKACRGAIMFGDPLLPSECS 1091
Query: 1335 LIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL----NNSSELWHGLHRGEISLK 1390
LI+EELK TSLCFQCAHGRPTTVP+VN+ +L ++A+L E WHGL SL+
Sbjct: 1092 LIIEELKATSLCFQCAHGRPTTVPIVNVASLRGELARLGAVNGRQEETWHGLSHHGPSLE 1151
Query: 1391 RASRRL--LTGVRG 1402
RA RL L +RG
Sbjct: 1152 RARTRLRELRKLRG 1165
Score = 323 bits (829), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 176/352 (50%), Positives = 226/352 (64%), Gaps = 37/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M TI RLP++V +++RS VLFDL+RVVEELV+NS+DA A+K+ + V CYVKV DDG
Sbjct: 1 MQTIKRLPKSVHSSLRSSIVLFDLSRVVEELVYNSIDANASKIDISVNARACYVKVEDDG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
GI+RD LVL+GE++ATSK H +D +FG GEALAS+SD+S++E+ TKA GR
Sbjct: 61 CGITRDELVLVGEKYATSKF-HNVMVDGEPSSRSFGLNGEALASLSDISVVEVRTKARGR 119
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
PN Y K++KGSKC +LGID++R+ VGTTV+ R+LFYNQPVRRK MQSS K+ LH VKK V
Sbjct: 120 PNSYCKIIKGSKCSHLGIDEQREVVGTTVIVRELFYNQPVRRKQMQSSYKRELHLVKKSV 179
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
LR+AL+HP+VS + D+ESEDELL T SSSPL L+ + G S L E+ +D +
Sbjct: 180 LRVALIHPQVSLRLFDIESEDELLYTIPSSSPLTLVSNILGKNVSSCLHEIATSDKHFAL 239
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SG+IS P D V+ N + KR
Sbjct: 240 SGHISRPTD---------VFCNKEIDVRSK---------------------------KRQ 263
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
K++ PAYLLNL CP S YDL F+P +T V FKDW+ V+ F ER I W K
Sbjct: 264 KNEVYPAYLLNLCCPRSSYDLHFEPSQTIVEFKDWQTVMYFFERTITDYWKK 315
>gi|356540882|ref|XP_003538913.1| PREDICTED: uncharacterized protein LOC100780255 [Glycine max]
Length = 806
Score = 332 bits (851), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 203/478 (42%), Positives = 269/478 (56%), Gaps = 104/478 (21%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATK-------VFVYVGVCNCY 53
M +I L EAVR+++RSG L D TRVVEELVFNS+DA ATK V V+V +CY
Sbjct: 1 MASIKLLSEAVRSSLRSGIFLVDFTRVVEELVFNSLDARATKGETEKLKVSVFVSTGSCY 60
Query: 54 VKVVDDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEI 113
+KVVDDGSGI RDG+ ++GER+ATSK +L D++ ++ FGFRGE LASIS+VSLLEI
Sbjct: 61 LKVVDDGSGIPRDGMEMVGERYATSKFLNLVDLNASSE--NFGFRGEVLASISEVSLLEI 118
Query: 114 ITKAHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
+TK +GRPNGYR KG KCLYLGIDD+RK++GTTV S P+R
Sbjct: 119 VTKTYGRPNGYR---KGCKCLYLGIDDDRKEMGTTVSSISEL-EVPIR------------ 162
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
EDEL CT S+SSPL+L+ S FG+E S L +
Sbjct: 163 --------------------------EDELFCTHSASSPLSLVTSGFGVEVTSSLHNLEV 196
Query: 234 NDGALEISGYISSPYDSISVK---------------AFQYVYINSRYVCKGPIHKLLNHL 278
+ +++SGYIS P +++ K A QYVY NS++VCKGP+HKL+ L
Sbjct: 197 ENDIIKLSGYISGPCNTVDTKILSGCPPLTFGAFLQALQYVYANSQFVCKGPVHKLMRQL 256
Query: 279 AASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV 338
A F+ +SW + F KR++ Q CPAYLLNL CP SLYDL F+P KT V FKDW P+
Sbjct: 257 ANRFEHLNSWNTDEEFQNKKRTRCQPCPAYLLNLSCPRSLYDLAFEPSKT-VKFKDWAPI 315
Query: 339 LAFIERAIRSAWMKKIAHDSFD--VDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQ 396
L FI +AI+ W + +A D + M+ED Q H SS
Sbjct: 316 LNFIVKAIKQFWEENVACDPSNGATYMVED----------QHHFSS-------------- 351
Query: 397 RDHMFHKECERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPK 454
++ + + F+ E+ ++ +F Q +S +LLDGS+A+C V K
Sbjct: 352 ----IREDVDYLGVTIFK-------EKQSKGDFLLQTGYSGNLLDGSYAKCTSTVMRK 398
Score = 204 bits (518), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 146/213 (68%), Gaps = 13/213 (6%)
Query: 1041 EAGAFKHLQQSSGVCNANVKPSSEE---EDFRPDFKIESSTILDLE-----ETHKAENFK 1092
EA FK+ QQS + S+EE ++F+ + K S + D++ + E+F
Sbjct: 598 EASNFKYPQQSP----VGLHHSTEEFLLQEFKINVKRTSEVLGDMQVNDITDIDGFESFN 653
Query: 1093 L-SLCPHAHLGAQAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGE 1151
+ + P L ++ S+ GTKWRN P+ T N+ +I +Q+NILDISSG LHL G+
Sbjct: 654 IQNSAPFGELISRGVQDSLDYGTKWRNCSPKITKNDKLANIQSQNNILDISSGFLHLAGD 713
Query: 1152 FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEG 1211
IP++I+K CLEDAKVL QVDKKFI VVAG TLAVIDQHAADERIRLEEL KVLSGE
Sbjct: 714 SLIPETISKKCLEDAKVLHQVDKKFILVVAGRTLAVIDQHAADERIRLEELCQKVLSGEA 773
Query: 1212 KSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
K++ YL AEQELVLPEIGYQLL +++E+IKDWG
Sbjct: 774 KAITYLGAEQELVLPEIGYQLLHSYSEKIKDWG 806
>gi|242050106|ref|XP_002462797.1| hypothetical protein SORBIDRAFT_02g032160 [Sorghum bicolor]
gi|241926174|gb|EER99318.1| hypothetical protein SORBIDRAFT_02g032160 [Sorghum bicolor]
Length = 786
Score = 315 bits (807), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/310 (53%), Positives = 207/310 (66%), Gaps = 40/310 (12%)
Query: 1127 NISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTL- 1185
+ISC Q SSG L L IP+ ++K+C E+A+VL Q+DKKFIPV++G T+
Sbjct: 467 DISCMSSTQPVPETDSSGFLDLNFSSLIPECVDKNCFEEARVLLQLDKKFIPVISGETIL 526
Query: 1186 -----------------------------------AVIDQHAADERIRLEELRHKVLSGE 1210
A DQHAADERIRLE+LR KVLS E
Sbjct: 527 LVDQGFDNIVTDSSILSIPVIFVGIIMLWKYYLVPAAFDQHAADERIRLEDLRSKVLSEE 586
Query: 1211 GKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV 1270
G V+YLD+E+EL LPE G+QL Q +AEQI+ WGWI + + S SF KN+N+L+RQ+ +
Sbjct: 587 GHGVSYLDSEEELSLPETGFQLFQKYAEQIQKWGWIISSGSNSSESFKKNMNVLKRQVRL 646
Query: 1271 ITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLP 1330
+TL+AVPCI GV L+ DL+EF+ QL +TDGSS PP+VLR+LN KACRGAIMFGDSLLP
Sbjct: 647 VTLVAVPCILGVKLTGKDLMEFIWQLDETDGSSDIPPAVLRILNFKACRGAIMFGDSLLP 706
Query: 1331 SECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLNNSS----ELWHGLHRGE 1386
SEC LI+EELK TSLCFQCAHGRPTT P++N+ ALH+++A+L S E WHGL E
Sbjct: 707 SECCLIIEELKATSLCFQCAHGRPTTAPILNVTALHEELARLQTLSGTQAETWHGLGHHE 766
Query: 1387 ISLKRASRRL 1396
SL+RA RL
Sbjct: 767 PSLERAQMRL 776
>gi|357154509|ref|XP_003576807.1| PREDICTED: uncharacterized protein LOC100827102 [Brachypodium
distachyon]
Length = 1001
Score = 310 bits (795), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/325 (50%), Positives = 220/325 (67%), Gaps = 14/325 (4%)
Query: 1082 LEET--HKAENFKLSLCPHAHLGAQAE----GTSIISGTKWRNGHPQTTN---NNISCDI 1132
+E+T H + F L+ PH+H A+ + G S S W + + +IS
Sbjct: 662 IEDTYFHFSHPFSLADTPHSHSHARTDLELHGESNKSFAYWSSENIDNATPAPEDISQMS 721
Query: 1133 HNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHA 1192
Q SS L +P+ I+K C E+A+VL Q+DKKFIPV++G L ++DQHA
Sbjct: 722 ATQPIPETSSSDFSALNLSSLVPEYIDKKCFEEARVLFQLDKKFIPVISGEMLLLVDQHA 781
Query: 1193 ADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQ 1252
ADERIRLEELR KVLS E + + YLD+E+++ LPE G+QL Q ++EQI+ WGWI N +
Sbjct: 782 ADERIRLEELRGKVLSDEDRGITYLDSEEDMALPETGFQLFQKYSEQIQKWGWIINGSSS 841
Query: 1253 GSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV 1312
S+SF KN+N+L+RQ ++ L AVPCI GV+L+ DL++F+QQL ++DGSST PP+VLR+
Sbjct: 842 SSQSFKKNMNILRRQARLVALTAVPCILGVDLTGKDLMDFIQQLDESDGSSTIPPAVLRI 901
Query: 1313 LNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1372
LN KACRGAIMFGD LLPSEC LI+EELK TSLCFQCAHGRPTTVP+VN+ +L ++A+L
Sbjct: 902 LNFKACRGAIMFGDPLLPSECCLIIEELKATSLCFQCAHGRPTTVPIVNVASLRDELARL 961
Query: 1373 N-----NSSELWHGLHRGEISLKRA 1392
+ +E WHGL L+RA
Sbjct: 962 GTLNGRSQTEPWHGLSHHGPCLERA 986
Score = 308 bits (788), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 196/454 (43%), Positives = 264/454 (58%), Gaps = 60/454 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M TI RLP++V +++RS VL DL RVVEEL++NS+DA A K+ + + V +CYVKV DDG
Sbjct: 12 MQTIKRLPKSVHSSLRSSIVLSDLLRVVEELIYNSIDANAKKIDISLNVRSCYVKVEDDG 71
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
GI+RD LVLLGE++ATSK H + D + +FG GEALAS+SD+S++E+ TK+ GR
Sbjct: 72 CGITRDELVLLGEKYATSKF-HDSMGDGESASRSFGLNGEALASLSDISVVEVRTKSRGR 130
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
PN Y K++KGSKC +LGIDD+R+ VGTTVV R+LFYNQPVRRK MQSS K+ L +VKKCV
Sbjct: 131 PNSYCKIIKGSKCSHLGIDDQREAVGTTVVVRELFYNQPVRRKQMQSSHKRELQNVKKCV 190
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
LR+AL+HP++SF+ +D++SEDELLCT SSS L L+ +SFG + S L E++ +D +
Sbjct: 191 LRVALIHPQISFRLLDIDSEDELLCTVPSSSSLPLISNSFGNDVSSCLHEISTSDQNWAL 250
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SG+IS P D S K+ + N N KR
Sbjct: 251 SGHISGPTDVFSNKS-SMIRTN---------------------------GENDVQSRKRQ 282
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFK---------------DWEPVLAFIERA 345
K+ PAYLLN CP S YDL ++P KT V FK DW+ +L E
Sbjct: 283 KTDVYPAYLLNFFCPRSSYDLYYEPSKTVVEFKLLRFFIFPSSFLTIQDWQSILFIFEDT 342
Query: 346 IRSAWMKKIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKEC 405
I + W K + S + D +PL + + + L ++N K+ D HK
Sbjct: 343 IINYWKKHVPQPSKGKAI--DTSVPL---KCDGKSNGSLLRHQNVQN--KEDDVDLHK-- 393
Query: 406 ERITFQEFQKDPVELAEENTEMEFFSQPKHSSSL 439
+ QK V E N M+ + PK S S
Sbjct: 394 -----RSLQKSVVR--ESNVCMDAATGPKDSHSF 420
>gi|50726320|dbj|BAD33895.1| DNA mismatch repair protein -like [Oryza sativa Japonica Group]
Length = 1249
Score = 308 bits (788), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/352 (49%), Positives = 221/352 (62%), Gaps = 43/352 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
+ TI RLP++V +++RS VLFDL+RVVEEL+ SV+A A CYVKV DDG
Sbjct: 108 INTIKRLPKSVHSSLRSSIVLFDLSRVVEELIDISVNARA-----------CYVKVEDDG 156
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
GI+RD LVL+GE++ATSK H +D +FG GEALAS+SD+S++E+ TKA GR
Sbjct: 157 CGITRDELVLVGEKYATSKF-HNVMVDGEPSSRSFGLNGEALASLSDISVVEVRTKARGR 215
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
PN Y K++KGSKC +LGID++R+ VGTTV+ R+LFYNQPVRRK MQSS K+ LH VKK V
Sbjct: 216 PNSYCKIIKGSKCSHLGIDEQREVVGTTVIVRELFYNQPVRRKQMQSSYKRELHLVKKSV 275
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
LR+AL+HP+VS + D+ESEDELL T SSSPL L+ + G S L E+ +D +
Sbjct: 276 LRVALIHPQVSLRLFDIESEDELLYTIPSSSPLPLVSNILGKNVSSCLHEIATSDKHFAL 335
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SG+IS P D K FQ I+ R KR
Sbjct: 336 SGHISRPTDVFCNKDFQNEEIDVR-------------------------------SKKRQ 364
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
K++ PAYLLNL CP S YDL F+P +T V FKDW+ V+ F ER I W K
Sbjct: 365 KNEVYPAYLLNLCCPRSSYDLHFEPSQTIVEFKDWQTVMYFFERTITDYWKK 416
Score = 295 bits (754), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 180/433 (41%), Positives = 246/433 (56%), Gaps = 56/433 (12%)
Query: 987 HNCEPNPIHKELSRRSHSAPPFHRHKRRYISLN----CCSVEAGKSNAHTLHCAKNSPEA 1042
+ C P RS SAPPF+R KR++ LN + E GK ++
Sbjct: 854 YGCSQRPRLSRGRYRSRSAPPFYRGKRKFPRLNEPLTKLTTEGGKYTTVN--------DS 905
Query: 1043 GAFKHLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLG 1102
G +Q+ + NA +P E F DF DL + K + +C
Sbjct: 906 GDITPVQEYTSHMNA-TQPIPET--FSNDFS-------DLNFSLKG---NVKMCEEKCSD 952
Query: 1103 AQAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSC 1162
+ T+ TKWR+ D H ++ + L+ +P+ I+K+C
Sbjct: 953 ELEDSTASDEITKWRD----------DSDHHAVEHFVPRVISLV------LVPECIDKNC 996
Query: 1163 LEDAKVLQQVDKKFIPVVAGGTLAVIDQ-------HAADERIRLEELRHKVLSGEGKSVA 1215
E+A+VL Q+DKKFIPV++G L ++DQ H E + + + KVLS +G+ +
Sbjct: 997 FEEARVLLQLDKKFIPVISGEVLLLVDQEEFIFYVHILYEVVSVY-MVTKVLSDDGRGIT 1055
Query: 1216 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
YLD+E++LVLPE G+QL Q + +QI+ WGWI N T SF KN+N+L+RQ +TL A
Sbjct: 1056 YLDSEEDLVLPETGFQLFQKYMQQIQSWGWIIN-STNSCESFKKNMNVLRRQSRRLTLAA 1114
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1335
VPCI GV L+ DL++F+QQL DTDGSS PP+V+R+LN KACRGAIMFGD LLPSEC+L
Sbjct: 1115 VPCILGVTLTGKDLMDFIQQLDDTDGSSAIPPAVIRILNFKACRGAIMFGDPLLPSECSL 1174
Query: 1336 IVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL----NNSSELWHGLHRGEISLKR 1391
I+EELK TSLCFQCAHGRPTTVP+VN+ +L ++A+L E WHGL SL+R
Sbjct: 1175 IIEELKATSLCFQCAHGRPTTVPIVNVASLRGELARLGAVNGRQEETWHGLSHHGPSLER 1234
Query: 1392 ASRRL--LTGVRG 1402
A RL L +RG
Sbjct: 1235 ARTRLRELRKLRG 1247
>gi|414590137|tpg|DAA40708.1| TPA: hypothetical protein ZEAMMB73_047996 [Zea mays]
Length = 1132
Score = 293 bits (751), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 173/396 (43%), Positives = 240/396 (60%), Gaps = 39/396 (9%)
Query: 1001 RSHSAPPFHRHKRRYISLNCCSVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVK 1060
RSHSAPPF+R K ++ LN + +++ C N+PE A + C ++ +
Sbjct: 758 RSHSAPPFYRGKLKFSRLNV-PLSKPSTDSDKDICV-NNPEDNAPGPVDIP---CISSTQ 812
Query: 1061 PSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSIISGTKWRNGH 1120
P E +SS DL K + +L++ P + ++ ++ +
Sbjct: 813 PIPE---------TDSSEFPDLNFRGKLKFSRLNV-PLSKPSTDSDKDICVNNPEDNAPG 862
Query: 1121 PQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV 1180
P +I C Q SS L IP+ ++K+C E+A+VL Q+DKKFIPV+
Sbjct: 863 PV----DIPCISSTQPIPETDSSEFPDLNFSSLIPECVDKNCFEEARVLLQLDKKFIPVI 918
Query: 1181 AGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQI 1240
+G T+ ++DQ VLS EG V+YLD+E+EL LPE G+QL Q +AEQI
Sbjct: 919 SGETILLVDQ---------------VLS-EGHGVSYLDSEEELSLPETGFQLFQKYAEQI 962
Query: 1241 KDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTD 1300
+ WGWI + + S SF KN+N+L+RQ+ ++TL+AVPCIFGV L+ DL+EF+ QL +TD
Sbjct: 963 QKWGWIISGGSNSSESFKKNMNILKRQVRLVTLVAVPCIFGVKLTGKDLMEFIWQLDETD 1022
Query: 1301 GSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV 1360
GSS PP+VLR+LN KACRGAIMFGD LLPSEC LI+EELK TSLCFQCAHGRPTTVP++
Sbjct: 1023 GSSDMPPAVLRILNFKACRGAIMFGDPLLPSECCLIIEELKATSLCFQCAHGRPTTVPIL 1082
Query: 1361 NLEALHKQIAQLN----NSSELWHGLHRGEISLKRA 1392
N+ +LH ++A+L +E WHGL E SL+RA
Sbjct: 1083 NIASLHDELARLQMLSGRKAETWHGLGHHEPSLERA 1118
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 172/352 (48%), Gaps = 95/352 (26%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
M TI RLP++V +++RSG +L DL RV+EEL++NS+DA A+K+ + V + CYVKV
Sbjct: 61 MQTIKRLPKSVHSSLRSGVILSDLPRVIEELIYNSIDANASKIDIAVNIRACYVKV---- 116
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
DD GI R E L+ + K +G
Sbjct: 117 -------------------------EDDGCGIT----RDE---------LVLLGEKYNGS 138
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
P K D + +V R+LFYNQPVRRK MQSS K+ LH VKKCV
Sbjct: 139 PAISVKT------------DYVISLFVFLVVRELFYNQPVRRKQMQSSEKRELHHVKKCV 186
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
L+IAL+HP++S + +D +SEDELL T SSSPL L+ +FG + L E+ A+D +
Sbjct: 187 LQIALIHPQISLRLLDNDSEDELLYTEISSSPLPLISKTFGDDISRCLHEITASDQVWTL 246
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SG+IS P D K+ KR
Sbjct: 247 SGHISGPADVFCTKS-----------------------------------------RKRQ 265
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
K+ PA++LN CP S YDL F+P KT V FKDW VL F E+++ + W K
Sbjct: 266 KADIYPAFILNFYCPRSTYDLHFEPTKTIVEFKDWRTVLLFFEQSVTNYWKK 317
>gi|449529950|ref|XP_004171960.1| PREDICTED: uncharacterized LOC101213777 [Cucumis sativus]
Length = 527
Score = 200 bits (509), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 206/416 (49%), Gaps = 62/416 (14%)
Query: 897 DTEENYKFDYDSKLRRSNQE--KCTTARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREH 954
D E+ +FDYD L SN++ K + S + + ++ ED +L++ CN F EH
Sbjct: 86 DDEKGCQFDYDIMLSSSNKKNYKSSCNDSTMIIDDVFDTREDLSTFLKK---CNNF--EH 140
Query: 955 SDVPFDKTDWLCSVLSSIEYDNPETQRYKFRNHNCEPNPIHK---------ELSRRSHSA 1005
S P D L + PE K + EP H+ E RR SA
Sbjct: 141 SS-PRSSPDMLSRQKYFSNWRLPERDCEKAYG-SSEPEFGHQAFKQKYCSVERPRRGKSA 198
Query: 1006 PPFHRHKRRYISLNCCSVE--------------AGKSNAHTLHCAK-------------N 1038
PPF++ K + L+ E A KS+A + +C +
Sbjct: 199 PPFYKRKTSFYCLDQRKAERADAASFYCLNKRKADKSSASSFYCMDQGKVEKLKASVFLD 258
Query: 1039 SP---EAGAFKHLQQSSGVCNANVKPSS------EEEDFRPDFKIESSTILDLEETH--- 1086
SP E + + SG N VKP E R D S+ + + EE
Sbjct: 259 SPPHLEPVELRDSEHISGTSNQYVKPFPVDDLLVETRSSRRDTTKMSAIMGNSEEKQGEI 318
Query: 1087 -KAENFKLSLCPHAHLGA----QAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDI 1141
K + + + A + Q + + + + N S ++ +ILDI
Sbjct: 319 SKQSQYDVKVTESAIVLTLFHFQNYAQRKLKSPQIYGSNGKIARNEDSHAFDDEVSILDI 378
Query: 1142 SSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE 1201
SSG L L +PDSI+K+ LEDAKVL Q+DKKFIPVV+GG LAVIDQHAADERIRLE+
Sbjct: 379 SSGFLSLASNSLVPDSIDKNFLEDAKVLLQLDKKFIPVVSGGILAVIDQHAADERIRLED 438
Query: 1202 LRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSF 1257
LR K+LSGE K+ A LDAE ELVLPEIGYQLL N+A+Q+K+WGWICNIH Q S+SF
Sbjct: 439 LRQKLLSGEAKTTASLDAEHELVLPEIGYQLLYNYADQVKEWGWICNIHAQDSKSF 494
>gi|390352990|ref|XP_780519.3| PREDICTED: uncharacterized protein LOC575007 [Strongylocentrotus
purpuratus]
Length = 1638
Score = 200 bits (509), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 198/367 (53%), Gaps = 28/367 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
+ I L + V+N +RSG + + VEELV NS+DAGA+ + V V + +C V+VVD+G
Sbjct: 7 LAPIQYLSQDVKNQLRSGIATPSVVQCVEELVVNSIDAGASCIAVRVDLPDCKVQVVDNG 66
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHG 119
GI++D ++ +GER+ATSK D+++ I +G+RGEALASI ++ S+LEI ++A G
Sbjct: 67 RGITKDDMLYVGERYATSKCHDTKDLEN---ISHYGYRGEALASIKEISSVLEISSRARG 123
Query: 120 RPNGYRKVMKGSKCLYLGIDDE---RKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
Y K+ + K GI R GTTV + ++FYN PVRRK + S V +
Sbjct: 124 SEVTYSKLYRHGK--DQGISKHSKVRPSGGTTVAAHNVFYNLPVRRKVLCS--PLVYEQI 179
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
K + I+L+HP++S + + + + T +SSS + FG + L EVN
Sbjct: 180 CKRLQAISLIHPQISLTLRNDSTGVKSIQTHNSSSIVQTFGYLFGKDVADCLKEVNHIRT 239
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+SG+I S S K+ Q+VY+N R V K IHKL+N L ++ + S N
Sbjct: 240 IFNVSGFIGST--SFRNKSLQFVYVNGRLVLKTKIHKLINELLSNSLVTKSKGKNQDTAL 297
Query: 297 GKRSKSQACPA---------------YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF 341
G KS A + ++LN+ CP S YD+T DP KT + F+DWE +
Sbjct: 298 GYTMKSNAASSTCQPSPGGNQVEYGIFVLNITCPRSEYDITLDPSKTLIEFRDWEGAVTC 357
Query: 342 IERAIRS 348
+ + S
Sbjct: 358 VHELVTS 364
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 120/271 (44%), Gaps = 49/271 (18%)
Query: 1140 DISSGLLHLTGEF--FIPDSIN-----KSCLEDAKVLQQVDKKFI-----------PVVA 1181
++S GL + +F + S+N K+ KVL QVD KFI P
Sbjct: 1358 NVSEGLSSVDAKFQAMVLSSLNPCQFTKAMFNSIKVLGQVDTKFIACLVNSDYDKNPAGE 1417
Query: 1182 GGTLAVIDQHAADERIRLEELRHKVLS--------GEGKSVAYLDAEQELVLPEIGY--- 1230
L ++DQHAA ERIRLE L + K+ +E L IG
Sbjct: 1418 SNLLILVDQHAAHERIRLEMLIQDAYTPRVDTDDIDNDKTRCIRTSEVTPAL-RIGLSPS 1476
Query: 1231 --QLLQNFAEQIKDWGWICNIHTQGSRS-------FNKNLNLLQRQITVITLLAVPCIFG 1281
+LL+ ++ ++K G + + K N L+R I
Sbjct: 1477 ELRLLEAYSPKMKRIGIEYTLSGDSAMVTHLPACFVEKEANELKRGRQTI---------A 1527
Query: 1282 VNLSDVDLLEFLQQLADTDGS-STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEEL 1340
++++ + E L + G+ S+ P ++ R+LNS+AC GAI FGD+L EC ++ +L
Sbjct: 1528 TSMAETLIKEVLDSIQHQSGAVSSLPKTITRILNSQACHGAIKFGDTLDRDECKTLIGQL 1587
Query: 1341 KQTSLCFQCAHGRPTTVPLVNLEALHKQIAQ 1371
L FQCAHGRP +P+ + + + +++
Sbjct: 1588 SSCDLPFQCAHGRPALMPIFDFKKIKHGVSE 1618
>gi|291221411|ref|XP_002730726.1| PREDICTED: MutL protein homolog 1-like [Saccoglossus kowalevskii]
Length = 1476
Score = 197 bits (500), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 130/350 (37%), Positives = 194/350 (55%), Gaps = 16/350 (4%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDG 60
TI L + VR+ +RSG + LT+ VEELV NS+DA AT + V V + CY V V+D+G
Sbjct: 9 STIQPLSDEVRSRLRSGIAITSLTQCVEELVLNSIDANATCIAVRVDI-PCYKVHVIDNG 67
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHG 119
+GI+ + + L+G+R+ATSK ++ D+++ + +GFRGEALASI DV+ +LEI++KA
Sbjct: 68 TGITVEQMKLIGQRYATSKCHNIQDLEN---LSYYGFRGEALASICDVTGVLEIVSKAKS 124
Query: 120 RPNGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
Y K+ K K L + R GTT+ D FYN PVRRK M SP V++
Sbjct: 125 SNCTYCKLFKNGKPLEVFKAEKPRPSQGTTITVHDFFYNLPVRRKTM--SPVLEFERVRQ 182
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
C+ IAL+ P VS + + + L T S S L FG+ + E+ +
Sbjct: 183 CLEGIALMRPFVSLSLRNDYTGVKTLQTHKSDSILGTFGQLFGVGKARIMKEMQYSYNEF 242
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF--LK 296
I G+I + D + K Q++Y+N R + K +HK++N L + S K+ G +
Sbjct: 243 TIIGHIGT--DGHTNKNIQFIYVNGRLLLKTKLHKVVNVLLSK---SVIVKSRTGMCEIP 297
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
S P ++LN++CP S YD+ +P KT V FKDW+ +L +E I
Sbjct: 298 SPSRGSDLHPMFVLNIQCPLSEYDICLEPSKTLVEFKDWDGILLCLENFI 347
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 126/253 (49%), Gaps = 40/253 (15%)
Query: 1160 KSCLEDAKVLQQVDKKFIPVVAGGT--------LAVIDQHAADERIRLEELRHKV----- 1206
K+ L++ K+ QVD KFI + T L +IDQHAA ER+RLE+L V
Sbjct: 1225 KAMLDNIKMCGQVDDKFIACLVKTTDKTDEPNLLVLIDQHAAHERVRLEQLTADVYDDSK 1284
Query: 1207 -----LSGEGKSVAYLDAEQELVLP-EIGYQLLQNFAEQIKDWGW--------ICNIHTQ 1252
+S + +S + A ++ P EI ++++ F I+ G I IHT
Sbjct: 1285 DDEDPISRKIRSSRVIPAVTIILTPGEI--RIMEAFKSNIEKLGVTFNITGSDIIEIHTL 1342
Query: 1253 GSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGS-STTPPSVLR 1311
+ + +N ++R + L V + L E + L T G+ + P ++ +
Sbjct: 1343 PACLMEREVNEVKRGRQPVALSIVETL---------LKEHIDLLQKTSGACAVLPRTLTK 1393
Query: 1312 VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQI-A 1370
VLNS+AC GAI FGD+L EC ++ L L FQCAHGRP+ +P+++L+ L KQ+
Sbjct: 1394 VLNSQACHGAIKFGDALDHHECTSLIRSLSHCDLPFQCAHGRPSLMPIIDLDILRKQLDT 1453
Query: 1371 QLNNSSELWHGLH 1383
+ + +LW H
Sbjct: 1454 EKCSKPKLWKLKH 1466
>gi|168000047|ref|XP_001752728.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696259|gb|EDQ82599.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1067
Score = 194 bits (493), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 197/366 (53%), Gaps = 43/366 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
MG I RL AV + +RS TV+ + VEEL+ NS+DAGAT+V V VKV DDG
Sbjct: 1 MGRIGRLSAAVVSHLRSNTVVSSFEQAVEELICNSLDAGATQVRVQFDGGGASVKVEDDG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
G+SR+ L L+G RHATSKL L ++ A G+ T GFRGEAL+S+SD+S+LEI ++ G
Sbjct: 61 HGMSREDLELVGLRHATSKLHTLDEL--AAGVQTLGFRGEALSSLSDLSILEITSRVQGC 118
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQS------------- 167
P+ Y K+MK S + G+ + T+ RD+FYNQPVRR+ S
Sbjct: 119 PHTYCKIMKAS---FPGL----YRLHCTITLRDMFYNQPVRRRLFHSSQNAAFTFAVNLP 171
Query: 168 ---SPKKVLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIED 224
S +K+L SVK+ ++R+AL + V+F D +E L +S + L FG E
Sbjct: 172 WCCSSRKILQSVKERIVRLALAYFNVTFILTDSLRVEEELHIRRHTSLYSTLQDVFGREF 231
Query: 225 FSFLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDC 284
L E++ G L ++G++SS S+K F P H LLN + +
Sbjct: 232 CHGLKEIDFAKGKLRLTGFLSSTETYTSLKVF-----------TDPSH-LLNATPSGGEP 279
Query: 285 SDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIER 344
K + K A PA++LNL C S YD+TF+ KT+V FKDW P L F+E
Sbjct: 280 KRIEKLDTSLGKA------AYPAFVLNLSCELSEYDITFEATKTYVEFKDWTPALTFLEN 333
Query: 345 AIRSAW 350
+ +W
Sbjct: 334 VLCVSW 339
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/316 (37%), Positives = 160/316 (50%), Gaps = 65/316 (20%)
Query: 1130 CDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVID 1189
C N ++IL +S+ L + PD + K L+ A+VLQQVD KFI +VA L ++D
Sbjct: 767 CMRANTNDILHVSAVTLKSWSKSLQPDMVTKKSLQHARVLQQVDNKFIAIVAQNVLLLVD 826
Query: 1190 QHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGW-ICN 1248
Q A +G+ + LD + +L L Q L + +QI+DWGW C
Sbjct: 827 QVLA--------------AGKQQCSTLLDVKHDLSLGLGEQQTLHAYRQQIEDWGWRFCT 872
Query: 1249 IHTQGSRSFNK-NLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPP 1307
+RS ++ ++ + L AVPCI GVNL+ DL E+LQQL T G+S PP
Sbjct: 873 --ASDARSLDRTSIRGCDSTTCKLQLSAVPCILGVNLTASDLEEYLQQLGATQGASVPPP 930
Query: 1308 SVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF-------------------- 1347
+V+R+LN K+CRGAIMFGD LLP++C +V LK TSLCF
Sbjct: 931 AVIRLLNYKSCRGAIMFGDPLLPAQCRQLVSHLKHTSLCFQDYASSLAAFSSKATPMLCL 990
Query: 1348 ----------QCAHGRPTTVPLVNLEALHKQI-AQLNN----------------SSELWH 1380
QCAHGRPT VPLVNL+ L ++ +Q+ N S WH
Sbjct: 991 INDFCLFVTLQCAHGRPTMVPLVNLQILRQRTESQMTNDGFITTNTSRGNIPTASGACWH 1050
Query: 1381 GLHRGEISLKRASRRL 1396
L + +SL+RA RL
Sbjct: 1051 KLMKHPLSLERARERL 1066
>gi|327259325|ref|XP_003214488.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Anolis
carolinensis]
Length = 1404
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/358 (35%), Positives = 197/358 (55%), Gaps = 20/358 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LPE V+ T+RSG + L + EELVFNS+DA AT V V V + V+VVD+G G+
Sbjct: 2 IKCLPEEVQATLRSGVAISSLGQCAEELVFNSIDAKATCVAVRVDLETFKVQVVDNGCGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
R+ + +G R+ TSK G L D+++ + +GFRGEALASI+++ S+LEI +K
Sbjct: 62 GREDISKIGNRYFTSKCGSLEDLEN---LRFYGFRGEALASIANIASILEISSKTRKTAT 118
Query: 123 GYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ K L + + R GTTV +LFYN PVRRK M SS + L ++ +
Sbjct: 119 SFLKMFHNGKGLEVSETEMNRPCAGTTVTVYNLFYNLPVRRKCMNSSLE--LERMRHKIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
I+L+HP VSF + + +L + + + + L EV G EI
Sbjct: 177 AISLIHPSVSFSLRNDTACSMVLQLSKTKDLCSRFSQIYSLSKSQKLREVKYKSGGFEIY 236
Query: 242 GYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK- 298
G+IS+ Y+ K Q++Y+N+R + K +HKL++ L S K NG L+
Sbjct: 237 GFISTEGHYN----KNIQFLYVNNRLILKTRLHKLIDFLLRKQ--STICKTKNGSLQSSP 290
Query: 299 ---RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
RS S+A +++N++C + YD+ +P KT + F++W +L +E I+ A++K+
Sbjct: 291 ARHRSGSEAYGVFVINVKCQYDEYDVCLEPAKTLIEFRNWAALLTCVEEGIK-AFLKQ 347
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 127/269 (47%), Gaps = 54/269 (20%)
Query: 1152 FFIPDSINKSCLEDAKVLQQVDKKFIP-----------VVAGGTLAVIDQHAADERIRLE 1200
P K+ ++ +VL QVD KFI V+ G L ++DQHAA ER+RLE
Sbjct: 1139 IMYPYRFTKNMIDSMQVLNQVDNKFIACLINTDENEEAVLHGNLLVLVDQHAAHERVRLE 1198
Query: 1201 EL------RHKVLSGEGKSVA-YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1253
+L + SG K +A + E+ + E +LL+ + ++D G
Sbjct: 1199 QLITDSYEKQSETSGRKKLLASTVCPPLEIEITEDHRRLLRCCHKGLEDLGL-------- 1250
Query: 1254 SRSFNKNLNLLQRQITVITLLAVPCIF----------GVNLSDVDLL-EFLQQLAD---T 1299
L + Q + I + VP F G +++ EF+Q+ A+ T
Sbjct: 1251 ------ELFFPENQPSQILVGKVPLCFVEREANELRRGRQTVAKNIVQEFIQEQAELLQT 1304
Query: 1300 DGSS--TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1357
G + T P +VL+VL S+AC GAI F D+L +C ++E L L FQCAHGRP+ +
Sbjct: 1305 TGGAQGTLPLTVLKVLASQACHGAIKFNDNLTFEDCCRLMESLSCCQLPFQCAHGRPSML 1364
Query: 1358 PLVNLEALHKQ------IAQLNNSSELWH 1380
PL +++ LH++ +A+L + W
Sbjct: 1365 PLADVDHLHQESQPKPNLAKLRRMVKAWQ 1393
>gi|303278460|ref|XP_003058523.1| DNA mismatch repair enzyme [Micromonas pusilla CCMP1545]
gi|226459683|gb|EEH56978.1| DNA mismatch repair enzyme [Micromonas pusilla CCMP1545]
Length = 736
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 188/353 (53%), Gaps = 14/353 (3%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSG 62
+ +L +++ +RS TV+ + ++VEE V NS+DAGATKV V V + + V D+G G
Sbjct: 24 LRQLSPELQSKLRSCTVISSIGQLVEECVCNSIDAGATKVSVVVDTGSTLAITVSDNGRG 83
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + +G R+ TSK L D+ D I T GFRGEALAS+SD+S+LE+ ++A G
Sbjct: 84 MSVRDVRDVGRRYHTSKCHDLQDLSD--NIKTLGFRGEALASMSDLSVLEVTSRAAGSFE 141
Query: 123 GYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
Y ++ + L R GT + +RDLF+N PVRR ++ + +K L +
Sbjct: 142 TYTRISTKAGTATLACGPARYQLPKAGTVITARDLFHNHPVRRNMIRRNLQKQLEDARAR 201
Query: 180 VLRIALVHPKVSFKFIDMESE-DELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
V R+AL+HP V + EL+ S L+ L +FG S L V G
Sbjct: 202 VYRLALIHPAVGVSLTEFNGRRKELMRLPPGRSLLSALSDAFGSALASSLVPVGLTVGPF 261
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCS-DSWKANNGFLKG 297
GY++ +++ Q++Y+N R+V K P+HK + +F+ + D +++ G +
Sbjct: 262 RARGYVTPSNRALNSPEVQFLYVNRRFVKKTPLHKAVKD---AFNAARDPYESRRGPVT- 317
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
+ P Y+L L C S YD+T+D KT + F+DWE L + A+R AW
Sbjct: 318 --APPGGHPGYVLCLDCSPSEYDVTYDVEKTLIEFRDWEMPLRVLNEALREAW 368
Score = 124 bits (310), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPV-VAGGTLAVIDQHAADERIRLEELRHKVLS-GEGKSVA 1215
+ + LE+A VL Q KKF+ + A G L +DQHA+DER+RLE LR + + G+ +
Sbjct: 494 VTRESLENATVLTQWGKKFVLIRSASGDLFALDQHASDERVRLENLRRDLTARGDAVTSK 553
Query: 1216 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
L L L+ A WGW G ++L
Sbjct: 554 VLPHPVPCELSAAELATLRANASSAHRWGWRWEDDDAGGGG--------------VSLTG 599
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1335
P I G L L E+L+++A +S PP++ R+L SKACRGAIMFGD L EC
Sbjct: 600 TPAIEGTTLGGDALGEYLREIAAVGLTSAPPPALHRLLASKACRGAIMFGDMLRRRECVA 659
Query: 1336 IVEELKQTSLCFQCAHGRPTTVPLV 1360
++EEL++T L QCAHGRPT L
Sbjct: 660 LLEELRKTQLPLQCAHGRPTAALLA 684
>gi|340382915|ref|XP_003389963.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Amphimedon
queenslandica]
Length = 913
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/359 (35%), Positives = 194/359 (54%), Gaps = 25/359 (6%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRD 66
L E++R+ +RSG L L + VEELV NS+DAGAT++ V+V + + +KV D+G GI ++
Sbjct: 10 LSESLRSQIRSGLSLSSLVQCVEELVLNSIDAGATQITVHVDISHLLIKVFDNGVGIGKE 69
Query: 67 GLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPNGYR 125
++++GER+ATSK L D++D + ++G+RGEALAS+ + ++I ++ P Y
Sbjct: 70 DMMIIGERYATSKCHSLKDLED---LRSYGYRGEALASLIKICGKVDITSRQRLSPLTYT 126
Query: 126 KVMKGSKCLYL--GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRI 183
K L + GTTV D+F + PVRRK + S P + L +++ + I
Sbjct: 127 KSFHSGVAFPLKESLSSLHHKTGTTVALSDIFQSLPVRRKSL-SEPVE-LERIRRSLSAI 184
Query: 184 ALVHPKVSFKFID--MESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
AL+H VSF D + LL T + L+ FG E L EV+ + +S
Sbjct: 185 ALIHSSVSFSLHDGSFGNGRLLLQTKGTGGMLSAFSFLFGKEIAQSLREVSRIEAGYTVS 244
Query: 242 GYIS-SPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL-----------AASFDCSDSWK 289
GYIS SP+ S K+ Q +YIN R VCK +H +N L +A ++ S S
Sbjct: 245 GYISTSPHHS---KSIQMIYINKRLVCKTRLHSHVNKLLDNSLIAHCKDSAQYNRSQSKT 301
Query: 290 ANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
G + K S+ Y+LN++C + D+ DP K+ V FK W+ VL+ + A+RS
Sbjct: 302 RVGGDMSPKAVYSERFGVYVLNIQCSKTEVDIFMDPDKSLVEFKKWDKVLSVLSLAVRS 360
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 110/217 (50%), Gaps = 12/217 (5%)
Query: 1163 LEDAKVLQQVDKKFIPV------VAGGTLAVIDQHAADERIRLEELR---HKVLSGEGKS 1213
L+ KVL Q+D KFI + L + DQHAADER+RLE L + + +G KS
Sbjct: 676 LKHVKVLGQIDNKFIACTLKTEELKDDLLVLFDQHAADERVRLEALTEGIYDLATGNIKS 735
Query: 1214 VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITL 1273
V +D L L E+ +L +A ++K+ G + + L + + +
Sbjct: 736 V-RIDPSLTLKLNELDRRLALTYARELKNIGNRVKVSCKHEMLLVSELPAILTERDIGEK 794
Query: 1274 LAVPCIFGVNLSDVDL--LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPS 1331
+ + L ++L L+ + + G + P S+ +VL S AC GAI FGDSL
Sbjct: 795 QKIKLAQDLILKHLELFCLKTVSEKVRGGGGAMLPISLHKVLCSLACHGAIKFGDSLTVE 854
Query: 1332 ECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQ 1368
+C+ ++ L + L FQCAHGRP+ +P+VNL L K+
Sbjct: 855 QCSELIASLSKCKLPFQCAHGRPSLMPIVNLSLLEKR 891
>gi|156400212|ref|XP_001638894.1| predicted protein [Nematostella vectensis]
gi|156226018|gb|EDO46831.1| predicted protein [Nematostella vectensis]
Length = 337
Score = 180 bits (456), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 193/344 (56%), Gaps = 16/344 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L +R+ +RSG + LT+ ++ELV N++DAGA+ + V+V + + V+V D+GSGI
Sbjct: 2 IRHLDTGIRSHLRSGVAISTLTQAIDELVTNALDAGASCINVHVDIPSFRVQVSDNGSGI 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
++D L +LG+R+ TSK L+D+ + ++GFRGEALASI D+ +LEI+TK
Sbjct: 62 TKDNLEILGQRYCTSKCHSLSDLRK---LSSYGFRGEALASIRDICGVLEIVTKHSSSYK 118
Query: 123 GYRKVMKGSKCLYLGID-DERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
Y K+ + K L + R + GTTV D+F N PVRRK + S V++ +L
Sbjct: 119 TYCKLFRSGKPLTVTQSCFPRSNTGTTVTIHDIFSNLPVRRKLLSSVLD--FERVRQRLL 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
IAL+HP+VSF + + + L T S + FG L +V + ++S
Sbjct: 177 SIALIHPEVSFILFNDATFQKCLQTRKCLSVTSTFSQLFGNLKARSLKDVFSEHKHFKVS 236
Query: 242 GYIS-SPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASF--DCSDSWKANNGFLK 296
G+I P+ + K Q+VYINSR + K IHKLLN + +SF + N+ ++
Sbjct: 237 GHIGIEPHHN---KNLQFVYINSRLLLKTKIHKLLNSMLSKSSFIKQLPSNMSENDVPMR 293
Query: 297 GKRSKSQACPA-YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVL 339
+S A +++N+ CP +YD+ +P KT V F+DW+ VL
Sbjct: 294 SPPQRSSEKNAIFIINITCPLMVYDVILEPSKTLVEFQDWDGVL 337
>gi|443688702|gb|ELT91309.1| hypothetical protein CAPTEDRAFT_223782 [Capitella teleta]
Length = 1165
Score = 179 bits (455), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 188/352 (53%), Gaps = 15/352 (4%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRD 66
L ++ +RSG + T+ VEELV NS+DA + V V V V ++VVD+G GIS
Sbjct: 5 LSSELQQRIRSGVAITSFTQCVEELVLNSLDASCSCVAVRVDVPLGKIQVVDNGKGISHQ 64
Query: 67 GLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRPNGYR 125
L + R+ TSK H+A +D + +G+RGEALAS+ D+ LLE+ ++ G + Y
Sbjct: 65 DLQTVATRYCTSKC-HVA--EDLNNLVHYGYRGEALASVRDICFLLEVESRYRGNTDTYL 121
Query: 126 KVMK-GSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIA 184
K+ + GS R GTTV DLF+ VR+K + S + ++ + IA
Sbjct: 122 KIFRQGSPLPTTESLKHRPSQGTTVTVHDLFHKMAVRKKALNSVLE--FERLRHRMEAIA 179
Query: 185 LVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYI 244
L+HP VSF + + ++L T SSS L FG ++ ++ ++ +++GY+
Sbjct: 180 LIHPGVSFTLRNDATSSKVLQTHKSSSVLKAFGDLFGSSKERYMKSISCSEDDFKVNGYL 239
Query: 245 SSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF-----DCSDSWKANNGFLKGKR 299
S+ + S K Q+V+IN R V K IHKL++HL A +D K G L
Sbjct: 240 ST--EGHSNKNLQFVFINDRLVLKTKIHKLISHLVAKSGFLKQKSNDLPKREAGHLTDSP 297
Query: 300 SKSQACPA-YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
S++ A Y++N+ C + YD+TFDP KT V FK+W VL IE A+R +
Sbjct: 298 SRNVDRHAIYIINVSCTLTEYDITFDPAKTLVEFKNWPGVLKCIENAVRKLF 349
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 125/253 (49%), Gaps = 50/253 (19%)
Query: 1157 SINKSCLEDAKVLQQVDKKFIPVVA------GGTLAVIDQHAADERIRLEEL---RHKVL 1207
S K L+ +V+ QVD KFI + G + +IDQHAA ER+RLE+L H+
Sbjct: 924 SFTKDMLKSIEVINQVDGKFILCLMDTENQQGKCIVIIDQHAAHERVRLEQLIEDAHENN 983
Query: 1208 SGEGKSVAYLDAEQELVLP--EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQ 1265
S K + + LV+P + ++L + +Q+K G C +F+ +
Sbjct: 984 SDGTKCLKCMAVSPALVVPLTQHAIRVLSAYPKQLKRIGVEC--------TFDPS----- 1030
Query: 1266 RQITVITLLAVP-CI--------------FGVNLSDVDLLEFLQQLADTDGS-STTPPSV 1309
++ + +P C+ F + + L+E + L T G+ S P ++
Sbjct: 1031 ---DLVVVTGIPACVQSRDENEKRRGRSDFLLKFTRELLMEQVDILTATVGANSALPKAI 1087
Query: 1310 LRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQI 1369
L+VL +KAC GAI FGDS+ +EC +V L+ L FQCAHGRP+ +PLV+L K I
Sbjct: 1088 LQVLAAKACGGAIKFGDSISVNECERLVRGLQTCDLPFQCAHGRPSLIPLVDL----KTI 1143
Query: 1370 AQLNNSS---ELW 1379
AQ +S LW
Sbjct: 1144 AQPKTNSCHPNLW 1156
>gi|260836417|ref|XP_002613202.1| hypothetical protein BRAFLDRAFT_210470 [Branchiostoma floridae]
gi|229298587|gb|EEN69211.1| hypothetical protein BRAFLDRAFT_210470 [Branchiostoma floridae]
Length = 362
Score = 179 bits (455), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/364 (32%), Positives = 198/364 (54%), Gaps = 22/364 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L +VR +RSG + + + VEELV NS+DA AT V V + + N +++VVD+G GI
Sbjct: 2 IRTLDPSVRAQLRSGVSVPSVAQCVEELVLNSLDAAATCVAVRIDLENFWIQVVDNGHGI 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
+D L ++G+R+ATSK + D++ + FG+RGEALASI+ V ++LEI ++
Sbjct: 62 PKDQLSIVGDRYATSKCHTVTDLE---SLSFFGYRGEALASIAQVCAVLEIESRHKASTK 118
Query: 123 GYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
KV + K + + R GTTV ++F+N PVR+K++ S ++ +++ V
Sbjct: 119 VSTKVFRHGKVVSIFESKAHRPTYGTTVTVHNVFHNLPVRQKFVSVSLER--ERIRERVA 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
IAL+HP VSF + + L T ++S ++ S FG + L E + +IS
Sbjct: 177 AIALIHPSVSFTLRNENVGGKYLQTHKTNSLVSCFGSLFGTKKSMSLREASHQHEQFKIS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDC----SDSWKANNGFLKG 297
GYIS + K Q++YIN+R + + +HK LN L + + W+ ++
Sbjct: 237 GYISR--EGHRNKDLQFLYINNRLILRTKVHKFLNLLMSKSTVINRRAGQWEPRTPTVRD 294
Query: 298 KRSKSQACPA--------YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
+ + P ++LN+ CP S YD++ DP KT V FK+WE +L ++ ++
Sbjct: 295 NSATDASSPGKQRDYYGMFVLNISCPLSEYDISLDPAKTLVEFKEWEALLTCVQDMVQK- 353
Query: 350 WMKK 353
++KK
Sbjct: 354 FLKK 357
>gi|149566645|ref|XP_001516394.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Ornithorhynchus
anatinus]
Length = 973
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 191/358 (53%), Gaps = 16/358 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LPE VR +RSG + L + +EEL NS+DA A V V V V V+VVD+GSG+
Sbjct: 2 IRHLPEGVRAKLRSGVAIASLGQCIEELALNSIDAEANCVAVRVNVETFRVQVVDNGSGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRPN 122
++ + G+R+ TSK G + D+++ +GFRGEALASI+ ++ +E+ +KA G
Sbjct: 62 GKEDVRRAGDRYFTSKCGSVEDLENPK---FYGFRGEALASIAALANAVEVSSKAGGTAK 118
Query: 123 GYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K++ K L + D R GTTV + +LFY PVRRK M S + +++ +
Sbjct: 119 TFLKLIHAGKALDVCEADSVRPSAGTTVTAYNLFYQLPVRRKGMDS--RLEFERIRRRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP VSF + S +L + A +G+ L E+N G E
Sbjct: 177 ALSLMHPSVSFSLKNEASGATVLQLPKAKDVRARFCQIYGLGRAQKLKELNCQGGGFECR 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFL 295
GY+ + ++ + Q++++N R V + +HKL++ L S C + + +
Sbjct: 237 GYVGA--EAHYNRNMQFLFVNGRLVLRTRLHKLIDFLLRKESVICKPKGGPAGRPPSSSH 294
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
RS S+ Y++N+RC YD+ +P KT + F+DW+ +LA +E +R A +K+
Sbjct: 295 PRPRSASERHGVYVVNVRCHVGEYDVCMEPAKTLIEFRDWDALLACVEEGVR-ALLKR 351
>gi|320163753|gb|EFW40652.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 1219
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/428 (31%), Positives = 196/428 (45%), Gaps = 99/428 (23%)
Query: 15 VRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVLLGER 74
+RSG + L VEELV NS+DAGAT V V+V + C ++V+D+G+GI+ L +GER
Sbjct: 2 LRSGVSIPSLAACVEELVLNSIDAGATAVDVHVDLQLCRLRVLDNGAGIALRDLARVGER 61
Query: 75 HATSKL----------GHLADMDDATGIGT---FGFRGEALASISDVS-LLEIITKAHGR 120
HATSK G +A DDA + T +GFRGEALAS++D+S L+EI+T+
Sbjct: 62 HATSKFAAGSVSSAAGGVVAIEDDADLMQTLSYYGFRGEALASVADMSTLVEIVTRVDND 121
Query: 121 PNG-----YRKVMKGSKC-------------------LYLGIDD-ERKDVGTTVVSRDLF 155
G Y K+++ + ++G+ +R GT V LF
Sbjct: 122 NAGQSSETYFKLLRPTPSENRNPATQRSSEHEKPLPQYHVGVSAVKRVTAGTIVTVHGLF 181
Query: 156 YNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLAL 215
PVR+ M ++P L ++ V IAL +P V+ D + +L T +S L++
Sbjct: 182 ATMPVRQGVMLANPVLTLEHARRAVEAIALANPGVALSVHDDHNARRVLTTRRLTSALSV 241
Query: 216 LISSFGIEDFSFLDEV-----------------NANDGALEISGYISSPYDSISV----- 253
FG+E + V N A+ + ++P SI V
Sbjct: 242 FKLLFGVERVGVTENVDMSLSCEFSNLTTRSALNQPQAAVSETLAAAAPESSILVRSVTV 301
Query: 254 -----------------KAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG--F 294
K+ Q+ +IN R V HKL+N L W+ G F
Sbjct: 302 VDYSLRGFLCTEPQPGAKSMQFFFINRRRVLHTRFHKLVNQLM------RQWQGTRGPRF 355
Query: 295 L-------------KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF 341
+ RS +A A++LN+ CP LYD+TFDP KT V F DWE LA
Sbjct: 356 VSQTLPVGRDMHASNNSRSFDKASCAWVLNMTCPPGLYDITFDPAKTLVEFADWETPLAL 415
Query: 342 IERAIRSA 349
+E+AIR+A
Sbjct: 416 VEQAIRTA 423
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 109/256 (42%), Gaps = 62/256 (24%)
Query: 1168 VLQQVDKKFIPVVAGG-------------TLAVIDQHAADERIRLEELRHKVLS----GE 1210
VL QV+++F+ V+A G + +DQHAA ERIRLE +V G
Sbjct: 914 VLSQVERQFVVVLAPGDDQPSALSDDGNDLIFCVDQHAAHERIRLERFTREVYQSNDQGT 973
Query: 1211 GKS-------------VAYLDAEQELVLP------------EIGYQL--LQNFAEQIKDW 1243
G S +A AE L+ P IG + L++ AE
Sbjct: 974 GSSQVLKSETLKDPLRLAMTVAEARLLEPFRDNLEACGIRFRIGSNVNALEDNAECAVMI 1033
Query: 1244 GWICNIHTQGSRS-FNKNLNLLQRQI----------------TVITLLAVPCIFGVNLSD 1286
+ I + SR+ + ++ + Q+ TV +L + G+ +S
Sbjct: 1034 DAVPPIMLEASRAEYISGQHVSRFQLEKQARALVGGADDVAQTVSSLTQAAILHGL-IST 1092
Query: 1287 VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1346
+ QQ G+ P ++ L SKAC GAI FGD+L +C +V L +L
Sbjct: 1093 LVRSRIDQQCHTGGGAYDLPLTISSALASKACHGAIKFGDTLSIDQCKSLVNTLSDCTLP 1152
Query: 1347 FQCAHGRPTTVPLVNL 1362
FQCAHGRP+ PLV++
Sbjct: 1153 FQCAHGRPSIAPLVSV 1168
>gi|255076207|ref|XP_002501778.1| predicted protein [Micromonas sp. RCC299]
gi|226517042|gb|ACO63036.1| predicted protein [Micromonas sp. RCC299]
Length = 781
Score = 172 bits (437), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 190/376 (50%), Gaps = 42/376 (11%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGS 61
++ +LP + +RS T++ + ++VEELV NS+DAGA V V + + V V DDG
Sbjct: 47 SLRQLPPDLERKLRSSTIVTSVGQLVEELVCNSIDAGAHDVSVVIDTGSTLSVTVSDDGC 106
Query: 62 GIS-RDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
G+S +D ++ RH TSK+ ++D+ + + T GFRGEALASI++ +L++ T+A G
Sbjct: 107 GMSVKDVKLVATNRHHTSKIHSISDLGGS--LRTLGFRGEALASIAEFCVLQVTTRAAGS 164
Query: 121 PNGYRKVMKGSKCLYLGI------------------------DDERKDVGTTVVSRDLFY 156
+ K+ L L + ++ GT V +DLFY
Sbjct: 165 FETFSKICSKVGGLTLFVRTSHHVQNLTSRSPQGQTLSCGPARNQLTKAGTIVACKDLFY 224
Query: 157 NQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALL 216
PVRR ++ + K L + + R+AL+HP+V F D+ + ++L S L++L
Sbjct: 225 THPVRRGVIRRNIAKQLEDTRVRLYRLALIHPEVGFLLKDVGARHDVLRALPGRSLLSIL 284
Query: 217 ISSFGIEDFSFLDEVNANDGALEISGYISSPYDSISVKA--FQYVYINSRYVCKGPIHKL 274
+FG S L ++ G ++GY+++ S+ + Q+ Y+N R+V + +H
Sbjct: 285 SDAFGKFIASKLIPLSNIIGEFRLTGYVTAATSETSLPSSELQFFYVNRRFVRRTLLHNA 344
Query: 275 LNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD 334
++ A + C+ S + CP Y+L L CP YD+TFDP KT + F D
Sbjct: 345 VSK-AFALACAS-----------LDSTTHGCPGYVLCLECPPDAYDITFDPEKTLIEFTD 392
Query: 335 WEPVLAFIERAIRSAW 350
W+ L ++ A++ W
Sbjct: 393 WKTPLDLLKSALKQVW 408
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 110/216 (50%), Gaps = 24/216 (11%)
Query: 1158 INKSCLEDAKVLQQVDKKFI-PVVAGGTLAVIDQHAADERIRLEELRHKVLSG---EGKS 1213
I+++ L+DAKVL Q KKFI + A G L IDQHAADERI LE+LR ++ GK
Sbjct: 544 ISRNLLDDAKVLTQWGKKFILAMSASGDLLAIDQHAADERILLEQLRASLIRSVDHRGKL 603
Query: 1214 VAY----------LDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNL 1263
Y L Q +L +L+ + + WGW + N
Sbjct: 604 HTYSPASPMPTTVLGRSQPCLLTASELAILRANSSLVWSWGW----------RWEDVANC 653
Query: 1264 LQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIM 1323
+ L +P + G L L E+L+Q++ T +S PP++ R+L SKACR AIM
Sbjct: 654 DGDTDEGVKLTGLPTVEGTMLGADALAEYLRQVSVTGPTSAPPPALHRLLASKACRSAIM 713
Query: 1324 FGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1359
FGD+L EC ++ L +T L CAHGRPT+V L
Sbjct: 714 FGDNLGQDECVALLGSLTRTELPLHCAHGRPTSVML 749
>gi|393216106|gb|EJD01597.1| hypothetical protein FOMMEDRAFT_148054 [Fomitiporia mediterranea
MF3/22]
Length = 861
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 191/369 (51%), Gaps = 33/369 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I RL A R+ +RS +L L +++ ELV NS+DAGA + V V + V DDG+GI
Sbjct: 6 IERLDTATRSKIRSTQILTSLPQIISELVQNSLDAGAKSIDVGVHCADWMCWVGDDGTGI 65
Query: 64 SRDGLVLL-----GERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 118
S+DGL L+ G R+++SK +L ++ + TFGFRGEALAS +D+S +EI ++
Sbjct: 66 SKDGLSLIAQGMEGGRYSSSKSYNLTSLEH---VNTFGFRGEALASAADLSCIEISSRTS 122
Query: 119 GRPNGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+ ++KG + LY G + R+ GTTV RD+F++ P+RR SP + + V
Sbjct: 123 RSKECWSVILKGGEKLYEGPSLRWRRERAGTTVSIRDVFFSLPIRR-LSHPSPSRTIELV 181
Query: 177 KKCVLRIALVHPKVSFKFIDMESE-------DELLCTCSSSSPLALLISSFGIEDFSFLD 229
++ + ALV P VSF D E +L +SS +A FG +D
Sbjct: 182 RRELETFALVFPHVSFTLKDASKEYCGTIDKSRVLTIPKTSSSMATFRHLFGRALVEHVD 241
Query: 230 EVNANDGALEISGYIS---SPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSD 286
+ G++++ G+IS SP K++Q++Y+N + +H++++ +S
Sbjct: 242 TIYVQSGSMKLEGFISLVGSPS-----KSYQFLYVNRHILDSCELHRIIDKCFSSSTFGK 296
Query: 287 SWKANNGFLKGKR-------SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVL 339
+G L R KS+ P Y+LNL P D +P KT V F+D V
Sbjct: 297 HAYDESGELPSLRPGTRRSPRKSELRPVYVLNLTLPARNVDNCLEPSKTAVQFQDQNAVR 356
Query: 340 AFIERAIRS 348
+F+E+ I+S
Sbjct: 357 SFLEQTIQS 365
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 122/295 (41%), Gaps = 78/295 (26%)
Query: 1136 DNILDISSGLLHLTGEF-FIPDSINKSCLEDAKVLQQVDKKFIPVVAG------------ 1182
D +SG+L GE P ++ CLE +VL QVD KFI +
Sbjct: 555 DQTFSTTSGILAELGEASMFP--FSRECLEKLEVLGQVDFKFIACLIDEESHAPSSSDAE 612
Query: 1183 ---GT---------LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV----LP 1226
GT L ++DQHAADER+R+E + G YLD ++E V L
Sbjct: 613 GIPGTSERGSDVRMLVLVDQHAADERVRVERYLKSLCLG------YLDRDREGVERRALD 666
Query: 1227 EIGYQLLQNF-------AEQIKD----WGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
LL F +E+IK WG G R +N N ++ +
Sbjct: 667 PPVPTLLTKFERDRLLDSERIKRAFSAWGLDFVDAPTGDRMCEENDN--DEGYGLVHCNS 724
Query: 1276 VPCIFGVNLSDV---DLLEFL-------------------QQLADTDGSSTT------PP 1307
VP + L D DL E + Q ADTD S P
Sbjct: 725 VPEVVADKLLDGSQGDLRELVKGYLARLEAEGMDESQGPSQAAADTDEFSWLKALRHCPR 784
Query: 1308 SVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1362
+ ++NS+ACRGAIMF D L +C ++ +L +T+ FQCAHGRP+ V L +
Sbjct: 785 ELTELVNSRACRGAIMFNDRLSVEQCKRLLRQLSETAFPFQCAHGRPSVVALTTI 839
>gi|292627044|ref|XP_696739.3| PREDICTED: DNA mismatch repair protein Mlh3 [Danio rerio]
Length = 1164
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 187/368 (50%), Gaps = 36/368 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LP V+ +RSG +F L + VEEL+ NS+DAGAT V V + + C ++V+D+GSG+
Sbjct: 2 IKSLPINVQAQLRSGVAIFSLQQCVEELILNSIDAGATCVAVKIDIEACKLQVIDNGSGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRPN 122
+ + +G R+ TSK L D+D+ + +GFRGEA++SI ++ ++EI ++
Sbjct: 62 CLEDMEKVGLRYNTSKCSSLEDLDN---LHFYGFRGEAISSIVSLAEMVEISSRTKQSVK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
Y K + L R GTTV +LF+N PVRRK M P +++ V
Sbjct: 119 TYVKSFNETNALEVFEAQTVRPSAGTTVSVYNLFHNMPVRRKRMD--PVLETERIRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
I+L+HP VSF S ++ +SS + G+ L EVN +I+
Sbjct: 177 AISLMHPSVSFTVKKENSAHMMVQLSKTSSTYYRFVQIHGLNRAQKLGEVNYEHEQFQIT 236
Query: 242 GYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHL-------------AASFDCSD 286
G+I Y++ + Q++++N R + K IHK LN L S+ +
Sbjct: 237 GHIGREGHYNN----SLQFLFVNERLLLKTRIHKTLNCLLKRVSGAARQNNSPTSYPVTS 292
Query: 287 SWKANNGF-LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 345
S K G+ L G Y++N++C +S YD+ +P K+ + FKDW+ VL IE
Sbjct: 293 SPKQKGGYDLHG---------IYVINIKCHYSEYDICLEPAKSLIEFKDWDNVLICIEEG 343
Query: 346 IRSAWMKK 353
+++ K+
Sbjct: 344 VKAFLTKE 351
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVA------------- 1181
+D++SG L P K+ + +V+ QVDKKF+ +
Sbjct: 883 VDVTSGQAEGLAVKIHNILFPYRFTKNMIHTMRVINQVDKKFLACLINTAGQNTSESSTD 942
Query: 1182 -GGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQI 1240
G L ++DQHAA ER+RLE L ++ + ++ L + L N E+
Sbjct: 943 EGNLLVLVDQHAAHERVRLEGL----IADSYEDDPDTPGKKRLCSSRVTPPLEINVTEEE 998
Query: 1241 KDWGWICNIHTQG-SRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL---------- 1289
C QG R ++ + + + L ++P F + +L
Sbjct: 999 LRLLRSC----QGFLRGLALDVRFPKSESLSVFLESLPACF-IEKESTELRRGRRSDYLR 1053
Query: 1290 --LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1347
+E L+ G P +V VL S+AC GAI F D L EC +V L L F
Sbjct: 1054 EHIELLRSTGRVRG--ILPLTVHNVLASQACHGAIKFNDVLNKEECCSLVSSLSSCRLPF 1111
Query: 1348 QCAHGRPTTVPLVNLEALHKQ 1368
QCAHGRP+ VPL +L L +Q
Sbjct: 1112 QCAHGRPSIVPLADLHHLEEQ 1132
>gi|353409902|ref|NP_001238771.1| mutL homolog 3 [Xenopus (Silurana) tropicalis]
Length = 1284
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 191/358 (53%), Gaps = 18/358 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L E V++ +RSG + + + VEELV NS+DA +T + V + + ++VVD+GSG+
Sbjct: 2 IRCLKEEVQHKLRSGVTISSVGQCVEELVLNSIDALSTCIAVRIDLETVRIQVVDNGSGL 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
+ L LG R+ TSK L D+++ + GFRGEA+ASI+DV S++EI +K
Sbjct: 62 CPEDLDRLGMRYFTSKCHSLNDLEN---LKFHGFRGEAIASIADVSSIVEISSKCKNTSK 118
Query: 123 GYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+++ K L + + R GTT +LFYN PVRRK M + + ++++ V
Sbjct: 119 TFYKLIQNGKLLSVQEANTSRPSAGTTFSVYNLFYNLPVRRKCMDQTVE--FENIRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + +L + + +G+ L E+ ++
Sbjct: 177 SLSLIHPSISFSLKNDAMHSVVLQLAKTKDVCSRFCQIYGLPRSQKLCEIQHKVREFDMW 236
Query: 242 GYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
GYIS Y+ K QY+Y+N+R V K +H+ ++ L K N
Sbjct: 237 GYISCEGHYN----KRMQYLYVNNRLVLKTKLHQHIDFLLRKESLICKPKNINVGKTSSP 292
Query: 300 SKSQACP----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+S++C +++N+ C +S YD+ F+P KT + FKDW+ VL F+E ++ A++K+
Sbjct: 293 GRSRSCQELYGIFIININCHYSEYDVCFEPAKTLIEFKDWDTVLRFVEEGVK-AFLKR 349
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 117/263 (44%), Gaps = 53/263 (20%)
Query: 1139 LDISSGLLHLTG----EFFIPDSINKSCLEDAKVLQQVDKKFIPVVA-----------GG 1183
+D+S G + P K + KVLQQVD KFI + G
Sbjct: 957 VDVSRGQTNTLAVKIHNILYPYRFTKEMMHSVKVLQQVDNKFIACLMNTKMKEGSEQDGN 1016
Query: 1184 TLAVIDQHAADERIRLEELRHKVL-------SGEGK-SVAYLDAEQELVLPEIGYQLLQN 1235
L ++DQHAA ER+RLE+L SG + ++ + EL + EI Y+LL+
Sbjct: 1017 LLVLVDQHAAHERVRLEQLIADSYESAPEDDSGRRQLKMSVISPPLELNVTEIQYRLLRV 1076
Query: 1236 FAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF-----------GVNL 1284
A + S+S +L+ Q + + AVP F +
Sbjct: 1077 LA--------------RSSQSIGLSLSFPDTQGPCVLVSAVPVCFVEREANELHRRRSTV 1122
Query: 1285 SDVDLLEFLQQLADT-----DGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1339
+ + EFLQ+ + T P +VL+VL S+AC GAI F D L +C +++
Sbjct: 1123 AKNLVQEFLQEQVELLQMTRRAGGTIPLTVLKVLASQACHGAIKFNDQLSLDDCKHLMQC 1182
Query: 1340 LKQTSLCFQCAHGRPTTVPLVNL 1362
L + SL FQCAHGRP +PL ++
Sbjct: 1183 LSRCSLPFQCAHGRPAILPLADM 1205
>gi|449274804|gb|EMC83882.1| DNA mismatch repair protein Mlh3 [Columba livia]
Length = 1440
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 183/353 (51%), Gaps = 16/353 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I RL E VR +RSG + + + VEELV NS+DA AT V + + ++VVD+GSG+
Sbjct: 2 IKRLVEDVRARLRSGVTISSVGQCVEELVLNSIDAKATCVAIRADLEAFKIQVVDNGSGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
R+ L +G+R+ TSK + D+++ T +GFRGEA+ASI+++ +++E+ +K
Sbjct: 62 GREDLNAMGKRYFTSKCSSVGDLENLT---FYGFRGEAVASIANMATVVEVSSKTSRTAK 118
Query: 123 GYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + L + + R GTTV +LFY PVR+K M P L V+ V
Sbjct: 119 TFVKLFHNGQALEVCEAELSRPSGGTTVTVCNLFYQLPVRKKRMD--PVLELERVRHKVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
I+L+HP VS + + +L + + +G+ L E+N G E+S
Sbjct: 177 AISLMHPSVSLSLRNDAAASMVLQLPKTRDIYSRFCQIYGLGRSQKLREINHKSGGFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGKR 299
GYIS + K Q++Y+N R V K IHKL++ L S C + G
Sbjct: 237 GYIS--IEGHYNKNMQFLYVNRRLVLKTRIHKLIDFLLRKESVICCKAKSGPVSRQAGAS 294
Query: 300 SKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ C ++LN+ C +S YD+ +P KT + F++W+ +L IE ++
Sbjct: 295 AGRYRCVPELYGIFILNVTCAYSDYDVCLEPAKTLIEFQNWDVLLTCIEEGVK 347
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 47/266 (17%)
Query: 1152 FFIPDSINKSCLEDAKVLQQVDKKFIPVVA-----------GGTLAVIDQHAADERIRLE 1200
P K + +VLQQVD KFI + G L ++DQHAA ERIRLE
Sbjct: 1178 ILYPYRFTKDMVHSMQVLQQVDNKFIACLINTRNEMDKKTDGNLLILVDQHAAHERIRLE 1237
Query: 1201 EL------RHKVLSGEGKSVA-YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1253
+L + G+ K ++ + E+ + E + L+ + ++D G +
Sbjct: 1238 QLIADSYDKEAAARGKKKLLSSAISPPLEIEVTEEQRRFLRCCYKNLEDLGLELSFPENS 1297
Query: 1254 SR----------SFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSS 1303
S S ++ N LQR+ +T + +L++ +L T G+
Sbjct: 1298 SSLILVRKVPLCSTERDANELQRKRQPVTKSVIE----------ELIQEQVELVQTTGAG 1347
Query: 1304 ---TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV 1360
T P + L++ S+AC GAI F + L E +++ L L FQCAHGRP+ +PL
Sbjct: 1348 ARGTLPLTFLKMFASQACHGAIKFNEHLTLEESCRLIKALSSCQLPFQCAHGRPSMMPLA 1407
Query: 1361 NLEALHKQ------IAQLNNSSELWH 1380
+++ L ++ +A+L + WH
Sbjct: 1408 DIDHLQQEKQPKPNLARLRKMARAWH 1433
>gi|431839136|gb|ELK01063.1| DNA mismatch repair protein Mlh3 [Pteropus alecto]
Length = 1418
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 201/395 (50%), Gaps = 28/395 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAICSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGV 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALASI+++ S +EI +K +
Sbjct: 62 GSDDVDKMGNRYFTSKCSSMQDLENPR---FYGFRGEALASIANMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQFPVRRKCM--DPRLEFEKVRQRID 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E+N E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLSKSQKLREINFKYKKFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK- 298
GYISS ++ K Q++++N R V K +HKL++ L S C K NG G+
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLKTKLHKLIDFLLRKESIIC----KPKNGSASGQM 290
Query: 299 ------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
RS + Y++N++C YD+ +P KT + F++W+ VL I+ I+ ++K
Sbjct: 291 NSSPRLRSNPELHGIYVINIQCQFCEYDVCMEPAKTLIEFQNWDTVLVCIQEGIK-MFLK 349
Query: 353 K----IAHDSFDV-DMLEDAELPLESSRFQSHQSS 382
K + D+ + ED + L S+ Q H+SS
Sbjct: 350 KEKLFVELSGEDIKEFSEDNDFSLFSTTLQKHESS 384
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 134/301 (44%), Gaps = 57/301 (18%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1122 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1181
Query: 1185 LAV-IDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDW 1243
L V +DQHAA ER+RLE+L ++ K ++L+ I L E+ +
Sbjct: 1182 LLVLVDQHAAHERVRLEQL---IIDSYEKQQPQGSGRKKLLSSTISPPLEITVTEEQRRL 1238
Query: 1244 GWICNIHTQGSRSFNKNLNLLQRQI-------TVITLLAVPCIF-------------GVN 1283
W ++KNL L I +++ + VP F V
Sbjct: 1239 LWC----------YHKNLEDLGLGIIFPDTSDSLVLVGKVPLCFVEREANEVRRGRSTVA 1288
Query: 1284 LSDVD--LLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEEL 1340
S V+ + E ++ L T G T P +V +VL S+AC GAI F D L EC ++E L
Sbjct: 1289 KSIVEEFIREQVELLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLEECYRLIEAL 1348
Query: 1341 KQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRASR 1394
L FQCAHGRP+ +PL +++ L ++ +A+L ++ WH + E R S+
Sbjct: 1349 SWCQLPFQCAHGRPSILPLADIDHLEQEKQIKPNLAKLRKMAQAWHLFGKAEGCDSRQSQ 1408
Query: 1395 R 1395
+
Sbjct: 1409 Q 1409
>gi|348531369|ref|XP_003453182.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Oreochromis
niloticus]
Length = 759
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 193/356 (54%), Gaps = 22/356 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LP+ V+ +RSG + L + VEEL+ NS+DAGAT V V + + ++V+D+G+G+
Sbjct: 2 IKCLPKEVQGKLRSGVAIPSLQQCVEELILNSIDAGATCVGVRMDMEAFKIQVIDNGAGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALAS-ISDVSLLEIITKAHGRPN 122
S + + +G R+ TSK +AD+D+ + +GFRGEALAS +S +L+EI ++
Sbjct: 62 SAEDMDCVGNRYHTSKCTSVADLDN---LRWYGFRGEALASLVSLATLVEISSRTRSSVK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQS--SPKKVLHSVKKC 179
+ K+ K K L + R GTTV+ + F+N PVRRK + + +++ H V
Sbjct: 119 THVKIFKEGKGLEVFEAEAARPSAGTTVIICNFFHNMPVRRKRVDAVLEGERIRHRVGA- 177
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
I+L+HP VSF + + ++ + + + + L E+N E
Sbjct: 178 ---ISLMHPSVSFTLKNDCTGAMMVQLPKARNTYHRFVQIHNLGQAEKLGEMNHTYKQFE 234
Query: 240 ISGYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLN----HLAASFDCSDSWKANNG 293
+ GYI Y++ + Q++Y+N R + K IHKLLN L +S +DS +
Sbjct: 235 VMGYIGREGHYNN----SLQFLYVNERLLLKTHIHKLLNVLLRRLTSSNQKNDSPDWQSV 290
Query: 294 FLKGKRSKSQAC-PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
F K +SQ Y++N++C +S YD++ +P KT + FKDW+ +L +E A+++
Sbjct: 291 FRSPKHKRSQDLYGVYIINIKCSYSEYDISLEPAKTLIEFKDWDGILLCVEEAVKA 346
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 1290 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1349
+E L G T P +VL+VL S AC GAI F D+L EC +V L L FQC
Sbjct: 659 IELLHSTGRVRG--TLPLTVLKVLASLACHGAIKFNDTLSRDECYSLVASLSACQLPFQC 716
Query: 1350 AHGRPTTVPLVNLEALHK 1367
AHGRP+ VPLV++ L K
Sbjct: 717 AHGRPSIVPLVDVLHLDK 734
>gi|405974291|gb|EKC38947.1| DNA mismatch repair protein Mlh3 [Crassostrea gigas]
Length = 1717
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 185/351 (52%), Gaps = 11/351 (3%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRD 66
L + +++ +R+G L ++ VEELV NS+DAGAT + V V + ++V D+G GI +D
Sbjct: 11 LTQDLQSLLRTGVALTSFSQCVEELVLNSIDAGATCIAVRVDMSCFKIQVFDNGHGIQKD 70
Query: 67 GLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRPNGYR 125
L + ER+ TSK + D+D+ + FG+RGEA+AS+ ++S +LEI+++ P Y
Sbjct: 71 DLETVAERYYTSKCHTVKDLDN---LCYFGYRGEAVASLREISAVLEIVSRTKFLPQSYC 127
Query: 126 KVMK-GSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIA 184
K+ + G + VGTT+ S +LFYN PVR+K+ + + V++ + IA
Sbjct: 128 KIFQNGDPLPVVESTVPPPSVGTTITSHNLFYNFPVRQKHTNQNLE--FEKVRQKLEAIA 185
Query: 185 LVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYI 244
LVH VS + S +L T ++S L+ S FG S L + A+ +I Y
Sbjct: 186 LVHCGVSISLRNDISGQVVLQTHKTNSLLSTFTSLFGAAKSSSLCAMEADTEHFKIKAYF 245
Query: 245 SSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKRSKS- 302
+ S K Q++Y+N R V K + K++N L S L+ +K
Sbjct: 246 GK--EGSSRKDHQFIYVNKRIVLKTEVSKIVNSILGKSLIVKAKTSYTKALLEDSPTKHV 303
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +++ L C S YD+TF+P KT V FK WE + +E ++S +K+
Sbjct: 304 DRYPIFVILLECAFSEYDITFEPAKTFVQFKHWESLKDSLENLVQSFLVKE 354
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 101/186 (54%), Gaps = 16/186 (8%)
Query: 1185 LAVIDQHAADERIRLEELRHKVL-SGEGKSV--AYLDAEQELVLPEIGYQLLQNFAEQIK 1241
L V DQHAA ER+RLE+ S EG+ L +EL L E ++++ F E+
Sbjct: 1522 LVVFDQHAAHERVRLEQFTKDCYESSEGRQFKSCILSPPEELKLTEEDVRVMEAFREEFS 1581
Query: 1242 DWGWICNIHTQGSRSFNKNLNLLQRQI-TVITLLAVPCIFGVNLSDVDLLEFLQQLADTD 1300
G IC +Q SR ++L ++I T IT V G+ + +++L+FL+ T
Sbjct: 1582 RIG-ICFSRSQLSRD-----SVLIKEIPTCITTKEVKQREGIVI--LNILKFLKS---TK 1630
Query: 1301 GSST-TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1359
G+ P ++ +++ ACRGAI FGD+L EC +++ L L FQCAHGRP+ +PL
Sbjct: 1631 GAKNHMPLTIHKLMCGLACRGAIKFGDALTREECGDLLQSLSLCDLPFQCAHGRPSVMPL 1690
Query: 1360 VNLEAL 1365
+ + L
Sbjct: 1691 IATDKL 1696
>gi|449504424|ref|XP_002199972.2| PREDICTED: DNA mismatch repair protein Mlh3 [Taeniopygia guttata]
Length = 1069
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 189/354 (53%), Gaps = 19/354 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I RL E VR +RS + L VEELV NS+DA AT V + V + ++VVD+GSG+
Sbjct: 2 IRRLVEDVRARLRSEVTVNSLGHCVEELVLNSIDAKATCVAIRVDLEAFKIQVVDNGSGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
++ L +G+R+ TSK + D+++ T +GFRGEALASI+++ S++EI +K
Sbjct: 62 GKEDLKAVGKRYFTSKCSSVRDLENLT---FYGFRGEALASIANMASVVEISSKTSRTAK 118
Query: 123 GYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + L + + R GTTV +LF+ PVRRK M P + V++ V
Sbjct: 119 TFMKLFHNGQALEVCEAELNRPSGGTTVTVCNLFHQLPVRRKCM--DPVLEIERVRQKVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP VS + S +L + + +G+ L E+N G EIS
Sbjct: 177 AVSLMHPSVSLSLRNDVSCSMVLQLPKTRDVYSRFCQIYGLGRSQKLREINHKSGGFEIS 236
Query: 242 GYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-SDSWKAN---NG 293
G+IS+ Y+ K Q++Y+N R V K +HKL++ L S C + S AN N
Sbjct: 237 GFISTEGHYN----KNMQFLYVNRRLVLKTRLHKLIDFLLRKESVICKAKSVPANRQANS 292
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS + ++LN+ C +S YD+ +P KT + F++W+ +L IE ++
Sbjct: 293 SPGRYRSGPELYGIFILNVTCAYSDYDVCLEPAKTLIEFQNWDVLLTCIEEGVK 346
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 125/287 (43%), Gaps = 59/287 (20%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVA-----------GG 1183
+D++SG L P K + +VLQQVD KFI + G
Sbjct: 791 VDVTSGQADSLAVKIHNILYPYRFTKDMVHSMQVLQQVDNKFIACLINTRNGMEKKADGN 850
Query: 1184 TLAVIDQHAADERIRLEEL------RHKVLSGEGKSVAY-LDAEQELVLPEIGYQLLQNF 1236
L ++DQHAA ERIRLE+L + G+ K ++ + E+ + E + L+
Sbjct: 851 LLILVDQHAAHERIRLEQLIADSYEKEAAACGKKKILSSSISPPLEIEVTEEQRRFLRCC 910
Query: 1237 AEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF-------------GVN 1283
+ ++D G L+ + ++I + VP F +
Sbjct: 911 YKNLEDLGL--------------ELSFPETNNSLILVRKVPMCFIEREANELRRKRQPIT 956
Query: 1284 LSDVDLL--EFLQQLADTDGSS--TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1339
S V+ L E ++ L T G + T P + L+VL S+AC GAI F + L E ++E
Sbjct: 957 KSIVEELIQEQVELLQTTRGGARGTLPLTFLKVLASQACHGAIKFNEHLTLEESCRLIEA 1016
Query: 1340 LKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWH 1380
L L FQCAHGRP+ +PL +++ L ++ + +L + W
Sbjct: 1017 LSSCKLPFQCAHGRPSMLPLADIDHLQQEKQPKPNLTRLRKMARAWQ 1063
>gi|157822465|ref|NP_001101513.1| DNA mismatch repair protein Mlh3 [Rattus norvegicus]
gi|149025195|gb|EDL81562.1| mutL homolog 3 (E. coli) (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1442
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 187/353 (52%), Gaps = 18/353 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG L L + VEEL NS+DA AT V + V + V+V+D+G G+
Sbjct: 2 IRCLSDEVQAKLRSGLALSSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
+ D + +G R+ TSK + D+++ T +GFRGEALASI+D+ S +EI +K
Sbjct: 62 AGDDVEKVGNRYFTSKCHSVRDLENPT---FYGFRGEALASIADMASAVEISSKKSTTLK 118
Query: 123 GYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 119 TFVKMFQNGKALAAREADLTRPSVGTTVTVYNLFYQFPVRRKSM--DPRLEFEKVRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E +
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMILQLPKTKDICSRFCQIYGLGKSQKLREIHYKYKEFEFN 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGF 294
GYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 237 GYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS- 293
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS S+ Y++N++CP YD+ +P KT + F++W+ VL ++ I+
Sbjct: 294 -PRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQNWDTVLICVQEGIK 345
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 127/293 (43%), Gaps = 59/293 (20%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1146 VDVSSGQAGSLAVKIHNVLYPYRFTKEMIHSVQVLQQVDNKFIACLMSSRTDGSGQAGGN 1205
Query: 1185 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L V +DQHAA ER+RLE+L R K+LS + + + + E
Sbjct: 1206 LLVLVDQHAAHERVRLEQLITDSYEKQAPQSAGRKKLLS------STIIPPLAITVSEEQ 1259
Query: 1230 YQLLQNFAEQIKDWGWICNIHTQGSRSF----------NKNLNLLQRQITVITLLAVPCI 1279
+LL+++ + ++D G S + N L+R + +T V +
Sbjct: 1260 RRLLRSYHKHLEDLGLELLFPDASDSSILVGKVPLCFVEREANELRRGRSPVTKSIVEEL 1319
Query: 1280 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1339
+ LE LQ G T P +V +VL S+AC GAI F D L E ++E
Sbjct: 1320 IR------EQLELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDRLSLEESCRLIEA 1371
Query: 1340 LKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1386
L L FQCAHGRP+ +PL +L+ L ++ + +L + WH + E
Sbjct: 1372 LSLCQLPFQCAHGRPSMLPLADLDHLEQEKQVKPNLTKLRKMAHAWHLFGKAE 1424
>gi|149025196|gb|EDL81563.1| mutL homolog 3 (E. coli) (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 1233
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 187/353 (52%), Gaps = 18/353 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG L L + VEEL NS+DA AT V + V + V+V+D+G G+
Sbjct: 2 IRCLSDEVQAKLRSGLALSSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
+ D + +G R+ TSK + D+++ T +GFRGEALASI+D+ S +EI +K
Sbjct: 62 AGDDVEKVGNRYFTSKCHSVRDLENPT---FYGFRGEALASIADMASAVEISSKKSTTLK 118
Query: 123 GYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 119 TFVKMFQNGKALAAREADLTRPSVGTTVTVYNLFYQFPVRRKSM--DPRLEFEKVRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E +
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMILQLPKTKDICSRFCQIYGLGKSQKLREIHYKYKEFEFN 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGF 294
GYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 237 GYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS- 293
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS S+ Y++N++CP YD+ +P KT + F++W+ VL ++ I+
Sbjct: 294 -PRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQNWDTVLICVQEGIK 345
Score = 47.8 bits (112), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 15/79 (18%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1114 VDVSSGQAGSLAVKIHNVLYPYRFTKEMIHSVQVLQQVDNKFIACLMSSRTDGSGQAGGN 1173
Query: 1185 LAV-IDQHAADERIRLEEL 1202
L V +DQHAA ER+RLE+L
Sbjct: 1174 LLVLVDQHAAHERVRLEQL 1192
>gi|330801903|ref|XP_003288962.1| hypothetical protein DICPUDRAFT_153264 [Dictyostelium purpureum]
gi|325080993|gb|EGC34526.1| hypothetical protein DICPUDRAFT_153264 [Dictyostelium purpureum]
Length = 1482
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 185/359 (51%), Gaps = 24/359 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I +L E V VRS V+ L + +EE+VFNS+DA AT + + + + N +V D+G GI
Sbjct: 20 IKKLEEDVSLKVRSSAVIVSLEQAIEEIVFNSIDAQATSIVISINLSNLTFEVKDNGFGI 79
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNG 123
+ +GE TSK+ L D+ + TFG+RGE+LAS+SDVS L+I++ ++ N
Sbjct: 80 NYGNFKTIGEHSCTSKINKLTDL---KSLSTFGYRGESLASLSDVSNLDIVSTSNN--NT 134
Query: 124 YRKVMKGSKCLYLGIDDERKDV-------GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+K KC D + + GT V RDLF N PVRR+ + K++ +
Sbjct: 135 VQKTFNFGKCEQFKTIDSQDSIHNKPISNGTVVKVRDLFKNFPVRRQNLFHPNLKLI--L 192
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA--- 233
KK + IAL P + F D +L T +S ++ +G E + L+ + +
Sbjct: 193 KKRIEIIALSFPNIRFSVYDETKSLNILKTPKDTSFMSYFKHFYGQEMANKLEFIVSEGF 252
Query: 234 -NDGALEISGYISSPYDS-ISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWK-- 289
N+ + +SGY+SSP K+FQY Y+N+R V +H+ +N L F ++ +
Sbjct: 253 PNEKSFYLSGYVSSPQKKGHPNKSFQYFYLNNRIVLNTKLHRHINQLYHKFRLFNATRRA 312
Query: 290 -ANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDP-LKTHVVFKDWEPVLAFIERAI 346
AN + K+ + P ++L L+C Y+ +++P KT + F DW+ L I+ I
Sbjct: 313 HANTSKI-PKKEVIDSNPIFILFLKCSQLEYERSYEPSSKTFLEFNDWKKPLGEIQNVI 370
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 110/213 (51%), Gaps = 22/213 (10%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1217
I + L+D K + Q DKKF+ A G + V+DQHA ERI+LE L K + +
Sbjct: 1272 IPREMLKDFKFITQWDKKFLVCEANGIVLVLDQHAVSERIKLETLEKKYFGENKFDLCPM 1331
Query: 1218 DAEQELVLPEIGYQLLQNFAEQIKDWG--WICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
L +L++ +++ ++DWG W N T IT+L
Sbjct: 1332 PERSRWSLTAYELELMKIYSKNLEDWGFEWRSNP-------------------TSITILQ 1372
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGS-STTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1334
VP V L DL EFL L + GS ST PP+ R+L SKACR AI FG +L C
Sbjct: 1373 VPMFCLVGLGVNDLREFLYLLENNKGSPSTKPPAAHRILASKACRTAIKFGHNLTKEVCI 1432
Query: 1335 LIVEELKQTSLCFQCAHGRPTTVPLVNLEALHK 1367
++E+L + ++ FQCAHGRP+ +PL+N +L K
Sbjct: 1433 KLLEDLNECNIPFQCAHGRPSIIPLINYSSLFK 1465
>gi|410898385|ref|XP_003962678.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Takifugu
rubripes]
Length = 791
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 188/355 (52%), Gaps = 22/355 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LP V+ +RSG + L + VEEL+ NS+DA AT V V + + V+V+D+G+G+
Sbjct: 5 IKCLPVEVQGKLRSGVTIPSLQQCVEELILNSIDAEATCVGVRMDMEAFKVQVIDNGNGM 64
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALAS-ISDVSLLEIITKAHGRPN 122
D + +G R+ TSK + D+D+ + +GFRGEALAS +S +L+EI ++
Sbjct: 65 DADSMDCVGNRYHTSKCYRVEDLDN---LSWYGFRGEALASLVSLATLVEISSRTKSSLK 121
Query: 123 GYRKVMK-GSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQS--SPKKVLHSVKKC 179
+ K+ K G + R GTTVV + FYN PVRRK + +++ H V+
Sbjct: 122 THVKIFKDGKGTEVYEAEKSRPSAGTTVVLCNFFYNMPVRRKRLDPVLEGERIRHRVEA- 180
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
I+L+HP VSF + + L+ + + + G+ L EVN G
Sbjct: 181 ---ISLMHPSVSFTLKNDCTATMLVQLPKAKNTYHRFVQIHGLHRAQKLGEVNITHGRFS 237
Query: 240 ISGYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHL----AASFDCSDSWKANNG 293
+ G+I Y++ S Q++Y+N R + K IHKL+N L + + ++ G
Sbjct: 238 VVGHIGREGHYNNCS----QFLYVNERLLLKTRIHKLINFLLRKPSTNQKNDGGEQSVVG 293
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
K KRS+ + Y+LN++C S YD++ +P KT + FKDW+ VL +E A++S
Sbjct: 294 SPKNKRSQ-ELHGVYVLNIKCCCSEYDISLEPAKTLIEFKDWDGVLTCVEEAVKS 347
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 1139 LDIS----SGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFI--------------PVV 1180
LDIS GL P +K+ + KV+ QVDKKF+ P
Sbjct: 512 LDISRQQADGLTVKIHNVLYPYRFSKAMIHSMKVIHQVDKKFLACLISTKDSQTTDSPDS 571
Query: 1181 AGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQI 1240
G L ++DQHAA ER+RLE L + + +LP + + + E++
Sbjct: 572 EGNLLVLVDQHAAHERVRLENLIADSYEDDPAAPGERRLCSSSILPPLEISVTE---EEL 628
Query: 1241 KDWGWICNIHTQGSRSFNKNLNLLQRQITV-------ITLLAVPCIFG-----------V 1282
+ + RSF +L L ++ I + VP F +
Sbjct: 629 RLF-----------RSFQPHLQRLGLEVKFPQAEEPQILVGKVPVCFTEKESNELRRGRL 677
Query: 1283 NLSDVDLLEFLQQLADTDGSS-----TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1337
++ + E+LQ+ D S+ T P +VL+VL S AC GAI F DSL EC +V
Sbjct: 678 SVIRPIVEEYLQEQLDLLRSTGRVRGTLPLTVLKVLASLACHGAIKFNDSLSKDECHSLV 737
Query: 1338 EELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLNNSSEL 1378
L L FQCAHGRP+ PLV++ L K L N +L
Sbjct: 738 ASLSSCQLPFQCAHGRPSIAPLVDILHLDKDQKVLPNLQKL 778
>gi|353409903|ref|NP_001085796.2| mutL homolog 3 [Xenopus laevis]
Length = 1305
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 203/389 (52%), Gaps = 18/389 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L E VR +RSG + + + VEELV NS+DA +T + V + + ++VVD+G G+
Sbjct: 2 IRCLKEEVRYRLRSGVTINSVGQCVEELVLNSIDALSTCIAVRIDLETVRIQVVDNGCGL 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
++ + LG R+ TSK L D+++ + GFRGEA+ASI++V S++E+ +K
Sbjct: 62 CQEDMDSLGMRYYTSKCHSLNDLEN---LKFHGFRGEAIASIANVSSIVEVSSKCKNASK 118
Query: 123 GYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+++ K L + D R GTT +LFYN PVRRK M + + ++++ V
Sbjct: 119 TFYKLIQNGKLLSVQEADTSRPSAGTTFSVYNLFYNLPVRRKCMDQTVE--FENIRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP VSF + +L + + +G+ L E+ ++
Sbjct: 177 SLSLIHPSVSFSLKNDSMHSVVLQLAKTKDVRSRFCQIYGLPRSQKLCEIQHKVKEFDMW 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
GYIS ++ K QY+Y+N R V K +H+L++ L K N +
Sbjct: 237 GYISC--EAHYNKRMQYLYVNKRLVLKTKLHQLIDFLLRKESSICKPKNINVGKSSSPGR 294
Query: 302 SQACP----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
S++C +++N+ C +S YD+ F+P KT + FKDW+ VL +E R A++K+ +
Sbjct: 295 SRSCQELHGIFVINIYCHYSEYDVCFEPAKTLIEFKDWDTVLHCVEEGTR-AFLKR---E 350
Query: 358 SFDVDML-EDAELPLESSRFQSHQSSTHL 385
V+ L EDA ++S+ F S S L
Sbjct: 351 KLYVEPLKEDALGSVDSNNFISSCSDFQL 379
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 146/331 (44%), Gaps = 72/331 (21%)
Query: 1073 KIESSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSIISGTKWRN----GHPQTTNNNI 1128
K++ STI + T A N +C + + S+ S KW N HP +
Sbjct: 950 KVDGSTICTKDLTTTAVNI---VCNNDNDTESGNLKSLFS--KWENPVYARHPV-----V 999
Query: 1129 SCDI-HNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVA------ 1181
+ D+ Q N L + +H P K + KVLQQVD KFI +
Sbjct: 1000 AVDVSRGQTNTLAVK---IH---NILYPYRFTKEMMHSVKVLQQVDNKFIACLMSTEMKV 1053
Query: 1182 -----GGTLAVIDQHAADERIRLEEL-RHKVLSG----EGK---SVAYLDAEQELVLPEI 1228
G L ++DQHAA ER+RLE+L SG G+ + + EL + E+
Sbjct: 1054 GSEQDGNLLVLVDQHAAHERVRLEQLIADSYESGPEDDAGRRQLKTSIISPPLELNVTEM 1113
Query: 1229 GYQLLQNFAEQIKDWGWICNI-HTQGSRSFNKNLNLLQRQITVITLLAVPCIF------- 1280
Y+LL+ A ++ G + T G+R + + AVP F
Sbjct: 1114 QYRLLRVLARSSQNIGLSLSFPDTPGTR---------------VLVSAVPVCFVEREANE 1158
Query: 1281 ---GVNLSDVDLL-EFLQQLADT-----DGSSTTPPSVLRVLNSKACRGAIMFGDSLLPS 1331
G + +L+ EFLQ+ + S T P +VL+VL S+AC GA+ F D L
Sbjct: 1159 IHRGRSTVAKNLVQEFLQEQVELLQMTGRASGTIPLTVLKVLASQACHGAVKFNDKLSLD 1218
Query: 1332 ECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1362
+C +++ L + SL FQCAHGRP +PL ++
Sbjct: 1219 DCKHLMQCLSRCSLPFQCAHGRPAILPLADI 1249
>gi|47230202|emb|CAG10616.1| unnamed protein product [Tetraodon nigroviridis]
Length = 359
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 192/355 (54%), Gaps = 22/355 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LP V+ +RSG + L + VEEL+ NS+DA AT V V + + V+V+D+G+G+
Sbjct: 1 IKCLPTEVQGKLRSGVAIPSLQQCVEELILNSIDAEATCVGVRMDLEAFKVQVLDNGTGM 60
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALAS-ISDVSLLEIITKAHGRPN 122
D L LG R+ TSK + D+++ + +GFRGEALAS +S +L+E+ ++
Sbjct: 61 DADNLERLGNRYHTSKCRRVEDLEN---LRWYGFRGEALASLVSLATLVEVSSRTKSSLK 117
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQS--SPKKVLHSVKKC 179
Y KV K K + ++ R GTTVV + F+N PVRRK ++ ++V H V+
Sbjct: 118 TYVKVFKDGKGMAVFEAENPRPSAGTTVVICNFFHNMPVRRKRLEPVLEGERVRHRVEA- 176
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
I+L+HP VSF + + L+ ++S + + L E+N
Sbjct: 177 ---ISLMHPSVSFTLKNDCTAAMLVQLPKANSIYHRFVQIHSLSRAQNLGEINFTHQQFS 233
Query: 240 ISGYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHL----AASFDCSDSWKANNG 293
+ GY+ Y++ Q++Y+N R + K +HKL+N L ++ +DS + + G
Sbjct: 234 VVGYVGREGHYNN----CLQFLYVNERLLLKTRVHKLINCLLRKPSSINQKNDSPERSVG 289
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
K KRS+ Y+LN++C +S YD+ +P KT + FKDW+ V+A +E A+++
Sbjct: 290 SPKHKRSQDLH-GVYILNIKCCYSEYDVCLEPAKTLIEFKDWDGVMACVEEAVKT 343
>gi|149737526|ref|XP_001490730.1| PREDICTED: DNA mismatch repair protein Mlh3 [Equus caballus]
Length = 1453
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 199/395 (50%), Gaps = 28/395 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I RL V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKRLSVEVQAKLRSGLAICSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK L D+++ + +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRYFTSKCSSLQDLEN---LRFYGFRGEALASIADMASAVEISSKKNKTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L + R GTTV +LFY PVRRK M P+ V++ V
Sbjct: 119 TFVKLFQNGKALKACEAELSRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E+N E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREINFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK- 298
GYISS ++ K Q++++N R + + +HKL++ L S C K NG +
Sbjct: 237 GYISS--EAHYNKNMQFLFVNRRLILRTKLHKLIDFLLRKESIIC----KPKNGSASRQM 290
Query: 299 ------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
RS + Y++N++C YD+ DP KT + F++W+ L ++ ++ ++K
Sbjct: 291 TSNPRYRSNPELHGIYVINMQCQFCEYDVCMDPAKTLIEFQNWDTPLVCVQEGVK-MFLK 349
Query: 353 K----IAHDSFDV-DMLEDAELPLESSRFQSHQSS 382
K + D+ + ED + ++ Q H SS
Sbjct: 350 KEKLFVELSGEDIKEFSEDNDFSFFNATLQKHVSS 384
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 126/287 (43%), Gaps = 59/287 (20%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
LD+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1157 LDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1216
Query: 1185 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L V +DQHAA ER+RLE+L R K+LS + + E+ + E
Sbjct: 1217 LLVLVDQHAAHERVRLEQLIIDSYEKQQPQGSGRKKLLS------STISPPLEISVTEEQ 1270
Query: 1230 YQLLQNFAEQIKDWGW-ICNIHTQGSRSF---------NKNLNLLQRQITVITLLAVPCI 1279
+LL+ + ++D G I T S + N L+R +T V
Sbjct: 1271 RRLLRCYHNSLEDLGLEILFPDTSDSLVLVGKVPLCFAEREANELRRGRATVTKSIVEEF 1330
Query: 1280 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1339
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E
Sbjct: 1331 IR------EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLEESCRLIEA 1382
Query: 1340 LKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWH 1380
L L FQCAHGRP+ +PL +++ L ++ +A+L ++ WH
Sbjct: 1383 LSWCQLPFQCAHGRPSMLPLADMDHLEQEKQVKPNLARLCRMAQAWH 1429
>gi|124249062|ref|NP_780546.1| DNA mismatch repair protein Mlh3 [Mus musculus]
gi|51259774|gb|AAH79861.1| MutL homolog 3 (E coli) [Mus musculus]
Length = 1411
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 185/353 (52%), Gaps = 18/353 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L + VEEL NS+DA AT V + V + V+V+D+G G+
Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRPN 122
+ D + +G R+ TSK + D+++ +GFRGEALASI+D++ +EI +K +
Sbjct: 62 AGDDVEKVGNRYFTSKCHSVRDLENP---AFYGFRGEALASIADMAGAVEISSKKNTTLK 118
Query: 123 GYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 119 TFVKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSM--DPRLEFEKVRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E+ E S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEFS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGF 294
GYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 237 GYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS- 293
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS S+ Y++N++CP YD+ +P KT + F+ W+ VL I+ ++
Sbjct: 294 -PRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQSWDTVLICIQEGVK 345
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 133/309 (43%), Gaps = 75/309 (24%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV-----------AGG 1183
+D+SSG L P K + KVLQQVD KFI + G
Sbjct: 1120 VDVSSGQAESLAVKIHNVLYPYRFTKEMIHSVKVLQQVDNKFIACLMSTRMDEDGRTGGN 1179
Query: 1184 TLAVIDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L ++DQHAA ERIRLE+L R K+LS + + + + E
Sbjct: 1180 LLVLVDQHAAHERIRLEQLITDSYEKQDPQSAGRKKLLS------STIIPPLAITVSEEQ 1233
Query: 1230 YQLLQNFAEQIKDWGW------------------ICNIHTQGSRSFNKNLNLLQRQITVI 1271
+LL+++ + ++D G +C + + S L+R + +
Sbjct: 1234 RRLLRSYHKHLEDLGLELLFPDASDSLILVGKVPLCFVEREASE--------LRRGRSTV 1285
Query: 1272 TLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPS 1331
T V + + +E LQ G T P +V +VL S+AC GAI F D L
Sbjct: 1286 TKSIVEELIR------EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDRLSLE 1337
Query: 1332 ECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRG 1385
E ++E L + L FQCAHGRP+ +PL +L+ L ++ +A+L WH +
Sbjct: 1338 ESCRLIEALSLSQLPFQCAHGRPSMLPLADLDHLEQEKQVKPNLAKLRKMVRAWHLFGKT 1397
Query: 1386 EISLKRASR 1394
E +L++ R
Sbjct: 1398 EQNLQQPIR 1406
>gi|148670913|gb|EDL02860.1| mCG5531, isoform CRA_b [Mus musculus]
Length = 1443
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 185/353 (52%), Gaps = 18/353 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L + VEEL NS+DA AT V + V + V+V+D+G G+
Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRPN 122
+ D + +G R+ TSK + D+++ +GFRGEALASI+D++ +EI +K +
Sbjct: 62 AGDDVEKVGNRYFTSKCHSVRDLENP---AFYGFRGEALASIADMAGAVEISSKKNTTLK 118
Query: 123 GYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 119 TFVKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSM--DPRLEFEKVRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E+ E S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEFS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGF 294
GYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 237 GYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS- 293
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS S+ Y++N++CP YD+ +P KT + F+ W+ VL I+ ++
Sbjct: 294 -PRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQSWDTVLICIQEGVK 345
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 133/309 (43%), Gaps = 75/309 (24%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV-----------AGG 1183
+D+SSG L P K + KVLQQVD KFI + G
Sbjct: 1152 VDVSSGQAESLAVKIHNVLYPYRFTKEMIHSVKVLQQVDNKFIACLMSTRMDEDGRTGGN 1211
Query: 1184 TLAVIDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L ++DQHAA ERIRLE+L R K+LS + + + + E
Sbjct: 1212 LLVLVDQHAAHERIRLEQLITDSYEKQDPQSAGRKKLLS------STIIPPLAITVSEEQ 1265
Query: 1230 YQLLQNFAEQIKDWGW------------------ICNIHTQGSRSFNKNLNLLQRQITVI 1271
+LL+++ + ++D G +C + + S L+R + +
Sbjct: 1266 RRLLRSYHKHLEDLGLELLFPDASDSLILVGKVPLCFVEREASE--------LRRGRSTV 1317
Query: 1272 TLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPS 1331
T V + + +E LQ G T P +V +VL S+AC GAI F D L
Sbjct: 1318 TKSIVEELIR------EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDRLSLE 1369
Query: 1332 ECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRG 1385
E ++E L + L FQCAHGRP+ +PL +L+ L ++ +A+L WH +
Sbjct: 1370 ESCRLIEALSLSQLPFQCAHGRPSMLPLADLDHLEQEKQVKPNLAKLRKMVRAWHLFGKT 1429
Query: 1386 EISLKRASR 1394
E +L++ R
Sbjct: 1430 EQNLQQPIR 1438
>gi|126282671|ref|XP_001375015.1| PREDICTED: DNA mismatch repair protein Mlh3 [Monodelphis domestica]
Length = 1453
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 187/353 (52%), Gaps = 15/353 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L E V+ +RSG + L++ +EEL NS+DA A V V + + V+V+D+GSG+
Sbjct: 2 IKCLSEEVQVKLRSGVAIGSLSQCIEELALNSIDADAKCVAVRINMETFKVQVIDNGSGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
RD + +G+++ TSK + D+++ +GFRGEAL+SI+++ S +EI +K +
Sbjct: 62 ERDDIERVGKQYFTSKCKSVQDLENPK---FYGFRGEALSSIANMASAVEISSKTNRTVK 118
Query: 123 GYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L + + R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFMKLFQNGKTLEVCEAEVTRPSSGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E+ E+S
Sbjct: 177 ALSLMHPSISFSLRNDISGSMVLQLPKTKDTCSRFCQIYGLGKSQKLREIKFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC--SDSWKANNGFLKG 297
GYISS ++ K Q++++N R V + +HKL++ L S C S+ + L
Sbjct: 237 GYISS--EAHYNKNLQFLFVNKRLVLRTRLHKLIDFLLRKESIICRPKGSFASKQMSLSP 294
Query: 298 KRSKS--QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
R +S + Y+LN++C YD+ DP KT + FK+W+ +L + I++
Sbjct: 295 PRHRSNPELYGIYVLNVKCQFCEYDVCLDPAKTLIEFKNWDTILVCFQEGIKT 347
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 122/273 (44%), Gaps = 48/273 (17%)
Query: 1152 FFIPDSINKSCLEDAKVLQQVDKKFIPVV-----------AGGTLAVIDQHAADERIRLE 1200
P K + +VLQQVD KFI + G L ++DQHAA ERIRLE
Sbjct: 1182 ILYPYRFTKEMVHSMQVLQQVDNKFIACLMSTKQEENGKTGGNLLVLVDQHAAHERIRLE 1241
Query: 1201 EL--------------RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWI 1246
+L R K+LS S Y E+ + E +LL+ + + ++ G
Sbjct: 1242 QLIYDSYEKEQPKSFRRKKLLS----STIY--PPMEVTVTEEQRRLLECYHKGLEGLGLK 1295
Query: 1247 CNIHTQGSRSF----NKNLNLLQRQITVITLLAVPCIFGVNLSDV--DLLEFLQQLADTD 1300
I + S L ++R+ + P + L + + +E LQ
Sbjct: 1296 L-IFPDATSSHVLVEKVPLCFVEREANEVRR-GRPTVTKSMLEEFIREQVELLQTTGGAQ 1353
Query: 1301 GSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV 1360
G T P ++ +VL S+AC GAI F DSL E ++E L Q L FQCAHGRP+ +PL
Sbjct: 1354 G--TLPLAIQKVLASQACHGAIKFNDSLSLRESRRLIEALSQCQLPFQCAHGRPSMLPLA 1411
Query: 1361 NLEALHKQ-------IAQLNNSSELWHGLHRGE 1386
+++ L ++ +A+L + WH + E
Sbjct: 1412 DIDHLEQEKQNPKPNLAKLCRMARAWHLFKKVE 1444
>gi|344274036|ref|XP_003408824.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 1 [Loxodonta
africana]
Length = 1448
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 209/424 (49%), Gaps = 45/424 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSDEVQAKLRSGLAINSLGQCVEELTLNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRYFTSKCNSVQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALEACEADLTRPSVGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E+ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGRSQKLREIKFKYREFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK- 298
GYISS ++ K Q++++N R V + +HKL++ L S C K NG +
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIIC----KPKNGSASRQM 290
Query: 299 ------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
RS + Y++N++C S YD+ +P KT + F++W+ +L I+ +++ +
Sbjct: 291 NSCPRHRSNPELHGIYIMNVQCQFSEYDVCMEPAKTLIEFQNWDTLLVCIQEGVKTFLKQ 350
Query: 353 K---IAHDSFDV-DMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERI 408
+ + D+ + ED + L + Q H SS ++C+++
Sbjct: 351 EKLFVELSGEDIKEFSEDNDFSLLGTALQKHMSS-------------------DEKCDQV 391
Query: 409 TFQE 412
+FQE
Sbjct: 392 SFQE 395
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 123/277 (44%), Gaps = 57/277 (20%)
Query: 1152 FFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGTLAV-IDQHAADERIRLE 1200
P K + +VLQQVD KFI + AGG L V +DQHAA ER+RLE
Sbjct: 1169 ILYPYRFTKEMIHSMQVLQQVDNKFIVCLMSTKTEENGEAGGNLLVLVDQHAAHERVRLE 1228
Query: 1201 EL--------------RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWI 1246
+L R K+LS + + E+ + E +LL + + ++D G +
Sbjct: 1229 QLIIDSYEKQQPQGSGRKKLLS------STISPPLEITVTEEQRRLLWCYHKNLEDLG-L 1281
Query: 1247 CNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQ 1295
I S S + N L+R + +T V + +E LQ
Sbjct: 1282 EFIFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR------EQVELLQA 1335
Query: 1296 LADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1355
G T P +V +VL S+AC GAI F D L +E ++E L + L FQCAHGRP+
Sbjct: 1336 TGSIQG--TLPLTVQKVLASQACHGAIKFNDGLSLAESHRLIEALSRCQLPFQCAHGRPS 1393
Query: 1356 TVPLVNLEAL--HKQI----AQLNNSSELWHGLHRGE 1386
+PL + + L KQI A+L ++ W + E
Sbjct: 1394 MLPLADTDHLDQEKQIKPNLAKLRKMAQAWSFFGKAE 1430
>gi|410962673|ref|XP_003987893.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 2 [Felis catus]
Length = 1435
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 196/388 (50%), Gaps = 28/388 (7%)
Query: 11 VRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVL 70
V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+ RD +
Sbjct: 9 VQARLRSGLAICSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGMGRDDIDK 68
Query: 71 LGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPNGYRKVMK 129
+G R+ TSK L D+++ +GFRGEALASI+D+ S +EI +K + + K+ +
Sbjct: 69 VGNRYFTSKCNSLQDLENPR---FYGFRGEALASIADMASAVEISSKKNKTMKTFVKLFQ 125
Query: 130 GSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHP 188
K L D R GTTV +LFY PVRRK M P+ V++ + ++L+HP
Sbjct: 126 NGKALKACEADLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIEALSLMHP 183
Query: 189 KVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISSPY 248
+SF + S +L + + +G+ L E+ E+SGYISS
Sbjct: 184 SISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIKFKYKEFELSGYISS-- 241
Query: 249 DSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK-------R 299
++ K Q++++N R V + +HK ++ L S C K NG + R
Sbjct: 242 EAHYNKNMQFLFVNKRLVLRTKLHKFIDFLLRKESIIC----KPKNGSATRQMNSSPRPR 297
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK----IA 355
S + Y++N++C YD+ +P KT + F++W+ VL I+ ++ ++KK +
Sbjct: 298 SNPELHGIYVINVQCQFCEYDVCLEPAKTLIEFQNWDTVLVCIQEGVK-MFLKKEKLFVE 356
Query: 356 HDSFDV-DMLEDAELPLESSRFQSHQSS 382
D+ + ED + L S+ Q H SS
Sbjct: 357 LSGEDIKEFSEDNDFSLFSATLQKHVSS 384
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 25/264 (9%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1194
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1163 VDVSSGQAKSLAVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1222
Query: 1195 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1253
E+ + + R K+LS + + E+ + E +LL+ + + ++D G I
Sbjct: 1223 EKQQPQGSGRKKLLS------SIVSPPLEITVTEEQSRLLRCYHKNLEDLGLEI-IFPDN 1275
Query: 1254 SRSF----NKNLNLLQRQITVITLLAVPCIFGVNLSDV-DLLEFLQQLADTDGSSTTPPS 1308
S S L +QR+ + P + + + +E LQ G T P +
Sbjct: 1276 SDSLVLVGKVPLCFVQREANELRRGRSPVTKSIVEEFIREQVELLQTTGGIQG--TLPLT 1333
Query: 1309 VLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQ 1368
V +VL S+AC GAI F D L P E ++E L L FQCAHGRP+ +PL +++ L ++
Sbjct: 1334 VQKVLASQACHGAIKFNDGLSPEESYRLIEALSWCQLPFQCAHGRPSMLPLADIDHLEQE 1393
Query: 1369 ------IAQLNNSSELWHGLHRGE 1386
+A+L ++ WH + E
Sbjct: 1394 KQIKPNLAKLRKMAQAWHLFGKAE 1417
>gi|410962671|ref|XP_003987892.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 1 [Felis catus]
Length = 1459
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 198/395 (50%), Gaps = 28/395 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQARLRSGLAICSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
RD + +G R+ TSK L D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GRDDIDKVGNRYFTSKCNSLQDLENPR---FYGFRGEALASIADMASAVEISSKKNKTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E+ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIKFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK- 298
GYISS ++ K Q++++N R V + +HK ++ L S C K NG +
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKFIDFLLRKESIIC----KPKNGSATRQM 290
Query: 299 ------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
RS + Y++N++C YD+ +P KT + F++W+ VL I+ ++ ++K
Sbjct: 291 NSSPRPRSNPELHGIYVINVQCQFCEYDVCLEPAKTLIEFQNWDTVLVCIQEGVK-MFLK 349
Query: 353 K----IAHDSFDV-DMLEDAELPLESSRFQSHQSS 382
K + D+ + ED + L S+ Q H SS
Sbjct: 350 KEKLFVELSGEDIKEFSEDNDFSLFSATLQKHVSS 384
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 131/288 (45%), Gaps = 49/288 (17%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1163 VDVSSGQAKSLAVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1222
Query: 1185 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L V +DQHAA ER+RLE+L R K+LS + + E+ + E
Sbjct: 1223 LLVLVDQHAAHERVRLEQLIVDSYEKQQPQGSGRKKLLS------SIVSPPLEITVTEEQ 1276
Query: 1230 YQLLQNFAEQIKDWGWICNIHTQGSRSF----NKNLNLLQRQITVITLLAVPCIFGVNLS 1285
+LL+ + + ++D G I S S L +QR+ + P +
Sbjct: 1277 SRLLRCYHKNLEDLGLEI-IFPDNSDSLVLVGKVPLCFVQREANELRRGRSPVTKSIVEE 1335
Query: 1286 DV-DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1344
+ + +E LQ G T P +V +VL S+AC GAI F D L P E ++E L
Sbjct: 1336 FIREQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSPEESYRLIEALSWCQ 1393
Query: 1345 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1386
L FQCAHGRP+ +PL +++ L ++ +A+L ++ WH + E
Sbjct: 1394 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLAKLRKMAQAWHLFGKAE 1441
>gi|344274038|ref|XP_003408825.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 2 [Loxodonta
africana]
Length = 1424
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 209/427 (48%), Gaps = 51/427 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSDEVQAKLRSGLAINSLGQCVEELTLNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRYFTSKCNSVQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALEACEADLTRPSVGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E+ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGRSQKLREIKFKYREFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGKR 299
GYISS ++ K Q++++N R V + +HKL++ L S C K NG
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIIC----KPKNG---SAS 287
Query: 300 SKSQACP----------AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
+ +CP Y++N++C S YD+ +P KT + F++W+ +L I+ +++
Sbjct: 288 RQMNSCPRHRSNPELHGIYIMNVQCQFSEYDVCMEPAKTLIEFQNWDTLLVCIQEGVKTF 347
Query: 350 WMKK---IAHDSFDV-DMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKEC 405
++ + D+ + ED + L + Q H SS ++C
Sbjct: 348 LKQEKLFVELSGEDIKEFSEDNDFSLLGTALQKHMSS-------------------DEKC 388
Query: 406 ERITFQE 412
++++FQE
Sbjct: 389 DQVSFQE 395
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 33/253 (13%)
Query: 1152 FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLE-ELRHKVLSGE 1210
P K + +VLQQVD KFI + + + E+ + + R K+LS
Sbjct: 1169 ILYPYRFTKEMIHSMQVLQQVDNKFIVCLMSTKTEENGEADSYEKQQPQGSGRKKLLS-- 1226
Query: 1211 GKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSF-----------NK 1259
+ + E+ + E +LL + + ++D G + I S S +
Sbjct: 1227 ----STISPPLEITVTEEQRRLLWCYHKNLEDLG-LEFIFPDTSDSLVLVGKVPLCFVER 1281
Query: 1260 NLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACR 1319
N L+R + +T V + +E LQ G T P +V +VL S+AC
Sbjct: 1282 EANELRRGRSTVTKSIVEEFIR------EQVELLQATGSIQG--TLPLTVQKVLASQACH 1333
Query: 1320 GAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEAL--HKQI----AQLN 1373
GAI F D L +E ++E L + L FQCAHGRP+ +PL + + L KQI A+L
Sbjct: 1334 GAIKFNDGLSLAESHRLIEALSRCQLPFQCAHGRPSMLPLADTDHLDQEKQIKPNLAKLR 1393
Query: 1374 NSSELWHGLHRGE 1386
++ W + E
Sbjct: 1394 KMAQAWSFFGKAE 1406
>gi|432939915|ref|XP_004082626.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Oryzias latipes]
Length = 969
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 197/381 (51%), Gaps = 24/381 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LP V+ +RSG + L + VEELV NS+DAGAT V V + + V+V+D+G+G+
Sbjct: 15 IKLLPPEVQGQLRSGVAIPSLQQCVEELVLNSIDAGATCVGVRMDLEAFKVQVIDNGAGM 74
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASI-SDVSLLEIITKAHGRPN 122
+ + + +G R+ TSK G L D+D+ + + GFRGEALASI S +L+EI +++
Sbjct: 75 NTENMQRVGNRYHTSKCGSLEDLDN---VKSHGFRGEALASIVSMATLVEISSRSRASAK 131
Query: 123 GYRKVMK-GSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQS--SPKKVLHSVKKC 179
K+ K G + R GTTV+ + F+N PVRR+ + + ++V H V+
Sbjct: 132 TLVKLFKDGRGVDVFEAETVRPSAGTTVIVCNFFHNMPVRRRRLDAVLEGERVRHRVEA- 190
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
++L++P VSF + + ++ + S + G+ L E+ + E
Sbjct: 191 ---VSLMNPSVSFTLKNDSTGAMMVQLPKAKSTYHRFVQIHGLTRAEKLGEICYSHKQFE 247
Query: 240 ISGYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
GY+ Y++ + Q++Y+N R + K IHKLLN L +K
Sbjct: 248 AVGYLGKEGHYNN----SLQFLYVNERLLLKTRIHKLLNLLLRRLKQKPDPSDGPSVIKS 303
Query: 298 KRSKS--QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
++K + Y+LN++C +S YD+ F+P KT + F+DW+ VL +E A+R+ ++
Sbjct: 304 PKNKQSHELFGVYILNIKCSYSEYDICFEPTKTLIEFRDWDEVLLCVEEAVRAFLRRENL 363
Query: 356 HDSFDVDMLEDAELPLESSRF 376
F + +L ESSR
Sbjct: 364 MSEFSQE-----DLDCESSRV 379
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 125/280 (44%), Gaps = 44/280 (15%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVA------------- 1181
+DIS G L+ +P ++K+ + KV+ QVDKKF+ +
Sbjct: 691 VDISGGQVDGLVVKIHSVLVPYRLSKAMIHSMKVVDQVDKKFLACLINTREEELASDGDT 750
Query: 1182 -GGTLAVIDQHAADERIRLEEL-------RHKVLSGEGKSVAYLDAEQELVLPEIGYQLL 1233
G L ++DQHAA ER+RLE L ++ + + + E+ + E +LL
Sbjct: 751 EGNLLVLVDQHAAHERVRLENLITDSYEDNPEIFGEKWLCSSTIVPPLEISVTEEELRLL 810
Query: 1234 QNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSDVDLL 1290
+ Q++ G + TQ F + L L+++ + P I +
Sbjct: 811 SSCRSQLRSLGLEVTFSETQRPSIFVGKVPLCFLEKETNELKR-GRPSIIKTIVE----- 864
Query: 1291 EFLQQ-----LADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
E+LQ+ L+ T P +VL+VL S AC GA+ F D+L EC +V L L
Sbjct: 865 EYLQEQIELLLSTGRVKRTLPITVLKVLASLACHGAVKFNDTLNRDECHSLVASLSSCQL 924
Query: 1346 CFQCAHGRPTTVPLVNLEALHKQ-----IAQLNNSSELWH 1380
FQCAHGRP+ PLV++ L ++ + +L E W
Sbjct: 925 PFQCAHGRPSIAPLVDIRHLDEESKKPNLKKLRRMYEAWQ 964
>gi|74205421|dbj|BAE21026.1| unnamed protein product [Mus musculus]
Length = 1411
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 184/353 (52%), Gaps = 18/353 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L + VEEL NS+DA T V + V + V+V+D+G G+
Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEVTCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRPN 122
+ D + +G R+ TSK + D+++ +GFRGEALASI+D++ +EI +K +
Sbjct: 62 AGDDVEKVGNRYFTSKCHSVRDLENP---AFYGFRGEALASIADMAGAVEISSKKNTTLK 118
Query: 123 GYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 119 TFVKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSM--DPRLEFEKVRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E+ E S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEFS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGF 294
GYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 237 GYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS- 293
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS S+ Y++N++CP YD+ +P KT + F+ W+ VL I+ ++
Sbjct: 294 -PRHRSASEPHGIYVINVQCPFCEYDVCIEPAKTLIEFQSWDTVLICIQEGVK 345
Score = 96.7 bits (239), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 126/289 (43%), Gaps = 71/289 (24%)
Query: 1155 PDSINKSCLEDAKVLQQVDKKFIPVV-----------AGGTLAVIDQHAADERIRLEEL- 1202
P K + KVLQQVD KFI + G L ++DQHAA ERIRLE+L
Sbjct: 1140 PYRFTKEMIHSVKVLQQVDNKFIACLMSTRMDEDGRTGGNLLVLVDQHAAHERIRLEQLI 1199
Query: 1203 -------------RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGW---- 1245
R K+LS + + + + E +LL+++ + ++D G
Sbjct: 1200 TDSYEKQDPQSAGRKKLLS------STIIPPLAITVSEEQRRLLRSYHKHLEDLGLELLF 1253
Query: 1246 --------------ICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLE 1291
+C + + S L+R + +T V + + +E
Sbjct: 1254 PDASDSLILVGKVPLCFVEREASE--------LRRGRSTVTKSIVEELIR------EQVE 1299
Query: 1292 FLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAH 1351
LQ G T P +V +VL S+AC GAI F D L E ++E L + L FQCAH
Sbjct: 1300 LLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDRLSLEESCRLIEALSLSQLPFQCAH 1357
Query: 1352 GRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRASR 1394
GRP+ +PL +L+ L ++ +A+L WH + E +L++ R
Sbjct: 1358 GRPSMLPLADLDHLEQEKQVKPNLAKLRKMVRAWHLFGKTEQNLQQPIR 1406
>gi|355677887|ref|ZP_09060654.1| hypothetical protein HMPREF9469_03691 [Clostridium citroniae
WAL-17108]
gi|354812973|gb|EHE97587.1| hypothetical protein HMPREF9469_03691 [Clostridium citroniae
WAL-17108]
Length = 679
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 177/354 (50%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L ++ N + +G V+ VV+EL+ N++DA AT V + + C V+V D+
Sbjct: 1 MANITVLDQSTINKIAAGEVIERPASVVKELLENAIDAQATAVTIEIKDGGCSMVRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI RD + L RHATSK+ + D+ + + GFRGEALASI+ V+ +E+I+K
Sbjct: 61 GCGIPRDQIALAFLRHATSKIRSVEDL---FTVSSLGFRGEALASIAAVAQVELISKTSD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R ++G G+++ GTT+++R+LFYN P R+K++++ + H V
Sbjct: 118 SLTGSRYQIEGGA--ERGLEEIGAPEGTTIIARNLFYNTPARKKFLKTPMTEGAH-VAAV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V +IAL HP +S +FI ++ L T + + L+ + FG E S L VNA +G ++
Sbjct: 175 VEKIALSHPDISIRFI--QNNQNKLYTSGNHNLKDLIYTVFGREITSNLLAVNAQEGDIQ 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SG+I P + S + ++ +IN RY+ I K + F +
Sbjct: 233 VSGFIGKPVIARSNRNYENYFINGRYIRSSVISKAIEEAYKPFMMQHKY----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +L+ D+ P K + F D E V + +A+ A K
Sbjct: 282 ------PFTMLHFTIQQDTLDVNVHPTKMELRFSDGEAVYRAVVKAVADALAHK 329
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 20/180 (11%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L +IDQHAA E++ L E K L ++ L L LL + G
Sbjct: 510 LFIIDQHAAHEKV-LYEKTIKTLKTRQYDTQMVEPPIILTLNMNEEVLLSRYMSYFTGMG 568
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLSDVDLLEFLQQLADTDGSS 1303
+ I G R + + VP +F + ++ L+E + L+D D S
Sbjct: 569 F--EIEPFGGREY--------------AVRGVPANLFSIAQKEL-LIEMIDGLSD-DISV 610
Query: 1304 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
P + + S +C+ A+ SL +E ++++L Q + C HGRPT + + E
Sbjct: 611 HNPDIIYERVASMSCKAAVKGHHSLSAAEANELIDQLLQLDNPYACPHGRPTIISMTKYE 670
>gi|354481250|ref|XP_003502815.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Cricetulus
griseus]
Length = 1447
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 211/420 (50%), Gaps = 37/420 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L++ VEEL+ NS+DA A V + V + V+V+D+G G+
Sbjct: 2 IKCLSDEVQAKLRSGLAIISLSQCVEELILNSIDAEAKCVAIRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
+ D + +G R+ TSK + D++++ +GFRGEALASI D+ S +EI++K +
Sbjct: 62 AGDDVEKVGNRYFTSKCNSIQDLENSK---FYGFRGEALASIVDMASTVEILSKKNTTMK 118
Query: 123 GYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L + D R VGTTV +LF PVRRK M P+ V++ V
Sbjct: 119 TFVKMFQNGKALNVCEADLTRPSVGTTVTVYNLFSQFPVRRKSM--DPRLEFEKVRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
I+L+HP +SF + S +L + + +G+ L E++ E S
Sbjct: 177 AISLMHPSISFSLRNDVSGAMVLQLPKTKDICSRFCQIYGLGKSQKLREIHFKYKEFEFS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK- 298
GY+SS ++ K Q++++N R V + +HKL++ L S C + + +
Sbjct: 237 GYVSS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRHMNSSP 294
Query: 299 --RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-RSAWMKKIA 355
RS S+ Y++N++C YD+ +P KT + F++W+ +L I+ + R +K+
Sbjct: 295 RHRSASELHGIYVINVQCQFCDYDVCMEPAKTLIEFQNWDTLLICIQEGVKRFLKQEKLF 354
Query: 356 HDSFDVDMLE---DAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQE 412
+ D+ E D + L + Q+H S+ H+ CE+ +FQE
Sbjct: 355 VELSGEDIKEFNDDNDFSLLGATLQTHVST-------------------HEMCEQSSFQE 395
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 132/288 (45%), Gaps = 49/288 (17%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1151 VDVSSGRAESLAVKIHNVLYPYRFTKEMVHSMQVLQQVDNKFIACLMSTKMEENGKAGGN 1210
Query: 1185 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L V +DQHAA ER+RLE+L R K+LS + + + +P+
Sbjct: 1211 LLVLVDQHAAHERVRLEQLISDSYEKQPPQSSGRKKLLS------SMIIPPLAITVPKEQ 1264
Query: 1230 YQLLQNFAEQIKDWGWICNIHTQGSRSF----NKNLNLLQRQITVITLLAVPCIFGVNLS 1285
+LL ++ + ++D G I S S L ++R+ + L C ++
Sbjct: 1265 RRLLWSYHKHLEDLGLEL-IFPDASDSLILVGKVPLCFVEREAS--ELRRGRCTVTKSIV 1321
Query: 1286 DVDLLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1344
+ + E ++ L T G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1322 EEFIREQVELLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDCLSLEESYRLIEALSLCQ 1381
Query: 1345 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1386
L FQCAHGRP+ +PL +L+ L ++ IA+L + WH + E
Sbjct: 1382 LPFQCAHGRPSMLPLADLDHLEQEKQVKPNIAKLRKMARAWHLFGKAE 1429
>gi|326920823|ref|XP_003206667.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Meleagris
gallopavo]
Length = 1234
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 187/357 (52%), Gaps = 25/357 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L E V+ +RSG + L + VEELVFNS+DA AT V V V + ++VVD+GSG+
Sbjct: 2 IKHLAEDVQARLRSGVAVTSLGQCVEELVFNSIDAKATCVAVRVDLEAFKIQVVDNGSGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR-PN 122
R+ L +G+R+ TSK +AD++ T +GFRGEALASI++++ + ++ +
Sbjct: 62 GREDLSKMGKRYFTSKCSSVADLEKLT---FYGFRGEALASIANMASVVEVSSKSSKTAK 118
Query: 123 GYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ L + + R GTTV +LF+ PVRR+ M P V++ V
Sbjct: 119 TFVKLFHNGHALEVCEAELSRPSGGTTVTVCNLFHQLPVRRRCM--DPVLEFERVRQKVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
I+L+HP VS + S +L + + +G+ L E+ G EIS
Sbjct: 177 AISLMHPSVSLSLRNDISCSMVLQLPKTRDVYSRFCQIYGLGRSQKLREIKHKSGGFEIS 236
Query: 242 GYISSP--YDSISVKAFQYVYINSRYVCKGPIHKLLNHL---------AASFDCSDSWKA 290
GYIS+ Y+ K Q++Y+N R V K +HKL++ L A S S +
Sbjct: 237 GYISTEGHYN----KNMQFLYVNRRLVLKTRLHKLIDFLLRKESVICKAKSVPVSRQGSS 292
Query: 291 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ G L R + ++LN+ C +S YD++ +P KT + F++W+ +LA +E ++
Sbjct: 293 SPGRL---RCGPELYGIFVLNVTCAYSEYDVSLEPAKTLIEFQNWDVLLACVEEGVK 346
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 116/262 (44%), Gaps = 51/262 (19%)
Query: 1152 FFIPDSINKSCLEDAKVLQQVDKKFIPVV-----------AGGTLAVIDQHAADERIRLE 1200
P K + +VLQQVD KFI V G L ++DQHAA ERIRLE
Sbjct: 970 ILYPYRFTKDMIHSMQVLQQVDNKFIACVINTRNEMDKKEGGNLLVLVDQHAAHERIRLE 1029
Query: 1201 ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKN 1260
+L E + V P + ++ E+ + W C KN
Sbjct: 1030 QLIADSYEKEAAACGKKKFLSSSVSPPLEIEV----TEEQRRILWCCY----------KN 1075
Query: 1261 LNLLQRQIT------VITLLAVPCIFG-------------VNLSDVDLLEFLQQ---LAD 1298
L L +++ +I + VP F VN S V+ EF+++ L
Sbjct: 1076 LKDLGLELSFPEINNLILVKKVPLCFTEREANELRRKRQPVNKSIVE--EFIKEQVELVQ 1133
Query: 1299 TDGSS--TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT 1356
T G + T P + L+VL S+AC GAI F DSL E ++E L L FQCAHGRP+
Sbjct: 1134 TTGGARGTMPLTFLKVLASQACHGAIKFNDSLTSEESCRLMEALSSCQLPFQCAHGRPSM 1193
Query: 1357 VPLVNLEALHKQIAQLNNSSEL 1378
+PL +++ L +++ N + L
Sbjct: 1194 MPLADIDHLQQEMQPKPNLARL 1215
>gi|344246687|gb|EGW02791.1| DNA mismatch repair protein Mlh3 [Cricetulus griseus]
Length = 1533
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 211/422 (50%), Gaps = 37/422 (8%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGS 61
I L + V+ +RSG + L++ VEEL+ NS+DA A V + V + V+V+D+G
Sbjct: 143 AMIKCLSDEVQAKLRSGLAIISLSQCVEELILNSIDAEAKCVAIRVNMETFQVQVIDNGF 202
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGR 120
G++ D + +G R+ TSK + D++++ +GFRGEALASI D+ S +EI++K +
Sbjct: 203 GMAGDDVEKVGNRYFTSKCNSIQDLENSK---FYGFRGEALASIVDMASTVEILSKKNTT 259
Query: 121 PNGYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ K+ + K L + D R VGTTV +LF PVRRK M P+ V++
Sbjct: 260 MKTFVKMFQNGKALNVCEADLTRPSVGTTVTVYNLFSQFPVRRKSM--DPRLEFEKVRQR 317
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V I+L+HP +SF + S +L + + +G+ L E++ E
Sbjct: 318 VEAISLMHPSISFSLRNDVSGAMVLQLPKTKDICSRFCQIYGLGKSQKLREIHFKYKEFE 377
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKG 297
SGY+SS ++ K Q++++N R V + +HKL++ L S C + + +
Sbjct: 378 FSGYVSS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRHMNS 435
Query: 298 K---RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-RSAWMKK 353
RS S+ Y++N++C YD+ +P KT + F++W+ +L I+ + R +K
Sbjct: 436 SPRHRSASELHGIYVINVQCQFCDYDVCMEPAKTLIEFQNWDTLLICIQEGVKRFLKQEK 495
Query: 354 IAHDSFDVDMLE---DAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITF 410
+ + D+ E D + L + Q+H S+ H+ CE+ +F
Sbjct: 496 LFVELSGEDIKEFNDDNDFSLLGATLQTHVST-------------------HEMCEQSSF 536
Query: 411 QE 412
QE
Sbjct: 537 QE 538
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 25/264 (9%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1194
+D+SSG L P K + +VLQQVD KFI + + + +
Sbjct: 1261 VDVSSGRAESLAVKIHNVLYPYRFTKEMVHSMQVLQQVDNKFIACLMSTKMEENGKADSY 1320
Query: 1195 ERIRLEEL-RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1253
E+ + R K+LS + + + +P+ +LL ++ + ++D G I
Sbjct: 1321 EKQPPQSSGRKKLLS------SMIIPPLAITVPKEQRRLLWSYHKHLEDLGLEL-IFPDA 1373
Query: 1254 SRSF----NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG-SSTTPPS 1308
S S L ++R+ + L C ++ + + E ++ L T G T P +
Sbjct: 1374 SDSLILVGKVPLCFVEREAS--ELRRGRCTVTKSIVEEFIREQVELLQTTGGIQGTLPLT 1431
Query: 1309 VLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQ 1368
V +VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL +L+ L ++
Sbjct: 1432 VQKVLASQACHGAIKFNDCLSLEESYRLIEALSLCQLPFQCAHGRPSMLPLADLDHLEQE 1491
Query: 1369 ------IAQLNNSSELWHGLHRGE 1386
IA+L + WH + E
Sbjct: 1492 KQVKPNIAKLRKMARAWHLFGKAE 1515
>gi|384252607|gb|EIE26083.1| hypothetical protein COCSUDRAFT_40245 [Coccomyxa subellipsoidea
C-169]
Length = 1051
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 124/228 (54%), Gaps = 23/228 (10%)
Query: 1153 FIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGK 1212
+P SI K L A+ L+QVD+KFIP+V G LA++DQHAADER++LE L+ +V+ G
Sbjct: 831 LVPASITKKALAAARPLRQVDRKFIPLVCGSQLAIMDQHAADERVQLEHLQDQVVGAGGV 890
Query: 1213 SVAY----LDAEQELVLPEIGYQLLQNFAEQIKDWGW------ICNIHTQGSRSFNKNLN 1262
VA L Q L + L F + ++ WGW C I + + +
Sbjct: 891 PVATHSCTLSPPQPLDISAAEQHTLDRFNDILEAWGWHWDIPGACTIESAAAHGGAR--- 947
Query: 1263 LLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAI 1322
+T AV + G L+ V+L FL QL T GS+ PP VLRVL SKAC AI
Sbjct: 948 --------LTHAAV--VLGTPLNGVELQTFLHQLESTGGSAKVPPGVLRVLASKACHSAI 997
Query: 1323 MFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIA 1370
FGD L +C ++E LK T CAHGRPT PLV++ ALH+ IA
Sbjct: 998 RFGDVLDIDQCERLLENLKSTRAWHCCAHGRPTVAPLVDVTALHRVIA 1045
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 141/265 (53%), Gaps = 16/265 (6%)
Query: 91 GIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKGSKCLYLGID-DERKDVGTTV 149
G+ T GFRGEALAS+++ + LEI +KA G + K+++G + L G+ ++R GT V
Sbjct: 4 GLITLGFRGEALASLAEAACLEITSKARGAFETHTKLLQGGRVLKEGLALEQRIKQGTRV 63
Query: 150 VSRDLFYNQPVRRKYM-QSSPKKVLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCS 208
RDLF+N+PVRRK++ + KK + ++ +LR+AL V F F+D D LLC
Sbjct: 64 TVRDLFFNKPVRRKHLIGAGIKKEVDDCREHILRLALPRSNVGFTFVDSMRHDVLLCLKR 123
Query: 209 SSSPLALLISSFGIEDFSFLDEVNA-NDGALEISGYISSPYDSISVKAFQYVYINSRYVC 267
+ +L FG L + A +DG ++ YI +P + + KA QY+Y+N RYV
Sbjct: 124 GRTERDVLPLVFG----QRLVQCGACHDGPIKAELYICNPLEGFASKARQYMYVNGRYVS 179
Query: 268 KGPIHKLLNHLAASF--DCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDP 325
KLLN L D + G L+ PA++ ++ CP L D+T P
Sbjct: 180 GDAASKLLNDLFQQLLQDLNRRGCEQQGRLR-------RFPAFICHISCPPGLPDVTARP 232
Query: 326 LKTHVVFKDWEPVLAFIERAIRSAW 350
KT V F DW PVL+ + A AW
Sbjct: 233 DKTAVQFTDWTPVLSAVRGAAMQAW 257
>gi|26330996|dbj|BAC29228.1| unnamed protein product [Mus musculus]
Length = 434
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 185/353 (52%), Gaps = 18/353 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L + VEEL NS+DA AT V + V + V+V+D+G G+
Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRPN 122
+ D + +G R+ TSK + D+++ +GFRGEALASI+D++ +EI +K +
Sbjct: 62 AGDDVEKVGNRYFTSKCHSVRDLENP---AFYGFRGEALASIADMAGAVEISSKKNTTLK 118
Query: 123 GYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 119 TFVKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSM--DPRLEFEKVRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E+ E S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEFS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGF 294
GYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 237 GYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS- 293
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS S+ Y++N++CP YD+ +P KT + F+ W+ VL I+ ++
Sbjct: 294 -PRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQSWDTVLICIQEGVK 345
>gi|73963657|ref|XP_537511.2| PREDICTED: DNA mismatch repair protein Mlh3 isoform 1 [Canis lupus
familiaris]
Length = 1456
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 196/383 (51%), Gaps = 24/383 (6%)
Query: 11 VRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVL 70
V+ +RSG + L + VEELV NS+DA A V V V + V+V+D+G G+ D +
Sbjct: 9 VQARLRSGLAICSLGQCVEELVLNSIDAEAKCVAVRVNMETFQVQVIDNGFGMGSDDIDK 68
Query: 71 LGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPNGYRKVMK 129
+G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K + + K+ +
Sbjct: 69 VGNRYFTSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTMKTFVKLFQ 125
Query: 130 GSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHP 188
K L + R GTTV +LFY PVRRK M P+ V++ + ++L+HP
Sbjct: 126 NGKALKACEANLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIEALSLMHP 183
Query: 189 KVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISSPY 248
+SF + S +L + + +G+ L E+ E+SGYISS
Sbjct: 184 SISFSLRNDVSGSMVLQVPKTKDVCSRFCQIYGLGKSQKLREIKFKYKEFELSGYISS-- 241
Query: 249 DSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGFLKGKRSK 301
++ K Q++++N R V + +HK ++ L S C S S + N+ R+
Sbjct: 242 EAHYNKNMQFLFVNKRLVLRTKLHKFIDFLLRRESIICKPKNGSSSRQVNSS--PRHRAN 299
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK----IAHD 357
+ Y++N++C YD+ +P KT + F+DW+ VL I+ A++ ++KK +
Sbjct: 300 PELHGIYVINMQCQFCEYDVCMEPAKTLIEFQDWDTVLVCIQEAVK-MFLKKEKLFMELS 358
Query: 358 SFDV-DMLEDAELPLESSRFQSH 379
D+ + ED + L S+ Q H
Sbjct: 359 GEDIKEFSEDNDFSLFSATLQKH 381
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 134/287 (46%), Gaps = 47/287 (16%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L+ P K + +VLQQVD KFI + AGG
Sbjct: 1160 VDVSSGQAKSLVVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1219
Query: 1185 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L V +DQHAA ER+RLE+L R K+LS + + ++ + E
Sbjct: 1220 LLVLVDQHAAHERVRLEQLITDSYEKQQPQGSGRKKLLS------STVSPPLKIRVTEEQ 1273
Query: 1230 YQLLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSD 1286
+LL+ + + ++D G I T S + L ++R+ + P N+ +
Sbjct: 1274 RRLLRCYHKNLEDLGLEILFPDTNDSLVLVGKVPLCFIEREANELRRGRSP--VTRNIVE 1331
Query: 1287 VDLLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
+ E ++ L T G T P +V +VL S+AC GAI F D L E ++E L L
Sbjct: 1332 EFIREQVELLQTTGGIQRTLPLTVQKVLASQACHGAIKFNDGLSREESCRLIEALSWCQL 1391
Query: 1346 CFQCAHGRPTTVPLVNLEAL--HKQI----AQLNNSSELWHGLHRGE 1386
FQCAHGRP+ +PL +++ L KQI A+L ++ WH + E
Sbjct: 1392 PFQCAHGRPSMLPLADIDHLGQEKQIKPNLAKLRKMAQAWHLFGKAE 1438
>gi|395503885|ref|XP_003756292.1| PREDICTED: DNA mismatch repair protein Mlh3 [Sarcophilus harrisii]
Length = 1436
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 182/352 (51%), Gaps = 15/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L E V+ +RSG + +++ VEEL NS+DA A V V V + V+V+D+GSGI
Sbjct: 2 IKCLSEEVQVKLRSGVAVSSISQCVEELALNSIDAEAKCVAVRVNMETFKVQVIDNGSGI 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
RD + +G+++ TSK + D+++ +GFRGEAL+SI ++ S +EI +K +
Sbjct: 62 ERDDVERVGKQYFTSKCKSVQDLENP---KFYGFRGEALSSIVNMASAVEIASKTNKTVE 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L + R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQNGKALETCEAELTRPSSGTTVTIFNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + G+ L E+N E++
Sbjct: 177 ALSLMHPSISFSLRNDISGSMVLQLPKTKDTCSRFCQIHGLGKSQKLREINFKHKEFELN 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFL 295
GYIS ++ K Q++++N R V + +HKL++ L S C + K
Sbjct: 237 GYISC--EAHYNKNLQFLFVNKRLVLRTRLHKLIDFLLRKESIICRPKGGPASKQMTSSP 294
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS S+ Y++N++C YD+ DP KT + F++W+ VL I+ I+
Sbjct: 295 PRHRSNSELHGIYVINVKCQFCEYDVCLDPAKTLIEFRNWDTVLVCIQEGIK 346
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 115/270 (42%), Gaps = 53/270 (19%)
Query: 1152 FFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGTLAV-IDQHAADERIRLE 1200
P K + +VLQQVD KFI + AGG L V +DQHAA ERIRLE
Sbjct: 1176 ILYPYRFTKEMVHSMQVLQQVDNKFIACLMSTKQEENGKAGGNLLVLVDQHAAHERIRLE 1235
Query: 1201 EL--------------RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWI 1246
+L R K+LS S Y ++ + E +LLQ + + ++D G
Sbjct: 1236 QLICDSYEKEQPKSFHRKKLLS----STIY--PPMKVTVTEEQRRLLQCYHKALEDLGLK 1289
Query: 1247 CNIHTQGSRSF---NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSS 1303
S L ++R+ + P + L + LL F Q AD D
Sbjct: 1290 LIFPDPPSSHILVGEVPLCFVEREANEVRR-GRPTVTKSILEKI-LLMFSQ--ADRDN-- 1343
Query: 1304 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
V + + GAI F DSL E ++E L L FQCAHGRP+ +PL ++
Sbjct: 1344 ------FFVDSEENWNGAIKFNDSLSLEESCRLIEALSWCQLPFQCAHGRPSMLPLADIN 1397
Query: 1364 ALHKQ-------IAQLNNSSELWHGLHRGE 1386
L ++ +A+L ++ WH + E
Sbjct: 1398 HLEQEKQNSKPNLAKLCKMAQAWHLFKKAE 1427
>gi|73963653|ref|XP_868119.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 3 [Canis lupus
familiaris]
Length = 1432
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 196/383 (51%), Gaps = 24/383 (6%)
Query: 11 VRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVL 70
V+ +RSG + L + VEELV NS+DA A V V V + V+V+D+G G+ D +
Sbjct: 9 VQARLRSGLAICSLGQCVEELVLNSIDAEAKCVAVRVNMETFQVQVIDNGFGMGSDDIDK 68
Query: 71 LGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPNGYRKVMK 129
+G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K + + K+ +
Sbjct: 69 VGNRYFTSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTMKTFVKLFQ 125
Query: 130 GSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHP 188
K L + R GTTV +LFY PVRRK M P+ V++ + ++L+HP
Sbjct: 126 NGKALKACEANLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIEALSLMHP 183
Query: 189 KVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISSPY 248
+SF + S +L + + +G+ L E+ E+SGYISS
Sbjct: 184 SISFSLRNDVSGSMVLQVPKTKDVCSRFCQIYGLGKSQKLREIKFKYKEFELSGYISS-- 241
Query: 249 DSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGFLKGKRSK 301
++ K Q++++N R V + +HK ++ L S C S S + N+ R+
Sbjct: 242 EAHYNKNMQFLFVNKRLVLRTKLHKFIDFLLRRESIICKPKNGSSSRQVNSS--PRHRAN 299
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK----IAHD 357
+ Y++N++C YD+ +P KT + F+DW+ VL I+ A++ ++KK +
Sbjct: 300 PELHGIYVINMQCQFCEYDVCMEPAKTLIEFQDWDTVLVCIQEAVK-MFLKKEKLFMELS 358
Query: 358 SFDV-DMLEDAELPLESSRFQSH 379
D+ + ED + L S+ Q H
Sbjct: 359 GEDIKEFSEDNDFSLFSATLQKH 381
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 121/263 (46%), Gaps = 23/263 (8%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1194
+D+SSG L+ P K + +VLQQVD KFI + + +
Sbjct: 1160 VDVSSGQAKSLVVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1219
Query: 1195 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGW-ICNIHTQ 1252
E+ + + R K+LS + + ++ + E +LL+ + + ++D G I T
Sbjct: 1220 EKQQPQGSGRKKLLS------STVSPPLKIRVTEEQRRLLRCYHKNLEDLGLEILFPDTN 1273
Query: 1253 GSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG-SSTTPPSV 1309
S + L ++R+ + P N+ + + E ++ L T G T P +V
Sbjct: 1274 DSLVLVGKVPLCFIEREANELRRGRSP--VTRNIVEEFIREQVELLQTTGGIQRTLPLTV 1331
Query: 1310 LRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEAL--HK 1367
+VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL +++ L K
Sbjct: 1332 QKVLASQACHGAIKFNDGLSREESCRLIEALSWCQLPFQCAHGRPSMLPLADIDHLGQEK 1391
Query: 1368 QI----AQLNNSSELWHGLHRGE 1386
QI A+L ++ WH + E
Sbjct: 1392 QIKPNLAKLRKMAQAWHLFGKAE 1414
>gi|163814089|ref|ZP_02205481.1| hypothetical protein COPEUT_00242 [Coprococcus eutactus ATCC 27759]
gi|158450538|gb|EDP27533.1| DNA mismatch repair domain protein [Coprococcus eutactus ATCC
27759]
Length = 702
Score = 160 bits (404), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 181/351 (51%), Gaps = 26/351 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I L + N + +G V+ + V++ELV NS+D+GAT + V V G +++V D+GSG
Sbjct: 2 IKVLDQNTINKIAAGEVIEKPSSVIKELVENSIDSGATAITVEVKGSGLSFLRVTDNGSG 61
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D + L RHATSK L ++D I + GFRGEALASI+ V+ +E+ITK
Sbjct: 62 IKKDEVKLAFLRHATSK---LVTVEDLLSISSLGFRGEALASIASVAQVEMITKTADDVT 118
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G R + G + + ++ GTT++ R+LFYN P R+K+M++ ++ + + + R
Sbjct: 119 GLRYQIHGGR--EISSEEIGAPGGTTIIVRNLFYNTPARKKFMKTDLTEISY-IYDLMCR 175
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I + HPK+SFKFI ++ L T + ++ +G + S L E+NA + ++ISG
Sbjct: 176 ICMSHPKISFKFISNGTDK--LFTSGNGKLRDIIYHIYGRDITSNLLEINAENDYMKISG 233
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
YI+ P S ++F+ Y+N RY+ + K + +F +
Sbjct: 234 YIARPCISRGNRSFEGYYVNHRYIKSAVLTKAIEDAFRTFVMIHKF-------------- 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +N + L D+ P K + F + + + +F AIR + K
Sbjct: 280 ---PFTEINFQVRPDLLDVNVHPTKMELKFANSQDIYSFTYNAIRETLLFK 327
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 24/200 (12%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
+++ Q+ K + + G ++DQHAA E+++ EEL + + S YL + L
Sbjct: 515 RLIGQLFKTYWLIEYDGKFFIMDQHAAHEKVKYEELMENYKNKKIYS-QYLMPPAVVTLS 573
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLS 1285
+ L E + G+ I G R F N AVP +FG++
Sbjct: 574 ATEIEFLHENMETFEALGY--QIENFGGREFKLN--------------AVPDNLFGLDGR 617
Query: 1286 DVDLLEFLQQLADTDGSS--TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1343
++ F+ +AD S+ T + L++ AC+ AI + E ++++L +
Sbjct: 618 EL----FIDFIADASSSAKKVTIDVFIHKLSTMACKAAIKGNTEISFKEADALIDQLLKL 673
Query: 1344 SLCFQCAHGRPTTVPLVNLE 1363
+ C HGRPT + + E
Sbjct: 674 ENPYTCPHGRPTVISMTEAE 693
>gi|358414255|ref|XP_003582790.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3
[Bos taurus]
gi|359069767|ref|XP_003586644.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3
[Bos taurus]
Length = 1460
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 199/392 (50%), Gaps = 22/392 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSAEVQARLRSGLAVCSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRYFTSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSKKNKSMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E+N E++
Sbjct: 177 ALSLMHPTISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREINFKYKEFELT 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGF 294
G+ISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 237 GFISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQVNSN- 293
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK- 353
RS + Y++N++C YD+ +P KT + F++W+ +L I+ +++ K+
Sbjct: 294 -PRPRSNPELHGIYVINVQCQFCEYDVCLEPAKTLIEFQNWDTLLICIQEGVKTFLKKEK 352
Query: 354 --IAHDSFDV-DMLEDAELPLESSRFQSHQSS 382
+ S D+ + ED + L S+ Q SS
Sbjct: 353 LFVELSSEDIKEFSEDNDFSLFSASLQKQVSS 384
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 130/281 (46%), Gaps = 47/281 (16%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 1185 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L V +DQHAA ERIRLE+L R K+LS + + E+ + E
Sbjct: 1218 LLVLVDQHAAHERIRLEQLIIDSYEKQQPQGFGRKKLLS------SIVSPPLEITVTEEQ 1271
Query: 1230 YQLLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSD 1286
+LL+ + + ++D G I T S + L ++R+ + + G+
Sbjct: 1272 RRLLRCYHKNLEDLGLEIVFPDTSDSLVLIGKVPLCFVEREASELRRGRSTVTKGIVEEF 1331
Query: 1287 V-DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
+ + +E LQ G T P +V +VL S+AC GAI F D L E ++E L L
Sbjct: 1332 IREQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSFEESCRLIEALSWCQL 1389
Query: 1346 CFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWH 1380
FQCAHGRP+ +PL N++ L ++ +A+L ++ WH
Sbjct: 1390 PFQCAHGRPSMLPLANIDHLEQEKQTKPNLAKLRRMAQAWH 1430
>gi|269316183|ref|XP_638891.4| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4]
gi|256012918|gb|EAL65556.2| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4]
Length = 1658
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 193/388 (49%), Gaps = 44/388 (11%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRD 66
L E V VRS V+ L + +EE++FNS+DA AT + + + + N +V D+G G+S +
Sbjct: 28 LKEEVSLKVRSSVVIVSLEQAIEEIIFNSIDARATVISISINLSNLSFEVKDNGFGLSYE 87
Query: 67 GLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRK 126
L +G+R+ TSK+ L+D+ + TFG+RGE+LAS+S++S L+II+ + G + +K
Sbjct: 88 NLKFVGDRNCTSKINSLSDL---KSLKTFGYRGESLASLSNISSLDIISNSFG--STIQK 142
Query: 127 VMKGSKCLYLGIDDERKDV------------------------GTTVVSRDLFYNQPVRR 162
+ K I D GT V RDLF N PVRR
Sbjct: 143 SISFGKVDQFKILDNNNSSSCDNNNNNVNNNNINNNNNNSIANGTIVKIRDLFKNYPVRR 202
Query: 163 KYMQSSPKKVLHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGI 222
+ + K++ +KK + IAL PK+ F D +L T +S L+ +G
Sbjct: 203 QGLYHPNLKLI--IKKRIEIIALSFPKIVFSVYDETKSLTILKTPKDTSFLSYFKHFYGQ 260
Query: 223 EDFSFLDEV---------NANDGALEISGYISSPYDS-ISVKAFQYVYINSRYVCKGPIH 272
E + L+ V N N + +SGY+SSP+ K+FQY+Y+N+R V +H
Sbjct: 261 EMMNKLEYVTSENYNNTTNNNSSSYYLSGYLSSPHKKGHPNKSFQYIYLNNRIVLNTKLH 320
Query: 273 KLLNHLAASFDC-SDSWKANNGFLK-GKRSKSQACPAYLLNLRCPHSLYDLTFDP-LKTH 329
+ +N L + + + KAN K K+ + P ++L LRC Y+ +++P KT
Sbjct: 321 RHVNQLYQKYRLFNATRKANANVSKIAKKEVIDSNPIFILFLRCSQLEYERSYEPSSKTF 380
Query: 330 VVFKDWEPVLAFIERAIRSAWMKKIAHD 357
+ F DW+ LA I+ + K + D
Sbjct: 381 LEFNDWKKPLAEIQNVLTKFLTKHRSDD 408
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 112/217 (51%), Gaps = 20/217 (9%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGK-SVAY 1216
I K L++ K + Q D KF+ A G + ++DQHA ERI+LE L K GE K +
Sbjct: 1459 IPKEMLQNFKFITQWDNKFLICEADGIVLILDQHAVSERIKLEILERKYF-GENKFDLCP 1517
Query: 1217 LDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAV 1276
+ L E +L++ + + ++ WG+ +FNK T I + V
Sbjct: 1518 MPERTRWSLTEYELELMRIYTKPLEQWGF--------KWTFNK---------TSINISQV 1560
Query: 1277 PCIFGVNLSDVDLLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1335
P V L DL EFL QL + G +S PP+ R+L SKACR AI FG+ L C
Sbjct: 1561 PMFCLVGLGVNDLREFLYQLESSKGATSNRPPAAHRILASKACRTAIKFGNKLSREICIK 1620
Query: 1336 IVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1372
++E+L + ++ FQCAHGRP+ +PL+N L + L
Sbjct: 1621 LLEDLNECNIPFQCAHGRPSIIPLINYGKLFSSVKGL 1657
>gi|291406753|ref|XP_002719689.1| PREDICTED: mutL homolog 3 isoform 2 [Oryctolagus cuniculus]
Length = 1453
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 181/346 (52%), Gaps = 18/346 (5%)
Query: 11 VRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVL 70
V+ +RSG + L + VEELV NS+DA AT V V V + V+V+D+G G+ +
Sbjct: 9 VQAKLRSGLAISSLGQCVEELVLNSIDAEATCVAVRVNMETYQVQVIDNGCGMGSVDVDK 68
Query: 71 LGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPNGYRKVMK 129
+G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K + + K+ +
Sbjct: 69 VGNRYFTSKCTSVQDLENPR---FYGFRGEALASIADMASTMEISSKKNRTMKTFVKLFQ 125
Query: 130 GSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHP 188
K L D R GTTV +LFY PVRRK M P+ V++ + ++L+HP
Sbjct: 126 NGKALKAYEADLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIEALSLMHP 183
Query: 189 KVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISSPY 248
+SF + S +L + + +G+ L E++ E++GYISS
Sbjct: 184 SISFSLRNDVSGSMVLQLPKTKDMCSRFCQIYGLRKSQKLREIHFKYKEFELNGYISS-- 241
Query: 249 DSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGFLKGKRSK 301
++ K Q++++N R V + +HKL++ L S C S S + N+ RS
Sbjct: 242 EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQMNSS--PRHRST 299
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ Y++N++CP YD+ +P KT + F++W+ L I+ ++
Sbjct: 300 PELYGIYVMNVQCPFCEYDVCMEPAKTLIEFQNWDTPLVCIQEGVK 345
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 131/294 (44%), Gaps = 61/294 (20%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1157 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGKAGGN 1216
Query: 1185 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L V +DQHAA ERIRLE+L R K+LS + + E+ + E
Sbjct: 1217 LLVLVDQHAAHERIRLEQLLTESYEKQQPQGSGRKKLLS------STIIPPLEITVTEEQ 1270
Query: 1230 YQLLQNFAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPC 1278
+LL+ + ++++D G + I S S + N L+R + +T V
Sbjct: 1271 RRLLRCYHKRLEDLG-LEFIFPDTSDSLILVGKVPLCFVEREANELRRGRSTVTKSIVEE 1329
Query: 1279 IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1338
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E
Sbjct: 1330 FLR------EQVELLQTTGSIQG--TLPLTVQKVLASQACHGAIKFNDGLSLEESRRLIE 1381
Query: 1339 ELKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1386
L L FQCAHGRP+ +PL +++ L ++ +A+L ++ W + E
Sbjct: 1382 ALSCCQLPFQCAHGRPSMLPLADMDHLEQEKQKKPNLAKLRKMAQAWRLFGKAE 1435
>gi|291406751|ref|XP_002719688.1| PREDICTED: mutL homolog 3 isoform 1 [Oryctolagus cuniculus]
Length = 1421
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 181/346 (52%), Gaps = 18/346 (5%)
Query: 11 VRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVL 70
V+ +RSG + L + VEELV NS+DA AT V V V + V+V+D+G G+ +
Sbjct: 9 VQAKLRSGLAISSLGQCVEELVLNSIDAEATCVAVRVNMETYQVQVIDNGCGMGSVDVDK 68
Query: 71 LGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPNGYRKVMK 129
+G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K + + K+ +
Sbjct: 69 VGNRYFTSKCTSVQDLENPR---FYGFRGEALASIADMASTMEISSKKNRTMKTFVKLFQ 125
Query: 130 GSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHP 188
K L D R GTTV +LFY PVRRK M P+ V++ + ++L+HP
Sbjct: 126 NGKALKAYEADLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIEALSLMHP 183
Query: 189 KVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISSPY 248
+SF + S +L + + +G+ L E++ E++GYISS
Sbjct: 184 SISFSLRNDVSGSMVLQLPKTKDMCSRFCQIYGLRKSQKLREIHFKYKEFELNGYISS-- 241
Query: 249 DSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGFLKGKRSK 301
++ K Q++++N R V + +HKL++ L S C S S + N+ RS
Sbjct: 242 EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQMNSS--PRHRST 299
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ Y++N++CP YD+ +P KT + F++W+ L I+ ++
Sbjct: 300 PELYGIYVMNVQCPFCEYDVCMEPAKTLIEFQNWDTPLVCIQEGVK 345
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 131/294 (44%), Gaps = 61/294 (20%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1125 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGKAGGN 1184
Query: 1185 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L V +DQHAA ERIRLE+L R K+LS + + E+ + E
Sbjct: 1185 LLVLVDQHAAHERIRLEQLLTESYEKQQPQGSGRKKLLS------STIIPPLEITVTEEQ 1238
Query: 1230 YQLLQNFAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPC 1278
+LL+ + ++++D G + I S S + N L+R + +T V
Sbjct: 1239 RRLLRCYHKRLEDLG-LEFIFPDTSDSLILVGKVPLCFVEREANELRRGRSTVTKSIVEE 1297
Query: 1279 IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1338
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E
Sbjct: 1298 FLR------EQVELLQTTGSIQG--TLPLTVQKVLASQACHGAIKFNDGLSLEESRRLIE 1349
Query: 1339 ELKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1386
L L FQCAHGRP+ +PL +++ L ++ +A+L ++ W + E
Sbjct: 1350 ALSCCQLPFQCAHGRPSMLPLADMDHLEQEKQKKPNLAKLRKMAQAWRLFGKAE 1403
>gi|295094833|emb|CBK83924.1| DNA mismatch repair protein MutL [Coprococcus sp. ART55/1]
Length = 717
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 180/351 (51%), Gaps = 26/351 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I L + N + +G V+ + V++ELV NS+D+GAT V V V G +++V D+G+G
Sbjct: 2 IKVLDQNTINKIAAGEVIEKPSSVIKELVENSIDSGATAVTVEVKGGGLSFLRVTDNGAG 61
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D + L RHATSKL ++D I + GFRGEALASI+ V+ +E+ITK
Sbjct: 62 IKKDEVKLAFLRHATSKL---VTVEDLLSISSLGFRGEALASIAAVAQVEMITKTADDVT 118
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G R + G K + ++ GTT++ R+LFYN P R+K+M++ + + + + R
Sbjct: 119 GLRYQIHGGK--EISSEEIGAPGGTTIIVRNLFYNTPARKKFMKTDATETSY-IYDLMCR 175
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I + HP++SFKFI ++ L T + ++ +G + S L E+NA + ++ISG
Sbjct: 176 ICMSHPEISFKFIANGTDK--LFTSGNGKLRDIIYHIYGRDITSNLLEINAENDYMKISG 233
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
YI+ P S ++F+ Y+N RY+ + K + +F +
Sbjct: 234 YIARPCISRGNRSFEGYYVNHRYIKSAVLTKAIEDAFRTFVMIHKF-------------- 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +N + L D+ P K + F + + + +F AIR + K
Sbjct: 280 ---PFTEINFQVRPDLLDVNVHPTKMELKFANSQDIYSFTYNAIRETLLFK 327
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 1143 SGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEEL 1202
+G ++ + F + K +++ Q+ K + + G ++DQHAA E+++ EEL
Sbjct: 506 AGKKYVQQDMFQEKFLTKEARAKHRLIGQLFKTYWLIEYDGKFFIMDQHAAHEKVKYEEL 565
Query: 1203 RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLN 1262
+ + S YL + L + L + + G+ I G R F N
Sbjct: 566 MENYKNKKIYS-QYLMPPAVVTLSAAEIEFLHENMDMFEALGY--QIENFGGREFKLN-- 620
Query: 1263 LLQRQITVITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSS--TTPPSVLRVLNSKACR 1319
AVP +FG++ ++ F+ +AD S+ T + + L++ AC+
Sbjct: 621 ------------AVPDNLFGLDGREL----FIDFIADASSSAKKVTIDTFIHKLSTMACK 664
Query: 1320 GAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
AI + E ++++L + + C HGRPT + + E
Sbjct: 665 AAIKGNTEISFKEADALIDQLLKLENPYTCPHGRPTVISMTEAE 708
>gi|374296086|ref|YP_005046277.1| DNA mismatch repair protein MutL [Clostridium clariflavum DSM
19732]
gi|359825580|gb|AEV68353.1| DNA mismatch repair protein MutL [Clostridium clariflavum DSM
19732]
Length = 729
Score = 157 bits (398), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 177/354 (50%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E N + +G V+ VV+ELV NS+DAG++ + + + +KVVD+
Sbjct: 1 MGKIVILDENTANQIAAGEVVERPASVVKELVENSIDAGSSNISIEINNGGISMIKVVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI D + + ERH+TSK+ DD I T GFRGEALASI+ VSL+E+ T+
Sbjct: 61 GSGIDEDDVEIAFERHSTSKIRK---ADDLESIYTLGFRGEALASIASVSLVELTTRVKE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+P Y K +K L + VGTT + RDLFYN P R K+++ + + V
Sbjct: 118 KP--YGKYIKIQGGLVKEVRQTGCPVGTTFIVRDLFYNTPARFKFLKKDTTEAGY-VSDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIAL +P +S K ++ + + ++ T ++ L+ + S +G E + EV D +E
Sbjct: 175 VNRIALGNPHISIKLVN--NRNCVIHTPGNNDLLSTIFSLYGKETAKEVLEVRYKDEKVE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY P + + + +Q +YIN RY+ I ++ ++ + + F+
Sbjct: 233 IFGYAGKPEIARTTRNYQSIYINGRYIRNKTIFSAIDEAYKTYLMKNKF----AFV---- 284
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+L ++ D+ P K V F D + + + AI +A + K
Sbjct: 285 ---------VLQIKINPIFVDVNVHPTKMEVRFSDEQTIFRAVYHAINNALLSK 329
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 1163 LEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQE 1222
L DA+++ QV +I + +G L +IDQHAA ERIR EEL+ K E + L
Sbjct: 537 LIDARIIGQVFSTYILLQSGDDLLIIDQHAAHERIRFEELKRKYRENESLAQFLLSP--- 593
Query: 1223 LVLPEIGYQ---LLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCI 1279
V+ EI Q L+ E++ G+ +F KN +++ R + VI +P
Sbjct: 594 -VVIEITNQELKLIDENKEKLNKLGF-------SFENFGKN-SIILRSVPVI----LPDN 640
Query: 1280 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1339
+ S +D+L+FL + + L + AC+ A+ L E I+++
Sbjct: 641 ARIKESFLDVLDFLVNEKRKENVLVEEEA----LYTLACKAAVKANKKLDELEIKKILDD 696
Query: 1340 LKQTSLCFQCAHGRPTTVPLVN--LEALHKQI 1369
L + + C HGRPT + + E + K+I
Sbjct: 697 LNKIENPYTCPHGRPTIIKITKHEFEKMFKRI 728
>gi|395827847|ref|XP_003787104.1| PREDICTED: DNA mismatch repair protein Mlh3 [Otolemur garnettii]
Length = 1430
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 179/353 (50%), Gaps = 18/353 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAINSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRYFTSKCNSVQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQLPVRRKSM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L +N E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKAKDVRSRFCQIYGLGKSQKLRAINFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK--- 298
GYISS ++ K Q++++N R V K +HKL++ L S K NG +
Sbjct: 237 GYISS--EAHYNKNIQFLFVNKRLVLKTKLHKLIDFLLRRE--SSICKPKNGPASRQMNS 292
Query: 299 ----RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS + Y++N++C YD+ DP KT + F++W+ +L I+ ++
Sbjct: 293 SPRHRSAPELHGIYIINVQCQFCEYDVCMDPAKTLIEFQNWDTLLICIQEGVK 345
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 118/277 (42%), Gaps = 63/277 (22%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1159 VDVSSGQAESLAVKIHNILFPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTGENGKAGGN 1218
Query: 1185 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L V +DQHAA ER+RLE+L R K+LS + L E+ + E
Sbjct: 1219 LLVLVDQHAAHERVRLEQLIIDSYEKQQPQGSGRKKLLS------STLIPPLEVTVTEEQ 1272
Query: 1230 YQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1289
+LL + +I G + +++ LQ I +
Sbjct: 1273 RRLLSIIS--TPSLSLALSILNTGKSTSTQSIICLQEFIR------------------EQ 1312
Query: 1290 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1349
+E LQ G T P +V +VL S+AC GAI F D L E ++ L L FQC
Sbjct: 1313 VELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSREESCHLISALSWCQLPFQC 1370
Query: 1350 AHGRPTTVPLVNLEALHKQ------IAQLNNSSELWH 1380
AHGRP+ +PL +++ L ++ + +L ++ WH
Sbjct: 1371 AHGRPSMLPLADIDHLEQEKQIKPNLVKLRKMAQAWH 1407
>gi|443244709|ref|YP_007377934.1| DNA mismatch repair protein [Nonlabens dokdonensis DSW-6]
gi|442802108|gb|AGC77913.1| DNA mismatch repair protein [Nonlabens dokdonensis DSW-6]
Length = 610
Score = 157 bits (396), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 185/379 (48%), Gaps = 28/379 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGAT+V + V V+V+D+G G
Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATQVQLIVKNAGKTLVQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK +++ DD + T GFRGEALAS++ VS + + +K
Sbjct: 65 MSMTDARMAFERHATSK---ISNADDLFNLHTKGFRGEALASVAAVSQISVKSKRQEDDL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++GSK + GT + R+LFYN P RRK+++S + L ++ R
Sbjct: 122 GTLLEIEGSKVTKQ--EPVVSSQGTMISVRNLFYNVPARRKFLKSDQVE-LRNITDEFHR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+A+VHP+V+ F D L S+ ++S G + L V + I G
Sbjct: 179 VAMVHPEVAMSF---SHNDNSLFNLIKSTHRQRIVSIMGGKTNEKLVPVEEETELMSIKG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
YI P + + QY ++N R++ H LNH S A +G LK K
Sbjct: 236 YIGKPEFARKTRGLQYFFVNGRFIK----HNYLNHAVLS--------AFDGLLKEK---- 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
+ PAY L L P D+ P KT V F D + A + +++ A + + +S D
Sbjct: 280 -SNPAYFLYLTVPRDSVDINIHPTKTEVKFDDEHSLYAILRASVKHA-LGQFTINSIDFH 337
Query: 363 MLEDAELPLESSRFQSHQS 381
+ E+P E ++ ++ S
Sbjct: 338 QEKQYEVPYEVAKNKTSNS 356
>gi|366162303|ref|ZP_09462058.1| DNA mismatch repair protein MutL [Acetivibrio cellulolyticus CD2]
Length = 725
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 181/360 (50%), Gaps = 38/360 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
MG I L E N + +G V+ VV+ELV NS+DAG++ + + + GV +KVV
Sbjct: 1 MGKIVILDENTSNQIAAGEVVERPASVVKELVENSIDAGSSNISIEINNGGVS--LIKVV 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI D + + ERH+TSK+ DD I T GFRGEALASI+ VSL+E+ ++
Sbjct: 59 DNGNGIDEDDVEIAFERHSTSKIRR---ADDLESISTLGFRGEALASIASVSLVELTSRI 115
Query: 118 HGRPNG-YRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
R G Y K+ G I + R+ VGTT + RDLFYN P R K+++ +
Sbjct: 116 KDRQYGKYIKIQGGI------IKEVRQTGCPVGTTFIVRDLFYNTPARFKFLKKDTTEAG 169
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
+ + V RIAL + ++S K I+ + + ++ T ++ L+ + S +G E + EV
Sbjct: 170 Y-ISDMVNRIALGNQQISMKLIN--NRNSVIHTPGNNDLLSAIFSIYGKETAKEVLEVKY 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
D +EI GY+ P + + + +Q +YIN RYV I ++ ++
Sbjct: 227 QDEKIEIYGYVGKPEIARANRNYQSIYINGRYVKNKTISSAIDEAYKTY----------- 275
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
LK K +L++R D+ P K V F D + + A+ +A + K
Sbjct: 276 LLKNK------FAFVVLHIRINPLFVDVNVHPTKMEVRFSDEPAIFKAVYHAVNNALLSK 329
Score = 57.0 bits (136), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 25/205 (12%)
Query: 1163 LEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQE 1222
L+ AK++ Q +I + G L +IDQHAA ERI E L+ K E + YL +
Sbjct: 533 LQAAKIIGQAFSTYILLQDGDNLILIDQHAAHERIMFEALKKKYKRNESLA-QYLLSSVV 591
Query: 1223 LVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV 1282
+ L ++++ E++ G+ +F N I L ++P
Sbjct: 592 IELTNQEVKIIEENREKLNRLGF-------AFENFGNN---------SIILRSIPVALAD 635
Query: 1283 NLSD----VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1338
N S +D+L+FL + ++ RV AC+ A+ L E I++
Sbjct: 636 NASVKETFLDILDFLMSDKRKENILIEEEALYRV----ACKSAVKANKRLDDIEIKKIIK 691
Query: 1339 ELKQTSLCFQCAHGRPTTVPLVNLE 1363
+L + C HGRPT + + E
Sbjct: 692 DLSNIENPYTCPHGRPTLIKITKYE 716
>gi|296215528|ref|XP_002754163.1| PREDICTED: DNA mismatch repair protein Mlh3 [Callithrix jacchus]
Length = 1456
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 181/351 (51%), Gaps = 14/351 (3%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSAEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRYFTSKCHSVQDLENPR---FYGFRGEALASIADMASTVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQNGKALKACEADVTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E++
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPRTKDVCSRFCQIYGLGKSQKLREISFKYKEFELN 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK- 298
GYISS ++ K Q++++N R + + +HKL++ L S C ++N +
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLILRTKLHKLIDFLLRKESIICKPKNGSSNRQMNSSP 294
Query: 299 --RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 RPRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLYCIQEGVK 345
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1161 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTNTEENGKAGGN 1220
Query: 1185 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1235
L V +DQHAA ER+RLE+L + G G+ + L E+ + E +LL+
Sbjct: 1221 LLVLVDQHAAHERVRLEQLINDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLRC 1280
Query: 1236 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1284
+ + ++D G + + S S + N L+R + +T V
Sbjct: 1281 YHKNLEDLG-LEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTRSMVEEFIR--- 1336
Query: 1285 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1344
+ +E LQ G P +V +VL S+AC GA+ F D L E ++E L
Sbjct: 1337 ---EQVELLQTTGGIQG--ILPLTVQKVLASQACHGAVKFNDGLSLEESCRLIEALSLCQ 1391
Query: 1345 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1392
L FQCAHGRP+ +PL +++ L ++ + +L ++ W + E +++
Sbjct: 1392 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1445
>gi|224084115|ref|XP_002307216.1| predicted protein [Populus trichocarpa]
gi|222856665|gb|EEE94212.1| predicted protein [Populus trichocarpa]
Length = 123
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/100 (74%), Positives = 86/100 (86%)
Query: 1125 NNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGT 1184
N+N S ++ +Q NILDISSG LHL G +P+SI+K CL+DA+VL QVDKKFIP+VAGGT
Sbjct: 1 NHNTSSNVGSQRNILDISSGFLHLAGNLLVPESIHKKCLQDARVLHQVDKKFIPIVAGGT 60
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV 1224
LAVIDQHAADERIRLEELR KVLSGE K+V YLDAEQEL+
Sbjct: 61 LAVIDQHAADERIRLEELRQKVLSGEEKTVTYLDAEQELL 100
Score = 46.6 bits (109), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 22/24 (91%)
Query: 1296 LADTDGSSTTPPSVLRVLNSKACR 1319
L+DTDGSST PPSVLRVLN KACR
Sbjct: 100 LSDTDGSSTLPPSVLRVLNYKACR 123
>gi|426233684|ref|XP_004010845.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 2 [Ovis aries]
Length = 1439
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 199/393 (50%), Gaps = 24/393 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSAEVQAKLRSGLAVCSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRYFTSKCNSVQDLENPR---FYGFRGEALASIADMASAVEISSKKNKSMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQNGKALKACEAALTRPSTGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E+N E++
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREINFKYKEFELT 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGF 294
G+ISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 237 GFISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQMNSS- 293
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK- 353
RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++ ++KK
Sbjct: 294 -PRPRSNPELQGIYVINVQCQFCEYDVCLEPAKTLIEFQNWDTLLVCIQEGVK-MFLKKE 351
Query: 354 ---IAHDSFDV-DMLEDAELPLESSRFQSHQSS 382
+ S D+ + ED + L S+ Q SS
Sbjct: 352 KLFVELSSEDIKEFSEDNDFSLFSASLQKQVSS 384
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1194
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1160 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1219
Query: 1195 ERIRLEEL-RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGW-ICNIHTQ 1252
E+ + + R K+LS + + E+ + E +LL+ + + ++D G I T
Sbjct: 1220 EKQQPQGFGRKKLLS------SIVSPPLEITVTEEQRRLLRCYHKNLEDLGLEIVFPDTS 1273
Query: 1253 GSRSF---------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSS 1303
S + N L+R + +T V + +E LQ G
Sbjct: 1274 DSLVLIGKVPLCFVEREANELRRGRSTVTKGIVEEFIR------EQVELLQTTGGIQG-- 1325
Query: 1304 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL N++
Sbjct: 1326 TLPLTVQKVLASQACHGAIKFNDGLSFEESCRLIEALSWCQLPFQCAHGRPSMLPLANID 1385
Query: 1364 ALHKQ------IAQLNNSSELWHGLHRGE 1386
L ++ +A+L ++ WH +GE
Sbjct: 1386 HLEQEKQTKPNLAKLRRMAQAWHLFGKGE 1414
>gi|426233682|ref|XP_004010844.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 1 [Ovis aries]
Length = 1463
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 199/393 (50%), Gaps = 24/393 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSAEVQAKLRSGLAVCSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVDKVGNRYFTSKCNSVQDLENPR---FYGFRGEALASIADMASAVEISSKKNKSMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQNGKALKACEAALTRPSTGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E+N E++
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREINFKYKEFELT 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGF 294
G+ISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 237 GFISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQMNSS- 293
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK- 353
RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++ ++KK
Sbjct: 294 -PRPRSNPELQGIYVINVQCQFCEYDVCLEPAKTLIEFQNWDTLLVCIQEGVK-MFLKKE 351
Query: 354 ---IAHDSFDV-DMLEDAELPLESSRFQSHQSS 382
+ S D+ + ED + L S+ Q SS
Sbjct: 352 KLFVELSSEDIKEFSEDNDFSLFSASLQKQVSS 384
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 131/293 (44%), Gaps = 59/293 (20%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1160 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1219
Query: 1185 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L V +DQHAA ER+RLE+L R K+LS + + E+ + E
Sbjct: 1220 LLVLVDQHAAHERVRLEQLIIDSYEKQQPQGFGRKKLLS------SIVSPPLEITVTEEQ 1273
Query: 1230 YQLLQNFAEQIKDWGW-ICNIHTQGSRSF---------NKNLNLLQRQITVITLLAVPCI 1279
+LL+ + + ++D G I T S + N L+R + +T V
Sbjct: 1274 RRLLRCYHKNLEDLGLEIVFPDTSDSLVLIGKVPLCFVEREANELRRGRSTVTKGIVEEF 1333
Query: 1280 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1339
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E
Sbjct: 1334 IR------EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSFEESCRLIEA 1385
Query: 1340 LKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1386
L L FQCAHGRP+ +PL N++ L ++ +A+L ++ WH +GE
Sbjct: 1386 LSWCQLPFQCAHGRPSMLPLANIDHLEQEKQTKPNLAKLRRMAQAWHLFGKGE 1438
>gi|348573386|ref|XP_003472472.1| PREDICTED: DNA mismatch repair protein Mlh3-like isoform 2 [Cavia
porcellus]
Length = 1431
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 179/351 (50%), Gaps = 14/351 (3%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V + V + V+VVD+G G+
Sbjct: 2 IKCLSVEVKAKLRSGLAINSLGQCVEELALNSIDAEAKCVAIRVNMETFQVQVVDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D++ +GFRGEALASI+D+ S +EI +K +G
Sbjct: 62 GSDDIDKVGNRYFTSKCHSVQDLESPR---FYGFRGEALASIADMASAVEISSKTNGTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK + P+ V++ V
Sbjct: 119 TFVKLFQNGKALKACEADLTRPSAGTTVTVCNLFYQLPVRRKCL--DPRLEFEKVRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDGSGSMVLQLPKTKDICSRFCQIYGLGKSQKLKEIHFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK- 298
GYISS ++ K Q++++N R V + +HKL++ L S C + +
Sbjct: 237 GYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICKPKIGCASRQMNSSS 294
Query: 299 --RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS + Y++N++C YD+ +P KT + F++W+ +L ++ ++
Sbjct: 295 RHRSTPELHGIYVVNVQCQFCEYDVCLEPAKTLIEFQNWDTLLICVQEGVK 345
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 116/269 (43%), Gaps = 35/269 (13%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1194
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1159 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENSEGDSY 1218
Query: 1195 ERIRLEEL-RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNI-HTQ 1252
E+ + + R K+LS + + E+ + + +LL + + ++D G HT
Sbjct: 1219 EKQQPQGCGRKKLLS------STIIPPLEITVTKEQRRLLGCYHKNLEDLGLEFTFPHTS 1272
Query: 1253 GSRSF---------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSS 1303
S + N L+R + +T V + +E LQ G
Sbjct: 1273 DSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR------EQVELLQTTGGIQG-- 1324
Query: 1304 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
T P +V +VL S+AC GAI F D L P E ++E L L FQCAHGRP+ +PL +L+
Sbjct: 1325 TLPLTVQKVLASQACHGAIKFNDHLSPEESYRLIEALSWCQLPFQCAHGRPSMLPLADLD 1384
Query: 1364 AL--HKQI----AQLNNSSELWHGLHRGE 1386
L KQI A+L ++ W + E
Sbjct: 1385 HLEHEKQIKPNLAKLRKMAQAWRLFGKAE 1413
>gi|390601117|gb|EIN10511.1| hypothetical protein PUNSTDRAFT_125326 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 861
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 183/371 (49%), Gaps = 33/371 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGV--CNCYVKVVD 58
+ T+ LP R ++RS +L L ++V EL+ NS+DAG++ + V V +C+VK D
Sbjct: 11 LPTLQGLPAPTRTSLRSTQILTSLPQIVSELLQNSLDAGSSHIEVGVNCEEWSCWVK--D 68
Query: 59 DGSGISRDGLVLLGE-----RHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEI 113
DG+GI +DGL L E R+ TSK D++ + TFGFRGEALAS ++VS LE+
Sbjct: 69 DGTGIPKDGLRKLAECSEQRRYHTSK---AYDLNSLIDVSTFGFRGEALASAAEVSCLEV 125
Query: 114 ITKAHGRPNGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKK 171
++ + + ++KG LY G + R+ GT V RD F+N PVRR ++P K
Sbjct: 126 ASRTNVSRECWSILVKGPNILYDGPSVRWRRETQGTVVCIRDAFFNIPVRRS-SHTAPGK 184
Query: 172 VLHSVKKCVLRIALVHPKVSFKFIDM---------ESEDELLCTCSSSSPLALLISSFGI 222
L ++++ + AL+ P VSF D + L+ ++S +A FG
Sbjct: 185 TLETIQRDIETYALMFPGVSFTLEDTNNRGASSTSRTTKRLMAIPKTTSTVASFRHMFGR 244
Query: 223 EDFSFLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 282
++E+N G + + G+IS + K++Q++Y+N + +G +H ++ +
Sbjct: 245 ALAEHVEEINVTSGDMALKGFIS--LEGALGKSYQFLYLNQHPIAQGGLHHVIESQFTAS 302
Query: 283 DCSDSWKANNGFLKGKRSKSQACP-------AYLLNLRCPHSLYDLTFDPLKTHVVFKDW 335
+ +G RS S+ P Y L+L + D +P K V F
Sbjct: 303 SFGKNAYDESGATSLPRSTSRRSPRKAQRHAVYCLDLTISRAHVDNVLEPAKVTVHFATD 362
Query: 336 EPVLAFIERAI 346
E V F+ AI
Sbjct: 363 EAVSTFLRDAI 373
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 51/255 (20%)
Query: 1154 IPDSINKSCLEDAKVLQQVDKKFIPVVAGG--------TLAVIDQHAADERIRLEE---- 1201
I ++ L A+VL QVD+KFI + +L ++DQHAADER+R+E
Sbjct: 587 ISQQLSAGQLARARVLGQVDRKFIACLLDAEADTRTEISLFLVDQHAADERVRVEHFLEE 646
Query: 1202 -----LRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQN---FAEQIKDWGW-ICNIHTQ 1252
LR+ + +G V LD + ++L + + A+ + WG+ I ++ Q
Sbjct: 647 LCQGYLRYDPATSQGVEVLPLDPPERVLLTQHEASVFARSAYIAKAFERWGFHITSVSEQ 706
Query: 1253 GSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLE-----FLQQLAD----TDGSS 1303
S + + + Q + + VP I G ++ + L+ ++ QL G
Sbjct: 707 DSSTSSLGKDYCQ-----VVVHTVPLIVGQKVTQGNQLQEFVKTYIAQLTSEGEFASGPQ 761
Query: 1304 TT----------------PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1347
T P ++L ++NSKACRGAIMF D L +C ++E+L + F
Sbjct: 762 TAEDPADEGSWQSALRWMPGALLEMVNSKACRGAIMFNDPLKKEQCERLIEQLSTKAFPF 821
Query: 1348 QCAHGRPTTVPLVNL 1362
QCAHGRP+ PL+ +
Sbjct: 822 QCAHGRPSVAPLMTI 836
>gi|348573384|ref|XP_003472471.1| PREDICTED: DNA mismatch repair protein Mlh3-like isoform 1 [Cavia
porcellus]
Length = 1455
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 179/351 (50%), Gaps = 14/351 (3%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V + V + V+VVD+G G+
Sbjct: 2 IKCLSVEVKAKLRSGLAINSLGQCVEELALNSIDAEAKCVAIRVNMETFQVQVVDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D++ +GFRGEALASI+D+ S +EI +K +G
Sbjct: 62 GSDDIDKVGNRYFTSKCHSVQDLESPR---FYGFRGEALASIADMASAVEISSKTNGTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK + P+ V++ V
Sbjct: 119 TFVKLFQNGKALKACEADLTRPSAGTTVTVCNLFYQLPVRRKCL--DPRLEFEKVRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDGSGSMVLQLPKTKDICSRFCQIYGLGKSQKLKEIHFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK- 298
GYISS ++ K Q++++N R V + +HKL++ L S C + +
Sbjct: 237 GYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICKPKIGCASRQMNSSS 294
Query: 299 --RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS + Y++N++C YD+ +P KT + F++W+ +L ++ ++
Sbjct: 295 RHRSTPELHGIYVVNVQCQFCEYDVCLEPAKTLIEFQNWDTLLICVQEGVK 345
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 127/293 (43%), Gaps = 59/293 (20%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV-----------AGG 1183
+D+SSG L P K + +VLQQVD KFI + G
Sbjct: 1159 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENSEGGGN 1218
Query: 1184 TLAVIDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L ++DQHAA ERIRLE+L R K+LS + + E+ + +
Sbjct: 1219 LLILVDQHAAHERIRLEQLIADSYEKQQPQGCGRKKLLS------STIIPPLEITVTKEQ 1272
Query: 1230 YQLLQNFAEQIKDWGWICNI-HTQGSRSF---------NKNLNLLQRQITVITLLAVPCI 1279
+LL + + ++D G HT S + N L+R + +T V
Sbjct: 1273 RRLLGCYHKNLEDLGLEFTFPHTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEF 1332
Query: 1280 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1339
+ +E LQ G T P +V +VL S+AC GAI F D L P E ++E
Sbjct: 1333 IR------EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDHLSPEESYRLIEA 1384
Query: 1340 LKQTSLCFQCAHGRPTTVPLVNLEAL--HKQI----AQLNNSSELWHGLHRGE 1386
L L FQCAHGRP+ +PL +L+ L KQI A+L ++ W + E
Sbjct: 1385 LSWCQLPFQCAHGRPSMLPLADLDHLEHEKQIKPNLAKLRKMAQAWRLFGKAE 1437
>gi|348573388|ref|XP_003472473.1| PREDICTED: DNA mismatch repair protein Mlh3-like isoform 3 [Cavia
porcellus]
Length = 1422
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 179/351 (50%), Gaps = 14/351 (3%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V + V + V+VVD+G G+
Sbjct: 2 IKCLSVEVKAKLRSGLAINSLGQCVEELALNSIDAEAKCVAIRVNMETFQVQVVDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D++ +GFRGEALASI+D+ S +EI +K +G
Sbjct: 62 GSDDIDKVGNRYFTSKCHSVQDLESPR---FYGFRGEALASIADMASAVEISSKTNGTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK + P+ V++ V
Sbjct: 119 TFVKLFQNGKALKACEADLTRPSAGTTVTVCNLFYQLPVRRKCL--DPRLEFEKVRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDGSGSMVLQLPKTKDICSRFCQIYGLGKSQKLKEIHFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK- 298
GYISS ++ K Q++++N R V + +HKL++ L S C + +
Sbjct: 237 GYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICKPKIGCASRQMNSSS 294
Query: 299 --RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS + Y++N++C YD+ +P KT + F++W+ +L ++ ++
Sbjct: 295 RHRSTPELHGIYVVNVQCQFCEYDVCLEPAKTLIEFQNWDTLLICVQEGVK 345
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 127/293 (43%), Gaps = 59/293 (20%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV-----------AGG 1183
+D+SSG L P K + +VLQQVD KFI + G
Sbjct: 1126 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENSEGGGN 1185
Query: 1184 TLAVIDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L ++DQHAA ERIRLE+L R K+LS + + E+ + +
Sbjct: 1186 LLILVDQHAAHERIRLEQLIADSYEKQQPQGCGRKKLLS------STIIPPLEITVTKEQ 1239
Query: 1230 YQLLQNFAEQIKDWGWICNI-HTQGSRSF---------NKNLNLLQRQITVITLLAVPCI 1279
+LL + + ++D G HT S + N L+R + +T V
Sbjct: 1240 RRLLGCYHKNLEDLGLEFTFPHTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEF 1299
Query: 1280 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1339
+ +E LQ G T P +V +VL S+AC GAI F D L P E ++E
Sbjct: 1300 IR------EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDHLSPEESYRLIEA 1351
Query: 1340 LKQTSLCFQCAHGRPTTVPLVNLEAL--HKQI----AQLNNSSELWHGLHRGE 1386
L L FQCAHGRP+ +PL +L+ L KQI A+L ++ W + E
Sbjct: 1352 LSWCQLPFQCAHGRPSMLPLADLDHLEHEKQIKPNLAKLRKMAQAWRLFGKAE 1404
>gi|291542655|emb|CBL15765.1| DNA mismatch repair protein MutL [Ruminococcus bromii L2-63]
Length = 705
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 178/353 (50%), Gaps = 26/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
MG IN L + V + +G V+ V++ELV NS+DAGA + V + +++V DD
Sbjct: 1 MGVINVLDKHVAELIAAGEVVERPASVIKELVENSIDAGAKNITVEIKNGGTTFMRVADD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI RD + + RHATSK+ +D+D I T GFRGEALASI VS L++IT+
Sbjct: 61 GCGIYRDDIKVAFLRHATSKVKVESDLD---SISTLGFRGEALASICAVSRLQLITRNVN 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + G + DD VGTT V RDLFYN P R K+++ + ++V
Sbjct: 118 EEIGTSYEIDGGE--EQSFDDAGCPVGTTFVIRDLFYNIPARAKFLKKDVSE-GNAVSNI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ + AL HP+++F +I + ++L T ++ + S FG + L V+ A++
Sbjct: 175 IDKTALSHPEIAFTYI--KDGKQVLRTFGDGKLISAIYSVFGKDFAKGLIPVDYQLDAIK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ GYIS P S + Q +IN RY+ A +++K + + GK
Sbjct: 233 VYGYISKPEHSRPNRNMQNFFINGRYI---------KTRTAMVALEEAFKGS--IMVGK- 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P+ +LN+ P + D+ P K V F + PV I A++S+ MK
Sbjct: 281 -----FPSCVLNIELPCEMIDVNVHPSKLEVRFINERPVFDAIYHAVKSSLMK 328
>gi|197100348|ref|NP_001124874.1| DNA mismatch repair protein Mlh3 [Pongo abelii]
gi|55726207|emb|CAH89876.1| hypothetical protein [Pongo abelii]
Length = 1273
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 181/353 (51%), Gaps = 18/353 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREISFKYKEFELG 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGF 294
GYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGSTSRQMNSSL 294
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS + Y++N++C YD+ +P KT + F+DW+ +L I+ ++
Sbjct: 295 --RHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQDWDTLLFCIQEGVK 345
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 1290 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1349
+E LQ G T P +V +VL S+AC GAI F D L E ++E L L FQC
Sbjct: 1158 VELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQC 1215
Query: 1350 AHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1392
AHGRP+ +PL +++ L ++ + +L+ ++ W + E +++
Sbjct: 1216 AHGRPSMLPLADIDHLEQEKQIKPNLTKLHKMAQAWRLFGKAECDARQS 1264
>gi|332223313|ref|XP_003260811.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 2 [Nomascus
leucogenys]
Length = 1429
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 182/353 (51%), Gaps = 18/353 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGF 294
GYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLVDFLLRKESIICKPKNGSTSRQMNSSL 294
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 --RHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 37/264 (14%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1194
+D+SSG L P K + +VLQQVD KFI + + + +
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKIEENGEADSY 1217
Query: 1195 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1253
E+ + + R K+LS + L E+ + E +LL + + ++D G + +
Sbjct: 1218 EKHQAQGSGRKKLLS------STLIPPLEITVTEEQRRLLWCYHKNLEDLG-LEFVFPDT 1270
Query: 1254 SRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGS 1302
S S + N L+R + +T V + +E LQ G
Sbjct: 1271 SDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR------EQVELLQTTGGIQG- 1323
Query: 1303 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1362
T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL ++
Sbjct: 1324 -TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADI 1382
Query: 1363 EALHKQ------IAQLNNSSELWH 1380
+ L ++ +A+L ++ W
Sbjct: 1383 DHLEQEKQIKPNLAKLRKMAQAWR 1406
>gi|397507484|ref|XP_003824225.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3
[Pan paniscus]
Length = 1451
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 16/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSTVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFL 295
GYISS ++ K Q++++N R V + +HKL++ L S C + + N L
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSL 294
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 R-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 130/301 (43%), Gaps = 63/301 (20%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1156 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1215
Query: 1185 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1235
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1216 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1275
Query: 1236 FAEQIKDWGW------------------ICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1277
+ + ++D G +C + + N L+R + +T V
Sbjct: 1276 YHKNLEDLGLEFAFPDTSDSLVLVGKVPLCFVEREA--------NELRRGRSTVTKSIVE 1327
Query: 1278 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1337
+ LE LQ G T P +V +VL S+AC GAI F D L E ++
Sbjct: 1328 EFIR------EQLELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLI 1379
Query: 1338 EELKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKR 1391
E L L FQCAHGRP+ +PL +++ L ++ + +L ++ WH + E ++
Sbjct: 1380 EALSSCQLPFQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWHLFGKAECDTRQ 1439
Query: 1392 A 1392
+
Sbjct: 1440 S 1440
>gi|114653982|ref|XP_001158557.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 4 [Pan
troglodytes]
gi|410335099|gb|JAA36496.1| mutL homolog 3 [Pan troglodytes]
Length = 1427
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 16/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFL 295
GYISS ++ K Q++++N R V + +HKL++ L S C + + N L
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSL 294
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 R-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 118/283 (41%), Gaps = 51/283 (18%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1194
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1156 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1215
Query: 1195 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGW-------- 1245
E+ + + R K+LS + L E+ + E +LL + + ++D G
Sbjct: 1216 EKQQAQGSGRKKLLS------STLIPPLEITVTEEQRRLLWCYHKNLEDLGLEFAFPDTS 1269
Query: 1246 ----------ICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQ 1295
+C + + N L+R + +T V + LE LQ
Sbjct: 1270 DSLVLVGKVPLCFVEREA--------NELRRGRSTVTKSIVEEFIR------EQLELLQT 1315
Query: 1296 LADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1355
G T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+
Sbjct: 1316 TGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPS 1373
Query: 1356 TVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1392
+PL +++ L ++ + +L ++ WH + E +++
Sbjct: 1374 MLPLADIDHLEQEKQIKPNLTKLRKMAQAWHLFGKAECDTRQS 1416
>gi|332223311|ref|XP_003260810.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 1 [Nomascus
leucogenys]
Length = 1453
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 182/353 (51%), Gaps = 18/353 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGF 294
GYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLVDFLLRKESIICKPKNGSTSRQMNSSL 294
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 --RHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 128/283 (45%), Gaps = 51/283 (18%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKIEENGEAGGN 1217
Query: 1185 LAV-IDQHAADERIRLEEL------RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQ 1234
L V +DQHAA ERIRLE+L +H+ G G+ + L E+ + E +LL
Sbjct: 1218 LLVLVDQHAAHERIRLEQLIIDSYEKHQA-QGSGRKKLLSSTLIPPLEITVTEEQRRLLW 1276
Query: 1235 NFAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVN 1283
+ + ++D G + + S S + N L+R + +T V
Sbjct: 1277 CYHKNLEDLG-LEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR-- 1333
Query: 1284 LSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1343
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1334 ----EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSC 1387
Query: 1344 SLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWH 1380
L FQCAHGRP+ +PL +++ L ++ +A+L ++ W
Sbjct: 1388 QLPFQCAHGRPSMLPLADIDHLEQEKQIKPNLAKLRKMAQAWR 1430
>gi|114653978|ref|XP_001158621.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 5 [Pan
troglodytes]
gi|410335097|gb|JAA36495.1| mutL homolog 3 [Pan troglodytes]
Length = 1451
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 16/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFL 295
GYISS ++ K Q++++N R V + +HKL++ L S C + + N L
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSL 294
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 R-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 130/301 (43%), Gaps = 63/301 (20%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1156 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1215
Query: 1185 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1235
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1216 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1275
Query: 1236 FAEQIKDWGW------------------ICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1277
+ + ++D G +C + + N L+R + +T V
Sbjct: 1276 YHKNLEDLGLEFAFPDTSDSLVLVGKVPLCFVEREA--------NELRRGRSTVTKSIVE 1327
Query: 1278 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1337
+ LE LQ G T P +V +VL S+AC GAI F D L E ++
Sbjct: 1328 EFIR------EQLELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLI 1379
Query: 1338 EELKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKR 1391
E L L FQCAHGRP+ +PL +++ L ++ + +L ++ WH + E ++
Sbjct: 1380 EALSSCQLPFQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWHLFGKAECDTRQ 1439
Query: 1392 A 1392
+
Sbjct: 1440 S 1440
>gi|62003157|gb|AAX59030.1| mutL 3 homolog (E.coli) [Homo sapiens]
Length = 1429
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 16/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFL 295
GYISS ++ K Q++++N R V + +HKL++ L S C + + N L
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSL 294
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 R-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 37/276 (13%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1194
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1217
Query: 1195 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1253
E+ + + R K+LS + L E+ + E +LL + + ++D G + +
Sbjct: 1218 EKQQAQGSGRKKLLS------STLIPPLEITVTEEQRRLLWCYHKNLEDLG-LEFVFPDT 1270
Query: 1254 SRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGS 1302
S S + N L+R + +T V + LE LQ G
Sbjct: 1271 SDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR------EQLELLQTTGGIQG- 1323
Query: 1303 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1362
T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL ++
Sbjct: 1324 -TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADI 1382
Query: 1363 EALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1392
+ L ++ + +L ++ W + E +++
Sbjct: 1383 DHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1418
>gi|91992160|ref|NP_055196.2| DNA mismatch repair protein Mlh3 isoform 2 [Homo sapiens]
Length = 1429
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 16/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFL 295
GYISS ++ K Q++++N R V + +HKL++ L S C + + N L
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSL 294
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 R-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 37/276 (13%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1194
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1217
Query: 1195 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1253
E+ + + R K+LS + L E+ + E +LL + + ++D G + +
Sbjct: 1218 EKQQAQGSGRKKLLS------STLIPPLEITVTEEQRRLLWCYHKNLEDLG-LEFVFPDT 1270
Query: 1254 SRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGS 1302
S S + N L+R + +T V + LE LQ G
Sbjct: 1271 SDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR------EQLELLQTTGGIQG- 1323
Query: 1303 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1362
T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL ++
Sbjct: 1324 -TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADI 1382
Query: 1363 EALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1392
+ L ++ + +L ++ W + E +++
Sbjct: 1383 DHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1418
>gi|7209866|dbj|BAA92353.1| DNA mismatch repair protein MLH3 [Homo sapiens]
Length = 1453
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 16/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFL 295
GYISS ++ K Q++++N R V + +HKL++ L S C + + N L
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSL 294
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 R-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 1185 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1235
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1218 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1277
Query: 1236 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1284
+ + ++D G + + S S + N L+R + +T V
Sbjct: 1278 YHKNLEDLG-LEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR--- 1333
Query: 1285 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1344
+ LE LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1334 ---EQLELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQ 1388
Query: 1345 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1392
L FQCAHGRP+ +PL +++ L ++ + +L ++ W + E +++
Sbjct: 1389 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1442
>gi|91992162|ref|NP_001035197.1| DNA mismatch repair protein Mlh3 isoform 1 [Homo sapiens]
gi|317373417|sp|Q9UHC1.3|MLH3_HUMAN RecName: Full=DNA mismatch repair protein Mlh3; AltName: Full=MutL
protein homolog 3
Length = 1453
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 16/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFL 295
GYISS ++ K Q++++N R V + +HKL++ L S C + + N L
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSL 294
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 R-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 1185 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1235
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1218 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1277
Query: 1236 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1284
+ + ++D G + + S S + N L+R + +T V
Sbjct: 1278 YHKNLEDLG-LEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR--- 1333
Query: 1285 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1344
+ LE LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1334 ---EQLELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQ 1388
Query: 1345 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1392
L FQCAHGRP+ +PL +++ L ++ + +L ++ W + E +++
Sbjct: 1389 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1442
>gi|6689930|gb|AAF23905.1| DNA mismatch repair protein [Homo sapiens]
gi|85567604|gb|AAI12168.1| MutL homolog 3 (E. coli) [Homo sapiens]
gi|119601619|gb|EAW81213.1| mutL homolog 3 (E. coli), isoform CRA_c [Homo sapiens]
gi|119601620|gb|EAW81214.1| mutL homolog 3 (E. coli), isoform CRA_c [Homo sapiens]
gi|313883808|gb|ADR83390.1| mutL homolog 3 (E. coli) [synthetic construct]
Length = 1429
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 16/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFL 295
GYISS ++ K Q++++N R V + +HKL++ L S C + + N L
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSL 294
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 R-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 37/276 (13%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1194
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1217
Query: 1195 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1253
E+ + + R K+LS + L E+ + E +LL + + ++D G + +
Sbjct: 1218 EKQQAQGSGRKKLLS------STLIPPLEITVTEEQRRLLWCYHKNLEDLG-LEFVFPDT 1270
Query: 1254 SRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGS 1302
S S + N L+R + +T V + LE LQ G
Sbjct: 1271 SDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR------EQLELLQTTGGIQG- 1323
Query: 1303 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1362
T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL ++
Sbjct: 1324 -TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADI 1382
Query: 1363 EALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1392
+ L ++ + +L ++ W + E +++
Sbjct: 1383 DHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1418
>gi|119601617|gb|EAW81211.1| mutL homolog 3 (E. coli), isoform CRA_a [Homo sapiens]
Length = 1445
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 16/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFL 295
GYISS ++ K Q++++N R V + +HKL++ L S C + + N L
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSL 294
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 R-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 97.1 bits (240), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 128/292 (43%), Gaps = 53/292 (18%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 1185 LAV-IDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDW 1243
L V +DQHAA ERIRLE+L ++ K A ++L+ + L E+ +
Sbjct: 1218 LLVLVDQHAAHERIRLEQL---IIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRL 1274
Query: 1244 GWICNIHTQGSRSFNKNLNLLQRQI-------TVITLLAVPCIF----------GVNLSD 1286
W ++KNL L + +++ + VP F G +
Sbjct: 1275 LWC----------YHKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVT 1324
Query: 1287 VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1346
++E LQ G T P +V +VL S+AC GAI F D L E ++E L L
Sbjct: 1325 KSIVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLP 1382
Query: 1347 FQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1392
FQCAHGRP+ +PL +++ L ++ + +L ++ W + E +++
Sbjct: 1383 FQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1434
>gi|6689928|gb|AAF23904.1|AF195657_1 DNA mismatch repair protein [Homo sapiens]
Length = 1429
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 16/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFL 295
GYISS ++ K Q++++N R V + +HKL++ L S C + + N L
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSL 294
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 R-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 37/276 (13%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAAD 1194
+D+SSG L P K + +VLQQVD KFI + + +
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEADSY 1217
Query: 1195 ERIRLE-ELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQG 1253
E+ + + R K+LS + L E+ + E +LL + + ++D G + +
Sbjct: 1218 EKQQAQGSGRKKLLS------STLIPPLEITVTEEQRRLLWCYHKNLEDLG-LEFVFPDT 1270
Query: 1254 SRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGS 1302
S S + N L+R + +T V + LE LQ G
Sbjct: 1271 SDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR------EQLELLQTTGGIQG- 1323
Query: 1303 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1362
T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+ +PL ++
Sbjct: 1324 -TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADI 1382
Query: 1363 EALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1392
+ L ++ + +L ++ W + E +++
Sbjct: 1383 DHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1418
>gi|317121912|ref|YP_004101915.1| DNA mismatch repair protein MutL [Thermaerobacter marianensis DSM
12885]
gi|315591892|gb|ADU51188.1| DNA mismatch repair protein MutL [Thermaerobacter marianensis DSM
12885]
Length = 726
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 171/354 (48%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I RL V N + +G V+ VV+ELV NS+DAGA ++ V V + V DD
Sbjct: 1 MGRIRRLDPQVINQIAAGEVVERPASVVKELVENSLDAGARRIRVDVEEGGLRSITVADD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ D +L ERHATSK+ L D+ A GT GFRGEALA+I+ V+ LE+IT+ G
Sbjct: 61 GCGMDPDDAMLAVERHATSKITRLDDLAHA---GTLGFRGEALAAIASVARLELITRPPG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G+R V++G G GT V RDLF+N P RRK+++ P +
Sbjct: 118 ADGGFRVVVEGGTA--RGAGPWASPPGTRVTVRDLFFNTPARRKHLK-GPAAEFARIADV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V AL P+V F+ + + E+L T S +++ FG + L V A DG
Sbjct: 175 VTAHALARPEVRFELV--HNGREVLRTSGSGDRAVVVLECFGPDVAGALIPVVAGDGLRR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ GY+ +P + + +A+Q+ IN R V + F ++++ L +R
Sbjct: 233 VEGYVGAPRVARASRAWQFFSINRRPVQVASLR---------FSLENAYRH---LLPARR 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P ++++ P D+ P K V V A + A++ A K+
Sbjct: 281 -----YPVAVVDVALPGEEVDVNVHPAKLEVRLVRERAVAALLYGAVQDALAKR 329
>gi|335292797|ref|XP_001926322.2| PREDICTED: DNA mismatch repair protein Mlh3 isoform 2 [Sus scrofa]
Length = 1456
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 197/386 (51%), Gaps = 24/386 (6%)
Query: 11 VRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVL 70
V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+ + +
Sbjct: 9 VQARLRSGLAICSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGIGMGSEDVDK 68
Query: 71 LGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPNGYRKVMK 129
+G R+ TSK + D+++ +GFRGEALASI+D+ S +EI ++ + + K+ +
Sbjct: 69 VGNRYFTSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSRRNKSMKTFVKLFQ 125
Query: 130 GSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHP 188
K L D R GTTV +LFY PVRRK M P+ V++ V ++L+HP
Sbjct: 126 NGKALKACEADLTRPSAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRVEALSLMHP 183
Query: 189 KVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISSPY 248
VSF + S +L + + +G+ L E+N E++G+IS+
Sbjct: 184 SVSFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREINFKYKEFELNGFISA-- 241
Query: 249 DSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGFLKGKRSK 301
++ K Q++++N R + + +HKL++ L S C S S + N G R
Sbjct: 242 EAHYNKNMQFLFVNKRLILRTKLHKLIDFLLRKESIICKPKNGSASRQMNCG--PRPRPN 299
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK----IAHD 357
+ Y++N++C YD+ +P KT + F++W+ +L I+ ++ ++KK +
Sbjct: 300 PELHGIYVINMQCQFCEYDVCLEPAKTLIEFQNWDTLLVCIQEGVK-MFLKKEKLFVELS 358
Query: 358 SFDV-DMLEDAELPLESSRFQSHQSS 382
+ D+ + ED + L S+ Q SS
Sbjct: 359 NEDIKEFSEDNDFSLFSTTLQKQVSS 384
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 132/294 (44%), Gaps = 47/294 (15%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1160 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEEDGEAGGN 1219
Query: 1185 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1235
L V +DQHAA ERIRLE+L + G G+ + ++ E+ + E +LL+
Sbjct: 1220 LLVLVDQHAAHERIRLEQLIADSYEKQQAQGSGRKKLLSSTVNPPLEIPVTEEQRRLLRC 1279
Query: 1236 FAEQIKDWGWICNIHTQGSRS----------FNKNLNLLQRQITVITLLAVPCIFGVNLS 1285
+ + ++D G R + N L+R + +T V
Sbjct: 1280 YHKNLEDLGLEIIFPDTSDRLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR---- 1335
Query: 1286 DVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
+ +E LQ G T P +V +VL S+AC GAI F DSL E ++E L L
Sbjct: 1336 --EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDSLSLEESCRLIEALSWCQL 1391
Query: 1346 CFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRAS 1393
FQCAHGRP+ +PL +++ L ++ +A+L ++ WH + E S R S
Sbjct: 1392 PFQCAHGRPSMLPLADVDHLEQEKQIKPNLAKLRRMTQAWHLFGKAEGSDTRQS 1445
>gi|395329993|gb|EJF62378.1| hypothetical protein DICSQDRAFT_58321 [Dichomitus squalens LYAD-421
SS1]
Length = 885
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 181/373 (48%), Gaps = 29/373 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I LP + + +RS +L L ++V ELV NS+DAGA + + + + V DDG+GI
Sbjct: 16 ITSLPPSTKTKLRSAQILTSLPQLVSELVQNSLDAGARNIEISIDPEDWECWVRDDGTGI 75
Query: 64 SRDGLVLLGE-----RHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 118
SRDGL +L R+ TSK + A D + FGFRGEALASI+++ LEI ++
Sbjct: 76 SRDGLAVLASGPEAGRYGTSKAYNTASSLDE--VNNFGFRGEALASIANLCCLEITSRTK 133
Query: 119 GRPNGYRKVMKGSKCLYLGIDD--ERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+ +MKG + LY G R+ GT V RD FYN P+RRK + + V V
Sbjct: 134 ESSESWTVIMKGGQTLYTGPSTRWRRETSGTVVSVRDAFYNLPIRRKAHPNCARTV-ELV 192
Query: 177 KKCVLRIALVHPKVSFKFIDME---------SEDELLCTCSSSSPLALLISSFGIEDFSF 227
+K V +ALV P + F +++ ++ LL +SS L +G +
Sbjct: 193 RKDVEALALVFPDICFAMENVQKTKDATRAKAKTRLLTVPKTSSSLLTFRHLYGKALATH 252
Query: 228 LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
++E++ + + + G++S D KA+Q++YIN + +H+ + + A
Sbjct: 253 VEEIDQSYAEMNLEGFVS--LDGAYSKAYQFLYINRHPLETCSLHRSVEGIFARTSFYKH 310
Query: 288 WKANNGFL------KGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVL 339
+ + G+RS K + P Y+LNL P D T +P K V ++
Sbjct: 311 VRRQTILMLTHLRSAGRRSPRKVEKKPVYVLNLTIPPRFIDNTVEPSKAAVQLQNSASAT 370
Query: 340 AFIERAIRSAWMK 352
AF+ + S ++
Sbjct: 371 AFLSSVVESVLIR 383
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 116/266 (43%), Gaps = 63/266 (23%)
Query: 1159 NKSCLEDAKVLQQVDKKFIPVV-----------------AGGTLAVIDQHAADERIRLEE 1201
+K L A++L QVD+KFI V GG L +IDQHAADERIR+E
Sbjct: 595 SKDDLRGARILGQVDRKFIACVFSTTTDNETEPTDIQREGGGALVLIDQHAADERIRVER 654
Query: 1202 LRHKVLSG------------EGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKD------- 1242
+ G + V + P + L AE+I
Sbjct: 655 FLRGLCEGFLSHPCRPVPIRSERDVLEGGVRTRKLDPPVQILLTGPEAERIAGSHDVRKV 714
Query: 1243 ---WGWICNIHTQGSR------SFNKNLNLLQRQITVIT-LLAVPCIFGVNLSDV----- 1287
WG ++ + S S ++ + +Q + + ++A + G L D+
Sbjct: 715 FNRWGLAFSVPSAPSTNALAADSGAEHASYVQVPVGAVPEVVADKLLTGEELRDLVRGFL 774
Query: 1288 ------DLLEFLQQLADTDGSSTT------PPSVLRVLNSKACRGAIMFGDSLLPSECAL 1335
+LE + D D S+ P ++ ++NSKACRGAIMF D+L +C
Sbjct: 775 ARLESDGILEVMSLREDDDVSNWQKALRWCPRELVELINSKACRGAIMFNDTLTFEQCKA 834
Query: 1336 IVEELKQTSLCFQCAHGRPTTVPLVN 1361
+V +L +T L FQCAHGRP+ VPLV+
Sbjct: 835 LVAKLCETDLPFQCAHGRPSLVPLVD 860
>gi|119601618|gb|EAW81212.1| mutL homolog 3 (E. coli), isoform CRA_b [Homo sapiens]
gi|119601621|gb|EAW81215.1| mutL homolog 3 (E. coli), isoform CRA_b [Homo sapiens]
Length = 1453
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 16/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFL 295
GYISS ++ K Q++++N R V + +HKL++ L S C + + N L
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSL 294
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 R-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 1185 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1235
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1218 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1277
Query: 1236 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1284
+ + ++D G + + S S + N L+R + +T V
Sbjct: 1278 YHKNLEDLG-LEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR--- 1333
Query: 1285 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1344
+ LE LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1334 ---EQLELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQ 1388
Query: 1345 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1392
L FQCAHGRP+ +PL +++ L ++ + +L ++ W + E +++
Sbjct: 1389 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1442
>gi|239623995|ref|ZP_04667026.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522026|gb|EEQ61892.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 786
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 176/354 (49%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ VV+EL+ N++DA AT V + + C ++V D+
Sbjct: 1 MANITVLDQNTINKIAAGEVIERPASVVKELLENAIDAQATAVTIEIKDGGCSMIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI++D + L RHATSK+ + D+ + + GFRGEALASI+ V+ +E+ITK
Sbjct: 61 GSGIAKDQIALAFLRHATSKIKSVEDL---FTVSSLGFRGEALASIAAVAQVELITKTSD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R ++G + G+++ GTT+++R+LFYN P R+K++++ + H V
Sbjct: 118 SLTGTRYQIEGG--MEKGLEEIGAPEGTTIIARNLFYNTPARKKFLKTPMTEGAH-VAAL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V +IAL HP +S +FI ++ L T + + L+ + FG E + L V+ ++
Sbjct: 175 VEKIALSHPDISIRFI--QNNQNKLYTSGNHNLKDLIYTVFGREIAANLLSVDFEQPGMQ 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G+I P + S + ++ +IN RY+ I K + F +
Sbjct: 233 VTGFIGKPVIARSNRNYENYFINGRYIRSNIISKAIEEAYKPFMMQHKY----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +L+ D+ P K + F D E V + +A+ A K
Sbjct: 282 ------PFTMLHFTIQPDTLDVNVHPTKMELRFSDGESVYKSVVKAVGDALAHK 329
Score = 42.7 bits (99), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 20/180 (11%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L +IDQHAA E++ L E K L ++ L L LL + E G
Sbjct: 617 LFIIDQHAAHEKV-LYEKTIKTLKTRQYDTQMVEPPIILTLNMNEELLLNKYMEYFTGMG 675
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLSDVDLLEFLQQLADTDGSS 1303
+ I G R + + VP +F + D+ L+E L L+D D S
Sbjct: 676 F--EIEPFGGREY--------------AVRGVPANLFSIAKKDL-LIEMLDGLSD-DMSV 717
Query: 1304 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
P + + S +C+ A+ S+ SE ++++L + C HGRPT + + E
Sbjct: 718 HNPDIIYEKVASMSCKAAVKGHHSMSFSEANELIDQLLGLDNPYACPHGRPTIISMSKYE 777
>gi|281351439|gb|EFB27023.1| hypothetical protein PANDA_002680 [Ailuropoda melanoleuca]
Length = 1454
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 183/361 (50%), Gaps = 23/361 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQARLRSGLAICSLGQCVEELALNSLDAEAKCVAVRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDIDKVGNRYFTSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTGK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQFPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L ++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLAKSQKLRDIKFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK- 298
GYISS ++ K Q++++N R + + +HK ++ L S C K NG +
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLILRTKLHKFIDFLLRKESIIC----KPKNGSAARQM 290
Query: 299 ------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
RS + Y++N++C YD+ +P KT + F++W+ VL I+ ++ ++K
Sbjct: 291 NSSPRHRSNPELHGIYVVNMQCRFCEYDVCMEPAKTLIEFQNWDTVLVCIQEGVK-MFLK 349
Query: 353 K 353
K
Sbjct: 350 K 350
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 47/287 (16%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L+ P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAKSLVVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 1185 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L V +DQHAA ER+RLE+L R K+LS + + E+ + E
Sbjct: 1218 LLVLVDQHAAHERVRLEQLITDSYEKQQPQGSGRKKLLS------SIVSPPLEIRVTEEQ 1271
Query: 1230 YQLLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSD 1286
+LL+ + + ++D G I T S + L ++R+ + P +
Sbjct: 1272 RRLLRCYHKNLEDLGLEIIFPDTSDSLVLVGKVPLCFVEREANELRRGRSPVTKSIVEEF 1331
Query: 1287 V-DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
+ + +E LQ G T P +V +VL S+AC GAI F D L P E ++E L L
Sbjct: 1332 IREQVELLQTTGAIQG--TLPLTVQKVLASQACHGAIKFNDGLSPEESCRLIEALSWCQL 1389
Query: 1346 CFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1386
FQCAHGRP+ +PL +++ L ++ +A+L ++ WH + E
Sbjct: 1390 PFQCAHGRPSMLPLADIDHLEEEKQIKPNLAKLRKMAQAWHLFGKAE 1436
>gi|20334706|gb|AAM16278.1| MutL-like protein 3 [Mus musculus]
Length = 338
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 180/345 (52%), Gaps = 18/345 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L + V+ +RSG + L + VEEL NS+DA AT V + V + V+V+D+G G+
Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRPN 122
+ D + +G R+ TSK + D+++ +GFRGEALASI+D++ +EI +K +
Sbjct: 62 AGDDVEKVGNRYFTSKCHSVRDLENP---AFYGFRGEALASIADMAGAVEISSKKNTTLK 118
Query: 123 GYRKVMKGSKCLYL-GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R VGTTV +LFY PVRRK M P+ V++ V
Sbjct: 119 TFVKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSM--DPRLEFEKVRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E+ E S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEFS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGF 294
GYISS ++ K Q++++N R V + +HKL++ L S C S S + N+
Sbjct: 237 GYISS--EAHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS- 293
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVL 339
RS S+ Y++N++CP YD+ +P KT + + W+ VL
Sbjct: 294 -PRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIELQSWDTVL 337
>gi|371777328|ref|ZP_09483650.1| DNA mismatch repair protein mutL [Anaerophaga sp. HS1]
Length = 623
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 192/394 (48%), Gaps = 37/394 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ VV+ELV N+VDAG+T++ V + ++++D+G G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAVDAGSTEIQVIIKDAGRTLIQIIDNGCG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ + +D I T GFRGEALASI+ V+ +E+ T+ HG
Sbjct: 65 MSETDARLAFERHATSKI---KEAEDLFSIRTMGFRGEALASIAAVAQVELKTRLHGEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + + GSK + ++ V G+ + ++LF+N P RR++++++ ++ H V +
Sbjct: 122 GTKIEIAGSKV------ESQEQVTCAPGSNFMVKNLFFNVPARRRFLKTNATELRHIVNE 175
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIAL HP ++F + E + + S+ ++ G S L V + +
Sbjct: 176 -FQRIALAHPSIAFSLVHNE---QTIFNLPPSNLRQRILGVIGTHANSMLLPVETDTSIV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+I GY+ P + QY ++N+RY+ HK + +++
Sbjct: 232 KIKGYVGKPRSARKTMGDQYFFVNNRYMRSPYFHK---AVMVAYE--------------N 274
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
++ CP Y L + D+ P KT + F+D V + A+R A K S
Sbjct: 275 LVPAEHCPPYFLYFEVDPQIIDVNIHPTKTEIKFEDERAVWKIVVAAVREALGKFNMVPS 334
Query: 359 FDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKN 392
+D + AE+ + S + + + +H +P N
Sbjct: 335 --IDFYDAAEVQIPSVQKEGPVTEPTVHINPEYN 366
>gi|403264965|ref|XP_003924730.1| PREDICTED: DNA mismatch repair protein Mlh3 [Saimiri boliviensis
boliviensis]
Length = 1461
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 18/353 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV+ +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQNGKALKACEADVTRPSAGTTVIVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREISFKYKEFELC 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC-----SDSWKANNGF 294
GYISS ++ K Q++++N R + + +HKL++ L S C S S + N+
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLILRTKLHKLIDFLLRKESIICKPKNGSSSRQMNSS- 293
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 294 -PRPRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 132/294 (44%), Gaps = 49/294 (16%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1166 VDVSSGQAESLAVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1225
Query: 1185 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1235
L V +DQHAA ER+RLE+L + G G+ + L E+ + E +LL+
Sbjct: 1226 LLVLVDQHAAHERVRLEQLINDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLRC 1285
Query: 1236 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1284
+ + ++D G + + S S + N L+R + +T V +
Sbjct: 1286 YHKNLEDLG-LEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSMVEELIR--- 1341
Query: 1285 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1344
+ +E LQ G P +V +VL S+AC GA+ F D L E ++E L
Sbjct: 1342 ---EQVELLQTTGGIQG--LLPLTVQKVLASQACHGAVKFNDGLSLEESCRLIEALSLCQ 1396
Query: 1345 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1392
L FQCAHGRP+ +PL +++ L ++ +A+L ++ W + E +++
Sbjct: 1397 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLAKLRKMAQAWRLFGKAECDTRQS 1450
>gi|449549459|gb|EMD40424.1| hypothetical protein CERSUDRAFT_130259 [Ceriporiopsis subvermispora
B]
Length = 887
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 214/441 (48%), Gaps = 48/441 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGV--CNCYVKVVDDGS 61
I +LP+ R+ +RS +L L ++V ELV NS+DAGA V + V +C+V+ DDG+
Sbjct: 13 IEQLPQTTRSKLRSTQILTSLPQIVSELVQNSLDAGAHNVDIGVNCEEWSCWVR--DDGA 70
Query: 62 GISRDGLVLL-----GERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 116
GISRDGL +L G R+ TSK A + + T TFGFRGEALAS +D+ LEI ++
Sbjct: 71 GISRDGLAVLEGGPGGGRYGTSKAYTPASLGEVT---TFGFRGEALASAADLCCLEISSR 127
Query: 117 AHGRPNGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
+ ++K K LY G I R+ GT V RD FYN PVRR + +P + +
Sbjct: 128 TARSRECWSVILKDGKSLYNGPSIRWRRESPGTVVCVRDAFYNLPVRR-FSHPTPARTIE 186
Query: 175 SVKKCVLRIALVHPKVSF------KFIDMES-EDELLCTCSSSSPLALLISSFGIEDFSF 227
++K + +ALV P+V+F K D E+ + +L ++S L+ + +G
Sbjct: 187 LIRKGIETLALVFPEVAFTLENTSKAGDGEARKGRVLAIPRTTSTLSSFRNLYGRALAEH 246
Query: 228 LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
+ E + + + + G+IS + KA+Q++Y+N + +H+L++ ++ S
Sbjct: 247 MQEFDESWNDMRLQGFIS--LEGALSKAYQFLYVNRHLMATSDLHRLIDQRFSNSTFSKH 304
Query: 288 WKANNGFL------KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF 341
G + + K++ P Y+LNL D +P K+ V +D AF
Sbjct: 305 SYDEAGEMSSRSESRRSPRKTEKKPVYVLNLLINPQQLDNCLEPAKSEVQLRDPGAASAF 364
Query: 342 IERAIRSAWMKKIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMF 401
+ I D+F + LP E+ + +++ L SP K D
Sbjct: 365 LSLVI----------DAFLIQ--HGFALPREAGK----RAACSLSDSPQKRRRLYDDGQG 408
Query: 402 HKECER--ITFQEFQKDPVEL 420
H+ R +T +QKD EL
Sbjct: 409 HRSINRPSVTASSYQKDAAEL 429
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 1306 PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
P +L ++NSKACRGAIMF D+L +C +V+ L +T+ FQCAHGRP+ VPL +L+
Sbjct: 802 PRELLELINSKACRGAIMFNDTLTLEQCIRLVKRLAETAFPFQCAHGRPSLVPLAHLD 859
>gi|402876737|ref|XP_003902112.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3
[Papio anubis]
Length = 1456
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 183/355 (51%), Gaps = 22/355 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRPSGGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKQFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGKR 299
GYISS ++ K Q++++N R V + +HKL++ L S C K NG +
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIIC----KPKNGSTSRQM 290
Query: 300 SKS---QACP----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
S S ++ P Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 291 SSSLRHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 127/288 (44%), Gaps = 49/288 (17%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1161 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDSKFIACLMSTKTEENGEAGGN 1220
Query: 1185 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1235
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1221 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1280
Query: 1236 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1284
+ + ++D G + S S + N L+R + +T V
Sbjct: 1281 YHKNLEDLGLEL-VFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR--- 1336
Query: 1285 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1344
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1337 ---EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIETLSSCQ 1391
Query: 1345 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1386
L FQCAHGRP+ +PL +++ L ++ +A+L ++ W + E
Sbjct: 1392 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLAKLRKMAQAWRLFGKAE 1439
>gi|402226291|gb|EJU06351.1| hypothetical protein DACRYDRAFT_113068 [Dacryopinax sp. DJM-731
SS1]
Length = 867
Score = 153 bits (386), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 190/367 (51%), Gaps = 31/367 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVDDGS 61
I LPE R+ +RS +L +L ++V ELV NS+DAGA +V V + C+V+ DDG
Sbjct: 8 ITLLPEETRSILRSTQILTNLPQLVSELVQNSLDAGARQVDVGIHPEAWACWVR--DDGC 65
Query: 62 GISRDGLVLLGE-----RHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 116
GI R+GL LL ++ATSK H + + + TFGFRGEALAS D++++EI +
Sbjct: 66 GIPREGLDLLARGREKGKYATSK-NHGTSVLEVSS--TFGFRGEALASAIDIAIVEISAR 122
Query: 117 AHGRPNGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
+ + + ++KG +Y G + + GT V +D FYN PVRR +P L
Sbjct: 123 SADK-GSWCIIVKGGNKIYAGPPLRWRTERPGTIVNIKDAFYNLPVRR-MSHPTPSATLQ 180
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDE-------LLCTCSSSSPLALLISSFGIEDFSF 227
+V++ + ++AL+ P V F +E E LL +SS L FG
Sbjct: 181 TVRRDIEKLALMFPHVCFTLEKSTTEREAGEGQKRLLTILKTSSVLDTFSHLFGKTLTQN 240
Query: 228 LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
++ + G + I G++S + K++Q++Y+N V +H +++ ++
Sbjct: 241 VEIIKERSGNITIEGFLS--LEGTPSKSYQFLYVNRHPVTPCELHTVIDRKFSATRFGRK 298
Query: 288 WKANNG----FLKGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF 341
NG KRS K++ P Y+LN+ P +L D++ +P K +V F+D + V++F
Sbjct: 299 ALDENGESVTQTSSKRSPRKTERRPVYVLNVSVPPTLLDISLEPAKGNVFFEDADTVISF 358
Query: 342 IERAIRS 348
+ + I S
Sbjct: 359 LGQTIES 365
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 127/261 (48%), Gaps = 54/261 (20%)
Query: 1158 INKSCLEDAKVLQQVDKKFI----PVVAGG------TLAVIDQHAADERIRLEE------ 1201
+++S L A V+ QVD+KF+ P++ L +IDQHAADERIR+E
Sbjct: 593 LSRSSLSQAVVINQVDRKFVACKVPLLTAAEQGIQSMLLMIDQHAADERIRVEHFLRNFC 652
Query: 1202 ---LRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQN---FAEQIKDWGWICNIHTQGSR 1255
L HK G V LD + + + + + LQ E + WG+ ++ ++ S
Sbjct: 653 VRFLHHK--DGCSVVVRELDPPKSIPITKQDAEFLQQESCVMEIFERWGFRLSL-SELSM 709
Query: 1256 SFNKNLNLLQRQITVITL---LAVPCIFGVNLSDV--DLLEFLQQ-------LADTDGSS 1303
+ ++ + I V ++ +AV + G L ++ D L LQ + ++G+
Sbjct: 710 FAHGREDIAEAHILVSSIPDAVAVKLLLGDQLKELVTDFLAKLQHEGVESVPIIQSEGTC 769
Query: 1304 TT-----------------PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1346
P ++ ++NS++CRGAIMF DSL ++C +V +L +T L
Sbjct: 770 INDVEARHKAGWMKALRWCPEGLIDLINSRSCRGAIMFNDSLSLTQCEQLVRQLSETVLP 829
Query: 1347 FQCAHGRPTTVPLVNLEALHK 1367
FQCAHGRP+ VPL ++ A K
Sbjct: 830 FQCAHGRPSMVPLTHMGAAFK 850
>gi|376261286|ref|YP_005148006.1| DNA mismatch repair protein MutL [Clostridium sp. BNL1100]
gi|373945280|gb|AEY66201.1| DNA mismatch repair protein MutL [Clostridium sp. BNL1100]
Length = 665
Score = 153 bits (386), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 175/337 (51%), Gaps = 30/337 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
MG I L E N + +G V+ VV+ELV NS+DAGAT + V + G+ Y+K+
Sbjct: 1 MGRIIVLDENTSNKIAAGEVVEKPASVVKELVENSIDAGATSISVDIKNGGIS--YIKIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+GSG+ D + + ERHATSK+ D+D + T GFRGEALASI+ V+ +E++TK
Sbjct: 59 DNGSGMDEDDVEIAFERHATSKIKRAEDLD---SVITMGFRGEALASIASVASVELMTKT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G +KG ++ + VGTT + +DLF+N P R K+++ + + +
Sbjct: 116 AASTYGMYVHIKGG--VFQDVRQTGCPVGTTFIIKDLFFNTPARYKFLKKDSTEAGY-IS 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ RIAL +P +SFK + ++ L+ T ++ +++ S +G E L V D
Sbjct: 173 DTISRIALGNPDISFKLTNGKT--TLIHTPGNNDLKSVIYSIYGKEIIKDLVAVEYADEK 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
++ISGY+ P + S + +Q +YIN RYV KL+++ +A + L
Sbjct: 231 IKISGYVGKPEAARSNRNYQSLYINKRYVK----SKLVSY--------SVEQAFSSILMK 278
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD 334
R P ++LN+ L D P KT V F D
Sbjct: 279 NR-----FPFFVLNIDINPVLVDANVHPAKTEVRFAD 310
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 22/211 (10%)
Query: 1163 LEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQE 1222
L D K + Q +I + + L ++DQHAA ERI E+LR K S E + +
Sbjct: 474 LADMKYIGQAFSTYILLQSNDELVMVDQHAAHERIIYEKLRTKYDSQENTT--------Q 525
Query: 1223 LVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV 1282
L+L + QL + IK + N F N I + +P + G
Sbjct: 526 LLLEPVVIQLQPFELDAIKTKHELLNGIGFVFEDFGNN---------SIIIRGIPYMVG- 575
Query: 1283 NLSDVDL-LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELK 1341
+ S D+ +E Q+L ++ +TP + ++++ AC+ AI L E ++ EL
Sbjct: 576 DCSPRDIFIELTQKLQESIKPVSTPLAD-EIIHTIACKAAIKANKKLDEKEVHQLLTELS 634
Query: 1342 QTSLCFQCAHGRPTTVPLVN--LEALHKQIA 1370
T + C HGRPT + L +E + K+I
Sbjct: 635 NTGRRYTCPHGRPTVIRLTKYEIEKMFKRIV 665
>gi|312866835|ref|ZP_07727048.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus parasanguinis F0405]
gi|311097618|gb|EFQ55849.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus parasanguinis F0405]
Length = 647
Score = 153 bits (386), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 174/353 (49%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 1 MSQIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIIVEIEEAGLKSIRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI++D + L RHATSK+ AD+ I T GFRGEA+ SI+ VS+L ++T G
Sbjct: 61 GEGIAQDEVALALRRHATSKIKSQADL---FRIRTLGFRGEAMPSIASVSILTLLTAQEG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V KG + ++ VGT + DLF+N P R KY++S ++ H V
Sbjct: 118 AAHGTKLVAKGGEI--EEVEPATSPVGTKITVEDLFFNTPARLKYLKSQQAELSHIV-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D E
Sbjct: 175 LNRLSLAHPEIAFTLIN--DGKEMTKTAGTGNLRQAIAGVYGLASAKKMVAIENRDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 VTGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SK P ++N++ L D+ P K V ++A I +AI +A
Sbjct: 274 SKLMVGRFPLAIINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIANAL 326
>gi|404448306|ref|ZP_11013299.1| DNA mismatch repair protein MutL [Indibacter alkaliphilus LW1]
gi|403765927|gb|EJZ26802.1| DNA mismatch repair protein MutL [Indibacter alkaliphilus LW1]
Length = 627
Score = 152 bits (385), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 177/369 (47%), Gaps = 41/369 (11%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
I+ LP+A+ N + +G V+ ++EL+ N++DAGA+KV V V ++V+DDG
Sbjct: 4 VIHLLPDAIANQIAAGEVVQRPASALKELLENAIDAGASKVQVLVKDAGKALIQVIDDGK 63
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+S + ERHATSK+ + DD I TFGFRGEALASI+ V+ +E+ T+ G
Sbjct: 64 GMSMTDARMSFERHATSKI---KNSDDLFSIRTFGFRGEALASIAAVAQVEMKTRQKGEE 120
Query: 122 NGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++GS+ ++++ GT + ++LF+N P RR +++S+P ++ H V
Sbjct: 121 LGTIIQVEGSEV-------KKQEPAACPEGTCISMKNLFFNVPARRNFLKSNPVEMRHLV 173
Query: 177 KKCVLRIALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ R+AL +P++ F I DME L S ++ FG L +
Sbjct: 174 DE-FQRVALSYPEIGFTMIQNDME-----LFNLSPGKLSQRIVGIFGKSYQGQLVACQED 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
L I GYI P ++ + QY ++N+RY+ +H + H +D
Sbjct: 228 SPHLNIKGYIGKPENAKKTRGEQYFFVNNRYIKSNYLHHAVTHAYEGLMSAD-------- 279
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
P Y+L L + D+ P KT + F D V A I A++ A +
Sbjct: 280 ---------MNPFYVLFLEIDPTHIDINVHPTKTEIKFDDERTVYAVIRSAVKQALGAHL 330
Query: 355 AHDSFDVDM 363
+ D M
Sbjct: 331 VVPTLDFSM 339
>gi|355693448|gb|EHH28051.1| hypothetical protein EGK_18388 [Macaca mulatta]
Length = 1541
Score = 152 bits (385), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 183/355 (51%), Gaps = 22/355 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 96 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 155
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 156 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 212
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 213 TFVKLFQSGKALKACEADVTRPSGGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 270
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 271 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKQFELS 330
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGKR 299
GYISS ++ K Q++++N R V + +HKL++ L S C K NG +
Sbjct: 331 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIIC----KPKNGSTSRQM 384
Query: 300 SKS---QACP----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
S S ++ P Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 385 SSSLRHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 439
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 127/288 (44%), Gaps = 49/288 (17%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1222 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDSKFIACLMSTKTEENGEAGGN 1281
Query: 1185 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1235
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1282 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1341
Query: 1236 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1284
+ + ++D G + S S + N L+R + +T V
Sbjct: 1342 YHKNLEDLGLEL-VFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR--- 1397
Query: 1285 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1344
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1398 ---EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIETLSSCQ 1452
Query: 1345 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1386
L FQCAHGRP+ +PL +++ L ++ +A+L ++ W + E
Sbjct: 1453 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLAKLRKMAQAWRLFGKAE 1500
>gi|383873221|ref|NP_001244712.1| DNA mismatch repair protein Mlh3 [Macaca mulatta]
gi|380811732|gb|AFE77741.1| DNA mismatch repair protein Mlh3 isoform 1 [Macaca mulatta]
Length = 1456
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 183/355 (51%), Gaps = 22/355 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRPSGGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKQFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGKR 299
GYISS ++ K Q++++N R V + +HKL++ L S C K NG +
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIIC----KPKNGSTSRQM 290
Query: 300 SKS---QACP----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
S S ++ P Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 291 SSSLRHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 127/288 (44%), Gaps = 49/288 (17%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1161 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDSKFIACLMSTKTEENGEAGGN 1220
Query: 1185 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1235
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1221 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1280
Query: 1236 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1284
+ + ++D G + S S + N L+R + +T V
Sbjct: 1281 YHKNLEDLGLEL-VFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR--- 1336
Query: 1285 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1344
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1337 ---EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIETLSSCQ 1391
Query: 1345 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1386
L FQCAHGRP+ +PL +++ L ++ +A+L ++ W + E
Sbjct: 1392 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLAKLRKMAQAWRLFGKAE 1439
>gi|127511498|ref|YP_001092695.1| DNA mismatch repair protein [Shewanella loihica PV-4]
gi|189030413|sp|A3QAD8.1|MUTL_SHELP RecName: Full=DNA mismatch repair protein MutL
gi|126636793|gb|ABO22436.1| DNA mismatch repair protein MutL [Shewanella loihica PV-4]
Length = 631
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 182/358 (50%), Gaps = 43/358 (12%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ V++ELV NS+DAGAT+V + + +K+ D+GS
Sbjct: 2 TIRILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIDKGGSKLIKITDNGS 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI ++ L L RHATSKL L D+D I +FGFRGEALASIS VS L + ++ +
Sbjct: 62 GIPKEELSLALSRHATSKLASLDDLD---AILSFGFRGEALASISSVSRLTLTSRTQEQS 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ +GS+ + + + VG+TV + DLF+N P RR++++S + H + + +
Sbjct: 119 EAWQAYAEGSE-MAVRVIPAAHPVGSTVEAADLFFNTPARRRFLKSDKTEFTH-IDEWLK 176
Query: 182 RIALVHPKVSF----------KFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEV 231
RIALV ++ F + ++E + L + S A ++ V
Sbjct: 177 RIALVRSEIHFTLKHNGKQVRNYRPAKTEAQYLQRLAQVSGKAFADNAL---------RV 227
Query: 232 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 291
+ N L +SGYI SP+ ++V QY Y+N R V +L+NH +A
Sbjct: 228 DCNHNGLSLSGYIQSPFSEMAVGDTQYFYVNGRLVRD----RLVNHAVR--------QAF 275
Query: 292 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
L+G+ Q +LNL PH + D+ P K V F + V FI +A+ SA
Sbjct: 276 AQQLQGE----QVAFVLMLNLD-PHQV-DVNVHPAKHEVRFHESRYVHDFILQALESA 327
>gi|291519453|emb|CBK74674.1| DNA mismatch repair protein MutL [Butyrivibrio fibrisolvens 16/4]
Length = 632
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 186/354 (52%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
MG IN L + + + +G V+ V +EL+ NS+DAGAT + V + G Y+++ D+
Sbjct: 1 MGKINLLSQETIDKIAAGEVVERPASVAKELIENSIDAGATAISVEIKGGGIEYLRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI +D + + RH+TSK+ D+D+ + + GFRGEAL+SIS VS +E+ITK
Sbjct: 61 GSGIDKDQIQIAFLRHSTSKISSAVDLDN---VRSLGFRGEALSSISAVSKVELITKTKD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G +++G+K + L D GTT + R LFYN P R+K+++S + + V
Sbjct: 118 SLLGASYIIEGAKEISL--TDVGAPDGTTFIVRQLFYNTPARKKFLKSESTEGSY-VFDV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V +AL HP++SFKF + + E L T + + + +G + S + ++ D +
Sbjct: 175 VEHLALSHPEISFKF--LVNGKEKLMTSGNGTLSDTIYQIYGRQIASNVLDIEYVDEKVS 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G+I + +AF++ ++NSRY+ N+L+ + C + + GFL G +
Sbjct: 233 ITGFIGQSVIARGNRAFEHFFVNSRYIKS-------NNLSRA--CEEGYY---GFLMGHQ 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +++N+ S D+ P K V F++ V + + I ++
Sbjct: 281 -----YPFFVINIAFTDSAVDVNVHPTKQEVRFENESEVCQLLTKTINQRLRRR 329
Score = 46.6 bits (109), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 24/203 (11%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1217
+NK +++ K++ QV + V + +IDQHAA E++ E+ ++ + + S +
Sbjct: 436 LNKEAVKEHKIIGQVFDTYWIVEYDKNMYIIDQHAAHEKVLFEKTMARLKNNQMTS-QMI 494
Query: 1218 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1277
+ L L +N+ E + G+ SF N LA+
Sbjct: 495 SPPVIVSLSPQDVLLFENYREAFEKLGYRV-------ESFGGNE------------LAIN 535
Query: 1278 CIFGVNLSDVDLLEF-LQQLADTDG--SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1334
I G NL ++D F L+ LAD +S + ++ + S +C+ A+ + L E
Sbjct: 536 GIPG-NLLNLDPKAFFLEVLADCQSYKASDSFDMIIERVASMSCKAAVKGNNRLSIPEIK 594
Query: 1335 LIVEELKQTSLCFQCAHGRPTTV 1357
++++L + + C HGRPT +
Sbjct: 595 TLIDDLLELENPYHCPHGRPTMI 617
>gi|387880489|ref|YP_006310792.1| DNA mismatch repair protein [Streptococcus parasanguinis FW213]
gi|386793937|gb|AFJ26972.1| DNA mismatch repair protein [Streptococcus parasanguinis FW213]
Length = 667
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 173/353 (49%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 21 MSQIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIIVEIEEAGLKSIRITDN 80
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ AD+ I T GFRGEA+ SI+ VS+L ++T G
Sbjct: 81 GEGIAHDEVALALRRHATSKIKSQADL---FRIRTLGFRGEAMPSIASVSILTLLTAQEG 137
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V KG + L + VGT + DLF+N P R KY++S ++ H V
Sbjct: 138 AAHGTKLVAKGGEIEEL--EPATNPVGTKITVEDLFFNTPARLKYLKSQQAELSHIV-DI 194
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D E
Sbjct: 195 LNRLSLAHPEIAFTLIN--DGKEMTKTAGTGNLRQAIAGVYGLASAKKMVAIENRDLDFE 252
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 253 VTGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 293
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SK P ++N++ L D+ P K V ++A I +AI +A
Sbjct: 294 SKLMVGRFPLAIINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIANAL 346
>gi|355778739|gb|EHH63775.1| hypothetical protein EGM_16809 [Macaca fascicularis]
Length = 1364
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 183/355 (51%), Gaps = 22/355 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 46 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 105
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 106 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 162
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 163 TFVKLFQSGKALKACEADVTRPSGGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 220
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 221 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKQFELS 280
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGKR 299
GYISS ++ K Q++++N R V + +HKL++ L S C K NG +
Sbjct: 281 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIIC----KPKNGSTSRQM 334
Query: 300 SKS---QACP----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
S S ++ P Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 335 SSSLRHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 389
Score = 48.1 bits (113), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 15/79 (18%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1172 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDSKFIACLMSTKTEENGEAGGN 1231
Query: 1185 LAV-IDQHAADERIRLEEL 1202
L V +DQHAA ERIRLE+L
Sbjct: 1232 LLVLVDQHAAHERIRLEQL 1250
>gi|405120339|gb|AFR95110.1| Mlh3p [Cryptococcus neoformans var. grubii H99]
Length = 813
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 196/370 (52%), Gaps = 29/370 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC--NCYVKVVD 58
M I LP T+RS +L L ++ EL+ NS+DAGATK+ YV + N ++V D
Sbjct: 1 MPDILPLPHPTSTTLRSSIILPSLAQIFSELLQNSLDAGATKIECYVNMAKGNESLRVED 60
Query: 59 DGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 118
+G+GIS+DGL +G+R TSK H + +G++GFRGEALASI+ +SLL+I T+
Sbjct: 61 NGTGISKDGLAKIGKRFRTSKEIHEGGLGP---VGSYGFRGEALASIASLSLLDITTRRA 117
Query: 119 GRPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
P Y K++K SK L+ G + +R GTTVV R++F PVRR+ + ++ +L +
Sbjct: 118 SFPV-YTKILKHSKTLFEGPNPDRHISGGQGTTVVVREIFRTIPVRREELAATSSTLLMT 176
Query: 176 -VKKCVLRIALVHPKVSFKFIDMESE-----DELLCTCSSSSPLALLISSFGIEDFSFLD 229
+KK V +AL + V + + + ++ +S S L + + +G +
Sbjct: 177 QLKKVVETLALGNTGVRWVLWEERTTTTGGLKRIVGINASDSSLDVFKALYGSALVQSVQ 236
Query: 230 EVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWK 289
+ G +++G+IS D KA Q++Y+N+ + +G +H + AS ++
Sbjct: 237 RIRVTVGEKKVNGFISISGD--VSKAHQHLYVNNYPIDRGDVHTAIAKKFASSKFANLAS 294
Query: 290 AN------NGFLKGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEP---- 337
A + G+RS + + P Y+LN+ P D++++P K + +KD E
Sbjct: 295 AGQHDKDEDYHPSGRRSPRRLERYPIYVLNVTLPAGELDVSYEPQKGILGYKDIETLKTM 354
Query: 338 VLAFIERAIR 347
+LA ++ +R
Sbjct: 355 LLAVVDEFLR 364
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 117/245 (47%), Gaps = 40/245 (16%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGGT-----LAVIDQHAADERIRLEELRHKVLSGEGK 1212
I+KS L +A VL QVD+KFI VV T LA+IDQHAADER+ +E++ ++ G +
Sbjct: 533 ISKSSLSNATVLGQVDRKFIAVVLRTTINLTTLALIDQHAADERVAVEKVLLELCKGFAR 592
Query: 1213 S---VAYL-DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNK--------- 1259
VA L A ++L + Q+L Q W ++ S +
Sbjct: 593 DDLLVADLTKARPMIILTQAEAQILSQPGVQPLFMRWGVHLTMPPGLSHGEYVQVKVEAV 652
Query: 1260 NLNLLQR-------QITVITLLAVPCIFGVNLSDVDLLEFLQ--QLADTDGSST------ 1304
L+LL R ++T + +P + L+E L+ + D +G
Sbjct: 653 PLSLLNRLGRKEGLEMTRLVRGYLPIVADHAGEITALVENLEGKAMEDNEGGDIEGYGGD 712
Query: 1305 -------TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1357
P +L + NSKACRGAIMF D L +C ++++L +T F CAHGRP+ V
Sbjct: 713 WGRVMRFMPREMLELANSKACRGAIMFEDRLSHDQCDRLIQQLSRTRFPFMCAHGRPSMV 772
Query: 1358 PLVNL 1362
PLV L
Sbjct: 773 PLVIL 777
>gi|322390454|ref|ZP_08063974.1| DNA mismatch repair protein HexB [Streptococcus parasanguinis ATCC
903]
gi|321142853|gb|EFX38311.1| DNA mismatch repair protein HexB [Streptococcus parasanguinis ATCC
903]
Length = 686
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 173/353 (49%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 40 MSQIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIRITDN 99
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ AD+ I T GFRGEA+ SI+ VS+L ++T G
Sbjct: 100 GEGIAHDEVALALRRHATSKIKSQADL---FRIRTLGFRGEAMPSIASVSILTLLTAQEG 156
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V KG + ++ VGT + DLF+N P R KY++S ++ H V
Sbjct: 157 AAHGTKLVAKGGEI--EEVEPATSPVGTKITVEDLFFNTPARLKYLKSQQAELSHIV-DI 213
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D E
Sbjct: 214 LNRLSLAHPEIAFTLIN--DGKEMTKTAGTGNLRQAIAGVYGLASAKKMVAIENRDLDFE 271
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 272 VTGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 312
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SK P ++N++ L D+ P K V ++A I +AI +A
Sbjct: 313 SKLMVGRFPLAIINIKIDPYLADVNVHPTKQEVRISKERELMALISQAIANAL 365
>gi|326202165|ref|ZP_08192035.1| DNA mismatch repair protein MutL [Clostridium papyrosolvens DSM
2782]
gi|325987960|gb|EGD48786.1| DNA mismatch repair protein MutL [Clostridium papyrosolvens DSM
2782]
Length = 664
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 179/353 (50%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
MG I L E N + +G V+ VV+ELV NS+DAGAT + V + G+ Y+K+
Sbjct: 1 MGRIIVLDENTSNKIAAGEVVEKPASVVKELVENSIDAGATSISVDIKNGGIS--YIKIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+GSG+ D + + ERHATSK+ D+D + T GFRGEALASI+ V+ +E++TK
Sbjct: 59 DNGSGMDEDDVEIAFERHATSKIKRAEDLD---SVITMGFRGEALASIASVASVELMTKT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G ++G ++ + VGTT + +DLF+N P R K+++ + + +
Sbjct: 116 AASTYGMYVHIRGG--VFQDVRQTGCPVGTTFIIKDLFFNTPARYKFLKKDSTEAGY-IS 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ RIAL +P +SFK + ++ L+ T ++ +++ S +G E L V D
Sbjct: 173 DTISRIALGNPDISFKLTNGKT--TLIHTPGNNDLKSVIYSIYGKELIKDLVAVEYADEK 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
++ISGY+ P + S + +Q +YIN RYV + S+ ++ + L
Sbjct: 231 IKISGYVGKPEAARSNRNYQSLYINKRYVKSKMV---------SYSVEQAFTS---ILMK 278
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
R P ++LN+ L D P KT V F D + I A+ +A
Sbjct: 279 NR-----FPFFVLNIDINPVLVDANVHPAKTEVRFADESNLSRTIYMAVSNAL 326
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 1163 LEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQE 1222
L D K + Q +I + + L ++DQHAA ERI E+LR K S E + +
Sbjct: 473 LADMKYIGQAFSTYILLQSNDELVMVDQHAAHERIIYEKLRVKFDSQENTT--------Q 524
Query: 1223 LVLPEIGYQL-------LQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
L+L + QL +++ E +K G++ F N I +
Sbjct: 525 LLLEPVVIQLQPFELDAVKSKHELLKGIGFVF-------EDFGNN---------SIIIRG 568
Query: 1276 VPCIFGVNLSDVDL-LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1334
+P + G + S D+ +E Q+L ++ +TP + ++++ AC+ AI L E
Sbjct: 569 IPYMVG-DCSPRDIFIELTQKLQESIRPVSTPLAD-EIIHTIACKAAIKANKKLDEKEVH 626
Query: 1335 LIVEELKQTSLCFQCAHGRPTTVPLVN--LEALHKQIA 1370
++ EL +T + C HGRPT + L +E + K+I
Sbjct: 627 QLLIELSKTGRRYTCPHGRPTVIRLTKYEIEKMFKRIV 664
>gi|160892635|ref|ZP_02073425.1| hypothetical protein CLOL250_00165 [Clostridium sp. L2-50]
gi|156865676|gb|EDO59107.1| DNA mismatch repair domain protein [Clostridium sp. L2-50]
Length = 681
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 178/351 (50%), Gaps = 26/351 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I L + + + +G V+ V++ELV NS+DAGAT + + + ++++ D+G G
Sbjct: 2 IKLLDQYTIDKIAAGEVIERPGSVIKELVENSIDAGATAITIEIKEGGMSFIRITDNGCG 61
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
IS++ + + RHATSKL DD I + GFRGEAL+SI+ V+ +E+ITK
Sbjct: 62 ISKEEVPVAFLRHATSKL---QTADDLLKIASLGFRGEALSSIAAVAQVELITKQEDALT 118
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G R + G K + ++ +GTT+V R+LFYN P R+K+M+ +P + V R
Sbjct: 119 GTRYQIHGGK--EISNEEIGAPLGTTIVVRNLFYNTPARKKFMK-TPATEGSYIYDLVCR 175
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+A+ HP VSFKFI M D+L T + ++ +G + + L E+NA + ++I+G
Sbjct: 176 MAMSHPDVSFKFI-MNGTDKLF-TSGNGRLKEIIYHIYGRDITNNLLEINAANDQVKITG 233
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
Y++ P S ++F+ Y+N RY+ + K + +F +
Sbjct: 234 YLAKPSISRGNRSFEDYYVNQRYIKSNILTKAIEDAYRTFVMVHKF-------------- 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P ++N SL D+ P K + F + + F ++R A + K
Sbjct: 280 ---PFTVINFEIDPSLIDVNIHPAKRELKFINEPDMYDFTYISVRKALLFK 327
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 20/178 (11%)
Query: 1187 VIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWI 1246
++DQHAA E+++ EEL + YL + L + L+ E ++ G+
Sbjct: 514 IMDQHAAHEKVKFEELMAN-YKNKTAIPQYLMPPAIVSLSGTESEFLRENLEFFQNLGF- 571
Query: 1247 CNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLSDVDLLEFLQQLADTDGSSTT 1305
I G + + L AVP +FG++ ++ LEF+ +L++ +G T
Sbjct: 572 -QIEGFGGKEYK--------------LSAVPANLFGLDGREL-FLEFIGELSE-NGQKQT 614
Query: 1306 PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
+ + L++ AC+ AI S+ E ++++L + + C HGRPT + + E
Sbjct: 615 IDTFISKLSTMACKAAIKGNTSISFKEADTLIDQLMKLENPYTCPHGRPTLISMTETE 672
>gi|422883113|ref|ZP_16929562.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK49]
gi|332363705|gb|EGJ41485.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK49]
Length = 698
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 221/469 (47%), Gaps = 59/469 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 51 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 110
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 111 GEGIAHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 167
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 168 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 222
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 223 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 279
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 280 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 320
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 321 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ- 379
Query: 355 AHDSFDVDMLEDAELPLESSRF----QSHQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S +S Q+S L + L +Q D + +++
Sbjct: 380 -------DLIPDALENLAKSTVKRANKSEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQL 432
Query: 409 TFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+F+E +PV A + ++P S+S+ FAE P+ ++DH
Sbjct: 433 SFEE-SAEPVHEATDEK-----AEPPQSTSV---KFAERKPVSYDQLDH 472
>gi|319946047|ref|ZP_08020296.1| DNA mismatch repair protein HexB [Streptococcus australis ATCC
700641]
gi|417919246|ref|ZP_12562781.1| DNA mismatch repair protein [Streptococcus australis ATCC 700641]
gi|319747855|gb|EFW00100.1| DNA mismatch repair protein HexB [Streptococcus australis ATCC
700641]
gi|342833936|gb|EGU68215.1| DNA mismatch repair protein [Streptococcus australis ATCC 700641]
Length = 649
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 174/356 (48%), Gaps = 30/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 1 MSQIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + + L RHATSK+ AD+ I T GFRGEAL SI+ VS++ I+T G
Sbjct: 61 GQGIAHEEVELALRRHATSKIKSQADL---FRIRTLGFRGEALPSIASVSVMTILTAQEG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + KG + L + VGT + DLF+N P R KYM+S ++ H V
Sbjct: 118 ASHGTKLEAKGGEITSL--EPATSPVGTKITVEDLFFNTPARLKYMKSQQAELSHIV-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D E
Sbjct: 175 LNRLSLAHPEIAFTLIN--DGHEMTRTAGTGNLRQAIAGVYGLATAKKMVAIETGDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 VSGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
SK P ++N++ L D+ P K V ++A I +AI SA ++
Sbjct: 274 SKLMVGRFPIAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIVSALKEQ 329
>gi|134111188|ref|XP_775736.1| hypothetical protein CNBD4650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258400|gb|EAL21089.1| hypothetical protein CNBD4650 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 812
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 196/370 (52%), Gaps = 29/370 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC--NCYVKVVD 58
M I LP T+RS +L L ++ EL+ NS+DA ATK+ YV + N ++V D
Sbjct: 1 MPNILPLPRPTSTTLRSSIILPSLAQIFSELLQNSLDAEATKIECYVNLAKGNETLRVED 60
Query: 59 DGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 118
+G+GIS++GL +G+R TSK H + +G++GFRGEALASI+ +SLL+I T+
Sbjct: 61 NGTGISKNGLAKIGKRFRTSKEIHEGGLGP---VGSYGFRGEALASIASLSLLDITTRRA 117
Query: 119 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
P Y K+++ SK L+ G + +R GTTVV R++F PVRR+ + ++ +L S
Sbjct: 118 SFPV-YTKILRHSKTLFEGPNPDRHIAGGQGTTVVVREIFRTIPVRREELAATSSTLLMS 176
Query: 176 -VKKCVLRIALVHPKVSFKFIDMESE-----DELLCTCSSSSPLALLISSFGIEDFSFLD 229
+KK V +AL +P V + + ++ ++ +S S L + + +G +
Sbjct: 177 QLKKVVETLALGNPGVRWVLWEEKTTTTGGLKRIMSINASDSALDVFKTLYGGALVQSVQ 236
Query: 230 EVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWK 289
++ G ++ G+IS D KA Q++YIN+ + +G +H + AS ++
Sbjct: 237 KIKVTAGKRKVDGFISISGD--VSKAHQHLYINNYPIDRGDVHTAIAKKFASSKFANLAS 294
Query: 290 AN------NGFLKGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEP---- 337
A + G+RS + + P Y+LN+ D++++P K + +KD E
Sbjct: 295 AGQHDEDEDYHPSGRRSPRRLERYPVYVLNVTLSAGELDVSYEPQKGVLGYKDIESLKTM 354
Query: 338 VLAFIERAIR 347
+LA ++ +R
Sbjct: 355 LLAVVDEFLR 364
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 114/249 (45%), Gaps = 48/249 (19%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGG-----TLAVIDQHAADERIRLEELRHKVLSGEGK 1212
I+KS L +A VL QVD+KFI VV TLA+IDQHAADER+ +E++ ++ G K
Sbjct: 533 ISKSSLSNATVLGQVDRKFIAVVLSTNINLTTLALIDQHAADERVAVEKVLLELCEGFAK 592
Query: 1213 SVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVIT 1272
L AE P I +L QI W+ ++ + L + +
Sbjct: 593 D-DLLVAELAKTRPMI---ILTQAEAQILSQPWVLSLFKRWGIRLTMPPGLSHGEYIQVK 648
Query: 1273 LLAVPC-----------------------IFGVNLSDVDLL-EFLQ--QLADTDGSST-- 1304
+ VP I + S++ +L E L+ + D +G T
Sbjct: 649 VETVPLSLLSRLGRKEGSEMTRLVRGYLPIVAEHASEITVLVENLEGKAMEDNEGGDTEG 708
Query: 1305 -----------TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGR 1353
P +L + NSKACRGAIMF D L +C ++++L QT F CAHGR
Sbjct: 709 YGGDWGRLMRFMPREMLELANSKACRGAIMFEDRLSHDQCDRLIQQLSQTRFPFMCAHGR 768
Query: 1354 PTTVPLVNL 1362
P+ VPLV L
Sbjct: 769 PSMVPLVIL 777
>gi|89891567|ref|ZP_01203071.1| DNA mismatch repair protein mutL [Flavobacteria bacterium BBFL7]
gi|89516114|gb|EAS18777.1| DNA mismatch repair protein mutL [Flavobacteria bacterium BBFL7]
Length = 608
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 184/373 (49%), Gaps = 28/373 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGAT++ + + V+V+DDG G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATQISLIIKDAGKTLVQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + D+ D + T GFRGEALAS++ ++ + + TK
Sbjct: 65 MSMTDARMAFERHATSKITNANDLFD---LHTKGFRGEALASVAAIAHVSLKTKREEDDL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++GSK + + GT + R+LFYN P RRK+++S + L ++ R
Sbjct: 122 GTFLEIEGSKV--VNQEPVVTTKGTMISVRNLFYNVPARRKFLKSDNVE-LRNITDEFHR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+A+ HP+V KF S D L S+ +++ G + L V ++ISG
Sbjct: 179 VAMAHPQVGLKF---SSNDTELFNLPISNYRQRIVNIMGAKTNEKLVPVEEETELVKISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + K QY ++N R++ H L+H S A G LK K +
Sbjct: 236 FVGKPEFARKTKGLQYFFVNDRFIK----HNYLHHAVTS--------AFEGLLKEKNN-- 281
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y L L P D+ P KT V F D + A + +++ A + + + ++ D D
Sbjct: 282 ---PTYFLFLDVPKDSVDINIHPTKTEVKFDDEHSLYAIVRASVKHA-LGQFSINAIDFD 337
Query: 363 MLEDAELPLESSR 375
E+P E ++
Sbjct: 338 KEPQYEVPYEYTK 350
>gi|309799336|ref|ZP_07693579.1| DNA mismatch repair protein MutL [Streptococcus infantis SK1302]
gi|308117003|gb|EFO54436.1| DNA mismatch repair protein MutL [Streptococcus infantis SK1302]
Length = 464
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 207/462 (44%), Gaps = 44/462 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GYGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEVEE--IIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMVEIENADLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P +++++ L D+ P K V ++A + AI K +
Sbjct: 274 SKLMVGRFPLAVIHIQIDPYLADVNVHPTKQEVRISKERELMALVSEAI----AKSLKEQ 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+ D LE+ +R + Q++ L + L + E R E
Sbjct: 330 TLIPDALENLAKSAVRNREKVEQTTLPLRENTL--------YYEKTELTRPPQAEVADHQ 381
Query: 418 VELAEENTEMEFFSQPKHSSSLLDGS--FAECLPIVPPKIDH 457
V L EE ++ F++ + FAE PI ++DH
Sbjct: 382 VNLTEERQDLNLFAKEALDQLIKPAKLHFAERKPISYDQLDH 423
>gi|422850576|ref|ZP_16897246.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK150]
gi|325695324|gb|EGD37224.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK150]
Length = 698
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 133/469 (28%), Positives = 222/469 (47%), Gaps = 59/469 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 51 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 110
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 111 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 167
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 168 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 222
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 223 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 279
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 280 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 320
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 321 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAISTSLKEQ- 379
Query: 355 AHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S + Q+S L + L +Q D + +++
Sbjct: 380 -------DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQL 432
Query: 409 TFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+F+E DPV + NT+ + ++P S+S+ FAE P+ ++DH
Sbjct: 433 SFEE-TADPV---QANTDEK--AEPPQSTSV---KFAERRPVSYDQLDH 472
>gi|301757817|ref|XP_002914774.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Ailuropoda
melanoleuca]
Length = 889
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 183/361 (50%), Gaps = 23/361 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQARLRSGLAICSLGQCVEELALNSLDAEAKCVAVRVNMETFQVQVIDNGLGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDIDKVGNRYFTSKCNSIQDLENPR---FYGFRGEALASIADMASAVEISSKKNRTGK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQFPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L ++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLAKSQKLRDIKFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK- 298
GYISS ++ K Q++++N R + + +HK ++ L S C K NG +
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLILRTKLHKFIDFLLRKESIIC----KPKNGSAARQM 290
Query: 299 ------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
RS + Y++N++C YD+ +P KT + F++W+ VL I+ ++ ++K
Sbjct: 291 NSSPRHRSNPELHGIYVVNMQCRFCEYDVCMEPAKTLIEFQNWDTVLVCIQEGVK-MFLK 349
Query: 353 K 353
K
Sbjct: 350 K 350
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 47/287 (16%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L+ P K + +VLQQVD KFI + AGG
Sbjct: 593 VDVSSGQAKSLVVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 652
Query: 1185 LAV-IDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
L V +DQHAA ER+RLE+L R K+LS + + E+ + E
Sbjct: 653 LLVLVDQHAAHERVRLEQLITDSYEKQQPQGSGRKKLLS------SIVSPPLEIRVTEEQ 706
Query: 1230 YQLLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSD 1286
+LL+ + + ++D G I T S + L ++R+ + P +
Sbjct: 707 RRLLRCYHKNLEDLGLEIIFPDTSDSLVLVGKVPLCFVEREANELRRGRSPVTKSIVEEF 766
Query: 1287 V-DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
+ + +E LQ G T P +V +VL S+AC GAI F D L P E ++E L L
Sbjct: 767 IREQVELLQTTGAIQG--TLPLTVQKVLASQACHGAIKFNDGLSPEESCRLIEALSWCQL 824
Query: 1346 CFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGE 1386
FQCAHGRP+ +PL +++ L ++ +A+L ++ WH + E
Sbjct: 825 PFQCAHGRPSMLPLADIDHLEEEKQIKPNLAKLRKMAQAWHLFGKAE 871
>gi|417936962|ref|ZP_12580268.1| DNA mismatch repair protein [Streptococcus infantis X]
gi|343399404|gb|EGV11926.1| DNA mismatch repair protein [Streptococcus infantis X]
Length = 649
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 199/435 (45%), Gaps = 42/435 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMVEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P +++++ L D+ P K V ++A + AI K +
Sbjct: 274 SKLMVGRFPLAVIHIQIDPYLADVNVHPTKQEVRISKERELMALVSEAI----AKSLKEQ 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+ D LE+ +R + Q++ L + L + E R T E
Sbjct: 330 TLIPDALENLAKSAVRNREKVEQTTLPLRENTL--------YYEKNEPTRPTQAEVADHQ 381
Query: 418 VELAEENTEMEFFSQ 432
V L EE ++ F++
Sbjct: 382 VNLTEEKQDLNLFAK 396
>gi|422847752|ref|ZP_16894435.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK72]
gi|325686750|gb|EGD28776.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK72]
Length = 698
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 133/469 (28%), Positives = 218/469 (46%), Gaps = 59/469 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 51 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 110
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 111 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 167
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 168 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 222
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E++ T S + + +G+ + E++A+D
Sbjct: 223 -DVINRLSLAHPEVAFTLIS--DGREMIRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 279
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 280 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 320
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 321 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ- 379
Query: 355 AHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S + Q+S L + L +Q D + +++
Sbjct: 380 -------DLIPDALENLAKSTVKRANKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQL 432
Query: 409 TFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+F+E K +E TE P S+S+ FAE P+ ++DH
Sbjct: 433 SFEESAKPFQANTDEKTE------PPQSTSV---KFAERRPVSYDQLDH 472
>gi|417794112|ref|ZP_12441375.1| DNA mismatch repair protein [Streptococcus oralis SK255]
gi|334271222|gb|EGL89616.1| DNA mismatch repair protein [Streptococcus oralis SK255]
Length = 649
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 209/462 (45%), Gaps = 44/462 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+EL+ N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELIENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++A + AI K +
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAI----AKSLKEQ 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+ D LE+ +R + Q++ L + L + E R T E
Sbjct: 330 TLIPDALENLAKSTVRNREKVEQTTLPLKENTL--------YYEQTEVTRPTQVEVSDHQ 381
Query: 418 VELAEENTEMEFFSQPK--HSSSLLDGSFAECLPIVPPKIDH 457
V+L EE ++ F++ + FAE P+ ++DH
Sbjct: 382 VDLTEERQDLTLFAKETLDQLTKPAKLHFAERKPVSYDQLDH 423
>gi|256003774|ref|ZP_05428762.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM
2360]
gi|385778794|ref|YP_005687959.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM
1313]
gi|419723189|ref|ZP_14250324.1| DNA mismatch repair protein mutL [Clostridium thermocellum AD2]
gi|419724907|ref|ZP_14251962.1| DNA mismatch repair protein mutL [Clostridium thermocellum YS]
gi|255992335|gb|EEU02429.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM
2360]
gi|316940474|gb|ADU74508.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM
1313]
gi|380771527|gb|EIC05392.1| DNA mismatch repair protein mutL [Clostridium thermocellum YS]
gi|380780956|gb|EIC10619.1| DNA mismatch repair protein mutL [Clostridium thermocellum AD2]
Length = 755
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 180/354 (50%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E N + +G V+ VV+ELV NS+DAG+T + V + ++KVVD+
Sbjct: 1 MGRIIILDENTANQIAAGEVVERPASVVKELVENSIDAGSTNISVEINNGGISFIKVVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI D + + ERHATSK+ +D++ I + GFRGEALASI+ VS +E+ ++
Sbjct: 61 GSGIEEDDIEIAFERHATSKIRRASDLE---AITSLGFRGEALASIASVSTVEVTSRPAH 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
R G ++G L G GTT + RDLFYN P R K+++ + + V
Sbjct: 118 REYGRYVKIQGGTVLESG--QVGCPAGTTFIVRDLFYNTPARFKFLKKDSTEAGY-VSDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIAL +P +SF+ I+ +++ ++ T ++ L+ + S +G E E++ D ++
Sbjct: 175 VSRIALGNPDISFRLIN--NKNTVIHTPGNNDLLSTIYSLYGKETAKECMEISYEDETVK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+GY SP + + + +Q +Y+N RY+ I ++ ++ + + F+
Sbjct: 233 ITGYAGSPEIARANRNYQSIYLNKRYIKNKVISSAIDEAYKTYLMKNKF----AFI---- 284
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+L + L D+ P K V F + + + A+ +A + K
Sbjct: 285 ---------VLYIELNPLLVDVNVHPTKMEVRFSREQEIFRAVYHAVNNALLSK 329
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 26/218 (11%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1217
I ++ DA+++ QV +I + L +IDQHAA ERIR EEL+ K E + YL
Sbjct: 559 IERNVFLDARIIGQVFSTYILLQNEDDLIIIDQHAAHERIRFEELKEKYARNESLA-QYL 617
Query: 1218 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1277
+ L L+ E G+I SF N I L +VP
Sbjct: 618 LTPVVIELTNQEIVFLEEEKELFNKLGFIF-------ESFGNN---------SIILRSVP 661
Query: 1278 CI---FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1334
GV + +++++FL ++ ++ AC+ A+ L E
Sbjct: 662 IPDEGVGVKEAFLEVVDFLMSKGRKYDKIIEEDALYQI----ACKSAVKANKKLDEIEIK 717
Query: 1335 LIVEELKQTSLCFQCAHGRPTTVPLVN--LEALHKQIA 1370
I+++L + C HGRPT V + E + K+I
Sbjct: 718 AILDKLNMLQNPYTCPHGRPTVVKITKYEFEKMFKRIV 755
>gi|414156450|ref|ZP_11412752.1| DNA mismatch repair protein mutL [Streptococcus sp. F0442]
gi|410870097|gb|EKS18056.1| DNA mismatch repair protein mutL [Streptococcus sp. F0442]
Length = 647
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 174/353 (49%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 1 MSQIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEA+ SI+ VS+L ++T G
Sbjct: 61 GEGIAHDEVALALRRHATSKIKNQADL---FRIRTLGFRGEAMPSIASVSILTLLTAQEG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V KG + L + VGT + DLF+N P R KY++S ++ H V
Sbjct: 118 AAHGTKLVAKGGEIEEL--EPATSPVGTKITVEDLFFNTPARLKYLKSQQAELSHIV-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D E
Sbjct: 175 LNRLSLAHPEIAFTLIN--DGKEMTKTAGTGNLRQAIAGVYGLASAKKMVAIENRDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 VTGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SK P +++++ L D+ P K V ++A I +AI +A
Sbjct: 274 SKLMVGRFPLAIIHIQIDPYLADVNVHPTKQEVRISKERELMALISQAIANAL 326
>gi|419800657|ref|ZP_14325928.1| DNA mismatch repair protein [Streptococcus parasanguinis F0449]
gi|385694485|gb|EIG25086.1| DNA mismatch repair protein [Streptococcus parasanguinis F0449]
Length = 693
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 217/464 (46%), Gaps = 50/464 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 47 MSQIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIRITDN 106
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ AD+ I T GFRGEA+ SI+ VS+L ++T G
Sbjct: 107 GEGIAHDEVALALRRHATSKIKSQADL---FRIRTLGFRGEAMPSIASVSILTLLTAQEG 163
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V KG + L + VGT + DLF+N P R KY++S ++ H V
Sbjct: 164 AAHGTKLVAKGGEIEEL--EPATSPVGTKITVEDLFFNTPARLKYLKSQQAELSHIV-DI 220
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D E
Sbjct: 221 LNRLSLAHPEIAFTLIN--DGKEMTKTAGTGNLRQAIAGVYGLVSAKKMVAIENRDLDFE 278
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 279 VTGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 319
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++N++ L D+ P K V +++ I +AI +A ++
Sbjct: 320 SKLMVGRFPLAIINIQIDPYLADVNVHPTKQEVRISKERELMSLISQAIANALKEQ---- 375
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
D++ DA L S + + + PL K+ + +E + + DP
Sbjct: 376 ----DLIPDALENLAKSTIRRTEKPVQT-TLPL----KENRLYYDRESQDFKLRPEVADP 426
Query: 418 VE-LAEEN-TEMEFFSQP--KHSSSLLDGSFAECLPIVPPKIDH 457
LA+E TE P K +S++ FAE +V ++DH
Sbjct: 427 QRPLADETATEARIQENPVEKPTSAI---KFAERKAVVYDELDH 467
>gi|125973294|ref|YP_001037204.1| DNA mismatch repair protein MutL [Clostridium thermocellum ATCC
27405]
gi|125713519|gb|ABN52011.1| DNA mismatch repair protein MutL [Clostridium thermocellum ATCC
27405]
Length = 755
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 180/354 (50%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E N + +G V+ VV+ELV NS+DAG+T + V + ++KVVD+
Sbjct: 1 MGRIIILDENTANQIAAGEVVERPASVVKELVENSIDAGSTNISVEINNGGISFIKVVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI D + + ERHATSK+ +D++ I + GFRGEALASI+ VS +E+ ++
Sbjct: 61 GSGIEEDDIEIAFERHATSKIRRASDLE---AITSLGFRGEALASIASVSTVEVTSRPAH 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
R G ++G L G GTT + RDLFYN P R K+++ + + V
Sbjct: 118 REYGRYVKIQGGTVLESG--QVGCPAGTTFIVRDLFYNTPARFKFLKKDSTEAGY-VSDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIAL +P +SF+ I+ +++ ++ T ++ L+ + S +G E E++ D ++
Sbjct: 175 VSRIALGNPDISFRLIN--NKNTVIHTPGNNDLLSTIYSLYGKETAKECMEISYEDETVK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+GY SP + + + +Q +Y+N RY+ I ++ ++ + + F+
Sbjct: 233 ITGYAGSPEIARANRNYQSIYLNKRYIKNKVISSAIDEAYKTYLMKNKF----AFI---- 284
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+L + L D+ P K V F + + + A+ +A + K
Sbjct: 285 ---------VLYIELNPLLVDVNVHPTKMEVRFSREQEIFRAVYHAVNNALLSK 329
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 26/218 (11%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1217
I ++ DA+++ QV +I + L +IDQHAA ERIR EEL+ K E + YL
Sbjct: 559 IERNVFLDARIIGQVFSTYILLQNEDDLIIIDQHAAHERIRFEELKEKYARNESLA-QYL 617
Query: 1218 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1277
+ L L+ E G+I SF N I L +VP
Sbjct: 618 LTPVVIELTNQEIVFLEEEKELFNKLGFIF-------ESFGNN---------SIILRSVP 661
Query: 1278 CI---FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1334
GV + +++++FL ++ ++ AC+ A+ L E
Sbjct: 662 IPDEGVGVKEAFLEVVDFLMSKGRKYDKIIEEDALYQI----ACKSAVKANKKLDEIEIK 717
Query: 1335 LIVEELKQTSLCFQCAHGRPTTVPLVN--LEALHKQIA 1370
I+++L + C HGRPT V + E + K+I
Sbjct: 718 AILDKLNMLQNPYTCPHGRPTVVKITKYEFEKMFKRIV 755
>gi|417918093|ref|ZP_12561646.1| DNA mismatch repair protein [Streptococcus parasanguinis SK236]
gi|342829084|gb|EGU63445.1| DNA mismatch repair protein [Streptococcus parasanguinis SK236]
Length = 692
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 174/353 (49%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 46 MSQIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIRITDN 105
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEA+ SI+ VS+L ++T G
Sbjct: 106 GEGIAHDEVALALRRHATSKIKNQADL---FRIRTLGFRGEAMPSIASVSILTLLTAQEG 162
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V KG + L + VGT V DLF+N P R KY++S ++ H V
Sbjct: 163 AAHGTKLVAKGGEIEEL--EPATSPVGTKVTVEDLFFNTPARLKYLKSQQAELSHIV-DI 219
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D E
Sbjct: 220 LNRLSLAHPEIAFTLIN--DGKEMTKTAGTGNLRQAIAGVYGLASAKKMVAIENRDLDFE 277
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 278 VTGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 318
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SK P +++++ L D+ P K V ++A I +AI +A
Sbjct: 319 SKLMVGRFPLAIIHIQIDPYLADVNVHPTKQEVRISKERELMALISQAIANAL 371
>gi|281417498|ref|ZP_06248518.1| DNA mismatch repair protein MutL [Clostridium thermocellum JW20]
gi|281408900|gb|EFB39158.1| DNA mismatch repair protein MutL [Clostridium thermocellum JW20]
Length = 761
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 180/354 (50%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E N + +G V+ VV+ELV NS+DAG+T + V + ++KVVD+
Sbjct: 1 MGRIIILDENTANQIAAGEVVERPASVVKELVENSIDAGSTNISVEINNGGISFIKVVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI D + + ERHATSK+ +D++ I + GFRGEALASI+ VS +E+ ++
Sbjct: 61 GSGIEEDDIEIAFERHATSKIRRASDLE---AITSLGFRGEALASIASVSTVEVTSRPAH 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
R G ++G L G GTT + RDLFYN P R K+++ + + V
Sbjct: 118 REYGRYVKIQGGTVLESG--QVGCPAGTTFIVRDLFYNTPARFKFLKKDSTEAGY-VSDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIAL +P +SF+ I+ +++ ++ T ++ L+ + S +G E E++ D ++
Sbjct: 175 VSRIALGNPDISFRLIN--NKNTVIHTPGNNDLLSTIYSLYGKETAKECMEISYEDETVK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+GY SP + + + +Q +Y+N RY+ I ++ ++ + + F+
Sbjct: 233 ITGYAGSPEIARANRNYQSIYLNKRYIKNKVISSAIDEAYKTYLMKNKF----AFI---- 284
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+L + L D+ P K V F + + + A+ +A + K
Sbjct: 285 ---------VLYIELNPLLVDVNVHPTKMEVRFSREQEIFRAVYHAVNNALLSK 329
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1217
I ++ DA+++ QV +I + L +IDQHAA ERIR EEL+ K E + YL
Sbjct: 565 IERNVFLDARIIGQVFSTYILLQNEDDLIIIDQHAAHERIRFEELKEKYARNESLA-QYL 623
Query: 1218 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1277
+ L L+ E G+I SF N I L +VP
Sbjct: 624 LTPVVIELTNQEIVFLEEEKELFNKLGFIF-------ESFGNN---------SIILRSVP 667
Query: 1278 CI---FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1334
GV + +++++FL ++ ++ AC+ A+ L E
Sbjct: 668 IPDEGVGVKEAFLEVVDFLMSKGRKYDKIIEEDALYQI----ACKSAVKANKKLDEIEIK 723
Query: 1335 LIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
I+++L + C HGRPT V + E
Sbjct: 724 AILDKLNMLQNPYTCPHGRPTVVKITKYE 752
>gi|410584484|ref|ZP_11321587.1| DNA mismatch repair protein MutL [Thermaerobacter subterraneus DSM
13965]
gi|410504419|gb|EKP93930.1| DNA mismatch repair protein MutL [Thermaerobacter subterraneus DSM
13965]
Length = 712
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 168/354 (47%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I RL V N + +G V+ VV+ELV NS+DAGA ++ V V + V DD
Sbjct: 1 MGRIRRLDPQVINQIAAGEVVERPASVVKELVENSLDAGARRIRVDVAEGGLRSITVSDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ D +L ERHATSK+ L D+ A GT GFRGEALA+++ V+ LE++T+
Sbjct: 61 GCGMDPDDALLAVERHATSKISRLDDLARA---GTLGFRGEALAAMASVARLELVTRPPA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G+R V++G G GT V RDLF+N P RRK+++ P +
Sbjct: 118 AEGGFRVVVEGGAQRSAG--PWASPPGTRVTVRDLFFNTPARRKHLK-GPVAEFGRIADV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V AL P V F+ + E+L T S P ++ FG + + L V A A
Sbjct: 175 VTAHALARPDVRFEL--WHNGREVLRTSGSGDPAVAVLECFGPDVATGLIPVAAAGDACR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY+ +P + + +A+Q+ IN R V + F ++++ L +R
Sbjct: 233 IEGYVGAPRIARASRAWQFFSINRRPV---------QVPSLRFSLENAYRH---LLPARR 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +L L P D+ P K V V + + RA+ SA ++
Sbjct: 281 -----YPVAVLALTVPGEEVDVNVHPAKLEVRLVRERAVASLLYRAVESALAER 329
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 72/196 (36%), Gaps = 25/196 (12%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI 1228
L QV ++ L V+DQHAA ERI E + G L L LP
Sbjct: 518 LGQVAGTYLACAGPDGLYVVDQHAAHERIYFERFLAQGAGQAGVPAQLLAVPVVLDLPAS 577
Query: 1229 GYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFG--VNLSD 1286
Y LL A + G+ I G RS + + AVP S
Sbjct: 578 EYALLLEQAAAVARMGF--QIEPFGPRS--------------VAVRAVPAALADRPAPSL 621
Query: 1287 VDLLEFLQQLADTDGSSTTPPSV-----LRVLNSKACRGAIMFGDSLLPSECALIVEELK 1341
+ L G P + R+L AC+ AI GD L P E A ++ +L
Sbjct: 622 LADLLARLLAEAVRGGGEEAPVLDTDRAARIL--AACKAAIKAGDRLHPQEMAQLLADLA 679
Query: 1342 QTSLCFQCAHGRPTTV 1357
+ + C HGRPT +
Sbjct: 680 RCRQPYACPHGRPTVI 695
>gi|421490197|ref|ZP_15937571.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus anginosus SK1138]
gi|400373602|gb|EJP26530.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus anginosus SK1138]
Length = 648
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 177/356 (49%), Gaps = 31/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 1 MSKIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLKSIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEAL SI+ VS L I T +G
Sbjct: 61 GEGIEHEEVSLALRRHATSKIKKQADL---FRIRTLGFRGEALPSIASVSRLTIETATNG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + +G + I+ GT + DLF+N P R KYM+S ++ H V
Sbjct: 118 GTHGTLLIAQGGEI--ETIEPSSCPRGTKIKVEDLFFNTPARLKYMKSQQAELSHIV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+V+ FI + EL T + + + +G+ + E++A+D E
Sbjct: 175 MNRLSLAHPEVA--FILLNDGKELTRTAGTGNLRQAIAGIYGLTTAKKMIEISASDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 233 VSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
SK P ++++R L D+ P K V ++A I +AI SA +K+
Sbjct: 274 SKLMVGRFPIAVIDIRIDPYLADVNVHPTKQEVRISKERELMALISQAI-SASLKE 328
>gi|374854606|dbj|BAL57483.1| DNA mismatch repair protein MutL [uncultured Chloroflexi bacterium]
Length = 579
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 174/349 (49%), Gaps = 26/349 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LP V + + +G V+ VV+EL+ N++DAGA +V V + ++VVDDG G
Sbjct: 3 IRVLPPEVASQIAAGEVIERPVSVVKELIENALDAGAHQVQVRLLQAGRRLIEVVDDGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + L L +RHATSK+ + +D I T GFRGEALASI+ VS L I ++ +
Sbjct: 63 IPPEELSLAVQRHATSKI---SCAEDLYSIHTLGFRGEALASIAAVSHLTITSRTAESEH 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G R ++G + L G++ GT V LFYN P R K++++ + ++ + R
Sbjct: 120 GMRIRLEGGRVL--GMESVGAPPGTLVRVEHLFYNLPARLKFLKTDLTE-RRAIDVLLSR 176
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
AL +P+V F E E+ LL T A+L + +G+E L EV +G L +SG
Sbjct: 177 YALAYPQVRFTL--KEGENLLLQTAGDGDRRAILAALYGVEVARPLIEVQEEEGGLRLSG 234
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+IS P + S + ++N R+V P+ L +A + L R
Sbjct: 235 FISPPGITRSNRREIAFFVNGRWVQDVPLATAL------------LQAYHTLLMVGR--- 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
P L L P D+ P K V F++ + + +F++RA+R A +
Sbjct: 280 --YPLAFLFLEVPPQDVDVNVHPAKAEVRFREADRIFSFVQRAVRRALL 326
Score = 41.6 bits (96), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 33/218 (15%)
Query: 1161 SCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLE----ELRHKVLSGEGKSVAY 1216
S L +++ Q+ ++ L +IDQHAA ERI E ELR K L+ +
Sbjct: 384 SGLPLLRLIGQLANTYLLAEGPDGLYLIDQHAAHERILFEKFLNELREKRLNSQA----- 438
Query: 1217 LDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAV 1276
L + + P LL++ ++ +G+ + G +F + A+
Sbjct: 439 LLSPVVVTFPPHQATLLESQLPSLEHFGF--EVIAFGPHTFQ--------------IRAI 482
Query: 1277 PCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKAC-RGAIMFGDSLLPSEC 1333
P +F + D L+ L + TP + L ++ C R AI G L P+E
Sbjct: 483 PALF----ATADPTAALRALVEDFEEDETPLQQEQEARLAARICKRLAIKAGQDLSPAEQ 538
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQ 1371
+VEEL++ C HGRPT + L +++ L +Q +
Sbjct: 539 RALVEELERCQSPRTCPHGRPTMIHL-SVDLLERQFGR 575
>gi|322388580|ref|ZP_08062180.1| exopolyphosphatase [Streptococcus infantis ATCC 700779]
gi|419843708|ref|ZP_14367016.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus infantis ATCC 700779]
gi|321140500|gb|EFX36005.1| exopolyphosphatase [Streptococcus infantis ATCC 700779]
gi|385702605|gb|EIG39747.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus infantis ATCC 700779]
Length = 649
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 197/435 (45%), Gaps = 42/435 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVKLALRRHATSKIKSQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGQV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMVEIENADLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P +++++ L D+ P K V ++A + AI K +
Sbjct: 274 SKLMVGRFPLAVIHIQIDPYLADVNVHPTKQEVRISKERELMALVSEAI----AKSLKEQ 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+ D LE+ +R + Q++ L + L + E R T E
Sbjct: 330 TLIPDALENLAKSTVRNREKVEQTTLPLRENTL--------YYEKNEPNRPTQAEVADHQ 381
Query: 418 VELAEENTEMEFFSQ 432
V L EE ++ F++
Sbjct: 382 VNLTEERQDLNLFAK 396
>gi|337282895|ref|YP_004622366.1| DNA mismatch repair protein HexB [Streptococcus parasanguinis ATCC
15912]
gi|335370488|gb|AEH56438.1| DNA mismatch repair protein HexB [Streptococcus parasanguinis ATCC
15912]
Length = 693
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 219/462 (47%), Gaps = 46/462 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ V + +++ D+
Sbjct: 47 MSQIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIRITDN 106
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ AD+ I T GFRGEA+ SI+ VS+L ++T G
Sbjct: 107 GEGIAHDEVALALRRHATSKIKSQADL---FRIRTLGFRGEAMPSIASVSILTLLTAQEG 163
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V KG + ++ VGT + DLF+N P R KY++S ++ H V
Sbjct: 164 AVHGTKLVAKGGEI--EEVEPATSPVGTKITVEDLFFNTPARLKYLKSQQAELSHIV-DI 220
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+++F I+ E+ T + + + +G+ + + D E
Sbjct: 221 LNRLSLAHPEIAFTLIN--DGKEMTKTAGTGNLRQAIAGVYGLASAKKIVAIENRDLDFE 278
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + + + + ++IN RY+ + LLN DS+ G +
Sbjct: 279 VTGFVSLPELTRANRNYISLFINGRYIK----NFLLNRA-----ILDSY--------GSK 321
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P ++N++ L D+ P K V ++A I +AI +A ++
Sbjct: 322 LMVGRFPLAIINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIANALKEQ------ 375
Query: 360 DVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDPVE 419
D++ DA L S + + + PL K+ + +E + + DP
Sbjct: 376 --DLIPDALENLAKSTIRRTEKPVQT-TLPL----KENRLYYDRESQDFKLRPEVADPQR 428
Query: 420 -LAEEN-TEMEFFSQP--KHSSSLLDGSFAECLPIVPPKIDH 457
LA+E TE P K +S++ FAE +V ++DH
Sbjct: 429 PLADETATEARIQENPVEKPTSAI---KFAERKAVVYDELDH 467
>gi|392568483|gb|EIW61657.1| hypothetical protein TRAVEDRAFT_163075 [Trametes versicolor
FP-101664 SS1]
Length = 886
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 184/378 (48%), Gaps = 37/378 (9%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGS 61
G I LP + ++ +RS +L L +++ ELV NS+DA A V V + V DDG+
Sbjct: 15 GHITYLPSSTQSQLRSTQILTSLPQIISELVQNSLDANAHSVDVTLDPAEWECSVRDDGA 74
Query: 62 GISRDGLVLLG-----ERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK 116
GISRDGL +L R+ TSK A +D+ T TFGFRGEALAS +D++ LEI ++
Sbjct: 75 GISRDGLTVLAGGSQDGRYGTSKAYTPASLDEVT---TFGFRGEALASAADIACLEISSR 131
Query: 117 -AHGRPNGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
AH R + ++KG + L+ G I R+ GT V RD FYN P+RR+ ++ + +
Sbjct: 132 TAHSR-ESWSVILKGGQLLFAGPSIRWRREAPGTVVSIRDAFYNLPIRRRSHPNA-SRTI 189
Query: 174 HSVKKCVLRIALVHPKVSFKFID---------MESEDELLCTCSSSSPLALLISSFGIED 224
VK+ V ALV P VSF + S+ +L ++S LA +G
Sbjct: 190 ELVKREVEAFALVFPNVSFSLENARKDKAGTLARSKARVLTVPKTASTLAAFRHIYGKAL 249
Query: 225 FSFLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDC 284
++E+ + + G++S KA+Q++YIN + +H+ H+ A +
Sbjct: 250 ADEVEEIEEQCDGMRLEGFVS--LQGAYSKAYQFLYINKHPMATCDLHR---HIEAVYSR 304
Query: 285 S--------DSWKANNGFLKGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD 334
S + K N+ +RS K++ Y+LNL P D +P K V ++
Sbjct: 305 SSFNKHALEELGKTNDLTSSVRRSPRKAEKKAVYVLNLTIPPRFVDNCIEPAKAAVQLQN 364
Query: 335 WEPVLAFIERAIRSAWMK 352
+F+ I +K
Sbjct: 365 SSATASFLSSTIERVLLK 382
Score = 70.5 bits (171), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 44/57 (77%)
Query: 1306 PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1362
P ++ ++NSKACRGAIMF D+L +C ++++L T+L FQCAHGRP+ VPLV++
Sbjct: 807 PRELVELVNSKACRGAIMFNDTLTLEQCKNLLDKLSGTALPFQCAHGRPSLVPLVDV 863
>gi|421276200|ref|ZP_15727023.1| DNA mismatch repair protein mutL [Streptococcus mitis SPAR10]
gi|395878153|gb|EJG89220.1| DNA mismatch repair protein mutL [Streptococcus mitis SPAR10]
Length = 649
Score = 150 bits (378), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 212/464 (45%), Gaps = 48/464 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+EL+ N++DAG++++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELIENAIDAGSSQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++A + AI K +
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAI----AKSLKEQ 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK +++++++ E R T E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NNLYYEQTELTRPTQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQPK--HSSSLLDGSFAECLPIVPPKIDH 457
V L EE + F++ + FAE P ++DH
Sbjct: 380 HQVNLTEERQALNLFAKETLDQMTKPAKLHFAERKPASYDQLDH 423
>gi|417938905|ref|ZP_12582198.1| DNA mismatch repair protein [Streptococcus infantis SK970]
gi|343390350|gb|EGV02930.1| DNA mismatch repair protein [Streptococcus infantis SK970]
Length = 649
Score = 150 bits (378), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 207/462 (44%), Gaps = 44/462 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMVEIENADLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++A + AI K +
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAI----AKSLKEQ 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+ D LE+ +R + Q++ L + L + E R T E
Sbjct: 330 TLIPDALENLAKSTVRNREKVEQTTLPLRENTL--------YYERNEPIRPTQAEVADHQ 381
Query: 418 VELAEENTEMEFFSQPK--HSSSLLDGSFAECLPIVPPKIDH 457
V+L EE ++ F++ + FAE P ++DH
Sbjct: 382 VDLTEEKQDLNLFAKEALDQMTKPAKLHFAERKPASYDQLDH 423
>gi|401682833|ref|ZP_10814723.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. AS14]
gi|400184073|gb|EJO18320.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. AS14]
Length = 648
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 217/469 (46%), Gaps = 59/469 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 118 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 173 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 271 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ- 329
Query: 355 AHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S + Q+S L + L +Q D + +++
Sbjct: 330 -------DLIPDALENLAKSTVKRAAKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQL 382
Query: 409 TFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+F+E + E +E E P S+S+ FAE P+ ++DH
Sbjct: 383 SFEESAEPIHEATDEKAE------PPQSTSV---KFAERKPVSYDQLDH 422
>gi|125719036|ref|YP_001036169.1| DNA mismatch repair protein [Streptococcus sanguinis SK36]
gi|166232112|sp|A3CR14.1|MUTL_STRSV RecName: Full=DNA mismatch repair protein MutL
gi|125498953|gb|ABN45619.1| DNA mismatch repair protein, putative [Streptococcus sanguinis
SK36]
Length = 647
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 216/469 (46%), Gaps = 60/469 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDE---RKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 118 GRHGTLLVAQGGE-----IEEHVPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 173 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 271 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ- 329
Query: 355 AHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S + Q+S L + L KQ D + +++
Sbjct: 330 -------DLIPDALENLAKSTVKRASKPEQTSLPLKENRLYYDKKQNDFFLKPQVAEQQL 382
Query: 409 TFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+F+E K E +E E P+ +S FAE P+ ++DH
Sbjct: 383 SFEESAKPVHEATDEKAE------PQSTSV----KFAERKPVSYDQLDH 421
>gi|351712504|gb|EHB15423.1| DNA mismatch repair protein Mlh3 [Heterocephalus glaber]
Length = 1458
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 179/355 (50%), Gaps = 22/355 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V + V + V+V+D+G G+
Sbjct: 2 IKCLSVEVKAKLRSGLAINSLGQCVEELALNSIDAEAKCVAIRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ T K + D+++ +GFRGEALASI+D+ S +EI +K +
Sbjct: 62 GSDDIDKVGHRYFTGKCHSVQDLENPR---FYGFRGEALASIADLASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + + L D R GTTV +LFY PVRRK + P+ +++ V
Sbjct: 119 TFVKLFQNGRALKACEADLTRPSAGTTVTVYNLFYQLPVRRKCL--DPRLEFEKIRQRVE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLKEIHFRYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDCSDSWKANNGFLKGK- 298
GYISS ++ K Q++++N R + + +HKL++ L S C K NG +
Sbjct: 237 GYISS--EAHYNKNMQFLFVNRRLILRTKLHKLIDFLLRKESIIC----KPKNGSASRQM 290
Query: 299 ------RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
RS + Y++N+ C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 291 NSSPRHRSTPELHGIYVINVHCQFCEYDVCMEPAKTLIEFQNWDTLLICIQEGVK 345
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 126/301 (41%), Gaps = 75/301 (24%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLA-------- 1186
+D+SSG L P K + +VLQQVD KFI +
Sbjct: 1162 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTGENGEGGGN 1221
Query: 1187 ---VIDQHAADERIRLEEL--------------RHKVLSGEGKSVAYLDAEQELVLPEIG 1229
++DQHAA ERIRLE+L R K+LS + LD + + E
Sbjct: 1222 LLILVDQHAAHERIRLEQLITDSCEKQQPQGCGRKKLLSS--TIIPPLD----ITVTEEQ 1275
Query: 1230 YQLLQNFAEQIKDWGW------------------ICNIHTQGSRSFNKNLNLLQRQITVI 1271
+LL + + ++D G +C + + N L+R + +
Sbjct: 1276 RRLLWCYHKNLEDLGLEFTFPDTSDSLVLVGKVPLCFVEREA--------NELRRGRSTV 1327
Query: 1272 TLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPS 1331
T V + +E LQ G T P +V +VL S+AC GAI F D L P
Sbjct: 1328 TKSIVEEFIR------EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDHLSPE 1379
Query: 1332 ECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRG 1385
E ++E L L FQCAHGRP+ +PL +L+ L ++ +A+L ++ WH +
Sbjct: 1380 ESYRLIEALSWCQLPFQCAHGRPSMLPLADLDHLEQEKQTKPNLAKLRKMAQAWHLFGKA 1439
Query: 1386 E 1386
E
Sbjct: 1440 E 1440
>gi|315612294|ref|ZP_07887208.1| DNA mismatch repair protein HexB [Streptococcus sanguinis ATCC
49296]
gi|315315687|gb|EFU63725.1| DNA mismatch repair protein HexB [Streptococcus sanguinis ATCC
49296]
Length = 649
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 217/464 (46%), Gaps = 48/464 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGQV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTEVTRASQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQP--KHSSSLLDGSFAECLPIVPPKIDH 457
VEL EE ++ F++ + + FAE P+ ++DH
Sbjct: 380 HQVELTEEGQDLTLFAKETLEQLTKPAKLHFAERKPVSYDQLDH 423
>gi|291530259|emb|CBK95844.1| DNA mismatch repair protein MutL [Eubacterium siraeum 70/3]
Length = 677
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 187/358 (52%), Gaps = 38/358 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L ++V + +G V+ + V++ELV NS+DAGA + V + G+ Y+++
Sbjct: 1 MPEIRLLDKSVAELIAAGEVIERPSSVIKELVENSIDAGARHITVEIKHGGIS--YMRIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
DDG GI+ D + RHATSK+ DD TGI T GFRGEALAS++ V+ +E++++
Sbjct: 59 DDGCGIAYDQMPTAFLRHATSKI---RTGDDLTGIMTMGFRGEALASVAAVAKIEMMSRQ 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKD----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
G G R +++G G + E + GTT+V ++LFYN P R K+++ +
Sbjct: 116 DGDELGGRYIIEG------GEEKEHESCGCPTGTTIVIKELFYNTPARLKFLKKDISEG- 168
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
+ + V R+AL HP +SF+FI + T S L+ + FG + L V+
Sbjct: 169 NFIAATVDRLALSHPDISFRFI--RDNKSVRMTSGDGSLLSAAKAVFGRQFADSLIPVDF 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+ +++SGY+SSP + ++ Q ++N+RY+ K +AA ++++ N
Sbjct: 227 SLNGIDVSGYVSSPLFCRNSRSMQTFFVNTRYI------KSTTCMAA---LEEAYR--NS 275
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
+ GK PA +LN+ D+ P KT + F +PV + A+++A +
Sbjct: 276 MMVGK------FPACILNISLSPETVDVNVHPAKTEIRFAYEKPVFDAVYFAVKNALV 327
Score = 45.1 bits (105), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 26/196 (13%)
Query: 1166 AKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVL 1225
+V+ + K +I AG L +ID+HAA ERIR E+L+ + ++ + L + EL L
Sbjct: 494 VRVIGEFLKTYILCEAGEELIIIDKHAAHERIRFEKLKEEFVT----TSQLLIDKTELKL 549
Query: 1226 PEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLS 1285
Y+ L + E ++ G + L+ + + + A+P + +
Sbjct: 550 SPEEYEALHEYYEYVEQSG----------------IELVFCDDSTVQITAMPSVVKCSPQ 593
Query: 1286 DVDLLEFLQQLADTDGSSTTPPSVL--RVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1343
++ + + Q+L +T +T L +L++ AC+ AI D E + + +
Sbjct: 594 EI-VSDVAQRLMNT---ATDQKGALFDDMLHTMACKSAIKAHDDTDILELQALADRVMND 649
Query: 1344 SLCFQCAHGRPTTVPL 1359
C HGRP L
Sbjct: 650 RTIRFCPHGRPVMTSL 665
>gi|419778292|ref|ZP_14304185.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK10]
gi|383187307|gb|EIC79760.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK10]
Length = 649
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 217/464 (46%), Gaps = 48/464 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQITIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EKVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTEVTRASQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQP--KHSSSLLDGSFAECLPIVPPKIDH 457
VEL EE ++ F++ + + FAE P+ ++DH
Sbjct: 380 YQVELTEEGQDLTLFAKETLEQLTKPAKLHFAERKPVSYDQLDH 423
>gi|322386540|ref|ZP_08060167.1| DNA mismatch repair protein HexB [Streptococcus cristatus ATCC
51100]
gi|417921359|ref|ZP_12564850.1| DNA mismatch repair protein [Streptococcus cristatus ATCC 51100]
gi|321269459|gb|EFX52392.1| DNA mismatch repair protein HexB [Streptococcus cristatus ATCC
51100]
gi|342834042|gb|EGU68317.1| DNA mismatch repair protein [Streptococcus cristatus ATCC 51100]
Length = 648
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 216/466 (46%), Gaps = 54/466 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G V +G + + VGT + DLF+N P R KYM+S ++ H V
Sbjct: 118 GQHGTLLVAQGGEI--EKHEPTSSSVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D E
Sbjct: 175 INRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGY+S P + + + + + IN RY+ ++ N L G
Sbjct: 233 VSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 274 SKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERITFQ 411
D++ DA L S + Q+S L + L +Q D + ++++F+
Sbjct: 330 ----DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQLSFE 385
Query: 412 EFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
E K PV A + ++P+ +S FAE P+ ++DH
Sbjct: 386 ELAK-PVHQATDEK-----AEPQPTSV----KFAERKPVSYDQLDH 421
>gi|217967465|ref|YP_002352971.1| DNA mismatch repair protein MutL [Dictyoglomus turgidum DSM 6724]
gi|226723033|sp|B8E280.1|MUTL_DICTD RecName: Full=DNA mismatch repair protein MutL
gi|217336564|gb|ACK42357.1| DNA mismatch repair protein MutL [Dictyoglomus turgidum DSM 6724]
Length = 572
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 182/351 (51%), Gaps = 29/351 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDD 59
MG + LPE +RN + +G V+ VV+ELV NS+DAGA ++ V ++ + V+DD
Sbjct: 1 MGKVILLPEEIRNKIAAGEVIERPVSVVKELVENSIDAGAKRITVEFINGGETLISVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++++ +L R ATSK + +D I T GFRGEALASI+ VS +E+ +K
Sbjct: 61 GEGMTKEDAILALNRFATSK---IKTEEDLYNIKTLGFRGEALASIASVSKVEVRSKTET 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ KV G + I+ + GT + DLFYN P RRK+++S + + +
Sbjct: 118 EDGVFIKVEGG---VIQEINLWQGSKGTVIKVFDLFYNVPARRKFLKSKTTET-NLIVDF 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLIS-SFGIEDFSFLDEVNANDGAL 238
V RIA+ +P++SF+ I + +++ + S + L ++S F IE + L + +G
Sbjct: 174 VKRIAMAYPEISFQLIQ-DGKNKFI--TSGNGKLEDVVSLLFDIEIHNNLIFLQRKEGNY 230
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+IS P IS+K+ Y Y+N R+V I L A + +K N L+G
Sbjct: 231 IIEGFISKPGKLISLKSQDYFYVNRRWVRNNII------LQA---IKEGYK--NRLLEG- 278
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P ++ L P+ D+ P K + F+ + V F+ +AI+ A
Sbjct: 279 -----YFPFSIVFLTLPYHEVDVNVHPTKREIKFEKEKEVYEFVSKAIKEA 324
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 40/199 (20%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL------DAE 1220
+++ Q+ +I V + +IDQHAA ERIR EEL+ ++ G ++V L +E
Sbjct: 386 RIVGQIFDNYIIVETKDRVYIIDQHAAHERIRYEELKKELSLGYLQNVEILFPLVIEVSE 445
Query: 1221 QELVLPEIGYQLLQNFAEQIKDWG----WICNIHTQGSRSFNKNL-NLLQRQITVITLLA 1275
+E L LL+ FA +D+G I + + + +K++ NL Q I+
Sbjct: 446 EEKELLNKHKDLLEKFAFSWEDFGPYHIRIIRVPYEFLKFDSKSIENLFQEIIS------ 499
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1335
++S+ DL +L D +++ S AC AI G+ L+ E +
Sbjct: 500 -------DISEKDL----SKLED------------KIIKSMACHSAIRSGNILVREEMEV 536
Query: 1336 IVEELKQTSLCFQCAHGRP 1354
++ + + + C HGRP
Sbjct: 537 LINLIFERKIPLTCPHGRP 555
>gi|71908777|ref|YP_286364.1| DNA mismatch repair protein MutL [Dechloromonas aromatica RCB]
gi|71848398|gb|AAZ47894.1| DNA mismatch repair protein MutL [Dechloromonas aromatica RCB]
Length = 615
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 172/350 (49%), Gaps = 33/350 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M TI RLP+ + + + +G V+ V++EL+ NS+DAG+ + V++ +++ DD
Sbjct: 9 MPTIARLPDLLISQIAAGEVVERPASVLKELLENSLDAGSKAIQVHLEEGGVKLIRITDD 68
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+RD L L RHATSK+ L DD +GT GFRGEALAS++ V+ L I ++ G
Sbjct: 69 GCGIARDELALALTRHATSKISSL---DDLERVGTLGFRGEALASVASVARLSITSRERG 125
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV--GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
+ ++ ++G G + E + GT V RDL++N P RRK+++S + H
Sbjct: 126 AAHAWK--LRGEP----GAEPEPAALMAGTVVEMRDLYFNTPARRKFLKSESTEFAHCA- 178
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
V R+AL P V+ I + L + + + G E V+A GA
Sbjct: 179 DAVKRLALTRPDVA---ISLTHNGRNLFQLAPADAPRRIADILGDEFLGAARAVDAGTGA 235
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
L I G+ P + K QYV++N R+V K+++H +A L G
Sbjct: 236 LSIGGFAIDPTRATDAKDGQYVFVNGRFVRD----KIISHAL--------REAYRDVLHG 283
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
R PA L + +L D+ P KT V F+D + F+ AI+
Sbjct: 284 SRQ-----PAVCLFVNIDPALVDVNVHPAKTEVRFRDSRAMHQFVFHAIQ 328
>gi|422879899|ref|ZP_16926364.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1059]
gi|422929745|ref|ZP_16962686.1| DNA mismatch repair protein HexB [Streptococcus sanguinis ATCC
29667]
gi|422932711|ref|ZP_16965642.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK340]
gi|332365310|gb|EGJ43073.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1059]
gi|339614338|gb|EGQ19040.1| DNA mismatch repair protein HexB [Streptococcus sanguinis ATCC
29667]
gi|339618462|gb|EGQ23060.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK340]
Length = 689
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 217/470 (46%), Gaps = 61/470 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 42 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 101
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 102 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 158
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 159 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 213
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + +G+ + E++A+D
Sbjct: 214 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGDLRQAIAGIYGLATAKKMVEISASDL 270
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 271 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 311
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 312 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ- 370
Query: 355 AHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKN----LAKQRDHMF---HKECER 407
D++ DA L S + + S PLK K++D F H ++
Sbjct: 371 -------DLIPDALENLAKSTVK-RATKPEQTSLPLKENRLYYDKEQDDFFLKPHVSEQQ 422
Query: 408 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
++F+E + E A+E +E P +S+ FAE P ++DH
Sbjct: 423 LSFEESAETVHEAADEKSE------PPQPTSV---KFAERKPASYDQLDH 463
>gi|307710211|ref|ZP_07646654.1| DNA mismatch repair protein mutL [Streptococcus mitis SK564]
gi|307618973|gb|EFN98106.1| DNA mismatch repair protein mutL [Streptococcus mitis SK564]
Length = 641
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 205/435 (47%), Gaps = 50/435 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+ ++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSNQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAMDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+ D LE+ L + R + T L PLK + +++++ E +Q
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKAEVADYQ------ 373
Query: 418 VELAEENTEMEFFSQ 432
VEL EE ++ F++
Sbjct: 374 VELTEEGQDLTLFAK 388
>gi|385259659|ref|ZP_10037827.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. SK140]
gi|385193574|gb|EIF40935.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. SK140]
Length = 649
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 207/454 (45%), Gaps = 45/454 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ V + +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENAIDAGSSQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMVEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-RSAWMKKIAH 356
SK P ++++ L D+ P K V ++A + AI +S + +
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAIAKSLKEQTLIP 333
Query: 357 DSFD---------VDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECER 407
D+ + + +E LPL+ + Q T L P +A DH + ER
Sbjct: 334 DALENLAKSTVRNREKVEQTILPLKENNLYYEQ--TELTRPPQAEVA---DHQVNLTEER 388
Query: 408 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLD 441
F K+ ++ + ++ F + S LD
Sbjct: 389 QDLNLFAKETLDQLTKPAKLHFAERKSISYDQLD 422
>gi|227513116|ref|ZP_03943165.1| DNA mismatch repair protein [Lactobacillus buchneri ATCC 11577]
gi|227083691|gb|EEI19003.1| DNA mismatch repair protein [Lactobacillus buchneri ATCC 11577]
Length = 651
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 168/354 (47%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
+ I+ LP + N + +G V+ VV+ELV N++DA +T++ + V +KVVDD
Sbjct: 4 LKQIHELPAILANQISAGEVVERPASVVKELVENAIDAHSTEIDITVEDSGLKLIKVVDD 63
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + RHATSK + + D + T GFRGEAL SIS VS +E+ T
Sbjct: 64 GDGIDSSQVQTAFLRHATSK---ITEQRDLFRVRTLGFRGEALPSISSVSNIELKTSTGS 120
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G V KG K + + RK GTTV+ LFYN P R KY+ SSP L +
Sbjct: 121 V--GTEVVFKGGKFISQQASESRK--GTTVIVSSLFYNTPARLKYL-SSPNTELSKISDI 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP+VSF FI + ELL T L +L + +G++ S + + + +
Sbjct: 176 VNRLALSHPEVSFSFIS--NGRELLRTSGRGDLLQVLGAIYGVKTVSKMQPIKSKTPDIS 233
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY+S P + S + + + +N RYV P+ K NG+ G +
Sbjct: 234 IDGYVSLPELTRSSRNYISLILNGRYVRNFPLTK---------------SVINGY--GSK 276
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P ++N+ +L D+ P K V + + + AIR K
Sbjct: 277 LMIGRFPIAVVNISADPALIDVNVHPTKQEVRISEEPKIGGMLSNAIREMLADK 330
>gi|220929118|ref|YP_002506027.1| DNA mismatch repair protein MutL [Clostridium cellulolyticum H10]
gi|219999446|gb|ACL76047.1| DNA mismatch repair protein MutL [Clostridium cellulolyticum H10]
Length = 665
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 180/356 (50%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
MG I L E N + +G V+ VV+ELV NS+DAGAT + V + G+ Y+K+
Sbjct: 1 MGRIIVLDENTSNKIAAGEVVEKPASVVKELVENSIDAGATSISVDIKNGGIS--YIKIA 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G G+ D + + ERHATSK+ D+D + T GFRGEALASI+ V+ +E++TK
Sbjct: 59 DNGIGMDEDDVEIAFERHATSKIKRAEDLD---SVITMGFRGEALASIASVASVELMTKT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G ++G + D R+ VGTT + +DLF+N P R K+++ + +
Sbjct: 116 AASAYGMYVHVRGGV-----LQDVRQTGCPVGTTFIIKDLFFNTPARYKFLKKDSTEAGY 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ + RIAL +P +SFK + ++ L+ T ++ +++ S +G E L +
Sbjct: 171 -ISDTISRIALGNPNISFKLTNGKT--PLIHTPGNNDLKSVIYSIYGKEIIKNLVHIEYA 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
D ++ISGYI P + S + +Q +YIN RYV KL+++ +A +
Sbjct: 228 DDKVKISGYIGKPEAARSNRNYQSLYINKRYVK----SKLVSY--------SVEQAFSSI 275
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
L R P ++LN+ L D P K V F D + I A+ +A
Sbjct: 276 LMKNR-----FPFFVLNIDINPILVDANVHPAKIEVRFADESYLSRTIYMAVSNAL 326
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 130/317 (41%), Gaps = 50/317 (15%)
Query: 1083 EETHKAENFKL---SLCPHAHLGA---------QAEGTSIISGTK---WRNGHPQTTNNN 1127
EE KA+ +L +L P A + Q TS + T+ + G P+ N
Sbjct: 370 EENKKADEIRLFTKALEPLAKVDVHKVSTAAEKQPADTSSFTFTRSEDYNVGQPKNLITN 429
Query: 1128 ISCDIHNQDNILDISSGLLHLTGEFFIPDSINK-----------SCLEDAKVLQQVDKKF 1176
+ + N D + + S G+ ++INK + L D K + Q +
Sbjct: 430 VKQE--NSDELKNNSPGIREDDSSQNFDETINKQDQEVNKERVYTELADMKYIGQAFSTY 487
Query: 1177 IPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNF 1236
I + L ++DQHAA ERI E+LR K S E + +L+L + QL
Sbjct: 488 ILLQNNDELVMVDQHAAHERIIYEKLRAKFDSQENTT--------QLLLEPVVIQLQPFE 539
Query: 1237 AEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL-LEFLQQ 1295
+ IK + F N I + +P + G + S D+ +E Q+
Sbjct: 540 IDTIKAKEKLLTGIGFVYEDFGNN---------TIIIRGIPYMVG-DYSPRDIFIELTQK 589
Query: 1296 LADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1355
L ++ +TP + ++++ AC+ AI L E ++ EL T + C HGRPT
Sbjct: 590 LQESIKPVSTPLAD-EIIHTIACKAAIKANKKLDEKEVHQLLTELSNTGRRYTCPHGRPT 648
Query: 1356 TVPLVN--LEALHKQIA 1370
+ L +E + K+I
Sbjct: 649 VIRLTKNEIEKMFKRIV 665
>gi|317131678|ref|YP_004090992.1| DNA mismatch repair protein MutL [Ethanoligenens harbinense YUAN-3]
gi|315469657|gb|ADU26261.1| DNA mismatch repair protein MutL [Ethanoligenens harbinense YUAN-3]
Length = 669
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 186/369 (50%), Gaps = 26/369 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+AV + +G V+ VV+EL+ N++DAGA + + + +++V DD
Sbjct: 1 MNRIQVLPKAVAEKIAAGEVVERPASVVKELLENAIDAGAAALTLEIQNGGVRFIRVTDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI + + RHATSK+ D++ IGT GFRGEALAS++ VS +E+IT+
Sbjct: 61 GSGIPAEDVATAFLRHATSKVHTDGDLE---AIGTLGFRGEALASVTAVSKVELITRTAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G + L G + GTT++ RDLFYN P R K+++ + ++V+
Sbjct: 118 ELEGTRIALAGGEVLEQGPAGCPQ--GTTILVRDLFYNTPARMKFLKKDVTEG-NAVRAV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
R+AL HP++S KFI E+ L T L+ + + G + L V+ G++
Sbjct: 175 AERLALSHPEISLKFIKDGREE--LHTPGDGKLLSAVHAVLGRDFARDLLPVDYALGSVR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G++ P + + + Q+ ++N R V K +AA ++K + + G+
Sbjct: 233 ITGFVLKPVSARANRNMQFFFLNGRLV------KSRTAMAA---LEQAYKGS--IMVGR- 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P +L++ P +L D+ P KT V F D V + A+++ +K +
Sbjct: 281 -----FPGCVLHIALPPALVDVNVHPAKTEVRFADEHAVFEAVYYAVKNTIAEKDTRPAL 335
Query: 360 DVDMLEDAE 368
+ E A+
Sbjct: 336 RLPGTEQAK 344
Score = 48.1 bits (113), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
+V+ Q + +I V G L +ID+HAA ERI EE++ + G+ L +
Sbjct: 486 RVVGQCFETYILVEEGDALYLIDKHAAHERILYEEIKKQ---GQAAGQLLLAPRAVTLAR 542
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1286
E +L+NFA +++ G+ ++ G + + + + P V L +
Sbjct: 543 EEYAAVLENFA-LLRETGF--DMEDFGGAT--------------VLVRSAP----VYLRE 581
Query: 1287 VDLLEFLQQLADTD---GSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1343
+++ +++LA G TP + + +S ACR A+ GD P E A + + + +
Sbjct: 582 SEIVPAVEELAGKLAGFGKDLTPERIDELYHSVACRAAVKAGDKTGPEEAARLAKRVLEL 641
Query: 1344 SLCFQCAHGRPTTVPLVNLEALHKQIAQ 1371
C HGRP L E + KQ +
Sbjct: 642 DDVRYCPHGRPVAFVLTRGE-IEKQFGR 668
>gi|20455140|sp|Q9CDL1.2|MUTL_LACLA RecName: Full=DNA mismatch repair protein MutL
Length = 656
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 174/352 (49%), Gaps = 30/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ ++ + L RHATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRHATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSTAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 118 EESGTKLVAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D E
Sbjct: 175 INRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
++GY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 233 LTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGYG 273
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
R P +L+++ +L D+ P K V ++A I +AI A
Sbjct: 274 NRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAIDEA 325
>gi|306828751|ref|ZP_07461943.1| DNA mismatch repair protein HexB [Streptococcus mitis ATCC 6249]
gi|304428929|gb|EFM32017.1| DNA mismatch repair protein HexB [Streptococcus mitis ATCC 6249]
Length = 649
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQITIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EKVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E + + E
Sbjct: 330 ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSKPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL EE ++ F+Q
Sbjct: 380 HQVELTEEGKDLTLFAQ 396
>gi|116513153|ref|YP_812060.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris
SK11]
gi|385839547|ref|YP_005877177.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris A76]
gi|123025082|sp|Q02VS5.1|MUTL_LACLS RecName: Full=DNA mismatch repair protein MutL
gi|116108807|gb|ABJ73947.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris SK11]
gi|358750775|gb|AEU41754.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris A76]
Length = 656
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 227/493 (46%), Gaps = 56/493 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ V V ++V D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKITVSVEEAGLRLIEVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ ++ + L RHATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRHATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSNAQ 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + + KG L + K +GT + +LFYN P R KY++S ++ H +
Sbjct: 118 EEAGTKLIAKGGTIETL--EPLAKRLGTKISVANLFYNTPARLKYIKSLQAELSH-ITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP++SF ++ E L T + ++ + +GI + E+N +D E
Sbjct: 175 INRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMREINGSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
++GY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 233 LTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGYG 273
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
R P +L+++ L D+ P K V ++ I +AI A ++
Sbjct: 274 NRLMVGRFPFAVLSIKIDPKLADVNVHPTKQEVRLSKERELMTLISKAIDEA----LSEG 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+ LE+ + ++ S Q+ L ++PL ++D +E F+ + D
Sbjct: 330 VLIPEALENLQGRVKEKETVSVQTELPLQNNPLYYDNVRQDFFVREEA---IFEINKNDN 386
Query: 418 VE-LAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDHRVWTIESS-WFQDHQPSRH 475
+ L E+N+ +QP+ S V KI R T+ESS F D P
Sbjct: 387 SDSLTEQNSTDYTVNQPETGS-------------VSEKITDR--TVESSNEFTDRTPKNS 431
Query: 476 L--FSPPLENLKK 486
+ F +N++K
Sbjct: 432 VSNFGVDFDNIEK 444
>gi|322392517|ref|ZP_08065977.1| DNA mismatch repair protein HexB [Streptococcus peroris ATCC
700780]
gi|321144509|gb|EFX39910.1| DNA mismatch repair protein HexB [Streptococcus peroris ATCC
700780]
Length = 649
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 207/465 (44%), Gaps = 50/465 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+ ++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSNQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGQV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ D E
Sbjct: 175 VNRLGLAHPEISFSLIC--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMVEIENADLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++A + AI K +
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAI----AKSLKEQ 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFH---KECERITFQEFQ 414
+ D LE+ +R + Q++ L R++ F+ E R T E
Sbjct: 330 TLIPDALENLAKSTVRNREKVEQTTLPL-----------RENTFYYEKNEPTRPTQAEVA 378
Query: 415 KDPVELAEENTEMEFFSQPK--HSSSLLDGSFAECLPIVPPKIDH 457
V L EE ++ F++ + FAE P ++DH
Sbjct: 379 DHQVNLTEEKQDLNLFAKEALDQMTKPAKLHFAERKPASYDQLDH 423
>gi|347754192|ref|YP_004861756.1| DNA mismatch repair protein MutL [Candidatus Chloracidobacterium
thermophilum B]
gi|347586710|gb|AEP11240.1| DNA mismatch repair protein MutL [Candidatus Chloracidobacterium
thermophilum B]
Length = 656
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 173/351 (49%), Gaps = 26/351 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+ V N + +G V+ +V+E + N++DA A ++ + V +++ DD
Sbjct: 1 MSKIRILPDVVANRIAAGEVVERPASIVKECLENALDAQAHQIDLAVERGGKESIRIRDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+++D +L ERHATSK+ ++ I TFGFRGEALA+I V+ + + TK HG
Sbjct: 61 GEGMTQDDAILAFERHATSKI---RTAEELMAIQTFGFRGEALAAIGSVARVTLTTKLHG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G ++G K + + + GT ++ RDLF+N P RRK++++ + H +
Sbjct: 118 ATSGTEVCLEGGKLRH--VREVAAPGGTEILVRDLFFNLPARRKFLKTEATEAFH-ITNL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V AL HP+ F + ++L +++ A FG L V G +
Sbjct: 175 VTHYALAHPQCGFTL--QHNGRQVLAVTATTDLRARAYQLFGANMLDSLAPVEFAQGGIA 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ G++S P+ + + QY+++N R+V I + L SD+++ N G
Sbjct: 233 VGGFVSRPHVQRTSRDGQYLFVNRRFVRDKLIGRAL---------SDAYR--NILPPG-- 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
PA +L + P + D+ P KT V F+ + VL I A++ A
Sbjct: 280 ----VFPAAMLFVEVPPDMVDVNVHPQKTEVRFRTPQHVLESIVTAVQQAL 326
>gi|302391924|ref|YP_003827744.1| DNA mismatch repair protein MutL [Acetohalobium arabaticum DSM
5501]
gi|302204001|gb|ADL12679.1| DNA mismatch repair protein MutL [Acetohalobium arabaticum DSM
5501]
Length = 660
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 179/348 (51%), Gaps = 26/348 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I +LP+ V + + +G V+ VV+ELV NS+DA + K+ + V ++V+D G G
Sbjct: 5 IKKLPQEVVSKIAAGEVIERPASVVKELVENSIDADSDKIEIKVNNGGKDLIQVIDTGYG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++R+ L ERHATSK+ + +D I + GFRGEAL SI+ +S L + T+ +
Sbjct: 65 MTREDAELALERHATSKI---TEANDLFSIRSLGFRGEALPSIAAISRLTMKTRTEDKLG 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + G + I+D +GT ++ +DLFYN PVR KY+++S ++ + V R
Sbjct: 122 GTLVKINGGEIK--KIEDAGCPIGTNIIVKDLFYNTPVRYKYLKTSATEI-RRISDIVNR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL +P+++FK ++ ++L T + + + ++S +G E + V+ D +++SG
Sbjct: 179 LALAYPEITFKL--SHNQKKVLETPGNGNLMDTILSVYGKEVAKSMIAVDYEDKYMQVSG 236
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
Y+S P S + K Q +IN RY+ + + ++ KA + L R
Sbjct: 237 YVSKPNISRASKKHQSFFINRRYIKSRALSEAIS------------KAYHTLLAKGRH-- 282
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
P +L ++ L D+ P K V F + V + ++ ++ A
Sbjct: 283 ---PIAILTIKLNPVLVDVNVHPTKMEVNFSREKEVASVLQNGVKEAL 327
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 27/194 (13%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL-DAEQELVLPE 1227
L Q+ +I ++DQHAA ERI EL K E KS + L EL PE
Sbjct: 475 LGQIHNTYIIAQGEDGFYIVDQHAAHERILYNELMEKFKQAEIKSQSLLMPVRLELTNPE 534
Query: 1228 IGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDV 1287
I ++L+ +E +K+ G+ G +++ + AVP + L +
Sbjct: 535 I--EILEENSEHLKNLGF--EFEAFGGQTY--------------LVRAVPNL----LHKL 572
Query: 1288 DLLEFLQQLADT---DGSSTTPPSVLR-VLNSKACRGAIMFGDSLLPSECALIVEELKQT 1343
D+ E + D G P ++ +L +CRGAI G SL+P E ++++L+++
Sbjct: 573 DIKELCLDIIDNLLDKGKIQEPTEIIEDLLVIMSCRGAIKSGKSLVPGEMESLLQQLEES 632
Query: 1344 SLCFQCAHGRPTTV 1357
C HGRPT +
Sbjct: 633 GNQHTCPHGRPTII 646
>gi|160938811|ref|ZP_02086162.1| hypothetical protein CLOBOL_03705 [Clostridium bolteae ATCC
BAA-613]
gi|158437774|gb|EDP15534.1| hypothetical protein CLOBOL_03705 [Clostridium bolteae ATCC
BAA-613]
Length = 763
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 174/354 (49%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L ++ N + +G V+ VV+EL+ N+VDA AT V V + C ++V D+
Sbjct: 1 MANITVLDQSTINKIAAGEVIERPASVVKELLENAVDAHATAVTVEIKDGGCSMIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI ++ + L RHATSK+ ++D I + GFRGEALASI+ V+ +E+ITK
Sbjct: 61 GWGIPKEEIPLAFLRHATSKI---KTVEDLFTISSLGFRGEALASIAAVAQVELITKTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R ++G + G+++ GTT+++R+LFYN P R+K++++ + H V
Sbjct: 118 SLTGSRYQIEGG--VEKGLEEIGAPDGTTIIARNLFYNTPARKKFLKTPMTEGAH-VAAL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V +IAL HP +S +FI ++ L T + + L+ + FG E L V N+ +
Sbjct: 175 VEKIALSHPDISIRFI--QNNQNKLYTSGNHNLKDLIYTVFGREIAGNLLPVEINEDWIT 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G+ P + S + ++ +IN RY+ I K + + +
Sbjct: 233 VTGFTGKPVIARSNRNYENYFINGRYIKSSIISKAIEEAYKPYMMQHKY----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +L+ D+ P K + F D E V + RA+ +A K
Sbjct: 282 ------PFTMLHFHIEPDTLDVNVHPTKMELRFADGEKVYHAVLRAVSNALAHK 329
>gi|307705926|ref|ZP_07642763.1| DNA mismatch repair protein mutL [Streptococcus mitis SK597]
gi|307620522|gb|EFN99621.1| DNA mismatch repair protein mutL [Streptococcus mitis SK597]
Length = 649
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 207/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTESTRPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL EE ++ F++
Sbjct: 380 YQVELTEEGQDLTLFAK 396
>gi|357055418|ref|ZP_09116486.1| hypothetical protein HMPREF9467_03458 [Clostridium clostridioforme
2_1_49FAA]
gi|355382537|gb|EHG29634.1| hypothetical protein HMPREF9467_03458 [Clostridium clostridioforme
2_1_49FAA]
Length = 687
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 173/354 (48%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L ++ N + +G V+ VV+EL+ N++DA AT V V + C ++V D+
Sbjct: 1 MANITVLDQSTINKIAAGEVIERPASVVKELLENAIDAHATAVTVEIKDGGCSMIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI ++ + L RHATSK+ ++D I + GFRGEALASI+ V+ +E+ITK
Sbjct: 61 GWGIPKEEIPLAFLRHATSKI---KTVEDLFTISSLGFRGEALASIAAVAQVELITKTGN 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R ++G + G+D+ GTT+++R LFYN P R+K++++ + H V
Sbjct: 118 SLTGSRYQIEGG--VEKGLDEIGAPEGTTIIARSLFYNTPARKKFLKTPMTEGAH-VAAL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V +IAL HP +S +FI ++ L T + + L+ + FG E L V N+ +
Sbjct: 175 VEKIALSHPDISIRFI--QNNQNKLYTSGNHNLKDLIYTVFGREIAGNLLPVEINEDWIT 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G+ P + S + ++ +IN RY+ I K + + +
Sbjct: 233 VTGFTGKPVIARSNRNYENYFINGRYIKSTIISKAIEEAYKPYMMQHKY----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +L+ D+ P K + F D E V + RA+ +A K
Sbjct: 282 ------PFTMLHFHIEPDTLDVNVHPTKMELRFADGEKVYNAVLRAVSNALAHK 329
>gi|119899416|ref|YP_934629.1| DNA mismatch repair protein [Azoarcus sp. BH72]
gi|119671829|emb|CAL95743.1| DNA mismatch repair protein [Azoarcus sp. BH72]
Length = 621
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 180/379 (47%), Gaps = 34/379 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I RLP+ + N + +G V+ V++E++ N+VDAGA V V + GV +++
Sbjct: 1 MPQIQRLPDLLVNQIAAGEVVERPASVLKEVLENAVDAGARAVEVQLEQGGVRR--IRIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
DDG GI+RD L L ERHATSK +A +DD +GT GFRGEALA+I+ V+ I ++A
Sbjct: 59 DDGCGIARDELALALERHATSK---IATLDDLERVGTMGFRGEALAAIAGVARTVITSRA 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G + +R + GS + + GT V DL+YN P RRK+++S + H
Sbjct: 116 EGAAHAWR--IDGSD---RSLAPAALNQGTVVDVADLYYNTPARRKFLKSEGTEYAHC-D 169
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R+AL P ++ + + + P+ + + G + + V A G
Sbjct: 170 EVFRRVALARPDIALQ---LSHNGRVAHRLPVGEPVRRIAALMGDDFLAQARAVVAEGGP 226
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
L ++GY S P S + + QY ++N R+V KLL H +A L G
Sbjct: 227 LRLTGYASLPAYSRASRDAQYFFVNGRFVRD----KLLTHAL--------RQAYADILHG 274
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
R PAY+L L + D+ P K V F+D V F+ A+ A + A
Sbjct: 275 ARH-----PAYVLFLELDPAGVDVNVHPAKIEVRFRDSRAVHQFVFHAVSRALAESGAAL 329
Query: 358 SFDVDMLEDAELPLESSRF 376
+ E A LP R
Sbjct: 330 AGGNGAGEPAPLPSSGQRV 348
>gi|227524331|ref|ZP_03954380.1| DNA mismatch repair protein [Lactobacillus hilgardii ATCC 8290]
gi|227088562|gb|EEI23874.1| DNA mismatch repair protein [Lactobacillus hilgardii ATCC 8290]
Length = 651
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 167/351 (47%), Gaps = 28/351 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYV-KVVDDGSG 62
I+ LP + N + +G V+ VV+ELV N++DA +T++ + V V KVVDDG G
Sbjct: 7 IHELPAILANQISAGEVVERPASVVKELVENAIDAHSTEIDITVEDSGLKVIKVVDDGDG 66
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + RHATSK + + D + T GFRGEAL SIS VS +E+ T
Sbjct: 67 IDSSQVQTAFLRHATSK---ITEQRDLFRVRTLGFRGEALPSISSVSNVELKTSTGSV-- 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V KG K + + RK GTTV+ LFYN P R KY+ SSP L + V R
Sbjct: 122 GTEVVFKGGKFISQQASESRK--GTTVIVSSLFYNTPARLKYL-SSPNTELSKISDIVNR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP+VSF FI + ELL T L +L + +G++ S + + + + I G
Sbjct: 179 LALSHPEVSFSFIS--NGRELLRTSGRGDLLQVLGAIYGVKTVSKMQPIKSKTPDISIDG 236
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
Y+S P + S + + + +N RYV P+ K NG+ G +
Sbjct: 237 YVSLPELTRSSRNYISLILNGRYVRNFPLTK---------------SVINGY--GSKLMI 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P ++N+ +L D+ P K V + + + AIR K
Sbjct: 280 GRFPIAVVNISADPALIDVNVHPTKQEVRISEEPKIGGMLSNAIREMLADK 330
>gi|385831794|ref|YP_005869607.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
CV56]
gi|326407802|gb|ADZ64873.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
CV56]
Length = 656
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 174/352 (49%), Gaps = 30/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ ++ + L RHATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRHATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSTAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + + KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 118 EESGTKLIAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D E
Sbjct: 175 INRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
++GY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 233 LTGYVSIPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGYG 273
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
R P +L+++ +L D+ P K V ++A I +AI A
Sbjct: 274 NRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAIDEA 325
>gi|293364379|ref|ZP_06611105.1| DNA mismatch repair protein HexB [Streptococcus oralis ATCC 35037]
gi|307702655|ref|ZP_07639607.1| DNA mismatch repair protein mutL [Streptococcus oralis ATCC 35037]
gi|291317225|gb|EFE57652.1| DNA mismatch repair protein HexB [Streptococcus oralis ATCC 35037]
gi|307623771|gb|EFO02756.1| DNA mismatch repair protein mutL [Streptococcus oralis ATCC 35037]
Length = 649
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQITIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EKVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTEVTRASQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL EE ++ F++
Sbjct: 380 HQVELTEEGQDLTLFAK 396
>gi|227510188|ref|ZP_03940237.1| DNA mismatch repair protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190393|gb|EEI70460.1| DNA mismatch repair protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 651
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 168/354 (47%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYV-KVVDD 59
+ I+ LP + N + +G V+ VV+ELV N++DA +T++ + V V KVVDD
Sbjct: 4 LKQIHELPAILANQISAGEVVERPASVVKELVENAIDAHSTEIDITVEDSGLKVIKVVDD 63
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + RHATSK + + D + T GFRGEAL SIS VS +E+ T
Sbjct: 64 GDGIDSSQVQTAFLRHATSK---ITEQRDLFRVRTLGFRGEALPSISSVSNVELKTSTGS 120
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G V KG K + + RK GTTV+ LFYN P R KY+ SSP L +
Sbjct: 121 V--GTEVVFKGGKFISQQASESRK--GTTVIVSSLFYNTPARLKYL-SSPNTELSKISDI 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP+VSF FI + ELL T L +L + +G++ S + + + +
Sbjct: 176 VNRLALSHPEVSFSFIS--NGRELLRTSGRGDLLQVLGAIYGVKTVSKMQPIKSKTPDIS 233
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY+S P + S + + + +N RYV P+ K NG+ G +
Sbjct: 234 IDGYVSLPELTRSSRNYISLILNGRYVRNFPLTK---------------SVINGY--GSK 276
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P ++N+ +L D+ P K V + + + AIR K
Sbjct: 277 LMIGRFPIAVVNISADPALIDVNVHPTKQEVRISEEPKIGGMLSNAIREMLADK 330
>gi|307708033|ref|ZP_07644502.1| DNA mismatch repair protein MutL [Streptococcus mitis NCTC 12261]
gi|307615923|gb|EFN95127.1| DNA mismatch repair protein MutL [Streptococcus mitis NCTC 12261]
Length = 649
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 207/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERI--TFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E I + E
Sbjct: 330 TLIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTESIRSSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL EE ++ F++
Sbjct: 380 YQVELTEEGQDLTLFAK 396
>gi|281492891|ref|YP_003354871.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
KF147]
gi|281376543|gb|ADA66029.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
KF147]
Length = 656
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 174/352 (49%), Gaps = 30/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ ++ + L RHATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRHATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSTAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + + KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 118 EESGTKLIAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D E
Sbjct: 175 INRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
++GY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 233 LTGYVSIPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGYG 273
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
R P +L+++ +L D+ P K V ++A I +AI A
Sbjct: 274 NRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAIDEA 325
>gi|417847742|ref|ZP_12493704.1| DNA mismatch repair protein [Streptococcus mitis SK1073]
gi|339456576|gb|EGP69167.1| DNA mismatch repair protein [Streptococcus mitis SK1073]
Length = 649
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 207/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ +R ++ Q+ PLK + +++++ E R + E
Sbjct: 330 TLIPDALENLAKSTVRNRQKAEQTIL-----PLKE-----NTLYYEKTEPTRPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VELA+E ++ F++
Sbjct: 380 YQVELADEGQDLTLFAK 396
>gi|418964339|ref|ZP_13516153.1| DNA mismatch repair protein [Streptococcus anginosus subsp. whileyi
CCUG 39159]
gi|383341144|gb|EID19412.1| DNA mismatch repair protein [Streptococcus anginosus subsp. whileyi
CCUG 39159]
Length = 688
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 169/349 (48%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 41 MSKIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLRSIQVIDN 100
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEAL SI+ VS L I T
Sbjct: 101 GEGIEHEEVSLALRRHATSKIKKQADL---FRIRTLGFRGEALPSIASVSRLTIETATSS 157
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + +G + L D GT + DLF+N P R KYM+S ++ H V
Sbjct: 158 GAHGTLLIAQGGEVETL--DPSSCPRGTKIKVEDLFFNTPARLKYMKSQQAELSHIV-DV 214
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+V+F ++ E+ T + + + +G+ + E+ A+D E
Sbjct: 215 INRLSLAHPEVAFTLVN--DGKEMTRTAGTGNLRQAIAGIYGLTTAKKMIEILASDLDFE 272
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 273 VSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGYG 313
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
SK P ++++R L D+ P K V ++A I +AI
Sbjct: 314 SKLMVGRFPIAVIDIRIDPYLADVNVHPTKQEVRISKERELMALISQAI 362
>gi|160933109|ref|ZP_02080498.1| hypothetical protein CLOLEP_01952 [Clostridium leptum DSM 753]
gi|156868183|gb|EDO61555.1| DNA mismatch repair domain protein [Clostridium leptum DSM 753]
Length = 747
Score = 147 bits (370), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 180/354 (50%), Gaps = 30/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I+ L + V + +G V+ + V++ELV NS+DAGAT + V + G+ Y++V
Sbjct: 1 MAKIHVLEKHVAELIAAGEVVERPSSVIKELVENSIDAGATTISVEIQRGGIA--YMRVT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI+R+ + R+ATSK+ D+D GIGT GFRGEALASI VS + ++T+
Sbjct: 59 DNGGGIAREDVPKAFLRNATSKVESAEDLD---GIGTLGFRGEALASICAVSRVTLLTRT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G ++G + L L +D G T+V RDLFYN P R K+++ + ++V
Sbjct: 116 EEELAGTSYQIEGGEELAL--EDAGCAKGCTIVVRDLFYNTPARMKFLKKDVSEA-NAVA 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R AL HP++SF+F+ E L T + + + +G + + L V+
Sbjct: 173 GVMDRAALSHPEISFRFV--RDHKETLSTPGDRQLRSCIYAVYGKDFTAGLIPVDYAYNG 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+++ G+IS P + ++ Q+ +IN R+V + L +F S + G
Sbjct: 231 IKVRGFISKPSAARPNRSMQHFFINGRFVKS---KTAMVALEQAFKGS--------IMAG 279
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
K P+ +L+L P D+ P K V F + +P+ + ++SA +
Sbjct: 280 K------FPSCVLHLSVPWEAVDVNVHPSKIEVRFLNEKPIFDAVYHGVKSALL 327
>gi|422877524|ref|ZP_16923994.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1056]
gi|332360163|gb|EGJ37977.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1056]
Length = 647
Score = 147 bits (370), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 219/470 (46%), Gaps = 62/470 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATET 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 118 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 173 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 271 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ- 329
Query: 355 AHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKN----LAKQRDHMFHK---ECER 407
D++ DA L S + + S PLK K+R+ F K ++
Sbjct: 330 -------DLIPDALENLAKSTVK-RATKPEQTSLPLKENRLYYDKERNDFFLKPEVAEQQ 381
Query: 408 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
++F+E K PV A + S+P+ +S FAE P+ ++DH
Sbjct: 382 LSFEESAK-PVHQATDEK-----SEPQPTSV----KFAERRPVSYDQLDH 421
>gi|422822658|ref|ZP_16870851.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK353]
gi|422863623|ref|ZP_16910254.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK408]
gi|324989666|gb|EGC21610.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK353]
gi|327472200|gb|EGF17637.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK408]
Length = 688
Score = 147 bits (370), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 220/469 (46%), Gaps = 60/469 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 42 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 101
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 102 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 158
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 159 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 213
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 214 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 270
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 271 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 311
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 312 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAISTSLKEQ- 370
Query: 355 AHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S + Q+S L + L +Q D + +++
Sbjct: 371 -------DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQL 423
Query: 409 TFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+F+E DPV + NT+ + ++P+ +S FAE P ++DH
Sbjct: 424 SFEE-TADPV---QANTDEK--AEPQSTSV----KFAERKPASYDQLDH 462
>gi|422849892|ref|ZP_16896568.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK115]
gi|325689188|gb|EGD31195.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK115]
Length = 688
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 216/469 (46%), Gaps = 60/469 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 42 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 101
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 102 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 158
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ +GT + DLF+N P R KYM+S ++ H V
Sbjct: 159 GQHGTLLVAQGGE-----IEEHEPTSSPLGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 213
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 214 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 270
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 271 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 311
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 312 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ- 370
Query: 355 AHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S + Q+S L + L +Q D + +++
Sbjct: 371 -------DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQL 423
Query: 409 TFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+F+E K E +E E P+ +S FAE P+ ++DH
Sbjct: 424 SFEESAKPVHEATDEKVE------PQSTSV----KFAERKPVSYDQLDH 462
>gi|335028886|ref|ZP_08522402.1| DNA mismatch repair protein [Streptococcus infantis SK1076]
gi|334270253|gb|EGL88659.1| DNA mismatch repair protein [Streptococcus infantis SK1076]
Length = 649
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 197/435 (45%), Gaps = 42/435 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+ ++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSRQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF + E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSL--LSDGKEMTRTAGTGQLRQAIAGIYGLASAKKMVEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P +++++ L D+ P K V ++A + AI K +
Sbjct: 274 SKLMVGRFPLAVIHIQIDPYLADVNVHPTKQEVRISKERELMALVSEAI----AKSLKEQ 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+ D LE+ +R + Q++ L + L + E R E
Sbjct: 330 TLIPDALENLAKSTIRNREKVEQTTLPLRENTL--------YYEKNEPTRPKQAEVADHQ 381
Query: 418 VELAEENTEMEFFSQ 432
V L EE ++ F++
Sbjct: 382 VNLTEEKQDLNLFAK 396
>gi|409079515|gb|EKM79876.1| hypothetical protein AGABI1DRAFT_127557 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 857
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 175/381 (45%), Gaps = 33/381 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
+ +L E + +RS +L L ++V ELV NS+DA A + V V V DDGSG
Sbjct: 13 LAKLDEPTQARIRSTQILTTLPQIVSELVQNSLDAKANNISVSVNCAEWMCWVRDDGSGF 72
Query: 64 SRDGLVLLGERHATSKL--GHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
S+ L + E A+ + D + T+GFRGEALAS + VS LEI ++
Sbjct: 73 SKRDLEIFSEEDASQRYCTSKKYTPDSTNAVSTYGFRGEALASAAQVSCLEIASRTAKAH 132
Query: 122 NGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ + K + LY G I R+ GT V RD FYN PVRR K +++
Sbjct: 133 TTWSIIKKAHEVLYQGEAIRWRRESPGTVVCVRDAFYNLPVRR-LSHPPAAKTWELIRQE 191
Query: 180 VLRIALVHPKVSFKFIDMES------EDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
V ALV P V+F D+E + + +SS L+ +G + V+A
Sbjct: 192 VEAYALVSPSVAFVLEDLERNRGSGPDTRTMRIPKTSSILSTFRHLYGRALSERVAIVDA 251
Query: 234 NDGALEISGYIS--------SP-YD------SISVKAFQYVYINSRYVCKGPIHKLLNHL 278
DG + G+IS +P YD S +++ FQ++YINSR V +H+L++
Sbjct: 252 ADGMMRAEGFISLHGASSKVTPNYDLPAVRSSHAIQIFQFLYINSRPVSLCDLHRLIDIQ 311
Query: 279 AA-------SFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVV 331
+ SFD + + K + P Y+LN+ P D FDP KT V
Sbjct: 312 FSSSSFGKNSFDSRNEVGDTQVGTRHSPRKLEMKPVYVLNVLIPSGEVDNGFDPTKTIVA 371
Query: 332 FKDWEPVLAFIERAIRSAWMK 352
KD V++F+ +R +K
Sbjct: 372 LKDKNSVISFLISIVRGFLVK 392
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 118/298 (39%), Gaps = 80/298 (26%)
Query: 1142 SSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFI------------------------ 1177
S+ L H + + I +S L A ++ QVD KFI
Sbjct: 558 SADLQHFSPQRSISGFYTRSDLVTATIVGQVDLKFIACLIPTHDYGHGEAESTLPNEVAI 617
Query: 1178 PVVAGGTLAVIDQHAADERIRLEELRHKVLSG-----EGKSVAYLDAEQELVLPE----I 1228
P TL +IDQHAADERIR+E ++ G +GK+ E + P +
Sbjct: 618 PNHDALTLVLIDQHAADERIRVEAFLEELCLGFLNNRDGKADPTRRIELRTLAPPKPVLV 677
Query: 1229 GYQLLQNFAEQ------IKDWGW-ICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFG 1281
+ L+ E ++WG + T GS S R + + A+P I
Sbjct: 678 TWHELRTLQESKEIQEAFQNWGIHLAGYSTPGSGSERLIHESDNRTFAQVLVEAIPEIIS 737
Query: 1282 VNLSDVDLLE-----FLQQLADTDGSSTTPPS-----------------------VLRVL 1313
L D L+ FL QL + SS + P+ +L ++
Sbjct: 738 DKLLQEDELQNLVKGFLAQLQEDLPSSFSSPNPDQTQRHGEEFVWLKALRYCPKPLLNLI 797
Query: 1314 NSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQ 1371
NSKACRGAIMF DSL +C + CAHGRP+ VPLV L + + + Q
Sbjct: 798 NSKACRGAIMFNDSLSRMQCESL------------CAHGRPSLVPLVELGSPTRNLGQ 843
>gi|339640427|ref|ZP_08661871.1| DNA mismatch repair protein [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339453696|gb|EGP66311.1| DNA mismatch repair protein [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 648
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 215/471 (45%), Gaps = 63/471 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSHFTIETATES 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
+G V +G + E+ + VGT + DLF+N P R KYM+S ++ H
Sbjct: 118 GQHGTLLVAQGGEI-------EKHEPASSPVGTKIKVEDLFFNTPARLKYMKSQQAELSH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
V + R++L HP+V+F I EL T S + + +G+ + E++A+
Sbjct: 171 IV-DVINRLSLAHPEVAFTLIS--DGRELTRTAGSGNLRQAIAGIYGLATAKKMVEISAS 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
D E+SGY+S P + + + + + IN RY+ ++ N
Sbjct: 228 DLDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAI 268
Query: 295 LKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
L G SK P ++N++ L D+ P K V ++ I +AI ++ +
Sbjct: 269 LDGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMTLISQAIATSLKE 328
Query: 353 KIAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--E 406
+ D++ DA L S + Q+S L + L +Q D + +
Sbjct: 329 Q--------DLIPDALENLAKSTVKRANKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQ 380
Query: 407 RITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+++F+E + E +E E P S+S+ FAE P ++DH
Sbjct: 381 QLSFEESAESVHEATDEKAE------PPQSTSV---KFAERKPASYDQLDH 422
>gi|291536170|emb|CBL09282.1| DNA mismatch repair protein MutL [Roseburia intestinalis M50/1]
gi|291538967|emb|CBL12078.1| DNA mismatch repair protein MutL [Roseburia intestinalis XB6B4]
Length = 686
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 178/358 (49%), Gaps = 34/358 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ + VV+ELV N++DA AT V V + ++++ D+
Sbjct: 1 MPEITLLSQETIDKIAAGEVVERPSSVVKELVENAIDAKATAVTVEIKEGGISFIRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI R + L RH+TSK+ + D+ I + GFRGEAL+SI+ VS +E+ITK +G
Sbjct: 61 GCGIERAQVPLAFLRHSTSKIKSVEDL---MSITSLGFRGEALSSIAAVSQVELITKTYG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
G R V++GSK + E +++ GTT + R+LFYN P RRK+++++ + +
Sbjct: 118 ELTGTRYVIEGSK------EKENEEIGAPEGTTFIVRNLFYNTPARRKFLKTAQTEG-NY 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
+ + R+AL HP VSFKFI+ + + T +S ++ +G + S L E++ +
Sbjct: 171 INDLMERLALSHPGVSFKFIN--NGQTKMHTSGNSREKDMIYHIYGRDITSGLLEIDHKN 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
+ G+I P S + F+ +IN RY+ + K + +A GFL
Sbjct: 229 EYFHVKGFIGKPLISRGNRNFENYFINGRYIKSALLSKSIE------------EAYKGFL 276
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +L L D+ P K + F + E + + IR A K
Sbjct: 277 -----MQHQYPFCVLYFSMDTDLLDVNVHPTKMELRFSNNEAIYKTLFEIIRGALTHK 329
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERI----RLEELRHKVLSGEGKS 1213
+ K + K++ Q+ + V L +IDQHAA E++ ++++R K S + S
Sbjct: 490 LTKDAKKKHKIIGQLFDTYWMVEYEDKLFIIDQHAAHEKVLYEKTMKKVREKTFSSQTLS 549
Query: 1214 VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITL 1273
+ L + EI ++L+ + EQI +G+ I G + + +
Sbjct: 550 PPIILT---LSIEEI--EMLEKYREQIDAFGY--EIEPFGGKEY--------------AV 588
Query: 1274 LAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSEC 1333
A+P F + LE L A+ + + +P +++ + S +C+ AI + E
Sbjct: 589 TAIPADFTGIDTKTMFLEMLDDFANIN-ENDSPNAIMEKVASMSCKAAIKGNQHISRPEA 647
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
+++EL + + C HGRPT + + E
Sbjct: 648 ERLIDELLELENPYNCPHGRPTIISMTKYE 677
>gi|392429490|ref|YP_006470504.1| DNA mismatch repair protein HexB [Streptococcus intermedius JTH08]
gi|419776902|ref|ZP_14302821.1| DNA mismatch repair protein, C-terminal domain / MutL C-terminal
dimerization domain multi-domain protein [Streptococcus
intermedius SK54]
gi|383845587|gb|EID82990.1| DNA mismatch repair protein, C-terminal domain / MutL C-terminal
dimerization domain multi-domain protein [Streptococcus
intermedius SK54]
gi|391758639|dbj|BAM24256.1| DNA mismatch repair protein HexB [Streptococcus intermedius JTH08]
Length = 648
Score = 146 bits (369), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 189/404 (46%), Gaps = 44/404 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 1 MSKIIELPEKLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLKSIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEAL SI+ VS L I T
Sbjct: 61 GEGIEHEEVPLALRRHATSKIKKQADL---FRIRTLGFRGEALPSIASVSCLTIETATET 117
Query: 120 RPNGYRKVMKGS--KCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G V +G +C ++ VGT + +LF+N P R KYM+S ++ H V
Sbjct: 118 DQYGTLLVARGGEIEC----VEPTSSTVGTKIKVENLFFNTPARLKYMKSQQAELSHIV- 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R++L HP+++F I+ ++ T + + + +G+ + E++A++
Sbjct: 173 DVMNRLSLAHPEIAFTLIN--DGKKMTQTVGTGNLRQAIAGVYGLTTAKKMIEISASNLD 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
E+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 231 FEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDG 271
Query: 298 KRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW----- 350
SK P ++ ++ L D+ P K V ++ I +AI ++
Sbjct: 272 YGSKLMVGRFPIAVIAIQIDPYLADVNVHPTKQEVRISKERELMVLISQAIAASLKEYDL 331
Query: 351 ----MKKIAHDSFD-VDMLEDAELPLESSRFQSHQSSTHLHSSP 389
++ +A + + V M E LPL+ +R Q T P
Sbjct: 332 IPDALENLAKSTINRVSMPEQTSLPLKENRLYYDQGRTDFFVKP 375
>gi|58336746|ref|YP_193331.1| DNA mismatch repair protein [Lactobacillus acidophilus NCFM]
gi|227903307|ref|ZP_04021112.1| DNA mismatch repair protein [Lactobacillus acidophilus ATCC 4796]
gi|81311521|sp|Q5FLX4.1|MUTL_LACAC RecName: Full=DNA mismatch repair protein MutL
gi|58254063|gb|AAV42300.1| DNA mismatch repair protein [Lactobacillus acidophilus NCFM]
gi|227868936|gb|EEJ76357.1| DNA mismatch repair protein [Lactobacillus acidophilus ATCC 4796]
Length = 631
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 205/440 (46%), Gaps = 46/440 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MPKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI+RD + L RHATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRHATSKISNEHDL---FKVATLGFRGEALASISAVSHVEILTAT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G G+K G +D GT + RDLF+N P R KY++ SP+ + +
Sbjct: 116 KGAIGVKATFSGGNKK---GQEDAAAREGTQITVRDLFFNTPARLKYLR-SPRTEIMKIV 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R+AL +P VSF + + LL T + + + + +G ++E A D
Sbjct: 172 DIINRLALGYPSVSFTLSN--TGKVLLRTPGNGNLKQTVANVYGRHIAEKMEEFEAKDND 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ISG +S P + S + F + +N RY+ +++ N + G
Sbjct: 230 FKISGLMSKPELTRSTRNFVSILLNGRYIR-------------------NFQLNTAIMDG 270
Query: 298 KRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
+K A P +L ++ L D+ P K V + + I I + ++KK
Sbjct: 271 YGAKLAARHYPIIVLAIQVDPLLVDVNVHPTKQEVRLSKEKELSRLITSTISNVFIKKTE 330
Query: 356 HDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQK 415
S ++ E ++ +F +Q+ N A+++ H+ E+ EF
Sbjct: 331 QTSAFANLENKRETLVDQLQFNLNQNVV--------NTARKKTPEIHENNEK---PEFLA 379
Query: 416 DPVELAEENTEMEFFSQPKH 435
P + EE T+ + P+
Sbjct: 380 KPKKPEEEKTDYVDLNIPRE 399
>gi|306826020|ref|ZP_07459356.1| DNA mismatch repair protein HexB [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304431736|gb|EFM34716.1| DNA mismatch repair protein HexB [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 649
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 211/465 (45%), Gaps = 50/465 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAMDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++ + AI K +
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMKLVSEAI----AKSLKEQ 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITF---QEFQ 414
+ D LE+ L + R T L PLK ++M + E IT E
Sbjct: 330 TLIPDALEN--LAKSTLRNCEKVEQTTL---PLK------ENMLYYEQPAITSPTQAEVA 378
Query: 415 KDPVELAEENTEMEFFSQP--KHSSSLLDGSFAECLPIVPPKIDH 457
VEL EE ++ F++ + + FAE P+ ++DH
Sbjct: 379 DHQVELTEEGQDLTLFAKETLEQLTKPAKLHFAERKPVSYDQLDH 423
>gi|240146293|ref|ZP_04744894.1| DNA mismatch repair protein MutL [Roseburia intestinalis L1-82]
gi|257201597|gb|EEU99881.1| DNA mismatch repair protein MutL [Roseburia intestinalis L1-82]
Length = 686
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 178/358 (49%), Gaps = 34/358 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ + VV+ELV N++DA AT V V + ++++ D+
Sbjct: 1 MPEITLLSQETIDKIAAGEVVERPSSVVKELVENAIDAKATAVTVEIKEGGISFIRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI R + L RH+TSK+ + D+ I + GFRGEAL+SI+ VS +E+ITK +G
Sbjct: 61 GCGIERAQVPLAFLRHSTSKIKSVEDL---MSITSLGFRGEALSSIAAVSQVELITKTYG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
G R V++GSK + E +++ GTT + R+LFYN P RRK+++++ + +
Sbjct: 118 ELTGTRYVIEGSK------EKENEEIGAPEGTTFIVRNLFYNTPARRKFLKTAQTEG-NY 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
+ + R+AL HP VSFKFI+ + + T +S ++ +G + S L E++ +
Sbjct: 171 INDLMERLALSHPGVSFKFIN--NGQTKMHTSGNSREKDMIYHIYGRDITSGLLEIDHKN 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
+ G+I P S + F+ +IN RY+ + K + +A GFL
Sbjct: 229 EYFHVKGFIGKPLISRGNRNFENYFINGRYIKSALLSKSIE------------EAYKGFL 276
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +L L D+ P K + F + E + + IR A K
Sbjct: 277 -----MQHQYPFCVLYFSMDTDLLDVNVHPTKMELRFSNNEAIYKTLFEIIRGALTHK 329
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERI----RLEELRHKVLSGEGKS 1213
+ K + K++ Q+ + V L +IDQHAA E++ ++++R K S + S
Sbjct: 490 LTKDAKKKHKIIGQLFDTYWMVEYEDKLFIIDQHAAHEKVLYEKTMKKVREKTFSSQTLS 549
Query: 1214 VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITL 1273
+ L + EI ++L+ + EQI +G+ I G + + +
Sbjct: 550 PPIILT---LSIEEI--EMLEKYREQIDAFGY--EIEPFGGKEY--------------AV 588
Query: 1274 LAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSEC 1333
A+P F + LE L A+ + + +P +++ + S +C+ AI + E
Sbjct: 589 TAIPADFTGIDTKTMFLEMLDDFANIN-ENDSPNAIMEKVASMSCKAAIKGNQHISRPEA 647
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
+++EL + + C HGRPT + + E
Sbjct: 648 ERLIDELLELENPYNCPHGRPTIISMTKYE 677
>gi|347522501|ref|YP_004780072.1| DNA mismatch repair protein MutL [Lactococcus garvieae ATCC 49156]
gi|385833885|ref|YP_005871660.1| DNA mismatch repair protein MutL [Lactococcus garvieae Lg2]
gi|343181069|dbj|BAK59408.1| DNA mismatch repair protein MutL [Lactococcus garvieae ATCC 49156]
gi|343183038|dbj|BAK61376.1| DNA mismatch repair protein MutL [Lactococcus garvieae Lg2]
Length = 629
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 176/356 (49%), Gaps = 30/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E++ N + +G V+ VV+ELV NS+DAGAT++ V + ++V+D+
Sbjct: 1 MGKIIELDESLANQIAAGEVVERPASVVKELVENSIDAGATRIIVKIQESGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G+GI ++ + +RHATSK+ + AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GTGIEKEDVAKSLKRHATSKIKNKADL---FKIRTLGFRGEAMPSIASVSEFSIETSVTD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G R V G K L +R+ GT V ++LFYN P R KY++S ++ H +
Sbjct: 118 EESGTRLVSHGGKVDTLEAIAQRE--GTKVTVQNLFYNTPARLKYIRSLQAELSH-ITDV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R ++ HP++SF I+ EL+ T + ++ S +G+ + +V A D
Sbjct: 175 INRQSMAHPEISFTLIN--EGRELMKTAGNGDLRQVIASVYGLPTAKKMLKVEAEDLDFT 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
ISGY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 233 ISGYVSLPELTRANRNYITLMINGRFI-------------------KNFLLNRAILEGYG 273
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
R P +L++ L D+ P K V ++ I AI+S ++++
Sbjct: 274 NRLMVGRFPIVVLSIEIDPQLADVNVHPTKQEVRLSKERELMRLITEAIQSVFVEQ 329
>gi|270291963|ref|ZP_06198178.1| DNA mismatch repair protein HexB [Streptococcus sp. M143]
gi|270279491|gb|EFA25333.1| DNA mismatch repair protein HexB [Streptococcus sp. M143]
Length = 649
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 173/356 (48%), Gaps = 30/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAISNSLREQ 329
>gi|418965199|ref|ZP_13516981.1| DNA mismatch repair protein [Streptococcus constellatus subsp.
constellatus SK53]
gi|383343314|gb|EID21502.1| DNA mismatch repair protein [Streptococcus constellatus subsp.
constellatus SK53]
Length = 648
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 209/456 (45%), Gaps = 50/456 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 1 MSKIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLKSIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEAL SI+ VS L I T +G
Sbjct: 61 GEGIEHEEVSLALRRHATSKIKKQADL---FRIRTLGFRGEALPSIASVSRLTIETATNG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G R + +G + ++ GT + DLF+N P R KYM+S ++ H V
Sbjct: 118 GTHGTRLIAQGGEI--ETVEPSSCPKGTKIKVEDLFFNTPARLKYMKSQQAELSHIV-DM 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+V+ FI + EL T + + + +G+ + E++A++ E
Sbjct: 175 INRLSLAHPEVA--FILLNDGKELTRTAGTGNLRQAIAGIYGLTTAKKMIEISASNLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 233 VSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++ ++ L D+ P K V ++ I +AI ++ ++
Sbjct: 274 SKLMVGRFPIAVIAIQIDPYLADVNVHPTKQEVRISKERELMVLISQAIAASLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRF----QSHQSSTHLHSSPLKNLAKQRDHMFHKEC-------- 405
D++ DA L S +S Q+S L + L ++ D +
Sbjct: 330 ----DLIPDALENLAKSTINRANKSEQTSLPLKENRLYYDKERNDFFVRPQVSESNLPFE 385
Query: 406 ERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLD 441
E TF + D LA ++F ++ S LD
Sbjct: 386 ENATFDQQHTDTDMLASRAVSVKFAARQTPSYDQLD 421
>gi|422881008|ref|ZP_16927464.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK355]
gi|332365450|gb|EGJ43211.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK355]
Length = 649
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 215/469 (45%), Gaps = 59/469 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 2 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKTIQVTDN 61
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 62 GEGIDHQDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 118
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G R V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 119 GQHGTRLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 173
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 174 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 230
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 231 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 271
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 272 GYGSKLMVGRFPLAIINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIVTSLKEQ- 330
Query: 355 AHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S + Q + L + L +Q D + +++
Sbjct: 331 -------DLIPDALENLAKSTVKRVTKPEQITLPLKENRLYYDKEQNDFFLKPQVAEQQL 383
Query: 409 TFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+F+E + E +E E+ P+ +S FAE P ++DH
Sbjct: 384 SFEESAEPGHEATDEKAEL-----PQSTSV----KFAERKPASYDQLDH 423
>gi|335032067|ref|ZP_08525476.1| DNA mismatch repair protein MutL [Streptococcus anginosus SK52 =
DSM 20563]
gi|333767933|gb|EGL45148.1| DNA mismatch repair protein MutL [Streptococcus anginosus SK52 =
DSM 20563]
Length = 648
Score = 146 bits (369), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 172/353 (48%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 1 MSKIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLRSIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEAL SI+ VS L I T
Sbjct: 61 GEGIEHEEVSLALRRHATSKIKKQADL---FRIRTLGFRGEALPSIASVSRLTIETATSS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + +G + L + GT + DLF+N P R KYM+S ++ H V
Sbjct: 118 GAHGTLLIAQGGEVETL--EPSSCPRGTKIKVEDLFFNTPARLKYMKSQQAELSHIV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+V+F ++ E+ T + + + +G+ + E++A+D E
Sbjct: 175 MNRLSLAHPEVAFTLVN--DGKEMTRTAGTGNLRQAIAGIYGLTTAKKMIEISASDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 233 VSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SK P ++++R L D+ P K V ++A I +AI ++
Sbjct: 274 SKLMVGRFPIAVIDIRIDPYLADVNVHPTKQEVRISKERELMALISQAIAASL 326
>gi|220917323|ref|YP_002492627.1| DNA mismatch repair protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|254766155|sp|B8J9F5.1|MUTL_ANAD2 RecName: Full=DNA mismatch repair protein MutL
gi|219955177|gb|ACL65561.1| DNA mismatch repair protein MutL [Anaeromyxobacter dehalogenans
2CP-1]
Length = 607
Score = 146 bits (369), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 173/361 (47%), Gaps = 37/361 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I+ LP + N + +G V+ +V+ELV N++DAGAT V V V V+V DD
Sbjct: 1 MPRIHVLPPGLVNQIAAGEVVERPASIVKELVENALDAGATSVGVDVEEGGLALVRVADD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSG+ RD +L ERHATSK L D + IGT GFRGEA+ +I+ VS + T A
Sbjct: 61 GSGMDRDDALLALERHATSK---LRDAEGLAAIGTMGFRGEAVPAIASVSRFRLDTSAGE 117
Query: 120 RPNGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R ++G LG + + GTTV RDLF+N P RRK+M+++ + H V +
Sbjct: 118 DGAGTRVEIEGG---VLGEVAPVARPRGTTVEVRDLFFNTPARRKFMRAASTEAGH-VSE 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDGA 237
V+R+AL P V F + S L+ + LA + G E L V+A G
Sbjct: 174 AVIRLALARPDVGFT---LRSAGRLVLGARAGGGLADRAGQALGREAHRHLLPVDARRGE 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVC-KGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ + G I SP S + Y+++N RYV + H +L A +
Sbjct: 231 VRVHGLICSPDHSEATGRALYLFVNGRYVRDRAAAHAVLRAFAGTLPPGRH--------- 281
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-WM 351
PA +L + P D+ P K V F + ++ + + A+R+A W+
Sbjct: 282 ---------PAGVLFVELPLHRVDVNVHPQKLEVRFAEGREVFDALFHTVAGALRTAPWL 332
Query: 352 K 352
+
Sbjct: 333 R 333
>gi|420143116|ref|ZP_14650619.1| DNA mismatch repair protein mutL [Lactococcus garvieae IPLA 31405]
gi|391856921|gb|EIT67455.1| DNA mismatch repair protein mutL [Lactococcus garvieae IPLA 31405]
Length = 629
Score = 146 bits (369), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 176/356 (49%), Gaps = 30/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E++ N + +G V+ VV+ELV NS+DAGAT++ V + ++V+D+
Sbjct: 1 MGKIIELDESLANQIAAGEVVERPASVVKELVENSIDAGATRIIVKIQESGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G+GI ++ + +RHATSK+ + AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GTGIEKEDVAKSLKRHATSKIKNKADL---FKIRTLGFRGEAMPSIASVSEFSIETSVTD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G R V G K L +R+ GT V ++LFYN P R KY++S ++ H +
Sbjct: 118 EESGTRLVSHGGKVDTLEAIAQRE--GTKVTVQNLFYNTPARLKYIRSLQAELSH-ITDV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R ++ HP++SF I+ EL+ T + ++ S +G+ + +V A D
Sbjct: 175 INRQSMAHPEISFTLIN--EGRELMKTAGNGDLRQVIASVYGLPTAKKMLKVEAEDLDFT 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
ISGY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 233 ISGYVSLPELTRANRNYITLMINGRFI-------------------KNFLLNRAILEGYG 273
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
R P +L++ L D+ P K V ++ I AI+S ++++
Sbjct: 274 NRLMVGRFPIVVLSIEIDPQLADVNVHPTKQEVRLSKERELMRLITEAIQSVFVEQ 329
>gi|406586637|ref|ZP_11061564.1| DNA mismatch repair protein [Streptococcus sp. GMD1S]
gi|419813735|ref|ZP_14338547.1| DNA mismatch repair protein [Streptococcus sp. GMD2S]
gi|419817179|ref|ZP_14341347.1| DNA mismatch repair protein [Streptococcus sp. GMD4S]
gi|404466309|gb|EKA11653.1| DNA mismatch repair protein [Streptococcus sp. GMD4S]
gi|404472668|gb|EKA17085.1| DNA mismatch repair protein [Streptococcus sp. GMD2S]
gi|404473889|gb|EKA18213.1| DNA mismatch repair protein [Streptococcus sp. GMD1S]
Length = 649
Score = 146 bits (369), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 200/435 (45%), Gaps = 42/435 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSQIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V + DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCAEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+ D LE+ +R + Q+ L + L + E R T E
Sbjct: 330 ALIPDALENLAKSTVRNRQKVEQTILPLKENTL--------YYEQTEVTRPTQVEVSDHQ 381
Query: 418 VELAEENTEMEFFSQ 432
V L EE ++ F++
Sbjct: 382 VGLTEERQDLTLFAK 396
>gi|390444465|ref|ZP_10232242.1| DNA mismatch repair protein mutL [Nitritalea halalkaliphila LW7]
gi|389664472|gb|EIM75964.1| DNA mismatch repair protein mutL [Nitritalea halalkaliphila LW7]
Length = 601
Score = 146 bits (369), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 179/365 (49%), Gaps = 35/365 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+A+ N + +G V+ ++EL+ N+VDAGAT + V + ++V+D+G G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASALKELLENAVDAGATHIQVLIKEAGKQLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ +D I TFGFRGEALASI+ V+ +E+ TK
Sbjct: 65 MSGTDARMSFERHATSKI---RASEDLFAIKTFGFRGEALASIAAVAQVEMKTKRAADEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R +++GS+ E+K GT + ++LF+N P RR +++S+ ++ H V++
Sbjct: 122 GTRLLIEGSEV------KEQKPAALPDGTAIAVKNLFFNVPARRNFLKSNAVEMRHLVEE 175
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
R+AL HP++ + + +D L +SS +++ G + S L L
Sbjct: 176 FQ-RVALAHPEIK---MSLHQQDMELYQLPASSLQQRIVALMGKQYRSQLIAAQEESPFL 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
ISG++ P + K QY+++N RY+ +H + C+ A G +
Sbjct: 232 TISGFVGKPELARKTKGEQYLFVNHRYIRSPYLHHAV--------CT----AYEGLI--- 276
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
S P Y+L L D+ P KT + F D + ++ A+R A + +
Sbjct: 277 --ASDLHPFYVLFLEIDPKHIDINVHPTKTEIKFDDERTIYGVVKTALRQALGGHLVVPT 334
Query: 359 FDVDM 363
D D+
Sbjct: 335 IDFDL 339
>gi|414075210|ref|YP_007000427.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris UC509.9]
gi|413975130|gb|AFW92594.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp.
cremoris UC509.9]
Length = 656
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 226/493 (45%), Gaps = 56/493 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV NS+DAG++K+ V V ++V D+
Sbjct: 1 MGKIIELNEGLANQIAAGEVVERPASVVKELVENSIDAGSSKITVSVEEAGLRLIEVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ ++ + L RHATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRHATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSNAQ 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + + KG L + K +GT + +LFYN P R KY++S ++ H +
Sbjct: 118 EEAGTKLIAKGGTIETL--EPLAKRLGTKISVANLFYNTPARLKYIKSLQAELSH-ITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP++SF ++ E L T + ++ + +GI + E+N +D E
Sbjct: 175 INRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMREINGSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
++GY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 233 LTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGYG 273
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
R P +L+++ L D+ P K V ++ I +AI A ++
Sbjct: 274 NRLMVGRFPFAVLSIKIDPKLADVNVHPTKQEVRLSKERELMTLISKAIDEA----LSEG 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+ LE+ + ++ S Q+ L ++PL ++D +E F+ + D
Sbjct: 330 VLIPEALENLQGRVKEKETVSVQTELPLQNNPLYYDNVRQDFFVREEA---IFEINKNDN 386
Query: 418 VE-LAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDHRVWTIESS-WFQDHQPSRH 475
+ L E+N+ +QP+ S V KI R T+ESS F D P
Sbjct: 387 SDSLTEQNSTDYTVNQPETGS-------------VSEKITDR--TVESSNEFTDRTPKNS 431
Query: 476 L--FSPPLENLKK 486
+ F +N++K
Sbjct: 432 VSNFGVDFDNIEK 444
>gi|125625245|ref|YP_001033728.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|389855633|ref|YP_006357877.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris
NZ9000]
gi|166232095|sp|A2RP08.1|MUTL_LACLM RecName: Full=DNA mismatch repair protein MutL
gi|124494053|emb|CAL99053.1| DNA mismatch repair protein mutL [Lactococcus lactis subsp.
cremoris MG1363]
gi|300072055|gb|ADJ61455.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 656
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 227/493 (46%), Gaps = 56/493 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ ++ + L RHATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRHATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSNAQ 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + + KG L + K +GT + +LFYN P R KY++S ++ H +
Sbjct: 118 EEAGTKLIAKGGTIETL--EPLAKRLGTKISVANLFYNTPARLKYIKSLQAELSH-ITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP++SF ++ E L T + ++ + +GI + E+N +D E
Sbjct: 175 INRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMREINGSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
++GY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 233 LTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGYG 273
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
R P +L+++ L D+ P K V ++ I +AI + ++
Sbjct: 274 NRLMVGRFPFAVLSIKIDPKLADVNVHPTKQEVRLSKERELMTLISKAID----ETLSEG 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+ LE+ + + S Q+ L ++PL ++D +E F+ + D
Sbjct: 330 VLIPEALENLQGRAKEKGTVSVQTELPLQNNPLYYDNVRQDFFVREEA---IFEINKNDN 386
Query: 418 VE-LAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDHRVWTIESS-WFQDHQPSRH 475
+ L E+N+ +QP+ S V KI R T+ESS F D P
Sbjct: 387 SDSLTEQNSTDYTVNQPETGS-------------VSEKITDR--TVESSNEFTDRTPKNS 431
Query: 476 L--FSPPLENLKK 486
+ F +N++K
Sbjct: 432 VSNFGVDFDNIEK 444
>gi|421489398|ref|ZP_15936780.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK304]
gi|400366030|gb|EJP19072.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK304]
Length = 649
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSRPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL EE ++ F++
Sbjct: 380 HQVELTEEGRDLTLFAK 396
>gi|423069765|ref|ZP_17058550.1| DNA mismatch repair protein mutL [Streptococcus intermedius F0395]
gi|355363639|gb|EHG11375.1| DNA mismatch repair protein mutL [Streptococcus intermedius F0395]
Length = 648
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 208/456 (45%), Gaps = 50/456 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAG T++ V + ++V+D+
Sbjct: 1 MSKIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGTTQIIVEIEEAGLKSIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI D + L RHATSK+ AD+ I T GFRGEAL SI+ VS L I T +G
Sbjct: 61 GEGIEHDEVSLALRRHATSKIKKQADL---FRIRTLGFRGEALPSIASVSRLTIETATNG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G R + +G + ++ GT + DLF+N P R KYM+S ++ H V
Sbjct: 118 GTHGTRLIAQGGEI--ETVEPSSCPKGTKIKVEDLFFNTPARLKYMKSQQAELSHIV-DM 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+V+ FI + EL T + + + +G+ + E++A++ E
Sbjct: 175 INRLSLAHPEVA--FILLNDGKELTRTAGTGNLRQAIAGIYGLTTAKKMIEISASNLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 233 VSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++ ++ L D+ P K V ++ I +AI ++ ++
Sbjct: 274 SKLMVGRFPIAVIAIQIDPYLADVNVHPTKQEVRISKERELMVLISQAIAASLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRF----QSHQSSTHLHSSPLKNLAKQRDHMFHKEC-------- 405
D++ DA L S +S Q+S L + L ++ D +
Sbjct: 330 ----DLIPDALENLAKSTINRANKSEQTSLPLKENRLYYDKERNDFFVRPQVSESNLSFE 385
Query: 406 ERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLD 441
E TF + D LA ++F ++ S LD
Sbjct: 386 ENATFDQQHTDTDMLASRAVSVKFAARQTPSYDQLD 421
>gi|346226362|ref|ZP_08847504.1| DNA mismatch repair protein mutL [Anaerophaga thermohalophila DSM
12881]
Length = 623
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 184/376 (48%), Gaps = 35/376 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ VV+ELV N+VDAG++++ + V ++++D+G G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAVDAGSSEIQIIVKDAGRTLIQIIDNGCG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + +D I T GFRGEALASI+ V+ +E+ T+ H +
Sbjct: 65 MSETDARMAFERHATSKI---RNANDLFAIRTMGFRGEALASIAAVAHVELKTRLHEQQL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R + GSK + ++ V G+ + ++LF+N P RR++++++ ++ H V +
Sbjct: 122 GTRIEIAGSKV------ENQEPVTCAPGSNFMVKNLFFNVPARRRFLKTNATELRHIVNE 175
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIAL +P + F +E ++ L SS+ + + G + L V A+ +
Sbjct: 176 -FQRIALANPSIMF---SLEHNNQKLFILPSSNLRQRISALLGSHTNALLLPVEADTSVI 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+I G+I P + QY ++N+RY+ +HK A + A +
Sbjct: 232 KIHGFIGKPQSARKTPGDQYFFVNNRYMRSPYLHK-----AVMVAYENLVPAGH------ 280
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
CP Y L + D+ P KT + F+D V + A+R A K S
Sbjct: 281 ------CPPYFLFFEADPGIIDVNIHPTKTEIKFEDERSVWKIVSAAVREALGKFNMVPS 334
Query: 359 FDVDMLEDAELPLESS 374
D + ++P + S
Sbjct: 335 IDFGDAGEVQIPAKKS 350
>gi|307711077|ref|ZP_07647499.1| DNA mismatch repair protein mutL [Streptococcus mitis SK321]
gi|307617039|gb|EFN96217.1| DNA mismatch repair protein mutL [Streptococcus mitis SK321]
Length = 649
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 204/437 (46%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAMDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I GT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEIIPATSPAGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++A + AI K +
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIS----KSLKEQ 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|228476690|ref|ZP_04061359.1| DNA mismatch repair protein MutL [Streptococcus salivarius SK126]
gi|228251639|gb|EEK10736.1| DNA mismatch repair protein MutL [Streptococcus salivarius SK126]
Length = 647
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 178/353 (50%), Gaps = 38/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A G
Sbjct: 61 GEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISYLTIVTAAAG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + V KG K E +D VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 EAYGTKLVAKGGKI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFTLLN---DGRQLTQISGTGDLRQAIAGIYGLTTAKKMVEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD G
Sbjct: 227 SDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD---------G 271
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
+ G + P +++++ L D+ P K V + ++A I AI
Sbjct: 272 Y--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|116626082|ref|YP_828238.1| DNA mismatch repair protein MutL [Candidatus Solibacter usitatus
Ellin6076]
gi|122251851|sp|Q01QW7.1|MUTL_SOLUE RecName: Full=DNA mismatch repair protein MutL
gi|116229244|gb|ABJ87953.1| DNA mismatch repair protein MutL [Candidatus Solibacter usitatus
Ellin6076]
Length = 660
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 176/389 (45%), Gaps = 55/389 (14%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I LP+ V N + +G V+ VV+EL+ NS+DAGAT+V V V +++VDD
Sbjct: 1 MGRIRILPDQVANKIAAGEVVERPASVVKELLENSLDAGATEVRVEVEAGGRRLIRIVDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ RD +L ERHATSKL D+ D I T GFRGEAL SI+ VS L + T++
Sbjct: 61 GFGMLRDDALLAFERHATSKL---RDVKDLLSIATLGFRGEALPSIASVSRLLLETRSME 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G R + G K L ++ GT + RDLFYN P RRK++++ P ++ H +
Sbjct: 118 EPTGTRIEIAGGKMLR--CEEAALGGGTVITVRDLFYNVPARRKFLRTEPTELAH-IASL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL- 238
V +L HP SF+ ELL +S + FG + L E+ + L
Sbjct: 175 VTHYSLAHPDKSFRL--STGPTELLGVTPVASMKERVYQVFGSQILDELVEIGVRERDLF 232
Query: 239 ----------------------------EISGYISSPYDSISVKAFQYVYINSRYVCKGP 270
++G+ S P S + Y+++N R +
Sbjct: 233 LPPPSVPPSQAIAEYRSTEPEDPPFRRFRLTGFFSRPQIQKSNRNSIYIFVNGRLIRD-- 290
Query: 271 IHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHV 330
+L+ H +S A + + + A P LL L C D+ P KT V
Sbjct: 291 --RLVLHALSS--------AYHNLM-----PASAYPFALLFLECDAEEVDVNVHPSKTEV 335
Query: 331 VFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
F+ + FI +IR M+ +F
Sbjct: 336 RFRHGSFLHDFIRDSIRERLMESRPAPTF 364
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 1146 LHLTGEF---FIP-DSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE 1201
L + GEF IP ++ S L D + L Q+ + FI L +IDQH A ERI E+
Sbjct: 448 LDMHGEFPLEAIPAPEMSLSALSDLRPLGQIHESFIIAAGRDGLWIIDQHVAHERILFEQ 507
Query: 1202 LRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICN-IHTQG--SRSFN 1258
+ + +G ++ Q L++P I LQ AEQ D+ I + +H G + F
Sbjct: 508 VLKQRAAGRVET-------QRLLMPMI----LQLSAEQQIDYARIADELHASGFETEPFG 556
Query: 1259 KNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR-VLNSKA 1317
I + A P G + L E L ++A+ + + + + R + S A
Sbjct: 557 NR---------TIAVKAAPAAVGPQDLERILFEIL-EIAENEMRTNSLDDLRRNICASIA 606
Query: 1318 CRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1357
CR AI L ++ ++ L T C HGRP +
Sbjct: 607 CRAAIKINMRLDLAKMEWLLRALAATDCPMSCPHGRPIAM 646
>gi|374674287|dbj|BAL52178.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
IO-1]
Length = 695
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 175/352 (49%), Gaps = 30/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
+G I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 40 VGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 99
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ ++ + L RHATSK+ + AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 100 GLGLEKEDVALALRRHATSKIKYSADL---FRIRTLGFRGEALPSIASVSQMTIETSTAE 156
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + + KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 157 EESGTKLIAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITDI 213
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D E
Sbjct: 214 INRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFE 271
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
++GY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 272 LTGYVSIPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGYG 312
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
R P +L+++ +L D+ P K V ++A I +AI A
Sbjct: 313 NRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAIDEA 364
>gi|418129357|ref|ZP_12766241.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA07643]
gi|353802649|gb|EHD82941.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA07643]
Length = 649
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAMDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPTRPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL EE ++ F++
Sbjct: 380 YQVELTEERQDLTLFAK 396
>gi|241152210|ref|XP_002406861.1| DNA mismatch repair protein mlh3, putative [Ixodes scapularis]
gi|215493958|gb|EEC03599.1| DNA mismatch repair protein mlh3, putative [Ixodes scapularis]
Length = 354
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 169/337 (50%), Gaps = 11/337 (3%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
+ LP V + +RSG + + +EE+V NS+DAGAT V V + + V+VVD+G G+
Sbjct: 3 LRALPADVISKLRSGVAIVSIAHCMEEVVLNSLDAGATCVAVRLNLPYHKVQVVDNGHGM 62
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVS-LLEIITKAHGRPN 122
SR+ L + GER++TSK L+D++ +G+RGEA+AS+ ++S +L+I ++A G
Sbjct: 63 SREQLSVCGERYSTSKCRTLSDLEHPK---FYGYRGEAIASLVEMSGMLQIESRAAGSDE 119
Query: 123 GYRKVM-KGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ +G +R VGTTV D +N PVRR + + + +
Sbjct: 120 SHCKIFTRGHMQELSSSSSKRPSVGTTVTVLDFMFNLPVRRSSVSETID--FEFCLQLLE 177
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
+AL HP+VSF D S + S S L FG + + L N I
Sbjct: 178 GLALSHPEVSFSLRDDISGEIRFQAHKSESVLETFSQLFGKQKAASLKHATLNKKKFAIQ 237
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
Y+S + + + Q+ Y+N R + K IHKL +++ + ++ G
Sbjct: 238 AYLS--MEGHTTRCLQFAYLNKRLLLKTRIHKLFHNVLKKYVL--KYQTLPGLPTSPTKL 293
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV 338
P +++ ++C YD+TF+P KT V F +W+ V
Sbjct: 294 RNKHPIFVVFVKCLTKTYDITFEPRKTLVEFANWDTV 330
>gi|154250378|ref|YP_001411203.1| DNA mismatch repair protein MutL [Fervidobacterium nodosum Rt17-B1]
gi|226723039|sp|A7HNR3.1|MUTL_FERNB RecName: Full=DNA mismatch repair protein MutL
gi|154154314|gb|ABS61546.1| DNA mismatch repair protein MutL [Fervidobacterium nodosum Rt17-B1]
Length = 588
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 185/358 (51%), Gaps = 40/358 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I +LP+ V + + +G V+ + VV+ELV NS+DA AT + V + Y+KV D+
Sbjct: 1 MSVIKKLPQEVVSKIAAGEVVINPASVVKELVENSLDANATSIEVQIRNGGKSYIKVSDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+SRD +++ +R TSK+ L +D I ++GFRGEAL+SI++VS L IIT + G
Sbjct: 61 GIGMSRDDMLIAIDRFTTSKISAL---EDIYNIHSYGFRGEALSSIAEVSRL-IITSSDG 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
N +R + G K + I + ++ GTTV DLF+N P RRK++ SS K V +
Sbjct: 117 N-NAHRLEVIGGKI--IKITETHRERGTTVEVYDLFFNIPARRKFL-SSEKVETRMVTEI 172
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGI-----EDFSFLDEVNAN 234
V + LV P VSF F + EDE++ S S L F I ++FS ++ + +
Sbjct: 173 VEKFMLVQPSVSFVF---KIEDEIVYNASKGS----LEDRFSIIFPEVKEFSLIEPLQSE 225
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
++ISG ISSP + ++ Q ++N R+V I LLN SF+ G+
Sbjct: 226 --IMQISGIISSPQYTRRNRSGQIFFVNKRFV----IDNLLN---LSFE--------RGY 268
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
G+ P ++ L D+ P K V F D + V I R IR+ K
Sbjct: 269 --GEALAQGEHPYGVIFLDFLPDKIDVNIHPQKLQVKFSDPQNVYNEIARTIRTTLRK 324
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L +ID HAA ERI E+L+ + ++V L + L + QL Q ++ K +G
Sbjct: 423 LVIIDFHAAHERIIYEQLKE----NKFETVQLL-IPLHIKLGKSFLQLSQQLTDEFKKYG 477
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV-NLSDVDLLEFLQQLADTDGSS 1303
+ I T L+ + + +P I V + S+V FL+ L +
Sbjct: 478 FDFEIKT------------LEDGSGEVVIKQIPSILKVTDASNV----FLEVLEEYRIPF 521
Query: 1304 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1359
P + VL SKAC+ A+ GD L E I++E+K +L C HGRP + L
Sbjct: 522 EKPKGLTYVLASKACKSAVKTGDKLSHDEVQQIIKEIKSKNLL-TCPHGRPIMMKL 576
>gi|423071705|ref|ZP_17060478.1| DNA mismatch repair protein mutL [Streptococcus intermedius F0413]
gi|355363479|gb|EHG11216.1| DNA mismatch repair protein mutL [Streptococcus intermedius F0413]
Length = 688
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 189/404 (46%), Gaps = 44/404 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 41 MSKIIELPEKLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLKSIQVIDN 100
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEAL SI+ VS L I T
Sbjct: 101 GEGIEHEEVPLALRRHATSKIKKQADL---FRIRTLGFRGEALPSIASVSCLTIETATET 157
Query: 120 RPNGYRKVMKGS--KCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G V +G +C ++ VGT + +LF+N PVR KYM+S ++ H V
Sbjct: 158 DQYGTLLVARGGEIEC----VEPTSSTVGTKIKVENLFFNTPVRLKYMKSQQAELSHIV- 212
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R++L HP+++F I+ ++ T + + + +G+ + E++A++
Sbjct: 213 DVMNRLSLAHPEIAFTLIN--DGKKMTQTVGTGNLRQAIAGVYGLTTAKKMIEISASNLD 270
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
E+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 271 FEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDG 311
Query: 298 KRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW----- 350
SK P ++ ++ L D+ P K V ++ I +AI ++
Sbjct: 312 YGSKLMVGRFPIAVIAIQIDPYLADVNVHPTKQEVRISKERELMVLISQAIAASLKEYDL 371
Query: 351 ----MKKIAHDSFD-VDMLEDAELPLESSRFQSHQSSTHLHSSP 389
++ +A + + V E LPL+ +R Q T P
Sbjct: 372 IPDALENLAKSTINRVSKPEQTSLPLKENRLYYDQGRTDFFVKP 415
>gi|435853701|ref|YP_007315020.1| DNA mismatch repair protein MutL [Halobacteroides halobius DSM
5150]
gi|433670112|gb|AGB40927.1| DNA mismatch repair protein MutL [Halobacteroides halobius DSM
5150]
Length = 611
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 176/350 (50%), Gaps = 26/350 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
MG I L + V N + +G V+ VV+ELV NS+DAG++K+ V V ++++D+
Sbjct: 1 MGQIQILSKEVANKIAAGEVVERPASVVKELVENSIDAGSSKIEVKVKNGGKDLIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ D + L +RHATSK+ D+ + T GFRGEAL SI+ VS +E+I+K
Sbjct: 61 GVGLAEDEVKLAFQRHATSKISRANDL---FTLRTLGFRGEALPSIAAVSKVEMISKTED 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G R + G + RK GT ++ RDLF+N PVR KY++ + ++ H +
Sbjct: 118 SLSGTRLQIVGGEVKARESCGCRK--GTNIIVRDLFFNTPVRYKYLKQTSTEIGH-ISDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L +PK+SF M ++ +++ T + + L ++ + +G + + EV+ D ++
Sbjct: 175 INRLSLAYPKISFSL--MHNDRQIVETTGNGNLLDVIFNIYGRDVAKEMIEVDYQDNYMQ 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++GYIS P + S + Q ++N R++ G + K + + D +
Sbjct: 233 LTGYISKPTITRSSRRHQSYFVNDRFIKSGLMSKAVKEAYHTLLTIDRY----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P +L L+ D+ P K F V ++ + A
Sbjct: 282 ------PIVVLKLKLNPVHVDVNIHPTKLQAKFSRGNVVYELVKDGVSKA 325
>gi|227894651|ref|ZP_04012456.1| DNA mismatch repair protein [Lactobacillus ultunensis DSM 16047]
gi|227863546|gb|EEJ70967.1| DNA mismatch repair protein [Lactobacillus ultunensis DSM 16047]
Length = 636
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 183/372 (49%), Gaps = 50/372 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MPKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRIDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI+RD + L RHATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRHATSKISNEHDL---FKVATLGFRGEALASISAVSHVEILTAT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G G R G G +D GT + RDLF+N P R KY++ SP+ + +
Sbjct: 116 EG-AIGVRATFSGGNK--KGQEDAAARKGTKITVRDLFFNTPARLKYLR-SPRTEIMKIV 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSF-------GIEDFSFLDE 230
+ R+AL +P+VSF + + ++L + + L +++ G+E+FS
Sbjct: 172 DIINRLALGYPQVSFT---LSNTGKILLRTTGNGNLKQTVANVYGRHIAEGMENFS---- 224
Query: 231 VNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 290
D ++SG +S P + S + F + +N RY+ +++
Sbjct: 225 --TKDNDFKVSGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQL 263
Query: 291 NNGFLKGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
N + G SK A P +++++ L D+ P K V + + I AI +
Sbjct: 264 NTAIMDGYGSKLTARHYPIVVVSIKVDPLLVDVNVHPTKQEVRLSKEKELSRLITTAISN 323
Query: 349 AWMKKIAH-DSF 359
A ++K+ D+F
Sbjct: 324 ALVEKVEQTDAF 335
>gi|418977428|ref|ZP_13525246.1| DNA mismatch repair protein [Streptococcus mitis SK575]
gi|383349869|gb|EID27786.1| DNA mismatch repair protein [Streptococcus mitis SK575]
Length = 649
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVEG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPTRPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|419494520|ref|ZP_14034240.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47461]
gi|421302041|ref|ZP_15752706.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA17484]
gi|379596884|gb|EHZ61687.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47461]
gi|395902855|gb|EJH13787.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA17484]
Length = 649
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 207/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|110636441|ref|YP_676648.1| DNA mismatch repair protein [Cytophaga hutchinsonii ATCC 33406]
gi|122967050|sp|Q11Z58.1|MUTL_CYTH3 RecName: Full=DNA mismatch repair protein MutL
gi|110279122|gb|ABG57308.1| DNA mismatch repair protein MutL [Cytophaga hutchinsonii ATCC
33406]
Length = 610
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 181/362 (50%), Gaps = 31/362 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ + N + +G V+ VV+EL+ NSVDAG+T + + V ++V+D+G G
Sbjct: 5 IRLLPDNIANQIAAGEVVQRPASVVKELLENSVDAGSTNIQLIVKDAGKQLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ DD I TFGFRGEA+ASI+ V+ +E+ TK G
Sbjct: 65 MSDGDARLCFERHATSKI---RSADDLFAIRTFGFRGEAMASIASVAQVEMKTKLPGNEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++GS L + GT++ ++LFYN P RR +++S+ ++ H + + V R
Sbjct: 122 GTLIRIEGSAILVH--EQTAHPQGTSISVKNLFYNVPARRNFLKSNSVEMRHIMDEFV-R 178
Query: 183 IALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
+AL HP+V+F F D+E + T S + ++LL S+ + +E + + I
Sbjct: 179 VALAHPEVAFSFYHNDLELFNVPEETLSKRA-VSLLGGSYREQLIPCKEETD----FVSI 233
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SGYI P + + QY ++N+RY+ +H + H +D++
Sbjct: 234 SGYIGKPESARKTRGDQYFFVNNRYIRSNYLHHAVMHAFEELIPTDAF------------ 281
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFD 360
P YLL + + D+ P KT + F D + V A I+ ++ + S D
Sbjct: 282 -----PFYLLFIEIDPAHIDVNVHPTKTEIKFDDEKTVYAIIKACVKRSLGTHNIMPSLD 336
Query: 361 VD 362
D
Sbjct: 337 FD 338
>gi|409195556|ref|ZP_11224219.1| putative DNA mismatch repair protein [Marinilabilia salmonicolor
JCM 21150]
Length = 625
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 182/372 (48%), Gaps = 35/372 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ +++ELV N+VDAG++++ + V V+++D+G G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASIIKELVENAVDAGSSEIKIIVKDAGRTLVQIIDNGCG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + +D I T GFRGEALASI+ V+ +E+ T+ H +
Sbjct: 65 MSETDARMAFERHATSKI---REANDLFAIRTMGFRGEALASIAAVAQVELKTRPHEQEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R ++ GS+ + ++ V G+ + ++LF+N P RR++++++ ++ H V +
Sbjct: 122 GTRILISGSQV------EIQEPVTCSPGSNFMIKNLFFNVPARRRFLKTTATEMRHIVNE 175
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIAL +P V+F E +LL + L + G + + + V +
Sbjct: 176 -FQRIALANPDVAFSLTHNE---QLLFRLPAGKLLQRINDVMGKQSSAQMIPVETETSLV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+I P + Q+ ++N+R++ +HK + +
Sbjct: 232 NIYGFIGKPQIARKTMGDQFFFVNNRFMKSPYLHKAVTVAYENL---------------- 275
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
+++ CP Y L SL D+ P KT + F+D V + A+R + K S
Sbjct: 276 -VQAEHCPPYFLFFETDPSLIDVNIHPTKTEIKFEDERSVWKIVSAAVRESLGKFNMVPS 334
Query: 359 FDVDMLEDAELP 370
D D ++ +P
Sbjct: 335 IDFDQTDEISIP 346
>gi|300712236|ref|YP_003738050.1| DNA mismatch repair protein MutL [Halalkalicoccus jeotgali B3]
gi|448295930|ref|ZP_21485991.1| DNA mismatch repair protein MutL [Halalkalicoccus jeotgali B3]
gi|299125919|gb|ADJ16258.1| DNA mismatch repair protein MutL [Halalkalicoccus jeotgali B3]
gi|445582653|gb|ELY36993.1| DNA mismatch repair protein MutL [Halalkalicoccus jeotgali B3]
Length = 649
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 161/347 (46%), Gaps = 28/347 (8%)
Query: 8 PEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRD 66
PE V + + +G V+ VV+ELV NS+DAGAT + V VG ++V DDG G++
Sbjct: 13 PETV-DKIAAGEVVERPASVVKELVENSLDAGATGITVAVGSGGRDRIRVADDGVGMNEG 71
Query: 67 GLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRK 126
+ E+H TSKL +AD++ G+ T GFRGEAL +I VS L I TK G G +
Sbjct: 72 SVRKAVEQHTTSKLRDVADLE--RGVSTLGFRGEALYTIGAVSRLAITTKPRGSETGTKL 129
Query: 127 VMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALV 186
V+ G + ++ GT V DLFYN P R+KY++ + H V V R AL
Sbjct: 130 VLAGGEVES--VEPAGCPEGTAVEVTDLFYNTPARKKYLKREATEFDH-VNTVVTRYALA 186
Query: 187 HPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA-NDGALE-ISGYI 244
+P V F E+ T A ++S +G E + + G LE +SGY+
Sbjct: 187 NPGVRFAL--EHDGREVFSTTGQGDLQATVLSVYGREVARAMVPIEGLAAGPLEGLSGYV 244
Query: 245 SSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQA 304
S P + S A+ Y+N RYV PI + + D +
Sbjct: 245 SDPETTRSSPAYVSTYVNGRYVRSKPIRSAVVGAYGTQLAPDRY---------------- 288
Query: 305 CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
P +L+L D+ P K V F D E + A IE+ +R +
Sbjct: 289 -PFAVLDLDVSPGTVDVNVHPRKMEVRFGDGEAIEAQIEKTVRETLL 334
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 83/207 (40%), Gaps = 21/207 (10%)
Query: 1152 FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEG 1211
F PD N L D +VL Q+ ++ A L V+DQHAADER+ E LR + L+GE
Sbjct: 439 FGEPDEPNYERLPDLRVLGQIQDTYVLCAAPKGLLVVDQHAADERVHYERLRAE-LAGET 497
Query: 1212 KSVAYLDAEQELVLPEIGYQLLQNFAEQIKD-WGWICNIHTQGSRSFNKNLNLLQRQITV 1270
+ Q LV P + +L AE G + + +R
Sbjct: 498 TT-------QTLVEP-VELELTAREAELFDAHEGALARVGFAATREGR-----------T 538
Query: 1271 ITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLP 1330
+ + AVP F LS L + L D T +V +L AC A+ SL
Sbjct: 539 VRIGAVPAAFDATLSPELLRDALSACLSGDPGETVEATVDELLGDLACYPAVTGNTSLRE 598
Query: 1331 SECALIVEELKQTSLCFQCAHGRPTTV 1357
++ L + C HGRPT +
Sbjct: 599 GSVVDLLGALDGCENPYACPHGRPTVI 625
>gi|229086317|ref|ZP_04218495.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-44]
gi|228697012|gb|EEL49819.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-44]
Length = 645
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 190/401 (47%), Gaps = 41/401 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G V+KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLVIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L + + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IRGYVTLPEVTRASRNYMSTIVNGRYVRNYVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P L++ L D+ P K V F + +L IE+ ++ A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLQLIEKTLQDAFKK------- 327
Query: 360 DVDMLEDAELPL------ESSRFQSHQSSTHLHSSPLKNLA 394
+ ++ DA + ES + Q H T SP+ N+
Sbjct: 328 -IQLIPDAGVTTKKKEKDESVQEQFHFEHTKPKESPMPNIV 367
>gi|365122672|ref|ZP_09339572.1| DNA mismatch repair protein MutL [Tannerella sp. 6_1_58FAA_CT1]
gi|363642178|gb|EHL81545.1| DNA mismatch repair protein MutL [Tannerella sp. 6_1_58FAA_CT1]
Length = 629
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 184/375 (49%), Gaps = 37/375 (9%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
I LP++V N + +G V+ VV+ELV N++DAGAT + + V ++V+D+G
Sbjct: 4 VIQLLPDSVANQIAAGEVIQRPASVVKELVENAIDAGATLIQIIVKDAGRTLIQVIDNGK 63
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+S L ERHATSK+ D+ + T GFRGEALASI+ ++ +E+ T+
Sbjct: 64 GMSETDARLSFERHATSKIRQAGDL---FSLHTMGFRGEALASIAAIAQVELRTRRIEDE 120
Query: 122 NGY-----RKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G V++ +C+ VG+ +++FYN P RRK+++S+ + L ++
Sbjct: 121 VGTAIALAASVVESQECVSC-------PVGSNFAVKNIFYNVPARRKFLKSNQVE-LSNI 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
RIAL++P+++F+ + ++E L +S+ +IS FG L V
Sbjct: 173 LSEFERIALINPEIAFELVHNDNE---LFNLPASNFRQRIISLFGKGMNQQLLTVEVETS 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++ISGYI P S A QY ++N RY+ HK + S++
Sbjct: 230 LVKISGYIGKPEASRKRNALQYFFVNGRYMRHPYFHKAVMQ---SYE------------- 273
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
+ P Y +NL + D+ P KT + F++ +P+ + A++ A K A
Sbjct: 274 -QLIPVGEMPNYFINLTVDPASIDVNIHPTKTEIKFENEQPIWQILSAAVKEALGKFSAV 332
Query: 357 DSFDVDMLEDAELPL 371
S D DM E+P+
Sbjct: 333 PSIDFDMEGAPEIPV 347
>gi|358465302|ref|ZP_09175252.1| DNA mismatch repair protein [Streptococcus sp. oral taxon 058 str.
F0407]
gi|357065797|gb|EHI75972.1| DNA mismatch repair protein [Streptococcus sp. oral taxon 058 str.
F0407]
Length = 649
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 205/437 (46%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAMDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGQV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF + E+ T + + +G+ + + +D E
Sbjct: 175 VNRLGLAHPEISFSLVS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIAIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ +R + Q++ PLK + +++++ E R + E
Sbjct: 330 TLIPDALENLAKSTVRNRQKVEQTTL-----PLKE-----NTLYYEQTEPPRPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL+EE ++ F++
Sbjct: 380 HQVELSEEGQDLTLFAK 396
>gi|197122538|ref|YP_002134489.1| DNA mismatch repair protein [Anaeromyxobacter sp. K]
gi|229890120|sp|B4UCW3.1|MUTL_ANASK RecName: Full=DNA mismatch repair protein MutL
gi|196172387|gb|ACG73360.1| DNA mismatch repair protein MutL [Anaeromyxobacter sp. K]
Length = 607
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 173/361 (47%), Gaps = 37/361 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I+ LP + N + +G V+ +V+ELV N++DAGAT V V V V+V DD
Sbjct: 1 MPRIHVLPPGLVNQIAAGEVVERPASIVKELVENALDAGATSVGVDVEEGGLALVRVADD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSG+ RD +L ERHATSK L D + IGT GFRGEA+ +I+ VS + T A
Sbjct: 61 GSGMDRDDALLALERHATSK---LRDAEGLAAIGTMGFRGEAVPAIASVSRFRLDTSAGE 117
Query: 120 RPNGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R ++G LG + + GTTV RDLF+N P RRK+M+++ + H V +
Sbjct: 118 DGAGTRVEIEGG---VLGEVAPVARPRGTTVEVRDLFFNTPARRKFMRAASTEAGH-VSE 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDGA 237
V+R+AL P V F + S L+ + LA + G E L V+A G
Sbjct: 174 AVIRLALARPDVGFT---LRSGGRLVLGARAGGGLADRAGQALGREAHRHLLPVDARRGE 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVC-KGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ + G I SP S + Y+++N RYV + H +L A +
Sbjct: 231 VRVHGLICSPDHSEATGRALYLFVNGRYVRDRAAAHAVLRAFAGTLPPGRH--------- 281
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-WM 351
PA +L + P D+ P K V F + ++ + + A+R+A W+
Sbjct: 282 ---------PAGVLFVELPLHRVDVNVHPQKLEVRFAEGREVFDALFHTVAGALRTAPWL 332
Query: 352 K 352
+
Sbjct: 333 R 333
>gi|424788681|ref|ZP_18215431.1| DNA mismatch repair MutL family protein [Streptococcus intermedius
BA1]
gi|422112461|gb|EKU16248.1| DNA mismatch repair MutL family protein [Streptococcus intermedius
BA1]
Length = 648
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 189/404 (46%), Gaps = 44/404 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 1 MSKIIELPEKLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLKSIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEAL SI+ VS L I T
Sbjct: 61 GEGIEHEEVPLALRRHATSKIKKQADL---FRIRTLGFRGEALPSIASVSCLTIETATET 117
Query: 120 RPNGYRKVMKGS--KCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G V +G +C ++ VGT + +LF+N PVR KYM+S ++ H V
Sbjct: 118 DQYGTLLVARGGEIEC----VEPTSSTVGTKIKVENLFFNTPVRLKYMKSQQAELSHIV- 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R++L HP+++F I+ ++ T + + + +G+ + E++A++
Sbjct: 173 DVMNRLSLAHPEIAFTLIN--DGKKMTQTVGTGNLRQAIAGVYGLTTAKKMIEISASNLD 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
E+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 231 FEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDG 271
Query: 298 KRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW----- 350
SK P ++ ++ L D+ P K V ++ I +AI ++
Sbjct: 272 YGSKLMVGRFPIAVIAIQIDPYLADVNVHPTKQEVRISKERELMVLISQAIAASLKEYDL 331
Query: 351 ----MKKIAHDSFD-VDMLEDAELPLESSRFQSHQSSTHLHSSP 389
++ +A + + V E LPL+ +R Q T P
Sbjct: 332 IPDALENLAKSTINRVSKPEQTSLPLKENRLYYDQGRTDFFVKP 375
>gi|152976134|ref|YP_001375651.1| DNA mismatch repair protein [Bacillus cytotoxicus NVH 391-98]
gi|189030390|sp|A7GR98.1|MUTL_BACCN RecName: Full=DNA mismatch repair protein MutL
gi|152024886|gb|ABS22656.1| DNA mismatch repair protein MutL [Bacillus cytotoxicus NVH 391-98]
Length = 649
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 174/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L E + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDEQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE++T
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELVTSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGEIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K + +LL T + +L + + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNTKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IRGYVTLPEVTRASRNYMSTIVNGRYVRNYVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L FIE+ ++ A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLQFIEQTLQDAFKK 327
>gi|431796161|ref|YP_007223065.1| DNA mismatch repair protein MutL [Echinicola vietnamensis DSM
17526]
gi|430786926|gb|AGA77055.1| DNA mismatch repair protein MutL [Echinicola vietnamensis DSM
17526]
Length = 623
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 176/352 (50%), Gaps = 37/352 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+A+ N + +G V+ + ++EL+ N+VDAGAT + V V ++V+D+G G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPSSALKELLENAVDAGATDIQVLVKEAGKMLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ +D I TFGFRGEA+ASI+ V+ +E+ T+A G
Sbjct: 65 MSITDARMCFERHATSKI---RSSEDLFAIRTFGFRGEAMASIAAVAQVELKTRAKGEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G ++GS+ + + V GT++ ++LF+N P RR +++S+P ++ H V++
Sbjct: 122 GTLICIEGSE-----VKKQEPVVCPEGTSIAVKNLFFNVPARRNFLKSNPVEMKHIVEE- 175
Query: 180 VLRIALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
R+AL +P VSF I DME L S ++ FG S L
Sbjct: 176 FQRVALANPAVSFSLIHNDME-----LFKLSPGKLSQRIVGIFGKNYQSQLVSCEEETPH 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ I GY+ P ++ + QY ++N+RY+ LNH + N F +G
Sbjct: 231 VSIKGYVGKPENAKKSRGEQYFFVNNRYIKSN----YLNHAVS-----------NAF-EG 274
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
S Q P Y+L L S D+ P KT + F D + + + ++ A
Sbjct: 275 LMSPDQH-PFYVLFLELDPSHIDINVHPTKTEIKFDDERTIYSVVRAGVKQA 325
>gi|414157709|ref|ZP_11414005.1| DNA mismatch repair protein mutL [Streptococcus sp. F0441]
gi|410871627|gb|EKS19574.1| DNA mismatch repair protein mutL [Streptococcus sp. F0441]
Length = 649
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 168/349 (48%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSILTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
SK P ++++ L D+ P K V ++A + AI
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAI 322
>gi|323350706|ref|ZP_08086367.1| DNA mismatch repair protein HexB [Streptococcus sanguinis VMC66]
gi|322123126|gb|EFX94817.1| DNA mismatch repair protein HexB [Streptococcus sanguinis VMC66]
Length = 672
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 215/469 (45%), Gaps = 60/469 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 26 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKTIQVTDN 85
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 86 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 142
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 143 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 197
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 198 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 254
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 255 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 295
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 296 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ- 354
Query: 355 AHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S + Q+S L + L +Q D + +++
Sbjct: 355 -------DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQL 407
Query: 409 TFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+F+E + E E E P+ +S FAE P+ ++DH
Sbjct: 408 SFEESAEPIHEATNEKAE------PQPTSV----KFAERKPVSYDQLDH 446
>gi|363749433|ref|XP_003644934.1| hypothetical protein Ecym_2384 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888567|gb|AET38117.1| Hypothetical protein Ecym_2384 [Eremothecium cymbalariae
DBVPG#7215]
Length = 746
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 178/350 (50%), Gaps = 33/350 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
MG + +L + V ++S + + V ELV NSVD+G V VYV V V V DDG
Sbjct: 1 MGKLEKLQDDVLQLLQSQISIVSIGSAVRELVQNSVDSGCANVEVYVDVGRWKVVVKDDG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH-- 118
GIS + L ++G+++ TSKL +L ++ GI TFGFRGE + ++S++S + ++++ H
Sbjct: 61 HGISPEDLNMVGQKNFTSKLRNLESLE---GIRTFGFRGEGIFTLSNISKVTVVSRYHEY 117
Query: 119 ----GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPK-KVL 173
R R VM G K + + GTTVV DLFYN PVRRK + P KV
Sbjct: 118 NSIWMRALPSRAVMVGPKDAEKLMYAVKNSTGTTVVLTDLFYNLPVRRKMITKEPMYKVY 177
Query: 174 HSVKKCVLRIALVHP--KVSFKFIDMESEDELLCTCSSSSPLAL---LISSF-------- 220
+K+ +L++ + P VS FID ++C+ + S + L L S F
Sbjct: 178 DEIKRYILQVLICLPVLNVSVVFIDGSQRKTIICSKNISKTVQLSKSLTSIFQNTFGAIC 237
Query: 221 GIEDFSFLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL-- 278
G E+F + V+A + G IS + + +Q++YIN + + +LN +
Sbjct: 238 GPENFKY---VSARYQDFIVDGIISVI--PVPTRDYQFIYINKQSYEDKSFYVMLNKIFR 292
Query: 279 AASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKT 328
+A+F SD++ ++ +K + P +L+ CP+S+ DL P K
Sbjct: 293 SANFGTSDAYISD---VKSVGQPYSSYPVFLIKCACPNSVSDLMQHPAKV 339
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 113/234 (48%), Gaps = 27/234 (11%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGGT-------LAVIDQHAADERIRLEE-LRHKVLSG 1209
I KS L+D V+ QVDKKFI + + L ++DQHAADERI+LE +R +++
Sbjct: 497 IKKSQLKDCIVINQVDKKFILLKLQPSKFNKNPLLLILDQHAADERIKLETYIRDYLINI 556
Query: 1210 EGKSVAYLDAEQELVLPEIGYQ--LLQNFAEQIKDWGWICNIHTQGSRS-----FNKNLN 1262
G + + +P + L +++ ++ WG+ I S F L
Sbjct: 557 LGPFPLDQNVNCSIKIPVTSTEAELFKSYKDEFSFWGFNFTIEETTGESIMLITFVPRLV 616
Query: 1263 LLQRQITVITLLAVPCIFGVNL------------SDVDLLEFLQQLADTDGSSTTPPSVL 1310
+ + L V G +L S V E L L + P ++
Sbjct: 617 DARAKNCATYLKKVLLQHGYDLKSHKKIRASSLKSTVLPNEMLDNLQWWKYINAMPRLLI 676
Query: 1311 RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEA 1364
+ NSKACR A+MFGD+L EC L++ EL + ++ FQCAHGRP+ VP+V ++A
Sbjct: 677 EIFNSKACRSAVMFGDTLTHEECVLLINELSKCNIPFQCAHGRPSIVPIVEMQA 730
>gi|75760973|ref|ZP_00740979.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228902271|ref|ZP_04066431.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 4222]
gi|434376826|ref|YP_006611470.1| DNA mismatch repair protein [Bacillus thuringiensis HD-789]
gi|74491537|gb|EAO54747.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228857386|gb|EEN01886.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 4222]
gi|401875383|gb|AFQ27550.1| DNA mismatch repair protein [Bacillus thuringiensis HD-789]
Length = 654
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 174/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 ITGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|422853252|ref|ZP_16899916.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK160]
gi|325697264|gb|EGD39150.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK160]
Length = 672
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 215/469 (45%), Gaps = 60/469 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 26 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 85
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 86 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 142
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 143 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 197
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 198 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 254
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 255 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 295
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 296 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ- 354
Query: 355 AHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S + Q+S L + L +Q D + +++
Sbjct: 355 -------DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQL 407
Query: 409 TFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+F+E + E E E P+ +S FAE P+ ++DH
Sbjct: 408 SFEESAEPIHEATNEKAE------PQPTSV----KFAERKPVSYDQLDH 446
>gi|206900128|ref|YP_002250800.1| DNA mismatch repair protein MutL [Dictyoglomus thermophilum H-6-12]
gi|238058931|sp|B5YE42.1|MUTL_DICT6 RecName: Full=DNA mismatch repair protein MutL
gi|206739231|gb|ACI18289.1| DNA mismatch repair protein MutL [Dictyoglomus thermophilum H-6-12]
Length = 575
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 171/357 (47%), Gaps = 41/357 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDD 59
MG + LPE +RN + +G V+ VV+ELV NS+DAGAT++ V + + V+DD
Sbjct: 1 MGKVVLLPEELRNKIAAGEVVERPVSVVKELVENSIDAGATRIIVEFANGGETLISVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++R+ +L R ATSK + +D I T GFRGEALASI+ VS +E+ +K
Sbjct: 61 GEGMTREDAILALNRFATSK---IKTEEDLYNIKTLGFRGEALASIASVSKMELRSKTEL 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ KV G + ++ + GT + DLFYN P R+K+++S + + +
Sbjct: 118 EDGVFIKVEGG---VIKEVNLWQGSKGTVIKVSDLFYNVPARKKFLKSKATET-NLIIDF 173
Query: 180 VLRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
V RIA+ +P++SF+ I D +S+ T L+ F I L +G
Sbjct: 174 VKRIAIAYPQISFQLIQDGKSK---FITPGDGDLENLISLLFDIRVQESLISFQKREGDY 230
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G++S P I++K+ Y Y+N R W NN L+
Sbjct: 231 CIEGFVSKPGKLIALKSQDYFYVNRR-----------------------WVRNNTILQAI 267
Query: 299 RSKSQA------CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
R + P ++ L P+S D+ P K V F+ + V F+ R+IR A
Sbjct: 268 REGYKGRILDGYFPFSIIFLTVPYSEVDVNVHPTKREVKFQKEKEVYEFVFRSIREA 324
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 30/194 (15%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL------DAE 1220
+++ Q+ +I + + +IDQHAA ERI+ EEL+ ++ G ++V L +E
Sbjct: 389 RIVGQIFDNYIILETKDKVYIIDQHAAHERIKYEELKEELNLGYIQNVEILFPVVIEVSE 448
Query: 1221 QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF 1280
+E +L + LL+ FA +D+G H + + + LN + ++ +F
Sbjct: 449 EEKILLDKYKDLLERFAFSWEDFG---PYHIRIVKVPYEFLNFDSK--------SIENLF 497
Query: 1281 GVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEEL 1340
+SD+ + L +L D +++ S AC A+ G+ L+ E ++++ +
Sbjct: 498 REIISDISEKD-LSKLED------------KIIKSMACHSAVRSGNILIREEMEMLIKLI 544
Query: 1341 KQTSLCFQCAHGRP 1354
+ ++ C HGRP
Sbjct: 545 FEKNIPLTCPHGRP 558
>gi|15674190|ref|NP_268365.1| DNA mismatch repair protein [Lactococcus lactis subsp. lactis
Il1403]
gi|12725273|gb|AAK06306.1|AE006449_12 DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis
Il1403]
Length = 695
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 174/352 (49%), Gaps = 30/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
+G I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 40 VGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 99
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ ++ + L RHATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 100 GLGLEKEDVALALRRHATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSTAE 156
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 157 EESGTKLVAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITDI 213
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D E
Sbjct: 214 INRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFE 271
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
++GY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 272 LTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGYG 312
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
R P +L+++ +L D+ P K V ++A I +AI A
Sbjct: 313 NRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAIDEA 364
>gi|228909592|ref|ZP_04073415.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 200]
gi|228849881|gb|EEM94712.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 200]
Length = 647
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 174/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 ITGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|334366421|ref|ZP_08515353.1| DNA mismatch repair protein, C-terminal domain protein [Alistipes
sp. HGB5]
gi|313157387|gb|EFR56810.1| DNA mismatch repair protein, C-terminal domain protein [Alistipes
sp. HGB5]
Length = 679
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 173/369 (46%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LPE V N + +G V+ VV+E++ N++DAGA V V + +++VDDG G
Sbjct: 5 IRLLPEVVANQIAAGEVVNRPASVVKEMMENAIDAGARTVKVNFRDGGKDLIQIVDDGCG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + +RHATSK+ +DD + TFGFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSPIDARMAFDRHATSKI---TSVDDIYALNTFGFRGEALASIAAVAQVELRTRQEGDEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + + G + + G VG+ R+LFYN P RR+++ S +K R
Sbjct: 122 GTQTEINGGQ--FAGQTPVMCPVGSQFFVRNLFYNVPARRRFLDKSTTSAAQ-IKSEFQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL +P+++F ++ + D + T ++S ++ G L EV A+ I G
Sbjct: 179 VALCNPQIAF---ELYANDAPVYTLGAASLAGRIVDVVGRHIKQNLLEVEADTSIARIEG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
YI P + QY+++N RY +S+ S KA +
Sbjct: 236 YIGRPAAAKRRNGEQYLFVNGRY------------FKSSYLTSAIMKAYEKLI-----PE 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
+ P+Y L L S D+ P KT V F D E V + A+R K A D D
Sbjct: 279 SSSPSYFLYLTIDPSRIDVNVHPQKTEVKFADEEAVWQIVNAAVRETLAKTGAVPLMDFD 338
Query: 363 MLEDAELPL 371
E+P+
Sbjct: 339 REGIVEIPV 347
>gi|302342260|ref|YP_003806789.1| DNA mismatch repair protein MutL [Desulfarculus baarsii DSM 2075]
gi|301638873|gb|ADK84195.1| DNA mismatch repair protein MutL [Desulfarculus baarsii DSM 2075]
Length = 615
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 185/379 (48%), Gaps = 32/379 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
+ LP+ V N + +G V+ V++ELV N++DAGA +V + V ++V DDG G
Sbjct: 10 VRLLPDEVANQIAAGEVVERPASVLKELVENALDAGARRVQIDVEAAGRGLIRVADDGHG 69
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S D L+L ERHATSKLG DD G+ T GFRGEAL SI+ VS L I T+
Sbjct: 70 MSADDLLLAVERHATSKLGQ---ADDLIGVRTLGFRGEALPSIASVSRLRITTRQAADEV 126
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V++G G R VG+TV +RDLF+N P RRK+++ + H + + R
Sbjct: 127 GALLVIEGGVIRQSGQIGCR--VGSTVEARDLFFNIPARRKFLRGQITEAGH-LSAALTR 183
Query: 183 IALVHPKVSFKF-IDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
+AL P V+F++ + ++ +L T + +A L+ G E + + ++ G + +
Sbjct: 184 LALGWPGVAFRYAVGGKALHDLPATDDLTGRVAGLL---GREAAAHMVGLDQRVGPIRLW 240
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G ++P S S +V++N R+V K+L H +A +G L +R
Sbjct: 241 GLAATPAHSRSAADQVFVFVNGRFVRD----KILLHAVG--------QAYHGLLPAERR- 287
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV----LAFIERAIRSAWMKKIAHD 357
P +L+L L D+ P K V F+ V + + R + A +
Sbjct: 288 ----PVAVLHLELDPELVDVNVHPAKIEVRFRQQREVHDALVLALRRGLAQAAPARGVAP 343
Query: 358 SFDVDMLEDAELPLESSRF 376
+F D A L +E + +
Sbjct: 344 AFGGDASAPAPLAVEKAAW 362
>gi|390945647|ref|YP_006409407.1| DNA mismatch repair protein MutL [Alistipes finegoldii DSM 17242]
gi|390422216|gb|AFL76722.1| DNA mismatch repair protein MutL [Alistipes finegoldii DSM 17242]
Length = 679
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 173/369 (46%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LPE V N + +G V+ VV+E++ N++DAGA V V + +++VDDG G
Sbjct: 5 IRLLPEVVANQIAAGEVVNRPASVVKEMMENAIDAGARTVKVNFRDGGKDLIQIVDDGCG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + +RHATSK+ +DD + TFGFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSPIDARMAFDRHATSKI---TSVDDIYALNTFGFRGEALASIAAVAQVELRTRQEGDEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + + G + + G VG+ R+LFYN P RR+++ S +K R
Sbjct: 122 GTQTEINGGQ--FAGQTPVMCPVGSQFFVRNLFYNVPARRRFLDKSTTSAAQ-IKSEFQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL +P+++F ++ + D + T ++S ++ G L EV A+ I G
Sbjct: 179 VALCNPQIAF---ELYANDASVYTLGAASLAGRIVDVVGRHIKQNLLEVEADTSIARIEG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
YI P + QY+++N RY +S+ S KA +
Sbjct: 236 YIGRPAAAKRRNGEQYLFVNGRY------------FKSSYLTSAIMKAYEKLI-----PE 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
+ P+Y L L S D+ P KT V F D E V + A+R K A D D
Sbjct: 279 SSSPSYFLYLTIDPSRIDVNVHPQKTEVKFADEEAVWQIVNAAVRETLAKTGAVPLMDFD 338
Query: 363 MLEDAELPL 371
E+P+
Sbjct: 339 REGIVEIPV 347
>gi|442804337|ref|YP_007372486.1| DNA mismatch repair protein MutL [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740187|gb|AGC67876.1| DNA mismatch repair protein MutL [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 656
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 171/353 (48%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
MG + L E N + +G V+ VV+E+V N++DA AT + V + GV + +K+V
Sbjct: 1 MGKVVILDENTANQIAAGEVIERPASVVKEMVENAIDAHATSITVEITNGGVKS--IKIV 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI D + L ERHATSK+ +DD T + T GFRGEALASI+ VS +E+ITK
Sbjct: 59 DNGDGIEGDDVELAFERHATSKI---RSIDDLTRLSTMGFRGEALASIAAVSKVEVITKT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G R +++G K + K GTT + R+LFYN P R K+++ + + +
Sbjct: 116 EDAKTGTRVIVEGGKVVLSEPTGAPK--GTTFIVRELFYNTPARYKFLKKDTTEATY-IH 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ +IAL P +S KF++ ++ T + L+ + S FG + + VN
Sbjct: 173 DVISKIALARPDISIKFVNQGK--TVIHTPGNHDLLSTVYSLFGKDTARAVIPVNLTFNG 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+++SG++ P S + + V++N R V I + +++K
Sbjct: 231 VKVSGFVGKPEISRGNRNLEMVFVNGRVVYNRTIITAIE---------EAYKT------- 274
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
R + P +L + P D+ P K V F D V + A+ A
Sbjct: 275 -RLMQKRFPFTVLKVDVPPETVDVNVHPAKLEVRFSDENMVYRTVYMAVSDAL 326
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 26/205 (12%)
Query: 1159 NKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLD 1218
++ L +A+++ Q +I + G + VIDQHAA ERIR E LR + E S L
Sbjct: 461 DRERLLNARIIGQAFDSYIILEEGEDVFVIDQHAAHERIRFETLREWFVHEEAFSQGLLS 520
Query: 1219 AEQELVLPEIGYQLLQNFAE---QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
V+ E+ Q + F E I+ G+ + G+R+ + + A
Sbjct: 521 P----VMVELTQQEMHEFTELEPYIRKLGFEAEVF--GNRT--------------VLVRA 560
Query: 1276 VPCIFGVNLSDVDLLEFLQQLA-DTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1334
+P + SD D + L +L+ +T G P + AC+ AI + E
Sbjct: 561 IPYLLTEGFSDRDFRDILGKLSEETRGVLEIIPE--ETIYMMACKSAIKANRPMSEMEIQ 618
Query: 1335 LIVEELKQTSLCFQCAHGRPTTVPL 1359
+V EL + + C HGRP + +
Sbjct: 619 SLVRELVKCENPYTCVHGRPVIISI 643
>gi|295110016|emb|CBL23969.1| DNA mismatch repair protein MutL [Ruminococcus obeum A2-162]
Length = 674
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 186/365 (50%), Gaps = 29/365 (7%)
Query: 2 GTINRLPEAVRNTV---RSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVV 57
G + ++ +NT+ +G V+ + VV+ELV N++DAGAT V V + +++
Sbjct: 3 GALRKIAVLDQNTIDKIAAGEVVERPSSVVKELVENAIDAGATAVTVEITDGGKKLIRIT 62
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+GSG+ + + L RHATSK+ + D++ I + GFRGEAL+SI+ VS +E+ITK
Sbjct: 63 DNGSGMESEQIPLAFLRHATSKIEKVEDLEH---IASLGFRGEALSSIAAVSQVELITKT 119
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
+G R V++G K + L ++ GTT + R+LFYN P R K+++S + + +
Sbjct: 120 PSDISGSRYVIEGGKEIAL--EELGAPEGTTFLVRNLFYNTPARSKFLKSDMTEA-NYIH 176
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ ++AL HP++SFK+I +++ L T + S ++ S +G E L +VN +
Sbjct: 177 TLMEQLALSHPEISFKYI--QNKQVKLHTSGNYSVKDVIYSVYGREIAKALLDVNYENSF 234
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+++ G++ P + ++F+ YIN RYV I K + + A GFL
Sbjct: 235 MKVEGFVGKPEIARGNRSFENYYINGRYVKNNIITKAIEN------------AYRGFLMQ 282
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
+ P L + + D+ P K V F + V + +RSA +K
Sbjct: 283 HK-----FPFVSLRMEMEGNDLDVNVHPAKREVRFAREQEVYDAVYDMVRSALTRKEMIP 337
Query: 358 SFDVD 362
VD
Sbjct: 338 KVSVD 342
Score = 41.2 bits (95), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 29/191 (15%)
Query: 1187 VIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWI 1246
+IDQHAA E++ E + + S YL + L ++L + + + +G+
Sbjct: 507 IIDQHAAHEKVYYERMVKQFREHSIDS-QYLSPPMIVTLSMQEEEVLNSNKDYFEQFGF- 564
Query: 1247 CNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLSDVDLLEFLQQLADTDGSSTT 1305
I G R + + AVP ++G+ D+ FL+ L + G+++
Sbjct: 565 -EIENFGGREYR--------------ISAVPSNLYGLTEEDL----FLEMLDNLSGNNSR 605
Query: 1306 PPSVLRVLNSK----ACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVN 1361
L + SK AC+ A+ ++ E +++EL + C HGRPT + +
Sbjct: 606 --DALDIFASKLATMACKAAVKGNHAMSFEEAEKLIDELLTLDNPYHCPHGRPTIIAMTR 663
Query: 1362 LEALHKQIAQL 1372
E L K+ ++
Sbjct: 664 TE-LEKKFKRI 673
>gi|168486054|ref|ZP_02710562.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC1087-00]
gi|419441616|ref|ZP_13981651.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13224]
gi|419509519|ref|ZP_14049164.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP141]
gi|421212219|ref|ZP_15669185.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070108]
gi|421214444|ref|ZP_15671379.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070109]
gi|183570845|gb|EDT91373.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC1087-00]
gi|379555112|gb|EHZ20181.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13224]
gi|379634705|gb|EHZ99269.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP141]
gi|395582064|gb|EJG42527.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070108]
gi|395582797|gb|EJG43247.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070109]
Length = 649
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 207/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|262283653|ref|ZP_06061418.1| DNA mismatch repair protein mutL [Streptococcus sp. 2_1_36FAA]
gi|262260710|gb|EEY79411.1| DNA mismatch repair protein mutL [Streptococcus sp. 2_1_36FAA]
Length = 648
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 216/469 (46%), Gaps = 59/469 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSLDAGASQITIEIEEAGLKTIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEN 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 118 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 173 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 271 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ- 329
Query: 355 AHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S + Q+S L + L +Q D + ++I
Sbjct: 330 -------DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQI 382
Query: 409 TFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+F++ K E E +E P S+S+ FAE + ++DH
Sbjct: 383 SFEKSAKPVHEATNEKSE------PPQSTSV---KFAERKLVSYDQLDH 422
>gi|357237177|ref|ZP_09124520.1| DNA mismatch repair protein [Streptococcus criceti HS-6]
gi|356885159|gb|EHI75359.1| DNA mismatch repair protein [Streptococcus criceti HS-6]
Length = 648
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 169/349 (48%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV N++DAG+T++ V + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVVERPSSVVKELVENAIDAGSTQITVEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI D +VL RHATSK+ + AD+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIENDDVVLSLRRHATSKIKNQADL---FRIRTLGFRGEALPSIASISDLTVKTAVKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G V KG + + + VGT + DLF+N P R KYM+S ++ H V
Sbjct: 118 AEYGTLLVAKGGEI--ISQEPVSTPVGTKITVEDLFFNTPARLKYMKSLQAELGHIV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R +L HP+++F I+ EL T + + +G+ + E++A+D E
Sbjct: 175 INRQSLGHPEIAFTLIN--DGRELTKTAGTGDLRQTIAGIYGLNTAKKMVEISASDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 233 VSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
SK P +++++ L D+ P K V + ++ I AI
Sbjct: 274 SKLMVGRFPLAVIDIQIDPYLADVNVHPTKQEVRISKEKELMQLIREAI 322
>gi|387762212|ref|YP_006069189.1| DNA mismatch repair protein MutL [Streptococcus salivarius 57.I]
gi|339292979|gb|AEJ54326.1| DNA mismatch repair protein MutL [Streptococcus salivarius 57.I]
Length = 647
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 178/353 (50%), Gaps = 38/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A G
Sbjct: 61 GEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISYLTIVTAADG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + V KG + E +D VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 EAYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD G
Sbjct: 227 SDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD---------G 271
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
+ G + P +++++ L D+ P K V + ++A I AI
Sbjct: 272 Y--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|322375073|ref|ZP_08049587.1| DNA mismatch repair protein HexB [Streptococcus sp. C300]
gi|321280573|gb|EFX57612.1| DNA mismatch repair protein HexB [Streptococcus sp. C300]
Length = 649
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 205/437 (46%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAMDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + + +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIAIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
S D LE+ L + R + T L PLK + +++++ E + + E
Sbjct: 330 SLIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSKPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL EE ++ F++
Sbjct: 380 HQVELTEEGRDLTLFAK 396
>gi|225873493|ref|YP_002754952.1| DNA mismatch repair protein MutL [Acidobacterium capsulatum ATCC
51196]
gi|254766152|sp|C1F876.1|MUTL_ACIC5 RecName: Full=DNA mismatch repair protein MutL
gi|225794076|gb|ACO34166.1| DNA mismatch repair protein MutL [Acidobacterium capsulatum ATCC
51196]
Length = 665
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 171/379 (45%), Gaps = 54/379 (14%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I L + V N + +G V+ VV+EL+ N++DA AT++ V V ++V D+
Sbjct: 1 MGRIRVLSDQVANQIAAGEVVDRPASVVKELLENAIDAEATRIRVEVEAGGRKLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ RD +L ERHATSK+ DD I T GFRGEAL SI+ +S LE+IT+A G
Sbjct: 61 GIGMMRDDAMLAFERHATSKI---RSSDDLLTIATLGFRGEALPSIASISRLEMITRAQG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + G K L ++D GT+ RDLFYN P RRK++++ ++ H V
Sbjct: 118 EETGTCIEIAGGKMLR--VEDAGAPPGTSFTIRDLFYNTPARRKFLKAESTELSH-VSAL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA------ 233
V AL HP F+ + LL + P + FG E + L + A
Sbjct: 175 VTHYALAHPDKHFEL--HSATHALLNAPPVNEPSERVFQIFGAETLNQLIPMAAERPFDR 232
Query: 234 ------------------NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLL 275
+ G L + G+IS P + Y++IN R V +L+
Sbjct: 233 AGLPEPPPWRRDQDYEPPDPGFLRVKGFISKPALQKLNRNSIYIFINRRLVRD----RLI 288
Query: 276 NHLAASFDCSDSWKANNGFLKGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFK 333
H +G R+ + P LL L P D+ P KT V F+
Sbjct: 289 LH---------------AITEGYRNIIPPTSFPVALLFLEMPPHEVDVNVHPAKTEVRFR 333
Query: 334 DWEPVLAFIERAIRSAWMK 352
+ F+ +IR+A MK
Sbjct: 334 QSSVLHDFLRDSIRNALMK 352
>gi|418038830|ref|ZP_12677146.1| hypothetical protein LLCRE1631_01953 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|354692837|gb|EHE92642.1| hypothetical protein LLCRE1631_01953 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 695
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 174/352 (49%), Gaps = 30/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
+G I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 40 VGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 99
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ ++ + L RHATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 100 GLGLEKEDVALALRRHATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSTAE 156
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + + KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 157 EESGTKLIAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITDI 213
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D E
Sbjct: 214 INRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFE 271
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
++GY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 272 LTGYVSIPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGYG 312
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
R P +L+++ +L D+ P K V ++A I +AI A
Sbjct: 313 NRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAIDEA 364
>gi|325956128|ref|YP_004286738.1| DNA mismatch repair protein [Lactobacillus acidophilus 30SC]
gi|325332693|gb|ADZ06601.1| DNA mismatch repair protein [Lactobacillus acidophilus 30SC]
Length = 626
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 188/385 (48%), Gaps = 35/385 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MPKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI RD + L RHATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIERDQVDLAFTRHATSKISNEHDL---FKVSTLGFRGEALASISAVSHVEILTAT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G G R G G +D GT + +DLF+N P R KY++ SP+ + +
Sbjct: 116 DG-AIGTRATFSGGNK--KGQEDAASQKGTKITVQDLFFNTPARLKYLR-SPRTEIMKIV 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R+AL +P+VSF + + LL T + + + + +G ++++ A D
Sbjct: 172 DIINRLALGYPQVSFTLSN--TGKILLRTTGNGNLKQTVANVYGRHIAEKMEDIEAEDTD 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+++G IS P + S + F + +N RY+ +++ N + G
Sbjct: 230 FKVTGLISKPELTRSTRNFISILLNGRYIR-------------------NFQLNTAIMDG 270
Query: 298 KRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
SK + P +++++ L D+ P K V + + I AI +A ++K+
Sbjct: 271 YGSKLEVRHYPIAVVSIKVDPLLVDVNVHPTKQEVRLSKEKELSRLITTAISNALVEKVE 330
Query: 356 HDSFDVDMLEDAELPLESSRFQSHQ 380
S ++ E ++ +F +Q
Sbjct: 331 QTSAFANLENKRETLVDQLQFNLNQ 355
>gi|157151210|ref|YP_001451301.1| DNA mismatch repair protein [Streptococcus gordonii str. Challis
substr. CH1]
gi|189030419|sp|A8AZU1.1|MUTL_STRGC RecName: Full=DNA mismatch repair protein MutL
gi|157076004|gb|ABV10687.1| DNA mismatch repair protein hexB [Streptococcus gordonii str.
Challis substr. CH1]
Length = 647
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 216/470 (45%), Gaps = 62/470 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKTIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEN 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 118 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 173 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 271 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIAASLKEQ- 329
Query: 355 AHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKN----LAKQRDHMFHKEC---ER 407
D++ DA L S + + S PLK K+R+ F K ++
Sbjct: 330 -------DLIPDALENLAKSTVK-RATKPEQTSLPLKENRLYYDKERNDFFLKPQVAEQQ 381
Query: 408 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
I+F+E + E +E E P+ +S FAE P ++DH
Sbjct: 382 ISFEESAEPIHEATDEKAE------PQPTSV----KFAERKPASYDQLDH 421
>gi|385261867|ref|ZP_10039984.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. SK643]
gi|385192589|gb|EIF39994.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. SK643]
Length = 649
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 169/349 (48%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
SK P ++++ L D+ P K V + ++A + AI
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAI 322
>gi|423359246|ref|ZP_17336749.1| DNA mismatch repair protein mutL [Bacillus cereus VD022]
gi|401085118|gb|EJP93364.1| DNA mismatch repair protein mutL [Bacillus cereus VD022]
Length = 647
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 174/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 ITGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|228966711|ref|ZP_04127755.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402558904|ref|YP_006601628.1| DNA mismatch repair protein [Bacillus thuringiensis HD-771]
gi|228792810|gb|EEM40368.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
sotto str. T04001]
gi|401787556|gb|AFQ13595.1| DNA mismatch repair protein [Bacillus thuringiensis HD-771]
Length = 647
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 174/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 ITGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|331267171|ref|YP_004326801.1| DNA mismatch repair protein MutL [Streptococcus oralis Uo5]
gi|326683843|emb|CBZ01461.1| DNA mismatch repair protein MutL [Streptococcus oralis Uo5]
Length = 649
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGQV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E + + E
Sbjct: 330 ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSKPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL EE ++ F++
Sbjct: 380 HQVELTEEGRDLTLFAK 396
>gi|321257301|ref|XP_003193541.1| mismatch repair-related protein [Cryptococcus gattii WM276]
gi|317460011|gb|ADV21754.1| Mismatch repair-related protein, putative [Cryptococcus gattii
WM276]
Length = 760
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 159/292 (54%), Gaps = 17/292 (5%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC--YVKVVD 58
M I LP T+RS +L L ++ EL+ NS+DAGATK+ YV + ++V D
Sbjct: 1 MPDILPLPRPTSTTLRSSIILPSLAQIFSELLQNSLDAGATKIECYVNMAKGSESLRVED 60
Query: 59 DGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 118
DG+GIS+DGL +G+R TSK H + +G++GFRGEALASI+ +SLL+I T+
Sbjct: 61 DGTGISKDGLAKIGKRFRTSKEIHEGGLGP---VGSYGFRGEALASIASLSLLDITTRRA 117
Query: 119 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
P Y K++K SK L+ G + +R GTTVV R++F PVRR+ + ++ +L +
Sbjct: 118 SFPV-YTKILKHSKTLFEGPNPDRHIAGGHGTTVVVREIFRTIPVRREELAATSSTLLMT 176
Query: 176 -VKKCVLRIALVHPKVSFKFIDMESE-----DELLCTCSSSSPLALLISSFGIEDFSFLD 229
+KK V +AL +P V + + S ++ +S S L + S +G +
Sbjct: 177 QLKKVVETLALGNPGVRWVLWEERSTGTGGLKRIMGVNASESALDVFKSLYGSALVHSVQ 236
Query: 230 EVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAAS 281
++ G ++ G+IS D KA Q++YIN + +G IH + AS
Sbjct: 237 KIRVTAGKKKVDGFISISGD--VSKAHQHLYINKYPIDRGDIHTAIARKFAS 286
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 136/297 (45%), Gaps = 47/297 (15%)
Query: 1117 RNGHPQTTNN--NISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDK 1174
R GH + ++ +++C H N++ + S F I+KS L + VL QVD+
Sbjct: 442 RPGHGVSDDDVASLACCSHEPTNLVSLQSPF-----PFTTDVQISKSSLSEGIVLGQVDQ 496
Query: 1175 KFIPVVAGGT-----LAVIDQHAADERIRLEELRHKVLSGEGK---SVAYLDAEQELV-L 1225
KFI VV T LA++DQHAADERI +E++ ++ G + SVA L Q ++ L
Sbjct: 497 KFIAVVLHTTINLTTLALVDQHAADERISVEKVLLELCEGFARDDLSVAELTKTQPMIIL 556
Query: 1226 PEIGYQLLQ--NFAEQIKDWGWICNIHTQGSRSFNKN-------LNLLQR-------QIT 1269
+ ++L K WG + ++ S+ L LL R ++T
Sbjct: 557 TQAETRILSQPGVLPLFKRWGIRLTVPSELSQGEYVQVKVDAVPLALLNRLGRKEGLEMT 616
Query: 1270 VITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST---------------TPPSVLRVLN 1314
+ +P + +L++ L+ A G P +L + N
Sbjct: 617 RLVRGYLPVVEEHTGEITNLVKNLEGKAMVGGEGGDIEGYGGDWGRVMRFMPREMLELAN 676
Query: 1315 SKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQ 1371
SKACRGAIMF D L +C +V +L +T F CAHGRP+ VPLV L K I +
Sbjct: 677 SKACRGAIMFEDRLSYDQCGRLVHQLSRTRFPFMCAHGRPSMVPLVILNEQDKPITK 733
>gi|315037643|ref|YP_004031211.1| DNA mismatch repair protein [Lactobacillus amylovorus GRL 1112]
gi|312275776|gb|ADQ58416.1| DNA mismatch repair protein [Lactobacillus amylovorus GRL 1112]
Length = 626
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 188/385 (48%), Gaps = 35/385 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MPKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI RD + L RHATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIERDQVDLAFTRHATSKISNEHDL---FKVSTLGFRGEALASISAVSHVEILTAT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G G R G G +D GT + +DLF+N P R KY++ SP+ + +
Sbjct: 116 DG-AIGTRATFSGGNK--KGQEDAASQKGTKITVQDLFFNTPARLKYLR-SPRTEIMKIV 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R+AL +P+VSF + + LL T + + + + +G ++++ A D
Sbjct: 172 DIINRLALGYPQVSFTLSN--TGKILLRTTGNGNLKQTVANVYGRHIAEKMEDIEAEDTD 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+++G IS P + S + F + +N RY+ +++ N + G
Sbjct: 230 FKVTGLISKPELTRSTRNFISILLNGRYIR-------------------NFQLNTAIMDG 270
Query: 298 KRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
SK + P +++++ L D+ P K V + + I AI +A ++K+
Sbjct: 271 YGSKLEVRHYPIAVVSIKVDPLLVDVNVHPTKQEVRLSKEKELSRLITTAISNALVEKVE 330
Query: 356 HDSFDVDMLEDAELPLESSRFQSHQ 380
S ++ E ++ +F +Q
Sbjct: 331 QTSAFANLENKRETLVDQLQFNLNQ 355
>gi|419780685|ref|ZP_14306528.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK100]
gi|383185061|gb|EIC77564.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK100]
Length = 649
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIRNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E + + E
Sbjct: 330 ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSKPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL EE ++ F++
Sbjct: 380 HQVELTEEGRDLPLFAK 396
>gi|218898868|ref|YP_002447279.1| DNA mismatch repair protein [Bacillus cereus G9842]
gi|423561824|ref|ZP_17538100.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-A1]
gi|226723027|sp|B7ITM0.1|MUTL_BACC2 RecName: Full=DNA mismatch repair protein MutL
gi|218541786|gb|ACK94180.1| DNA mismatch repair protein MutL [Bacillus cereus G9842]
gi|401202081|gb|EJR08946.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-A1]
Length = 647
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 174/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 ITGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|419529357|ref|ZP_14068892.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40028]
gi|379576261|gb|EHZ41189.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40028]
Length = 649
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLNLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTESTRPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|238916922|ref|YP_002930439.1| DNA mismatch repair protein MutL [Eubacterium eligens ATCC 27750]
gi|238872282|gb|ACR71992.1| DNA mismatch repair protein MutL [Eubacterium eligens ATCC 27750]
Length = 625
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 180/346 (52%), Gaps = 38/346 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVVDDG 60
I L + N + +G V+ + VV+ELV N++DAGAT + V + G+ +++V D+G
Sbjct: 3 ITLLDQNTINKIAAGEVVERPSSVVKELVENAIDAGATAITVEIKEGGIS--FIRVTDNG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
SGI++D + + +RHATSK+ + D+ + + GFRGEALASI+ VS +E+ITK
Sbjct: 61 SGINKDEIEIAFKRHATSKIESIEDL---MAVSSLGFRGEALASIAAVSQVELITKTADS 117
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G R + G G+ E ++ GTT + R+LFYN PVRRK+++++ + + +
Sbjct: 118 LSGVRYTIDG------GVPGEVAEIGAPEGTTFIVRNLFYNTPVRRKFLKTATTEGGY-I 170
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V +AL HP +SF+FI + L T + + ++ + +G + + L E++
Sbjct: 171 GSLVEYLALSHPDISFRFIS--NNQNKLHTSGNMNLKDIIYNVYGRDITNNLYEISGKSQ 228
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+E SG+I P + ++ YIN RY+ I K + D++K GF+
Sbjct: 229 DIEASGFIGKPMVVRGNRTYENYYINGRYIKSSIITKAI---------EDAYK---GFI- 275
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 342
P ++ + ++ D+ P K + F + E + F+
Sbjct: 276 ----MPHNYPFSAIHFKINPAIIDVNVHPTKMELRFSNNEYIYNFV 317
>gi|218290140|ref|ZP_03494302.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius
LAA1]
gi|218239849|gb|EED07038.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius
LAA1]
Length = 628
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 168/351 (47%), Gaps = 28/351 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVD 58
MG I +P+ + + + SG V+ V+ELV NS+DAGAT++ V + G C V VVD
Sbjct: 1 MGKIQVMPKVMADQIASGEVVARPASCVKELVENSLDAGATRIEVSLAEGGIAC-VTVVD 59
Query: 59 DGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 118
DG G+S + VL RHATSK+ D+ I T GFRGEALA+I+ V+ + +IT+A
Sbjct: 60 DGEGMSPEDAVLAFHRHATSKVHEPRDL---ARIRTLGFRGEALAAIASVARVRLITRAR 116
Query: 119 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G +G ++G + + GTT+ RDLF+N P R KY++S+ + SV +
Sbjct: 117 GEESGVLVRVEGGEI--HPPEPVGAPFGTTMEVRDLFFNTPARLKYLRSAQTEQARSV-E 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
V R +L HP+V+ F+ L T + + +G+ + L EV+ G
Sbjct: 174 VVQRESLAHPEVA--FVCRTERQVLFQTPGRGDAREVWAALYGVGEARMLLEVHGATGDY 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ GY+ P + S + Y++IN R V + + + G+
Sbjct: 232 ALRGYVGRPTQARSSRQHGYLFINGRPVRNPAVQQAVER-----------------AYGE 274
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
R P Y L L +L D P K V + V +E A+R+A
Sbjct: 275 RLMVGRYPVYALYLEMDPALVDPNVHPQKWEVRLSEERDVCDLVESAVRAA 325
>gi|322374232|ref|ZP_08048764.1| DNA mismatch repair protein HexB [Streptococcus sp. C150]
gi|321276836|gb|EFX53909.1| DNA mismatch repair protein HexB [Streptococcus sp. C150]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 178/353 (50%), Gaps = 38/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A G
Sbjct: 61 GEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAADG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + V KG + E +D VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 EAYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD G
Sbjct: 227 SDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD---------G 271
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
+ G + P +++++ L D+ P K V + ++A I AI
Sbjct: 272 Y--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|421451448|ref|ZP_15900809.1| DNA mismatch repair protein mutL [Streptococcus salivarius K12]
gi|421453484|ref|ZP_15902840.1| DNA mismatch repair protein mutL [Streptococcus salivarius K12]
gi|400181793|gb|EJO16060.1| DNA mismatch repair protein mutL [Streptococcus salivarius K12]
gi|400181879|gb|EJO16141.1| DNA mismatch repair protein mutL [Streptococcus salivarius K12]
Length = 645
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 196/400 (49%), Gaps = 51/400 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A G
Sbjct: 61 GEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAADG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + V KG + E +D VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 EAYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD G
Sbjct: 227 SDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD---------G 271
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ G + P +++++ L D+ P K V + ++A I AI + ++
Sbjct: 272 Y--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAIAQSLREQ 329
Query: 354 IAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 391
D++ DA L S+R S T L PLK
Sbjct: 330 --------DLIPDALENLAKSSTRGVSKPVQTSL---PLK 358
>gi|229157347|ref|ZP_04285425.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 4342]
gi|228626074|gb|EEK82823.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 4342]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|404406120|ref|ZP_10997704.1| DNA mismatch repair protein MutL [Alistipes sp. JC136]
Length = 661
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 174/369 (47%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LPE V N + +G V+ VV+E++ N++DAGAT V V + +++VDDG G
Sbjct: 5 IRLLPEVVANQIAAGEVVNRPASVVKEMMENAIDAGATSVKVNFRDGGKDLIQIVDDGCG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + +RHATSK+G + D+ + TFGFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSPIDARMAFDRHATSKIGAVEDI---YALHTFGFRGEALASIAAVAQVELRTRQAGDEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + + G + + + VG+ R+LFYN P RR+++ S +K R
Sbjct: 122 GTQTEINGGQ--FAAQNPVMCPVGSQFFVRNLFYNVPARRRFLDKSTTSA-SQIKAEFQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IAL +P+++F ++ + D + T +SS ++ G L EV A+ I G
Sbjct: 179 IALCNPQIAF---ELYANDAPVYTLQASSLAGRIVDVVGRHIKQNLLEVEADTSIARIEG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
YI P + QY+++N R+ +S+ S KA K
Sbjct: 236 YIGRPAAAKKRNTEQYLFVNGRF------------FKSSYLTSAILKAYE-----KLIPE 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
+ P+Y L L D+ P KT V F D E V I A+R K A D D
Sbjct: 279 NSQPSYFLFLEIDPGRIDVNVHPQKTEVKFADEEAVWQIINAAVRETLAKTGAVPLMDFD 338
Query: 363 MLEDAELPL 371
E+P+
Sbjct: 339 REGMVEIPV 347
>gi|387783196|ref|YP_006069279.1| DNA mismatch repair protein mutL [Streptococcus salivarius JIM8777]
gi|338744078|emb|CCB94444.1| DNA mismatch repair protein mutL [Streptococcus salivarius JIM8777]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 178/353 (50%), Gaps = 38/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A G
Sbjct: 61 GEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAADG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + V KG + E +D VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 EAYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD G
Sbjct: 227 SDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD---------G 271
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
+ G + P +++++ L D+ P K V + ++A I AI
Sbjct: 272 Y--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|303259226|ref|ZP_07345204.1| DNA mismatch repair protein [Streptococcus pneumoniae SP-BS293]
gi|303260982|ref|ZP_07346931.1| DNA mismatch repair protein [Streptococcus pneumoniae SP14-BS292]
gi|303263309|ref|ZP_07349232.1| DNA mismatch repair protein [Streptococcus pneumoniae BS397]
gi|303265474|ref|ZP_07351374.1| DNA mismatch repair protein [Streptococcus pneumoniae BS457]
gi|303267968|ref|ZP_07353770.1| DNA mismatch repair protein [Streptococcus pneumoniae BS458]
gi|418138527|ref|ZP_12775359.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA13338]
gi|418179562|ref|ZP_12816137.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41688]
gi|421295458|ref|ZP_15746173.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58581]
gi|302637819|gb|EFL68305.1| DNA mismatch repair protein [Streptococcus pneumoniae SP14-BS292]
gi|302639644|gb|EFL70101.1| DNA mismatch repair protein [Streptococcus pneumoniae SP-BS293]
gi|302642664|gb|EFL73009.1| DNA mismatch repair protein [Streptococcus pneumoniae BS458]
gi|302644914|gb|EFL75161.1| DNA mismatch repair protein [Streptococcus pneumoniae BS457]
gi|302647082|gb|EFL77306.1| DNA mismatch repair protein [Streptococcus pneumoniae BS397]
gi|353846984|gb|EHE27011.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41688]
gi|353906234|gb|EHE81638.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA13338]
gi|395897527|gb|EJH08486.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58581]
Length = 649
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 205/437 (46%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L + T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLSTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP+ SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPETSFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPTRPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL EE ++ F++
Sbjct: 380 YQVELTEERQDLTLFAK 396
>gi|218904896|ref|YP_002452730.1| DNA mismatch repair protein [Bacillus cereus AH820]
gi|226723026|sp|B7JJ46.1|MUTL_BACC0 RecName: Full=DNA mismatch repair protein MutL
gi|218536438|gb|ACK88836.1| DNA mismatch repair protein MutL [Bacillus cereus AH820]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IQGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229174433|ref|ZP_04301965.1| DNA mismatch repair protein mutL [Bacillus cereus MM3]
gi|228608993|gb|EEK66283.1| DNA mismatch repair protein mutL [Bacillus cereus MM3]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLMIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>gi|423604603|ref|ZP_17580496.1| DNA mismatch repair protein mutL [Bacillus cereus VD102]
gi|401245223|gb|EJR51581.1| DNA mismatch repair protein mutL [Bacillus cereus VD102]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|385816998|ref|YP_005853388.1| DNA mismatch repair protein [Lactobacillus amylovorus GRL1118]
gi|327182936|gb|AEA31383.1| DNA mismatch repair protein [Lactobacillus amylovorus GRL1118]
Length = 634
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 190/386 (49%), Gaps = 37/386 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MPKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI RD + L RHATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIERDQVDLAFTRHATSKISNEHDL---FKVSTLGFRGEALASISAVSHVEILTAT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G G R G G +D GT + +DLF+N P R KY++ SP+ + +
Sbjct: 116 DG-AIGTRATFSGGNK--KGQEDAASQKGTKITVQDLFFNTPARLKYLR-SPRTEIMKIV 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDG 236
+ R+AL +P+VSF + + ++L + + L +++ +G ++++ A D
Sbjct: 172 DIINRLALGYPQVSFT---LSNTGKILLRTTGNGNLKQTVANVYGRHIAEKMEDIEAEDT 228
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+++G IS P + S + F + +N RY+ +++ N +
Sbjct: 229 DFKVTGLISKPELTRSTRNFISILLNGRYIR-------------------NFQLNTAIMD 269
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK +A P +++++ L D+ P K V + + I AI + ++K+
Sbjct: 270 GYGSKLEARHYPIAVVSIKVDPLLVDVNVHPTKQEVRLSKEKELSRLITTAISNVLVEKV 329
Query: 355 AHDSFDVDMLEDAELPLESSRFQSHQ 380
S ++ E ++ +F +Q
Sbjct: 330 EQTSAFANLENKRETLVDQLQFNLNQ 355
>gi|194398020|ref|YP_002036880.1| DNA mismatch repair protein [Streptococcus pneumoniae G54]
gi|418120296|ref|ZP_12757244.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44194]
gi|419490165|ref|ZP_14029907.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47179]
gi|421274150|ref|ZP_15724984.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA52612]
gi|238690840|sp|B5E6C5.1|MUTL_STRP4 RecName: Full=DNA mismatch repair protein MutL
gi|194357687|gb|ACF56135.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae G54]
gi|353794851|gb|EHD75203.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44194]
gi|379596445|gb|EHZ61249.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47179]
gi|395875985|gb|EJG87062.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA52612]
Length = 649
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 169/349 (48%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
SK P ++++ L D+ P K V + ++A + AI
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAI 322
>gi|52141721|ref|YP_085109.1| DNA mismatch repair protein [Bacillus cereus E33L]
gi|81686628|sp|Q636Q8.1|MUTL_BACCZ RecName: Full=DNA mismatch repair protein MutL
gi|51975190|gb|AAU16740.1| DNA mismatch repair protein, MutL family [Bacillus cereus E33L]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|206977890|ref|ZP_03238778.1| DNA mismatch repair protein MutL [Bacillus cereus H3081.97]
gi|217961189|ref|YP_002339757.1| DNA mismatch repair protein [Bacillus cereus AH187]
gi|229140409|ref|ZP_04268964.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST26]
gi|375285690|ref|YP_005106129.1| DNA mismatch repair protein mutL [Bacillus cereus NC7401]
gi|423353470|ref|ZP_17331097.1| DNA mismatch repair protein mutL [Bacillus cereus IS075]
gi|423567337|ref|ZP_17543584.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-A12]
gi|226723029|sp|B7HLA2.1|MUTL_BACC7 RecName: Full=DNA mismatch repair protein MutL
gi|206743890|gb|EDZ55309.1| DNA mismatch repair protein MutL [Bacillus cereus H3081.97]
gi|217067416|gb|ACJ81666.1| DNA mismatch repair protein MutL [Bacillus cereus AH187]
gi|228642970|gb|EEK99246.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST26]
gi|358354217|dbj|BAL19389.1| DNA mismatch repair protein mutL [Bacillus cereus NC7401]
gi|401089283|gb|EJP97454.1| DNA mismatch repair protein mutL [Bacillus cereus IS075]
gi|401214425|gb|EJR21155.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-A12]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|445370540|ref|ZP_21425882.1| DNA mismatch repair protein [Streptococcus thermophilus MTCC 5460]
gi|445385388|ref|ZP_21427590.1| DNA mismatch repair protein [Streptococcus thermophilus MTCC 5461]
gi|444751654|gb|ELW76371.1| DNA mismatch repair protein [Streptococcus thermophilus MTCC 5461]
gi|444751668|gb|ELW76384.1| DNA mismatch repair protein [Streptococcus thermophilus MTCC 5460]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 199/402 (49%), Gaps = 55/402 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V G+ +++
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSK--IQIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 59 DNGEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSITSISHLTIVTAA 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKV 172
G G + V KG + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 116 DGEVYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAEL 168
Query: 173 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEV 231
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E+
Sbjct: 169 AHIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEI 224
Query: 232 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 291
+ +D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 225 SNSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD-------- 270
Query: 292 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
G+ G + P +++++ L D+ P K V + ++A I+ AI +
Sbjct: 271 -GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALIKSAIAQSLR 327
Query: 352 KKIAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 391
++ D++ DA L S+R + T L PLK
Sbjct: 328 EQ--------DLIPDALENLAKSSTRGATRSVQTSL---PLK 358
>gi|418975629|ref|ZP_13523533.1| DNA mismatch repair protein [Streptococcus oralis SK1074]
gi|383347612|gb|EID25590.1| DNA mismatch repair protein [Streptococcus oralis SK1074]
Length = 649
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVSRGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALLSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSRPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|229191893|ref|ZP_04318863.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 10876]
gi|228591444|gb|EEK49293.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 10876]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|49479185|ref|YP_037829.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|81828232|sp|Q6HF47.1|MUTL_BACHK RecName: Full=DNA mismatch repair protein MutL
gi|49330741|gb|AAT61387.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQTAFKK 327
>gi|315221511|ref|ZP_07863431.1| DNA mismatch repair protein [Streptococcus anginosus F0211]
gi|315189345|gb|EFU23040.1| DNA mismatch repair protein [Streptococcus anginosus F0211]
Length = 688
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 173/356 (48%), Gaps = 31/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 41 MSKIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLRSIQVIDN 100
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEAL SI+ VS L I T
Sbjct: 101 GEGIEHEEVSLALRRHATSKIKKQADL---FRIRTLGFRGEALPSIASVSRLTIETATSS 157
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + +G + L + GT + DLF+N P R KYM+S ++ H V
Sbjct: 158 GAHGTLLIAQGGEVETL--EPSSCPRGTKIKVEDLFFNTPARLKYMKSQQAELSHIV-DV 214
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+V+F ++ E+ T + + + +G+ + E+ A+D E
Sbjct: 215 INRLSLAHPEVAFTLVN--DGKEMTRTAGTGNLRQAIAGIYGLTTAKKMIEILASDLDFE 272
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 273 VSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGYG 313
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
SK P ++++R L D+ P K V ++ I +AI SA +K+
Sbjct: 314 SKLMVGRFPIAVIDIRIDPYLADVNVHPTKQEVRISKERELMVLISQAI-SASLKE 368
>gi|384181578|ref|YP_005567340.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324327662|gb|ADY22922.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|301055258|ref|YP_003793469.1| DNA mismatch repair protein [Bacillus cereus biovar anthracis str.
CI]
gi|423550482|ref|ZP_17526809.1| DNA mismatch repair protein mutL [Bacillus cereus ISP3191]
gi|300377427|gb|ADK06331.1| DNA mismatch repair protein [Bacillus cereus biovar anthracis str.
CI]
gi|401190098|gb|EJQ97148.1| DNA mismatch repair protein mutL [Bacillus cereus ISP3191]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|225853787|ref|YP_002735299.1| DNA mismatch repair protein [Streptococcus pneumoniae JJA]
gi|254766179|sp|C1CBX8.1|MUTL_STRZJ RecName: Full=DNA mismatch repair protein MutL
gi|225722823|gb|ACO18676.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae JJA]
Length = 649
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 207/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|423401405|ref|ZP_17378578.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-2]
gi|423477890|ref|ZP_17454605.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6X1-1]
gi|401654395|gb|EJS71938.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-2]
gi|402428815|gb|EJV60907.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6X1-1]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLMIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>gi|291543952|emb|CBL17061.1| DNA mismatch repair protein MutL [Ruminococcus champanellensis
18P13]
Length = 657
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 182/355 (51%), Gaps = 34/355 (9%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
+I LP+ + + +G V+ V++ELV NS+DAGA+++ V + + Y+++ DDG
Sbjct: 2 SITVLPKELSELIAAGEVIERPASVIKELVENSIDAGASRITVEIRNGGSVYMRITDDGC 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI+ + + RHATSK+ AD+D+ I T GFRGEALAS++ V +E++TK G
Sbjct: 62 GIAPEEVPTAFLRHATSKILEKADLDN---IHTLGFRGEALASVAAVGRVEMLTKQAGAE 118
Query: 122 NGYR-KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS--VKK 178
G R ++ G++C G++ GTT+V RDLF+N P R+K+++ K V S V
Sbjct: 119 YGVRYQIEGGTEC---GMERTGCPEGTTIVIRDLFFNVPARQKFLK---KDVTESNAVSA 172
Query: 179 CVLRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
V +IAL HP+++F I D E + + + + +G L V+ ++
Sbjct: 173 IVQKIALSHPEIAFTLIRDHRRE---FHAAGDGTLYSAIYAVYGRSFAQDLLPVSYSENG 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ + GY+ P + + ++ Q +IN RYV + S ++++ + G
Sbjct: 230 ISLEGYVIKPLYAKNNRSLQTFFINGRYV---------KSVTCSVALEEAYR--TLVMTG 278
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
K PA +L L P D+ P K V F D + V + + +++A M+
Sbjct: 279 K------FPACVLMLTVPPETVDVNVHPAKAAVRFTDEKRVSSAVFFGVKNALMQ 327
Score = 41.6 bits (96), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 33/212 (15%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
+V+ + +I AG +L +ID+HAA ER+ E+ R + + + + L++ EL+L
Sbjct: 473 RVIGEAFTNYILAQAGDSLYIIDKHAAHERVLFEQFRDASRTPDSQMI--LNS-SELLLS 529
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHT------QGSRSFNKNLNLLQRQITVITLLAVPCIF 1280
+ LQ E +K G+ + +LNL + ++ LA +
Sbjct: 530 VAEFDALQANQEALKQRGFAFDFSNPPYVAVCAVPVVCASLNLDE----LVLELAENLVL 585
Query: 1281 GVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEEL 1340
G Q LA T L++ AC+ AI GD SE + EE+
Sbjct: 586 GK-----------QDLASTQLEDA--------LHTMACKAAIRAGDKNDLSELQALAEEV 626
Query: 1341 KQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1372
C HGRP L E + KQ ++
Sbjct: 627 FGNERIRHCPHGRPVLFELTRHE-IEKQFKRV 657
>gi|417848825|ref|ZP_12494757.1| DNA mismatch repair protein [Streptococcus mitis SK1080]
gi|339457573|gb|EGP70140.1| DNA mismatch repair protein [Streptococcus mitis SK1080]
Length = 649
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 170/353 (48%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SK P ++++ L D+ P K V + ++ + AI ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAISNSL 326
>gi|30021860|ref|NP_833491.1| DNA mismatch repair protein [Bacillus cereus ATCC 14579]
gi|218231496|ref|YP_002368571.1| DNA mismatch repair protein [Bacillus cereus B4264]
gi|228959975|ref|ZP_04121640.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229047451|ref|ZP_04193043.1| DNA mismatch repair protein mutL [Bacillus cereus AH676]
gi|229111241|ref|ZP_04240795.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-15]
gi|229129045|ref|ZP_04258018.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-Cer4]
gi|229146340|ref|ZP_04274711.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST24]
gi|296504267|ref|YP_003665967.1| DNA mismatch repair protein [Bacillus thuringiensis BMB171]
gi|423385273|ref|ZP_17362529.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1X1-2]
gi|423412427|ref|ZP_17389547.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3O-2]
gi|423431788|ref|ZP_17408792.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4O-1]
gi|423528370|ref|ZP_17504815.1| DNA mismatch repair protein mutL [Bacillus cereus HuB1-1]
gi|423585821|ref|ZP_17561908.1| DNA mismatch repair protein mutL [Bacillus cereus VD045]
gi|423628849|ref|ZP_17604598.1| DNA mismatch repair protein mutL [Bacillus cereus VD154]
gi|423641149|ref|ZP_17616767.1| DNA mismatch repair protein mutL [Bacillus cereus VD166]
gi|423649633|ref|ZP_17625203.1| DNA mismatch repair protein mutL [Bacillus cereus VD169]
gi|81837324|sp|Q81A26.1|MUTL_BACCR RecName: Full=DNA mismatch repair protein MutL
gi|226723028|sp|B7HDP3.1|MUTL_BACC4 RecName: Full=DNA mismatch repair protein MutL
gi|29897416|gb|AAP10692.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 14579]
gi|218159453|gb|ACK59445.1| DNA mismatch repair protein MutL [Bacillus cereus B4264]
gi|228636973|gb|EEK93432.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST24]
gi|228654282|gb|EEL10147.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-Cer4]
gi|228672235|gb|EEL27525.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-15]
gi|228723895|gb|EEL75248.1| DNA mismatch repair protein mutL [Bacillus cereus AH676]
gi|228799718|gb|EEM46670.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|296325319|gb|ADH08247.1| DNA mismatch repair protein [Bacillus thuringiensis BMB171]
gi|401104495|gb|EJQ12472.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3O-2]
gi|401116544|gb|EJQ24382.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4O-1]
gi|401233167|gb|EJR39663.1| DNA mismatch repair protein mutL [Bacillus cereus VD045]
gi|401268394|gb|EJR74442.1| DNA mismatch repair protein mutL [Bacillus cereus VD154]
gi|401280210|gb|EJR86132.1| DNA mismatch repair protein mutL [Bacillus cereus VD166]
gi|401282913|gb|EJR88810.1| DNA mismatch repair protein mutL [Bacillus cereus VD169]
gi|401635329|gb|EJS53084.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1X1-2]
gi|402452033|gb|EJV83852.1| DNA mismatch repair protein mutL [Bacillus cereus HuB1-1]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|365159456|ref|ZP_09355636.1| DNA mismatch repair protein mutL [Bacillus sp. 7_6_55CFAA_CT2]
gi|363625168|gb|EHL76213.1| DNA mismatch repair protein mutL [Bacillus sp. 7_6_55CFAA_CT2]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGEIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|418016943|ref|ZP_12656502.1| DNA mismatch repair protein (MutL family) [Streptococcus salivarius
M18]
gi|345527636|gb|EGX30944.1| DNA mismatch repair protein (MutL family) [Streptococcus salivarius
M18]
Length = 645
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 178/353 (50%), Gaps = 38/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A G
Sbjct: 61 GEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAADG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + V KG + E +D VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 EAYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD G
Sbjct: 227 SDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD---------G 271
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
+ G + P +++++ L D+ P K V + ++A I AI
Sbjct: 272 Y--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|229092806|ref|ZP_04223944.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-42]
gi|228690604|gb|EEL44385.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-42]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|289168758|ref|YP_003447027.1| DNA mismatch repair protein hexB [Streptococcus mitis B6]
gi|288908325|emb|CBJ23167.1| DNA mismatch repair protein hexB [Streptococcus mitis B6]
Length = 649
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 200/435 (45%), Gaps = 42/435 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+ D LE+ +R + Q+ L + L + E R + E
Sbjct: 330 TLIPDALENLAKSTVRNREKVEQTILPLKENTL--------YYEQTEANRSSQAEVADYQ 381
Query: 418 VELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 382 VELTDEGQDLTLFAK 396
>gi|229104332|ref|ZP_04235001.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-28]
gi|228679030|gb|EEL33238.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-28]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDVIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|118478989|ref|YP_896140.1| DNA mismatch repair protein [Bacillus thuringiensis str. Al Hakam]
gi|166231104|sp|A0RHE0.1|MUTL_BACAH RecName: Full=DNA mismatch repair protein MutL
gi|118418214|gb|ABK86633.1| DNA mismatch repair protein MutL [Bacillus thuringiensis str. Al
Hakam]
Length = 647
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|342162981|ref|YP_004767620.1| DNA mismatch repair protein [Streptococcus pseudopneumoniae IS7493]
gi|383938860|ref|ZP_09992057.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus pseudopneumoniae SK674]
gi|418969224|ref|ZP_13520362.1| DNA mismatch repair protein [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|341932863|gb|AEL09760.1| DNA mismatch repair protein [Streptococcus pseudopneumoniae IS7493]
gi|383352308|gb|EID30024.1| DNA mismatch repair protein [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383714201|gb|EID70210.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus pseudopneumoniae SK674]
Length = 649
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVEG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVVHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAITNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|228940846|ref|ZP_04103406.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228973767|ref|ZP_04134344.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980322|ref|ZP_04140633.1| DNA mismatch repair protein mutL [Bacillus thuringiensis Bt407]
gi|384187772|ref|YP_005573668.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676089|ref|YP_006928460.1| DNA mismatch repair protein MutL [Bacillus thuringiensis Bt407]
gi|452200150|ref|YP_007480231.1| DNA mismatch repair protein MutL [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228779427|gb|EEM27683.1| DNA mismatch repair protein mutL [Bacillus thuringiensis Bt407]
gi|228785919|gb|EEM33921.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818860|gb|EEM64925.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326941481|gb|AEA17377.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409175218|gb|AFV19523.1| DNA mismatch repair protein MutL [Bacillus thuringiensis Bt407]
gi|452105543|gb|AGG02483.1| DNA mismatch repair protein MutL [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|206972646|ref|ZP_03233588.1| DNA mismatch repair protein MutL [Bacillus cereus AH1134]
gi|206732459|gb|EDZ49639.1| DNA mismatch repair protein MutL [Bacillus cereus AH1134]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229123282|ref|ZP_04252486.1| DNA mismatch repair protein mutL [Bacillus cereus 95/8201]
gi|228660058|gb|EEL15694.1| DNA mismatch repair protein mutL [Bacillus cereus 95/8201]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|196038472|ref|ZP_03105781.1| DNA mismatch repair protein MutL [Bacillus cereus NVH0597-99]
gi|228986912|ref|ZP_04147039.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229197879|ref|ZP_04324595.1| DNA mismatch repair protein mutL [Bacillus cereus m1293]
gi|423574625|ref|ZP_17550744.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-D12]
gi|196030880|gb|EDX69478.1| DNA mismatch repair protein MutL [Bacillus cereus NVH0597-99]
gi|228585597|gb|EEK43699.1| DNA mismatch repair protein mutL [Bacillus cereus m1293]
gi|228772861|gb|EEM21300.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|401212150|gb|EJR18896.1| DNA mismatch repair protein mutL [Bacillus cereus MSX-D12]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|196034149|ref|ZP_03101559.1| DNA mismatch repair protein MutL [Bacillus cereus W]
gi|228916406|ref|ZP_04079973.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228947489|ref|ZP_04109779.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|195993223|gb|EDX57181.1| DNA mismatch repair protein MutL [Bacillus cereus W]
gi|228812009|gb|EEM58340.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228843209|gb|EEM88290.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|116627019|ref|YP_819638.1| DNA mismatch repair protein [Streptococcus thermophilus LMD-9]
gi|122268376|sp|Q03MY0.1|MUTL_STRTD RecName: Full=DNA mismatch repair protein MutL
gi|116100296|gb|ABJ65442.1| DNA mismatch repair protein MutL [Streptococcus thermophilus LMD-9]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 199/402 (49%), Gaps = 55/402 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V G+ +++
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSK--IQIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 59 DNGEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAA 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKV 172
G G + V KG + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 116 DGEVYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAEL 168
Query: 173 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEV 231
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E+
Sbjct: 169 AHIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEI 224
Query: 232 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 291
+ +D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 225 SNSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD-------- 270
Query: 292 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
G+ G + P +++++ L D+ P K V + ++A I+ AI +
Sbjct: 271 -GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALIKSAIAQSLR 327
Query: 352 KKIAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 391
++ D++ DA L S+R + T L PLK
Sbjct: 328 EQ--------DLIPDALENLAKSSTRGATRSVQTSL---PLK 358
>gi|228935065|ref|ZP_04097895.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824635|gb|EEM70437.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|423374435|ref|ZP_17351773.1| DNA mismatch repair protein mutL [Bacillus cereus AND1407]
gi|401094347|gb|EJQ02429.1| DNA mismatch repair protein mutL [Bacillus cereus AND1407]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|228954045|ref|ZP_04116074.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229071265|ref|ZP_04204489.1| DNA mismatch repair protein mutL [Bacillus cereus F65185]
gi|229081020|ref|ZP_04213533.1| DNA mismatch repair protein mutL [Bacillus cereus Rock4-2]
gi|423425906|ref|ZP_17402937.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3X2-2]
gi|423437223|ref|ZP_17414204.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4X12-1]
gi|423503553|ref|ZP_17480145.1| DNA mismatch repair protein mutL [Bacillus cereus HD73]
gi|449090712|ref|YP_007423153.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228702334|gb|EEL54807.1| DNA mismatch repair protein mutL [Bacillus cereus Rock4-2]
gi|228711886|gb|EEL63837.1| DNA mismatch repair protein mutL [Bacillus cereus F65185]
gi|228805611|gb|EEM52201.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|401110653|gb|EJQ18552.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3X2-2]
gi|401120378|gb|EJQ28174.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4X12-1]
gi|402458907|gb|EJV90647.1| DNA mismatch repair protein mutL [Bacillus cereus HD73]
gi|449024469|gb|AGE79632.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|222097214|ref|YP_002531271.1| DNA mismatch repair protein [Bacillus cereus Q1]
gi|254766159|sp|B9IV58.1|MUTL_BACCQ RecName: Full=DNA mismatch repair protein MutL
gi|221241272|gb|ACM13982.1| DNA mismatch repair protein MutL [Bacillus cereus Q1]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|42782852|ref|NP_980099.1| DNA mismatch repair protein [Bacillus cereus ATCC 10987]
gi|81830999|sp|Q732V8.1|MUTL_BACC1 RecName: Full=DNA mismatch repair protein MutL
gi|42738779|gb|AAS42707.1| DNA mismatch repair protein MutL [Bacillus cereus ATCC 10987]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|402556109|ref|YP_006597380.1| DNA mismatch repair protein [Bacillus cereus FRI-35]
gi|401797319|gb|AFQ11178.1| DNA mismatch repair protein [Bacillus cereus FRI-35]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|220932003|ref|YP_002508911.1| DNA mismatch repair protein MutL [Halothermothrix orenii H 168]
gi|254766169|sp|B8CX97.1|MUTL_HALOH RecName: Full=DNA mismatch repair protein MutL
gi|219993313|gb|ACL69916.1| DNA mismatch repair protein MutL [Halothermothrix orenii H 168]
Length = 644
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 176/349 (50%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I RLPE+V N + +G V+ VV+ELV NS+DAG+ K+ + + ++V D+
Sbjct: 1 MPEIKRLPESVANQISAGEVVERPASVVKELVENSLDAGSNKILIEIENGGKDLIRVKDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI D + + +R+ATSK+ D++D + + GFRGEALASI+ VS+L+II++
Sbjct: 61 GHGIPSDEIEIAFDRYATSKI---TDINDLYSLKSLGFRGEALASIASVSILDIISRTKS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDE--RKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
+ + +KG K I E VGT ++ +DLF+N P R KY++++ + H +
Sbjct: 118 QTKAIKMRLKGGKV----ISKEPCGASVGTDIIVKDLFFNTPARYKYLKTTRNEFKH-IS 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R AL +P V+F I + +L T + L + + +G E L +++ D
Sbjct: 173 NIITREALAYPGVNFTLI--HNGRIVLKTPGTGKTLDCIYAIYGKEMAQSLVKIDYEDRY 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+++SGYIS P ++++ ++N R V + +LN +A G L
Sbjct: 231 IKVSGYISRPDYYRYNRSYEIFFVNKRAVH----NSILNR--------GVEEAYQGLL-- 276
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A P LNL+ L D+ P K V F + + I+ I
Sbjct: 277 ---PPGAYPVVFLNLKLNPILVDVNVHPTKKEVKFSRDKVIKEVIQNGI 322
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 111/268 (41%), Gaps = 31/268 (11%)
Query: 1095 LCPHAHLGAQAEGTSIISGTKWR--NGHPQTT--NNNISCDIHNQDNILDISSGLLHLTG 1150
L P G ++ S +S K+ N + T N+N D H + + ++I
Sbjct: 389 LLPSKKNGFYSKKNSQVSQNKFMDINNKLEKTEINDNYKKDKHYKTDSINIKDN------ 442
Query: 1151 EFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGE 1210
I ++ NK + +VL Q+ +I L +IDQH A ERI + K + E
Sbjct: 443 --SIKENKNKMDIPIKRVLGQIKNTYIIAEGRDGLYIIDQHNAHERILYQSFIEKYNNSE 500
Query: 1211 GKSVA-YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQIT 1269
S + E PE ++L+++ Q++ G+ + G SF
Sbjct: 501 IVSQPLVVPVNIETTAPEA--EVLKSYLPQLEKMGFKLEVF--GINSF------------ 544
Query: 1270 VITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLL 1329
+ VP + + + E + +L + D + + +++ +CRGAI G+ L
Sbjct: 545 --IVREVPSLIKKRSNKRVVREVIDKLLEHDKAMKPSELINEIISYMSCRGAIKAGEYLD 602
Query: 1330 PSECALIVEELKQTSLCFQCAHGRPTTV 1357
E I+E L +T ++C HGRP +
Sbjct: 603 KKEAEQIIEGLFKTDNPYRCPHGRPIII 630
>gi|229018964|ref|ZP_04175806.1| DNA mismatch repair protein mutL [Bacillus cereus AH1273]
gi|229025207|ref|ZP_04181631.1| DNA mismatch repair protein mutL [Bacillus cereus AH1272]
gi|228736140|gb|EEL86711.1| DNA mismatch repair protein mutL [Bacillus cereus AH1272]
gi|228742292|gb|EEL92450.1| DNA mismatch repair protein mutL [Bacillus cereus AH1273]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLMIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>gi|423458049|ref|ZP_17434846.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5X2-1]
gi|401148433|gb|EJQ55926.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5X2-1]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLMIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>gi|229186007|ref|ZP_04313177.1| DNA mismatch repair protein mutL [Bacillus cereus BGSC 6E1]
gi|228597426|gb|EEK55076.1| DNA mismatch repair protein mutL [Bacillus cereus BGSC 6E1]
Length = 647
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|196044440|ref|ZP_03111675.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB108]
gi|225865749|ref|YP_002751127.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB102]
gi|376267661|ref|YP_005120373.1| DNA mismatch repair protein MutL [Bacillus cereus F837/76]
gi|254766158|sp|C1ENZ2.1|MUTL_BACC3 RecName: Full=DNA mismatch repair protein MutL
gi|196024475|gb|EDX63147.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB108]
gi|225787379|gb|ACO27596.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB102]
gi|364513461|gb|AEW56860.1| DNA mismatch repair protein MutL [Bacillus cereus F837/76]
Length = 647
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|386085766|ref|YP_006001640.1| DNA mismatch repair protein mutL [Streptococcus thermophilus ND03]
gi|386343658|ref|YP_006039822.1| DNA mismatch repair protein [Streptococcus thermophilus JIM 8232]
gi|387908861|ref|YP_006339167.1| DNA mismatch repair protein mutL [Streptococcus thermophilus
MN-ZLW-002]
gi|312277479|gb|ADQ62136.1| DNA mismatch repair protein mutL [Streptococcus thermophilus ND03]
gi|339277119|emb|CCC18867.1| DNA mismatch repair protein [Streptococcus thermophilus JIM 8232]
gi|387573796|gb|AFJ82502.1| DNA mismatch repair protein mutL [Streptococcus thermophilus
MN-ZLW-002]
Length = 647
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 197/400 (49%), Gaps = 51/400 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A G
Sbjct: 61 GEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAADG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + V KG + E +D VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 EVYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD G
Sbjct: 227 SDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD---------G 271
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ G + P +++++ L D+ P K V + ++A I+ AI + ++
Sbjct: 272 Y--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALIKSAIAQSLREQ 329
Query: 354 IAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 391
D++ DA L S+R + T L PLK
Sbjct: 330 --------DLIPDALENLAKSSTRGATRSVQTSL---PLK 358
>gi|390955216|ref|YP_006418974.1| DNA mismatch repair protein MutL [Aequorivita sublithincola DSM
14238]
gi|390421202|gb|AFL81959.1| DNA mismatch repair protein MutL [Aequorivita sublithincola DSM
14238]
Length = 614
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 209/447 (46%), Gaps = 31/447 (6%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DA AT + V V+V D+GSG
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAKATSITLVIKDAGKTLVQVTDNGSG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSVTDARLSFERHATSKI---KSAEDLFNLHTKGFRGEALASIAAIAHVELKTKTENSEI 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++GSK + D GTT+ ++LFYN P RR +++S+P + H + + R
Sbjct: 122 GTHLTIEGSKV--ISQDPAVVPKGTTISVKNLFYNIPARRNFLKSNPVETRHIIDEF-HR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP V+F+ + S+ + SS+ +++ FG + L V+ L+I G
Sbjct: 179 VALAHPSVAFQMLHNGSD---VFNLPSSNSRQRIVNIFGSKTNEKLVPVSEETEILKIEG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + Q+ ++N R++ K P L+H AS A G + KS
Sbjct: 236 FVLKPEFGKKSRGEQFFFVNDRFI-KSP---YLHHAVAS--------AFEGLV-----KS 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y L L D+ P KT + F D + A + ++ + + D +
Sbjct: 279 DIHPGYFLFLEVDTHSIDINIHPTKTEIKFDDEHSIYAMLRATVKHSLGQFNIAPVLDFE 338
Query: 363 MLEDAELPLESSRFQSHQSSTHLHS--SPLKNLAKQRDHMFHKECERITFQEFQKDPVEL 420
+ + P E S+ Q S + S +P K +KQ + F + E T ++ V L
Sbjct: 339 RDKGFDTPYEYSKKQPTSPSIEVDSDFNPFKEKSKQGNINFPFKRENTT--SWESLYVGL 396
Query: 421 AEENTEMEFFSQPKHSSSLLDGSFAEC 447
+ENT + + S + GS E
Sbjct: 397 KDENTVVSNIGDIEFESEEVTGSLFES 423
>gi|228922483|ref|ZP_04085785.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423581979|ref|ZP_17558090.1| DNA mismatch repair protein mutL [Bacillus cereus VD014]
gi|423635459|ref|ZP_17611112.1| DNA mismatch repair protein mutL [Bacillus cereus VD156]
gi|228837197|gb|EEM82536.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401212858|gb|EJR19599.1| DNA mismatch repair protein mutL [Bacillus cereus VD014]
gi|401278210|gb|EJR84146.1| DNA mismatch repair protein mutL [Bacillus cereus VD156]
Length = 647
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229180045|ref|ZP_04307389.1| DNA mismatch repair protein mutL [Bacillus cereus 172560W]
gi|228603254|gb|EEK60731.1| DNA mismatch repair protein mutL [Bacillus cereus 172560W]
Length = 647
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229098237|ref|ZP_04229184.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-29]
gi|229117254|ref|ZP_04246632.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-3]
gi|423378446|ref|ZP_17355730.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1O-2]
gi|423441502|ref|ZP_17418408.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4X2-1]
gi|423448272|ref|ZP_17425151.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5O-1]
gi|423464576|ref|ZP_17441344.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6O-1]
gi|423533918|ref|ZP_17510336.1| DNA mismatch repair protein mutL [Bacillus cereus HuB2-9]
gi|423540813|ref|ZP_17517204.1| DNA mismatch repair protein mutL [Bacillus cereus HuB4-10]
gi|423547052|ref|ZP_17523410.1| DNA mismatch repair protein mutL [Bacillus cereus HuB5-5]
gi|423623157|ref|ZP_17598935.1| DNA mismatch repair protein mutL [Bacillus cereus VD148]
gi|228666154|gb|EEL21618.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-3]
gi|228685135|gb|EEL39066.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-29]
gi|401128866|gb|EJQ36549.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5O-1]
gi|401172001|gb|EJQ79222.1| DNA mismatch repair protein mutL [Bacillus cereus HuB4-10]
gi|401178773|gb|EJQ85946.1| DNA mismatch repair protein mutL [Bacillus cereus HuB5-5]
gi|401259930|gb|EJR66104.1| DNA mismatch repair protein mutL [Bacillus cereus VD148]
gi|401635213|gb|EJS52969.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1O-2]
gi|402418163|gb|EJV50463.1| DNA mismatch repair protein mutL [Bacillus cereus BAG4X2-1]
gi|402420843|gb|EJV53114.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6O-1]
gi|402464137|gb|EJV95837.1| DNA mismatch repair protein mutL [Bacillus cereus HuB2-9]
Length = 647
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229151969|ref|ZP_04280165.1| DNA mismatch repair protein mutL [Bacillus cereus m1550]
gi|228631524|gb|EEK88157.1| DNA mismatch repair protein mutL [Bacillus cereus m1550]
Length = 647
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|417923461|ref|ZP_12566925.1| DNA mismatch repair protein [Streptococcus mitis SK569]
gi|342836846|gb|EGU71050.1| DNA mismatch repair protein [Streptococcus mitis SK569]
Length = 649
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 168/349 (48%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGITHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVEG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
SK P ++++ L D+ P K V + ++ + AI
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAI 322
>gi|404485713|ref|ZP_11020910.1| DNA mismatch repair protein MutL [Barnesiella intestinihominis YIT
11860]
gi|404338401|gb|EJZ64848.1| DNA mismatch repair protein MutL [Barnesiella intestinihominis YIT
11860]
Length = 627
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 179/372 (48%), Gaps = 35/372 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N+VDAGAT + + ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAVDAGATSIQIILKDAGRTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERH+TSK + DD + T GFRGEALASI+ +S +E+ T+
Sbjct: 65 MSPTDARLAFERHSTSK---IRSADDLFSLRTMGFRGEALASIAAISQVELRTRRVDDEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G M S+C G + VG+ +++F+N P RRK+++S+ + L ++ R
Sbjct: 122 GTCIRMSASQC--EGQEAISTPVGSNFAVKNIFFNVPARRKFLKSNQVE-LSNILNEFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL++ ++SF + +SE L +++ +++ FG L + ++ISG
Sbjct: 179 MALINTQISFILVHNDSE---LYNLPATNLRQRIVALFGKSLNQQLLSLGTETSLVKISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLN----HLAASFDCSDSWKANNGFLKGK 298
Y+ P + A QY ++N RY+ HK + HL +
Sbjct: 236 YVGRPEAARKRGALQYFFVNGRYMRHPYFHKAVTICYEHLIPVGE--------------- 280
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
P Y +NL D+ P KT + F++ +P+ + +++ A K S
Sbjct: 281 ------MPNYFINLTVDPETIDVNIHPTKTEIKFENEQPIWQILSASVKEALGKFSTAPS 334
Query: 359 FDVDMLEDAELP 370
D DM + E+P
Sbjct: 335 IDFDMEDAPEIP 346
>gi|55820157|ref|YP_138599.1| DNA mismatch repair protein [Streptococcus thermophilus LMG 18311]
gi|55822045|ref|YP_140486.1| DNA mismatch repair protein [Streptococcus thermophilus CNRZ1066]
gi|81559962|sp|Q5M1Y6.1|MUTL_STRT1 RecName: Full=DNA mismatch repair protein MutL
gi|81561138|sp|Q5M6H7.1|MUTL_STRT2 RecName: Full=DNA mismatch repair protein MutL
gi|55736142|gb|AAV59784.1| DNA mismatch repair protein [Streptococcus thermophilus LMG 18311]
gi|55738030|gb|AAV61671.1| DNA mismatch repair protein [Streptococcus thermophilus CNRZ1066]
Length = 647
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 199/402 (49%), Gaps = 55/402 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V G+ +++
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSK--IQIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 59 DNGEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAA 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKV 172
G G + V KG + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 116 DGEVYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAEL 168
Query: 173 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEV 231
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E+
Sbjct: 169 AHIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEI 224
Query: 232 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 291
+ +D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 225 SNSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD-------- 270
Query: 292 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
G+ G + P +++++ L D+ P K V + ++A I+ AI +
Sbjct: 271 -GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALIKSAIAQSLR 327
Query: 352 KKIAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 391
++ D++ DA L S+R + T L PLK
Sbjct: 328 EQ--------DLIPDALENLAKSSTRGATRSVQTSL---PLK 358
>gi|423389971|ref|ZP_17367197.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1X1-3]
gi|401640887|gb|EJS58613.1| DNA mismatch repair protein mutL [Bacillus cereus BAG1X1-3]
Length = 647
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLMIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>gi|423483359|ref|ZP_17460049.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6X1-2]
gi|401140910|gb|EJQ48465.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6X1-2]
Length = 647
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L + + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNYTLMKAVQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE+ ++ A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLQLIEKTLQDAFKK 327
>gi|229061371|ref|ZP_04198717.1| DNA mismatch repair protein mutL [Bacillus cereus AH603]
gi|228717910|gb|EEL69556.1| DNA mismatch repair protein mutL [Bacillus cereus AH603]
Length = 647
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIRQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|419767605|ref|ZP_14293755.1| DNA mismatch repair protein, C-terminal domain / MutL C-terminal
dimerization domain multi-domain protein [Streptococcus
mitis SK579]
gi|383352969|gb|EID30599.1| DNA mismatch repair protein, C-terminal domain / MutL C-terminal
dimerization domain multi-domain protein [Streptococcus
mitis SK579]
Length = 649
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 168/349 (48%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ V + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIVEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
SK P ++++ L D+ P K V + ++ + AI
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAI 322
>gi|229031398|ref|ZP_04187399.1| DNA mismatch repair protein mutL [Bacillus cereus AH1271]
gi|228729893|gb|EEL80872.1| DNA mismatch repair protein mutL [Bacillus cereus AH1271]
Length = 647
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|421208064|ref|ZP_15665089.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070005]
gi|421219426|ref|ZP_15676288.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070425]
gi|421224058|ref|ZP_15680804.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070768]
gi|421297639|ref|ZP_15748335.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA60080]
gi|395576534|gb|EJG37088.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070005]
gi|395591226|gb|EJG51522.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070425]
gi|395591394|gb|EJG51689.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070768]
gi|395905010|gb|EJH15919.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA60080]
Length = 649
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GIS D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GYGISHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|418087979|ref|ZP_12725144.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47033]
gi|418201491|ref|ZP_12837923.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA52306]
gi|419454599|ref|ZP_13994562.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP04]
gi|421284758|ref|ZP_15735536.1| DNA mismatch repair protein mutL 3 [Streptococcus pneumoniae
GA60190]
gi|133950292|gb|ABO44018.1| MutL [Streptococcus pneumoniae]
gi|353755656|gb|EHD36259.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47033]
gi|353868967|gb|EHE48850.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA52306]
gi|379631040|gb|EHZ95620.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP04]
gi|395888678|gb|EJG99689.1| DNA mismatch repair protein mutL 3 [Streptococcus pneumoniae
GA60190]
Length = 649
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|407706173|ref|YP_006829758.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Bacillus
thuringiensis MC28]
gi|407383858|gb|AFU14359.1| DNA mismatch repair protein mutL [Bacillus thuringiensis MC28]
Length = 647
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|423418323|ref|ZP_17395412.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3X2-1]
gi|401106596|gb|EJQ14557.1| DNA mismatch repair protein mutL [Bacillus cereus BAG3X2-1]
Length = 647
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLMIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>gi|307126400|ref|YP_003878431.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae 670-6B]
gi|418111522|ref|ZP_12748527.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41538]
gi|418131589|ref|ZP_12768466.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11304]
gi|418154231|ref|ZP_12790962.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16242]
gi|418224634|ref|ZP_12851264.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP112]
gi|419465827|ref|ZP_14005713.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05248]
gi|419476838|ref|ZP_14016664.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA18068]
gi|419511633|ref|ZP_14051267.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05578]
gi|419515903|ref|ZP_14055521.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02506]
gi|421282420|ref|ZP_15733210.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA04216]
gi|133950174|gb|ABO44014.1| MutL [Streptococcus pneumoniae]
gi|183393274|gb|ACC61797.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|306483462|gb|ADM90331.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae 670-6B]
gi|353786579|gb|EHD66990.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41538]
gi|353809057|gb|EHD89319.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11304]
gi|353822523|gb|EHE02698.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16242]
gi|353883278|gb|EHE63086.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP112]
gi|379547399|gb|EHZ12536.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05248]
gi|379567637|gb|EHZ32620.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA18068]
gi|379636103|gb|EIA00661.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05578]
gi|379639906|gb|EIA04445.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02506]
gi|395884390|gb|EJG95428.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA04216]
Length = 649
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|257876211|ref|ZP_05655864.1| DNA mismatch repair protein [Enterococcus casseliflavus EC20]
gi|257810377|gb|EEV39197.1| DNA mismatch repair protein [Enterococcus casseliflavus EC20]
Length = 702
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 170/353 (48%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I L E + N + +G V+ VV+ELV N+VDAG+T++ +++ ++V+D+
Sbjct: 1 MGKIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ +RHATSK + + DD I T GFRGEAL SI+ VS+L I T G
Sbjct: 61 GEGIAEEDVLTAFKRHATSK---IHNRDDLFRIRTLGFRGEALPSIASVSILSIETAVKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G +KG + R+ GT + +LFYN P R KY+++ + L ++
Sbjct: 118 AQQGSFVRLKGGAVEEHLPANLRQ--GTKITVENLFYNTPARLKYVKTLQTE-LANIGDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIAL HP+V+F+ + +++L T S + +G+E + ++ D +
Sbjct: 175 VNRIALSHPEVAFRLV--HEGNKMLSTTGSGQLKQTIAGIYGVETAKKMIAIDTEDLDFK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + + + + IN RY+ ++ N + G
Sbjct: 233 VTGFVSLPEVTRASRNYLSTIINGRYI-------------------RNFALNKAIVAGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SK P +L ++ L D+ P K V E + I +AI A
Sbjct: 274 SKLMVGRFPLAVLEIKMDPLLVDVNVHPTKQEVRLSKEEELTKLISKAINEAL 326
>gi|417675960|ref|ZP_12325373.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17545]
gi|332076625|gb|EGI87087.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17545]
Length = 649
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 168/349 (48%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
SK P ++++ L D+ P K V + ++ + AI
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAI 322
>gi|319940113|ref|ZP_08014467.1| DNA mismatch repair protein mutL [Streptococcus anginosus 1_2_62CV]
gi|319810827|gb|EFW07154.1| DNA mismatch repair protein mutL [Streptococcus anginosus 1_2_62CV]
Length = 648
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 170/353 (48%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+EL+ NS+DAGAT++ V + ++V+D+
Sbjct: 1 MSKIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLRSIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEAL SI+ VS L I T
Sbjct: 61 GEGIEHEEVSLALRRHATSKIKKQADL---FRIRTLGFRGEALPSIASVSRLTIETATSS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + +G + L + GT + DLF+N P R KYM+S ++ H V
Sbjct: 118 GAHGTLLIAQGGEVETL--EPSSCPRGTKIKVEDLFFNTPARLKYMKSQQAELSHIV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP+V+F ++ E+ T + + + +G+ + E+ A+D E
Sbjct: 175 INRLSLAHPEVAFTLVN--DGKEMTRTAGTGNLRQAIAGIYGLTTAKKMIEILASDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 233 VSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SK P ++++R L D+ P K V ++ I +AI ++
Sbjct: 274 SKLMVGRFPIAVIDIRIDPYLADVNVHPTKQEVRISKERELMVLISQAIAASL 326
>gi|325567291|ref|ZP_08143958.1| DNA mismatch repair protein HexB [Enterococcus casseliflavus ATCC
12755]
gi|325158724|gb|EGC70870.1| DNA mismatch repair protein HexB [Enterococcus casseliflavus ATCC
12755]
Length = 702
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 170/353 (48%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I L E + N + +G V+ VV+ELV N+VDAG+T++ +++ ++V+D+
Sbjct: 1 MGKIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ +RHATSK + + DD I T GFRGEAL SI+ VS+L I T G
Sbjct: 61 GEGIAEEDVLTAFKRHATSK---IHNRDDLFRIRTLGFRGEALPSIASVSILSIETAVKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G +KG + R+ GT + +LFYN P R KY+++ + L ++
Sbjct: 118 AQQGSFVRLKGGAVEEHLPANLRQ--GTKITVENLFYNTPARLKYVKTLQTE-LANIGDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIAL HP+V+F+ + +++L T S + +G+E + ++ D +
Sbjct: 175 VNRIALSHPEVAFRLV--HEGNKMLSTTGSGQLKQTIAGIYGVETAKKMIAIDTEDLDFK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + + + + IN RY+ ++ N + G
Sbjct: 233 VTGFVSLPEVTRASRNYLSTIINGRYI-------------------RNFALNKAIVAGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SK P +L ++ L D+ P K V E + I +AI A
Sbjct: 274 SKLMVGRFPLAVLEIKMDPLLVDVNVHPTKQEVRLSKEEELTKLISKAINEAL 326
>gi|418967875|ref|ZP_13519509.1| DNA mismatch repair protein [Streptococcus mitis SK616]
gi|383342001|gb|EID20242.1| DNA mismatch repair protein [Streptococcus mitis SK616]
Length = 649
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 168/349 (48%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
SK P ++++ L D+ P K V + ++ + AI
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAI 322
>gi|417916550|ref|ZP_12560127.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus mitis bv. 2 str. SK95]
gi|342829441|gb|EGU63795.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus mitis bv. 2 str. SK95]
Length = 649
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 205/437 (46%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSTLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + I VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEIIPATSPVGTKVCVADLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + + +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIAIGNSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E + + E
Sbjct: 330 ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSKPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL EE ++ F++
Sbjct: 380 HQVELTEEGRDLTLFAK 396
>gi|167635859|ref|ZP_02394168.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0442]
gi|170687873|ref|ZP_02879087.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0465]
gi|254683523|ref|ZP_05147383.1| DNA mismatch repair protein [Bacillus anthracis str. CNEVA-9066]
gi|254722044|ref|ZP_05183833.1| DNA mismatch repair protein [Bacillus anthracis str. A1055]
gi|254739666|ref|ZP_05197360.1| DNA mismatch repair protein [Bacillus anthracis str. Kruger B]
gi|421639523|ref|ZP_16080114.1| DNA mismatch repair protein [Bacillus anthracis str. BF1]
gi|167528816|gb|EDR91574.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0442]
gi|170668189|gb|EDT18938.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0465]
gi|403393188|gb|EJY90433.1| DNA mismatch repair protein [Bacillus anthracis str. BF1]
Length = 627
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|30263774|ref|NP_846151.1| DNA mismatch repair protein [Bacillus anthracis str. Ames]
gi|47529193|ref|YP_020542.1| DNA mismatch repair protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186618|ref|YP_029870.1| DNA mismatch repair protein [Bacillus anthracis str. Sterne]
gi|65321094|ref|ZP_00394053.1| COG0323: DNA mismatch repair enzyme (predicted ATPase) [Bacillus
anthracis str. A2012]
gi|165872424|ref|ZP_02217059.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0488]
gi|167639830|ref|ZP_02398099.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0193]
gi|170706899|ref|ZP_02897357.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0389]
gi|177652043|ref|ZP_02934589.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0174]
gi|190568430|ref|ZP_03021337.1| DNA mismatch repair protein MutL [Bacillus anthracis str.
Tsiankovskii-I]
gi|227813324|ref|YP_002813333.1| DNA mismatch repair protein [Bacillus anthracis str. CDC 684]
gi|229604532|ref|YP_002868010.1| DNA mismatch repair protein [Bacillus anthracis str. A0248]
gi|254735808|ref|ZP_05193514.1| DNA mismatch repair protein [Bacillus anthracis str. Western North
America USA6153]
gi|254751062|ref|ZP_05203101.1| DNA mismatch repair protein [Bacillus anthracis str. Vollum]
gi|254759380|ref|ZP_05211405.1| DNA mismatch repair protein [Bacillus anthracis str. Australia 94]
gi|386737591|ref|YP_006210772.1| DNA mismatch repair protein mutL [Bacillus anthracis str. H9401]
gi|81837840|sp|Q81WR4.1|MUTL_BACAN RecName: Full=DNA mismatch repair protein MutL
gi|254766156|sp|C3P5H4.1|MUTL_BACAA RecName: Full=DNA mismatch repair protein MutL
gi|254766157|sp|C3L823.1|MUTL_BACAC RecName: Full=DNA mismatch repair protein MutL
gi|30258418|gb|AAP27637.1| DNA mismatch repair protein MutL [Bacillus anthracis str. Ames]
gi|47504341|gb|AAT33017.1| DNA mismatch repair protein MutL [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180545|gb|AAT55921.1| DNA mismatch repair protein MutL [Bacillus anthracis str. Sterne]
gi|164711862|gb|EDR17404.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0488]
gi|167512231|gb|EDR87608.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0193]
gi|170128317|gb|EDS97186.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0389]
gi|172082412|gb|EDT67477.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0174]
gi|190560434|gb|EDV14412.1| DNA mismatch repair protein MutL [Bacillus anthracis str.
Tsiankovskii-I]
gi|227007230|gb|ACP16973.1| DNA mismatch repair protein MutL [Bacillus anthracis str. CDC 684]
gi|229268940|gb|ACQ50577.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0248]
gi|384387443|gb|AFH85104.1| DNA mismatch repair protein mutL [Bacillus anthracis str. H9401]
Length = 626
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|47568272|ref|ZP_00238975.1| DNA mismatch repair protein HexB [Bacillus cereus G9241]
gi|47555100|gb|EAL13448.1| DNA mismatch repair protein HexB [Bacillus cereus G9241]
Length = 647
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 172/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE ++ A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQGAFKK 327
>gi|423522401|ref|ZP_17498874.1| DNA mismatch repair protein mutL [Bacillus cereus HuA4-10]
gi|401175095|gb|EJQ82298.1| DNA mismatch repair protein mutL [Bacillus cereus HuA4-10]
Length = 647
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIRQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229162703|ref|ZP_04290660.1| DNA mismatch repair protein mutL [Bacillus cereus R309803]
gi|228620585|gb|EEK77454.1| DNA mismatch repair protein mutL [Bacillus cereus R309803]
Length = 647
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLMIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|418161232|ref|ZP_12797923.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17328]
gi|353830822|gb|EHE10951.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17328]
Length = 649
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSRIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|419781929|ref|ZP_14307740.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK610]
gi|383183570|gb|EIC76105.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus oralis SK610]
Length = 649
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 169/353 (47%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + + +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIAIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SK P ++++ L D+ P K V ++A + AI ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAISNSL 326
>gi|421267412|ref|ZP_15718287.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR95]
gi|395872501|gb|EJG83599.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR95]
Length = 649
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|331091140|ref|ZP_08339982.1| hypothetical protein HMPREF9477_00625 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405362|gb|EGG84898.1| hypothetical protein HMPREF9477_00625 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 638
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 175/357 (49%), Gaps = 34/357 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ +V+ELV N++DA AT V V + ++++ D+
Sbjct: 1 MPNIQVLDQITIDKIAAGEVIERPASIVKELVENAIDANATAVTVEIKEGGISFIRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI ++ + L RH+TSK+ D+ + + GFRGEAL+SIS ++ +E+ITK
Sbjct: 61 GCGIPKEEVSLAFLRHSTSKIRSEKDL---ATVSSLGFRGEALSSISAIAQVEVITKTKE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVG----TTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
G + ++G G++ ++VG TT + +FYN P RRK++++ + H
Sbjct: 118 NDFGVKYTIEG------GVEKSIEEVGAPDGTTFLVHQIFYNTPARRKFLKTPMTEASH- 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
V + ++R+AL HP+VS +FI+ + L T + ++ FG E + L EVN ++
Sbjct: 171 VNELMVRLALSHPEVSIQFIN--NGQSKLHTAGNGKVKDVIYHVFGREIANNLLEVNRDE 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
G + +SGYI P S + ++ YIN RYV I K + F +
Sbjct: 229 GKMRVSGYIGKPLISRGNRNYENYYINGRYVKSNIIAKAIEDAYKDFTMQHKY------- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P +L+ + D+ P K + F + V F+ RA++ ++
Sbjct: 282 ----------PFTVLHFWLDGNDIDVNVHPTKMELRFSHRQEVYDFVYRAVKETLIE 328
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 35/221 (15%)
Query: 1152 FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEG 1211
FF + K +++ K++ QV + V L +IDQHAA ER+ E+ H +
Sbjct: 435 FFEEKLLTKKAVQEYKLIGQVFDTYWLVEFQEQLYIIDQHAAHERVLYEKTLHGMKD--- 491
Query: 1212 KSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVI 1271
+ F Q I N+ Q +R ++++L + I
Sbjct: 492 ----------------------RTFTSQYLSPPIILNLSMQEARLLTEHMDLFSKIGFEI 529
Query: 1272 --------TLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAI 1322
+ AVP +F + ++ L+E L L+D S+ P + + + +C+ A+
Sbjct: 530 ENFGGDSFAVRAVPDNLFSIAKKEL-LMEMLDNLSDDITSAEAPDLIGEKIAAMSCKAAV 588
Query: 1323 MFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
L +E ++ EL + + C HGRPT + + E
Sbjct: 589 KGNAKLSSAEVNALIGELLELENPYHCPHGRPTIIAMTKRE 629
>gi|423558668|ref|ZP_17534970.1| DNA mismatch repair protein mutL [Bacillus cereus MC67]
gi|401191936|gb|EJQ98958.1| DNA mismatch repair protein mutL [Bacillus cereus MC67]
Length = 647
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 172/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIRQEKTASRK--GTNITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE ++ A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQDAFKK 327
>gi|333374997|ref|ZP_08466826.1| DNA mismatch repair protein MutL [Kingella kingae ATCC 23330]
gi|381400681|ref|ZP_09925604.1| DNA mismatch repair protein [Kingella kingae PYKK081]
gi|332973074|gb|EGK11011.1| DNA mismatch repair protein MutL [Kingella kingae ATCC 23330]
gi|380834317|gb|EIC14162.1| DNA mismatch repair protein [Kingella kingae PYKK081]
Length = 624
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 178/339 (52%), Gaps = 27/339 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M +I +LP+ + N + +G V+ ++E++ NS+DAGAT++ + + G ++V D+
Sbjct: 1 MSSIIQLPDHLINQIAAGEVVERPANALKEILENSLDAGATQIQIDIAGGGIKLIRVCDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI + L L RHATSK+ L+D++ + + GFRGE LAS++ VS L + ++
Sbjct: 61 GSGIDAESLPLALSRHATSKIKTLSDLER---VRSMGFRGEGLASVASVSRLTLTSRPAT 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ + + +K ++ + VGTTV +LF+N P RRK+++S + H +
Sbjct: 118 QAHAAQ--IKAEDGVFQPVSAASHPVGTTVEVAELFFNTPARRKFLKSESTEYAHCL-TM 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL +P V+F +++ D+L+ + SP + G E + V++ +GAL+
Sbjct: 175 VERLALANPNVAFT---LKNNDKLIFAYPAQSPEQRVAQILGAEFHAASLPVSSENGALQ 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + QY ++N R+V K++ H +A L
Sbjct: 232 LNGFVSKPTFAKGKSDTQYFFVNQRFVRD----KVMLHAV--------KQAYRDVL---- 275
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV 338
+Q PA+ L L SL D+ P KT + F+D + V
Sbjct: 276 -HNQITPAFALFLTIDPSLVDVNIHPTKTEIRFRDSQAV 313
Score = 46.6 bits (109), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 39/193 (20%)
Query: 1185 LAVIDQHAADERIRLEELR--HKVLSGEGKSV------AYLDAEQELVLPEIGYQLLQNF 1236
L ++D HAA ERI E+L+ H + + + A AEQ V F
Sbjct: 454 LILVDMHAAAERINYEKLKTAHHANGIQAQMLLIPVVFAATHAEQAAV---------DEF 504
Query: 1237 AEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL--EFLQ 1294
+ ++++G L+L+ + I + VP + + SDV L E L+
Sbjct: 505 SHSLREYG----------------LDLVNAETGKIAVRTVPNML--SKSDVATLAREVLR 546
Query: 1295 QLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1354
L T S T +L++ AC G++ G L E ++ +++Q QC HGRP
Sbjct: 547 DLMATGQSPTVRDRENEILSTMACHGSVRAGRQLTLPEMNALLRDMEQFPRSNQCNHGRP 606
Query: 1355 T--TVPLVNLEAL 1365
T + L +L+AL
Sbjct: 607 TWVKIGLDDLDAL 619
>gi|418142967|ref|ZP_12779770.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13494]
gi|353810710|gb|EHD90960.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13494]
Length = 649
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--GGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|420261474|ref|ZP_14764118.1| DNA mismatch repair protein HexB [Enterococcus sp. C1]
gi|394771408|gb|EJF51169.1| DNA mismatch repair protein HexB [Enterococcus sp. C1]
Length = 702
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 170/353 (48%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I L E + N + +G V+ VV+ELV N+VDAG+T++ +++ ++V+D+
Sbjct: 1 MGKIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ +RHATSK + + DD I T GFRGEAL SI+ VS+L I T G
Sbjct: 61 GEGIAEEDVLTAFKRHATSK---IHNRDDLFRIRTLGFRGEALPSIASVSILSIETAVKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G +KG + R+ GT + +LFYN P R KY+++ + L ++
Sbjct: 118 AQQGSFVRLKGGAVEEHLPANLRQ--GTKITVENLFYNTPARLKYVKTLQTE-LANIGDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIAL HP+V+F+ + +++L T S + +G+E + ++ D +
Sbjct: 175 VNRIALSHPEVAFRLV--HEGNKMLSTTGSGQLKQTIAGIYGVETAKKMIAIDTEDLDFK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + + + + IN RY+ ++ N + G
Sbjct: 233 VTGFVSLPEVTRASRNYLSTIINGRYI-------------------RNFALNKAIVAGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SK P +L ++ L D+ P K V E + I +AI A
Sbjct: 274 SKLMVGRFPLAVLEVKMDPLLVDVNVHPTKQEVRLSKEEELTKLISKAINEAL 326
>gi|266623036|ref|ZP_06115971.1| DNA mismatch repair protein MutL [Clostridium hathewayi DSM 13479]
gi|288865200|gb|EFC97498.1| DNA mismatch repair protein MutL [Clostridium hathewayi DSM 13479]
Length = 662
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 174/358 (48%), Gaps = 34/358 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
M I L + N + +G V+ VV+EL+ N++DA AT V V + +++V D+
Sbjct: 1 MPNITLLDQNTINKIAAGEVIERPASVVKELLENAIDARATAVTVEIKEGGTTFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI R+ + L RH+TSK + ++D I + GFRGEALASI+ V +E+ITK
Sbjct: 61 GCGIPREEVPLAFLRHSTSK---IKSVEDLFTISSLGFRGEALASIAAVCQVELITKTSE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
G R ++G G++ +++ GTT ++R+LFYN P RRK++++ + H
Sbjct: 118 ALTGSRYQIEG------GMERPLEEIGAPEGTTFIARNLFYNTPARRKFLKTPMTEGSH- 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
V + V +IAL HP++S +FI ++ L T + + ++ + FG E + L V A
Sbjct: 171 VAELVEKIALSHPEISIRFI--QNNQNKLHTSGNHNLKDIIYTVFGREIAANLLAVEAKK 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
+ ISG+I P + + ++ +IN RY+ I K + F +
Sbjct: 229 QDISISGFIGKPVIARGNRNYENYFINGRYIRSSIISKAIEEAYKPFMMQHKY------- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +L+ L D+ P K + F+D E V + A+ A K
Sbjct: 282 ----------PFTMLHFTIEPELLDVNVHPTKMELRFRDGEMVYRMVYDAVSGALAHK 329
Score = 48.1 bits (113), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 20/198 (10%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
K++ QV + V L +IDQHAA E++ L E L S LD L L
Sbjct: 474 KLIGQVFDTYWLVEFNEQLYIIDQHAAHEKV-LYEKTMATLKNREYSSQMLDPPIILTLN 532
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLS 1285
LL+ + D G+ I G R + + VP + +
Sbjct: 533 MNEEVLLKEHMKYFSDMGF--EIEPFGGREY--------------AVRGVPANLLSIAKK 576
Query: 1286 DVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
D+ L+E + L+D D S+ P + + + +C+ A+ G+ L +E ++++L
Sbjct: 577 DL-LIEMIDGLSD-DVSTHNPDIIYDRVATMSCKAAVKGGNRLSAAEANELIDQLLNLEN 634
Query: 1346 CFQCAHGRPTTVPLVNLE 1363
+ C HGRPT + + E
Sbjct: 635 PYACPHGRPTIISMSKYE 652
>gi|163941456|ref|YP_001646340.1| DNA mismatch repair protein [Bacillus weihenstephanensis KBAB4]
gi|423518405|ref|ZP_17494886.1| DNA mismatch repair protein mutL [Bacillus cereus HuA2-4]
gi|229890121|sp|A9VS12.1|MUTL_BACWK RecName: Full=DNA mismatch repair protein MutL
gi|163863653|gb|ABY44712.1| DNA mismatch repair protein MutL [Bacillus weihenstephanensis
KBAB4]
gi|401161132|gb|EJQ68500.1| DNA mismatch repair protein mutL [Bacillus cereus HuA2-4]
Length = 644
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 172/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>gi|168699267|ref|ZP_02731544.1| DNA mismatch repair protein [Gemmata obscuriglobus UQM 2246]
Length = 731
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 190/403 (47%), Gaps = 40/403 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I +LP V N + +G V+ VV+EL+ NS+DAGAT++ + + ++VVDD
Sbjct: 1 MSRIRQLPPDVVNKIAAGEVIERPASVVKELLENSIDAGATRIDIDLDAGGTELIRVVDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI D L L +HATSK L DD I T GFRGEALASIS V + + ++ H
Sbjct: 61 GCGIDPDDLALAFSQHATSK---LTTADDLFQIRTMGFRGEALASISGVGQITLQSRTHT 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERK---DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G KC GI D R GT + R LFYN PVR+K+++S ++ H V
Sbjct: 118 AASGCE-----VKCDGNGISDPRPWNGAPGTRMEVRHLFYNVPVRKKFLKSVATELGH-V 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGI-EDFSFLDEVNAND 235
+ V R+AL HP + I + + L+ S+ L I+ F E L E+++ D
Sbjct: 172 CETVTRLALAHPAL---HITLRHNNRLVYDIPGSAGLLDRIALFFTGEVRDALYEIDSGD 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
G + + GYI+ P QY+++N R+ + S +S++ G L
Sbjct: 229 GPMRLRGYIADPKCDRGNSKLQYLFVNGRW---------FRDRSLSHALQESYR---GLL 276
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK-- 353
R L L P D+ P K+ V F++ V + + I+ +K+
Sbjct: 277 MAGRYT-----IGFLFLTLPPDKLDVNVHPTKSEVRFQENSLVYSLVRATIKQRLLKENL 331
Query: 354 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQ 396
I H + +ED L E + + L +SP + LA+Q
Sbjct: 332 IPHLTVP-QGIEDGALAEEP---EPKIETPSLFTSPRRELAEQ 370
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
+ VIDQHA ERI E+LR ++ +G+ V L + + LP L+ A+ + + G
Sbjct: 562 MLVIDQHALHERILFEQLRRRIRAGQ-LEVQRLLIPEPVDLPAEQAALVLECADALAELG 620
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1304
+ F N I L + P + G V L + + + + T
Sbjct: 621 LDVS-------DFGGN---------TILLSSYPTLLGRKPPHVILRGVIDHIVTQERAPT 664
Query: 1305 TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEA 1364
+ ++ + AC+ A+ GD L P E ++ + C HGRPT++ L +
Sbjct: 665 KEALLHLLMATMACKAAVKAGDKLSPEEITYLLRLREMAEDSHHCPHGRPTSL-LFSRAE 723
Query: 1365 LHKQ 1368
L KQ
Sbjct: 724 LDKQ 727
>gi|417091704|ref|ZP_11956510.1| DNA mismatch repair protein MutL [Streptococcus suis R61]
gi|353533010|gb|EHC02678.1| DNA mismatch repair protein MutL [Streptococcus suis R61]
Length = 645
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 170/356 (47%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRHATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H V
Sbjct: 118 SAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 173 -DVVNRLSLAHPEIAFALVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ISGY+S P + + + + ++IN RY+ ++ N L+
Sbjct: 230 DFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAILE 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 271 GYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|164688071|ref|ZP_02212099.1| hypothetical protein CLOBAR_01716 [Clostridium bartlettii DSM
16795]
gi|164602484|gb|EDQ95949.1| DNA mismatch repair domain protein [Clostridium bartlettii DSM
16795]
Length = 687
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 188/357 (52%), Gaps = 35/357 (9%)
Query: 1 MGT-INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVV 57
MG IN L + N + +G V+ + VV+EL+ N++D+GAT+V V + G C +K+
Sbjct: 1 MGKYINILDDLTINKIAAGEVVERPSSVVKELLENAIDSGATQVVVDITDGGKKC-IKIS 59
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI + RHATSK+ + D+ D + + GFRGEALASIS VS +E++TK
Sbjct: 60 DNGEGILSSEVEKCFLRHATSKIKSIDDLFD---LYSLGFRGEALASISAVSNIEMVTKT 116
Query: 118 HGRPNGYRKVMKGSKCLY---LGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + V+ GSK + +G D GTT+ +DLF+N PVR K+++S+ + ++
Sbjct: 117 KEEMIGTKIVLSGSKIIKKEPVGTKD-----GTTITVKDLFFNTPVRAKFLKSTHAETIN 171
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ + ++A+ +P V K+I+ + +L T + ++++ S +G E L EV+
Sbjct: 172 -ISDLINKLAIGNPNVRLKYIN--NSKLMLNTPGDNKLISVIRSIYGKEITDNLIEVDYE 228
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
D ++ISGYI + S K Q++YIN R+V I +N +S+K+
Sbjct: 229 DEKIKISGYIGNNNIYRSNKNLQHIYINKRFVKSKVILDAIN---------ESYKSIIPI 279
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
+K C LN++ S D+ P K V F+D + V I I++ +
Sbjct: 280 -----NKFGVC---FLNIKINPSEIDVNIHPTKLEVKFQDEKEVYIKIRDVIKNKLL 328
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 90/215 (41%), Gaps = 38/215 (17%)
Query: 1165 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV 1224
D KV+ + +I + G ++ ++DQHAA E++ EE K +
Sbjct: 500 DFKVIGTILNTYIVLEKGTSMYLLDQHAAHEKVLYEEYMTKFKN---------------- 543
Query: 1225 LPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQR---QITV-----ITLLAV 1276
QN Q+ + + + KNLNL + +I + I + V
Sbjct: 544 ---------QNIDMQMLLDPIVIELSSVDMLDVEKNLNLFMKFGFEIEIFGDNHIMVRGV 594
Query: 1277 PCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALI 1336
P IFGV S+ + + + + D + S + + S +CR AI D + E +
Sbjct: 595 PNIFGVAQSEKFIFQIIDNIGDLESSYDLK---MDKIASMSCRAAIKANDKIHFDEINSL 651
Query: 1337 VEELKQTSLCFQCAHGRPTTVPLVN--LEALHKQI 1369
+ ++++ + C HGRP+ V + +E + K+I
Sbjct: 652 LSKMEKCENPYTCPHGRPSMVEISKKEIEKMFKRI 686
>gi|419498775|ref|ZP_14038475.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47597]
gi|379603663|gb|EHZ68431.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47597]
Length = 649
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|86158140|ref|YP_464925.1| DNA mismatch repair protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|123764022|sp|Q2IIL0.1|MUTL_ANADE RecName: Full=DNA mismatch repair protein MutL
gi|85774651|gb|ABC81488.1| DNA mismatch repair protein MutL [Anaeromyxobacter dehalogenans
2CP-C]
Length = 608
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 172/361 (47%), Gaps = 37/361 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I+ LP + N + +G V+ +V+ELV N++DAGAT + V V V+V DD
Sbjct: 1 MPRIHVLPPGLVNQIAAGEVVERPASIVKELVENALDAGATAIGVDVEEGGLALVRVADD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSG+ RD +L ERHATSK L D + IGT GFRGEA+ +I+ VS + T
Sbjct: 61 GSGMDRDDALLALERHATSK---LRDAEGLAAIGTMGFRGEAVPAIASVSRFRLDTSPGE 117
Query: 120 RPNGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R ++G LG + + GTTV RDLF+N P RRK+M+++ + H V +
Sbjct: 118 DGAGTRVEIEGG---VLGEVAPVARPRGTTVEVRDLFFNTPARRKFMRAASTEAGH-VSE 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDGA 237
V+R+AL P V F + S L+ + LA + G E L V+A G
Sbjct: 174 AVIRLALARPDVGFT---LRSGGRLVLGARAGGGLADRAGQALGREAHRHLLPVDARRGE 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVC-KGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ + G I SP S + Y+++N RYV + H +L A +
Sbjct: 231 VRVHGLICSPDHSEATGRALYLFVNGRYVRDRAAAHAVLRAFAGTLPPGRH--------- 281
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-WM 351
PA +L + P D+ P K V F + ++ + + A+R+A W+
Sbjct: 282 ---------PAGVLFVELPLDRVDVNVHPQKLEVRFAEGREVFDALFHTVAGALRTAPWL 332
Query: 352 K 352
+
Sbjct: 333 R 333
Score = 47.8 bits (112), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 1182 GGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIK 1241
GGTL VIDQHA+ ER+ L+ + YL Q + LP + L+ ++
Sbjct: 436 GGTLVVIDQHASHERMLFHRLKEAFRARRIPVQPYL-LPQVVTLPPAAARALEAGLAELG 494
Query: 1242 DWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG 1301
G+ + G +F A + GV+L+ + L + QLAD +
Sbjct: 495 RLGF--DAEPFGGDAFAVK-------------GAPAALAGVDLTAL-LTDLGSQLADVER 538
Query: 1302 SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVN 1361
S + +L + AC A+ + P E +++ L +C HGRP L +
Sbjct: 539 GSAVDDAFHDLLATMACHAAVRANQDVSPEEARALLDGLDAIDFKARCPHGRPVVFEL-S 597
Query: 1362 LEALHKQIAQ 1371
L L +++ +
Sbjct: 598 LADLERRVGR 607
>gi|417685662|ref|ZP_12334942.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41301]
gi|418158823|ref|ZP_12795529.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17227]
gi|332077480|gb|EGI87941.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41301]
gi|353826478|gb|EHE06636.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17227]
Length = 649
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLALFAK 396
>gi|418075315|ref|ZP_12712557.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47502]
gi|353751329|gb|EHD31961.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47502]
Length = 649
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|418165805|ref|ZP_12802463.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17971]
gi|353831900|gb|EHE12023.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17971]
Length = 649
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 207/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V +LF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVENLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|422872494|ref|ZP_16918987.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1087]
gi|328944744|gb|EGG38905.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1087]
Length = 688
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 214/469 (45%), Gaps = 60/469 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 42 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 101
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 102 GEGIDYEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 158
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 159 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 213
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 214 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 270
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 271 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 311
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 312 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ- 370
Query: 355 AHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S + Q+S L + L +Q D + +++
Sbjct: 371 -------DLIPDALENLAKSTVKRATKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQL 423
Query: 409 TFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+F+E V + NT+ + QP FAE P ++DH
Sbjct: 424 SFEE----SVGPVQANTDEKAEPQPTSV------KFAERKPASYDQLDH 462
>gi|419439426|ref|ZP_13979483.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40410]
gi|379581911|gb|EHZ46794.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40410]
Length = 649
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|419707080|ref|ZP_14234583.1| DNA mismatch repair protein mutL [Streptococcus salivarius PS4]
gi|383283165|gb|EIC81126.1| DNA mismatch repair protein mutL [Streptococcus salivarius PS4]
Length = 647
Score = 143 bits (360), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 177/353 (50%), Gaps = 38/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T G
Sbjct: 61 GEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISRLTIVTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + V KG + E +D VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 EAYGTKLVAKGGEI-------ESQDPISAPVGTKITVENLFYNTPARLKYMKSLQAELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD G
Sbjct: 227 SDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD---------G 271
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
+ G + P +++++ L D+ P K V + ++A I AI
Sbjct: 272 Y--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|168493871|ref|ZP_02718014.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC3059-06]
gi|169833770|ref|YP_001693695.1| DNA mismatch repair protein [Streptococcus pneumoniae Hungary19A-6]
gi|418077725|ref|ZP_12714949.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
4027-06]
gi|418079884|ref|ZP_12717100.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6735-05]
gi|418088589|ref|ZP_12725750.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43265]
gi|418097598|ref|ZP_12734700.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6901-05]
gi|418113777|ref|ZP_12750770.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5787-06]
gi|418115944|ref|ZP_12752921.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6963-05]
gi|418133909|ref|ZP_12770769.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11426]
gi|419492337|ref|ZP_14032065.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47210]
gi|421288835|ref|ZP_15739587.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA54354]
gi|421304151|ref|ZP_15754809.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA62331]
gi|238688359|sp|B1I8F2.1|MUTL_STRPI RecName: Full=DNA mismatch repair protein MutL
gi|168996272|gb|ACA36884.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
Hungary19A-6]
gi|183576093|gb|EDT96621.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC3059-06]
gi|353748747|gb|EHD29398.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
4027-06]
gi|353754203|gb|EHD34816.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6735-05]
gi|353764330|gb|EHD44879.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43265]
gi|353771754|gb|EHD52261.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6901-05]
gi|353788441|gb|EHD68838.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5787-06]
gi|353791582|gb|EHD71956.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
6963-05]
gi|353903896|gb|EHE79410.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11426]
gi|379596034|gb|EHZ60839.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47210]
gi|395890095|gb|EJH01101.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA54354]
gi|395906542|gb|EJH17440.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA62331]
Length = 649
Score = 143 bits (360), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|15900110|ref|NP_344714.1| DNA mismatch repair protein [Streptococcus pneumoniae TIGR4]
gi|15902204|ref|NP_357754.1| DNA mismatch repair protein [Streptococcus pneumoniae R6]
gi|111657934|ref|ZP_01408643.1| hypothetical protein SpneT_02000883 [Streptococcus pneumoniae
TIGR4]
gi|116516396|ref|YP_815684.1| DNA mismatch repair protein [Streptococcus pneumoniae D39]
gi|148983575|ref|ZP_01816894.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP3-BS71]
gi|148987911|ref|ZP_01819374.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP6-BS73]
gi|148992754|ref|ZP_01822397.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP9-BS68]
gi|148996599|ref|ZP_01824317.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP11-BS70]
gi|149017847|ref|ZP_01834306.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP23-BS72]
gi|168483814|ref|ZP_02708766.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC1873-00]
gi|168490361|ref|ZP_02714560.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae SP195]
gi|168576395|ref|ZP_02722278.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae MLV-016]
gi|182683158|ref|YP_001834905.1| DNA mismatch repair protein [Streptococcus pneumoniae CGSP14]
gi|221231085|ref|YP_002510237.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae ATCC
700669]
gi|237649752|ref|ZP_04524004.1| DNA mismatch repair protein [Streptococcus pneumoniae CCRI 1974]
gi|237821450|ref|ZP_04597295.1| DNA mismatch repair protein [Streptococcus pneumoniae CCRI 1974M2]
gi|298230110|ref|ZP_06963791.1| DNA mismatch repair protein [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255027|ref|ZP_06978613.1| DNA mismatch repair protein [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298501976|ref|YP_003723916.1| DNA mismatch repair protein [Streptococcus pneumoniae TCH8431/19A]
gi|303255123|ref|ZP_07341199.1| DNA mismatch repair protein [Streptococcus pneumoniae BS455]
gi|307066856|ref|YP_003875822.1| DNA mismatch repair protein [Streptococcus pneumoniae AP200]
gi|387756741|ref|YP_006063720.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae OXC141]
gi|387758536|ref|YP_006065514.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae INV200]
gi|405761627|ref|YP_006702223.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae SPNA45]
gi|415696722|ref|ZP_11456364.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 459-5]
gi|415748558|ref|ZP_11476610.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae SV35]
gi|415751284|ref|ZP_11478519.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae SV36]
gi|417678152|ref|ZP_12327553.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17570]
gi|417693104|ref|ZP_12342293.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47901]
gi|417695339|ref|ZP_12344519.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47368]
gi|417697654|ref|ZP_12346827.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41317]
gi|418073060|ref|ZP_12710323.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11184]
gi|418082083|ref|ZP_12719285.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44288]
gi|418084273|ref|ZP_12721461.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47281]
gi|418090805|ref|ZP_12727950.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44452]
gi|418095272|ref|ZP_12732388.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16531]
gi|418099761|ref|ZP_12736850.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7286-06]
gi|418101886|ref|ZP_12738963.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP070]
gi|418104256|ref|ZP_12741316.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44500]
gi|418108413|ref|ZP_12745448.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41410]
gi|418109145|ref|ZP_12746174.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49447]
gi|418118121|ref|ZP_12755082.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA18523]
gi|418122504|ref|ZP_12759439.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44378]
gi|418124800|ref|ZP_12761723.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44511]
gi|418127086|ref|ZP_12763984.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP170]
gi|418136248|ref|ZP_12773092.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11663]
gi|418145421|ref|ZP_12782207.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13637]
gi|418147663|ref|ZP_12784430.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13856]
gi|418149755|ref|ZP_12786511.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14798]
gi|418168272|ref|ZP_12804918.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19077]
gi|418170405|ref|ZP_12807035.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19451]
gi|418174995|ref|ZP_12811593.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41437]
gi|418177232|ref|ZP_12813817.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41565]
gi|418181816|ref|ZP_12818377.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43380]
gi|418186201|ref|ZP_12822732.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47360]
gi|418188426|ref|ZP_12824941.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47373]
gi|418190646|ref|ZP_12827151.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47388]
gi|418194981|ref|ZP_12831462.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47688]
gi|418197097|ref|ZP_12833563.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47778]
gi|418199261|ref|ZP_12835710.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47976]
gi|418213381|ref|ZP_12840116.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA54644]
gi|418215660|ref|ZP_12842386.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|418217928|ref|ZP_12844597.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP127]
gi|418220120|ref|ZP_12846777.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47751]
gi|418222482|ref|ZP_12849128.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5185-06]
gi|418228925|ref|ZP_12855536.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP01]
gi|418231324|ref|ZP_12857913.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA07228]
gi|418233400|ref|ZP_12859981.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA08780]
gi|418235618|ref|ZP_12862187.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19690]
gi|418237771|ref|ZP_12864328.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422218|ref|ZP_13962437.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43264]
gi|419424244|ref|ZP_13964447.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7533-05]
gi|419426378|ref|ZP_13966562.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5652-06]
gi|419428451|ref|ZP_13968622.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11856]
gi|419430628|ref|ZP_13970774.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP05]
gi|419432833|ref|ZP_13972955.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40183]
gi|419435090|ref|ZP_13975186.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
8190-05]
gi|419443829|ref|ZP_13983844.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19923]
gi|419445938|ref|ZP_13985944.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7879-04]
gi|419448097|ref|ZP_13988095.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
4075-00]
gi|419450191|ref|ZP_13990180.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP02]
gi|419452332|ref|ZP_13992307.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP03]
gi|419456775|ref|ZP_13996724.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02254]
gi|419459046|ref|ZP_13998982.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02270]
gi|419461316|ref|ZP_14001234.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02714]
gi|419463437|ref|ZP_14003333.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA04175]
gi|419468104|ref|ZP_14007977.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA06083]
gi|419470216|ref|ZP_14010076.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA07914]
gi|419472291|ref|ZP_14012144.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13430]
gi|419474565|ref|ZP_14014407.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14688]
gi|419479081|ref|ZP_14018894.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19101]
gi|419483446|ref|ZP_14023222.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43257]
gi|419485663|ref|ZP_14025430.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44128]
gi|419488682|ref|ZP_14028435.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44386]
gi|419496618|ref|ZP_14036330.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47522]
gi|419503063|ref|ZP_14042739.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47760]
gi|419505176|ref|ZP_14044837.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49194]
gi|419507284|ref|ZP_14046940.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49542]
gi|419513796|ref|ZP_14053424.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
England14-9]
gi|419522476|ref|ZP_14062059.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13723]
gi|419524950|ref|ZP_14064516.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14373]
gi|419531472|ref|ZP_14070992.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47794]
gi|419533629|ref|ZP_14073137.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17457]
gi|421205602|ref|ZP_15662669.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2090008]
gi|421210197|ref|ZP_15667189.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070035]
gi|421226351|ref|ZP_15683065.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2072047]
gi|421228864|ref|ZP_15685542.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2061376]
gi|421231013|ref|ZP_15687663.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2080076]
gi|421233229|ref|ZP_15689854.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2061617]
gi|421235368|ref|ZP_15691969.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2071004]
gi|421239754|ref|ZP_15696307.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2080913]
gi|421242011|ref|ZP_15698540.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2081074]
gi|421246350|ref|ZP_15702841.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2082170]
gi|421248538|ref|ZP_15705001.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2082239]
gi|421265262|ref|ZP_15716146.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR27]
gi|421269620|ref|ZP_15720477.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR48]
gi|421271830|ref|ZP_15722677.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR55]
gi|421277984|ref|ZP_15728796.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17301]
gi|421280223|ref|ZP_15731022.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA04672]
gi|421286705|ref|ZP_15737472.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58771]
gi|421290982|ref|ZP_15741726.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA56348]
gi|421293272|ref|ZP_15743999.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA56113]
gi|421299902|ref|ZP_15750574.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA19998]
gi|421306387|ref|ZP_15757034.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA60132]
gi|421308652|ref|ZP_15759283.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA62681]
gi|421310886|ref|ZP_15761499.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58981]
gi|421313159|ref|ZP_15763753.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA47562]
gi|61225739|sp|P0A3R1.1|HEXB_STRPN RecName: Full=DNA mismatch repair protein HexB
gi|61225740|sp|P0A3R2.1|HEXB_STRR6 RecName: Full=DNA mismatch repair protein HexB
gi|122279430|sp|Q04MR4.1|MUTL_STRP2 RecName: Full=DNA mismatch repair protein MutL
gi|238691184|sp|B2IS10.1|MUTL_STRPS RecName: Full=DNA mismatch repair protein MutL
gi|254766177|sp|B8ZKC9.1|MUTL_STRPJ RecName: Full=DNA mismatch repair protein MutL
gi|14971640|gb|AAK74354.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae TIGR4]
gi|15457702|gb|AAK98964.1| DNA mismatch repair protein [Streptococcus pneumoniae R6]
gi|116076972|gb|ABJ54692.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae D39]
gi|147757174|gb|EDK64213.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP11-BS70]
gi|147923722|gb|EDK74834.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP3-BS71]
gi|147926375|gb|EDK77448.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP6-BS73]
gi|147928480|gb|EDK79495.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP9-BS68]
gi|147931411|gb|EDK82389.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae
SP23-BS72]
gi|172042907|gb|EDT50953.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC1873-00]
gi|182628492|gb|ACB89440.1| DNA mismatch repair protein [Streptococcus pneumoniae CGSP14]
gi|183393266|gb|ACC61793.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|183393272|gb|ACC61796.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|183571322|gb|EDT91850.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae SP195]
gi|183577800|gb|EDT98328.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae MLV-016]
gi|202073440|gb|ACC61792.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|202073445|gb|ACC61795.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|220673545|emb|CAR68031.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae ATCC
700669]
gi|251765212|gb|ACC61794.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|298237571|gb|ADI68702.1| DNA mismatch repair protein [Streptococcus pneumoniae TCH8431/19A]
gi|301799330|emb|CBW31865.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae OXC141]
gi|301801125|emb|CBW33798.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae INV200]
gi|302597953|gb|EFL65023.1| DNA mismatch repair protein [Streptococcus pneumoniae BS455]
gi|306408393|gb|ADM83820.1| DNA mismatch repair enzyme (predicted ATPase) [Streptococcus
pneumoniae AP200]
gi|332075846|gb|EGI86313.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17570]
gi|332202095|gb|EGJ16164.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41317]
gi|332203336|gb|EGJ17403.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47368]
gi|332204187|gb|EGJ18252.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47901]
gi|353752598|gb|EHD33223.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11184]
gi|353757520|gb|EHD38113.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44288]
gi|353760576|gb|EHD41152.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47281]
gi|353766178|gb|EHD46718.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44452]
gi|353772052|gb|EHD52558.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16531]
gi|353773760|gb|EHD54255.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7286-06]
gi|353776940|gb|EHD57414.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41410]
gi|353777598|gb|EHD58070.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP070]
gi|353778690|gb|EHD59156.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44500]
gi|353784438|gb|EHD64858.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49447]
gi|353792970|gb|EHD73340.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA18523]
gi|353797977|gb|EHD78307.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44378]
gi|353800891|gb|EHD81199.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP170]
gi|353801656|gb|EHD81958.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44511]
gi|353813861|gb|EHD94088.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13856]
gi|353816295|gb|EHD96504.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13637]
gi|353817897|gb|EHD98097.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14798]
gi|353836191|gb|EHE16279.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19077]
gi|353838699|gb|EHE18776.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19451]
gi|353843555|gb|EHE23599.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41437]
gi|353845674|gb|EHE25714.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41565]
gi|353850053|gb|EHE30057.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43380]
gi|353854023|gb|EHE34003.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47360]
gi|353855568|gb|EHE35537.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47373]
gi|353858245|gb|EHE38205.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47388]
gi|353863100|gb|EHE43029.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47688]
gi|353865634|gb|EHE45541.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47778]
gi|353866849|gb|EHE46745.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47976]
gi|353870664|gb|EHE50535.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA54644]
gi|353874566|gb|EHE54421.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|353877069|gb|EHE56913.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NP127]
gi|353877917|gb|EHE57756.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47751]
gi|353881570|gb|EHE61383.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5185-06]
gi|353888990|gb|EHE68762.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA07228]
gi|353889984|gb|EHE69751.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA08780]
gi|353891363|gb|EHE71119.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP01]
gi|353893547|gb|EHE73292.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19690]
gi|353894904|gb|EHE74644.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353903306|gb|EHE78830.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11663]
gi|379533461|gb|EHY98674.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02254]
gi|379533918|gb|EHY99130.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02270]
gi|379535352|gb|EHZ00556.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA02714]
gi|379540716|gb|EHZ05887.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA04175]
gi|379547849|gb|EHZ12984.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA07914]
gi|379548374|gb|EHZ13506.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA06083]
gi|379553193|gb|EHZ18277.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13430]
gi|379553702|gb|EHZ18785.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA11856]
gi|379560097|gb|EHZ25123.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13723]
gi|379560654|gb|EHZ25676.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14373]
gi|379562072|gb|EHZ27086.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA14688]
gi|379568591|gb|EHZ33570.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17457]
gi|379571522|gb|EHZ36479.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19923]
gi|379574415|gb|EHZ39358.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA19101]
gi|379578955|gb|EHZ43863.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40183]
gi|379582957|gb|EHZ47834.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43257]
gi|379588572|gb|EHZ53412.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44128]
gi|379589549|gb|EHZ54388.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA43264]
gi|379590797|gb|EHZ55635.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA44386]
gi|379602743|gb|EHZ67513.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47522]
gi|379607090|gb|EHZ71836.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49194]
gi|379609798|gb|EHZ74535.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47794]
gi|379610437|gb|EHZ75168.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47760]
gi|379613419|gb|EHZ78131.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49542]
gi|379615396|gb|EHZ80102.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7879-04]
gi|379616759|gb|EHZ81452.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
8190-05]
gi|379619338|gb|EHZ84010.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
5652-06]
gi|379621048|gb|EHZ85697.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
7533-05]
gi|379624909|gb|EHZ89537.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
4075-00]
gi|379625336|gb|EHZ89963.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP02]
gi|379628295|gb|EHZ92899.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP03]
gi|379631872|gb|EHZ96448.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
EU-NP05]
gi|379638286|gb|EIA02831.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
England14-9]
gi|381310889|gb|EIC51714.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae SV36]
gi|381318815|gb|EIC59532.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae SV35]
gi|381319815|gb|EIC60497.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 459-5]
gi|395575896|gb|EJG36456.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2070035]
gi|395578023|gb|EJG38551.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2090008]
gi|395597210|gb|EJG57417.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2080076]
gi|395597421|gb|EJG57627.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2072047]
gi|395598531|gb|EJG58732.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2061376]
gi|395603941|gb|EJG64074.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2061617]
gi|395604287|gb|EJG64419.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2071004]
gi|395610628|gb|EJG70704.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2080913]
gi|395611874|gb|EJG71928.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2081074]
gi|395615167|gb|EJG75183.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2082239]
gi|395616469|gb|EJG76480.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2082170]
gi|395869284|gb|EJG80399.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR27]
gi|395870272|gb|EJG81385.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR48]
gi|395877389|gb|EJG88458.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
SPAR55]
gi|395883103|gb|EJG94146.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17301]
gi|395883580|gb|EJG94622.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA04672]
gi|395890964|gb|EJH01967.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58771]
gi|395896326|gb|EJH07293.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA56113]
gi|395896782|gb|EJH07747.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA56348]
gi|395900999|gb|EJH11936.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA19998]
gi|395910097|gb|EJH20971.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA60132]
gi|395912797|gb|EJH23654.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA62681]
gi|395913846|gb|EJH24695.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA58981]
gi|395915130|gb|EJH25970.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae GA47562]
gi|404278516|emb|CCM09136.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae SPNA45]
gi|429317175|emb|CCP36928.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
SPN034156]
gi|429318717|emb|CCP31920.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
SPN034183]
gi|429320530|emb|CCP33893.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
SPN994039]
gi|429322350|emb|CCP29934.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
SPN994038]
Length = 649
Score = 143 bits (360), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|253750975|ref|YP_003024116.1| DNA mismatch repair protein [Streptococcus suis SC84]
gi|253752875|ref|YP_003026015.1| DNA mismatch repair protein [Streptococcus suis P1/7]
gi|386579035|ref|YP_006075440.1| DNA mismatch repair protein MutL [Streptococcus suis JS14]
gi|386581102|ref|YP_006077506.1| DNA mismatch repair protein MutL [Streptococcus suis SS12]
gi|386587335|ref|YP_006083736.1| DNA mismatch repair protein MutL [Streptococcus suis A7]
gi|403060757|ref|YP_006648973.1| DNA mismatch repair protein [Streptococcus suis S735]
gi|251815264|emb|CAZ50829.1| DNA mismatch repair protein MutL [Streptococcus suis SC84]
gi|251819120|emb|CAR44195.1| DNA mismatch repair protein MutL [Streptococcus suis P1/7]
gi|319757227|gb|ADV69169.1| DNA mismatch repair protein MutL [Streptococcus suis JS14]
gi|353733248|gb|AER14258.1| DNA mismatch repair protein MutL [Streptococcus suis SS12]
gi|354984496|gb|AER43394.1| DNA mismatch repair protein MutL [Streptococcus suis A7]
gi|402808083|gb|AFQ99574.1| DNA mismatch repair protein [Streptococcus suis S735]
Length = 645
Score = 143 bits (360), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 170/356 (47%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRHATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H V
Sbjct: 118 SAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 173 -DVVNRLSLAHPEIAFVLVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ISGY+S P + + + + ++IN RY+ ++ N L+
Sbjct: 230 DFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAILE 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 271 GYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|225855945|ref|YP_002737456.1| DNA mismatch repair protein [Streptococcus pneumoniae P1031]
gi|225860206|ref|YP_002741715.1| DNA mismatch repair protein [Streptococcus pneumoniae Taiwan19F-14]
gi|387787376|ref|YP_006252444.1| DNA mismatch repair protein [Streptococcus pneumoniae ST556]
gi|410475679|ref|YP_006742438.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
gamPNI0373]
gi|417311764|ref|ZP_12098481.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA04375]
gi|418156406|ref|ZP_12793125.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16833]
gi|418226778|ref|ZP_12853399.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
3063-00]
gi|419437920|ref|ZP_13977990.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13499]
gi|419500942|ref|ZP_14040629.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47628]
gi|419527197|ref|ZP_14066744.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17719]
gi|421237638|ref|ZP_15694211.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2071247]
gi|421244085|ref|ZP_15700590.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2081685]
gi|444386710|ref|ZP_21184737.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS125219]
gi|444390661|ref|ZP_21188576.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS70012]
gi|444392295|ref|ZP_21190032.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS81218]
gi|444394946|ref|ZP_21192494.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0002]
gi|444396649|ref|ZP_21194136.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0006]
gi|444399485|ref|ZP_21196948.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0007]
gi|444401674|ref|ZP_21198857.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0008]
gi|444406031|ref|ZP_21202856.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0009]
gi|444407018|ref|ZP_21203685.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0010]
gi|444409114|ref|ZP_21205714.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0076]
gi|444413611|ref|ZP_21209926.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0153]
gi|444416228|ref|ZP_21212419.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0199]
gi|444417603|ref|ZP_21213633.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0360]
gi|444420637|ref|ZP_21216407.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0427]
gi|444422858|ref|ZP_21218497.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0446]
gi|254766180|sp|C1CI68.1|MUTL_STRZP RecName: Full=DNA mismatch repair protein MutL
gi|254766181|sp|C1CP43.1|MUTL_STRZT RecName: Full=DNA mismatch repair protein MutL
gi|225726107|gb|ACO21959.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae P1031]
gi|225727696|gb|ACO23547.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
Taiwan19F-14]
gi|327390582|gb|EGE88922.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA04375]
gi|353825683|gb|EHE05847.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16833]
gi|353883983|gb|EHE63785.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
3063-00]
gi|379137118|gb|AFC93909.1| DNA mismatch repair protein [Streptococcus pneumoniae ST556]
gi|379537925|gb|EHZ03106.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13499]
gi|379568360|gb|EHZ33340.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17719]
gi|379603187|gb|EHZ67956.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47628]
gi|395605164|gb|EJG65295.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2071247]
gi|395611051|gb|EJG71125.1| DNA mismatch repair protein mutL [Streptococcus pneumoniae 2081685]
gi|406368624|gb|AFS42314.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
gamPNI0373]
gi|444254461|gb|ELU60894.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS125219]
gi|444257124|gb|ELU63462.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS70012]
gi|444258915|gb|ELU65232.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0002]
gi|444261880|gb|ELU68178.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0006]
gi|444263698|gb|ELU69849.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS81218]
gi|444267775|gb|ELU73664.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0008]
gi|444268660|gb|ELU74501.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0007]
gi|444270432|gb|ELU76203.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0009]
gi|444270614|gb|ELU76365.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0010]
gi|444272782|gb|ELU78469.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0153]
gi|444277865|gb|ELU83357.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0199]
gi|444280327|gb|ELU85698.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0076]
gi|444283519|gb|ELU88716.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0360]
gi|444284127|gb|ELU89289.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0427]
gi|444287779|gb|ELU92690.1| DNA mismatch repair protein [Streptococcus pneumoniae PNI0446]
Length = 649
Score = 143 bits (360), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVDQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|418093031|ref|ZP_12730162.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49138]
gi|418140793|ref|ZP_12777608.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13455]
gi|418151932|ref|ZP_12788672.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16121]
gi|418163526|ref|ZP_12800202.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17371]
gi|419518006|ref|ZP_14057616.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA08825]
gi|353767384|gb|EHD47918.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA49138]
gi|353808312|gb|EHD88579.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA13455]
gi|353818577|gb|EHD98775.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA16121]
gi|353832952|gb|EHE13064.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA17371]
gi|379642219|gb|EIA06751.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA08825]
Length = 649
Score = 143 bits (360), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLISAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVDQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|423395932|ref|ZP_17373133.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-1]
gi|423406807|ref|ZP_17383956.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-3]
gi|401653674|gb|EJS71218.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-1]
gi|401660097|gb|EJS77580.1| DNA mismatch repair protein mutL [Bacillus cereus BAG2X1-3]
Length = 647
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L + + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|146317719|ref|YP_001197431.1| DNA mismatch repair protein [Streptococcus suis 05ZYH33]
gi|146319909|ref|YP_001199620.1| DNA mismatch repair protein [Streptococcus suis 98HAH33]
gi|386577057|ref|YP_006073462.1| putative mismatch repair protein HexB [Streptococcus suis GZ1]
gi|145688525|gb|ABP89031.1| DNA mismatch repair enzyme (predicted ATPase) [Streptococcus suis
05ZYH33]
gi|145690715|gb|ABP91220.1| DNA mismatch repair enzyme (predicted ATPase) [Streptococcus suis
98HAH33]
gi|292557519|gb|ADE30520.1| putative mismatch repair protein HexB [Streptococcus suis GZ1]
Length = 646
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 170/356 (47%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 2 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 61
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 62 GEGIAPDEVALALRRHATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATAD 118
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H V
Sbjct: 119 SAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIV 173
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 174 -DVVNRLSLAHPEIAFVLVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEDL 230
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ISGY+S P + + + + ++IN RY+ ++ N L+
Sbjct: 231 DFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAILE 271
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 272 GYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 327
>gi|149005925|ref|ZP_01829654.1| DNA mismatch repair protein [Streptococcus pneumoniae SP18-BS74]
gi|147762281|gb|EDK69242.1| DNA mismatch repair protein [Streptococcus pneumoniae SP18-BS74]
Length = 535
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|417935282|ref|ZP_12578602.1| DNA mismatch repair protein [Streptococcus mitis bv. 2 str. F0392]
gi|340771852|gb|EGR94367.1| DNA mismatch repair protein [Streptococcus mitis bv. 2 str. F0392]
Length = 649
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 169/353 (47%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + + +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIAIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SK P ++++ L D+ P K V ++A + AI ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMALVSEAISNSL 326
>gi|253754700|ref|YP_003027840.1| DNA mismatch repair protein [Streptococcus suis BM407]
gi|251817164|emb|CAZ54885.1| DNA mismatch repair protein MutL [Streptococcus suis BM407]
Length = 645
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 170/356 (47%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRHATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H V
Sbjct: 118 SAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 173 -DVVNRLSLAHPEIAFVLVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ISGY+S P + + + + ++IN RY+ ++ N L+
Sbjct: 230 DFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAILE 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 271 GYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|386585255|ref|YP_006081657.1| DNA mismatch repair protein MutL [Streptococcus suis D12]
gi|353737401|gb|AER18409.1| DNA mismatch repair protein MutL [Streptococcus suis D12]
Length = 645
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 170/356 (47%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRHATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHIVIETATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H V
Sbjct: 118 SAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 173 -DVVNRLSLAHPEIAFVLVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ISGY+S P + + + + ++IN RY+ ++ N L+
Sbjct: 230 DFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAILE 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 271 GYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|223933913|ref|ZP_03625875.1| DNA mismatch repair protein MutL [Streptococcus suis 89/1591]
gi|386583187|ref|YP_006079590.1| DNA mismatch repair protein [Streptococcus suis D9]
gi|223897415|gb|EEF63814.1| DNA mismatch repair protein MutL [Streptococcus suis 89/1591]
gi|353735333|gb|AER16342.1| DNA mismatch repair protein [Streptococcus suis D9]
Length = 645
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 170/356 (47%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRHATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H V
Sbjct: 118 SAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 173 -DVVNRLSLAHPEMAFALVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ISGY+S P + + + + ++IN RY+ ++ N L+
Sbjct: 230 DFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAILE 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 271 GYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|402817015|ref|ZP_10866604.1| DNA mismatch repair protein MutL [Paenibacillus alvei DSM 29]
gi|402505121|gb|EJW15647.1| DNA mismatch repair protein MutL [Paenibacillus alvei DSM 29]
Length = 795
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 170/354 (48%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L E + N + +G V+ + VV+ELV NS+DAGAT++ V V ++V D+
Sbjct: 1 MAIIKVLDEHIANQIAAGEVVERPSSVVKELVENSIDAGATRIDVSVEEGGLQLIRVKDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI D RHATSK+ D+ I + GFRGEAL SI+ V+ +E++T
Sbjct: 61 GSGIGDDDAENAFLRHATSKIQTGKDL---FSIRSLGFRGEALPSIAAVAKVELVTSTDS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R V++G + + GT + RDLFYN P R KYM++ ++ H +
Sbjct: 118 SGLGRRLVIEGGTI--KSFEPAQSMQGTEITVRDLFYNTPARLKYMKTIQTELGH-ISDL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+A+ +P ++F +E LL T + L ++ S +G++ + + E
Sbjct: 175 IYRLAMSYPNIAFTL--KHNEHTLLQTIGNGDLLQVIASVYGVQTAKGMLHIKGEHLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ GYI P + S + IN RYV P+++ + +A + FL R
Sbjct: 233 VEGYIGKPELTRSNRNAMSWMINGRYVRSFPLNQAI------------LRAYHTFLPINR 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +L++ SL D+ P K V F + AFIE +++ K+
Sbjct: 281 -----YPMLVLHVNMHPSLVDVNVHPAKLEVRFSKEAELCAFIEETVKTLLHKQ 329
>gi|395243132|ref|ZP_10420119.1| DNA mismatch repair protein mutL [Lactobacillus hominis CRBIP
24.179]
gi|394484362|emb|CCI81127.1| DNA mismatch repair protein mutL [Lactobacillus hominis CRBIP
24.179]
Length = 625
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 168/353 (47%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+EL NS+DAGAT++ V ++ + V D+
Sbjct: 1 MAKIHELSAELTNQIAAGEVIERPASVVKELCENSIDAGATRIRVNFINAGLQEISVQDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI++D L L RHATSK+ D+ I T GFRGEALASI+ V+ +EI+T G
Sbjct: 61 GSGIAKDQLDLAFTRHATSKISTQRDL---FNISTLGFRGEALASIAAVAHVEILTNTSG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
K G K LG +D GT +V RDLFYN P R KY++S ++L V
Sbjct: 118 ANGVSAKFAAGKK---LGQEDAAAPQGTKIVVRDLFYNTPARLKYLRSERTEILKIV-DI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP++SF + + +L T + + +G + ++ +
Sbjct: 174 VDRLALGHPEISFTLTN--NNKPILKTVGRDDLRLDIANIYGRHLAEKMIKIQGQTPDFK 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG ISS D+ S + F +N RYV ++L L + + G +
Sbjct: 232 ISGLISSAQDTRSTRNFISFLLNGRYVKN---YQLTQSLISGY--------------GSK 274
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
++ P ++N+ L D+ P K V + + I + I +K
Sbjct: 275 IAAKRYPIAVINIELDPLLVDVNVHPTKQEVRLSKEKELERLITQTITDTLLK 327
>gi|423611987|ref|ZP_17587848.1| DNA mismatch repair protein mutL [Bacillus cereus VD107]
gi|401246994|gb|EJR53338.1| DNA mismatch repair protein mutL [Bacillus cereus VD107]
Length = 647
Score = 142 bits (359), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 172/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANGTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L + + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|422857402|ref|ZP_16904052.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1057]
gi|327463453|gb|EGF09772.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1057]
Length = 673
Score = 142 bits (359), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 173/357 (48%), Gaps = 38/357 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 27 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 86
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 87 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 143
Query: 120 RPNGYRKVMKGSKCLYLGIDDE---RKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 144 GQHGTLLVAQGGE-----IEEHVPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 198
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAND 235
+ R++L HP+V+F I S+ + + S L IS +G+ + E++A+D
Sbjct: 199 -DVINRLSLAHPEVAFTLI---SDGREMTRTAGSGNLRQAISGIYGLATAKKMVEISASD 254
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 255 LDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAIL 295
Query: 296 KGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G SK P ++N++ L D+ P K V ++A I +AI ++
Sbjct: 296 DGYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSL 352
>gi|322517656|ref|ZP_08070521.1| DNA mismatch repair protein HexB [Streptococcus vestibularis ATCC
49124]
gi|322123733|gb|EFX95318.1| DNA mismatch repair protein HexB [Streptococcus vestibularis ATCC
49124]
Length = 645
Score = 142 bits (359), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 195/400 (48%), Gaps = 51/400 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MTKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A G
Sbjct: 61 GEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAADG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + V K + E +D VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 EAYGTKLVAKAGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD G
Sbjct: 227 SDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD---------G 271
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ G + P +++++ L D+ P K V + ++A I AI + ++
Sbjct: 272 Y--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAIAQSLREQ 329
Query: 354 IAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 391
D++ DA L S+R + T L PLK
Sbjct: 330 --------DLIPDALENLAKSSTRGAAKSVQTSL---PLK 358
>gi|372208677|ref|ZP_09496479.1| DNA mismatch repair protein MutL [Flavobacteriaceae bacterium S85]
Length = 636
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 196/425 (46%), Gaps = 39/425 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGA + + ++V+DDGSG
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGAKNIHLILKDAGKTLIQVIDDGSG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S+ L ERHATSK + + +D + T GFRGEA+ASI+ ++ +E+ T+
Sbjct: 65 MSQTDARLCFERHATSK---IREAEDLFNLNTKGFRGEAMASIAAIAQVEMKTRLATEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++ SK ++ I VGT ++LF+N P RR +++S + H + + R
Sbjct: 122 GTCIQIEASKIIHQEIT--TTPVGTNTCVKNLFFNIPARRNFLKSDAVETRHIIDE-FQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+ALVHP + F M + + S + +++ FG + L + + + + G
Sbjct: 179 VALVHPDIGFA---MNHNNSEIFKLPSGNLKQRVVNIFGQKTNEKLIPIQEDTDLVSVDG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+I P S + Q+ ++N+R++ +H +N ++FD G L+ +
Sbjct: 236 FIIKPQFSKKKRGEQFFFVNNRFIKSPYLHHAIN---SAFD---------GLLEREHH-- 281
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y L L+ P D+ P KT V F + + + I+ A++ + + S D
Sbjct: 282 ---PGYFLYLKVPTHSIDINIHPTKTEVKFDNEKVLYEIIKAAVKHSLGQFNMKPSLDFS 338
Query: 363 MLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDPVELAE 422
++ E P H +P+K Q D F+ F F DP + +
Sbjct: 339 RDKNLETPY------------HYKDAPIKTPTIQVDPNFNPFKSESNFNPFDTDPKPVKK 386
Query: 423 ENTEM 427
N +
Sbjct: 387 TNVNL 391
>gi|349859114|gb|AEQ20594.1| DNA mismatch repair enzyme [uncultured bacterium CSLF42]
Length = 594
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 173/349 (49%), Gaps = 28/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M + +LPE++ + +G V+ V++ELV NS+DAGA K+ + + G ++V DD
Sbjct: 1 MPKVQKLPESLIRLIAAGEVVERPASVLKELVENSLDAGARKIAIDLWGAGRSRIRVTDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++R+ +RHATSKL DD + TFGFRGEAL SI+ VS LE+ T+
Sbjct: 61 GEGMTREDAEAALDRHATSKL---KTFDDLYNLSTFGFRGEALPSIAAVSRLELTTRPQA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+P +R ++G + L + +GTT+ +DLF+N P R K+++ + + K
Sbjct: 118 QPTAWRLTLEGGRL--LSSEAAGAPLGTTIDVQDLFFNTPARSKFLKRDSTERTR-LLKT 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGAL 238
+ I L P V F+ + M+ ++ L T S++ L ++ +G+ L ++ G
Sbjct: 175 IQEITLARPDVRFE-VCMDGKN--LYTFSTAKNLGERVADVWGLSATENLVPIDVAQGPC 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G++++ KA Q +Y+N R V + +LL H A ++ W G+
Sbjct: 232 TIRGFVNAIPAHHPTKALQLLYVNQRPVQQ----RLLTH--AVYEAYKEW-----LPVGR 280
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P +LL + L D+ P K V F D + + R IR
Sbjct: 281 H------PIFLLFITLDPKLVDVNVHPTKREVRFSDERAIYDLLFRKIR 323
Score = 47.0 bits (110), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 23/192 (11%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
++L K +I G L +IDQHAA ER+ E L + S +G A ++ +L
Sbjct: 407 RLLGVFRKLYIAAEQGEDLLLIDQHAAAERVLFERLLAQS-STQG-------APRQALLT 458
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1286
+ +++ AE +K ++ N+ G +L + L P +
Sbjct: 459 PLLWEISVARAEVVK--AYLPNLQELG-------FSLEPFGPSTFALKEWPAVLP---QS 506
Query: 1287 VDLLEFLQQLADT-DGSSTTPPSVLR--VLNSKACRGAIMFGDSLLPSECALIVEELKQT 1343
FL++L D + T +V++ + ACR AIM GD + P+E ++ +L
Sbjct: 507 KQAERFLEELLDAFEEERPTDKTVIQHQIAARAACRSAIMAGDPIAPAEIDRLLADLAAC 566
Query: 1344 SLCFQCAHGRPT 1355
C HGRPT
Sbjct: 567 ERPMTCPHGRPT 578
>gi|302023154|ref|ZP_07248365.1| DNA mismatch repair protein [Streptococcus suis 05HAS68]
Length = 645
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 170/356 (47%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRHATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H V
Sbjct: 118 SAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 173 -DVVNRLSLAHPEMAFALVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ISGY+S P + + + + ++IN RY+ ++ N L+
Sbjct: 230 DFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAILE 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 271 GYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|387625671|ref|YP_006061843.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae INV104]
gi|444383819|ref|ZP_21181999.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS8106]
gi|444385836|ref|ZP_21183905.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS8203]
gi|301793453|emb|CBW35826.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae INV104]
gi|444248262|gb|ELU54774.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS8106]
gi|444249153|gb|ELU55648.1| DNA mismatch repair protein [Streptococcus pneumoniae PCS8203]
Length = 649
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GYGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|383451382|ref|YP_005358103.1| DNA mismatch repair protein MutL [Flavobacterium indicum
GPTSA100-9]
gi|380503004|emb|CCG54046.1| DNA mismatch repair protein MutL [Flavobacterium indicum
GPTSA100-9]
Length = 619
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 174/347 (50%), Gaps = 27/347 (7%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDG 60
G I LP+ V N + +G V+ VV+ELV N+VDA AT++ + ++V+D+G
Sbjct: 3 GIIQLLPDHVANQIAAGEVVQRPASVVKELVENAVDANATEIKLIIKDAGKTLIQVIDNG 62
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
G++ L ERHATSK+ H D+ + T GFRGEALASI+ V+ +E+ TK
Sbjct: 63 KGMNVTDARLCFERHATSKIRHAEDL---FALHTKGFRGEALASIAAVAHVELKTKQDQE 119
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
G +++GSK + + K GT+ + ++LF+N P RR +++S ++ H + +
Sbjct: 120 ELGTHVIIEGSKFVSQEVAVLPK--GTSFLVKNLFFNIPARRNFLKSDNVELKHIIDEFE 177
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
R+AL HP + F I +E + S++ +++ FG + L VN + I
Sbjct: 178 -RVALAHPAIHFVLISNGAE---IFNLPSTNYRQRIVNIFGGKTNEKLVPVNEETEIITI 233
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SG++ P + ++ Q+ +N R++ +H H S A +G LK
Sbjct: 234 SGFVGKPEFAKKNRSEQFFLVNDRFIKSSFLH----HAVMS--------AYDGLLKDGNQ 281
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P+Y L L+ P D+ P KT V F D + + A + A++
Sbjct: 282 -----PSYFLYLQVPTHTIDINIHPTKTEVKFDDEQALYAILRSAVK 323
>gi|423615970|ref|ZP_17591804.1| DNA mismatch repair protein mutL [Bacillus cereus VD115]
gi|401260507|gb|EJR66680.1| DNA mismatch repair protein mutL [Bacillus cereus VD115]
Length = 650
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLMIKGGDIIKREKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP++S K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEISLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAVQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|418172585|ref|ZP_12809199.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41277]
gi|353839284|gb|EHE19358.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA41277]
Length = 649
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 205/437 (46%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + +IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISFFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|325263901|ref|ZP_08130634.1| DNA mismatch repair protein HexB [Clostridium sp. D5]
gi|324030939|gb|EGB92221.1| DNA mismatch repair protein HexB [Clostridium sp. D5]
Length = 743
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 155/276 (56%), Gaps = 9/276 (3%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ +V+ELV N++DA AT V V + ++++ D+
Sbjct: 1 MPHIQVLDQITIDKIAAGEVIERPASIVKELVENAIDARATAVVVEIQEGGISFIRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI R+ + RH+TSK+ + D+ + I + GFRGEAL+SI+ V+ +E+ITK
Sbjct: 61 GSGIVREDVPNAFLRHSTSKIRAVEDL---SHIESLGFRGEALSSIAAVTQVELITKTRE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R +++G K L +D GTT + R LFYN P RRK++++ + H ++
Sbjct: 118 DTFGTRYLIEGGKEQSL--EDTGAPDGTTFLIRQLFYNVPARRKFLKTPMTEAGH-IQDL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
++R+AL HP+VSF+FI+ + E L T + ++ S +G E + L +++ G +
Sbjct: 175 LMRLALSHPEVSFQFIN--NGQEKLRTSGNGRLKDVIYSIYGREVAANLIDMDYEKGGIR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLL 275
I+GY+ P S + F+ +IN RYV I K +
Sbjct: 233 ITGYLGKPTISRGNRNFENFFINGRYVKSSMISKAI 268
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 132/344 (38%), Gaps = 62/344 (18%)
Query: 1047 HLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKA-ENFKLSLCPHAHLGAQA 1105
+++++ A+ +P + E+ + ES T+ D +T +A EN + P
Sbjct: 426 RIREAAESRRADEQPKTGLEERPAEMIRESKTVFDPAKTEEASENLRNMSVP-------- 477
Query: 1106 EGTSIISGTKWRNGHPQTTNNNISC------------DIHNQDNILDISSGLLHLTGE-- 1151
G + + N P NIS +I+ + + L L G+
Sbjct: 478 -GLQNYNSIEKENAAPSAGEENISPGLSIPSRLSEDKEIYGDSKNPENDASLSELAGKTE 536
Query: 1152 ---FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLS 1208
F + + + K++ QV + V +L +IDQHAA ER+ L + L
Sbjct: 537 QLNLFDEKLLKREVKAEYKLIGQVFDTYWLVQFQDSLYIIDQHAAHERV----LYERTLK 592
Query: 1209 GEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI 1268
G + F Q I ++ Q + N++++ QR
Sbjct: 593 GMKN---------------------REFTSQYLSPPIILSLSMQETELLNEHMDRFQRIG 631
Query: 1269 TVI--------TLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACR 1319
I + A+P +FG+ ++ LLE L L D +S TP + + S +C+
Sbjct: 632 FEIEPFGGDEYAVRAIPDNLFGIAKKEL-LLEMLDGLTDGITTSMTPELIDEKVASMSCK 690
Query: 1320 GAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
A+ + L E ++ EL + + C HGRPT + + E
Sbjct: 691 AAVKGNNRLSAMEVDTLIGELLELDNPYHCPHGRPTIIAMTKRE 734
>gi|260063474|ref|YP_003196554.1| DNA mismatch repair protein [Robiginitalea biformata HTCC2501]
gi|88782918|gb|EAR14092.1| putative DNA mismatch repair protein [Robiginitalea biformata
HTCC2501]
Length = 623
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 167/345 (48%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LPE V N + +G V+ VV+EL+ N+VDAGA++V + V V+VVDDG G
Sbjct: 5 IKLLPEHVANQIAAGEVVQRPASVVKELLENAVDAGASRVQLIVKDGGKALVQVVDDGCG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S +L RHATSK+ +D+ + T GFRGEALASI+ ++ +E+ T+ G
Sbjct: 65 MSPADALLSFRRHATSKISEASDL---FRLHTKGFRGEALASIAAIAQVEMQTREDGAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
R + G ++ VGT++ ++LF+N P RR +++S + H +++ R
Sbjct: 122 ATRIRIAGDTV--QSREEAVAPVGTSISVKNLFFNIPARRNFLKSDKVEYRHVLEE-FQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP V+F + +SE L + + L FG + L V EI G
Sbjct: 179 VALAHPGVAFSMVHNDSEVHQLPEANLRQRIVHL---FGSRMNTRLVPVREETQLAEIDG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+I P + + QY ++N R++ +H + A G L K
Sbjct: 236 FICKPEFAKKSRGEQYFFVNDRFIRSAYLHHAI------------LTAFEGLL-----KP 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P Y L L+ P D+ P KT V F+D + + A + A++
Sbjct: 279 DTYPGYFLYLQVPAGAIDINIHPTKTEVKFEDEQSLYAILRSAVK 323
>gi|390956618|ref|YP_006420375.1| DNA mismatch repair protein MutL [Terriglobus roseus DSM 18391]
gi|390411536|gb|AFL87040.1| DNA mismatch repair protein MutL [Terriglobus roseus DSM 18391]
Length = 695
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 176/384 (45%), Gaps = 50/384 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
MG I L + V N + +G V+ VV+EL+ N+VDAGAT++ + V G +++VD+
Sbjct: 1 MGRIRVLSDQVANQIAAGEVVERPASVVKELLENAVDAGATRIRIEVEGGGRKLIRIVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ RD +L ERHATSKL DD I T GFRGEAL SI+ V+ +E+ T++
Sbjct: 61 GHGMVRDDAMLAFERHATSKL---RSADDLLHIATLGFRGEALPSIASVARVELDTRSEE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G K ++D VGTT+ RDLF+N P R+K+++S P ++ H V
Sbjct: 118 DAVGTRIEIHGGKMTK--VEDVGVPVGTTIAIRDLFFNVPARKKFLKSEPTELSH-VAAL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIE------------DFSF 227
V AL HP+ F+ + LL + L G + DF+
Sbjct: 175 VTHYALAHPEKHFEL--HSATHALLVAPAVRDASERLYQILGSDISRDMLPCAAEVDFTR 232
Query: 228 L------------DEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLL 275
D V G L + G++S P + YV++N R V +L+
Sbjct: 233 AGLPEPPPWRREEDYVAPEPGYLRVRGFVSKPELQKLNRGSIYVFVNGRQVRD----RLI 288
Query: 276 NHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDW 335
H ++++K + P LL L P + D+ P KT V F+
Sbjct: 289 LHA-----LTEAYK--------NILPPTSFPVVLLFLEMPAAEVDVNVHPAKTEVRFRQS 335
Query: 336 EPVLAFIERAIRSAWMKKIAHDSF 359
V F+ +R+ +K SF
Sbjct: 336 SFVHDFVRDTVRNTVLKARPAASF 359
>gi|149011044|ref|ZP_01832349.1| DNA mismatch repair protein [Streptococcus pneumoniae SP19-BS75]
gi|147764680|gb|EDK71610.1| DNA mismatch repair protein [Streptococcus pneumoniae SP19-BS75]
Length = 420
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEVEE--VIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|167750507|ref|ZP_02422634.1| hypothetical protein EUBSIR_01483 [Eubacterium siraeum DSM 15702]
gi|167656433|gb|EDS00563.1| DNA mismatch repair domain protein [Eubacterium siraeum DSM 15702]
Length = 677
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 185/358 (51%), Gaps = 38/358 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L ++V + +G V+ + V++ELV NS+DAGA + V + G+ Y+++
Sbjct: 1 MPEIRLLDKSVAELIAAGEVIERPSSVIKELVENSIDAGARHITVEIKHGGIS--YMRIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
DDG GI+ + RHATSK+ DD TGI T GFRGEALAS++ V+ +E++++
Sbjct: 59 DDGCGIAYAQMPTAFLRHATSKI---RTGDDLTGIMTMGFRGEALASVAAVAKIEMMSRQ 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKD----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
G G R +++G G + E + GTT+V ++LFYN P R K+++ +
Sbjct: 116 DGDELGGRYIIEG------GEEKEHESCGCPTGTTIVIKELFYNTPARLKFLKKDISEG- 168
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
+ + V R+AL HP +SF+FI + T S L+ + G + L V+
Sbjct: 169 NFIAATVDRLALSHPDISFRFI--RDNKSVRMTSGDGSLLSAAKAVSGRQFADSLIPVDF 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+ +++SGY+SSP + ++ Q ++N+RY+ K +AA ++++ N
Sbjct: 227 SLNGIDVSGYVSSPLFCRNSRSMQTFFVNTRYI------KSTTCMAA---LEEAYR--NS 275
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
+ GK PA +LN+ D+ P KT + F +PV + A+++A +
Sbjct: 276 MMVGK------FPACILNISLSPETVDVNVHPAKTEIRFAYEKPVFDAVYFAVKNALV 327
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 1166 AKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVL 1225
+V+ + K +I A L +ID+HAA ERIR E+L+ + ++ + L + EL L
Sbjct: 494 VRVIGEFLKTYILCEADEELIIIDKHAAHERIRFEKLKEEFVT----TSQLLIDKTELKL 549
Query: 1226 PEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLS 1285
Y+ L + E ++ G + L+ + + + A+P + +
Sbjct: 550 SPEEYEALHEYYEYVEQSG----------------IELVFCDDSTVQITAMPSVVKCSPQ 593
Query: 1286 DVDLLEFLQQLADTDGSSTTPPSVL--RVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1343
++ + + Q+L +T +T L +L++ AC+ AI D E + + +
Sbjct: 594 EI-VSDVAQRLMNT---ATDQKGALFDDMLHTMACKSAIKAHDDTDILELQALADRVMND 649
Query: 1344 SLCFQCAHGRPTTVPL 1359
C HGRP L
Sbjct: 650 RTIRFCPHGRPVMTAL 665
>gi|374581417|ref|ZP_09654511.1| DNA mismatch repair protein MutL [Desulfosporosinus youngiae DSM
17734]
gi|374417499|gb|EHQ89934.1| DNA mismatch repair protein MutL [Desulfosporosinus youngiae DSM
17734]
Length = 649
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 164/345 (47%), Gaps = 34/345 (9%)
Query: 13 NTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSGISRDGLVLL 71
N + +G V+ VV+ELV NS+DAGA + + V G ++V DDG+GI + L L
Sbjct: 14 NQISAGEVVERPASVVKELVENSLDAGANHIDITVEGNGVPLIRVRDDGNGIGSEDLPLA 73
Query: 72 GERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKGS 131
RHATSK+ + D+D + T GFRGEAL SI+ VS LEI ++ +P G S
Sbjct: 74 VIRHATSKITQIEDLDQ---LRTLGFRGEALPSIASVSKLEISSRPADQPAGL------S 124
Query: 132 KCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVH 187
L G +E K++ GT V RDLF+N P R K+++S+P + + V RIAL H
Sbjct: 125 LTLNAGEQEEMKEIGCPAGTCVTVRDLFFNTPARLKFLKSTPTE-FGLISDTVGRIALAH 183
Query: 188 PKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISSP 247
P ++F +L T + + G L VN + + G+IS P
Sbjct: 184 PDIAFSL--THPHQVVLQTSGRGDLREAIAAVLGHAIARQLIPVNVHHEKWHLQGFISPP 241
Query: 248 YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPA 307
S + QY IN R + + P+ L LA + K + P
Sbjct: 242 SLVRSSRQAQYFMINGR-IIRSPL--LSRALAEGYHTLIPAKLH--------------PI 284
Query: 308 YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
+L+L P S YD+ P K V FK+ + + FI A+ + +K
Sbjct: 285 AVLHLSVPPSDYDVNVHPTKMDVRFKEEQELTLFIREAVYNTLIK 329
Score = 56.6 bits (135), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 83/205 (40%), Gaps = 37/205 (18%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP-E 1227
L Q+ +I G L +IDQHAA ERI E L + E S A L + LP E
Sbjct: 464 LTQLFNTYILATDGKILLMIDQHAAHERINYERLLKEFKQAEKSSQALL-----IPLPME 518
Query: 1228 IGYQLLQNFAEQIKDWGWICN-----IHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV 1282
Q Q E + WI N + GSR++ L VP G
Sbjct: 519 FTLQEEQVLLENL----WILNEMGFILEQFGSRTY--------------LLRGVPAQTGA 560
Query: 1283 NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNS----KACRGAIMFGDSLLPSECALIVE 1338
+D + L+Q D +PP+ ++L AC+ +I DSL E ++
Sbjct: 561 FQAD----DLLRQFIDQVLLKNSPPTFDKILEEWIYMLACKESIKANDSLNLLEMEQLIA 616
Query: 1339 ELKQTSLCFQCAHGRPTTVPLVNLE 1363
L +T + C HGRPT + + E
Sbjct: 617 SLSRTQNPYTCPHGRPTMITMTRSE 641
>gi|423656629|ref|ZP_17631928.1| DNA mismatch repair protein mutL [Bacillus cereus VD200]
gi|401290370|gb|EJR96064.1| DNA mismatch repair protein mutL [Bacillus cereus VD200]
Length = 647
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 172/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEVDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|167765540|ref|ZP_02437604.1| hypothetical protein CLOSS21_00034 [Clostridium sp. SS2/1]
gi|167712725|gb|EDS23304.1| DNA mismatch repair domain protein [Clostridium sp. SS2/1]
Length = 645
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 179/358 (50%), Gaps = 34/358 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I L + + + +G V+ VV+ELV N+VDA A V V + ++V D+
Sbjct: 1 MAKIQLLDQKTIDNIAAGEVIERPASVVKELVENAVDAKANAVTVEIKDGGMTLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI +D + RHATSK+ + D+ + + GFRGEAL+SIS V+ +E++TK
Sbjct: 61 GIGIPKDQVKTAFLRHATSKIRSVEDL---LSVSSLGFRGEALSSISAVAQVELVTKTAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
+G S +Y G ++ +D+ GTT + ++LFYN P RRK+++S+ + +
Sbjct: 118 SFSGV------SYKIYGGEEEAFEDIGAPDGTTFLVKNLFYNTPARRKFLKSATTEAGY- 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
V++ ++ IAL HP++SFKFI + + T + ++ +G + L + A +
Sbjct: 171 VEQMMVHIALSHPEISFKFI--HNNKNKIYTSGNGKVKDIIYHIYGRDVAGALIPLEAQN 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
++++G+++ PY S + ++ +IN RY+ I+K + +F +
Sbjct: 229 EDVKVTGFVAKPYVSRGNRNYESYFINGRYIKSSIIYKAIEEGYRTFTMKHRY------- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P L+ + L D+ P K + F++ + + A+R+A ++K
Sbjct: 282 ----------PFVCLDFKIDQELLDVNVHPTKMEIRFRNGREIYELVVDAVRAALLQK 329
>gi|229000592|ref|ZP_04160132.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock3-17]
gi|229006014|ref|ZP_04163703.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock1-4]
gi|228755213|gb|EEM04569.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock1-4]
gi|228759147|gb|EEM08153.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock3-17]
Length = 643
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE++T
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELVTSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIMQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L + + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IRGYVTLPEVTRASRNYISTIVNGRYVRNYVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE+ ++ A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLQLIEKTLQDAFKK 327
>gi|157373934|ref|YP_001472534.1| DNA mismatch repair protein [Shewanella sediminis HAW-EB3]
gi|189030416|sp|A8FRD3.1|MUTL_SHESH RecName: Full=DNA mismatch repair protein MutL
gi|157316308|gb|ABV35406.1| DNA mismatch repair protein MutL [Shewanella sediminis HAW-EB3]
Length = 624
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 185/380 (48%), Gaps = 31/380 (8%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ V++ELV NS+DAGAT+V + + +K+ D+GS
Sbjct: 2 TIQILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIKIHDNGS 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GIS++ L L RHATSKL L D+D I +FGFRGEALASIS VS L + ++ +
Sbjct: 62 GISKEDLGLALSRHATSKLSSLDDLD---AILSFGFRGEALASISSVSRLTLTSRTADQV 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ +GS + + + VG+TV + DLF+N P RR++++S + H + + +
Sbjct: 119 EAWQAYAEGSD-MAVKVIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTH-IDEWLK 176
Query: 182 RIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
RIALV + F + + T + L L G + E+N L++
Sbjct: 177 RIALVRSDIHFTLKHNGKVVRNYRATNTQDQYLQRLAQISGKKFAEQAIEINCQHDDLKL 236
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
+GY+ SP+ QY Y+N R V +L+NH A +
Sbjct: 237 TGYVQSPFFETPASDTQYFYVNGRLVRD----RLVNH------------AVRQAFAEHET 280
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFD 360
QA +L L PH + D+ P K V F V +I +A++SA + ++ + D
Sbjct: 281 GEQASYVLMLELD-PHQV-DVNVHPAKHEVRFHQSRYVHDYIFQALQSA-LHQVGRLAID 337
Query: 361 VDMLEDAELPLESSRFQSHQ 380
D D + S QSH+
Sbjct: 338 SDNKLDTD-----SHSQSHE 352
>gi|242237985|ref|YP_002986166.1| DNA mismatch repair protein [Dickeya dadantii Ech703]
gi|242130042|gb|ACS84344.1| DNA mismatch repair protein MutL [Dickeya dadantii Ech703]
Length = 629
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 177/351 (50%), Gaps = 32/351 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ + VV+ELV NS+DAGATK+ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPSSVVKELVENSLDAGATKIDIEIERGGARLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKADLTLALARHATSK---IATLDDLEAIVSLGFRGEALASISSVSRLTLTSRTADQAE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK++++ + +H + + V R
Sbjct: 120 AWQAYAEGRE-MAVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFMH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGAL 238
IAL V+F ++ +L+ +++ + G I +FL V+ G L
Sbjct: 178 IALARFDVAF---NLHHNGKLVRQYRAATDPSQQERRLGSICGAAFLQHALAVSWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S + QY Y+N R + +LLNH +A L G+
Sbjct: 235 NIHGWVADPAGSRQLPEMQYCYVNQRMMRD----RLLNHAIR--------QAYQDQLHGE 282
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
+ PAY+L L PH + D+ P K V F V FI +A+ S
Sbjct: 283 QQ-----PAYVLYLDVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMS 327
>gi|422825318|ref|ZP_16873497.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK678]
gi|324995820|gb|EGC27731.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK678]
Length = 648
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 206/445 (46%), Gaps = 54/445 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 2 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEDAGLKSIQVTDN 61
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 62 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFIIETATEA 118
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 119 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 173
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 174 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 230
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 231 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 271
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 272 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ- 330
Query: 355 AHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S + Q+S L + L +Q D + +++
Sbjct: 331 -------DLIPDALENLAKSTVKRANKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQL 383
Query: 409 TFQEFQKDPVELAEENTEMEFFSQP 433
+F+E + E +E E SQP
Sbjct: 384 SFEESAEPVHEATDEKAE----SQP 404
>gi|336053623|ref|YP_004561910.1| DNA mismatch repair protein mutL [Lactobacillus kefiranofaciens
ZW3]
gi|333957000|gb|AEG39808.1| DNA mismatch repair protein mutL [Lactobacillus kefiranofaciens
ZW3]
Length = 632
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 175/363 (48%), Gaps = 35/363 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ F+ G+ V+
Sbjct: 1 MPKIHELSENLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFIDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI+RD + L RHATSK+ + D+ + T GFRGEALASIS VS +EIIT
Sbjct: 59 DNGTGIARDQVDLAFTRHATSKINNEHDL---FKVATLGFRGEALASISAVSHVEIITAT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G G R G G +D GT + +DLF+N P R KY++ SP+ +
Sbjct: 116 EGAI-GVRATFSGGN--KKGQEDSAARQGTKITVKDLFFNTPARLKYLR-SPRTETMKIV 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R++L +P VSF + + +L T + + + + +G ++E A D
Sbjct: 172 DIINRLSLGYPHVSFTLSN--TGKVILRTTGNGNLKQTVANVYGRHIAEGMEEFQAKDSD 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+I+G +S P + S + F + +N RY+ +++ N + G
Sbjct: 230 FKINGLMSKPSLTRSTRNFISILLNGRYI-------------------KNFQLNTAIMDG 270
Query: 298 KRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
SK A P +L + L D+ P K V + + I AI +A ++K+
Sbjct: 271 YGSKLAARHYPIVVLAIHVDPLLVDVNVHPTKQEVRLSKEKELSRLITSAISNALVEKVE 330
Query: 356 HDS 358
S
Sbjct: 331 QTS 333
>gi|291557074|emb|CBL34191.1| DNA mismatch repair protein MutL [Eubacterium siraeum V10Sc8a]
Length = 677
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 185/358 (51%), Gaps = 38/358 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L ++V + +G V+ + V++ELV NS+DAGA + V + G+ Y+++
Sbjct: 1 MPEIRLLDKSVAELIAAGEVIERPSSVIKELVENSIDAGARHITVEIKHGGIS--YMRIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
DDG GI+ + RHATSK+ DD TGI T GFRGEALAS++ V+ +E++++
Sbjct: 59 DDGCGIAYAQMPTAFLRHATSKI---RTGDDLTGIMTMGFRGEALASVAAVAKIEMMSRQ 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKD----VGTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
G G R +++G G + E + GTT+V ++LFYN P R K+++ +
Sbjct: 116 DGDELGGRYIIEG------GEEKEHESCGCPTGTTIVIKELFYNTPARLKFLKKDISEG- 168
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
+ + V R+AL HP +SF+FI + T S L+ + G + L V+
Sbjct: 169 NFIAATVDRLALSHPDISFRFI--RDNKSVRMTSGDGSLLSAAKAVSGRQFADSLIPVDF 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+ +++SGY+SSP + ++ Q ++N+RY+ K +AA ++++ N
Sbjct: 227 SLNGIDVSGYVSSPLFCRNSRSMQTFFVNTRYI------KSTTCMAA---LEEAYR--NS 275
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
+ GK PA +LN+ D+ P KT + F +PV + A+++A +
Sbjct: 276 MMVGK------FPACILNISLSPETVDVNVHPAKTEIRFAYEKPVFDAVYFAVKNALV 327
Score = 45.4 bits (106), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 26/196 (13%)
Query: 1166 AKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVL 1225
+V+ + K +I AG L +ID+HAA ERIR E+L+ + ++ + L + EL L
Sbjct: 494 VRVIGEFLKTYILCEAGEELIIIDKHAAHERIRFEKLKEEFVT----TSQLLIDKTELKL 549
Query: 1226 PEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLS 1285
Y+ L + E ++ G + L+ + + + A+P + +
Sbjct: 550 SPEEYEALHEYYEYVEQSG----------------IELVFCDDSTVQITAMPSVVKCSPQ 593
Query: 1286 DVDLLEFLQQLADTDGSSTTPPSVL--RVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1343
++ + + Q+L +T +T L +L++ AC+ AI D E + + +
Sbjct: 594 EI-VSDVAQRLMNT---ATDQKGALFDDMLHTMACKSAIKAHDDTDILELQALADRVMND 649
Query: 1344 SLCFQCAHGRPTTVPL 1359
C HGRP L
Sbjct: 650 RTIRFCPHGRPVMTAL 665
>gi|326798889|ref|YP_004316708.1| DNA mismatch repair protein mutL [Sphingobacterium sp. 21]
gi|326549653|gb|ADZ78038.1| DNA mismatch repair protein mutL [Sphingobacterium sp. 21]
Length = 620
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 176/350 (50%), Gaps = 27/350 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+AV N + +G V+ V+EL+ N++DAGA K+ + V ++V+D+G G
Sbjct: 5 IQLLPDAVANQIAAGEVVQRPASAVKELIENAIDAGADKIQLIVKDAGKSLIQVIDNGCG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK L +D I T GFRGEA+ASI+ ++ +E+ T+ H
Sbjct: 65 MSVTDARLCFERHATSK---LRKAEDLFAIRTMGFRGEAMASIAAIAHVELKTRRHEDEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G +++GS+ + + GT++ ++LF+N P RR +++S+P ++ H +++ R
Sbjct: 122 GTCIMIEGSEI--INQEPTATPAGTSICVKNLFFNTPARRNFLKSNPVEMRHIIEE-FQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IAL HPK+ F + S+ + S +I FG L V + + ++G
Sbjct: 179 IALAHPKI---FFSLHSDGNEVFHLPSEGLKQRIIHIFGSNYNQRLVPVEESTTIINLNG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+I P + + QY ++N+R++ K P LNH A L S
Sbjct: 236 FIGKPEYAKKTRGEQYFFVNNRFI-KDP---YLNHAV--------LNAYEEIL-----PS 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
++ P Y+L + + D+ P KT + ++D + A I A++ + K
Sbjct: 279 ESYPLYVLFIEIDPAQIDVNVHPTKTEIKYQDERSIYAIIRSAVKRSLGK 328
>gi|423511801|ref|ZP_17488332.1| DNA mismatch repair protein mutL [Bacillus cereus HuA2-1]
gi|402450062|gb|EJV81896.1| DNA mismatch repair protein mutL [Bacillus cereus HuA2-1]
Length = 647
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 172/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|423488891|ref|ZP_17465573.1| DNA mismatch repair protein mutL [Bacillus cereus BtB2-4]
gi|423494616|ref|ZP_17471260.1| DNA mismatch repair protein mutL [Bacillus cereus CER057]
gi|423498593|ref|ZP_17475210.1| DNA mismatch repair protein mutL [Bacillus cereus CER074]
gi|401151677|gb|EJQ59123.1| DNA mismatch repair protein mutL [Bacillus cereus CER057]
gi|401159251|gb|EJQ66636.1| DNA mismatch repair protein mutL [Bacillus cereus CER074]
gi|402433246|gb|EJV65300.1| DNA mismatch repair protein mutL [Bacillus cereus BtB2-4]
Length = 647
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 172/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|423598920|ref|ZP_17574920.1| DNA mismatch repair protein mutL [Bacillus cereus VD078]
gi|401237190|gb|EJR43647.1| DNA mismatch repair protein mutL [Bacillus cereus VD078]
Length = 647
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 172/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229134576|ref|ZP_04263386.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST196]
gi|423669344|ref|ZP_17644373.1| DNA mismatch repair protein mutL [Bacillus cereus VDM034]
gi|423674528|ref|ZP_17649467.1| DNA mismatch repair protein mutL [Bacillus cereus VDM062]
gi|228648837|gb|EEL04862.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST196]
gi|401298471|gb|EJS04071.1| DNA mismatch repair protein mutL [Bacillus cereus VDM034]
gi|401310079|gb|EJS15412.1| DNA mismatch repair protein mutL [Bacillus cereus VDM062]
Length = 647
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 172/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229168508|ref|ZP_04296231.1| DNA mismatch repair protein mutL [Bacillus cereus AH621]
gi|423592289|ref|ZP_17568320.1| DNA mismatch repair protein mutL [Bacillus cereus VD048]
gi|228614914|gb|EEK72016.1| DNA mismatch repair protein mutL [Bacillus cereus AH621]
gi|401230531|gb|EJR37038.1| DNA mismatch repair protein mutL [Bacillus cereus VD048]
Length = 647
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 172/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|229012952|ref|ZP_04170117.1| DNA mismatch repair protein mutL [Bacillus mycoides DSM 2048]
gi|423661392|ref|ZP_17636561.1| DNA mismatch repair protein mutL [Bacillus cereus VDM022]
gi|228748206|gb|EEL98066.1| DNA mismatch repair protein mutL [Bacillus mycoides DSM 2048]
gi|401301433|gb|EJS07022.1| DNA mismatch repair protein mutL [Bacillus cereus VDM022]
Length = 647
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 172/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|210612718|ref|ZP_03289433.1| hypothetical protein CLONEX_01635 [Clostridium nexile DSM 1787]
gi|210151411|gb|EEA82419.1| hypothetical protein CLONEX_01635 [Clostridium nexile DSM 1787]
Length = 663
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 193/416 (46%), Gaps = 34/416 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ +++ELV N++DAGA+ V V + ++++ D+
Sbjct: 1 MANIQVLDQITIDKIAAGEVIERPASIIKELVENAIDAGASAVTVEIKEGGISFIRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI ++ + L RH+TSK+ +DD T + + GFRGEAL+SI+ ++ +E+ITK
Sbjct: 61 GCGIPKEEVPLAFLRHSTSKI---RSVDDLTTVASLGFRGEALSSIAAIAQVELITKTKD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R ++G I+D GTT + +FYN P RRK++++ + H V +
Sbjct: 118 EVTGTRYRIEGGA--EKAIEDTGAPDGTTFLVHQIFYNTPARRKFLKTPMTEASH-VSEL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL HP+VS +FI+ + E L T + ++ FG + + L E N ++
Sbjct: 175 MTRLALSHPEVSIQFIN--NGQEKLHTSGNGKLKDIIYHVFGRDIANNLLETNERIDGIQ 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ G+I P S + ++ +IN RYV I K + F +
Sbjct: 233 VQGFIGKPIISRGNRNYENYFINGRYVKSNIIAKAIEDAYKDFTMQHKY----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P L+ + D+ P K + F + + V FI A++ +
Sbjct: 282 ------PFTALHFTMDGTDLDVNVHPTKMELRFSNQQGVYNFIYNALKQTLSE--PELIP 333
Query: 360 DVDMLEDAELPLESSRFQSHQSSTHL------HSSPLKNLAKQRDHMFHKECERIT 409
V++ E E+P+++ + + + +P+ K D+ K ER+T
Sbjct: 334 RVELPEAKEVPVKAEKIVERKQEQPMTPVREERKTPVIEEEKNLDYFMKKMRERVT 389
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 35/222 (15%)
Query: 1151 EFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGE 1210
+FF + K ++ K++ Q+ + + V L +IDQHAA ER+ L K L G
Sbjct: 459 DFFEEKLLTKKAAQEYKIIGQLFETYWLVEFHEQLYIIDQHAAHERV----LYEKTLRGM 514
Query: 1211 GKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV 1270
+ F Q I N+ Q + N ++++
Sbjct: 515 KD---------------------REFTSQYLSPPIILNLSMQEEEALNTHMDIFTNIGFE 553
Query: 1271 I--------TLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGA 1321
I + AVP +F + ++ E L QL D SS P V + S +C+ A
Sbjct: 554 IEPFGGDSYAIRAVPDNLFSIAKREL-FTEMLDQLVDGIHSSLAPDIVAEKVASMSCKAA 612
Query: 1322 IMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
+ L +E ++ EL + + C HGRPT + + E
Sbjct: 613 VKGNSRLSAAEVETLIGELLELENPYHCPHGRPTIIAMTKRE 654
>gi|417940630|ref|ZP_12583918.1| DNA mismatch repair protein [Streptococcus oralis SK313]
gi|343389511|gb|EGV02096.1| DNA mismatch repair protein [Streptococcus oralis SK313]
Length = 649
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 201/437 (45%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTMVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + + +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLIARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + + +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIAIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ITGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++ + AI K +
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMTLVSEAI----AKSLKEQ 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R E
Sbjct: 330 TLIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSRPCQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL EE ++ F++
Sbjct: 380 HQVELTEEGRDLTLFAK 396
>gi|392531927|ref|ZP_10279064.1| DNA mismatch repair protein [Carnobacterium maltaromaticum ATCC
35586]
Length = 707
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 190/393 (48%), Gaps = 37/393 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ + + ++++D+
Sbjct: 1 MGKIVELSEKLANQIAAGEVIERPASVVKELVENAIDAGSTQIDILIEEAGLKKIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G+GI+ D + +RHATSK + DD I T GFRGEAL SI+ VS + + T A G
Sbjct: 61 GAGIAADDVRNAFKRHATSK---IHSRDDLFRIRTLGFRGEALPSIASVSEITLET-ATG 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G +KG + + RK GT++ +LF+N P R KY+++ + L ++
Sbjct: 117 VGAGSYLALKGGDIVEERANPARK--GTSITVENLFFNTPARLKYVKTIQTE-LATIGDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+A+ + +V+F+ + +++L T + L +G+ + EV D +
Sbjct: 174 VNRLAMSNTQVAFRLV--HDGNQMLRTMGNGDLKQTLAGIYGVSVAKKMREVEKEDLDFK 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ GY+S P + + + + + IN RY+ ++ N + G R
Sbjct: 232 LKGYVSLPELTRASRNYMSIMINGRYI-------------------KNYLLNKAIVAGYR 272
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P L+++ L D+ P K V + ++ IE AI ++H+
Sbjct: 273 SKLMVGRFPFVCLDIQMDPLLVDVNVHPTKQEVRISKEKELMELIETAIHEC----LSHE 328
Query: 358 SFDVDMLEDAEL--PLESSRFQSHQSSTHLHSS 388
+ LE+ P ++SRFQS Q+ L +S
Sbjct: 329 QLIPESLENFSFKRPYDASRFQSEQTKIDLTAS 361
>gi|407473974|ref|YP_006788374.1| DNA mismatch repair protein MutL [Clostridium acidurici 9a]
gi|407050482|gb|AFS78527.1| DNA mismatch repair protein MutL [Clostridium acidurici 9a]
Length = 642
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 180/357 (50%), Gaps = 42/357 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I L E N + +G V+ + VV+ELV NS+DA +T + + + Y++V D+G G
Sbjct: 5 IKLLDEKTINKIAAGEVVERPSSVVKELVENSIDAQSTSITIEIISGGKKYIRVTDNGVG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
IS+ + L RH+TSK+ + D+ + T GFRGEALASIS VS LE+ITK +
Sbjct: 65 ISKKDIELAFLRHSTSKISKVEDLG---SVNTLGFRGEALASISAVSQLEVITKTSSDLS 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + ++ G G+ E+ DV GTT++ R+LFYN PVR+K+++S + + +
Sbjct: 122 GVKAIING------GVVREKLDVGCPKGTTLIVRNLFYNVPVRQKFLKSEGTEASY-ISD 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSS----SSPLALLISSFGIEDFSFLDEVNAN 234
V ++AL +P +SF +I + +++ T + S+ +LL SF F E N
Sbjct: 175 IVYKLALSNPAISFNYI--KDNKQIVKTPGNGDMKSTVYSLLGKSFLDSTFELCSEAN-- 230
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
++I G IS+ + ++ QY+++N RY+ I + DS++
Sbjct: 231 --GIKIHGLISNTSFTRGNRSSQYIFVNGRYIKDENISR---------SVEDSYRT---- 275
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
S P +L+ + D+ P KT V F + + + F+ +++ +
Sbjct: 276 ----VIPSNRYPVFLIFIDIDSINLDVNVHPTKTEVRFSNKDIINKFLYNSVKDTLL 328
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 19/181 (10%)
Query: 1183 GTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKD 1242
TL +IDQHAA ERI E+ ++++ E + V Y+ Q L+LPE+ L Q + +++
Sbjct: 473 NTLYLIDQHAAHERIMYEKFKYQL---ENQDV-YI---QSLMLPEV-INLSQKEIDLVRE 524
Query: 1243 WGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGS 1302
N+ T FN + + I L VP +FG S LL+ + L D G
Sbjct: 525 -----NLSTFTKLGFN----MEEFGNNAIILRGVPLVFGNPNSKTLLLDIIDNLED--GV 573
Query: 1303 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1362
+ +L + AC AI D++ E ++E+L+ T F C HGRP + + N
Sbjct: 574 KSNYDLLLEKIMKLACTSAIKAKDNIEDIEIEKLMEDLELTEEPFTCPHGRPIIIEITNY 633
Query: 1363 E 1363
E
Sbjct: 634 E 634
>gi|422824602|ref|ZP_16872789.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK405]
gi|422856695|ref|ZP_16903351.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1]
gi|422866535|ref|ZP_16913160.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1058]
gi|324992651|gb|EGC24572.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK405]
gi|327460054|gb|EGF06393.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1]
gi|327488644|gb|EGF20444.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1058]
Length = 688
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 206/445 (46%), Gaps = 54/445 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 42 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEDAGLKSIQVTDN 101
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 102 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFIIETATEA 158
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 159 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 213
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 214 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 270
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 271 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 311
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 312 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ- 370
Query: 355 AHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S + Q+S L + L +Q D + +++
Sbjct: 371 -------DLIPDALENLAKSTVKRANKPEQTSLPLKENRLYYDKEQNDFFLKPQVAEQQL 423
Query: 409 TFQEFQKDPVELAEENTEMEFFSQP 433
+F+E + E +E E SQP
Sbjct: 424 SFEESAEPVHEATDEKAE----SQP 444
>gi|354806702|ref|ZP_09040183.1| DNA mismatch repair protein mutL [Lactobacillus curvatus CRL 705]
gi|354514886|gb|EHE86852.1| DNA mismatch repair protein mutL [Lactobacillus curvatus CRL 705]
Length = 649
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 177/355 (49%), Gaps = 41/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L E + N + +G V+ VV+EL N++DA +T++ + + ++V+D+
Sbjct: 1 MGKIHELSEILSNQIAAGEVIERPASVVKELAENAIDANSTQIDIVIEQAGLQLIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + +RHATSK +A D I + GFRGEALASI+ VS L I T A
Sbjct: 61 GDGIEPEDVPTAFKRHATSK---IATRQDLFKIQSLGFRGEALASIASVSDLTIET-ATA 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
G KG G+ +E+K GT + RDLF+N P R KY+++ + L +
Sbjct: 117 DSLGTFAHFKG------GVLEEQKTNPIRPGTAITVRDLFFNTPARLKYVKTFQTE-LAN 169
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAN 234
V V R+A+ HP+++F + ++D LL + ++ L I+ +G+ L V+A
Sbjct: 170 VIDIVNRLAMSHPQIAFT---LTNDDHLLLKTAGNNDLQQTIAGIYGVTMAKQLLPVSAE 226
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
D +++GY+S P + + + + V IN RY+ +++ N
Sbjct: 227 DLDFKLTGYVSLPKLTRASRNYISVLINGRYI-------------------KNYQLNKAI 267
Query: 295 LKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+KG SK P +LN++ L D+ P K V ++A IE+AIR
Sbjct: 268 IKGYGSKLMVGRYPVVVLNIQMNPLLIDVNVHPTKQEVRLSKEPALMALIEKAIR 322
>gi|188586123|ref|YP_001917668.1| DNA mismatch repair protein MutL [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350810|gb|ACB85080.1| DNA mismatch repair protein MutL [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 680
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 173/349 (49%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG IN L + + +G V+ VV+EL+ NS+DAG+ + +++ ++V+D+
Sbjct: 1 MGRINILRHEISEKIAAGEVVERPASVVKELIENSIDAGSDNIQIFLSKAGKELIRVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ + D+D I T GFRGEALASI+ VS +E+ T+ H
Sbjct: 61 GLGIHPEDVELAFSRHATSKVNSIKDLDK---INTLGFRGEALASIAAVSKIEMNTRRHD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYM--QSSPKKVLHSVK 177
G R ++ K G GT + +DLFYN P R K++ +S+ ++H +
Sbjct: 118 SKEGTRVFLEEGKVQQRG--SAGCPPGTDIAVKDLFYNTPARLKFLSKESTEIALIHDI- 174
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ + AL +P + F+ ++ +LL T + L ++ + +G + L + +
Sbjct: 175 --INKFALANPNIRFRALN--GNKKLLQTSGRNDMLEVIANIYGYQTAKKLLPIKYSQDG 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ I+GYI+ P + S +++Q ++N RYV ++F K + L
Sbjct: 231 ITITGYIAKPELTRSNRSYQTFFVNDRYV------------KSTFLSERLEKGYHTLLPK 278
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
R P +L L+ P + D+ P K HV F + + + + +A+
Sbjct: 279 HR-----YPFSILKLQVPDEILDVNVHPAKIHVRFINEKQIGNMLTKAV 322
Score = 46.6 bits (109), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 1163 LEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQE 1222
L + +V+ Q+ + + + + +IDQHAA ERI + L + S + KS + E
Sbjct: 490 LLEYRVVGQIFTTYWILESSDEIYLIDQHAAHERINYQLLMDRYRSSQLKSQQVIPYTLE 549
Query: 1223 LVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV 1282
L G L++ ++++ G Q + LL R + A+ IF
Sbjct: 550 L--DSAGITALEDNLDKLRQCGLEFEFFGQNT--------LLVRGVP----FAIKDIFDQ 595
Query: 1283 NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQ 1342
+ + DL++ L + D D T S+ +L + AC+ +I + + E +++ L +
Sbjct: 596 D-AIYDLIDQLIKHPDNDLDIT---SLEEMLITIACKKSIKANEKIGAKELKSLLKSLVE 651
Query: 1343 TSLCFQCAHGRPTTVPLV 1360
T F C HGRPT + L
Sbjct: 652 TPTPFTCPHGRPTIINLT 669
>gi|158320585|ref|YP_001513092.1| DNA mismatch repair protein [Alkaliphilus oremlandii OhILAs]
gi|158140784|gb|ABW19096.1| DNA mismatch repair protein MutL [Alkaliphilus oremlandii OhILAs]
Length = 616
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 187/369 (50%), Gaps = 38/369 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDDGSG 62
I L + N + +G V+ VV+ELV N++DA ++ + + + Y+++ D+G G
Sbjct: 5 IRLLDDLTINKIAAGEVVESPHSVVKELVENAIDAASSAIILEIQEGGKKYIRITDNGVG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + + RH+TSK+ H+ D+ + + + GFRGEALASI+ V+ +E+IT+ G+ +
Sbjct: 65 IKEEYVEAAFMRHSTSKIAHIEDL---SRVESLGFRGEALASIAAVAQVEMITRPEGQQH 121
Query: 123 GYRKVMKGSKCLYLGIDDERK---DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + G K ++ +K VGTT++ ++LF+N P R K+++S+ + + + +
Sbjct: 122 GVLIHINGGK-----VETIKKVGCPVGTTIIVKNLFFNTPARLKFLKSNNGETM-KITEI 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDGAL 238
+ R++L +P +SFK+I+ + ++ T ++ L+ ++S F E F L + + +
Sbjct: 176 ITRLSLSNPSISFKYIN---NNNIMFTTPGNNMLSQAILSVFNKETFKNLILLEDHQEGM 232
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ GYI P + Q V+IN RYV I + A + N
Sbjct: 233 TLHGYIGQPSFVRGNRNLQIVFINGRYVKNKVISR-----AIEVAYKEKIMINK------ 281
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
P +LNL+ S+ D+ P K V F+D E V FI +AI A K+ S
Sbjct: 282 ------YPICILNLKIHPSVLDVNVHPAKIEVKFEDEEKVYHFILKAILKALEKQ----S 331
Query: 359 FDVDMLEDA 367
+MLE A
Sbjct: 332 IVPNMLELA 340
Score = 45.1 bits (105), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 26/210 (12%)
Query: 1153 FIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGK 1212
+ S S L+ ++ Q+ +I + G++ +IDQHAA ER+ R ++ E
Sbjct: 417 IVQSSFLNSLLDRYHIVGQIFSTYIILENEGSMYLIDQHAAHERLLYNTFRQEI-KAEKV 475
Query: 1213 SVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVIT 1272
+ L A L L + Y L N + G+ +F N +++ RQ
Sbjct: 476 ASQRLLAPMVLELSKEDYMFLLNHLYIFEKLGF-------EIENFGGN-DIIIRQ----- 522
Query: 1273 LLAVPCIFG--VNLSDV-DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLL 1329
VP I G N S + ++L+ +++ D + + KAC+ AI D +
Sbjct: 523 ---VPMILGRPQNFSFIYEILDEVRKYNDVNAMFED------TIAKKACKEAIKANDKMD 573
Query: 1330 PSECALIVEELKQTSLCFQCAHGRPTTVPL 1359
E ++E+L + + C HGRP + +
Sbjct: 574 SIEIRKLIEDLSKLTPPLTCPHGRPIILAM 603
>gi|403411875|emb|CCL98575.1| predicted protein [Fibroporia radiculosa]
Length = 912
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 175/381 (45%), Gaps = 44/381 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I+ LP ++ +RS +L +++ ELV NS+DAGA ++ + V + V DDG GI
Sbjct: 12 IHPLPSETQSKLRSTQILTSFPQIISELVQNSLDAGAKQIDIGVDCEDWACWVRDDGVGI 71
Query: 64 SRDGL-VLLG----ERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 118
RD VL G R+ TSK A +D + TFGFRGEALAS +D+S LEI ++
Sbjct: 72 GRDSFDVLAGGSEAGRYGTSKAYSSASLDQ---VSTFGFRGEALASAADLSCLEISSRTA 128
Query: 119 GRPNGYRKVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQ-----------------P 159
+ ++KG LY G + R GT V RD FYN P
Sbjct: 129 RSRESWSVILKGRAVLYNGPSVRWRRDTPGTVVFVRDAFYNVRQSVLTVSLGTDDPRKLP 188
Query: 160 VRRKYMQSSPKKVLHSVKKCVLRIALVHPKVSFKFIDMESEDE-------LLCTCSSSSP 212
+RR SP + + +++ V +L+ P VSF F + E ++ +SS
Sbjct: 189 IRR-LSHPSPVRTIELIRRDVETSSLMFPNVSFTFENSHKAKEGDPGKGRIMTVPRTSSS 247
Query: 213 LALLISSFGIEDFSFLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIH 272
LA +G ++E++ D + + G+IS D KA+Q++YIN + +H
Sbjct: 248 LATFRHLYGKALAQHIEEIDETDDQMRLHGFIS--LDGAQSKAYQFLYINRHILSPCDLH 305
Query: 273 KLLN-------HLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDP 325
+L++ + +FD L+ KS+ PA++LNL P L D +P
Sbjct: 306 RLIDAQFSKSSFMKHAFDEEGETSQPRLNLRRSPRKSEKKPAFVLNLTVPPRLVDNCIEP 365
Query: 326 LKTHVVFKDWEPVLAFIERAI 346
K V ++ F+ I
Sbjct: 366 AKASVQLQNSGAASKFLGNVI 386
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 115/276 (41%), Gaps = 73/276 (26%)
Query: 1155 PDSINKSCLEDAKVLQQVDKKFIPVV------AGGTLAVIDQHAADERIRLEELRHKVLS 1208
P NK+ L DA++L QVD+KFI + G L +IDQHAADER+R+E ++
Sbjct: 613 PGRFNKTALHDAEILGQVDRKFIACMLAAECDKGKALVLIDQHAADERVRVERFLKELCL 672
Query: 1209 G-----------EGKSVAYLDAEQELVLPEIGYQ----LLQNFAEQI---------KDWG 1244
G G + L ++ + + E+ + L ++ E++ K WG
Sbjct: 673 GFLQGYPPSHASAGDTTDLLSGQRSVTVRELVHPVPVLLTRHEVEKLAAGDVQVAFKLWG 732
Query: 1245 WICNIHTQGSRSF--------NKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQ- 1295
+ SF + + QR + + VP + L D L+ L +
Sbjct: 733 LAFTRLDEALESFADPFADKVGDDGSGCQRDYVQVHVRTVPEVVADKLLAGDELKDLVKG 792
Query: 1296 -LADTDGSSTTPPS----------------------------VLRVLNSKACRGAIMFGD 1326
LA D PS +L ++NSKACRGAIMF D
Sbjct: 793 YLAKLDAEGAPMPSASQLKSGDPSACEEGAEWQKAMRWCPRELLELVNSKACRGAIMFND 852
Query: 1327 SLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1362
L +C +V+ L QT+L FQ P+ VPL ++
Sbjct: 853 PLTLDQCTSLVQRLAQTALPFQ-----PSLVPLADV 883
>gi|414084244|ref|YP_006992952.1| DNA mismatch repair MutL family protein [Carnobacterium
maltaromaticum LMA28]
gi|412997828|emb|CCO11637.1| DNA mismatch repair MutL family protein [Carnobacterium
maltaromaticum LMA28]
Length = 707
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 190/393 (48%), Gaps = 37/393 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ + + ++++D+
Sbjct: 1 MGKIVELSEKLANQIAAGEVIERPASVVKELVENAIDAGSTQIDILIEEAGLKKIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G+GI+ D + +RHATSK + DD I T GFRGEAL SI+ VS + + T A G
Sbjct: 61 GAGIAADDVRNAFKRHATSK---IHSRDDLFRIRTLGFRGEALPSIASVSEITLET-ATG 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G +KG + + RK GT++ +LF+N P R KY+++ + L ++
Sbjct: 117 VGAGSYLALKGGDIVEERANPARK--GTSITVENLFFNTPARLKYVKTIQTE-LATIGDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+A+ + +V+F+ + +++L T + L +G+ + EV D +
Sbjct: 174 VNRLAMSNMQVAFRLV--HDGNQMLRTMGNGDLKQTLAGIYGVSVAKKMREVEKEDLDFK 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ GY+S P + + + + + IN RY+ ++ N + G R
Sbjct: 232 LKGYVSLPELTRASRNYMSIMINGRYI-------------------KNYLLNKAIVAGYR 272
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P L+++ L D+ P K V + ++ IE AI ++H+
Sbjct: 273 SKLMVGRFPFVCLDIQMDPLLVDVNVHPTKQEVRISKEKELMELIETAIHEC----LSHE 328
Query: 358 SFDVDMLEDAEL--PLESSRFQSHQSSTHLHSS 388
+ LE+ P ++SRFQS Q+ L +S
Sbjct: 329 QLIPESLENFSFKRPYDASRFQSEQTKIDLTAS 361
>gi|88803291|ref|ZP_01118817.1| putative DNA mismatch repair protein [Polaribacter irgensii 23-P]
gi|88780857|gb|EAR12036.1| putative DNA mismatch repair protein [Polaribacter irgensii 23-P]
Length = 604
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 169/343 (49%), Gaps = 28/343 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGAT + + ++V+DDG G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELIENAIDAGATNIKLLLKDAGKTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ D+ + T GFRGEALASI+ +S +E+ TK
Sbjct: 65 MSATDARMSFERHATSKIQKAEDL---FNLNTKGFRGEALASIAAISHVELKTKRSDDEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++GSK + K GT+ ++LFYN P RR +++S + H + + R
Sbjct: 122 GTGIKIEGSKVISQDFISTGK--GTSFAVKNLFYNIPARRNFLKSDTVETRHIIDEF-QR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP +SF + + + + +++ FGI+ L +N + I G
Sbjct: 179 VALAHPDISFL---LHHNNNEIYHLKEGNLRQRIVAVFGIKMNEKLVPINEKTDLVAIQG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+I+ P S + Q+ ++N+R++ LNH S A +G L +S
Sbjct: 236 FIAKPEFSKRKRGEQFFFVNNRFIKSS----YLNHAVVS--------AFDGLL-----ES 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 345
A P+Y L L P + D+ P KT + F D E VL I RA
Sbjct: 279 GAHPSYFLYLTVPANSIDINIHPTKTEIKF-DNEKVLYAILRA 320
>gi|356538391|ref|XP_003537687.1| PREDICTED: DNA mismatch repair protein MLH3-like [Glycine max]
Length = 102
Score = 142 bits (357), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/95 (73%), Positives = 78/95 (82%), Gaps = 4/95 (4%)
Query: 1306 PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1365
PPSVLRVLN KACRGAIMFGDSLLPSEC+ IVEELK TSLCFQCAHGRP TVPLVNLEAL
Sbjct: 2 PPSVLRVLNLKACRGAIMFGDSLLPSECSFIVEELKHTSLCFQCAHGRPATVPLVNLEAL 61
Query: 1366 HKQIAQL----NNSSELWHGLHRGEISLKRASRRL 1396
H QIA+L SS+ HGL R + ++RA++RL
Sbjct: 62 HNQIAKLRLMNECSSDECHGLRRHTVRVERAAQRL 96
>gi|423469981|ref|ZP_17446725.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6O-2]
gi|402437233|gb|EJV69257.1| DNA mismatch repair protein mutL [Bacillus cereus BAG6O-2]
Length = 648
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 171/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIRQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE ++ + K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQDTFKK 327
>gi|225018515|ref|ZP_03707707.1| hypothetical protein CLOSTMETH_02462 [Clostridium methylpentosum
DSM 5476]
gi|224948716|gb|EEG29925.1| hypothetical protein CLOSTMETH_02462 [Clostridium methylpentosum
DSM 5476]
Length = 645
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 180/355 (50%), Gaps = 28/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
M I+ L +AV + +G V+ +V+EL+ NS+D+GAT V V + +++ D+
Sbjct: 1 MPQIHLLDKAVSELIAAGEVIERPASIVKELLENSIDSGATSVTVEIKTGGKQLIRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GIS D + RHATSK+ D++ I T GFRGEALASI VS +E++TK
Sbjct: 61 GCGISPDDVPKAFLRHATSKIQTEPDLEH---IATLGFRGEALASICAVSKIELLTKTAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + S +++ GTT++ R++FY+ P R K+++ + ++++
Sbjct: 118 EQFGTRYTI--SGGEGGELEETGCPDGTTILVREIFYDVPARLKFLKKDVTEG-NAIQSI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V +IAL HP++S KF + +L T + +++ + FG E S L V+ G+
Sbjct: 175 VDKIALSHPEISIKF--LRDGKRVLNTPGNGDRFSVIHAVFGREFASTLMPVDYKAGSFP 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG-FLKGK 298
++G+ S P S + ++ Q+ +IN RYV + C+ +A G + GK
Sbjct: 233 VNGFASVPMKSRANRSMQHFFINGRYV------------KSKTCCTALEEAYKGSIMVGK 280
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
PA +LNL P + D+ P K V F D V + A++SA ++
Sbjct: 281 ------FPACVLNLELPFEMVDVNVHPSKIEVRFTDERAVFEAVYFAVKSAIAQQ 329
>gi|317498493|ref|ZP_07956787.1| DNA mismatch repair protein MutL [Lachnospiraceae bacterium
5_1_63FAA]
gi|316894186|gb|EFV16374.1| DNA mismatch repair protein MutL [Lachnospiraceae bacterium
5_1_63FAA]
Length = 495
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 178/358 (49%), Gaps = 34/358 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I L + + + +G V+ VV+ELV N+VDA A V V + ++V D+
Sbjct: 1 MAKIQLLDQKTIDNIAAGEVIERPASVVKELVENAVDAKANAVTVEIKDGGMTLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI +D + RHATSK+ + D+ + + GFRGEAL+SIS V+ +E++TK
Sbjct: 61 GIGIPKDQVKTAFLRHATSKIRSVEDL---LSVSSLGFRGEALSSISAVAQVELVTKTAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
+G S +Y G ++ D+ GTT + ++LFYN P RRK+++S+ + +
Sbjct: 118 SFSGV------SYKIYGGEEEAFDDIGAPDGTTFLVKNLFYNTPARRKFLKSATTEAGY- 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
V++ ++ IAL HP++SFKFI + + T + ++ +G + L + A +
Sbjct: 171 VEQMMVHIALSHPEISFKFI--HNNKNKIYTSGNGKVKDIIYHIYGRDVAGALIPLEAQN 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
++++G+++ PY S + ++ +IN RY+ I+K + +F +
Sbjct: 229 EDVKVTGFVAKPYVSRGNRNYESYFINGRYIKSSIIYKAIEEGYRTFTMKHRY------- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P L+ + L D+ P K + F++ + + A+R+A ++K
Sbjct: 282 ----------PFVCLDFKINQELLDVNVHPTKMEIRFRNGREIYELVVDAVRAALLQK 329
>gi|323343300|ref|ZP_08083527.1| DNA mismatch repair protein MutL [Prevotella oralis ATCC 33269]
gi|323095119|gb|EFZ37693.1| DNA mismatch repair protein MutL [Prevotella oralis ATCC 33269]
Length = 600
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 180/381 (47%), Gaps = 31/381 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ V++ELV N+VDAGA + V V V+V+DDG+G
Sbjct: 5 IQLLPDTVANQIAAGEVIQRPASVIKELVENAVDAGARNIMVLVVDAGKTSVQVIDDGNG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSETDARLSFERHATSKIRKAADL---FALHTMGFRGEALASIAAVAQIELRTRLKGEDI 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G R + GSK ++G + G+ + +LF+N P RRK+++S+ + L+++ R
Sbjct: 122 GTRLSISGSK--FMGQEPCSCPEGSNFIIENLFFNVPARRKFLKSNTTE-LNNIITSFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+P +SF ++S L + +I FG L V + I G
Sbjct: 179 IALVYPDISFV---LKSNGSELFNLKAGGLRQRIIDVFGKRLNQDLLPVEVHTTMCNIQG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + + QY ++N RY+ H N KA G +
Sbjct: 236 FVGKPESARKKEPRQYFFVNGRYMK----HPYFN------------KAVLGAFERLIPVG 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
+ P Y L P D+ P KT + F++ + + + A+R A S D D
Sbjct: 280 EQVP-YFLYFDLPPEDIDVNIHPTKTEIKFENEQAIWQILSAAVREAVGLFNDVPSIDFD 338
Query: 363 MLEDAELPLESSRFQSHQSST 383
M ++P+ F SH ++
Sbjct: 339 MQGSPDIPV----FDSHSNAA 355
>gi|332982486|ref|YP_004463927.1| DNA mismatch repair protein MutL [Mahella australiensis 50-1 BON]
gi|332700164|gb|AEE97105.1| DNA mismatch repair protein MutL [Mahella australiensis 50-1 BON]
Length = 579
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 170/345 (49%), Gaps = 28/345 (8%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSGISR 65
L + R+ + +G V+ VV+ELV NS+DA AT + V + ++V D+G G+ R
Sbjct: 2 LDQDTRSKIAAGEVVERPASVVKELVENSIDAAATAITVEIENGGMTLIRVTDNGEGMER 61
Query: 66 DGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYR 125
+ VL ERHATSK +A DD I T GFRGEALASI+ VS + + T G G
Sbjct: 62 EDAVLAFERHATSK---IARADDLEAIFTLGFRGEALASIAAVSKVRMETVRQGSSEGTF 118
Query: 126 KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIAL 185
++G K + G+ + GT+V DLFYN P R KY++ SPK +K + R L
Sbjct: 119 VEIEGGKLISQGVIG--RPGGTSVTVSDLFYNTPARLKYVK-SPKTEASRIKDIIDRFVL 175
Query: 186 VHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYIS 245
+P +SF+++ + ++L + + + + +G E + V +EI+GYI
Sbjct: 176 GYPHLSFRYLSVGK--QVLYSPGTGHLDEAIAAVYGHETAKKMISVQYEWEGIEINGYIG 233
Query: 246 SPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQAC 305
SP + + +AFQ ++N RY+ + + L ++ + +
Sbjct: 234 SPDTARANRAFQTFFVNGRYIRSPLLSRALEEAFSTLIMVNRF----------------- 276
Query: 306 PAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P ++N+ PH + D+ P KT V F D V A AI+ A
Sbjct: 277 PMCVINITLDPHDV-DVNVHPAKTEVRFTDDRRVAAVFFHAIKRA 320
Score = 40.8 bits (94), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 20/187 (10%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L +IDQHAA ERI L E +L + + YL + L + QLL++ E ++ G
Sbjct: 410 LYIIDQHAAHERI-LYEQYMSMLQKQHLELQYLVSPLVLDITPQERQLLEDNMELLRSMG 468
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1304
+ F+ + +L+ AVP +FG ++ L + + + D S
Sbjct: 469 FEIE-------EFDSDTYVLR---------AVPVLFGRPRAEGLLKDIIDGMRLFDAHSP 512
Query: 1305 TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT--TVPLVNL 1362
V+ ACR A+ D L S+ + E+ ++ C HGRP ++ L
Sbjct: 513 YDYRREEVM-MMACRSAVKAHDHLDQSQIIRLAGEILSGNVPPTCPHGRPIVRSISKYEL 571
Query: 1363 EALHKQI 1369
E + K++
Sbjct: 572 EKMFKRV 578
>gi|423452930|ref|ZP_17429783.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5X1-1]
gi|401139489|gb|EJQ47051.1| DNA mismatch repair protein mutL [Bacillus cereus BAG5X1-1]
Length = 648
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 171/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIRQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE ++ + K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQDTFKK 327
>gi|429761466|ref|ZP_19293891.1| DNA mismatch repair protein [Anaerostipes hadrus DSM 3319]
gi|429183719|gb|EKY24760.1| DNA mismatch repair protein [Anaerostipes hadrus DSM 3319]
Length = 645
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 178/358 (49%), Gaps = 34/358 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I L + + + +G V+ VV+ELV N+VDA A V V + ++V D+
Sbjct: 1 MAKIQLLDQKTIDNIAAGEVIERPASVVKELVENAVDAKANAVTVEIKDGGMTLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI +D + RHATSK+ + D+ + + GFRGEAL+SIS V+ +E++TK
Sbjct: 61 GIGIPKDQVKTAFLRHATSKIRSVEDL---LSVSSLGFRGEALSSISAVAQVELVTKTAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
+G S +Y G ++ D+ GTT + ++LFYN P RRK+++S+ + +
Sbjct: 118 SFSGV------SYKIYGGEEEAFDDIGAPDGTTFLVKNLFYNTPARRKFLKSATTEAGY- 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
V++ ++ IAL HP++SFKFI + + T + ++ +G + L + A +
Sbjct: 171 VEQMMVHIALSHPEISFKFI--HNNKNKIYTSGNGKVKDIIYHIYGRDVAGALIPLEAQN 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
++++G+++ PY S + ++ +IN RY+ I+K + +F +
Sbjct: 229 EDVKVTGFVAKPYVSRGNRNYESYFINGRYIKSSIIYKAIEEGYRTFTMKHRY------- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P L+ + L D+ P K + F++ + + A+R+A ++K
Sbjct: 282 ----------PFVCLDFKIDQELLDVNVHPTKMEIRFRNGREIYELVVDAVRAALLQK 329
>gi|291559007|emb|CBL37807.1| DNA mismatch repair protein MutL [butyrate-producing bacterium
SSC/2]
Length = 645
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 178/358 (49%), Gaps = 34/358 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I L + + + +G V+ VV+ELV N+VDA A V V + ++V D+
Sbjct: 1 MAKIQLLDQKTIDNIAAGEVIERPASVVKELVENAVDAKANAVTVEIKDGGMTLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI +D + RHATSK+ + D+ + + GFRGEAL+SIS V+ +E++TK
Sbjct: 61 GIGIPKDQVKTAFLRHATSKIRSVEDL---LSVSSLGFRGEALSSISAVAQVELVTKTAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
+G S +Y G ++ D+ GTT + ++LFYN P RRK+++S+ + +
Sbjct: 118 SFSGV------SYKIYGGEEEAFDDIGAPDGTTFLVKNLFYNTPARRKFLKSATTEAGY- 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
V++ ++ IAL HP++SFKFI + + T + ++ +G + L + A +
Sbjct: 171 VEQMMVHIALSHPEISFKFI--HNNKNKIYTSGNGKVKDIIYHIYGRDVAGALIPLEAQN 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
++++G+++ PY S + ++ +IN RY+ I+K + +F +
Sbjct: 229 EDVKVTGFVAKPYVSRGNRNYESYFINGRYIKSSIIYKAIEEGYRTFTMKHRY------- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P L+ + L D+ P K + F++ + + A+R+A ++K
Sbjct: 282 ----------PFVCLDFKIDQELLDVNVHPTKMEIRFRNGREIYELVVDAVRAALLQK 329
>gi|291515608|emb|CBK64818.1| DNA mismatch repair protein MutL [Alistipes shahii WAL 8301]
Length = 664
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 175/370 (47%), Gaps = 29/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LPE V N + +G V+ VV+E++ N++DAGAT V V + +++VDDG G
Sbjct: 5 IRLLPEVVANQIAAGEVVNRPASVVKEMMENAIDAGATSVKVNFRDGGKDLIQIVDDGCG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + +RHATSK+G + D+ + TFGFRGEALASI+ VS +E+ T+ G
Sbjct: 65 MSPIDARMAFDRHATSKIGAVEDI---YALHTFGFRGEALASIAAVSQVELRTRQAGDEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + + G + + + VG+ R+LFYN P RR+++ S +K R
Sbjct: 122 GTQTEINGGQ--FAAQNPVMCPVGSQFFVRNLFYNVPARRRFLDKSTTSA-SQIKAEFQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IAL +P+++F ++ + D + T + S ++ G L EV A+ I G
Sbjct: 179 IALCNPQIAF---ELYANDAPVYTLQAGSLAGRIVDVVGRHIKQNLLEVEADTSIACIEG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
YI P + QY+++N R+ +++ S KA +
Sbjct: 236 YIGRPAAAKKRNTEQYLFVNGRF------------FKSTYLTSAILKAYEKLIP------ 277
Query: 303 QAC-PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 361
++C P+Y L L D+ P KT V F D E V + A+R K A D
Sbjct: 278 ESCQPSYFLYLTLDPGRIDVNVHPQKTEVKFADEEAVWQIVNAAVRETLAKTGAVPLMDF 337
Query: 362 DMLEDAELPL 371
D E+P+
Sbjct: 338 DRDSPVEIPV 347
>gi|227357130|ref|ZP_03841499.1| DNA mismatch repair protein [Proteus mirabilis ATCC 29906]
gi|227162662|gb|EEI47629.1| DNA mismatch repair protein [Proteus mirabilis ATCC 29906]
Length = 669
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 179/364 (49%), Gaps = 31/364 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
IN LP + N + +G V+ VV+EL+ NS+DAGAT + + + +++ D+G G
Sbjct: 3 INLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
ISRD L L RHATSK ++ +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISRDDLKLALARHATSK---ISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VG+TV DLFYN P RRK++++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD---EVNANDGALE 239
IAL VS + +S+ I F+D ++ G L
Sbjct: 178 IALSRFDVSINLTHNGKRVRQYRAAKETHQHHRRLSA--ICGNHFVDQAMQLTWEHGDLA 235
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I G++ P + QY Y+N R + +L+NH +A G+L+G++
Sbjct: 236 IKGWVEHPLAPVQSSEIQYCYVNGRMMRD----RLINHAIR--------QAYEGYLQGEQ 283
Query: 300 SKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
P+Y+L L PH + D+ P K V F + V FI +A+ S ++++ D+
Sbjct: 284 Q-----PSYVLYLTVDPHQV-DVNVHPAKHEVRFHESRLVHDFIYQAVLSV-LRQVTEDT 336
Query: 359 FDVD 362
+D
Sbjct: 337 LSLD 340
>gi|87311735|ref|ZP_01093850.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645]
gi|87285519|gb|EAQ77438.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645]
Length = 637
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 26/352 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M TI +LP +V N + +G V+ VV+EL+ NSVDAGAT+V V + V++ D+
Sbjct: 1 MPTIRQLPTSVVNKIAAGEVIERPASVVKELMENSVDAGATRVDVTIEHGGSELVRIADN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D L L HATSK + D DD +GT GFRGEALASI++VS + ++
Sbjct: 61 GCGIAEDQLALSVASHATSK---ILDADDLFHVGTLGFRGEALASIAEVSQFRLRSRIPE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ G + + + VGTT+ R+LF+N PVR+K+++++ + H + +
Sbjct: 118 SDAAAEMYINGGQLVE--VTPCGAAVGTTIEVRNLFFNTPVRKKFLRTTQTEFGH-LSEA 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
RIAL P V F ++ S + L + FG E + L ++ D +
Sbjct: 175 FTRIALAFPHVHFTL--KHGARQIYDLPPSDNWRERLAAFFGDEIATHLIPIDNADDTIR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGY++ P + Q++++N R++ + L+ +A G L R
Sbjct: 233 LSGYVADPKFNRGNNKMQFLFLNGRHIRDRALQHALS------------EAYRGLLLTGR 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
P L L+ P + D+ P K V F+D + + + +R+ ++
Sbjct: 281 -----YPIAFLRLQMPPEMVDVNVHPTKLEVRFQDSGRIYSQLLGTLRTKFL 327
Score = 48.9 bits (115), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 19/188 (10%)
Query: 1171 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1230
Q+ ++++ + VIDQHA ERI EE R K L+G ++ Q L+ PE +
Sbjct: 454 QLHRRYLVTETPEGMVVIDQHALHERILYEEFREKALAGRLET-------QNLLAPETMH 506
Query: 1231 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1290
F+ ++ + + Q SF + I + + P I L
Sbjct: 507 LSPSEFSAVMQAQEPLAQLGFQ-VESFGGD---------TILISSYPAILDRRKPSETLR 556
Query: 1291 EFLQQLADTDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1349
E + L DG +L +L+ +C+ A+ GD L E ++E C
Sbjct: 557 EIIDHLVG-DGKRPDRRDLLDELLHMMSCKAAVKAGDRLSAEEIDALLELRHLCQDAHHC 615
Query: 1350 AHGRPTTV 1357
HGRPT++
Sbjct: 616 PHGRPTSL 623
>gi|425074063|ref|ZP_18477168.1| DNA mismatch repair protein mutL [Proteus mirabilis WGLW4]
gi|404594474|gb|EKA95056.1| DNA mismatch repair protein mutL [Proteus mirabilis WGLW4]
Length = 669
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 179/364 (49%), Gaps = 31/364 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
IN LP + N + +G V+ VV+EL+ NS+DAGAT + + + +++ D+G G
Sbjct: 3 INLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
ISRD L L RHATSK ++ +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISRDDLKLALARHATSK---ISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VG+TV DLFYN P RRK++++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD---EVNANDGALE 239
IAL VS + +S+ I F+D ++ G L
Sbjct: 178 IALSRFDVSINLTHNGKRVRQYRAAKETHQHHRRLSA--ICGNHFVDQAMQLTWEHGDLA 235
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I G++ P + QY Y+N R + +L+NH +A G+L+G++
Sbjct: 236 IKGWVEHPLAPVQSSEIQYCYVNGRMMRD----RLINHAIR--------QAYEGYLQGEQ 283
Query: 300 SKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
P+Y+L L PH + D+ P K V F + V FI +A+ S ++++ D+
Sbjct: 284 Q-----PSYVLYLTVDPHQV-DVNVHPAKHEVRFHESRLVHDFIYQAVLSV-LRQVTEDT 336
Query: 359 FDVD 362
+D
Sbjct: 337 LSLD 340
>gi|408370454|ref|ZP_11168231.1| DNA mismatch repair protein MutL [Galbibacter sp. ck-I2-15]
gi|407744212|gb|EKF55782.1| DNA mismatch repair protein MutL [Galbibacter sp. ck-I2-15]
Length = 614
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 175/348 (50%), Gaps = 33/348 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+ELV N+VDAG+T + + G ++VVD+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELVENAVDAGSTVIQLIIKGAGKTLIQVVDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S ++L +RHATSK+ +D + T GFRGEALASI+ ++ LEI T+
Sbjct: 65 MSERDMLLSVQRHATSKI---RTAEDLFQLHTKGFRGEALASIAAIAHLEISTREEDNEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERK---DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + ++GS I+D + + GT++ ++LF+N P RR +++S ++ H + +
Sbjct: 122 GIQLKIEGST-----INDPKPIACEKGTSIAVKNLFFNIPARRNFLKSDTVELRHIIDEF 176
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
RIAL HP + F F SE L S+ +++ FG + L + + ++
Sbjct: 177 -HRIALAHPDIHFDFFHNNSE---LFKLPPSNLRQRIVNVFGGKTNEKLVPIKEDTDVVK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G+IS P + + Q+ ++N+R+V +H H +S A G LK
Sbjct: 233 INGFISKPAFTKKTRGQQFFFVNNRFVKNSYLH----HAVSS--------AFEGLLKPGH 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P Y + L S D+ P KT V F + + + A + ++
Sbjct: 281 H-----PGYFIFLEVDPSSIDINIHPTKTEVKFDEDQAMYAILRSTVK 323
>gi|383814808|ref|ZP_09970226.1| DNA mismatch repair protein [Serratia sp. M24T3]
gi|383296300|gb|EIC84616.1| DNA mismatch repair protein [Serratia sp. M24T3]
Length = 660
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 183/380 (48%), Gaps = 38/380 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IRVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
IS+D L L RHATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISKDELALALARHATSKISSL---DDLEAILSLGFRGEALASISSVSRLMLTSRTATQDE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + G+TV DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTVKPAAHPQGSTVEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFID----MESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
IAL VSF M + +S LA + S+ +E EV + G L
Sbjct: 178 IALARFDVSFNLSHNGKLMRQYRAVKDPAQTSRRLASICSTTFVEHAL---EVEWSHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S ++ QY Y+N+R + +L+NH A D K +
Sbjct: 235 AIHGWVADPAGSRNLTDMQYCYVNNRMMKD----RLINH-AIRQAYQDQLKDDQQ----- 284
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
PAY+L L PH + D+ P K V F V FI +A+ S + +
Sbjct: 285 -------PAYVLYLDVDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQAVVSVLQQAGS-- 334
Query: 358 SFDVDMLEDAELPLESSRFQ 377
ML+ E E+ R+Q
Sbjct: 335 ----PMLDTTEPQEETPRWQ 350
>gi|332654853|ref|ZP_08420595.1| DNA mismatch repair protein HexB [Ruminococcaceae bacterium D16]
gi|332516196|gb|EGJ45804.1| DNA mismatch repair protein HexB [Ruminococcaceae bacterium D16]
Length = 678
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 176/353 (49%), Gaps = 34/353 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M TI L V + + +G V+ V +EL+ N++DAGA+KV V + +++V DD
Sbjct: 5 MPTIQVLDSHVADLIAAGEVVERPASVAKELMENAIDAGASKVTVEISHGGLTFLRVTDD 64
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI L RHATSKL D++ IGT GFRGEALA+IS VS +E++T+
Sbjct: 65 GKGIPAGELKTAFLRHATSKLRTAYDLE---AIGTLGFRGEALAAISAVSRVEVMTRTAD 121
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
P G ++G G+ E ++ +GTT+V RDLFYN P R K+M+ + +
Sbjct: 122 APLGASLSLEG------GVPGEIEEAGCPLGTTMVVRDLFYNTPARLKFMKKDSAEG-AA 174
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
V V R+AL HP+VS KFI + + ELL T + + + + G E EV +
Sbjct: 175 VFAVVQRVALSHPEVSVKFI-RDGKQELL-TPGDGALQSAVYAVLGRELALGFREVKSGG 232
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
++++G++S P + + +Q+ ++N R V +LL +AA + K F
Sbjct: 233 DGIKVTGFVSQPACCRASRNWQFFFVNGRQVKS----RLL--MAALEQAYQNQKMVGKF- 285
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
PA +L++ S D+ P KT V F V + A+ S
Sbjct: 286 ----------PACVLHVEVKLSQVDVNVHPAKTEVKFGSEREVFNAVYHAVLS 328
>gi|425070242|ref|ZP_18473356.1| DNA mismatch repair protein mutL [Proteus mirabilis WGLW6]
gi|404595508|gb|EKA96048.1| DNA mismatch repair protein mutL [Proteus mirabilis WGLW6]
Length = 669
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 179/364 (49%), Gaps = 31/364 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
IN LP + N + +G V+ VV+EL+ NS+DAGAT + + + +++ D+G G
Sbjct: 3 INLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
ISRD L L RHATSK ++ +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISRDDLKLALARHATSK---ISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VG+TV DLFYN P RRK++++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD---EVNANDGALE 239
IAL VS + +S+ I F+D ++ G L
Sbjct: 178 IALSRFDVSINLTHNGKRVRQYRAAKETHQHHRRLSA--ICGNHFVDQAMQLTWEHGDLA 235
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I G++ P + QY Y+N R + +L+NH +A G+L+G++
Sbjct: 236 IKGWVEHPLAPVQSSEVQYCYVNGRMMRD----RLINHAIR--------QAYEGYLQGEQ 283
Query: 300 SKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
P+Y+L L PH + D+ P K V F + V FI +A+ S ++++ D+
Sbjct: 284 Q-----PSYVLYLTVDPHQV-DVNVHPAKHEVRFHESRLVHDFIYQAVLSV-LRQVTEDT 336
Query: 359 FDVD 362
+D
Sbjct: 337 LSLD 340
>gi|118581367|ref|YP_902617.1| DNA mismatch repair protein [Pelobacter propionicus DSM 2379]
gi|166232100|sp|A1AT89.1|MUTL_PELPD RecName: Full=DNA mismatch repair protein MutL
gi|118504077|gb|ABL00560.1| DNA mismatch repair protein MutL [Pelobacter propionicus DSM 2379]
Length = 608
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 173/359 (48%), Gaps = 38/359 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LPE + N + +G V+ V++EL+ NS+DAGAT + V + +++ D+G G
Sbjct: 5 IAILPEIITNKIAAGEVVERPASVIKELIENSLDAGATDISVEIAAGGRRLIRITDNGHG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+SR+ +L ERHATSK+ D+D GI T GFRGEAL S++ VS L + ++ P
Sbjct: 65 MSREDALLSLERHATSKIRSDNDLD---GIHTLGFRGEALPSVASVSRLRLSSRETDSPE 121
Query: 123 GYRKVMKGSKCLYLGIDDERK---DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G +++G K + D R GT + +F+N P R K+++S+ + H V C
Sbjct: 122 GTEIIVEGGK-----VRDVRACGMAPGTVISVEQIFFNTPARLKFLRSAETEAGH-VGDC 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+A+ P V+F S+ L L L + G + L E++ + ++
Sbjct: 176 LTRMAISRPDVAFS---CSSDGRDLLRVQRGDLLRRLSQALGKGTAASLHELHLSRDGID 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISGYISSP S + + YIN R++ K++ H +A G + R
Sbjct: 233 ISGYISSPAACRSTTSAMFTYINGRFIRD----KVIQHAI--------MQAYRGVMDRGR 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-----RSAWMKK 353
P L ++ P + D+ P K V F+ V ++ A+ RS W+ +
Sbjct: 281 -----YPVVALFIQLPPAEVDVNVHPTKHEVRFRRQSLVHDTLQSALEELLKRSPWLPR 334
Score = 42.0 bits (97), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 29/209 (13%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
+++ Q ++I +G L +IDQHAA ER+ ++LRH+ + +S Q L+ P
Sbjct: 421 RIIGQFHDEYILCQSGDQLVIIDQHAASERVAFQKLRHQFDTDGVES-------QRLLFP 473
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI-----TVITLLAVPCIFG 1281
E L +F+E +R F L + ++ + + A+P +
Sbjct: 474 E---TLELSFSE------------ADTARRFGNELARIGFELEPFGGNTVIVSAIPRLAI 518
Query: 1282 VNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELK 1341
+ + + L +L SS S +L+ AC + L + ++ +
Sbjct: 519 ARDASGLIRDLLAELTQLGASSAFLDSRDALLSRIACHSVVRGVHRLEERQIRELLHGMD 578
Query: 1342 QTSLCFQCAHGRPTT--VPLVNLEALHKQ 1368
T C HGRP + + L LE + K+
Sbjct: 579 GTDFAASCPHGRPVSHVITLGELERIFKR 607
>gi|336434948|ref|ZP_08614667.1| hypothetical protein HMPREF0988_00252 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336002356|gb|EGN32467.1| hypothetical protein HMPREF0988_00252 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 706
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 182/373 (48%), Gaps = 38/373 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ +V+EL N++DAGA V V + G+ +++
Sbjct: 1 MAHIKVLDQITIDKIAAGEVIERPASIVKELTENAIDAGADSVTVEIEDGGIT--LIRIS 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+GSGI R+ + RH+TSK+ +DD I + GFRGEAL+SI+ V+ +E+ITK
Sbjct: 59 DNGSGIEREDIHNAFLRHSTSKI---ESVDDLMHISSLGFRGEALSSIAAVTKVELITKP 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G R V++G K + ++D GTT + R LFYN P RRK++++ + H V+
Sbjct: 116 KEDTFGTRYVIEGGK--EISMEDTGASDGTTFLVRQLFYNVPARRKFLKTPMTEAGH-VQ 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R+AL HP+V+ +F++ + E L T S ++ S +G E + + E++
Sbjct: 173 DLLTRLALSHPEVAIRFVN--NGQEKLRTSGSGKLKEVIYSIYGRETAANILELDYEKNG 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ I G+I P + + F+ +++N RYV I K A+ D + + F
Sbjct: 231 IGIRGFIGKPIITRGNRNFENIFVNGRYVKSAVISK------AAEDAYKDFMMQHKF--- 281
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
P ++L+ D+ P K + F+ ++A+ A + I
Sbjct: 282 --------PFFVLHFLVDGETVDVNVHPTKMELRFQK--------QQAVYDAVFEAIHRR 325
Query: 358 SFDVDMLEDAELP 370
D +++ LP
Sbjct: 326 LLDQELIPQVTLP 338
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 19/176 (10%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L +IDQHAA ER+ E ++ + E S YL L L ++L ++ G
Sbjct: 536 LYIIDQHAAHERVLYERTLKEMKTREFTS-QYLSPPIILNLSMQEAEVLNTHKDRFAQLG 594
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLSDVDLLEFLQQLADTDGSS 1303
+ I G ++ + AVP +FG+ ++ LLE L L+D +S
Sbjct: 595 F--EIEEFGGEAY--------------AVRAVPANLFGIAKKEL-LLEMLDALSDGLNTS 637
Query: 1304 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1359
TP + + S +C+ A+ + L E ++ EL + C HGRPT + +
Sbjct: 638 MTPDLIDEKVASMSCKAAVKGNNRLSAREVDTLIGELLLLDNPYHCPHGRPTIIAM 693
>gi|160880512|ref|YP_001559480.1| DNA mismatch repair protein MutL [Clostridium phytofermentans ISDg]
gi|160429178|gb|ABX42741.1| DNA mismatch repair protein MutL [Clostridium phytofermentans ISDg]
Length = 695
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 173/356 (48%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L ++ N + +G V+ VV+EL+ N++DAGAT V + G+ ++++
Sbjct: 1 MAKIALLDQSTINQIAAGEVVERPASVVKELIENAIDAGATAVTAEIKDGGIS--FIRIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI +D + RH+TSK+ ++D IG+ GFRGEAL+SI+ V+ +E++TK
Sbjct: 59 DNGAGIEKDDIPTAFLRHSTSKI---QSIEDLLTIGSLGFRGEALSSIASVAQVELVTKT 115
Query: 118 HGRPNGYRKVMKGSK---CLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G R +++G + +G D GTT + R+LF+N P RRK+++S+ + +
Sbjct: 116 RTAFTGIRYLIEGGEEQSMTEIGCPD-----GTTFIVRNLFFNTPARRKFLKSAMTEASY 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ + R+A+ HP +SFKFI+ + +L T +S ++ +G + + V
Sbjct: 171 -ISDLMERLAVSHPDISFKFIN--NNKTVLHTFGNSQLKDIIYHVYGRTIAAEVVTVENG 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
+ + ISGYI P S + ++ +IN RY+ I+K + + +
Sbjct: 228 NEHISISGYIGKPIISRGNRNYENYFINGRYIKSNIINKAIEEAYRPYSMQHKY------ 281
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
P ++ D+ P K V F ++E + IR A
Sbjct: 282 -----------PFTAIHFSINPEFIDVNVHPTKMEVRFHNFEELYQLTLNTIRDAL 326
Score = 45.1 bits (105), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 30/212 (14%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1217
+++ + A+++ Q K + + L +IDQHAA E++ E ++ E S
Sbjct: 499 LSEEGIRQARIIGQAFKTYWFIELENQLYIIDQHAAHEKVLYESTMKRLKEKETMS---- 554
Query: 1218 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVI-----T 1272
Q+L P I L N E+ + ++ + L++L +I
Sbjct: 555 ---QQLCPPVI---LTLNLREE------------EAIKTHREFLSMLGFEIEPFGGKEYA 596
Query: 1273 LLAVPC-IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPS 1331
+ AVP +FG+ + L+EF+ L + + S TP +L + S +C+ A+ +L
Sbjct: 597 VSAVPADMFGL-AGERLLIEFIDDLVE-EISRGTPDVILEKIASLSCKAAVKGNYNLSVE 654
Query: 1332 ECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
E ++++L F C HGRP + + E
Sbjct: 655 EANELLKQLLTLENPFHCPHGRPIIISMTKYE 686
>gi|257870588|ref|ZP_05650241.1| DNA mismatch repair protein [Enterococcus gallinarum EG2]
gi|257804752|gb|EEV33574.1| DNA mismatch repair protein [Enterococcus gallinarum EG2]
Length = 710
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 165/331 (49%), Gaps = 35/331 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I L E + N + +G V+ VV+ELV N+VDAG+T++ +++ ++V+D+
Sbjct: 1 MGKIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + +V +RHATSK + + DD I T GFRGEAL SI+ VS+L I T
Sbjct: 61 GEGIAEEDVVTAFKRHATSK---IHNRDDLFRIRTLGFRGEALPSIASVSILTIETAVKD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G +KG + R+ GT + +LFYN P R KY+++ + L ++
Sbjct: 118 ASQGSFLRLKGGTVEEHIPANLRQ--GTKITVENLFYNTPARLKYVKTLQTE-LANIGDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIAL HP+V+F+ + +++L T S + +G+E + +N+ D +
Sbjct: 175 VNRIALSHPEVAFRLV--HEGNKMLTTTGSGDLKQTIAGIYGVETAKKMLAINSEDLDFK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++GY+S P + + + + IN RY+ ++ N + G
Sbjct: 233 LTGYVSLPEVTRASRNYLSTIINGRYI-------------------RNFALNKAIVAGYG 273
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHV 330
SK L+ R P ++ ++T DPL V
Sbjct: 274 SK-------LMVGRFPIAVLEITMDPLLVDV 297
>gi|197287175|ref|YP_002153047.1| DNA mismatch repair protein [Proteus mirabilis HI4320]
gi|238690089|sp|B4F203.1|MUTL_PROMH RecName: Full=DNA mismatch repair protein MutL
gi|194684662|emb|CAR46598.1| DNA mismatch repair protein [Proteus mirabilis HI4320]
Length = 669
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 179/364 (49%), Gaps = 31/364 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
IN LP + N + +G V+ VV+EL+ NS+DAGAT + + + +++ D+G G
Sbjct: 3 INLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
ISRD L L RHATSK ++ +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISRDDLKLALARHATSK---ISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VG+TV DLFYN P RRK++++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD---EVNANDGALE 239
IAL VS + +S+ I F+D ++ G L
Sbjct: 178 IALSRFDVSINLTHNGKRVRQYRAAKETHQHHRRLSA--ICGNHFVDQAMQLTWEHGDLA 235
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I G++ P + QY Y+N R + +L+NH +A G+L+G++
Sbjct: 236 IKGWVEHPLAPVQGSEIQYCYVNGRMMRD----RLINHAIR--------QAYEGYLQGEQ 283
Query: 300 SKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
P+Y+L L PH + D+ P K V F + V FI +A+ S ++++ D+
Sbjct: 284 Q-----PSYVLYLTVDPHQV-DVNVHPAKHEVRFHESRLVHDFIYQAVLSV-LRQVTEDT 336
Query: 359 FDVD 362
+D
Sbjct: 337 LSLD 340
>gi|336065175|ref|YP_004560034.1| DNA mismatch repair protein [Streptococcus pasteurianus ATCC 43144]
gi|334283375|dbj|BAK30948.1| DNA mismatch repair protein [Streptococcus pasteurianus ATCC 43144]
Length = 640
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 173/355 (48%), Gaps = 42/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI++D + L RHATSK+ + AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 61 GEGIAQDDVALSLHRHATSKIKNQADL---FRIRTLGFRGEAIPSIASISHFTVKTATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
+G V KG + E+++ VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 ENHGTLLVAKGGEI-------EKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F I+ + + T S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFSLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
D E+SGYIS P + + + + + IN RY+ ++ N
Sbjct: 227 ADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRA 267
Query: 294 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V + +++ I AI
Sbjct: 268 ILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMSLISSAI 322
>gi|291522252|emb|CBK80545.1| DNA mismatch repair protein MutL [Coprococcus catus GD/7]
Length = 698
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 172/354 (48%), Gaps = 36/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M +I+ L N + +G V+ + V++ELV N++DA A+ + + + G+ ++V
Sbjct: 1 MKSIHLLDSDTINKIAAGEVVERPSSVIKELVENAIDAKASAITIEIKEGGIA--MMRVT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI RD + RHATSK+ D+ +G+ GFRGEAL+SI+ VS +E+ITK
Sbjct: 59 DNGGGIDRDDIKTAFVRHATSKIETAMDL---MTVGSLGFRGEALSSIASVSQIELITKV 115
Query: 118 HGRPNGYRKVMKGSK---CLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
H G R + G + C +G D GTT++ R+LFYN P RRK+++++ + +
Sbjct: 116 HRELLGVRYCIDGGEEKSCDDIGCPD-----GTTIIVRNLFYNTPARRKFLKTAATEAAY 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ R+AL HP VSFKFI+ + L T + + ++ +G + L EV+
Sbjct: 171 -INDLAGRLALSHPDVSFKFIN--NNQNRLHTSGNGNLRDIIYQIYGRDVTGQLLEVDVQ 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
++G+I P S ++++ +IN RY+ I K + +F +
Sbjct: 228 GKLCHVTGFIGKPILSRGNRSWENYFINGRYIKSNIITKAIEDAYKTFVMIHKY------ 281
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
P ++ +L D+ P K + F E V I IR+
Sbjct: 282 -----------PFTAFHIEVDPALIDVNVHPRKMELRFNQNEAVYQEIYDIIRA 324
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 28/202 (13%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
+++ QV + V G L +IDQHAA E++ E+L K S + L L L
Sbjct: 510 RLIGQVFDTYWMVEYDGKLFIIDQHAAHEKVLYEKLM-KAFSQKALQKQMLSPPVILTLS 568
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLS 1285
+ + +A+ + G+ I G R + + VP +FG+N
Sbjct: 569 MQEENIYKQYADYFAELGF--EIELFGGREY--------------AVRGVPLQLFGMNAR 612
Query: 1286 DVDLLEFLQQLAD----TDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELK 1341
D+ +E L + + DGS+ T + + AC+ A+ + L E ++E+L
Sbjct: 613 DI-FIEVLDSVTEESRRLDGSAITDH-----IATMACKAAVKGNNKLSFKEADTLIEQLL 666
Query: 1342 QTSLCFQCAHGRPTTVPLVNLE 1363
Q + C HGRPT + L E
Sbjct: 667 QAKNPYTCPHGRPTIISLSKYE 688
>gi|320105858|ref|YP_004181448.1| DNA mismatch repair protein MutL [Terriglobus saanensis SP1PR4]
gi|319924379|gb|ADV81454.1| DNA mismatch repair protein MutL [Terriglobus saanensis SP1PR4]
Length = 655
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 176/388 (45%), Gaps = 50/388 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I L + V N + +G V+ VV+EL+ N+VDAGAT++ V V +++ D+
Sbjct: 1 MGRIRVLSDQVANQIAAGEVVERPASVVKELLENAVDAGATRIRVDVEAGGRKLIRIEDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSG+ RD +L ERHATSK L + +D I T GFRGEAL SI+ V+ +E+ T+A
Sbjct: 61 GSGMVRDDAMLAFERHATSK---LRNSEDLLSISTLGFRGEALPSIASVARVEMETRAAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G L ++D + VGTT+ RDLF+N P R+K+M+S ++ H V
Sbjct: 118 DEVGTRIEISGGNMLR--VEDIGRPVGTTLAIRDLFFNTPARKKFMKSESTELSH-VAAL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIE------------DFSF 227
V AL HP+ F+ + LL + L FG E DFS
Sbjct: 175 VTHYALAHPEKHFEL--HTTTHALLVAPAVRDAGERLFQIFGAETHKAMIPAVAEVDFSR 232
Query: 228 L------------DEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLL 275
+ D G L + G++S P + Y ++N R V KL+
Sbjct: 233 VGVPEPPPWKRGEDYEAPAPGFLRVHGFVSKPELQKLNRNSMYFFVNGRQVRD----KLI 288
Query: 276 NHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDW 335
H A + + F P LL L P D+ P KT V F+
Sbjct: 289 LH--AMGEAYRNVIPPTSF-----------PVVLLFLEMPPQEVDVNVHPAKTEVRFRQS 335
Query: 336 EPVLAFIERAIRSAWMKKIAHDSFDVDM 363
V F+ +R+A MK SF + +
Sbjct: 336 AFVHDFVRDTVRNAVMKARPVASFAMAL 363
>gi|312143590|ref|YP_003995036.1| DNA mismatch repair protein MutL [Halanaerobium hydrogeniformans]
gi|311904241|gb|ADQ14682.1| DNA mismatch repair protein MutL [Halanaerobium hydrogeniformans]
Length = 612
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 204/425 (48%), Gaps = 43/425 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
MG I +LP+ V N + +G V+ +V+EL+ NS+DAGA + V V ++KV DD
Sbjct: 1 MGEIKQLPQNVANQISAGEVVERPASIVKELIENSIDAGAKNIEVRVKEGGKKFIKVKDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + R+ATSK+ D+DD + + GFRGEALASI+ V+ +E++++
Sbjct: 61 GHGILPEDIKAAFNRYATSKI---KDIDDLYSLYSLGFRGEALASIASVAEVEMLSRHKS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERK----DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
+ NG + +KG + + E K +GT V RDLFYN P R KY++++ + H
Sbjct: 118 KENGVKIRLKGGEVI------ENKPAASTIGTEVKVRDLFYNTPARYKYLKTTSTEFSHI 171
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
+ + V A+ + ++SFK + +LL T + + + +G E L ++ D
Sbjct: 172 I-RIVNAEAVANNEISFKL--YHNNKQLLSTPGNGKLKDCIYALYGEEIADNLLAIDIED 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
+++SGYI+ P + + ++ + + N R PIH N+LAA N +
Sbjct: 229 RYIKLSGYIARPEKTRAGRSHELFFANGR-----PIH---NNLAAK-------AVENAYS 273
Query: 296 K----GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
K G++ P L ++ L D+ P K V F + + I + +R
Sbjct: 274 KLIDPGRK------PIVFLFIKINPILVDVNVHPTKKEVKFSRSQIIYDVISKGVRKTLK 327
Query: 352 KKIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQ 411
++ D++ E + ++ LKN++ Q+ +M + + + +
Sbjct: 328 AADPTTRIKLNSSNDSK-DNEVNTAPVYEKQVFKEQGRLKNISDQKKNMPFNKSRKHSAE 386
Query: 412 EFQKD 416
E QK+
Sbjct: 387 ELQKN 391
Score = 45.4 bits (106), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 1159 NKSCLEDA-KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1217
NKS ED K L Q+ ++ + L +IDQH A ERI E+L +K + + L
Sbjct: 417 NKSAKEDKFKFLAQIFNSYLLIETPEGLKIIDQHNAHERILYEKL-YKEYDEKNTATQSL 475
Query: 1218 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1277
++ L QL+ + + ++ G + F KN L+Q VP
Sbjct: 476 LIPVKIELTAEEKQLVDEYKQSFQELGIDFS-------EFGKNTILIQE---------VP 519
Query: 1278 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR-VLNSKACRGAIMFGDSLLPSECALI 1336
+ N S +++E L +G + + + + ++ ACR A+ G L E I
Sbjct: 520 VLLK-NKSTRNIIEELIAELAEEGKTKSAAEMQKTMIEYLACRTAVKAGQPLNNQESLRI 578
Query: 1337 VEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQ 1371
++EL ++ ++C H RP + ++ E + K I +
Sbjct: 579 IKELFESENPYRCPHSRPVMIN-ISREEIEKGIGR 612
>gi|401683694|ref|ZP_10815579.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. BS35b]
gi|400186734|gb|EJO20939.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus sp. BS35b]
Length = 649
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 204/437 (46%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVSRGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + + +D +
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIAIENSDLDFK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKERELMVLLSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 ALIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYEKTELSRPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL EE ++ F++
Sbjct: 380 HQVELTEEGRDLTLFAK 396
>gi|153657|gb|AAA88600.1| mismatch repair protein [Streptococcus pneumoniae]
Length = 649
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 205/437 (46%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ V +ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVCKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|377576924|ref|ZP_09805907.1| DNA mismatch repair protein MutL [Escherichia hermannii NBRC
105704]
gi|377541452|dbj|GAB51072.1| DNA mismatch repair protein MutL [Escherichia hermannii NBRC
105704]
Length = 622
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 184/380 (48%), Gaps = 37/380 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I++D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 INKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + + R
Sbjct: 120 AWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEIIRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGAL 238
IAL V+ I++ +L+ P A G I +FL++ + G L
Sbjct: 178 IALARFDVT---INLSHNGKLIRQYRGVQPNAPKERRLGAICGTAFLEQALTIEWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G+++ P S + QY Y+N R + +L+NH A C D +
Sbjct: 235 ALHGWVAEPKASAGLSEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGVDQQ----- 284
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
PAY+L L PH + D+ P K V F V FI + + S ++ A
Sbjct: 285 -------PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQQAEP 336
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+ + E+ E+ R+Q
Sbjct: 337 TLPLGKAEE-----EAVRWQ 351
>gi|374309991|ref|YP_005056421.1| DNA mismatch repair protein MutL [Granulicella mallensis MP5ACTX8]
gi|358752001|gb|AEU35391.1| DNA mismatch repair protein MutL [Granulicella mallensis MP5ACTX8]
Length = 654
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 172/386 (44%), Gaps = 54/386 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I L + V N + +G V+ VV+EL+ NS+DAGAT++ + + +++VD+
Sbjct: 1 MGKIRVLSDQVANQIAAGEVVERPASVVKELLENSLDAGATRIRLEIEAGGRKLIRIVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ RD +L ERHATSK L DD I T GFRGEAL SI+ V+ + + T+A
Sbjct: 61 GHGMGRDDALLAFERHATSK---LRSSDDLLSIATLGFRGEALPSIASVARVSLETRAVE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + G L ++D GTT+ RDLF+N P RRK+++S ++ H V
Sbjct: 118 DEVGTMLEIAGGNLLR--VEDAGLPAGTTIAVRDLFFNTPARRKFLRSEQTELGH-VAAL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA------ 233
V AL HP F+ S LL + ++ L FG E F L V A
Sbjct: 175 VTHYALAHPDKHFEL--HSSTQSLLVAPAVANAGERLYQIFGRETFESLIPVAAELDFSR 232
Query: 234 ------------------NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLL 275
G + ++G++S P + YV++N R + +L+
Sbjct: 233 AGLPEPPPWKRGEDYEAPEPGFIRLTGFVSKPELQKLNRNSIYVFVNGRLIRD----RLI 288
Query: 276 NHLAASFDCSDSWKANNGFLKGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFK 333
H F + R+ + P LL L P D+ P KT V F+
Sbjct: 289 LH---------------AFTEAYRNIIPPTSYPVVLLFLEMPPQEVDVNVHPAKTEVRFR 333
Query: 334 DWEPVLAFIERAIRSAWMKKIAHDSF 359
V F+ A+R+A M SF
Sbjct: 334 QGSFVHDFVRDAVRTAQMNARPAASF 359
>gi|14577936|gb|AAK68861.1| HexB [Lactococcus lactis]
Length = 323
Score = 140 bits (354), Expect = 4e-30, Method: Composition-based stats.
Identities = 103/349 (29%), Positives = 173/349 (49%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPATVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ ++ + L RHATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRHATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSTAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 118 EESGTKLVAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D E
Sbjct: 175 INRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
++GY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 233 LTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGYG 273
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
R P +L+++ +L D+ P K V ++A I +AI
Sbjct: 274 NRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAI 322
>gi|389855776|ref|YP_006358019.1| DNA mismatch repair protein MutL [Streptococcus suis ST1]
gi|353739494|gb|AER20501.1| DNA mismatch repair protein MutL [Streptococcus suis ST1]
Length = 645
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 169/356 (47%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRHATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H V
Sbjct: 118 SAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R++L HP+++F ++ EL+ T + + +GI + E+ A
Sbjct: 173 -DVVNRLSLAHPEIAFALVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEAL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ISGY+S P + + + + ++IN RY+ ++ N L+
Sbjct: 230 DFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAILE 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 271 GYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|340397921|ref|YP_004726946.1| DNA mismatch repair protein mutL [Streptococcus salivarius CCHSS3]
gi|338741914|emb|CCB92419.1| DNA mismatch repair protein mutL [Streptococcus salivarius CCHSS3]
Length = 645
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 177/353 (50%), Gaps = 38/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L E + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MPKIIELSEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A G
Sbjct: 61 GEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAADG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + V KG + E +D VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 EAYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD G
Sbjct: 227 SDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD---------G 271
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
+ G + P +++++ L D+ P K V + ++A I AI
Sbjct: 272 Y--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|255280935|ref|ZP_05345490.1| DNA mismatch repair protein MutL [Bryantella formatexigens DSM
14469]
gi|255268383|gb|EET61588.1| DNA mismatch repair domain protein [Marvinbryantia formatexigens
DSM 14469]
Length = 743
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 174/355 (49%), Gaps = 36/355 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L E + + +G V+ +V+ELV N++DAGA V V + G+ +++
Sbjct: 1 MREIAVLDEQTIDKIAAGEVIERPASIVKELVENAIDAGANAVTVEIKDGGIS--LIRIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+GSGI + + RHATSK+ D+ D T + GFRGEAL+SI+ V +E+ITK
Sbjct: 59 DNGSGIEAKQVPVAFWRHATSKIRKADDLLDVT---SLGFRGEALSSIAAVCQVELITKT 115
Query: 118 HGRPNGYRKVMKGSKCLYL---GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G R +++G K L G D GTT + R++FYN P R+K+++++ + +
Sbjct: 116 ADSLTGVRYLIEGGKEKSLEEIGAPD-----GTTFLVRNIFYNTPARKKFLKTAQTEAGY 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ V RIAL HP+VSFKFI + L T + ++ +G + + L E++A
Sbjct: 171 -ISDMVERIALSHPEVSFKFI--ANNQTKLHTSGNHQLKDIIYHIYGRDIAANLIEISAG 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
++ I+G+I P S + ++ ++N RY+ I K + +F +
Sbjct: 228 TDSVRINGFIGKPVISRGNRNYENYFVNGRYIRSNIIAKAIEDAYHTFMMKHKY------ 281
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P +LN L D+ P K + F + E + + A+R+A
Sbjct: 282 -----------PFTVLNFTIDGKLLDVNVHPAKLELRFAENEEMYRIVYEAVRNA 325
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 30/283 (10%)
Query: 1093 LSLCPHAHL-GAQAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGE 1151
L+L P A + G + SG + P T N + + N + +TGE
Sbjct: 478 LNLQPEAGMSGNPMQAEEAASGNSAQPEAP-ATGNPVQAEKSASGNSAQPEAPAAGVTGE 536
Query: 1152 ---FFIPDSI-NKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVL 1207
F D + +K +++ +++ QV + V L +IDQHAA E++ E ++ +
Sbjct: 537 QMSLFEDDKLLSKEHVKEHRIIGQVFDTYWIVQFKDKLFLIDQHAAHEKVLYERMKKSME 596
Query: 1208 SGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQ 1267
E S L+ L L +LL+ + E+ ++ G+ I G R +
Sbjct: 597 KREFTS-QLLNPPVILTLSMAEEELLKKYQERFREIGF--EIEEFGGREY---------- 643
Query: 1268 ITVITLLAVP-CIFGVNLSDVDL-LEFLQQL-ADTDGSSTTPPSVLRVLNSKACRGAIMF 1324
L AVP +FG L+D DL LE L L A TD S ++ + + +C+ A+
Sbjct: 644 ----ALRAVPDNLFG--LADKDLFLEMLDGLSAQTDALSIE--TIDDKIATMSCKAAVKG 695
Query: 1325 GDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHK 1367
L +E +++EL + C HGRPT + + E K
Sbjct: 696 NSRLSTAEIHALIDELLTLENPYNCPHGRPTIISMSKYEIERK 738
>gi|427385462|ref|ZP_18881769.1| DNA mismatch repair protein mutL [Bacteroides oleiciplenus YIT
12058]
gi|425727106|gb|EKU89967.1| DNA mismatch repair protein mutL [Bacteroides oleiciplenus YIT
12058]
Length = 642
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 186/377 (49%), Gaps = 45/377 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DAGA ++ V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGAQEIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLAFERHATSKIKEAADL---FALRTMGFRGEALASIAAVAEVELKTRMDDEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRIVIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILT 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F + S D L +++ FG + L V+ + +
Sbjct: 175 EFERIALVHPEVAFY---LYSNDTELFNLPVMPLRQRILAVFGKKLNQHLLSVDVDTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SG+++ P + A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGFVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 ----QLIPAGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELP 370
A S D DM ++P
Sbjct: 330 NAVPSIDFDMEGMPDIP 346
>gi|402302066|ref|ZP_10821186.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC9]
gi|400381053|gb|EJP33857.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC9]
Length = 621
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 173/356 (48%), Gaps = 32/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+ELV N++DAGAT + + + G +++V D+
Sbjct: 1 MTRIHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGATAIEIEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R RHATSK+ +AD+ +GT GFRGEAL +I+ VS +IT+
Sbjct: 61 GRGMERPDAETAILRHATSKISTVADLQT---VGTLGFRGEALPTIASVSRFSLITRTAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G K I+D DVGTTV DLF+N P R+K+++ + +
Sbjct: 118 ADLGTRVEILGGKTTE--IEDAGCDVGTTVRVEDLFFNTPARKKFLKMD-RTEAGKISDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND--GA 237
V+ +AL P ++F+F++ + L T S + S +G + L ++ D G
Sbjct: 175 VIMLALSRPDIAFRFVN--NNRLTLMTAGDDSLRRAIESIYGGDAAGALIPLDFTDETGD 232
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ I+GYIS P S +A+Q +N R + I K ++++ + GF
Sbjct: 233 IRITGYISKPSMIRSSRAWQTYIVNGRTIQNRAIAKAIDNV------YRALVPKMGF--- 283
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA 349
P +L + P D+ P KT + F+D ++ V +E A+R A
Sbjct: 284 --------PLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKTVEGAVRGA 331
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 50/204 (24%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1215
+ QVD +I + L +IDQHAA ERI + L H +LS + +
Sbjct: 435 IGQVDLTYIVAQSTRALYIIDQHAAHERILFDRFCALAEGIPSQQMLVHAILSFDARETQ 494
Query: 1216 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
Y++ EL +G+++ G R++ L
Sbjct: 495 YIEENAEL-FSRLGFRM-----------------EPAGDRAYR--------------LTE 522
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV--LNSKACRGAIMFGDSLLPSEC 1333
P + ++ + E L L + ++ P+ LR L + ACR AI G+ L +
Sbjct: 523 SPADVPTDEAEDVIREILVSLGELHAAT---PAQLRQAGLATMACRAAIKAGEELSFRQM 579
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTV 1357
+++EEL+ T F C HGRPT +
Sbjct: 580 EILLEELRTTPFPFTCPHGRPTIL 603
>gi|312863945|ref|ZP_07724182.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus vestibularis F0396]
gi|311100511|gb|EFQ58717.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus vestibularis F0396]
Length = 645
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 194/400 (48%), Gaps = 51/400 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V +++ D+
Sbjct: 1 MTKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A G
Sbjct: 61 GEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAADG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + V K + E +D VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 EAYGTKLVAKAGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F ++ + L S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+D E+SGY+S P + + + + + IN RY+ + LLN A FD G
Sbjct: 227 SDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD---------G 271
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ G + P +++++ L D+ P K V + ++ I AI + ++
Sbjct: 272 Y--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMVLISSAIAQSLREQ 329
Query: 354 IAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 391
D++ DA L S+R + T L PLK
Sbjct: 330 --------DLIPDALENLAKSSTRGAAKSVQTSL---PLK 358
>gi|126663375|ref|ZP_01734373.1| DNA mismatch repair protein [Flavobacteria bacterium BAL38]
gi|126625033|gb|EAZ95723.1| DNA mismatch repair protein [Flavobacteria bacterium BAL38]
Length = 617
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 168/345 (48%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDA A+ + + V V+V+D+G G
Sbjct: 6 IQLLPDHVANQIAAGEVVQRPASVVKELLENAVDAKASDIKLIVKEAGKTLVQVIDNGLG 65
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ L ERHATSK+ D+ D + T GFRGEALASI+ ++ +E+ TK
Sbjct: 66 MNTTDARLCFERHATSKIRQAEDLFD---LHTKGFRGEALASIAAIAHVEMKTKQDQEEL 122
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V++GSK + + K GT+ ++LF+N P RR +++S + H V R
Sbjct: 123 GNHIVIEGSKLVKQEVAVLPK--GTSFAVKNLFFNIPARRNFLKSETVEFRH-VMDEFQR 179
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+A+ HP +SF I SE L SS+ +++ FG + L V + + ISG
Sbjct: 180 VAMAHPSISFTLIHNGSE---LYNLPSSNYRQRIVNIFGGKTNEKLVPVTEDTDLITISG 236
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + + Q+ ++N RY+ +H + A G LK
Sbjct: 237 FVGKPEFAKKSRGEQFFFVNDRYIKSAYLHHAI------------MNAYEGLLKEGNQ-- 282
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P+Y L L+ P D+ P KT + F D + A + A++
Sbjct: 283 ---PSYFLYLQVPPHTIDINIHPTKTEIKFDDEHSLYAILRSAVK 324
>gi|422861711|ref|ZP_16908351.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK330]
gi|327467944|gb|EGF13434.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK330]
Length = 647
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 170/356 (47%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 118 GQHGTLLVAQGGE-----IEEHEPASSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 173 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G SK P ++N++ L D+ P K V ++ I +AI ++
Sbjct: 271 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMDLISQAIATSL 326
>gi|419520162|ref|ZP_14059761.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05245]
gi|379541786|gb|EHZ06951.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA05245]
Length = 649
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 205/437 (46%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + + + + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYSLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLALFAK 396
>gi|410031400|ref|ZP_11281230.1| DNA mismatch repair protein MutL [Marinilabilia sp. AK2]
Length = 627
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 174/351 (49%), Gaps = 34/351 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+A+ N + +G V+ ++EL+ N++DAGAT++ V V ++V+D+G G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASALKELMENAIDAGATQIQVLVKEAGKMLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ +D I TFGFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSLTDARMSFERHATSKI---RTSEDLFAIRTFGFRGEALASIAAVAQVEMRTREKGAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G ++GS+ +++ + GT ++ ++LF+N P RR +++S+P ++ H V++
Sbjct: 122 GTLIQIEGSEI------KKQEPISCIEGTHILVKNLFFNVPARRNFLKSNPVEMRHMVEE 175
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
R+AL +P+V F +++ EL + ++ FG L L
Sbjct: 176 -FQRVALAYPEVGFSLT--QNDMELFNLPAGGKLSQRIVGLFGKSYQGQLVACQEETPHL 232
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ GYI P + + QY ++N+R++ +H H A+ A G +
Sbjct: 233 NVKGYIGKPEQAKKTRGEQYFFVNNRFIKSNYLH----HAVAN--------AYEGLM--- 277
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
S P Y+L L S D+ P KT + F D V A + A++ A
Sbjct: 278 --PSDMHPFYVLFLEIDPSHIDINVHPTKTEIKFDDERTVYAVVRSAVKQA 326
>gi|320529999|ref|ZP_08031075.1| DNA mismatch repair protein [Selenomonas artemidis F0399]
gi|320137796|gb|EFW29702.1| DNA mismatch repair protein [Selenomonas artemidis F0399]
Length = 621
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 174/356 (48%), Gaps = 32/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+ELV N++DAGAT + + + G +++V D+
Sbjct: 1 MTRIHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGATAIEIEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R RHATSK+ ++AD+ +GT GFRGEAL +I+ VS +IT+
Sbjct: 61 GRGMERSDAETAILRHATSKISNVADLQT---VGTLGFRGEALPTIASVSRFSLITRTAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G K I+D DVGTTV DLF+N P R+K+++ + +
Sbjct: 118 ADLGTRVEILGGKTTE--IEDAGCDVGTTVRVEDLFFNTPARKKFLKMD-RTEAGKISDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND--GA 237
V+ +AL P ++F+F++ + L T S + S +G + L ++ D G
Sbjct: 175 VIMLALSRPDIAFRFVN--NNRLTLMTAGDDSLRRAIESIYGGDAAGALIPLDFTDEAGD 232
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ I+GYIS P S +A+Q +N R + I K ++++ + GF
Sbjct: 233 IRITGYISKPSMIRSSRAWQTYIVNGRTIQNRAIAKAIDNV------YRALVPKMGF--- 283
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA 349
P +L + P D+ P KT + F+D ++ V ++ A+R A
Sbjct: 284 --------PLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKTVQGAVRGA 331
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 50/204 (24%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1215
+ QVD +I + L +IDQHAA ERI + L H +LS + +
Sbjct: 435 IGQVDLTYIVAQSTRALYIIDQHAAHERILFDRFCALAEGIPSQQMLVHAILSFDARETQ 494
Query: 1216 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
Y++ EL +G+++ G R + L
Sbjct: 495 YIEENAEL-FSRLGFRM-----------------EPAGDREYR--------------LTE 522
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV--LNSKACRGAIMFGDSLLPSEC 1333
P + ++ + E L L + ++ P+ LR L + ACR AI G+ L +
Sbjct: 523 SPADVPTDEAEDVIREILVSLGELHAAT---PAELRQAGLATMACRAAIKAGEELSFRQM 579
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTV 1357
+++EEL+ T F C HGRPT +
Sbjct: 580 EILLEELRTTPFPFTCPHGRPTIL 603
>gi|78187823|ref|YP_375866.1| DNA mismatch repair protein [Chlorobium luteolum DSM 273]
gi|123743593|sp|Q3B1F8.1|MUTL_PELLD RecName: Full=DNA mismatch repair protein MutL
gi|78167725|gb|ABB24823.1| DNA mismatch repair protein MutL [Chlorobium luteolum DSM 273]
Length = 626
Score = 140 bits (354), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 172/359 (47%), Gaps = 43/359 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M +I RLP+ V N + +G V+ VV+EL+ N++D+GA ++ V + V+++D+
Sbjct: 1 MPSIARLPDNVANKISAGEVVQRPASVVKELLENAIDSGADRISVVIKDAGRELVRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+SR +L ER ATSKL D+DD +GT GFRGEALASIS VS E+ T+
Sbjct: 61 GRGMSRADALLSVERFATSKL---RDVDDLDTLGTLGFRGEALASISSVSHFELRTRMTD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
P R +G GI E +V GT+V R+LFYN P RRK+++S+ + H
Sbjct: 118 APVALRFRYEG------GIAVEESEVQGEAGTSVSVRNLFYNVPARRKFLKSNATEYGH- 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
+ + V +L +P++ ++ ++ +D+ L +S L L + +G L EV +
Sbjct: 171 IFELVRSFSLAYPEIQWQLLN---DDQELFNFRTSDMLERLDTFYGKGFADSLIEVGEEN 227
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
L I GYI P K QY +IN R + + + L A
Sbjct: 228 DYLSIRGYIGRPALQKRKKLDQYFFINRRPIQNRMLTQALQQAYAELLV----------- 276
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
+ P LL L S D+ P K V F D ER++R+ + I
Sbjct: 277 ------ERQAPFALLFLGIDPSRVDVNVHPAKLEVRFDD--------ERSVRNMFYPVI 321
>gi|385813212|ref|YP_005849605.1| DNA mismatch repair protein mutL [Lactobacillus helveticus H10]
gi|403514451|ref|YP_006655271.1| DNA mismatch repair protein MutL [Lactobacillus helveticus R0052]
gi|323465931|gb|ADX69618.1| DNA mismatch repair protein mutL [Lactobacillus helveticus H10]
gi|403079889|gb|AFR21467.1| DNA mismatch repair protein MutL [Lactobacillus helveticus R0052]
Length = 636
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 172/363 (47%), Gaps = 35/363 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ F+ G+ V+
Sbjct: 1 MAKIHELSENLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFIDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI+RD + L RHATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRHATSKISNEHDL---FKVSTLGFRGEALASISAVSHVEIVTAT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
GSK G +D GT + RDLF+N P R KY++ SP+ + +
Sbjct: 116 ENAIGIKADFSGGSKK---GQEDAASQKGTKITVRDLFFNTPARLKYLR-SPRTEIMKIV 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R++L +P VSF + + LL T + + + + +G ++ A D
Sbjct: 172 DIINRLSLGYPHVSFTLSN--TGKVLLRTTGNGNLKQTVANVYGRHIAEKMESFEAKDSD 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+I+G +S P + S + F + +N RY+ +++ NN + G
Sbjct: 230 FKITGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQLNNAIMDG 270
Query: 298 KRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
SK A P ++ + L D+ P K V + + I AI A + K
Sbjct: 271 YASKLAARHYPIVVIAIHVDPLLVDVNVHPTKQEVRLSKEKELSRLITGAISDALLDKTE 330
Query: 356 HDS 358
S
Sbjct: 331 QSS 333
>gi|257866606|ref|ZP_05646259.1| DNA mismatch repair protein [Enterococcus casseliflavus EC30]
gi|257872878|ref|ZP_05652531.1| DNA mismatch repair protein [Enterococcus casseliflavus EC10]
gi|257800564|gb|EEV29592.1| DNA mismatch repair protein [Enterococcus casseliflavus EC30]
gi|257807042|gb|EEV35864.1| DNA mismatch repair protein [Enterococcus casseliflavus EC10]
Length = 702
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 169/353 (47%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I L E + N + +G V+ VV+ELV N+VDAG+T++ +++ ++V+D+
Sbjct: 1 MGKIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ +RHATSK + + DD I T GFRGEAL SI+ VS+L I T
Sbjct: 61 GEGIAEEDVLTAFKRHATSK---IHNRDDLFRIRTLGFRGEALPSIASVSILSIETAVKD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G +KG + R+ GT + +LFYN P R KY+++ + L ++
Sbjct: 118 AQQGSFVRLKGGAVEEHLPANLRQ--GTKITVENLFYNTPARLKYVKTLQTE-LANIGDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIAL HP+V+F+ + +++L T S + +G+E + ++ D +
Sbjct: 175 VNRIALSHPEVAFRLV--HEGNKMLSTTGSGQLKQTIAGIYGVETAKKMIAIDTEDLDFK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + + + + IN RY+ ++ N + G
Sbjct: 233 VTGFVSLPEVTRASRNYLSTIINGRYI-------------------RNFALNKAIVAGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SK P +L ++ L D+ P K V E + I +AI A
Sbjct: 274 SKLMVGRFPLAVLEIKMDPLLVDVNVHPTKQEVRLSKEEELTKLISKAINEAL 326
>gi|322377273|ref|ZP_08051765.1| DNA mismatch repair protein HexB [Streptococcus sp. M334]
gi|321281986|gb|EFX58994.1| DNA mismatch repair protein HexB [Streptococcus sp. M334]
Length = 649
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 214/464 (46%), Gaps = 48/464 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVGLALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVEG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L H ++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHHEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPSKQEVRISKEKELMTLVSEAISNSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + ++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNRQKVEQTIL---PLKE-----NTLYYENTEPTRPSQAEVAD 379
Query: 416 DPVELAEENTEMEFFSQPK--HSSSLLDGSFAECLPIVPPKIDH 457
VEL +E ++ F++ + FAE P+ ++DH
Sbjct: 380 YQVELTDEGQDLTLFAKETLDQLTKPAKLHFAERKPVNYDQLDH 423
>gi|393789468|ref|ZP_10377589.1| DNA mismatch repair protein mutL [Bacteroides nordii CL02T12C05]
gi|392650916|gb|EIY44582.1| DNA mismatch repair protein mutL [Bacteroides nordii CL02T12C05]
Length = 627
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 185/377 (49%), Gaps = 45/377 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEACNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRLEAEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + + GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKLAIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILT 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L SS +++ FG + L V+ N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSE---LFNLPVSSLRQRILAVFGKKLNQQLLSVDVNTTMI 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ISGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 232 KISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q P +Y L + D+ P KT + F++ + + I A++ + K
Sbjct: 274 ----QLIPIGEQISYFLYFEVDPANIDVNIHPTKTEIKFENEQAIWQIISAAVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELP 370
A S D D + ++P
Sbjct: 330 NAVPSIDFDTEDMPDIP 346
>gi|417015926|ref|ZP_11946960.1| DNA mismatch repair protein [Lactobacillus helveticus MTCC 5463]
gi|328462817|gb|EGF34684.1| DNA mismatch repair protein [Lactobacillus helveticus MTCC 5463]
Length = 636
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 174/364 (47%), Gaps = 37/364 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ F+ G+ V+
Sbjct: 1 MAKIHELSENLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFIDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI+RD + L RHATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRHATSKISNEHDL---FKVSTLGFRGEALASISAVSHVEIVTAT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
GSK G +D GT + RDLF+N P R KY++ SP+ + +
Sbjct: 116 ENAIGIKADFSGGSKK---GQEDAASQKGTKITVRDLFFNTPARLKYLR-SPRTEIMKIV 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDG 236
+ R++L +P VSF + + ++L + + L +++ +G ++ A D
Sbjct: 172 DIINRLSLGYPHVSFT---LSNTGKVLFRTTGNGNLKQTVANVYGRHIAEKMESFEAKDS 228
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+I+G +S P + S + F V +N RY+ +++ NN +
Sbjct: 229 DFKITGLMSKPVLTRSTRNFISVLLNGRYI-------------------KNFQLNNAIMD 269
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK A P ++ + L D+ P K V + + I AI A + K
Sbjct: 270 GYGSKLAARHYPIVVIAIHVDPMLVDVNVHPTKQEVRLSKEKELSRLITGAISDALLDKT 329
Query: 355 AHDS 358
S
Sbjct: 330 EQSS 333
>gi|379706198|ref|YP_005204657.1| DNA mismatch repair protein mutL [Streptococcus infantarius subsp.
infantarius CJ18]
gi|374682897|gb|AEZ63186.1| DNA mismatch repair protein mutL [Streptococcus infantarius subsp.
infantarius CJ18]
Length = 646
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 173/357 (48%), Gaps = 46/357 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + G+ N ++V
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEESGLKN--IQVT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GIS++ + L RHATSK+ AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 59 DNGEGISQEDVALSLHRHATSKIKSQADL---FRIRTLGFRGEAIPSIASISHFTVKTAT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKV 172
G V KG + ER++ VGT + +LFYN P R KYM+S ++
Sbjct: 116 ADEHYGTLLVAKGGEI-------ERQEAISTPVGTKITVENLFYNTPARLKYMKSLQSEL 168
Query: 173 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEV 231
H V V R++L HP+++F I+ + + T S + L I+ +G+ + E+
Sbjct: 169 AHIV-DVVNRLSLAHPEIAFTLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEI 224
Query: 232 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 291
+ D E+SGYIS P + + + + + IN RY+ ++ N
Sbjct: 225 SNADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLN 265
Query: 292 NGFLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 266 RAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMGLISSAI 322
>gi|119356019|ref|YP_910663.1| DNA mismatch repair protein MutL [Chlorobium phaeobacteroides DSM
266]
gi|166232082|sp|A1BCW2.1|MUTL_CHLPD RecName: Full=DNA mismatch repair protein MutL
gi|119353368|gb|ABL64239.1| DNA mismatch repair protein MutL [Chlorobium phaeobacteroides DSM
266]
Length = 624
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 176/356 (49%), Gaps = 37/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I RLP+ V N + +G V+ V++EL+ N++DA A+K+ V + V++VD+
Sbjct: 1 MAKIARLPDNVANKISAGEVVQRPASVIKELLENAIDACASKITVTIKDAGKELVQIVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+SR +L ER ATSK+ + D+D + + GFRGEAL SI+ VS E+ TK G
Sbjct: 61 GIGMSRQDALLSVERFATSKISGVEDLD---SLMSLGFRGEALPSIASVSQFELKTKPEG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G+R G + + + K GTT+ R+LFYN P RRK+++S+ + H + +
Sbjct: 118 ALLGFRFRCDGGEPVEESEVNAEK--GTTITVRNLFYNVPARRKFLKSNATEFRH-IFES 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSF-LDEVNANDGAL 238
V +AL +P++ +K M S+DE L + L + +G E+FS L V+ + L
Sbjct: 175 VKSLALAYPEIEWK---MVSDDEELFHFRTPDIYERLDAFYG-ENFSLSLIPVSEENDYL 230
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
ISG++ P K QY+Y+N R + + + L G+
Sbjct: 231 SISGFLGKPGMQKRQKLDQYIYVNRRIIQNRMLSQALQQAY-----------------GE 273
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
+ P LL L S D+ P K V F+D ER++R+ + I
Sbjct: 274 LLVERQAPFALLFLGIDPSRIDVNVHPAKLEVKFED--------ERSVRTMFYPVI 321
Score = 43.1 bits (100), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 23/197 (11%)
Query: 1165 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV 1224
D K+ Q +K I + G + +IDQH A ER+ L E V++ + L Q++
Sbjct: 437 DPKIWQLHNKYIICQIKTGMM-IIDQHVAHERV-LYERAVDVMNQNVPNSQQLLFPQKIE 494
Query: 1225 LPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFN-KNLNLLQRQITVITLLA-VPCIFGV 1282
L Y++ + + + G+ N+ + G+++ + + R T +T+L + F
Sbjct: 495 LRAWEYEVFEEIRDDLYRLGF--NLRSFGAKTVMIEGIPQDVRPGTEVTILQDMITEFQE 552
Query: 1283 NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQ 1342
N S + L E + LA S +CR AIM G L E +++ L
Sbjct: 553 NSSKLKL-ERRENLA----------------RSYSCRNAIMAGQKLSLEEMRSLIDNLFA 595
Query: 1343 TSLCFQCAHGRPTTVPL 1359
T + + C HGRP + L
Sbjct: 596 TRVPYTCPHGRPVIIKL 612
>gi|262408157|ref|ZP_06084704.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294645117|ref|ZP_06722842.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides
ovatus SD CC 2a]
gi|294809731|ref|ZP_06768418.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides
xylanisolvens SD CC 1b]
gi|345510158|ref|ZP_08789726.1| DNA mismatch repair protein mutL [Bacteroides sp. D1]
gi|229445488|gb|EEO51279.1| DNA mismatch repair protein mutL [Bacteroides sp. D1]
gi|262353709|gb|EEZ02802.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639541|gb|EFF57834.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides
ovatus SD CC 2a]
gi|294443065|gb|EFG11845.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides
xylanisolvens SD CC 1b]
Length = 633
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 186/394 (47%), Gaps = 45/394 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIRQAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R V+ GS+ + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRLVIAGSQV------ESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L S +++ FG + L + N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ISGY++ P + A QY ++N RY+ HK +
Sbjct: 232 KISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV----------------------M 269
Query: 299 RSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ Q P +Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 270 EAYEQLIPTGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS 387
A S D D + ++P + S H ++
Sbjct: 330 SAIPSIDFDTEDMPDIPAFEEKMSSEPPKIHYNT 363
>gi|161506973|ref|YP_001576927.1| DNA mismatch repair protein [Lactobacillus helveticus DPC 4571]
gi|172048183|sp|A8YTI0.1|MUTL_LACH4 RecName: Full=DNA mismatch repair protein MutL
gi|160347962|gb|ABX26636.1| DNA mismatch repair protein [Lactobacillus helveticus DPC 4571]
Length = 636
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 174/364 (47%), Gaps = 37/364 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ F+ G+ V+
Sbjct: 1 MAKIHELSENLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFIDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI+RD + L RHATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRHATSKISNEHDL---FKVSTLGFRGEALASISAVSHVEIVTAT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
GSK G +D GT + RDLF+N P R KY++ SP+ + +
Sbjct: 116 ENAIGIKADFSGGSKK---GQEDAASQKGTKITVRDLFFNTPARLKYLR-SPRTEIMKIV 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDG 236
+ R++L +P VSF + + ++L + + L +++ +G ++ A D
Sbjct: 172 DIINRLSLGYPHVSFT---LSNTGKVLFRTTGNGNLKQTVANVYGRHIAEKMESFEAKDS 228
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+I+G +S P + S + F + +N RY+ +++ NN +
Sbjct: 229 DFKITGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQLNNAIMD 269
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK A P ++ + L D+ P K V + + I AI A + K
Sbjct: 270 GYGSKLAARHYPIVVITIHVDPMLVDVNVHPTKQEVRLSKEKELSRLITDAISDALLDKT 329
Query: 355 AHDS 358
S
Sbjct: 330 EQSS 333
>gi|167752896|ref|ZP_02425023.1| hypothetical protein ALIPUT_01158 [Alistipes putredinis DSM 17216]
gi|167659965|gb|EDS04095.1| DNA mismatch repair domain protein [Alistipes putredinis DSM 17216]
Length = 629
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 180/372 (48%), Gaps = 32/372 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LPE V N + +G V+ + VV+E++ N++DAGA V V + +++VDDG G
Sbjct: 5 IKLLPEVVANQIAAGEVVNRPSSVVKEMMENAIDAGARSVKVNFRDGGKELIQIVDDGCG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + +RHATSK+ L DD + TFGFRGEALASI+ VS +E+ T+
Sbjct: 65 MSPIDARMAFDRHATSKISSL---DDIYALKTFGFRGEALASIAAVSQVELRTRQAEDEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + G + ++ VG+ R+LFYN P RRK+++ S +K R
Sbjct: 122 GTLTTVNGGE--FVSQTLAACPVGSQFYVRNLFYNVPARRKFLEKSTTST-GQIKSEFQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL +P+V F+ + D+ L ++S + ++ G L EV+A+ + ++G
Sbjct: 179 VALCNPQVGFELL---MNDQPLYRLPAASLASRIVDVVGRHIKQNLLEVDADTSIVRVTG 235
Query: 243 YISSPYDS-ISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG-KRS 300
++ P + S + QY+++N RY F +KA LK ++
Sbjct: 236 FVGRPAAAKKSNSSEQYLFVNGRY----------------FRSPYFFKA---ILKAYEKL 276
Query: 301 KSQAC-PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
AC P+Y L L S D+ P KT V F D E V I A+R K A
Sbjct: 277 IPDACSPSYFLYLTIDPSRIDVNVHPQKTEVKFADEEAVWQIINAAVRETLAKTGAVPLM 336
Query: 360 DVDMLEDAELPL 371
D D + E+P+
Sbjct: 337 DFDQTDSVEIPV 348
>gi|160882395|ref|ZP_02063398.1| hypothetical protein BACOVA_00344 [Bacteroides ovatus ATCC 8483]
gi|293369507|ref|ZP_06616086.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides
ovatus SD CMC 3f]
gi|299148151|ref|ZP_07041213.1| DNA mismatch repair protein MutL [Bacteroides sp. 3_1_23]
gi|336415749|ref|ZP_08596088.1| DNA mismatch repair protein mutL [Bacteroides ovatus 3_8_47FAA]
gi|423292377|ref|ZP_17270955.1| DNA mismatch repair protein mutL [Bacteroides ovatus CL02T12C04]
gi|156112208|gb|EDO13953.1| DNA mismatch repair domain protein [Bacteroides ovatus ATCC 8483]
gi|292635392|gb|EFF53905.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides
ovatus SD CMC 3f]
gi|298512912|gb|EFI36799.1| DNA mismatch repair protein MutL [Bacteroides sp. 3_1_23]
gi|335940628|gb|EGN02495.1| DNA mismatch repair protein mutL [Bacteroides ovatus 3_8_47FAA]
gi|392661786|gb|EIY55359.1| DNA mismatch repair protein mutL [Bacteroides ovatus CL02T12C04]
Length = 633
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 189/401 (47%), Gaps = 49/401 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G + V+ GS+ E ++ G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKLVIAGSQV-------ESQEAISCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
RIALVHP+V+F +SE L S +++ FG + L ++ N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIDVNTTM 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 231 VKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------------------- 268
Query: 298 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
+ Q PA Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 269 MEAYEQLIPAGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 353 KIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS--SPLK 391
A S D D + ++P + S H ++ +P K
Sbjct: 329 FSAIPSIDFDTEDMPDIPAFEEKISSEPPKVHYNTDYNPFK 369
>gi|58266232|ref|XP_570272.1| mismatch repair-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57226505|gb|AAW42965.1| mismatch repair-related protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 759
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 161/292 (55%), Gaps = 17/292 (5%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC--NCYVKVVD 58
M I LP T+RS +L L ++ EL+ NS+DA ATK+ YV + N ++V D
Sbjct: 1 MPNILPLPRPTSTTLRSSIILPSLAQIFSELLQNSLDAEATKIECYVNLAKGNETLRVED 60
Query: 59 DGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 118
+G+GIS++GL +G+R TSK H + +G++GFRGEALASI+ +SLL+I T+
Sbjct: 61 NGTGISKNGLAKIGKRFRTSKEIHEGGLGP---VGSYGFRGEALASIASLSLLDITTRRA 117
Query: 119 GRPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
P Y K+++ SK L+ G + +R GTTVV R++F PVRR+ + ++ +L S
Sbjct: 118 SFPV-YTKILRHSKTLFEGPNPDRHIAGGQGTTVVVREIFRTIPVRREELAATSSTLLMS 176
Query: 176 -VKKCVLRIALVHPKVSFKFIDMESE-----DELLCTCSSSSPLALLISSFGIEDFSFLD 229
+KK V +AL +P V + + ++ ++ +S S L + + +G +
Sbjct: 177 QLKKVVETLALGNPGVRWVLWEEKTTTTGGLKRIMSINASDSALDVFKTLYGGALVQSVQ 236
Query: 230 EVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAAS 281
++ G ++ G+IS D KA Q++YIN+ + +G +H + AS
Sbjct: 237 KIKVTAGKRKVDGFISISGD--VSKAHQHLYINNYPIDRGDVHTAIAKKFAS 286
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 114/249 (45%), Gaps = 48/249 (19%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGG-----TLAVIDQHAADERIRLEELRHKVLSGEGK 1212
I+KS L +A VL QVD+KFI VV TLA+IDQHAADER+ +E++ ++ G K
Sbjct: 480 ISKSSLSNATVLGQVDRKFIAVVLSTNINLTTLALIDQHAADERVAVEKVLLELCEGFAK 539
Query: 1213 SVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVIT 1272
L AE P I +L QI W+ ++ + L + +
Sbjct: 540 D-DLLVAELAKTRPMI---ILTQAEAQILSQPWVLSLFKRWGIRLTMPPGLSHGEYIQVK 595
Query: 1273 LLAVPC-----------------------IFGVNLSDVDLL-EFLQ--QLADTDGSST-- 1304
+ VP I + S++ +L E L+ + D +G T
Sbjct: 596 VETVPLSLLSRLGRKEGSEMTRLVRGYLPIVAEHASEITVLVENLEGKAMEDNEGGDTEG 655
Query: 1305 -----------TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGR 1353
P +L + NSKACRGAIMF D L +C ++++L QT F CAHGR
Sbjct: 656 YGGDWGRLMRFMPREMLELANSKACRGAIMFEDRLSHDQCDRLIQQLSQTRFPFMCAHGR 715
Query: 1354 PTTVPLVNL 1362
P+ VPLV L
Sbjct: 716 PSMVPLVIL 724
>gi|298480178|ref|ZP_06998376.1| DNA mismatch repair protein MutL [Bacteroides sp. D22]
gi|298273459|gb|EFI15022.1| DNA mismatch repair protein MutL [Bacteroides sp. D22]
Length = 633
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 186/394 (47%), Gaps = 45/394 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIRQAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R V+ GS+ + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRLVIAGSQV------ESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L S +++ FG + L + N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ISGY++ P + A QY ++N RY+ HK +
Sbjct: 232 KISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV----------------------M 269
Query: 299 RSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ Q P +Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 270 EAYEQLIPTGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS 387
A S D D + ++P + S H ++
Sbjct: 330 SAIPSIDFDTEDMPDIPAFEEKISSEPPKIHYNT 363
>gi|288906382|ref|YP_003431604.1| DNA mismatch repair protein mutL [Streptococcus gallolyticus UCN34]
gi|325979396|ref|YP_004289112.1| DNA mismatch repair protein mutL [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386338873|ref|YP_006035042.1| DNA mismatch repair protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288733108|emb|CBI14689.1| DNA mismatch repair protein mutL [Streptococcus gallolyticus UCN34]
gi|325179324|emb|CBZ49368.1| DNA mismatch repair protein mutL [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334281509|dbj|BAK29083.1| DNA mismatch repair protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 647
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 172/355 (48%), Gaps = 42/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI++D + L RHATSK+ + AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 61 GKGIAQDDVALSLHRHATSKIKNQADL---FRIRTLGFRGEAIPSIASISHFTVKTATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G V KG + E+++ VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 ENYGTLLVAKGGEI-------EKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F I+ + + T S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFSLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
D E+SGYIS P + + + + + IN RY+ ++ N
Sbjct: 227 ADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRA 267
Query: 294 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V + +++ I AI
Sbjct: 268 ILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMSLISSAI 322
>gi|336173005|ref|YP_004580143.1| DNA mismatch repair protein mutL [Lacinutrix sp. 5H-3-7-4]
gi|334727577|gb|AEH01715.1| DNA mismatch repair protein mutL [Lacinutrix sp. 5H-3-7-4]
Length = 620
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 173/351 (49%), Gaps = 39/351 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGAT + + ++V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATHIKLILKDAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ DD + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSVTDARLSFERHATSKI---KSADDLFQLNTKGFRGEALASIAAIAHVELKTKQEQDEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G V++GS+ + +DV GT++ ++LF+N P RR +++S+P + H +
Sbjct: 122 GTCIVIEGSEV-------QSQDVVVTPKGTSLSVKNLFFNIPARRNFLKSNPVETRHIID 174
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R+AL HP + F SE + S+ +++ FG + L V +
Sbjct: 175 EF-HRVALAHPSIGFVMYHNGSE---VFNLPVSNYRQRIVNIFGAKTNEKLVPVEEDTEV 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLK 296
L+ISG++ P + + Q+ ++N R++ LNH + ++FD G L
Sbjct: 231 LKISGFVGKPEFAKKTRGEQFFFVNDRFIKSA----YLNHAIGSAFD---------GLL- 276
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
K A +Y LNL D+ P KT + F D + A + A++
Sbjct: 277 ----KDGAHASYFLNLTVNPQTIDINIHPTKTEIKFDDEHTLYAILRSAVK 323
>gi|386820314|ref|ZP_10107530.1| DNA mismatch repair protein MutL [Joostella marina DSM 19592]
gi|386425420|gb|EIJ39250.1| DNA mismatch repair protein MutL [Joostella marina DSM 19592]
Length = 611
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 174/345 (50%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDAG+T + + ++VVD+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELIENAVDAGSTSIKLIIKDAGKTLIQVVDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ D+ + T GFRGEALASI+ ++ +E+ T G
Sbjct: 65 MSVTDARMSFERHATSKIKAAEDL---FQLHTKGFRGEALASIAAIAHVEMNTCQEGDEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + ++GSK + G+ K GT+++ ++LF+N P RR +++S ++ H + + R
Sbjct: 122 GTQLKIEGSKIVDQGVTVTPK--GTSLLVKNLFFNIPARRNFLKSDTVELRHIIDEF-QR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP + F F + SE L +S+ ++ FG + L V + + +SG
Sbjct: 179 VALAHPTIQFDFYNNGSE---LFNLPASNLRQRIVHIFGGKTNEKLVPVEEDTEVVNLSG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+I P + + Q+ ++N+R+V +H + CS A G + K
Sbjct: 236 FICKPEFAKKTRGEQFFFVNNRFVKNSYLHHAV--------CS----AFEGLM-----KE 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
Q P+Y L L S D+ P KT V F D + A + +++
Sbjct: 279 QTHPSYFLFLEVDPSGIDINIHPTKTEVKFDDEHALYAILRASVK 323
>gi|336426863|ref|ZP_08606871.1| hypothetical protein HMPREF0994_02877 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010503|gb|EGN40486.1| hypothetical protein HMPREF0994_02877 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 737
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 178/367 (48%), Gaps = 52/367 (14%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ + VV+ELV N++DAGA V V + C +++V D+
Sbjct: 1 MAEIMLLDSSTIDKIAAGEVVERPSSVVKELVENAMDAGARAVTVEIKEGGCSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI ++ + RHATSK+ +DD + + GFRGEAL+SI+ VS++E+ITK
Sbjct: 61 GGGIEKEQVRKAFFRHATSKI---RTVDDLYQVKSLGFRGEALSSIAAVSMVELITKTRD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
G ++G K + E +V GTT++ R+LF+N PVR+K+++S + +
Sbjct: 118 ELTGIHYRLEGEK------EREFSEVGAPEGTTIIVRELFFNTPVRKKFLKSYATEGSY- 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
+ + +AL P+V+F+F M + T + +L +G E L +A
Sbjct: 171 ISDLMEHMALSRPEVAFQF--MMNGQVRFHTSGNGDIREILYRIYGREIIKELIPFSAQA 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
L+I G++ SP S + F++ ++N RY+ K P+ L L A +
Sbjct: 229 EGLQIEGFLGSPSVVRSNRNFEFFFVNGRYI-KSPL--LSKGLEAGYK------------ 273
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFD---------PLKTHVVFKDWEPVLAFIERAI 346
AYL+ + P +L T D P K + F D + AF+E +
Sbjct: 274 -----------AYLMQHKFPFALLHFTIDPDRIDVNVHPSKMEIRFHDQPGLYAFLEEKV 322
Query: 347 RSAWMKK 353
R A ++
Sbjct: 323 REALRRR 329
Score = 47.8 bits (112), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 20/214 (9%)
Query: 1151 EFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGE 1210
E F + K ++ ++L QV + L IDQHAA E+++ E L +K+ +G
Sbjct: 534 ELFEEKLLTKEAVQSFRILGQVFDTYWLAQYEDKLLFIDQHAAHEKVKYEALINKMKTGT 593
Query: 1211 GKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV 1270
S L L L LL+ + G+ I G ++
Sbjct: 594 VDS-QMLTPPIVLNLSAREAHLLERYESYFAQMGF--EIDEFGGNAY------------- 637
Query: 1271 ITLLAVPC-IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLL 1329
T+ +VPC ++G + + +E + + + TP + L S AC+ A+ ++
Sbjct: 638 -TVRSVPCDLYG--HYEKEFIEAILDELEEEPPHGTPSVIAEKLASMACKSAVKGNHTMS 694
Query: 1330 PSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
E ++++L + + C HGRPT + + E
Sbjct: 695 FREMEALLDQLLKLENPYHCPHGRPTIITMSKYE 728
>gi|331701279|ref|YP_004398238.1| DNA mismatch repair protein mutL [Lactobacillus buchneri NRRL
B-30929]
gi|329128622|gb|AEB73175.1| DNA mismatch repair protein mutL [Lactobacillus buchneri NRRL
B-30929]
Length = 643
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 183/376 (48%), Gaps = 42/376 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
+ I++LP + N + +G V+ VV+ELV NS+DA ++++ V V +KVVDD
Sbjct: 4 LNEIHKLPTILSNQIAAGEVVERPASVVKELVENSIDAKSSEIDVTVENSGLKLIKVVDD 63
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G+GI + RHATSK +++ D + T GFRGEAL SIS V+ + + T
Sbjct: 64 GNGIDSSQVQTAFLRHATSK---ISEQRDLFRVRTLGFRGEALPSISSVANVRMKTSTGS 120
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G KG K + + RK GTTV LFYN P R KY+ SSP L +
Sbjct: 121 I--GTEVEYKGGKLVTQKASESRK--GTTVEVASLFYNTPARLKYL-SSPNTELSKISDI 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP+++F FI + ELL T +L + +G++ S + + ND ++
Sbjct: 176 VNRLALSHPEIAFSFI--SNGRELLRTSGRGDLRQVLGAIYGVKTVSKMAAIKGNDLDIK 233
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGY+S P + S + + + +N R++ P+ K + A + G +
Sbjct: 234 VSGYVSLPELTRSSRNYISLILNGRFIRNFPLTK---AVIAGY--------------GSK 276
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P ++N+ +L D+ P K V D EP++ K IA+ +
Sbjct: 277 LMIGRFPIAVINIDADPALIDVNVHPTKQEVRISD-EPMIG-----------KLIANAIY 324
Query: 360 DVDMLEDAELPLESSR 375
DML D +L +++R
Sbjct: 325 --DMLRDKQLIPDATR 338
>gi|294139254|ref|YP_003555232.1| DNA mismatch repair protein MutL [Shewanella violacea DSS12]
gi|293325723|dbj|BAJ00454.1| DNA mismatch repair protein MutL [Shewanella violacea DSS12]
Length = 619
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 174/358 (48%), Gaps = 43/358 (12%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ V++ELV NS+DAGAT+V + + +K+ D+GS
Sbjct: 2 TIQILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIKIHDNGS 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI ++ L L RHATSKL L D+D I +FGFRGEALASIS VS L + ++ +
Sbjct: 62 GIPKEELSLALSRHATSKLSSLDDLD---AILSFGFRGEALASISSVSRLTLTSRTAEQS 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ +GS + + + VG+TV + DLF+N P RR++++S + H + + +
Sbjct: 119 EAWQAYAEGSD-MAVKVIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTH-IDEWLK 176
Query: 182 RIALVHPKVSF----------KFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEV 231
RIALV + F F ++ D+ L + S + + +E
Sbjct: 177 RIALVSRDIHFTLKNNGKVVRNFRPAKTSDQYLQRLAQVSGKKFALQALAVE-------- 228
Query: 232 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 291
L++SGYI SPY S QY Y+N R V +L+NH A
Sbjct: 229 -CEHEGLKLSGYIQSPYFEGSASDTQYFYVNGRLVRD----RLVNH------------AV 271
Query: 292 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
+ +QA +L L PH + D+ P K V F V +I +A++SA
Sbjct: 272 RQAFAEHVTGAQASYVLMLELD-PHQV-DVNVHPAKHEVRFHQSRYVHDYIFQALQSA 327
>gi|121533676|ref|ZP_01665503.1| DNA mismatch repair protein MutL [Thermosinus carboxydivorans Nor1]
gi|121307667|gb|EAX48582.1| DNA mismatch repair protein MutL [Thermosinus carboxydivorans Nor1]
Length = 602
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 167/351 (47%), Gaps = 28/351 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVD 58
+ TI L E N + +G V+ VV+ELV NS+DA + + V + G N Y++V D
Sbjct: 2 ITTIRVLDETTANKIAAGEVVERPASVVKELVENSIDAQSRSIEVEIVDGGIN-YIRVSD 60
Query: 59 DGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 118
DG G+S L RHATSK+ DD I + GFRGEAL SI+ VS + T+ H
Sbjct: 61 DGIGMSAADARLAILRHATSKI---RTADDLYNINSLGFRGEALPSIAAVSRFTLTTRLH 117
Query: 119 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
P G ++G L I + VGTTV DLF+N P RRK+++ +P +
Sbjct: 118 AEPIGTYIEIQGG--LVTDIREAGGSVGTTVTVSDLFFNTPARRKFLK-TPATESAYIHD 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
+ +IAL P V+ K I+ ++ ++L T + S +G + + L ++ DG +
Sbjct: 175 ILGKIALARPDVAIKLIN--NKRQVLATTGTGRLFDAAASLYGYKAATELLPLDYTDGDI 232
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I+GY+ P+ S + +Q +N R + + K L+ + S NGF
Sbjct: 233 HITGYVGKPHLLKSSRQWQTWTVNGRTISNRMLSKALD------NAYHSLLPKNGF---- 282
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P ++ + P D+ P K V F D + V + +A+ SA
Sbjct: 283 -------PLAIIQIVIPSDKVDVNVHPQKNEVKFSDEQAVFRAVYKAVLSA 326
>gi|313885802|ref|ZP_07819545.1| DNA mismatch repair protein, C-terminal domain protein
[Porphyromonas asaccharolytica PR426713P-I]
gi|312924706|gb|EFR35472.1| DNA mismatch repair protein, C-terminal domain protein
[Porphyromonas asaccharolytica PR426713P-I]
Length = 646
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 193/394 (48%), Gaps = 40/394 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ +++ELV NS+DA AT++ + + ++V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASMLKELVENSIDAHATQITIELQDAGKELMRVIDDGVG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + +DD + + GFRGEALASI V+ +E++T+
Sbjct: 65 MSPLDARMAFERHATSKI---SSVDDLFTLRSMGFRGEALASIVAVAQIELVTRQADSDI 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
GY+ ++ GS+ + +VGT++ ++LFYN P RR++++ S ++ H + + R
Sbjct: 122 GYKLLINGSEV--ISSSPTVAEVGTSITVKNLFYNVPARRRFLKGSETELRH-IYRQFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+P+++F + SE +L+ S ++ G L + +SG
Sbjct: 179 IALVYPEIAFT---LYSEGKLIRNLPKSDLQHRIVDLLGKSYSKQLIPIEYQGPLANVSG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+I+ P D+ A Q+ ++N RY+ H+ + ++ S
Sbjct: 236 FITLPRDAKRRGAQQFFFVNGRYMKHPYFHRAVMNVFEDLIAPGSQ-------------- 281
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR-----SAWMKKIAHD 357
P Y + + S D+ P KT + F D + + + +R ++ M I
Sbjct: 282 ---PNYFIYFQVDPSRIDVNIHPTKTEIKFLDEQAIFKLLMVVLREHLSTTSAMPAI--- 335
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLK 391
+F D L E+P + + QSS+ L P++
Sbjct: 336 TFSTDQL--IEIPAYDA---TRQSSSTLQPPPVQ 364
>gi|306834545|ref|ZP_07467658.1| DNA mismatch repair protein HexB [Streptococcus bovis ATCC 700338]
gi|304423347|gb|EFM26500.1| DNA mismatch repair protein HexB [Streptococcus bovis ATCC 700338]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 172/355 (48%), Gaps = 42/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI++D + L RHATSK+ + AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 61 GEGIAQDDVALSLHRHATSKIKNQADL---FRIRTLGFRGEAIPSIASISHFTVKTATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G V KG + E+++ VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 ENYGTLLVAKGGEI-------EKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F I+ + + T S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFSLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
D E+SGYIS P + + + + + IN RY+ ++ N
Sbjct: 227 ADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRA 267
Query: 294 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V + +++ I AI
Sbjct: 268 ILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMSLISSAI 322
>gi|306832429|ref|ZP_07465582.1| DNA mismatch repair protein HexB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304425469|gb|EFM28588.1| DNA mismatch repair protein HexB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 647
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 172/355 (48%), Gaps = 42/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI++D + L RHATSK+ + AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 61 GEGIAQDDVALSLHRHATSKIKNQADL---FRIRTLGFRGEAIPSIASISHFTVKTATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G V KG + E+++ VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 ENYGTLLVAKGGEI-------EKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F I+ + + T S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFSLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
D E+SGYIS P + + + + + IN RY+ ++ N
Sbjct: 227 ADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRA 267
Query: 294 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V + +++ I AI
Sbjct: 268 ILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMSLISSAI 322
>gi|380693624|ref|ZP_09858483.1| DNA mismatch repair protein mutL [Bacteroides faecis MAJ27]
Length = 640
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 181/377 (48%), Gaps = 45/377 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++++DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQIIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLAFERHATSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRLESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRLVIAGSKV------ESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+VSF +SE L S +++ FG + L + N +
Sbjct: 175 EFERIALVHPEVSFSLYSNDSE---LFNLPVSPLRQRILAIFGKKLNQQLLNIEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ISGYI+ P + A QY ++N RY+ H+ +
Sbjct: 232 KISGYIAKPETARKKGAHQYFFVNGRYMRHPYFHRAV----------------------M 269
Query: 299 RSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ Q P +Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 270 EAYEQLIPVGEQVSYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELP 370
A S D D + E+P
Sbjct: 330 SAIPSIDFDTEDMPEIP 346
>gi|302386430|ref|YP_003822252.1| DNA mismatch repair protein MutL [Clostridium saccharolyticum WM1]
gi|302197058|gb|ADL04629.1| DNA mismatch repair protein MutL [Clostridium saccharolyticum WM1]
Length = 639
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 172/354 (48%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ VV+EL+ N++DA AT V V + ++V D+
Sbjct: 1 MPNITVLDQNTINKIAAGEVIERPASVVKELLENAIDARATAVTVEIKEGGTSLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI ++ + L RH+TSK+ ++D + + GFRGEALASI+ VS +E+ITK
Sbjct: 61 GCGIPKEEVSLAFLRHSTSKI---KSVEDLFTVSSLGFRGEALASIAAVSQVELITKTSI 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G + +++ GTT ++R+LFYN P R+K++++ + H V +
Sbjct: 118 GLTGTRYQIDGGQ--ERSMEEVGAPEGTTFIARNLFYNTPARKKFLKTPMTEGAH-VAEL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V ++AL HP+VS +FI ++ L T + + ++ + FG E + L EV +
Sbjct: 175 VEKLALSHPEVSIRFI--QNNQNKLHTSGNHNLKDIVYTVFGREIAANLLEVTVKKPEVS 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GYI P S + ++ +IN RY+ I + + F +
Sbjct: 233 IHGYIGKPVISRGNRNYENYFINGRYIKSSIISRAIEEAYKPFMMQHKY----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +L+ + D+ P K + F+D E + + +A+ SA K
Sbjct: 282 ------PFTMLHFSIDPEMLDVNVHPTKMELRFRDGEMIYHMVYQAVSSALAHK 329
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 34/187 (18%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIK--- 1241
L +IDQHAA E++ E+ G KS YL +LV P I L QN +K
Sbjct: 470 LYIIDQHAAHEKVLYEKTM-----GTLKSKEYLS---QLVSPPIILTLNQNEEALLKRHL 521
Query: 1242 ----DWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLSDVDLLEFLQQL 1296
D G+ I G R + + VP +F + ++ L+E + L
Sbjct: 522 KYFTDIGF--EIEPFGGREY--------------AVRGVPANLFSIAKKEL-LIEMIDGL 564
Query: 1297 ADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT 1356
++ DGSS +P + + S +C+ A+ G L +E ++++L + C HGRPT
Sbjct: 565 SE-DGSSHSPDIIYEKVASLSCKAAVKGGHRLSAAEANELIDQLLNLENPYACPHGRPTI 623
Query: 1357 VPLVNLE 1363
+ + E
Sbjct: 624 ISMSKYE 630
>gi|357049103|ref|ZP_09110332.1| hypothetical protein HMPREF9478_00315 [Enterococcus saccharolyticus
30_1]
gi|355384403|gb|EHG31471.1| hypothetical protein HMPREF9478_00315 [Enterococcus saccharolyticus
30_1]
Length = 710
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 164/331 (49%), Gaps = 35/331 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I L E + N + +G V+ VV+ELV N+VDAG+T++ +++ ++V+D+
Sbjct: 1 MGKIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + +V +RHATSK + + DD I T GFRGEAL SI+ VS+L I T
Sbjct: 61 GEGIAEEDVVTAFKRHATSK---IHNRDDLFRIRTLGFRGEALPSIASVSILTIETAVKD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G +KG + R+ GT + +LFYN P R KY+++ + L ++
Sbjct: 118 ASQGSFLRLKGGTVEEHIPANLRQ--GTKITVENLFYNTPARLKYVKTLQTE-LANIGDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIAL HP+V+F+ + +++L T S + +G+E + +N+ D +
Sbjct: 175 VNRIALSHPEVAFRLV--HEGNKMLTTTGSGDLKQTIAGIYGVETAKKMLAINSEDLDFK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++GY+S P + + + + IN R C ++ N + G
Sbjct: 233 LTGYVSLPEVTRASRNYLSTIINGR-------------------CIRNFALNKAIVAGYG 273
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHV 330
SK L+ R P ++ ++T DPL V
Sbjct: 274 SK-------LMVGRFPIAVLEITMDPLLVDV 297
>gi|242022721|ref|XP_002431787.1| DNA mismatch repair protein, putative [Pediculus humanus corporis]
gi|212517112|gb|EEB19049.1| DNA mismatch repair protein, putative [Pediculus humanus corporis]
Length = 1233
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 177/355 (49%), Gaps = 18/355 (5%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSG 62
+I +LP +SG V+ DL + V ELV+N++DA ++ + + V + ++V+D+G+G
Sbjct: 2 SIQKLPPEAIVKFQSGNVITDLVQSVLELVYNALDAESSTILIRVDLKKFLIQVIDNGNG 61
Query: 63 ISRDGLVLLGERHATSKLG-HLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGR 120
I L +GER+ TSK H I T+G++G+AL+S+ +V L I T+ G
Sbjct: 62 IGISDLEKVGERYMTSKYNSHFC------SINTYGYKGQALSSLVEVCKTLRIETRTKGD 115
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
K + + L + +KDVGT V D ++ PVR+K + L +K +
Sbjct: 116 NVTAIKTFENGRMLNILHTSTKKDVGTFVSVEDFMFSMPVRKKRINEVFD--LEELKTQL 173
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
++L+H KVSF + L T ++S L FG+ +L + +D I
Sbjct: 174 KYLSLIHHKVSFTLKNEHKNLILFQTQPTNSILESTKKIFGVTMTKYLKKTTFSDNVFLI 233
Query: 241 SGYIS-SPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
G IS P S S+ Q +Y+N+R + KG IHK++N + ++ S K+ + +
Sbjct: 234 KGLISKKPRLSSSL---QLIYVNNRVIAKGSIHKVVNDMISNHIKEMSIKSASSLEEKIV 290
Query: 300 SKSQACP---AYLLNLRCPHSLYDL-TFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
KS P Y++ + C S Y+L T + K V FK+W+ + +AI+ +
Sbjct: 291 LKSLINPTHNVYVIKIYCSLSEYELFTTNLRKNKVKFKNWDVLKNCFRKAIKKVF 345
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 115/247 (46%), Gaps = 33/247 (13%)
Query: 1160 KSCLEDAKVLQQVDKKFIP---VVAG----GTLAVIDQHAADERIRLEELRHK-----VL 1207
K L + +++ Q+DKKFI +V G + + DQHA DERIRLE+L ++ +L
Sbjct: 991 KELLSEVEIIGQLDKKFIVAKMIVEGPKRKELITLFDQHAVDERIRLEKLMNENSTDYIL 1050
Query: 1208 SGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQ 1267
+ L E L E +++ +F EQ + G C T + +L +
Sbjct: 1051 DNDVFLSTPLTPAIECSLNESMVEIVTSFHEQFEKIGLDCQPLTDKT--------ILVKS 1102
Query: 1268 ITVITLLAVPCI---------FGVNLSDVDLLEFLQQLADTDGSSTTPPSVL-RVLNSKA 1317
I L C F +L + + L++L T G+ P +L + S+A
Sbjct: 1103 IP--KFLTDKCTKAKKSCQDSFIKSLIETLIRSALEELTATRGTILKVPKILHKYFCSEA 1160
Query: 1318 CRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLNNSSE 1377
C AI F L E + +++ELK L FQCAHGRP+ +P+V++E ++ N +
Sbjct: 1161 CHNAIKFNKKLSLGEMSQMIKELKNCKLPFQCAHGRPSLIPIVDVEEFKNLTEEMANVKK 1220
Query: 1378 LWHGLHR 1384
+ GL +
Sbjct: 1221 I-SGLKK 1226
>gi|171778536|ref|ZP_02919663.1| hypothetical protein STRINF_00515 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282759|gb|EDT48183.1| DNA mismatch repair domain protein [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 646
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 173/357 (48%), Gaps = 46/357 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + G+ N ++V
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEESGLKN--IQVT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GIS++ + L RHATSK+ AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 59 DNGEGISQEDVALSLHRHATSKIKSQADL---FRIRTLGFRGEAIPSIASISHFTVKTAT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKV 172
G V KG + ER++ VGT + +LFYN P R KYM+S ++
Sbjct: 116 ADEHYGTLLVAKGGEI-------ERQEAISTPVGTKITVENLFYNTPARLKYMKSLQSEL 168
Query: 173 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEV 231
H V V R++L HP+++F I+ + + T S + L I+ +G+ + E+
Sbjct: 169 AHIV-DVVNRLSLAHPEIAFTLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEI 224
Query: 232 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 291
+ D E+SGYIS P + + + + + IN RY+ ++ N
Sbjct: 225 SNADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLN 265
Query: 292 NGFLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 266 RAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMGLISSAI 322
>gi|423294558|ref|ZP_17272685.1| DNA mismatch repair protein mutL [Bacteroides ovatus CL03T12C18]
gi|392675749|gb|EIY69190.1| DNA mismatch repair protein mutL [Bacteroides ovatus CL03T12C18]
Length = 633
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 189/401 (47%), Gaps = 49/401 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G + V+ GS+ E ++ G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKLVIAGSQV-------ESQEAISCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
RIALVHP+V+F +SE L S +++ FG + L ++ N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIDVNTTM 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 231 VKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------------------- 268
Query: 298 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
+ Q PA Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 269 MEAYEQLIPAGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 353 KIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS--SPLK 391
A S D D + ++P + S H ++ +P K
Sbjct: 329 FSAIPSIDFDTEDMPDIPAFEEKISSEPPKVHYNTDYNPFK 369
>gi|193213544|ref|YP_001999497.1| DNA mismatch repair protein MutL [Chlorobaculum parvum NCIB 8327]
gi|238692607|sp|B3QL59.1|MUTL_CHLP8 RecName: Full=DNA mismatch repair protein MutL
gi|193087021|gb|ACF12297.1| DNA mismatch repair protein MutL [Chlorobaculum parvum NCIB 8327]
Length = 626
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 176/355 (49%), Gaps = 33/355 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDD 59
M +I +LP+ V N + +G V+ VV+EL+ NS+D+GA+ + V + V+++D+
Sbjct: 1 MPSIAKLPDIVANKISAGEVVQRPASVVKELLENSIDSGASAITVVIKEAGRQLVRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ D +L ER ATSK+ +D+DD + T GFRGEALASIS VS E+ T+
Sbjct: 61 GCGMDSDDALLSVERFATSKI---SDVDDLNALRTLGFRGEALASISSVSHFELKTRRQS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G + + G + G + + GT++ R+LF+N P RRK+++S+ + H + +
Sbjct: 118 EPVGIQLISNGGEI--EGPQPAQCEPGTSISVRNLFFNVPARRKFLKSNATEFKH-IHET 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFS-FLDEVNANDGAL 238
V L +P++ ++ I+ + E T L S F E F L EV + +
Sbjct: 175 VKAFVLAYPEIEWRLINDDHELFYFRTPDVRERL----SHFYGEGFGESLIEVTEENDYM 230
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I GY+ P + K QY YIN R + + + + A L+ +
Sbjct: 231 TIGGYLGKPGMMVRQKYDQYFYINRRLIQNRMLVQAVQQAYAE------------LLEER 278
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEP----VLAFIERAIRSA 349
+S P LL L SL D+ P K V F+D + V ++RA+R+A
Sbjct: 279 QS-----PFALLFLGLDPSLVDVNVHPAKLEVKFEDEKSIRSMVYPVVKRAVRTA 328
>gi|312865750|ref|ZP_07725972.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus downei F0415]
gi|311098625|gb|EFQ56847.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus downei F0415]
Length = 651
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 167/349 (47%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV N++DAG+T++ V + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVVERPSSVVKELVENAIDAGSTQITVEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI D + L RHATSK+ + AD+ I T GFRGEAL SI+ +S L I T G
Sbjct: 61 GQGIENDDVALSLRRHATSKIKNQADL---FRIRTLGFRGEALPSIASISDLTIKTAVKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G V KG + L + VGT + DLF+N P R KYM+S ++ H V
Sbjct: 118 ADYGTLLVAKGGEI--LSQEPISTPVGTKITVEDLFFNTPARLKYMKSLQAELGHIV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R +L HP+++F I+ EL T + + +G+ + E++ +D +
Sbjct: 175 INRQSLGHPEIAFILIN--EGRELTKTAGTGDLRQAIAGIYGLTTAKKMVEISNSDLDFK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 233 VSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGYG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
SK P +++++ L D+ P K V + ++ I AI
Sbjct: 274 SKLMVGRFPLAVIDIQIDPYLADVNVHPTKQEVRISKEKELMQLIREAI 322
>gi|227877608|ref|ZP_03995662.1| DNA mismatch repair protein MutL [Lactobacillus crispatus JV-V01]
gi|256844549|ref|ZP_05550035.1| DNA mismatch repair protein MutL [Lactobacillus crispatus
125-2-CHN]
gi|256849062|ref|ZP_05554495.1| DNA mismatch repair protein mutL [Lactobacillus crispatus MV-1A-US]
gi|262047544|ref|ZP_06020499.1| DNA mismatch repair protein MutL [Lactobacillus crispatus MV-3A-US]
gi|312977891|ref|ZP_07789637.1| DNA mismatch repair protein HexB [Lactobacillus crispatus CTV-05]
gi|227862802|gb|EEJ70267.1| DNA mismatch repair protein MutL [Lactobacillus crispatus JV-V01]
gi|256613627|gb|EEU18830.1| DNA mismatch repair protein MutL [Lactobacillus crispatus
125-2-CHN]
gi|256713838|gb|EEU28826.1| DNA mismatch repair protein mutL [Lactobacillus crispatus MV-1A-US]
gi|260572120|gb|EEX28685.1| DNA mismatch repair protein MutL [Lactobacillus crispatus MV-3A-US]
gi|310895198|gb|EFQ44266.1| DNA mismatch repair protein HexB [Lactobacillus crispatus CTV-05]
Length = 641
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 178/363 (49%), Gaps = 35/363 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MSKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI+RD + L RHATSK +A+ D + T GFRGEALASIS VS +EI+T A
Sbjct: 59 DNGTGIARDQVDLAFTRHATSK---IANEHDLFKVSTLGFRGEALASISAVSHVEILT-A 114
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G R G G +D GT + +DLF+N P R KY++SS +++ V
Sbjct: 115 TENAIGIRANYSGGNK--KGQEDAAARKGTKITVKDLFFNTPARLKYLRSSRTEIMKIV- 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R+AL +P VSF + + LL T +++ + + +G +++ A D
Sbjct: 172 DIINRLALGYPHVSFTLSN--TGKILLRTPGNNNLKQTVANVYGRHIAEKMEKFEAKDSD 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+I+G +S P + S + F + +N RY+ +++ N L G
Sbjct: 230 FKITGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQLNTAILDG 270
Query: 298 KRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
SK A P +L ++ L D+ P K V + + I AI + ++K+
Sbjct: 271 YGSKLAARHYPIIVLAIKVDPLLVDVNVHPTKQEVRLSKEKELGRLITSAISNTLVEKVG 330
Query: 356 HDS 358
S
Sbjct: 331 QIS 333
>gi|383114106|ref|ZP_09934871.1| DNA mismatch repair protein mutL [Bacteroides sp. D2]
gi|313694186|gb|EFS31021.1| DNA mismatch repair protein mutL [Bacteroides sp. D2]
Length = 633
Score = 140 bits (352), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 189/401 (47%), Gaps = 49/401 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G + V+ GS+ E ++ G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKLVIAGSQV-------ESQEAISCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
RIALVHP+V+F +SE L S +++ FG + L ++ N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIDVNTTM 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 231 VKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------------------- 268
Query: 298 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
+ Q PA Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 269 MEAYEQLIPAGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 353 KIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS--SPLK 391
A S D D + ++P + S H ++ +P K
Sbjct: 329 FSAIPSIDFDTEDMPDIPAFEEKISSEPPKVHYNTDYNPFK 369
>gi|237719068|ref|ZP_04549549.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_2_4]
gi|229451447|gb|EEO57238.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_2_4]
Length = 633
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 189/401 (47%), Gaps = 49/401 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G + V+ GS+ E ++ G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKLVIAGSQV-------ESQEAISCSKGSNFSIKNLFFNVPARRKFLKANSTE-LSNIL 173
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
RIALVHP+V+F +SE L S +++ FG + L ++ N
Sbjct: 174 AEFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIDVNTTM 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
++ISGY++ P + A QY ++N RY+ HK +
Sbjct: 231 VKISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------------------- 268
Query: 298 KRSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
+ Q PA Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 269 MEAYEQLIPAGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGK 328
Query: 353 KIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS--SPLK 391
A S D D + ++P + S H ++ +P K
Sbjct: 329 FSAIPSIDFDTEDMPDIPAFEEKISSEPPKVHYNTDYNPFK 369
>gi|168492131|ref|ZP_02716274.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC0288-04]
gi|418192878|ref|ZP_12829374.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47439]
gi|183573591|gb|EDT94119.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae
CDC0288-04]
gi|353861025|gb|EHE40964.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47439]
Length = 649
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V +LF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVENLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D +
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>gi|171057810|ref|YP_001790159.1| DNA mismatch repair protein MutL [Leptothrix cholodnii SP-6]
gi|170775255|gb|ACB33394.1| DNA mismatch repair protein MutL [Leptothrix cholodnii SP-6]
Length = 651
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 168/347 (48%), Gaps = 30/347 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVV-DDGSG 62
I LP+ + + + +G V+ VV EL+ N++DAGA ++ + + +V DDG+G
Sbjct: 16 IRELPDELISQIAAGEVIERPGSVVRELLDNALDAGARQITLRLAAGGVRAILVEDDGAG 75
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I D L L +RHATSK+ L D++ +GT GFRGEALA++ V+ L I ++ +
Sbjct: 76 IPADELPLALKRHATSKITSLHDLEQ---VGTMGFRGEALAALGAVAELAITSRTADSAH 132
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
R + + + + VGTTV R+LF+ P RRK++++ ++ H + + V R
Sbjct: 133 AMRIDARSGE-----LAPAARSVGTTVEVRELFFATPARRKFLKTDATELAHCL-EAVRR 186
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
AL P V+F E LL + +P + G E + EV A G L++ G
Sbjct: 187 HALARPAVAFAVWH---EGRLLEQWRAGTPEQRVRDVLGEEFIAASREVTAQAGPLQVYG 243
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+ P + + QY Y+N R+V +L+ H S A L G R
Sbjct: 244 RVGLPEAARARADLQYAYVNGRHVRD----RLVAHGVRS--------AYEDVLHGSRQ-- 289
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P+Y+L + P D+ P K+ V F+D V + R++ +A
Sbjct: 290 ---PSYVLFVDVPPERVDVNVHPTKSEVRFRDSREVHQALRRSVEAA 333
Score = 42.4 bits (98), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 74/196 (37%), Gaps = 16/196 (8%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
+ L Q+ ++ L ++D HAA ERI E L+ + S G + E P
Sbjct: 448 RALAQLGGAYVLAENRRGLVIVDMHAAHERIVYERLKQSLASRRGAAEG-----NENGAP 502
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1286
I Q + A I + L+L V+ L + P L D
Sbjct: 503 GIEAQPMLIPATFAATPTEIATAEVHAATLLQLGLDLTPLSAGVLALRSRPA----ALRD 558
Query: 1287 VDLLEFLQQ-LADTDGSSTTPPSVL------RVLNSKACRGAIMFGDSLLPSECALIVEE 1339
D + + LA+ S+T S L +L + AC GA+ L E ++ +
Sbjct: 559 ADPVALARSVLAELGQSATGEASTLVQRAHDEILATMACHGAVRANRRLTLEEMNALLRD 618
Query: 1340 LKQTSLCFQCAHGRPT 1355
++ T C HGRPT
Sbjct: 619 METTDRADLCNHGRPT 634
>gi|153809079|ref|ZP_01961747.1| hypothetical protein BACCAC_03387 [Bacteroides caccae ATCC 43185]
gi|423216752|ref|ZP_17203248.1| DNA mismatch repair protein mutL [Bacteroides caccae CL03T12C61]
gi|149128412|gb|EDM19631.1| DNA mismatch repair domain protein [Bacteroides caccae ATCC 43185]
gi|392629282|gb|EIY23289.1| DNA mismatch repair protein mutL [Bacteroides caccae CL03T12C61]
Length = 633
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 182/377 (48%), Gaps = 45/377 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A V V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNVHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKLVIAGSKV------ESQEAVSCSKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L S +++ FG + L + N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSE---LFNLPVSPLRQRIMAIFGKKLNQQLLNIEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ISGY++ P + A QY ++N RY+ HK A D +
Sbjct: 232 KISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHK------AVMDAYE------------ 273
Query: 299 RSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q P +Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 ----QLIPVGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELP 370
A S D D + ++P
Sbjct: 330 SAIPSIDFDTEDMPDIP 346
>gi|372488216|ref|YP_005027781.1| DNA mismatch repair protein MutL [Dechlorosoma suillum PS]
gi|359354769|gb|AEV25940.1| DNA mismatch repair protein MutL [Dechlorosoma suillum PS]
Length = 618
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 170/363 (46%), Gaps = 37/363 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP+ + + + +G V+ V++E++ N++DAG+ + + + ++V DDG G
Sbjct: 3 IRLLPDLLISQIAAGEVVERPASVLKEVLENALDAGSQAIQIQLEEGGVKLIRVSDDGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I ++ L L RHATSK+ L D++ + T GFRGEALAS++ V+ L + ++A G +
Sbjct: 63 IPQEELPLALTRHATSKIASLEDLEQ---VATLGFRGEALASVAAVARLTLTSRAAGAGH 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ GS + GT V RDL+YN P RRK+++S + H V R
Sbjct: 120 AWKLAAHGSGE----AEPAALAAGTVVEMRDLYYNTPARRKFLKSEGTEFAHCA-DAVKR 174
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGAL 238
+AL HP V+F S S P A L G I FL E V A L
Sbjct: 175 VALAHPGVAFSLAHN-------GRVSLSLPKADLAGRVGAILGQDFLAECRRVEAAINGL 227
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I GY + P S + QYV++N R+V KLL H +A L G
Sbjct: 228 SIVGYAAQPAWSRPGRDAQYVFVNGRFVRD----KLLAHAL--------REAYQDMLHGS 275
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
R P Y L + + D+ P KT V F+D V F+ A+ A + I+ S
Sbjct: 276 RH-----PGYALFIEIDPAAVDVNVHPAKTEVRFRDGRAVHQFVYHAVHKALSQVISDPS 330
Query: 359 FDV 361
+V
Sbjct: 331 REV 333
>gi|423280572|ref|ZP_17259484.1| DNA mismatch repair protein mutL [Bacteroides fragilis HMW 610]
gi|404583779|gb|EKA88452.1| DNA mismatch repair protein mutL [Bacteroides fragilis HMW 610]
Length = 626
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 187/394 (47%), Gaps = 45/394 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRIIIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L C ++S FG + L V N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSELFNLPACHLRQ---RILSIFGKKLNQQLLSVEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 274 ----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS 387
A S D D + ++P H +S
Sbjct: 330 NAVPSIDFDTEDMPDIPAFEQNLPPEPPKVHFNS 363
>gi|293381578|ref|ZP_06627565.1| DNA mismatch repair protein, C-terminal domain protein
[Lactobacillus crispatus 214-1]
gi|290921848|gb|EFD98863.1| DNA mismatch repair protein, C-terminal domain protein
[Lactobacillus crispatus 214-1]
Length = 641
Score = 139 bits (351), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 179/364 (49%), Gaps = 37/364 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MSKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI+RD + L RHATSK +A+ D + T GFRGEALASIS VS +EI+T A
Sbjct: 59 DNGTGIARDQVDLAFTRHATSK---IANEHDLFKVSTLGFRGEALASISAVSHVEILT-A 114
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G R G G +D GT + +DLF+N P R KY++S +++ +V
Sbjct: 115 TENAIGIRANYSGGNK--KGQEDAAARKGTKITVKDLFFNTPARLKYLRSPRTEIMKTV- 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDG 236
+ R+AL +P VSF + + ++L ++ L I++ +G +++ A D
Sbjct: 172 DIINRLALGYPHVSFT---LSNTGKILLRTPGNNNLKQTIANVYGRHIAEKMEKFEAKDS 228
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+I+G +S P + S + F + +N RY+ +++ N L
Sbjct: 229 DFKITGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQLNTAILD 269
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK A P +L ++ L D+ P K V + + I AI + ++K+
Sbjct: 270 GYGSKLAARHYPIIVLAIKVDPLLVDVNVHPTKQEVRLSKEKELGRLITSAISNTLVEKV 329
Query: 355 AHDS 358
S
Sbjct: 330 EQIS 333
>gi|330831909|ref|YP_004400734.1| DNA mismatch repair protein MutL [Streptococcus suis ST3]
gi|329306132|gb|AEB80548.1| DNA mismatch repair protein MutL [Streptococcus suis ST3]
Length = 645
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 169/356 (47%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G + VV+ELV NS+DAGA+++ + V +++ D+
Sbjct: 1 MSHIIELPEILANQIAAGGGIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GEGIAPDEVALALRRHATSKIKNQSDL---FRIRTLGFRGEALPSIASVSHMIIETATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G KG I+ E + VGT + DLFYN P R KY++S ++ H V
Sbjct: 118 SAHGLHLEAKGGV-----IEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R++L HP+++F ++ EL+ T + + +GI + E+ A D
Sbjct: 173 -DVVNRLSLAHPEMAFALVN--EGRELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ISGY+S P + + + + ++IN RY+ ++ N L+
Sbjct: 230 DFQISGYVSLPELTRANRNYISIFINGRYI-------------------KNFLLNRAILE 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G SK P ++++ L D+ P K V + ++ I AI A
Sbjct: 271 GYGSKLMVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQAL 326
>gi|406579046|ref|ZP_11054334.1| DNA mismatch repair protein, partial [Streptococcus sp. GMD6S]
gi|404453139|gb|EKA00229.1| DNA mismatch repair protein, partial [Streptococcus sp. GMD6S]
Length = 267
Score = 139 bits (351), Expect = 9e-30, Method: Composition-based stats.
Identities = 88/267 (32%), Positives = 144/267 (53%), Gaps = 9/267 (3%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEVEE--VIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLI--SDGKEMTRTAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYV 266
ISG++S P + + + + ++IN RY+
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI 259
>gi|375255212|ref|YP_005014379.1| DNA mismatch repair protein, C-terminal domain-containing protein
[Tannerella forsythia ATCC 43037]
gi|363407157|gb|AEW20843.1| DNA mismatch repair protein, C-terminal domain protein [Tannerella
forsythia ATCC 43037]
Length = 608
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 182/376 (48%), Gaps = 29/376 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+ + N + +G V+ VV+EL+ N+VDA AT++ V + V+V D+G G
Sbjct: 5 IHLLPDHIANQIAAGEVIQRPASVVKELMENAVDAEATEIIVNIKDAGRTLVQVTDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ +D D + T GFRGEALASI+ V+ +E+ T+A
Sbjct: 65 MSETDARMAFERHATSKI---SDAKDLYALRTMGFRGEALASIAAVAQVELRTRARDAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G R + GS + I+ + G ++LFYN PVRRK+++S+ + ++ R
Sbjct: 122 GTRLSICGS--VLESIEADACIQGAIFSIKNLFYNVPVRRKFLKSNETE-FRNIMTEFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+ALVHP ++FK ++E + +S +++ FG L + + ++I G
Sbjct: 179 VALVHPPIAFKLYHNDTE---VMNLPASGLRQRIVNVFGKSFSPKLLPLESATSLVKIEG 235
Query: 243 YISSPYDSISVKAFQ-YVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
+I D++ + +Q Y ++N RY+ HK + H + +
Sbjct: 236 FIGR-TDTVRRRGYQNYFFVNGRYMRHPYFHKAVMHAYEPLIPASEY------------- 281
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 361
P Y + + S D+ P KT + F++ +P+ + A+R A K + S D
Sbjct: 282 ----PDYFIYITLDPSEIDVNIHPTKTEIKFENEQPIWQILSSAVREALGKSNSVPSIDF 337
Query: 362 DMLEDAELPLESSRFQ 377
D ++P + Q
Sbjct: 338 DTEGAIDIPTYNPSMQ 353
>gi|228992456|ref|ZP_04152384.1| DNA mismatch repair protein mutL [Bacillus pseudomycoides DSM
12442]
gi|228767277|gb|EEM15912.1| DNA mismatch repair protein mutL [Bacillus pseudomycoides DSM
12442]
Length = 643
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 188/401 (46%), Gaps = 41/401 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE++T
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELVTSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIMQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L + + I+ L +
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEVESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IRGYVTLPEVTRASRNYISTIVNGRYVRNYVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P +++ L D+ P K V F + +L IE+ ++ A+ K
Sbjct: 280 -----YPIGFVSIEMDPMLVDVNVHPAKLEVRFSKEQELLQLIEKTLQDAFKK------- 327
Query: 360 DVDMLEDAELPL------ESSRFQSHQSSTHLHSSPLKNLA 394
+ ++ DA + ES + Q H T PL N+
Sbjct: 328 -IQLIPDAGVTSKKKEKDESVQEQFHFEHTKPKEVPLPNIV 367
>gi|228470609|ref|ZP_04055466.1| DNA mismatch repair protein MutL [Porphyromonas uenonis 60-3]
gi|228307736|gb|EEK16712.1| DNA mismatch repair protein MutL [Porphyromonas uenonis 60-3]
Length = 646
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 193/394 (48%), Gaps = 40/394 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ +++ELV N++DA AT++ + + ++V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASMLKELVENAIDAHATQIAIELQDAGKELMRVIDDGVG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + +DD + + GFRGEALASI V+ +E+IT+
Sbjct: 65 MSPLDARMAFERHATSKI---SSVDDLFTLRSMGFRGEALASIVAVAQIELITRQADSDI 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
GY+ ++ GS+ + ++GT++ ++LFYN P RR++++ S ++ H + + R
Sbjct: 122 GYKLLINGSEVISSA--PTVAEIGTSITVKNLFYNVPARRRFLKGSETELRH-IYRQFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+P+++F + SE +L+ S ++ G L + +SG
Sbjct: 179 IALVYPEIAFT---LYSEGKLIRNLPKSDLQHRIVDLLGKSYSKQLIPIEYQGPLANVSG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+I+ P D+ A Q+ ++N RY+ H+ + ++ S
Sbjct: 236 FITLPRDAKRRGAQQFFFVNGRYMKHPYFHRAVMNVFEDLVAPGSQ-------------- 281
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR-----SAWMKKIAHD 357
P Y + + S D+ P KT + F D + + + +R ++ M I
Sbjct: 282 ---PNYFIYFQVDPSRIDVNIHPTKTEIKFLDEQAIFKLLMVVLREHLSTTSAMPAI--- 335
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLK 391
+F D L E+P + + QSST L P++
Sbjct: 336 TFSTDQL--IEIPAYDA---TRQSSTALQPPPVQ 364
>gi|21674838|ref|NP_662903.1| DNA mismatch repair protein MutL [Chlorobium tepidum TLS]
gi|25090732|sp|Q8KAX3.1|MUTL_CHLTE RecName: Full=DNA mismatch repair protein MutL
gi|21648059|gb|AAM73245.1| DNA mismatch repair protein MutL [Chlorobium tepidum TLS]
Length = 624
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 178/354 (50%), Gaps = 31/354 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M +I RLP+ V N + +G V+ VV+EL+ NS+DAGA+++ V + V+++D+
Sbjct: 1 MASIARLPDIVANKISAGEVVQRPASVVKELIENSIDAGASRITVIIKDAGRQLVQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ D ++L ER ATSK+ + D+D + T GFRGEALASIS VS E+ T+ G
Sbjct: 61 GCGMESDDVLLSVERFATSKISEVDDLD---ALRTLGFRGEALASISSVSHFELKTRKAG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
N +++ + + + GT++ R+LF+N P RRK+++S+ + H + +
Sbjct: 118 --NSLGTLLRSDGGVIETPQPAQCEPGTSIAVRNLFFNVPARRKFLKSNATEFKH-IHET 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V L +P++ ++ M ++DE L +S L +G L EV + +
Sbjct: 175 VKAFVLSYPEIEWR---MMNDDEELFHFRTSDVRERLSHFYGEGFGESLIEVTEENDYMT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY+ P + K QY +IN R + L+ + ++ G+
Sbjct: 232 IGGYLGKPGMMVRQKYDQYFFINRRLIQN---RMLVQAVQQAY--------------GEL 274
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF----IERAIRSA 349
+ + P LL L SL D+ P K V F+D + + + ++RA+R+A
Sbjct: 275 LEERQSPFALLFLGLDPSLVDVNVHPAKLEVRFEDEKSIRSMVYPVVKRAVRTA 328
>gi|313896663|ref|ZP_07830211.1| DNA mismatch repair family protein [Selenomonas sp. oral taxon 137
str. F0430]
gi|312974580|gb|EFR40047.1| DNA mismatch repair family protein [Selenomonas sp. oral taxon 137
str. F0430]
Length = 621
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 173/356 (48%), Gaps = 32/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+ELV N++DAGAT + + + G +++V D+
Sbjct: 1 MKRIHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGATAIEIEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R RHATSK+ +AD+ +GT GFRGEAL +I+ VS +IT+
Sbjct: 61 GRGMERPDAETAILRHATSKISTVADLQT---VGTLGFRGEALPTIASVSRFSLITRTAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G K I+D DVGTTV DLF+N P R+K+++ + +
Sbjct: 118 ADLGTRVEILGGKTTE--IEDAGCDVGTTVRVEDLFFNTPARKKFLKMD-RTEAGKISDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND--GA 237
V+ +AL P ++F+F++ + L T S + S +G + L ++ D G
Sbjct: 175 VIMLALSRPDIAFRFVN--NNRLTLMTAGDDSLRRAIESIYGGDAAGALIPLDFTDEAGD 232
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ I+GYIS P S +A+Q +N R + I K ++++ + GF
Sbjct: 233 IRITGYISKPSMIRSSRAWQTYIVNGRTIQNRAIAKAIDNV------YRALVPKMGF--- 283
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA 349
P +L + P D+ P KT + F+D ++ V ++ A+R A
Sbjct: 284 --------PLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKTVQGAVRGA 331
Score = 53.5 bits (127), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 50/204 (24%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1215
+ QVD +I + L +IDQHAA ERI + L H +LS + + +
Sbjct: 435 IGQVDLTYIVAQSTRALYIIDQHAAHERILFDRFCALAEGIPSQQMLVHAILSFDAREMQ 494
Query: 1216 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
Y++ EL +G+++ G R + L
Sbjct: 495 YIEENAEL-FSRLGFRM-----------------EPAGDREYR--------------LTE 522
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV--LNSKACRGAIMFGDSLLPSEC 1333
P + ++ + E L L + ++ P+ LR L + ACR AI G+ L +
Sbjct: 523 SPADVPTDEAEDVIREILVSLGELHAAT---PAELRQAGLATMACRAAIKAGEELSFRQM 579
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTV 1357
+++EEL+ T F C HGRPT +
Sbjct: 580 EILLEELRTTPFPFTCPHGRPTIL 603
>gi|311748627|ref|ZP_07722412.1| DNA mismatch repair protein MutL [Algoriphagus sp. PR1]
gi|126577153|gb|EAZ81401.1| DNA mismatch repair protein MutL [Algoriphagus sp. PR1]
Length = 616
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 207/441 (46%), Gaps = 49/441 (11%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
I LP+A+ N + +G V+ ++EL+ NS+D+GATK+ V V ++V+D+G
Sbjct: 4 VIQLLPDAIANQIAAGEVVQRPASALKELLENSIDSGATKIQVVVKDAGKQLIQVIDNGK 63
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+S + ERHATSK+ D+ I TFGFRGEALASI+ V+ +E+ TK
Sbjct: 64 GMSPTDARMSFERHATSKIRSSKDL---FSIRTFGFRGEALASIAAVAQVELKTKPANAD 120
Query: 122 NGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G ++GS+ I ++ GT+V ++LF+N P RR +++S+P ++ H V +
Sbjct: 121 LGTLIQIEGSE-----IKNQEPIAATEGTSVCMKNLFFNVPARRNFLKSNPVEMRHLVDE 175
Query: 179 CVLRIALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
R+AL +P++SF D+E + L S ++ FG L
Sbjct: 176 -FQRVALSYPEISFSLYQQDLEMFNLLPGKLSQR-----IVGLFGKNYQGQLVPCEELTP 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ I GYI P ++ + Q+ ++N+RY+ LNH ++ A G +
Sbjct: 230 HINIKGYIGKPENAKKTRGEQFFFVNNRYIKSS----YLNHAVSN--------AFEGLI- 276
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
+S P Y+L L S D+ P KT + F D V A I A++ A AH
Sbjct: 277 ----QSDQHPFYVLFLEIDPSHIDINVHPTKTEIKFDDERTVYAVIRSAVKQALG---AH 329
Query: 357 D-------SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERIT 409
SFDV+ E+ + E + S +++P K + K E T
Sbjct: 330 HVVPSLDFSFDVNYTENWDKNPEKKEQVDREYSYKSYNTP--EFKKSSASGWEKLFEGNT 387
Query: 410 FQEFQKDPVELAEENTEMEFF 430
Q+ Q+ P + EE E+ F
Sbjct: 388 PQKTQEQPRDENEEEPEVLTF 408
>gi|418416982|ref|ZP_12990180.1| DNA mismatch repair protein mutL [Streptococcus urinalis
FB127-CNA-2]
gi|410873038|gb|EKS20974.1| DNA mismatch repair protein mutL [Streptococcus urinalis
FB127-CNA-2]
Length = 654
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 190/391 (48%), Gaps = 40/391 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV N++DA +T++ + + + + D+
Sbjct: 1 MAKIIELPEVLANQIAAGEVVERPSSVVKELVENAIDAASTQITIEIEESGLKSIIITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + + L RHATSK+ + AD+ I T GFRGEAL S++ +S + I T
Sbjct: 61 GEGMSPEDVALSLRRHATSKIKNQADL---FRIRTLGFRGEALPSVASISEITIKTATRD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G KG + + VGT + +LFYN P R KYM+S ++ H V
Sbjct: 118 SKSGTLLKAKGGEITLQEVTS--TPVGTKISVENLFYNTPARLKYMKSLQAELSHIV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGAL 238
+ R +L HP+++F+ I+ E L S + L IS +G+ + E++A+D L
Sbjct: 175 INRQSLAHPEIAFRLINDGRE---LTRTSGTGNLRQAISGIYGLNTARKMIEISASDLDL 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
EISGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 232 EISGYISLPELTRANRNYITLLINGRYI-------------------KNFLLNRAILDGY 272
Query: 299 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
SK P ++N+ L D+ P K V ++A I +AI+++ ++
Sbjct: 273 GSKLMVGRFPIAVINIDIDPYLADVNVHPTKQEVRISKERELMALISQAIQNSLREQ--- 329
Query: 357 DSFDVDMLEDAELPLESSRF--QSHQSSTHL 385
+ D LE+ L S+R +S Q+S +L
Sbjct: 330 -ALIPDALEN--LAKSSTRIKNKSEQTSFYL 357
>gi|357638916|ref|ZP_09136789.1| DNA mismatch repair protein [Streptococcus urinalis 2285-97]
gi|357587370|gb|EHJ56778.1| DNA mismatch repair protein [Streptococcus urinalis 2285-97]
Length = 656
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 190/391 (48%), Gaps = 40/391 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV N++DA +T++ + + + + D+
Sbjct: 1 MAKIIELPEVLANQIAAGEVVERPSSVVKELVENAIDAASTQITIEIEESGLKSIIITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + + L RHATSK+ + AD+ I T GFRGEAL S++ +S + I T
Sbjct: 61 GEGMSPEDVALSLRRHATSKIKNQADL---FRIRTLGFRGEALPSVASISEITIKTATRD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G KG + + VGT + +LFYN P R KYM+S ++ H V
Sbjct: 118 SKSGTLLKAKGGEITLQEVTS--TPVGTKISVENLFYNTPARLKYMKSLQAELSHIV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGAL 238
+ R +L HP+++F+ I+ E L S + L IS +G+ + E++A+D L
Sbjct: 175 INRQSLAHPEIAFRLINDGRE---LTRTSGTGNLRQAISGIYGLNTARKMIEISASDLDL 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
EISGYIS P + + + + + IN RY+ ++ N L G
Sbjct: 232 EISGYISLPELTRANRNYITLLINGRYI-------------------KNFLLNRAILDGY 272
Query: 299 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
SK P ++N+ L D+ P K V ++A I +AI+++ ++
Sbjct: 273 GSKLMVGRFPIAVINIDIDPYLADVNVHPTKQEVRISKERELMALISQAIQNSLREQ--- 329
Query: 357 DSFDVDMLEDAELPLESSRF--QSHQSSTHL 385
+ D LE+ L S+R +S Q+S +L
Sbjct: 330 -ALIPDALEN--LAKSSTRIKNKSEQTSFYL 357
>gi|222153878|ref|YP_002563055.1| DNA mismatch repair protein [Streptococcus uberis 0140J]
gi|254766178|sp|B9DW70.1|MUTL_STRU0 RecName: Full=DNA mismatch repair protein MutL
gi|222114691|emb|CAR43777.1| DNA mismatch repair protein MutL [Streptococcus uberis 0140J]
Length = 660
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 195/422 (46%), Gaps = 55/422 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA + ++ + + +K+ D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPASVVKELVENAIDANSRQITIEIEESGLKSIKITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + L L RHATSK+ + +D+ I T GFRGEAL SI+ +S L I T
Sbjct: 61 GEGMSEENLPLSILRHATSKIKNQSDL---FRIRTLGFRGEALPSIASISELRIETSTAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
P G V KG + ER++ VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 SPYGSLLVAKGGQI-------ERQEVISTPVGTKITVENLFYNTPARLKYMKSLQSELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+VSF I + + S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLGHPEVSFTLI---CDGREMTKTSGTGDLKQAIAGIYGLNTAKKMIEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
D E+SGY+S P + + + + + IN RY+ ++ N
Sbjct: 227 ADLDFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRA 267
Query: 294 FLKGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
L G SK P +++++ L D+ P K V + ++A I AI +
Sbjct: 268 ILDGYGSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISTAIAESLK 327
Query: 352 KKIAHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKECER 407
+ D++ DA L S +S Q+ L SS L Q++ + KE ++
Sbjct: 328 SQ--------DLIPDALENLAKSTVRSSTKYEQTKLPLQSSKLY-FDPQKNDFYIKEPQK 378
Query: 408 IT 409
T
Sbjct: 379 TT 380
>gi|310821741|ref|YP_003954099.1| DNA mismatch repair protein MutL [Stigmatella aurantiaca DW4/3-1]
gi|309394813|gb|ADO72272.1| DNA mismatch repair protein MutL [Stigmatella aurantiaca DW4/3-1]
Length = 602
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 174/366 (47%), Gaps = 30/366 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I RL + + N + +G V+ VV+ELV NS+DAGA V V + G + V DD
Sbjct: 1 MARIARLRDDLINKIAAGEVVERPASVVKELVENSLDAGAHTVQVALEGGGLQRIVVSDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R+ VL ERHATSK L ++DD + + GFRGEAL +I+ VS + T
Sbjct: 61 GHGMGREDAVLCLERHATSK---LRELDDLENLVSKGFRGEALPAIAAVSRFTLHTAEPE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R ++G L+ +++ VGT + DLFYN P R K+M+ ++ H V++
Sbjct: 118 AEVGTRVTVEGGAGLH--VEEAPPRVGTVMTVEDLFYNTPARLKFMRRGETELKH-VEEA 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V+RIAL HP+VSF ++ P + ++ G + L V L
Sbjct: 175 VIRIALAHPEVSF-LVEHGGLPLFTSPACPEDPTERIAAALGTDVHPHLFSVEERRLGLS 233
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G+I+SP ++ Y ++N RYV D G+ +
Sbjct: 234 ITGHIASPEYTLPTARGIYTFVNHRYV---------------RDRGLIGAIQRGYQEYLP 278
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-WMKKI 354
S Q +++ PH++ D+ P K V F D ++ VLA I R +R+A W+
Sbjct: 279 SGRQPLVVLFIDVE-PHAV-DVNVHPQKMEVRFADSRGVYDAVLAAIVRTLRAAPWLGPT 336
Query: 355 AHDSFD 360
+ D
Sbjct: 337 PPEGGD 342
Score = 42.7 bits (99), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 73/187 (39%), Gaps = 27/187 (14%)
Query: 1182 GGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIK 1241
GGTL V+D HAA ER+RL + H++L EGK+ + LP + L E +
Sbjct: 434 GGTLVVLDPHAALERVRLMDF-HRLLE-EGKTPPPSLFGTTVELPVPAARALMGGRESLA 491
Query: 1242 DWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG 1301
G ++ G SF L AVP L D L+ L+
Sbjct: 492 LLG--IDVEPFGGTSF--------------ALKAVPP----GLEGADPRALLEALSHALP 531
Query: 1302 SSTTPPSVL---RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT-- 1356
+ TPP + L AC A D L ++ ++ EL C HG
Sbjct: 532 PAGTPPDAVGLAEALRVMACHAAQTASDKLTDAQLRALLGELDAADFHPTCRHGTVVVLE 591
Query: 1357 VPLVNLE 1363
+PL+ LE
Sbjct: 592 MPLLELE 598
>gi|262383881|ref|ZP_06077017.1| DNA mismatch repair protein MutL [Bacteroides sp. 2_1_33B]
gi|262294779|gb|EEY82711.1| DNA mismatch repair protein MutL [Bacteroides sp. 2_1_33B]
Length = 615
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 179/369 (48%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+ + N + +G V+ VV+ELV N+VDAGA+ + V + ++V+DDG G
Sbjct: 5 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + +D + T GFRGEALASI+ V+ +E+ T+A G
Sbjct: 65 MSETDARMAFERHATSKI---STAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGTEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + GS I+ E + G+ ++LF+N P RRK+++S+ + + + + R
Sbjct: 122 GTCLSIAGSNL--ESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINE-FER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+P+V ++E + S +I+ +G L ++A + ISG
Sbjct: 179 IALVNPQVGMSLYHNDAE---IFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A Q+ ++N RY+ HK + +A +
Sbjct: 236 FVGRPDSAKKRGALQFFFVNGRYMKHPYFHKAI------------MQAYEQLIPAGD--- 280
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y + S D+ P KT + F++ +P+ + A R A K A + D D
Sbjct: 281 --MPNYFVYFTLDPSSIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFD 338
Query: 363 MLEDAELPL 371
+ + ++P+
Sbjct: 339 VEDAIDIPV 347
>gi|322371529|ref|ZP_08046075.1| DNA mismatch repair protein MutL [Haladaptatus paucihalophilus
DX253]
gi|320548820|gb|EFW90488.1| DNA mismatch repair protein MutL [Haladaptatus paucihalophilus
DX253]
Length = 734
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 166/349 (47%), Gaps = 26/349 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I L E + +G V+ VV+ELV NS+DA A+++ V V G + V DDG G
Sbjct: 8 IRALSETTIQRIAAGEVVERPASVVKELVENSLDADASRISVRVDGGGTERIAVTDDGIG 67
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+SR+ + + E H TSK+ + D++ +G+ T GFRGEAL +I VS +I TK G +
Sbjct: 68 MSREDVQIAVEEHTTSKIRDIDDLE--SGVATLGFRGEALYTIGAVSRTKIRTKPRGGES 125
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + G G+ GTTV DLF+N P RRKY+++ + H V + V +
Sbjct: 126 GTELRLVGGDV--EGVGPAGCPEGTTVEVEDLFFNTPARRKYLKTDSTEFAH-VNRVVTQ 182
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
AL +P V+F E+ T + + ++S +G E + + V+ D A++ SG
Sbjct: 183 YALANPDVAFSL--EHDGREVFSTTGRGNLQSTILSVYGREVATAMIAVDGGD-AVDASG 239
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
Y+S P + S + + Y+N RYV + + + D + A + +
Sbjct: 240 YVSHPETTRSTREYVATYVNGRYVRSSVVREAI------LDAYGNQLAPDRY-------- 285
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
P +L L P D+ P K V F D V + A++ A +
Sbjct: 286 ---PFAVLFLDVPADSVDVNVHPRKMEVRFGDEARVKTAVRDAVQDALL 331
Score = 47.4 bits (111), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 20/193 (10%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
++L Q+ ++ L +IDQHAADER+ E L + V E EL
Sbjct: 536 RILGQLHDTYVVAETDDGLVLIDQHAADERVNYERLCRQFAGDTTTQVLASSVELELTAA 595
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1286
E L ++ E + G+ + + R + V T VP +F LS
Sbjct: 596 EAA--LFDDYREALARLGFHAAL-------------VDDRTVEVTT---VPAVFEKTLSP 637
Query: 1287 VDLLEFLQQL--ADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1344
L + L + ++ G+++ +++ AC +I SL + ++ L +
Sbjct: 638 DLLRDVLSEFISVESGGANSAEAVADELISDLACYPSITGNTSLREGDVVSLLAALDECE 697
Query: 1345 LCFQCAHGRPTTV 1357
+ C HGRP +
Sbjct: 698 NPYACPHGRPVVI 710
>gi|46445773|ref|YP_007138.1| methyl-directed mismatch repair (MMR) protein, mutL [Candidatus
Protochlamydia amoebophila UWE25]
gi|46399414|emb|CAF22863.1| putative methyl-directed mismatch repair (MMR) protein, mutL
[Candidatus Protochlamydia amoebophila UWE25]
Length = 652
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 183/367 (49%), Gaps = 32/367 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ L E N + +G V+ + VV+ELV NS+DAGAT++ V + G +++ D+G G
Sbjct: 7 IHVLTEQTINQIAAGEVIENPASVVKELVENSMDAGATEICVEIQGGGRQLIRISDNGCG 66
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S D +L ERHATSK + ++DD I T GFRGEA+ SI+ +S ++T +
Sbjct: 67 MSEDDALLCLERHATSK---IKNVDDIENILTMGFRGEAIPSIASISKFSLLTTPQSGVS 123
Query: 123 GYRKVMKGSKCLYLG--IDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
K+M+GS + G I K GTT+ + LF+N PVRRK+ Q SP +
Sbjct: 124 SIDKLMQGSLTIVEGGRIQSHGKATRSPGTTIEVKSLFFNVPVRRKF-QRSPNYDTQEIV 182
Query: 178 KCVLRIALVHPKVSFKFI-DMESEDEL-LCTCSSSSPLALL--ISSFGIEDFSF-LDEVN 232
K + ++L +P ++F+ I D +S ++ L + + LL I + ++FS L +
Sbjct: 183 KILTNLSLAYPNIAFELISDQKSILKMPLISIDINHQQQLLKKIETLLGKEFSHSLCPLT 242
Query: 233 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 292
+ EI GYI P + QY++IN R V I + +
Sbjct: 243 FSSPPYEIEGYIGLPSIHKPNRTSQYLFINRRAVYSPLI-------------GVAIREGY 289
Query: 293 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
G + G + P ++L+LR P SL+D+ P K V + + + + A++ A +
Sbjct: 290 GTMLG----TNRYPVFILHLRLPGSLFDVNVHPQKKEVRLRQEQKLKETLINAVQKALRQ 345
Query: 353 KIAHDSF 359
+ H +F
Sbjct: 346 ENPHQAF 352
>gi|355628055|ref|ZP_09049570.1| hypothetical protein HMPREF1020_03649 [Clostridium sp. 7_3_54FAA]
gi|354819948|gb|EHF04380.1| hypothetical protein HMPREF1020_03649 [Clostridium sp. 7_3_54FAA]
Length = 684
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 178/371 (47%), Gaps = 34/371 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ VV+EL+ N+VDA +T V V + ++V D+
Sbjct: 1 MANIQVLDQNTINQIAAGEVIERPASVVKELLENAVDAKSTAVTVEIRDGGLSMIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI ++ + L RHATSK+ ++D + + GFRGEAL+SI+ V+ +E+ITK G
Sbjct: 61 GCGIPKEEIPLAFLRHATSKI---RTVEDLFTVASLGFRGEALSSIASVAQVELITKTTG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G R ++G + + L ++ GTT ++R+LFYN P RRK++++ + H V
Sbjct: 118 SMSGSRYQIEGGEEIAL--EEVGAPEGTTFIARNLFYNTPARRKFLKTPMTEGAH-VADL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V +IAL HP++S + I ++ L T + + ++ + FG E + L V + ++
Sbjct: 175 VEKIALSHPEISIRLI--QNGQSKLHTSGNHNLKDIIYTIFGREIAANLIAVQSGAEPVK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ G+I P + + ++ +IN RY+ I+K + F +
Sbjct: 233 VEGFIGKPLIARGNRNYENYFINGRYIKSSLINKAIEDAYKPFMMQHKY----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P +L D+ P K + F+D E V + I A +K
Sbjct: 282 ------PFTMLQFTIEPEFLDVNVHPAKMELRFRDGEMVYRMVYHTISMALSQK------ 329
Query: 360 DVDMLEDAELP 370
+++ ELP
Sbjct: 330 --ELIPQVELP 338
Score = 43.9 bits (102), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 38/189 (20%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKS-------VAYLDAEQELVLPEIGYQLLQNFA 1237
L +IDQHAA E++ E+ + E S + L +EL +L+ +
Sbjct: 515 LYIIDQHAAHEKVLYEKTMASLKKREYTSQMINPPIILTLSGNEEL--------MLKKYM 566
Query: 1238 EQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLA 1297
E G+ I G + + + AVP NL + E L ++
Sbjct: 567 EHFTAVGF--EIEHFGGKEY--------------AVRAVPA----NLFSIAKKELLMEMI 606
Query: 1298 D--TDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1354
D TDG P ++ + S +C+ A+ ++ +E +++EL + + C HGRP
Sbjct: 607 DGLTDGVDQGTPDIINEKIASMSCKAAVKGNHAMSAAEADSLIDELLELENPYACPHGRP 666
Query: 1355 TTVPLVNLE 1363
T + + E
Sbjct: 667 TIITMSKYE 675
>gi|260102902|ref|ZP_05753139.1| DNA mismatch repair protein HexB [Lactobacillus helveticus DSM
20075]
gi|260083291|gb|EEW67411.1| DNA mismatch repair protein HexB [Lactobacillus helveticus DSM
20075]
Length = 636
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 174/364 (47%), Gaps = 37/364 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ F+ G+ V+
Sbjct: 1 MAKIHELSENLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFIDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI+RD + L RHATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRHATSKISNEHDL---FKVSTLGFRGEALASISAVSHVEIVTAT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
GSK G +D GT + RDLF+N P R KY++ SP+ + +
Sbjct: 116 ENAIGIKADFSGGSKK---GQEDAASQKGTKITVRDLFFNTPARLKYLR-SPRTEIMKIV 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDG 236
+ R++L +P VSF + + ++L + + L +++ +G ++ A D
Sbjct: 172 DIINRLSLGYPHVSFT---LSNTGKVLFRTTGNGNLKQTVANVYGRHIAEKMESFEAKDS 228
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+I+G +S P + S + F + +N RY+ +++ NN +
Sbjct: 229 DFKITGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQLNNAIMD 269
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK A P ++ + L D+ P K V + + I AI A + K
Sbjct: 270 GYGSKLAARHYPIVVIAIHVDPMLVDVNVHPTKQEVRLSKEKELSRLITGAISDALLDKT 329
Query: 355 AHDS 358
S
Sbjct: 330 EQSS 333
>gi|255014822|ref|ZP_05286948.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_1_7]
gi|410102769|ref|ZP_11297694.1| DNA mismatch repair protein mutL [Parabacteroides sp. D25]
gi|409237896|gb|EKN30691.1| DNA mismatch repair protein mutL [Parabacteroides sp. D25]
Length = 615
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 179/369 (48%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+ + N + +G V+ VV+ELV N+VDAGA+ + V + ++V+DDG G
Sbjct: 5 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + +D + T GFRGEALASI+ V+ +E+ T+A G
Sbjct: 65 MSETDARMAFERHATSKI---STAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGTEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + GS I+ E + G+ ++LF+N P RRK+++S+ + + + + R
Sbjct: 122 GTCLSIAGSNL--ESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINE-FER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+P+V ++E + S +I+ +G L ++A + ISG
Sbjct: 179 IALVNPQVGMSLYHNDAE---IFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A Q+ ++N RY+ HK + +A +
Sbjct: 236 FVGRPDSAKKRGALQFFFVNGRYMKHPYFHKAI------------MQAYEQLIPAGD--- 280
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y + S D+ P KT + F++ +P+ + A R A K A + D D
Sbjct: 281 --MPNYFVYFTLDPSSIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFD 338
Query: 363 MLEDAELPL 371
+ + ++P+
Sbjct: 339 VEDAIDIPV 347
>gi|422021058|ref|ZP_16367572.1| DNA mismatch repair protein [Providencia sneebia DSM 19967]
gi|414099963|gb|EKT61596.1| DNA mismatch repair protein [Providencia sneebia DSM 19967]
Length = 633
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 176/373 (47%), Gaps = 53/373 (14%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDDGS 61
I L + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G
Sbjct: 2 AIQILSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGEKLIRIRDNGC 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI +D L+L RHATSK +A +DD I + GFRGEALASIS VS L + +K +
Sbjct: 62 GIGKDELILALARHATSK---IATLDDLEAIMSMGFRGEALASISSVSRLTLTSKPAEQS 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ +G + + + + GTTV DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQSYAEG-RDMQVNVKPAAHPNGTTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEIVR 176
Query: 182 RIALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 227
RIAL P V+ K + +++ E L C +S L S+
Sbjct: 177 RIALSRPDVAINLSHNGKLVKQYRAAHDEVQQERRLASICGTSFMQGALAISW------- 229
Query: 228 LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L I G++ +P S SV QY Y+N R + +L+NH
Sbjct: 230 ------QHGDLGIKGWVVAPSHS-SVIDIQYCYVNGRMMRD----RLINHAIR------- 271
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
+A G L + PAY+L L PH + D+ P K V F V FI + +
Sbjct: 272 -QAYEGHLTDNQQ-----PAYVLYLSIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQGV 324
Query: 347 RSAWMKKIAHDSF 359
R+A + I+ D
Sbjct: 325 RTALLNAISPDEL 337
>gi|313149555|ref|ZP_07811748.1| DNA mismatch repair protein mutL [Bacteroides fragilis 3_1_12]
gi|313138322|gb|EFR55682.1| DNA mismatch repair protein mutL [Bacteroides fragilis 3_1_12]
Length = 626
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 187/394 (47%), Gaps = 45/394 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRIIIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L C ++S FG + L V N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSELFNLPACHLRQ---RILSIFGKKLNQQLLSVEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 274 ----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS 387
A S D D + ++P H +S
Sbjct: 330 NAVPSIDFDTEDMPDIPAFEQNLPPAPPKVHFNS 363
>gi|323691986|ref|ZP_08106234.1| DNA mismatch repair protein MutL [Clostridium symbiosum WAL-14673]
gi|323503909|gb|EGB19723.1| DNA mismatch repair protein MutL [Clostridium symbiosum WAL-14673]
Length = 684
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 178/371 (47%), Gaps = 34/371 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ VV+EL+ N+VDA +T V V + ++V D+
Sbjct: 1 MANIQVLDQNTINQIAAGEVIERPASVVKELLENAVDAKSTAVTVEIRDGGLSMIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI ++ + L RHATSK+ ++D + + GFRGEAL+SI+ V+ +E+ITK G
Sbjct: 61 GCGIPKEEIPLAFLRHATSKI---RTVEDLFTVASLGFRGEALSSIASVAQVELITKTTG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G R ++G + + L ++ GTT ++R+LFYN P RRK++++ + H V
Sbjct: 118 SMSGSRYQIEGGEEIAL--EEVGAPEGTTFIARNLFYNTPARRKFLKTPMTEGAH-VADL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V +IAL HP++S + I ++ L T + + ++ + FG E + L V + ++
Sbjct: 175 VEKIALSHPEISIRLI--QNGQSKLHTSGNHNLKDIIYTIFGREIAANLIAVQSGADPVK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ G+I P + + ++ +IN RY+ I+K + F +
Sbjct: 233 VEGFIGKPLIARGNRNYENYFINGRYIKSSLINKAIEDAYKPFMMQHKY----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P +L D+ P K + F+D E V + I A +K
Sbjct: 282 ------PFTMLQFTIEPEFLDVNVHPAKMELRFRDGEMVYRMVYHTISMALSQK------ 329
Query: 360 DVDMLEDAELP 370
+++ ELP
Sbjct: 330 --ELIPQVELP 338
Score = 43.9 bits (102), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 38/189 (20%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKS-------VAYLDAEQELVLPEIGYQLLQNFA 1237
L +IDQHAA E++ E+ + E S + L +EL +L+ +
Sbjct: 515 LYIIDQHAAHEKVLYEKTMASLKKREYTSQMINPPIILTLSGNEEL--------MLKKYM 566
Query: 1238 EQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLA 1297
E G+ I G + + + AVP NL + E L ++
Sbjct: 567 EHFTAVGF--EIEHFGGKEY--------------AVRAVPA----NLFSIAKKELLMEMI 606
Query: 1298 D--TDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1354
D TDG P ++ + S +C+ A+ ++ +E +++EL + + C HGRP
Sbjct: 607 DGLTDGVDQGTPDIINEKIASMSCKAAVKGNHAMSAAEADSLIDELLELENPYACPHGRP 666
Query: 1355 TTVPLVNLE 1363
T + + E
Sbjct: 667 TIITMSKYE 675
>gi|300715038|ref|YP_003739841.1| DNA mismatch repair protein [Erwinia billingiae Eb661]
gi|299060874|emb|CAX57981.1| DNA mismatch repair protein [Erwinia billingiae Eb661]
Length = 627
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 174/381 (45%), Gaps = 52/381 (13%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L + RHATSK + +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELSMALARHATSK---ITTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTEAQAE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + + R
Sbjct: 120 AWQAYAEG-RDMAVTLKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEIIRR 177
Query: 183 IALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+F + E L C + A L + IE
Sbjct: 178 IALARFDVAFSLTHNGKLMRQYRGVADHSQRERRLGAICGT----AFLSHALAIE----- 228
Query: 229 DEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSW 288
G L + G+++ P S ++ QY Y+N R + +L+NH
Sbjct: 229 ----WQHGDLSLKGWVADPVGSRAITDLQYCYVNGRMMRD----RLINH----------- 269
Query: 289 KANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
A + K S PAY+L L PH + D+ P K V F V FI + +
Sbjct: 270 -AIRQAYQDKLGDSHQ-PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVV 326
Query: 348 SAWMKKIAHDSFDVDMLEDAE 368
S + A DV+ AE
Sbjct: 327 SVLQEAGAETLPDVEPAAPAE 347
>gi|418183969|ref|ZP_12820518.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47283]
gi|421216577|ref|ZP_15673480.1| DNA mismatch repair protein mutL domain protein [Streptococcus
pneumoniae 2070335]
gi|353852438|gb|EHE32426.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA47283]
gi|395585615|gb|EJG45994.1| DNA mismatch repair protein mutL domain protein [Streptococcus
pneumoniae 2070335]
Length = 313
Score = 139 bits (350), Expect = 1e-29, Method: Composition-based stats.
Identities = 89/267 (33%), Positives = 144/267 (53%), Gaps = 9/267 (3%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEVEE--VIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLI--SDGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYV 266
ISG++S P + + + + ++IN RY+
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI 259
>gi|374338958|ref|YP_005095678.1| DNA mismatch repair protein MutL [Streptococcus macedonicus ACA-DC
198]
gi|372285078|emb|CCF03412.1| DNA mismatch repair protein MutL [Streptococcus macedonicus ACA-DC
198]
Length = 647
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 172/355 (48%), Gaps = 42/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI++D + L RHATSK+ + AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 61 GEGITQDDVALSLHRHATSKIKNQADL---FRIRTLGFRGEAIPSIASISHFTVKTATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G V KG + E+++ VGT ++ +LFYN P R KYM+S ++ H
Sbjct: 118 ENYGTLLVAKGGEI-------EKQEPISTPVGTKIMVENLFYNTPARLKYMKSLQSELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+V+F I+ + + T S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEVAFSLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
D E+SGYI P + + + + + IN RY+ ++ N
Sbjct: 227 ADLDFEVSGYIGLPELTRANRNYITILINGRYI-------------------KNFLLNRA 267
Query: 294 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V + +++ I AI
Sbjct: 268 ILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMSLISSAI 322
>gi|323486938|ref|ZP_08092253.1| DNA mismatch repair protein mutL [Clostridium symbiosum WAL-14163]
gi|323399710|gb|EGA92093.1| DNA mismatch repair protein mutL [Clostridium symbiosum WAL-14163]
Length = 684
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 178/371 (47%), Gaps = 34/371 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ VV+EL+ N+VDA +T V V + ++V D+
Sbjct: 1 MANIQVLDQNTINQIAAGEVIERPASVVKELLENAVDAKSTAVTVEIRDGGLSMIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI ++ + L RHATSK+ ++D + + GFRGEAL+SI+ V+ +E+ITK G
Sbjct: 61 GCGIPKEEIPLAFLRHATSKI---RTVEDLFTVASLGFRGEALSSIASVAQVELITKTTG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G R ++G + + L ++ GTT ++R+LFYN P RRK++++ + H V
Sbjct: 118 SMSGSRYQIEGGEEIAL--EEVGAPEGTTFIARNLFYNTPARRKFLKTPMTEGAH-VADL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V +IAL HP++S + I ++ L T + + ++ + FG E + L V + ++
Sbjct: 175 VEKIALSHPEISIRLI--QNGQSKLHTSGNHNLKDIIYTIFGREIAANLIAVQSGAEPVK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ G+I P + + ++ +IN RY+ I+K + F +
Sbjct: 233 VEGFIGKPLIARGNRNYENYFINGRYIKSSLINKAIEDAYKPFMMQHKY----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P +L D+ P K + F+D E V + I A +K
Sbjct: 282 ------PFTMLQFTIEPEFLDVNVHPAKMELRFRDGEMVYRMVYHTISMALSQK------ 329
Query: 360 DVDMLEDAELP 370
+++ ELP
Sbjct: 330 --ELIPQVELP 338
Score = 43.9 bits (102), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 38/189 (20%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKS-------VAYLDAEQELVLPEIGYQLLQNFA 1237
L +IDQHAA E++ E+ + E S + L +EL +L+ +
Sbjct: 515 LYIIDQHAAHEKVLYEKTMASLKKREYTSQMINPPIILTLSGNEEL--------MLKKYM 566
Query: 1238 EQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLA 1297
E G+ I G + + + AVP NL + E L ++
Sbjct: 567 EHFTAVGF--EIEHFGGKEY--------------AVRAVPA----NLFSIAKKELLMEMI 606
Query: 1298 D--TDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1354
D TDG P ++ + S +C+ A+ ++ +E +++EL + + C HGRP
Sbjct: 607 DGLTDGVDQGTPDIINEKIASMSCKAAVKGNHAMSAAEADSLIDELLELENPYACPHGRP 666
Query: 1355 TTVPLVNLE 1363
T + + E
Sbjct: 667 TIITMSKYE 675
>gi|163787897|ref|ZP_02182343.1| DNA mismatch repair protein [Flavobacteriales bacterium ALC-1]
gi|159876217|gb|EDP70275.1| DNA mismatch repair protein [Flavobacteriales bacterium ALC-1]
Length = 616
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 173/349 (49%), Gaps = 35/349 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGAT++ + V+V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATEIKLIIKDAGKTLVQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK + +D + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSVTDARLSFERHATSK---IKSAEDLFQLNTKGFRGEALASIAAIAHVELKTKRPEDEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G ++GS + + V GT+V ++LF+N P RR +++S ++ H +
Sbjct: 122 GTAIEIEGST-----VKSQEVSVTPSGTSVAVKNLFFNIPARRNFLKSDTVELRH-ITDE 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
R+AL HP ++F F S+ L +S + ++ FG + L V L+
Sbjct: 176 FHRVALAHPNIAFVFYHNGSD---LFNVTSENYRQRVVHIFGTKTNEKLVPVEEETEVLK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGK 298
ISG++ P S K+ Q+ ++N R++ K P LNH + A+F+ G LK
Sbjct: 233 ISGFVGKPEFSKKTKSEQFFFVNQRFI-KSP---YLNHAINAAFE---------GLLKDG 279
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P+Y LNL D+ P KT + F D + A + A++
Sbjct: 280 YH-----PSYFLNLTVDPKTIDINIHPTKTEIKFDDEHTLYAILRSAVK 323
>gi|302670849|ref|YP_003830809.1| DNA mismatch repair protein MutL [Butyrivibrio proteoclasticus
B316]
gi|302395322|gb|ADL34227.1| DNA mismatch repair protein MutL [Butyrivibrio proteoclasticus
B316]
Length = 666
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 175/350 (50%), Gaps = 26/350 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M IN L + + + +G V+ VV+ELV N++D+GAT V V + G ++V D+
Sbjct: 1 MAFINELDKNTIDQIAAGEVVERPASVVKELVENAIDSGATAVTVEIKGGGIDMIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI + + +RHATSKL ++DD I + GFRGEAL+SIS V+ ++ ITK
Sbjct: 61 GSGIEKSQIRKAFKRHATSKL---KNIDDLFSIHSLGFRGEALSSISSVAQVDCITKTKD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G + G+D+ GTT + R+LFYN P R+K+++ +P+ +
Sbjct: 118 DLTGTRYSINGGE--EAGMDEIGAPDGTTFIIRNLFYNTPARKKFLK-TPQTEGSYIGDV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ +AL +P +SF +I+ ++D+ T + L+ +G + + ++A+D +
Sbjct: 175 MEHLALDNPTISFHYIN--NKDDKFSTSGNGDLKELIYRIYGRDVSVSVRPISASDHGIT 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ GY+ P + S + F+ ++N RYV I K L + +
Sbjct: 233 VEGYLGEPTLNRSNRNFEIFFVNGRYVKDKIISKALEEGYKQYLMMHKF----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P +L++R S+ D+ P K V F + + FI+ ++ +
Sbjct: 282 ------PFAILHIRMDPSMVDVNVHPAKLEVRFNNQALLYDFIKTSVENV 325
Score = 48.9 bits (115), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 101/254 (39%), Gaps = 35/254 (13%)
Query: 1118 NGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFI 1177
+G N+ S I QD I+ + + L F + K +++ ++L Q+ +
Sbjct: 430 DGSKAEKNDRPSSIIKQQDAIV-VEKKPVQLN--LFDEKVLTKENVKEYEILGQIFGTYW 486
Query: 1178 PVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS-------VAYLDAEQELVLPEIGY 1230
+ + ++DQHAA E++ E + + SG+ S + L A +E + E
Sbjct: 487 IIGFKDKMFMVDQHAAHEKVNYERMMKRYKSGDILSQMVNPPVIVTLSAAEEEIFLE--- 543
Query: 1231 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLSDVDL 1289
+ + + G+ NI G + + A+P +FG +
Sbjct: 544 -----YRQYFEKLGF--NIENFGGHEY--------------AMRAIPVDLFGCDNEKEMF 582
Query: 1290 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1349
E L +L+ TP + + S AC+ ++ + E +++EL + + C
Sbjct: 583 QEILDELSHETSLDRTPDVINYKIASMACKASVKGNTRMTTQEMEALLDELLKLDNPYNC 642
Query: 1350 AHGRPTTVPLVNLE 1363
HGRPT + + E
Sbjct: 643 PHGRPTIISMSKYE 656
>gi|265767840|ref|ZP_06095372.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_1_16]
gi|336412089|ref|ZP_08592547.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_1_56FAA]
gi|375360130|ref|YP_005112902.1| putative DNA mismatch repair protein [Bacteroides fragilis 638R]
gi|383119907|ref|ZP_09940644.1| DNA mismatch repair protein mutL [Bacteroides sp. 3_2_5]
gi|423252202|ref|ZP_17233204.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL03T00C08]
gi|423252522|ref|ZP_17233453.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL03T12C07]
gi|423283062|ref|ZP_17261947.1| DNA mismatch repair protein mutL [Bacteroides fragilis HMW 615]
gi|251944073|gb|EES84592.1| DNA mismatch repair protein mutL [Bacteroides sp. 3_2_5]
gi|263252512|gb|EEZ24040.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_1_16]
gi|301164811|emb|CBW24371.1| putative DNA mismatch repair protein [Bacteroides fragilis 638R]
gi|335939261|gb|EGN01138.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_1_56FAA]
gi|392647814|gb|EIY41511.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL03T00C08]
gi|392660598|gb|EIY54207.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL03T12C07]
gi|404581336|gb|EKA86035.1| DNA mismatch repair protein mutL [Bacteroides fragilis HMW 615]
Length = 625
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 184/377 (48%), Gaps = 45/377 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKIIIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L C ++S FG + L V N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSELFNLPACHLRQ---RILSVFGKKLNQQLLSVEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + +I+ + K
Sbjct: 274 ----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASIKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELP 370
A S D D + ++P
Sbjct: 330 NAVPSIDFDTEDMPDIP 346
>gi|295088070|emb|CBK69593.1| DNA mismatch repair protein MutL [Bacteroides xylanisolvens XB1A]
Length = 633
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 186/394 (47%), Gaps = 45/394 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIRQAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + V+ GS+ + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKLVIAGSQV------ESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L S +++ FG + L + N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ISGY++ P + A QY ++N RY+ HK +
Sbjct: 232 KISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV----------------------M 269
Query: 299 RSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ Q P +Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 270 EAYEQLIPTGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS 387
A S D D + ++P + S H ++
Sbjct: 330 SAIPSIDFDTEDMPDIPAFEEKMSSEPPKIHYNT 363
>gi|225567943|ref|ZP_03776968.1| hypothetical protein CLOHYLEM_04016 [Clostridium hylemonae DSM
15053]
gi|225163231|gb|EEG75850.1| hypothetical protein CLOHYLEM_04016 [Clostridium hylemonae DSM
15053]
Length = 695
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 167/347 (48%), Gaps = 26/347 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + + + +G V+ VV+EL N++DAGAT + V + ++++ D+
Sbjct: 1 MNKIQVLDQVTIDKIAAGEVIERPASVVKELAENAIDAGATSITVEIKEGGISFIRIADN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI R+ + RH+TSK+ + D+ IG+ GFRGEAL+SI+ VS +E++TK
Sbjct: 61 GCGIGREDVPSAFLRHSTSKIRSVEDL---VHIGSLGFRGEALSSIAAVSQVELVTKTKA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + G K L +D GTT + R LFYN P RRK++++ + H V +
Sbjct: 118 DTFGTSYRIAGGKEEAL--EDTGAPDGTTFLIRQLFYNTPARRKFLKTPMTEASH-VGEL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP++SF+FI+ + + T + S ++ +G E + L VN ++
Sbjct: 175 VTRLALSHPEISFQFIN--NGQSKVHTSGNGSLKDVIYHVYGREIAANLLAVNYERTGMK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G++ P S + F+ +IN RYV I K + F +
Sbjct: 233 ITGFLGKPLISRGNRNFENYFINGRYVKSNMIAKAIEDAYKDFTMQHKY----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
P +L++ D+ P K + F + + V + A+
Sbjct: 282 ------PFVVLHMEIDGEHIDVNVHPTKMELRFNNQQDVYNSVYEAV 322
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 19/198 (9%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
K++ QV + V +L +IDQHAA ER+ E + + E S Y+ L L
Sbjct: 507 KLVGQVFDTYWIVEFHDSLYIIDQHAAHERVLYERTLKNMKTREFTS-QYISPPIILDLT 565
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLS 1285
+LL + EQ G+ I G S+ + AVP +F +
Sbjct: 566 MQEAELLTMYMEQFTKVGF--EIEEFGQDSY--------------AVRAVPDNLFSIAKK 609
Query: 1286 DVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
++ L+E + L+D + +P + + S +C+ A+ L +E ++ EL
Sbjct: 610 EL-LMEMIDSLSDEISRTLSPDLIDEKVASMSCKAAVKGNMKLSAAEVDTLINELLMLEN 668
Query: 1346 CFQCAHGRPTTVPLVNLE 1363
+ C HGRPT + + E
Sbjct: 669 PYHCPHGRPTIIAMTKRE 686
>gi|301312041|ref|ZP_07217963.1| DNA mismatch repair protein MutL [Bacteroides sp. 20_3]
gi|423339404|ref|ZP_17317145.1| DNA mismatch repair protein mutL [Parabacteroides distasonis
CL09T03C24]
gi|300830143|gb|EFK60791.1| DNA mismatch repair protein MutL [Bacteroides sp. 20_3]
gi|409230785|gb|EKN23646.1| DNA mismatch repair protein mutL [Parabacteroides distasonis
CL09T03C24]
Length = 615
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 179/369 (48%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+ + N + +G V+ VV+ELV N+VDAGA+ + V + ++V+DDG G
Sbjct: 5 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + +D + T GFRGEALASI+ V+ +E+ T+A G
Sbjct: 65 MSETDARMAFERHATSKI---STAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + GS I+ E + G+ ++LF+N P RRK+++S+ + + + + R
Sbjct: 122 GTCLSIAGSNL--ESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINE-FER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+P+V ++E + S +I+ +G L ++A + ISG
Sbjct: 179 IALVNPQVGMSLYHNDAE---IFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A Q+ ++N RY+ HK + +A +
Sbjct: 236 FVGRPDSAKKRGALQFFFVNGRYMKHPYFHKAI------------MQAYEQLIPAGD--- 280
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y + S D+ P KT + F++ +P+ + A R A K A + D D
Sbjct: 281 --MPNYFVYFTLDPSSIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFD 338
Query: 363 MLEDAELPL 371
+ + ++P+
Sbjct: 339 VEDAIDIPV 347
>gi|325281465|ref|YP_004254007.1| DNA mismatch repair protein mutL [Odoribacter splanchnicus DSM
20712]
gi|324313274|gb|ADY33827.1| DNA mismatch repair protein mutL [Odoribacter splanchnicus DSM
20712]
Length = 617
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 173/374 (46%), Gaps = 35/374 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M ++ LP++V N + +G V+ VV+EL+ N++DAGA + V + V ++V+DD
Sbjct: 1 MDIVHLLPDSVANQIAAGEVVQRPASVVKELMENAIDAGAKHIQVVLKNVGKAIIQVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + ERHATSK +A D I T GFRGEAL SI+ VS +E+ T+
Sbjct: 61 GKGMSNMDARMAFERHATSK---IASAQDLFSINTLGFRGEALPSIASVSEVELKTRQEE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
G + S+ ++ V GT + R+LFYN P RRK+++S + L +
Sbjct: 118 DELGTSIFIAASEL------KNQESVSCPKGTNISVRNLFYNIPARRKFLKSDTTE-LRN 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
+ LR+AL +P++SF + + ++ S S +++ FG S L ++
Sbjct: 171 ITNEFLRVALTNPEISFC---LSNNGNVIYNLSPSGLRQRIVNIFGKSINSRLINIDCAT 227
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
G ++I G+I SP + QY ++N+R++ HK + + D
Sbjct: 228 GLVDIKGFICSPEQARKTYGEQYFFVNNRFMKHPFFHKAVTEAYSGLIGVD--------- 278
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
P+Y + SL D+ P KT + F++ + I+ A K
Sbjct: 279 --------CIPSYFIYFTVDPSLIDINIHPTKTEIKFQNETDFFQILLAGIKEALGKFNI 330
Query: 356 HDSFDVDMLEDAEL 369
D D EL
Sbjct: 331 TPPLDFDTAGSIEL 344
>gi|424665163|ref|ZP_18102199.1| DNA mismatch repair protein mutL [Bacteroides fragilis HMW 616]
gi|404575027|gb|EKA79772.1| DNA mismatch repair protein mutL [Bacteroides fragilis HMW 616]
Length = 626
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 186/394 (47%), Gaps = 45/394 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRIIIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L C ++S FG + L V N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSELFNLPACHLRQ---RILSIFGKKLNQQLLSVEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + +++ + K
Sbjct: 274 ----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEHAIWQILSASVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS 387
A S D D + ++P H +S
Sbjct: 330 NAVPSIDFDTEDMPDIPAFEQNLPPEPPKVHFNS 363
>gi|419481225|ref|ZP_14021021.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40563]
gi|379582632|gb|EHZ47510.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae
GA40563]
Length = 643
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 203/431 (47%), Gaps = 46/431 (10%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSGISR 65
+PE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+G GIS
Sbjct: 1 MPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGYGISH 60
Query: 66 DGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYR 125
D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G +G +
Sbjct: 61 DEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 117
Query: 126 KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIAL 185
V +G + + VGT V DLF+N P R KYM+S ++ H + V R+ L
Sbjct: 118 LVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DIVNRLGL 174
Query: 186 VHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYIS 245
HP++SF I E+ T + + +G+ + + +D EISG++S
Sbjct: 175 AHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIAIENSDLDFEISGFVS 232
Query: 246 SPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQAC 305
P + + + + ++IN RY+ ++ N L G SK
Sbjct: 233 LPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFGSKLMVG 273
Query: 306 --PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVDM 363
P ++++ L D+ P K V + ++ + AI ++ ++ + D
Sbjct: 274 RFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ----TLIPDA 329
Query: 364 LEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQKDPVELA 421
LE+ L + R + T L PLK + +++++ E R + E VEL
Sbjct: 330 LEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVADYQVELT 379
Query: 422 EENTEMEFFSQ 432
+E ++ F++
Sbjct: 380 DEGQDLTLFAK 390
>gi|295692268|ref|YP_003600878.1| DNA mismatch repair protein mutl [Lactobacillus crispatus ST1]
gi|295030374|emb|CBL49853.1| DNA mismatch repair protein mutL [Lactobacillus crispatus ST1]
Length = 641
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 177/363 (48%), Gaps = 35/363 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MSKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI+RD + L RHATSK +A+ D + T GFRGEALASIS VS +EI+T A
Sbjct: 59 DNGTGIARDQVDLAFTRHATSK---IANEHDLFKVSTLGFRGEALASISAVSHVEILT-A 114
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G R G G +D GT + +DLF+N P R KY++ SP+ + +
Sbjct: 115 TENAIGIRANYSGGNK--KGQEDAAARKGTKITVKDLFFNTPARLKYLR-SPRTEIMKIV 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R+AL +P VSF + + LL T +++ + + +G +++ A D
Sbjct: 172 DIINRLALGYPHVSFTLSN--TGKILLRTPGNNNLKQTVANVYGRHIAEKMEKFEAKDSD 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+I+G +S P + S + F + +N RY+ +++ N L G
Sbjct: 230 FKITGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQLNTAILDG 270
Query: 298 KRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
SK A P +L ++ L D+ P K V + + I AI + ++K+
Sbjct: 271 YGSKLAARHYPIIVLAIKVDPLLVDVNVHPTKQEVRLSKEKELGRLITSAISNTLVEKVE 330
Query: 356 HDS 358
S
Sbjct: 331 QIS 333
>gi|150008991|ref|YP_001303734.1| DNA mismatch repair protein mutL [Parabacteroides distasonis ATCC
8503]
gi|298375777|ref|ZP_06985733.1| DNA mismatch repair protein MutL [Bacteroides sp. 3_1_19]
gi|423330264|ref|ZP_17308048.1| DNA mismatch repair protein mutL [Parabacteroides distasonis
CL03T12C09]
gi|167017344|sp|A6LEJ8.1|MUTL_PARD8 RecName: Full=DNA mismatch repair protein MutL
gi|149937415|gb|ABR44112.1| DNA mismatch repair protein mutL [Parabacteroides distasonis ATCC
8503]
gi|298266814|gb|EFI08471.1| DNA mismatch repair protein MutL [Bacteroides sp. 3_1_19]
gi|409231880|gb|EKN24728.1| DNA mismatch repair protein mutL [Parabacteroides distasonis
CL03T12C09]
Length = 615
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 179/369 (48%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+ + N + +G V+ VV+ELV N+VDAGA+ + V + ++V+DDG G
Sbjct: 5 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + +D + T GFRGEALASI+ V+ +E+ T+A G
Sbjct: 65 MSETDARMAFERHATSKI---STAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGTEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + GS I+ E + G+ ++LF+N P RRK+++S+ + + + + R
Sbjct: 122 GTCLSIAGSNL--ESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINE-FER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+P+V ++E + S +I+ +G L ++A + ISG
Sbjct: 179 IALVNPQVGMSLYHNDAE---IFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A Q+ ++N RY+ HK + +A +
Sbjct: 236 FVGRPDSAKKRGALQFFFVNGRYMKHPYFHKAI------------MQAYEQLIPAGD--- 280
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y + S D+ P KT + F++ +P+ + A R A K A + D D
Sbjct: 281 --MPNYFVYFTLDPSSIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFD 338
Query: 363 MLEDAELPL 371
+ + ++P+
Sbjct: 339 VEDAIDIPV 347
>gi|423211959|ref|ZP_17198488.1| DNA mismatch repair protein mutL [Bacteroides xylanisolvens
CL03T12C04]
gi|392695323|gb|EIY88546.1| DNA mismatch repair protein mutL [Bacteroides xylanisolvens
CL03T12C04]
Length = 631
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 189/400 (47%), Gaps = 47/400 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIRQAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + V+ GS+ + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKLVIAGSQV------ESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L S +++ FG + L + N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ISGY++ P + A QY ++N RY+ HK +
Sbjct: 232 KISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV----------------------M 269
Query: 299 RSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ Q P +Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 270 EAYEQLIPTGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS--SPLK 391
A S D D + ++P + S H ++ +P K
Sbjct: 330 SAIPSIDFDTEDMPDIPAFEEKISSEPPKIHYNTDYNPFK 369
>gi|225012742|ref|ZP_03703177.1| DNA mismatch repair protein MutL [Flavobacteria bacterium MS024-2A]
gi|225003275|gb|EEG41250.1| DNA mismatch repair protein MutL [Flavobacteria bacterium MS024-2A]
Length = 593
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 186/369 (50%), Gaps = 29/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP+ V N + +G V+ VV+EL+ N+VDAG+ + + V V+V+D+G+G
Sbjct: 5 ISLLPDHVANQIAAGEVIQRPASVVKELLENAVDAGSDTIQLIVKDAGKTLVQVIDNGTG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ + L ERHATSK+ +D + T GFRGEALASI+ ++ +E T+
Sbjct: 65 MNSTDIRLAFERHATSKIN---IAEDLFTLKTKGFRGEALASIAAIAHVETHTRVENEDV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
+ ++GS+ + + + K GT++ + LFYN P RR +++S ++ H + + R
Sbjct: 122 SHCLKIEGSQVIEQTLSTQPK--GTSIAVKSLFYNIPARRNFLKSDTVELRHVIDE-FHR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP++ F F + SE L SS+ L++ FG + S L + ++G
Sbjct: 179 VALAHPEIKFLFFNNGSE---LFDLPSSNLRKRLVAIFGNKLDSLLVPIEETTSLARLNG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKRSK 301
++ P + + Q+ ++N+R++ + P LNH ++A+F+ G L+ +
Sbjct: 236 FVVKPSHAKKTRGQQFFFVNNRFI-RSP---FLNHAVSAAFE---------GLLRPGFN- 281
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 361
P Y L L D+ P KT V F+D + + A + I+ + + D
Sbjct: 282 ----PGYFLFLELDPKTIDINIHPTKTEVKFEDEQSLYAILRSTIKHSLGIFQVIPTLDF 337
Query: 362 DMLEDAELP 370
+ + E+P
Sbjct: 338 EQNQTMEVP 346
>gi|289424087|ref|ZP_06425873.1| DNA mismatch repair protein MutL [Peptostreptococcus anaerobius
653-L]
gi|289155512|gb|EFD04191.1| DNA mismatch repair protein MutL [Peptostreptococcus anaerobius
653-L]
Length = 627
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 176/355 (49%), Gaps = 30/355 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC---YVKVV 57
M IN L ++ N + +G V+ + +++ELV NS+DAG++ ++ + + N +++V
Sbjct: 1 MAKINILDDSTINKIAAGEVVERPSSIIKELVENSIDAGSS--YISIEIENGGKDLIRIV 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+GSGI +D + RHATSK+ + D+ + + + GFRGEALASIS VS LE++TK
Sbjct: 59 DNGSGIDKDDVNKAFLRHATSKINTVEDL---SSLESLGFRGEALASISAVSKLEMLTKT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G R V+ G K + GT + RDLF+N P RRK+++S+ + ++
Sbjct: 116 EEALIGLRIVLDGGKIREKEATSANR--GTQISVRDLFFNTPARRKFLKSNQAEA-QAIT 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
V +IA+ +P + K+I+ + + T S + + +G + L E++
Sbjct: 173 DIVNKIAIGNPSIKIKYIN--NSKTIYETLGDGSIINAIRMIYGRDISENLIEIDYRSKY 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
ISGY+ + + Q++YIN RY+ I K +N D++KA K
Sbjct: 231 FSISGYLGNNNIYRGNRNHQHLYINGRYIKSPNISKKIN---------DAYKAIIPINK- 280
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P Y +N+ + D+ P K V F E +L + +R +K
Sbjct: 281 -------YPIYFVNISVDPAKVDVNIHPSKLEVKFDQEEEILNELSDFVRGILLK 328
Score = 45.1 bits (105), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 34/186 (18%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIK--- 1241
+ ++DQHAA ERIR E K + D ++++ I L N + ++
Sbjct: 460 MIMLDQHAAHERIRFEMYMSKYKAN--------DISVQMLIDPIIMDLDANDMDTVRKNI 511
Query: 1242 ----DWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLA 1297
+G++ + G RS I++ +P FG S + E + L
Sbjct: 512 DVFSSFGFL--VEEFGHRS--------------ISIRGLPNTFGEPESKRFIYELIDGLG 555
Query: 1298 DTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1357
D T + + AC+ AI D + E ++ +L++ S + C HGRPT V
Sbjct: 556 KIDNIYDTKYDEIAEI---ACKSAIKGNDKISIEEAKHLIGQLEECSNPYTCPHGRPTMV 612
Query: 1358 PLVNLE 1363
+ E
Sbjct: 613 KMTRYE 618
>gi|336403765|ref|ZP_08584474.1| DNA mismatch repair protein mutL [Bacteroides sp. 1_1_30]
gi|335945119|gb|EGN06935.1| DNA mismatch repair protein mutL [Bacteroides sp. 1_1_30]
Length = 633
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 186/394 (47%), Gaps = 45/394 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIRQAADL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + V+ GS+ + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKLVIAGSQV------ESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L S +++ FG + L + N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSE---LFNLPVSQLRQRILAIFGKKLNQQLLNIEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ISGY++ P + A QY ++N RY+ HK +
Sbjct: 232 KISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV----------------------M 269
Query: 299 RSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ Q P +Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 270 EAYEQLIPTGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS 387
A S D D + ++P + S H ++
Sbjct: 330 SAIPSIDFDTEDMPDIPAFEEKISSEPPKIHYNT 363
>gi|423261250|ref|ZP_17242151.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL07T00C01]
gi|423267775|ref|ZP_17246755.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL07T12C05]
gi|387774402|gb|EIK36514.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL07T00C01]
gi|392696034|gb|EIY89236.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL07T12C05]
Length = 625
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 184/377 (48%), Gaps = 45/377 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKIIIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L C ++S FG + L V N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSELFNLPACHLRQ---RILSVFGKKLNQQLLSVEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + +I+ + K
Sbjct: 274 ----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASIKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELP 370
A S D D + ++P
Sbjct: 330 NAVPSIDFDTEDMPDIP 346
>gi|386743737|ref|YP_006216916.1| methyl-directed mismatch repair protein [Providencia stuartii MRSN
2154]
gi|384480430|gb|AFH94225.1| methyl-directed mismatch repair protein [Providencia stuartii MRSN
2154]
Length = 651
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 179/367 (48%), Gaps = 33/367 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDDGSG 62
I L + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQILSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGEKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
IS+D LVL RHATSK +A +DD I + GFRGEALASIS VS L + +K +
Sbjct: 63 ISKDELVLALARHATSK---IATLDDLEAIMSMGFRGEALASISSVSRLTLTSKPAEQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + GTTV DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTVKPAAHPNGTTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLA----LLISSFGIEDFSFLDEVNANDGAL 238
IAL P V+ I++ +L+ ++ A L + G ++ G L
Sbjct: 178 IALSRPDVT---INLNHNGKLVKQYRAAKGEAQQERRLANICGTGFMQGALAISWEHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G++ SP S V QY Y+N R + +L+NH +A G L
Sbjct: 235 GIKGWVVSP-SSTPVSDIQYCYVNGRMMRD----RLINHAIR--------QAYEGHLDDN 281
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
+ PAY+L L D+ P K V F V FI + +R+A + AH+
Sbjct: 282 QQ-----PAYVLYLTIDPQQVDVNVHPAKHEVRFHQARLVHDFIYQGVRTALLN--AHEP 334
Query: 359 FDVDMLE 365
++ +E
Sbjct: 335 DELPGIE 341
>gi|188026361|ref|ZP_02961804.2| hypothetical protein PROSTU_03873 [Providencia stuartii ATCC 25827]
gi|188020101|gb|EDU58141.1| DNA mismatch repair domain protein [Providencia stuartii ATCC
25827]
Length = 653
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 172/369 (46%), Gaps = 53/369 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDDGSG 62
I L + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 5 IQILSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGEKLIRIRDNGSG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
IS+D LVL RHATSK +A +DD I + GFRGEALASIS VS L + +K +
Sbjct: 65 ISKDELVLALARHATSK---IATLDDLEAIMSMGFRGEALASISSVSRLTLTSKPAEQSE 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + GTTV DLFYN P RRK+M++ + H + + V R
Sbjct: 122 AWQAYAEG-RDMAVTVKPAAHPNGTTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 179
Query: 183 IALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL P V+ K + + + E L C + L S+
Sbjct: 180 IALSRPDVTINLNHNGKLVKQYRAAKGEAQQERRLANICGTGFMQGALAMSW-------- 231
Query: 229 DEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSW 288
G L I G++ SP S V QY Y+N R + +L+NH
Sbjct: 232 -----EHGDLGIKGWVVSP-SSTPVSDIQYCYVNGRMMRD----RLINHAIR-------- 273
Query: 289 KANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
+A G L + PAY+L L D+ P K V F V FI + +R+
Sbjct: 274 QAYEGHLDDNQQ-----PAYVLYLTIDPQQVDVNVHPAKHEVRFHQARLVHDFIYQGVRT 328
Query: 349 AWMKKIAHD 357
A + AH+
Sbjct: 329 ALLN--AHE 335
>gi|440750146|ref|ZP_20929390.1| DNA mismatch repair protein MutL [Mariniradius saccharolyticus AK6]
gi|436481187|gb|ELP37368.1| DNA mismatch repair protein MutL [Mariniradius saccharolyticus AK6]
Length = 624
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 173/352 (49%), Gaps = 37/352 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+A+ N + +G V+ ++E++ N+VDAGAT++ V V ++++D+G+G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASALKEMLENAVDAGATQIQVIVKEAGKTLIQIIDNGNG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ +D I TFGFRGEALASI+ V+ LE+ T+
Sbjct: 65 MSMTDARMCFERHATSKI---RTTEDLFAIRTFGFRGEALASIAAVAQLEMKTRQASSEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G ++GS+ ++++ +GT+++ ++LF+N P RR +++S+P ++ H V+
Sbjct: 122 GTLIQIEGSEV-------KKQEPVSCPIGTSILVKNLFFNVPARRNFLKSNPVEMRHIVE 174
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R+AL +P++ F + E L S ++ FG L
Sbjct: 175 E-FQRVALAYPEIGFSLYQNDLELFKLVPGKLSQR---IVGIFGKSYQGQLVACREETPH 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
L I GYI P S + Q+ ++N+R++ +H H A+ A G +
Sbjct: 231 LNIHGYIGKPEASKKTRGEQFFFVNNRFIKNNYLH----HAVAN--------AYEGLMGA 278
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P Y+L L S D+ P KT + F D V A I A++ A
Sbjct: 279 DMQ-----PFYVLFLDIDPSHIDINVHPTKTEIKFDDERTVYAVIRSAVKQA 325
>gi|53715353|ref|YP_101345.1| DNA mismatch repair protein MutL [Bacteroides fragilis YCH46]
gi|60683322|ref|YP_213466.1| DNA mismatch repair protein [Bacteroides fragilis NCTC 9343]
gi|81313626|sp|Q5L8M5.1|MUTL_BACFN RecName: Full=DNA mismatch repair protein MutL
gi|81824910|sp|Q64NX1.1|MUTL_BACFR RecName: Full=DNA mismatch repair protein MutL
gi|52218218|dbj|BAD50811.1| DNA mismatch repair protein MutL [Bacteroides fragilis YCH46]
gi|60494756|emb|CAH09562.1| putative DNA mismatch repair protein [Bacteroides fragilis NCTC
9343]
Length = 625
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 184/377 (48%), Gaps = 45/377 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKIIIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L C ++S FG + L V N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSELFNLPACHLRQ---RILSVFGKKLNQQLLSVEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + +I+ + K
Sbjct: 274 ----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASIKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELP 370
A S D D + ++P
Sbjct: 330 NAVPSIDFDTEDMPDIP 346
>gi|421894543|ref|ZP_16325031.1| DNA mismatch repair MutL family protein [Pediococcus pentosaceus
IE-3]
gi|385272633|emb|CCG90403.1| DNA mismatch repair MutL family protein [Pediococcus pentosaceus
IE-3]
Length = 645
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 202/424 (47%), Gaps = 49/424 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ L E + + + +G V+ VV+ELV N++DAG++++ + + ++++D+
Sbjct: 1 MAEIHELSEILADQIAAGEVVERPASVVKELVENAIDAGSSRIDILLEESGLKMIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEAL---ASISDVSLLEIITK 116
GSGI D + + +RHATSK+ +D+ +GT GFRGEAL ASI+DV +L T
Sbjct: 61 GSGIDADQVEIAFKRHATSKISSRSDL---FKVGTLGFRGEALPSIASIADVEMLTATTD 117
Query: 117 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G+ YR G K G D + GT + RDLF+N P R KY++S + L +
Sbjct: 118 GPGKKIHYR----GGKLEDSG--DAQSRQGTDITVRDLFFNTPARLKYLKSLQTE-LSKI 170
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V RIAL +P+V+ +E EL+ T + + +L + +G ++ + V +
Sbjct: 171 TDIVNRIALSYPEVAISL--QNNERELMRTSGNGNIQQVLANIYGAKNAQKMVHVKEQNI 228
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
I GYIS P + + +++ V +N RY+ I K + +G+
Sbjct: 229 DFTIDGYISLPEFTRANRSYITVLVNGRYIKNFQISKAI---------------IDGY-- 271
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
G + P +LN++ L D+ P K V + + +L I +A+ + K
Sbjct: 272 GSKLMVGRYPVAVLNIKTDPILVDVNVHPTKQEVRISEEQTLLDLISKAVFNELADK--- 328
Query: 357 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQR-DHMFHKECERITFQEFQK 415
+++ DA L+ SR + + SS +LA+ F E + +T +
Sbjct: 329 -----NLIPDAVDNLKKSRVK-------VSSSEQLDLARMAISGSFGMEQDHVTIPDTDN 376
Query: 416 DPVE 419
D VE
Sbjct: 377 DEVE 380
>gi|154483534|ref|ZP_02025982.1| hypothetical protein EUBVEN_01238 [Eubacterium ventriosum ATCC
27560]
gi|149735444|gb|EDM51330.1| DNA mismatch repair domain protein [Eubacterium ventriosum ATCC
27560]
Length = 687
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 180/354 (50%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ +V+EL+ N++DAGAT + V + +++ D+
Sbjct: 1 MSKIHVLDQNTINQIAAGEVIDRPASIVKELMENAIDAGATMISVEIKDGGTSLIRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI +D + + RHATSK+ D+ + + GFRGEAL+SI+ V +E+ITK
Sbjct: 61 GSGIEKDDIKVAFLRHATSKIKTALDL---ISVSSLGFRGEALSSIASVCQVELITKTED 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R ++G K + ++ GTT + +++F+N P RRK+++++ + + + +
Sbjct: 118 AITGIRYKIEGGKEVTF--EEIGAPEGTTFIVKNIFFNTPARRKFLKTAQTEAGY-ISEI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V +IAL HP++S FI+ + + T + + ++ + +G + + L E+N ++ ++
Sbjct: 175 VEKIALSHPEISISFIN--NNQTKIHTSGNGNLKDVIYNIYGRDIANNLLEINCSNEFIK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++GYI S ++F+ +IN RY+ I K + D +K F+ +
Sbjct: 233 MTGYIGKAIISKGNRSFENYFINGRYIKNNIISKAI---------EDGYK----FILMQ- 278
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +N L D+ P K + F+ E + FI +I ++K
Sbjct: 279 ---HKYPFTAINFEIDQDLLDVNVHPAKMELRFRKGEAIYPFIMDSIHDTLVEK 329
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 20/198 (10%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
+++ QV + + V G + +IDQHAA E++ E+L + LS + S ++ L L
Sbjct: 500 RLVGQVFETYWIVEYDGKMYIIDQHAAHEKVMFEKLMDR-LSKKEVSSQMINPPIILNLS 558
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-IFGVNLS 1285
L+ + + K+ G+ I G + F + AVP ++ ++
Sbjct: 559 LNEANLINKYMDNFKEIGF--EIEAFGGQDF--------------AVRAVPADLYTLDSY 602
Query: 1286 DVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
DV L++ + L++ +G P + + S +C+ A+ + + E ++++L
Sbjct: 603 DV-LMQIIDNLSNENGR-MVPDMITEKIASMSCKAAVKGNNKMSTQEANALIDQLLSLEN 660
Query: 1346 CFQCAHGRPTTVPLVNLE 1363
+ C HGRPT + + + E
Sbjct: 661 PYNCPHGRPTIISMSHYE 678
>gi|333029336|ref|ZP_08457397.1| DNA mismatch repair protein mutL [Bacteroides coprosuis DSM 18011]
gi|332739933|gb|EGJ70415.1| DNA mismatch repair protein mutL [Bacteroides coprosuis DSM 18011]
Length = 627
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 176/367 (47%), Gaps = 31/367 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DAGA + + + ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGAKNIQIIINDAGKTCMQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ D+ + T GFRGEALASI+ V+ +E++TK
Sbjct: 65 MSEIDARLAFERHATSKINKATDL---FALRTMGFRGEALASIAAVAQVELLTKTDNEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G R + GSK Y G + + G+ + ++LFYN P RR+++++ + L + R
Sbjct: 122 GTRVFISGSK--YEGQEAVATNTGSHFIIKNLFYNIPARRRFLKTDATE-LSKILNEFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+P+VSF E+E L + +I FG + L V+ + ++ISG
Sbjct: 179 IALVNPEVSFSLFSNETE---LFNLPETQIRQRIIHLFGKKLNQELLSVDVDTTLIKISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHK-LLNHLAASFDCSDSWKANNGFLKGKRSK 301
Y++ P S A Q+ ++N RY+ +K ++ D
Sbjct: 236 YVAKPEASRKRGAHQFFFVNGRYMHHPYFYKAVMEAYEELIPVGDQI------------- 282
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK--KIAHDSF 359
+Y L + D+ P KT + F++ + + I ++ K ++ F
Sbjct: 283 -----SYFLYFDVDPATIDVNIHPTKTEIKFENEQAIWQIIAAGVKETLGKFNEVPSIDF 337
Query: 360 DVDMLED 366
D + + D
Sbjct: 338 DTEGMPD 344
>gi|448726241|ref|ZP_21708651.1| DNA mismatch repair protein MutL [Halococcus morrhuae DSM 1307]
gi|445795859|gb|EMA46379.1| DNA mismatch repair protein MutL [Halococcus morrhuae DSM 1307]
Length = 728
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 167/359 (46%), Gaps = 35/359 (9%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDG 60
G I+RL ++ + +G V+ VV+ELV NS+DAGA++V + V V+V DDG
Sbjct: 46 GEIHRLDQSTIERIAAGEVVERPASVVKELVENSLDAGASRVRIAVERGGKDGVRVTDDG 105
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
+G+S + E+H TSK+G + D++ G+ + GFRGEALA+I VS L I TKA
Sbjct: 106 TGMSESAVETAVEKHTTSKIGDIEDLE--AGVESLGFRGEALAAIGAVSRLTIRTKASEA 163
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
G M G + I+ VGTTV DLFYN P RRKY++ + H V +
Sbjct: 164 DRGTELTMVGGEI--ESIEPAGCPVGTTVEIDDLFYNVPARRKYLKQDQTEFGH-VSRVA 220
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSF-------LDEVNA 233
AL +P S +S E+ T S + +++ +G E LDE
Sbjct: 221 TGYALSNPDRSLTLSHDDS--EVFSTTGQGSLESTVLAVYGREVAEAMIPLAGDLDEEGP 278
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
DG I G +S P + + V++N RYV G + + KA G
Sbjct: 279 LDG---IDGVVSHPETTRASTQQCTVFVNGRYVRAGAVRDAI------------VKAYGG 323
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
L R P ++ L P + D+ P K + F D E V +E + +A ++
Sbjct: 324 QLATDR-----YPFAVVFLSVPPNTVDVNVHPRKQEIRFADEETVREQVETTVENALLE 377
>gi|347531826|ref|YP_004838589.1| DNA mismatch repair protein MutL [Roseburia hominis A2-183]
gi|345501974|gb|AEN96657.1| DNA mismatch repair protein MutL [Roseburia hominis A2-183]
Length = 706
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 190/400 (47%), Gaps = 32/400 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
M I L + + + +G V+ + VV+ELV N++DA AT V V + +V++ D+
Sbjct: 1 MPQITLLSQETIDKIAAGEVVERPSSVVKELVENAIDARATAVTVEIKEGGTTFVRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI R+ + L RH+TSK+ + D+ I + GFRGEAL+SI+ VS +E+ITK +
Sbjct: 61 GCGIEREQVPLAFLRHSTSKIKSVEDL---LCIHSLGFRGEALSSIAAVSQVELITKTYS 117
Query: 120 RPNGYRKVMKGSKCLY---LGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G R V++GS+ + +G D GTT + R+LFYN P R+K+++++ + + +
Sbjct: 118 DLTGTRYVIEGSREMSNDEIGAPD-----GTTFIVRNLFYNTPARKKFLKTAQTEG-NYI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R+AL HP VSFKFI + + T +S+ L+ +G + + L V A
Sbjct: 172 SDLIERLALSHPDVSFKFIS--NGQTKMHTSGNSNEKDLIYHIYGRDITAALLPVCAETE 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ G++ P S ++++ +IN RY+ + K + +A GF+
Sbjct: 230 YFSVKGFVGKPMISRGNRSYESYFINGRYIKSALLSKAVE------------EAYKGFM- 276
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
P +L L D+ P K + F + E V + + IR K
Sbjct: 277 ----MQHQYPFCVLYFTMDTELLDVNVHPTKMELRFSNNEEVYRKLYQTIRDVLTHKEFI 332
Query: 357 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQ 396
+ V+ ++ + P + + LH P + Q
Sbjct: 333 PAVPVEEKKEEKRPAITGSLPEPFETKRLHIPPQTQVLPQ 372
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 49/252 (19%)
Query: 1120 HPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPV 1179
+PQ T + + ++ Q + +G FF PD+ + +++ +V + +
Sbjct: 487 NPQETADTV---VYEQQTLEAADTG-------FFTPDAARRH-----RIIGEVFDTYWLI 531
Query: 1180 VAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS-------VAYLDAEQELVLPEIGYQL 1232
L +IDQHAA E++ E +V + S + L AE++ ++
Sbjct: 532 EYEDKLFIIDQHAAHEKVLYERTMARVRTQNFASQTLSPPIILTLSAEEQ--------EM 583
Query: 1233 LQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF-GVNLSDVDLLE 1291
L + EQI+ +G+ + G + F + A+P F V++ + L+
Sbjct: 584 LTRYGEQIRLFGY--EVEPFGGKEF--------------AITAIPADFEAVDMKGM-FLD 626
Query: 1292 FLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAH 1351
L + G P +L + S +C+ AI GDS+ +E +++EL + C H
Sbjct: 627 MLDDFTNISGREA-PELILEKVASMSCKAAIKGGDSISRAEAEQLIDELLSLENPYHCPH 685
Query: 1352 GRPTTVPLVNLE 1363
GRPT + + E
Sbjct: 686 GRPTIISMSKYE 697
>gi|298207994|ref|YP_003716173.1| DNA mismatch repair protein [Croceibacter atlanticus HTCC2559]
gi|83850635|gb|EAP88503.1| putative DNA mismatch repair protein [Croceibacter atlanticus
HTCC2559]
Length = 617
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 180/368 (48%), Gaps = 27/368 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAG+ + + V ++V+DDG G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENALDAGSESIQLIVKEAGKILIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK + +D I T GFRGEALASI+ VS +E+ TK
Sbjct: 65 MSVTDARLSFERHATSK---IKSAEDLFAINTKGFRGEALASIAAVSHVEMKTKQTQDEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++GS+ + K GT++ ++LFYN P RR +++S ++ H + + R
Sbjct: 122 GTYIKIEGSEITTQDVCVTPK--GTSISVKNLFYNIPARRNFLKSDAVEMRHIIDEF-QR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP V+F D+ L + SS+ +++ G + L V ++ISG
Sbjct: 179 VALAHPSVAF---DLHHNGSSLFSLPSSNYRQRIVNILGTKTNERLVPVEEETDIVKISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + + Q+ ++N+RY+ +H + + ++F+ G L+ K
Sbjct: 236 FVGKPEFAKRTRGEQFFFVNNRYIKSSYLH---HSIVSAFE---------GLLRDK---- 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
+ P+Y L L D+ P KT + F+D + A ++ ++ + + D D
Sbjct: 280 -SHPSYFLYLDVDPKTIDINIHPTKTEIKFEDEHTLYAMLKSVVKHSLGQFSVAPVLDFD 338
Query: 363 MLEDAELP 370
D + P
Sbjct: 339 RDSDLDTP 346
>gi|91794555|ref|YP_564206.1| DNA mismatch repair protein [Shewanella denitrificans OS217]
gi|123165778|sp|Q12J93.1|MUTL_SHEDO RecName: Full=DNA mismatch repair protein MutL
gi|91716557|gb|ABE56483.1| DNA mismatch repair protein MutL [Shewanella denitrificans OS217]
Length = 665
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 173/362 (47%), Gaps = 54/362 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I+ LP + N + +G V+ VV+ELV NS+DAGAT+V + + +++ D+GSG
Sbjct: 3 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIDKGGSKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ L DD I +FGFRGEALASIS V+ L + +K +
Sbjct: 63 IPKDELALALSRHATSKVHSL---DDLEAILSFGFRGEALASISSVARLTLTSKTAEQTE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +GS+ + + + G+T+ DLF+N P RR++++S + H + + + R
Sbjct: 120 AWQAHAEGSQ-MDVSLMPAAHPQGSTIEVVDLFFNTPARRRFLKSDKTEFTH-IDEWLKR 177
Query: 183 IALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IA+V + F D++ + L C +F + +
Sbjct: 178 IAIVRTDIHFSLTHNGKLVRQYRAANTDIQMQQRLSQICG---------RAFAEQAITLA 228
Query: 229 DEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSW 288
E +DG L + GYI SP+D+ SV Y Y+N R V KL+NH W
Sbjct: 229 CE---HDG-LSLEGYIQSPHDN-SVTDTNYFYVNGRLVRD----KLVNHAVRQAFAEHQW 279
Query: 289 KANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P+Y+L L PH + D+ P K V F V FI +A++
Sbjct: 280 HQQ--------------PSYVLKLTLDPHQV-DVNVHPAKHEVRFHQSRYVHDFILQALQ 324
Query: 348 SA 349
SA
Sbjct: 325 SA 326
>gi|296132999|ref|YP_003640246.1| DNA mismatch repair protein MutL [Thermincola potens JR]
gi|296031577|gb|ADG82345.1| DNA mismatch repair protein MutL [Thermincola potens JR]
Length = 627
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 171/354 (48%), Gaps = 32/354 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L + N + +G V+ V++ELV N++DAG++K+ + + + V+D+
Sbjct: 1 MGKIKILDDFTANKIAAGEVVERPASVIKELVENALDAGSSKIEIQISRGGLDKITVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R+ L RHATSK+ + AD+D I T GFRGEAL SI+ VS +E+ T+ H
Sbjct: 61 GEGMDREDARLAFHRHATSKIRNDADLD---AIATLGFRGEALPSIAAVSTVEVRTRPHN 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD--VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G R +++G K + DE GTT+ +LF N P R K ++S + H +
Sbjct: 118 EVCGARLIVEGGKI----VKDEDIGCPAGTTITVSNLFANVPARLKNIKSVSLEAGH-IS 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDG 236
V ++A+ +P+VSF ++ ++ L S + + +I+S +G E L +NA
Sbjct: 173 DVVSKLAVAYPEVSFS---LQHDNRFLFKTSGNGDMLDIIASLYGTETARALLPINAERD 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ I+GYI+ P + S + Q +N R V P+ + L S + +
Sbjct: 230 GIGINGYIARPSVTRSTRNHQTFIVNRRIVKSRPLSQALEQGYHSLIMTGRY-------- 281
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
P LN+ P++L D P K V + + + A++ A
Sbjct: 282 ---------PVAFLNIHLPYNLIDPNVHPAKMEVRLFVLDKISDLLSSAVKVAL 326
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 83/206 (40%), Gaps = 26/206 (12%)
Query: 1169 LQQVDKKFIPVVAGGT---LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVL 1225
+ Q+D +I VA G L +IDQHAA ERI E+ + + +A Q + L
Sbjct: 442 IGQIDCTYI--VAQGREAGLYLIDQHAAHERILYEKNMQVPTTNYSQLLAI---PQHIEL 496
Query: 1226 PEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLS 1285
+ Q+L + + G++ I G SF L VP F
Sbjct: 497 THLEAQVLITNILEFQAIGFV--IEHFGGDSF--------------LLRGVPGGFPPGKE 540
Query: 1286 DVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
L+ L T ++ +C+ AI GD LL + ++ +L T L
Sbjct: 541 KKIFLDLLDYFFSNQHKLTNKELREDLIIMMSCKAAIKAGDRLLQGQMEKLLADLSNTEL 600
Query: 1346 CFQCAHGRPTTVPL--VNLEALHKQI 1369
+ C HGRPT + + LE + K++
Sbjct: 601 PYTCPHGRPTVIHISGYELEKMFKRV 626
>gi|271502155|ref|YP_003335181.1| DNA mismatch repair protein MutL [Dickeya dadantii Ech586]
gi|270345710|gb|ACZ78475.1| DNA mismatch repair protein MutL [Dickeya dadantii Ech586]
Length = 645
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 172/350 (49%), Gaps = 32/350 (9%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
+I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G
Sbjct: 2 SIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNGC 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GIS+ L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 62 GISKADLALALARHATSK---IATLDDLEAIVSLGFRGEALASISSVSRLTLTSRTDAQT 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ +G + + + + VGTT+ DLFYN P RRK++++ + +H + + V
Sbjct: 119 EAWQAYAEGRE-MAVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFMH-IDEVVR 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGA 237
RIAL V+ I + +L+ + S A G I +FL V+ G
Sbjct: 177 RIALARFDVA---ITLHHNGKLIRQYRAVSESAQRERRLGSICGAAFLQHALAVSWQHGD 233
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
L I G+++ P S + QY Y+N R + +L+NH +
Sbjct: 234 LNIHGWVADPAGSRQLPEMQYCYVNQRMMRD----RLINH-----------AIRQAYQDQ 278
Query: 298 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
R + Q PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 279 LRDEQQ--PAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|420155666|ref|ZP_14662524.1| DNA mismatch repair protein MutL [Clostridium sp. MSTE9]
gi|394758895|gb|EJF41731.1| DNA mismatch repair protein MutL [Clostridium sp. MSTE9]
Length = 687
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 174/353 (49%), Gaps = 26/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG IN L + V + +G V+ V++ELV NS+DAGAT + V + ++V D+
Sbjct: 1 MGKINLLDKHVAELIAAGEVVERPASVIKELVENSIDAGATSISVEIQNGGALLMRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI+R+ + RHATSK+ H D++ IGT GFRGEALAS++ V+ ++++T+
Sbjct: 61 GSGIAREDVPTAFLRHATSKVLHAEDLES---IGTLGFRGEALASVAAVARVDLLTRIEE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G V++G + L +D GT + RD+F+N P R K+++ + ++V
Sbjct: 118 ELAGTHYVIEGGEEQAL--EDAGCARGTVITVRDIFFNTPARMKFLKKDTVEA-NAVAAV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ +IAL HP+++ +F+ E L + + + FG E + L V +
Sbjct: 175 MDKIALSHPELAVRFV--RDGKETLRAPGDGQLKSAVFAVFGREFTAGLIPVEYELQGVR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + ++ Q +IN R + A ++K + + GK
Sbjct: 233 VTGFVSKPSHARPNRSMQQFFINGRTI---------RSRTAQVALEQAFKGS--LMVGK- 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
PA +L+L P D+ P K V F + PV + +++A K
Sbjct: 281 -----FPACVLHLEIPVQAVDVNVHPGKLEVRFINERPVFDAVYYGVKTALSK 328
>gi|365853735|ref|ZP_09394000.1| DNA mismatch repair protein [Lactobacillus parafarraginis F0439]
gi|363711893|gb|EHL95599.1| DNA mismatch repair protein [Lactobacillus parafarraginis F0439]
Length = 393
Score = 138 bits (348), Expect = 2e-29, Method: Composition-based stats.
Identities = 115/352 (32%), Positives = 172/352 (48%), Gaps = 30/352 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I+ LP + N + +G V+ VV+ELV N++DA +T+V V V +KVVDDG G
Sbjct: 7 IHELPPILANQISAGEVVERPASVVKELVENAIDAHSTQVDVTVENAGLKLIKVVDDGDG 66
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I D + RHATSK + + D + T GFRGEAL SIS V+ +++ K
Sbjct: 67 IDADQVQTAFLRHATSK---ITEQRDLFRVRTLGFRGEALPSISSVA--DVVLKTSTGAM 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G KG K + + RK GTTV R LFYN P R KY+ SSP L + V R
Sbjct: 122 GTEVTYKGGKFVSQSASESRK--GTTVEVRSLFYNTPARLKYL-SSPNTELAKISDIVNR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP+V+F F + ELL T L +L + +G++ S + + + + L I+G
Sbjct: 179 LALSHPEVAFSF--TSNGRELLRTSGRGDLLQVLGAIYGVKTVSKMVPIQSEEPDLAING 236
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++S P + + + + + +N R+V P+ + A D G+ G +
Sbjct: 237 FVSLPELTRASRNYISLILNGRFVRNYPLTR------AVID---------GY--GSKLMI 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLA-FIERAIRSAWMKK 353
P ++N++ +L D+ P K V + EP L I AIR K
Sbjct: 280 GRFPIAVINIKLDPALVDVNVHPTKQEVRISE-EPKLGHMISNAIRQMLATK 330
>gi|167041133|gb|ABZ05893.1| putative DNA mismatch repair protein, C-terminal domain protein
[uncultured marine microorganism HF4000_001A02]
Length = 585
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 190/380 (50%), Gaps = 45/380 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I +L E +RN + +G V+ VV+ELV N +DAGAT++ V V ++V D+GSG
Sbjct: 2 IKQLSEDLRNKISAGEVVERPASVVKELVENGIDAGATEITVVVEKGGQQLIQVTDNGSG 61
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
IS L + E ++TSK+G +DD I T GFRGEALASI+ VS + +++
Sbjct: 62 ISAKELPIAFESYSTSKIG---SVDDLFNIDTLGFRGEALASIASVSEVNVLSANESGDG 118
Query: 123 GYRKVMKGSKCLYLGIDDERKDV-GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ G +LG V GT++ R+LFYN P R+K+++ SP+ V + V
Sbjct: 119 SEMSILNG----HLGAVQPAPAVQGTSITIRNLFYNTPARKKFLK-SPRMEFRKVVEMVR 173
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNANDGAL 238
R AL +P +FK I S++ + S + ++ + D ++ D+ V+ G
Sbjct: 174 RFALSYPDRNFKLI---SDNRDILNLQSEKLESRIVH---VMDPAYRDQLLPVDFTKGDY 227
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL-KG 297
ISGY+ + + QY+++N R++ ++L+N S ++A + +G
Sbjct: 228 TISGYLGNLNLIRTRPGEQYIFLNERFIQ----NRLMN--------SGVYQAYKSIINRG 275
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
+ P + LN+ PH D+ P+KT V FKD + ++ AI A + I H
Sbjct: 276 E------YPFFALNISVPHDEVDVNVHPMKTEVRFKDEWRIYHVLKSAIEEA-LSPILH- 327
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+ D E P SS F+
Sbjct: 328 -----TIPDFEKPGFSSDFE 342
Score = 49.7 bits (117), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 1165 DAKVLQQVDKKFI--PVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAE-- 1220
D + + QV K+I P+ +G L +IDQH A ERI EE+ +A DA
Sbjct: 398 DLEKIWQVHSKYIVSPITSG--LVIIDQHVAHERILYEEV-----------MAAFDANPM 444
Query: 1221 --QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC 1278
Q L+ PE+ F+ + ++ + + + F KN +++ A+P
Sbjct: 445 AAQTLLFPEVMEFSPDEFSTLLDVLPYLEKMGFR-MKEFGKNTVMIE---------AIPS 494
Query: 1279 IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1338
+ E L DT + L S AC+ A+ GD L E +V
Sbjct: 495 EMAWGNEKTIIREMLDNYLDTQKKHASFQEALAA--SFACKAAVKAGDVLNGEEMRELVN 552
Query: 1339 ELKQTSLCFQCAHGRPTTVPL 1359
L T + C HGRP + L
Sbjct: 553 RLFGTKHPYYCPHGRPIIIQL 573
>gi|167765429|ref|ZP_02437542.1| hypothetical protein BACSTE_03819 [Bacteroides stercoris ATCC
43183]
gi|167697057|gb|EDS13636.1| DNA mismatch repair domain protein [Bacteroides stercoris ATCC
43183]
Length = 630
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 188/383 (49%), Gaps = 46/383 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA AT++ V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEATEIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALAS++ V+ +E+ T+ G
Sbjct: 65 MSETDARLSFERHATSKIREASDL---FALRTMGFRGEALASVAAVAEVELKTRPAGEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRLVIAGSKV------ESQEAVSCPKGSNFSVKNLFFNIPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP V+F + S D L +++ FG + L V+ + +
Sbjct: 175 EFERIALVHPDVAFY---LYSNDAELFNLPVMPLRQRILAIFGKKLNQQLLSVDVDTTMI 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SG+++ P S A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGFVAKPEASRKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 ----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELP-LESSR 375
A S D D ++P E SR
Sbjct: 330 NAVPSIDFDTEGMPDIPAFEQSR 352
>gi|332300228|ref|YP_004442149.1| DNA mismatch repair protein mutL [Porphyromonas asaccharolytica DSM
20707]
gi|332177291|gb|AEE12981.1| DNA mismatch repair protein mutL [Porphyromonas asaccharolytica DSM
20707]
Length = 646
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 193/394 (48%), Gaps = 40/394 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ +++ELV N++DA AT++ + + ++V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASMLKELVENAIDAHATQITIELQDAGKELMRVIDDGVG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + +DD + + GFRGEALASI V+ +E++T+
Sbjct: 65 MSPLDARMAFERHATSKI---SSVDDLFTLRSMGFRGEALASIVAVAQIELVTRQVDSDI 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
GY+ ++ GS+ + +VGT++ ++LFYN P RR++++ S ++ H + + R
Sbjct: 122 GYKLLINGSEV--ISSSPTVAEVGTSITVKNLFYNVPARRRFLKGSETELRH-IYRQFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+P+++F + SE +L+ S ++ G L + +SG
Sbjct: 179 IALVYPEIAFT---LYSEGKLIRNLPKSDLQHRIVDLLGKSYSKQLIPIEYQGPLANVSG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+I+ P D+ A Q+ ++N RY+ H+ + ++ S
Sbjct: 236 FITLPRDAKRRGAQQFFFVNGRYMKHPYFHRAVMNVFEDLIAPGSQ-------------- 281
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR-----SAWMKKIAHD 357
P Y + + S D+ P KT + F D + + + +R ++ M I
Sbjct: 282 ---PNYFIYFQVDPSRIDVNIHPTKTEIKFLDEQAIFKLLMVVLREHLSTTSAMPAI--- 335
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLK 391
+F D L E+P + + QSS+ L P++
Sbjct: 336 TFSTDQL--IEIPAYDA---TRQSSSTLQPPPVQ 364
>gi|258511467|ref|YP_003184901.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478193|gb|ACV58512.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 622
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 165/348 (47%), Gaps = 34/348 (9%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVDDGSGIS 64
+P+ + + + +G V+ V+ELV NS+DAGAT++ V + G C V VVDDG G+S
Sbjct: 1 MPKVMADQIAAGEVVARPASCVKELVENSLDAGATRIEVSLAEGGIAC-VTVVDDGEGMS 59
Query: 65 RDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGY 124
+ VL RHATSK+ D+ I T GFRGEALA+I+ V+ + +IT+A G +G
Sbjct: 60 PEDAVLAFHRHATSKVHEPRDL---ARIRTLGFRGEALAAIASVARVRLITRARGEESGV 116
Query: 125 RKVMKGSKC---LYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++G + +G GTT+ RDLF+N P R KY++S+ + SV + V
Sbjct: 117 LVRVEGGEIHPPEPIG-----APFGTTMEVRDLFFNTPARLKYLRSAQTEQARSV-EVVQ 170
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
R +L HP+V+ F+ L T + + +G+ + L EV G +
Sbjct: 171 RESLAHPEVA--FVCRTERQVLFQTPGRGDAREVWAALYGVGEARMLIEVRGTTGDYALR 228
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
GY+ P + S + Y++IN R V + + + G+R
Sbjct: 229 GYVGRPTQARSSRQHGYLFINGRPVRNPAVQQAVER-----------------AYGERLM 271
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P Y L L +L D P K V + V +E A+R+A
Sbjct: 272 VGRYPVYALYLEMDPALVDPNVHPQKWEVRLSEERDVCHLVESAVRAA 319
>gi|317056654|ref|YP_004105121.1| DNA mismatch repair protein MutL [Ruminococcus albus 7]
gi|315448923|gb|ADU22487.1| DNA mismatch repair protein MutL [Ruminococcus albus 7]
Length = 693
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 187/388 (48%), Gaps = 49/388 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I L V + +G V+ V++EL+ N++DAGAT + V + Y++V D+
Sbjct: 1 MSEIRVLSREVSELIAAGEVIDRPASVIKELLENAIDAGATVITVEIKNGGRTYMRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ D L + RHATSK+ D+D I T GFRGEALASI V+ ++++TK
Sbjct: 61 GKGLAPDDLPIAFLRHATSKISQKDDLD---SIMTLGFRGEALASICAVAKVDVMTKRRE 117
Query: 120 RPNGYRKVMKGS------KCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
G ++G+ +C G D GTT + RD+FYN P R K+++ +
Sbjct: 118 DSYGTHYAIEGAEEKISEQC---GCPD-----GTTFIVRDIFYNVPARLKFLKKDSSEAN 169
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
H V V ++ L HP +SFK I ++++E++ T + + S +G E + L EV+
Sbjct: 170 H-VADLVTKLTLSHPDISFKLI-RDNKNEII-TAGDGKIYSSVYSVYGREFANSLIEVDH 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+ + GY P + + FQ ++NSR+V A + ++++ N
Sbjct: 227 TWQGIHVYGYTVKPLSAKPNRKFQNFFVNSRFV---------RSKACAAAIEEAYR--NN 275
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ GK PA +L + P + D+ P K V F D + + + A+++A M+K
Sbjct: 276 IMVGK------FPACVLYIDVPPNTIDVNVHPTKIEVRFSDEKLIHEAVFFAVKNALMEK 329
Query: 354 IAHDSFDVDMLEDAELPLESSR-FQSHQ 380
E EL L SR F H+
Sbjct: 330 D----------EPGELVLNDSRNFTDHE 347
>gi|226326650|ref|ZP_03802168.1| hypothetical protein PROPEN_00500 [Proteus penneri ATCC 35198]
gi|225204871|gb|EEG87225.1| DNA mismatch repair domain protein [Proteus penneri ATCC 35198]
Length = 670
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 169/350 (48%), Gaps = 26/350 (7%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
IN LP + N + +G V+ VV+EL+ NS+DAGAT + + + +++ D+G
Sbjct: 2 AINLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATSIDIDIDKGGAKLIRIRDNGC 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI+RD L L RHATSK ++ +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 62 GINRDDLKLALARHATSK---ISTLDDLEAIMSMGFRGEALASISSVSRLILTSRTQDQE 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ +G + + + I VG+TV DLFYN P RRK++++ + H + + +
Sbjct: 119 EAWQAYAEG-RDMAVTIKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFAH-IDEVIR 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD-EVNANDGALEI 240
RIAL V+ S +S+ +F +++ G L I
Sbjct: 177 RIALSRFDVTINLTHNGKRVRQYRAVKDESQQNRRLSAICGNNFVNQSMQLSWEHGDLAI 236
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
G++ P + QY Y+N R + +L+NH +A G+L+G++
Sbjct: 237 KGWVEHPLSPVQSSEIQYCYVNGRMMRD----RLINHAIR--------QAYEGYLQGEQQ 284
Query: 301 KSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P+Y+L L PH + D+ P K V F + V FI + + S
Sbjct: 285 -----PSYILYLSVDPHQV-DVNVHPAKHEVRFHESRLVHDFIYQGVLSV 328
>gi|423272316|ref|ZP_17251284.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL05T00C42]
gi|423276772|ref|ZP_17255704.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL05T12C13]
gi|392695508|gb|EIY88720.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL05T00C42]
gi|392695984|gb|EIY89188.1| DNA mismatch repair protein mutL [Bacteroides fragilis CL05T12C13]
Length = 625
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 184/377 (48%), Gaps = 45/377 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAHNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKIIIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L C ++S FG + L V N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSELFNLPACHLRQ---RILSVFGKKLNQQLLSVEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + +I+ + K
Sbjct: 274 ----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASIKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELP 370
A S D D + ++P
Sbjct: 330 NAVPSIDFDTEDMPDIP 346
>gi|238787537|ref|ZP_04631335.1| DNA mismatch repair protein mutL [Yersinia frederiksenii ATCC
33641]
gi|238724324|gb|EEQ15966.1| DNA mismatch repair protein mutL [Yersinia frederiksenii ATCC
33641]
Length = 642
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 188/380 (49%), Gaps = 36/380 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
IS+D L L RHATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISKDDLALALARHATSKISSLEDLE---AILSMGFRGEALASISSVSRLMLTSRTAQQNE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VG+TV DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTIKPAAHPVGSTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
IAL V+ I++ +L+ S L S G ++ G L
Sbjct: 178 IALARFDVA---INLSHNGKLMRHYRAAPDPSQHERRLASICGPAFLQHALAISWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S ++ QY Y+N+R + +L+NH +A LK
Sbjct: 235 TIRGWVADPAASRTLSEMQYCYVNNRMMRD----RLINHAIR--------QAYQDLLKDD 282
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 283 QQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQAATP 335
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+++ ED E +E+ R+Q
Sbjct: 336 VLNIN--EDGE-EIEAPRWQ 352
>gi|423318197|ref|ZP_17296094.1| DNA mismatch repair protein mutL [Lactobacillus crispatus FB049-03]
gi|423320487|ref|ZP_17298359.1| DNA mismatch repair protein mutL [Lactobacillus crispatus FB077-07]
gi|405596686|gb|EKB70019.1| DNA mismatch repair protein mutL [Lactobacillus crispatus FB049-03]
gi|405605091|gb|EKB78158.1| DNA mismatch repair protein mutL [Lactobacillus crispatus FB077-07]
Length = 641
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 177/363 (48%), Gaps = 35/363 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MSKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI+RD + L RHATSK +A+ D + T GFRGEALASIS VS +EI+T A
Sbjct: 59 DNGTGIARDQVDLAFTRHATSK---IANEHDLFKVSTLGFRGEALASISAVSHVEILT-A 114
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G R G G +D GT + +DLF+N P R KY++SS +++ V
Sbjct: 115 TENAIGIRANYSGGNK--KGQEDAAARKGTKITVKDLFFNTPARLKYLRSSRTEIMKIV- 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R+ L +P VSF + + LL T +++ + + +G +++ A D
Sbjct: 172 DIINRLVLGYPHVSFTLSN--TGKILLRTPGNNNLKQTVANVYGRHIAEKMEKFEAKDSD 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+I+G +S P + S + F + +N RY+ +++ N L G
Sbjct: 230 FKITGLMSKPELTRSTRNFISILLNGRYI-------------------KNFQLNTAILDG 270
Query: 298 KRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
SK A P +L ++ L D+ P K V + + I AI + ++K+
Sbjct: 271 YGSKLAARHYPIIVLAIKVDPLLVDVNVHPTKQEVRLSKEKELGRLITSAISNTLVEKVG 330
Query: 356 HDS 358
S
Sbjct: 331 QIS 333
>gi|229496657|ref|ZP_04390371.1| DNA mismatch repair protein MutL [Porphyromonas endodontalis ATCC
35406]
gi|229316554|gb|EEN82473.1| DNA mismatch repair protein MutL [Porphyromonas endodontalis ATCC
35406]
Length = 641
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 205/444 (46%), Gaps = 55/444 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ +++ELV NS+DAGA ++ V V +KV DDG G
Sbjct: 5 IHVLPDSIANQIAAGEVIQRPASILKELVENSLDAGAKRIIVEVEEAGKASLKVTDDGCG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S+ + ERHATSK ++D+ D + + GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSQMDARMAFERHATSK---ISDVQDLFSLRSMGFRGEALASIASVAQVELTTRRAEDEM 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
+ + GS + + + VG++ + R++F+N P RR++++S+ ++ H +++ R
Sbjct: 122 ATQLTLNGSDV--VSVRNVAAPVGSSFMVRNVFFNVPARRRFLKSNQTELKHLIEQFE-R 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I LV+P VSF F S+ L +++ + + G L ++ + I+G
Sbjct: 179 IVLVYPGVSFSFY---SDGNLTLNLPATTQRRRITDTLGQSVDKGLIPIHFENEISNING 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++S P + A QY+++N RY+ H+ + + + G+
Sbjct: 236 FVSLPDYAKKRGAEQYLFVNGRYMRHPYFHRAILSVYEKL-------LSPGY-------- 280
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y L S D+ P KT + F D + + + AIR + +A + D +
Sbjct: 281 --APNYFLFFSIDPSRIDVNIHPTKTEIKFLDEQAIFKLLAIAIRQSLSTTMAVPTIDFE 338
Query: 363 MLEDAELPLESSR------------------FQS-----HQSSTHLHSSPLKNLAKQRDH 399
++P+ S + F S QSS +S+P +
Sbjct: 339 HKNVVDIPIYSGKQKEVLPSPDQPLDPDYNPFNSTDLPITQSSAKGYSAPSRRPKVDWKS 398
Query: 400 MF-----HKECERITFQEFQKDPV 418
MF HKE TF + + P+
Sbjct: 399 MFESFEQHKENRATTFSQKEAAPI 422
>gi|283797911|ref|ZP_06347064.1| DNA mismatch repair protein MutL [Clostridium sp. M62/1]
gi|291074378|gb|EFE11742.1| DNA mismatch repair domain protein [Clostridium sp. M62/1]
Length = 734
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 169/351 (48%), Gaps = 26/351 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ VV+EL+ N++DA AT V + + ++V D+
Sbjct: 1 MANIRVLDQNTINQIAAGEVIERPASVVKELLENAIDARATAVTIEIKEGGIGLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI R+ + RHATSK+ ++D + + GFRGEAL+SI+ V+ +E+ITK
Sbjct: 61 GCGIPREEIPTAFLRHATSKI---RTVEDLFTVASLGFRGEALSSIASVAQVELITKTED 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G R + G + I++ GTT + R+LFYN P RRK++++ + H +
Sbjct: 118 SMSGTRYCIDGGE--EKSIEEVGAPEGTTFLVRNLFYNTPARRKFLKTPATEGAH-IADL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V +I+L HP+VS +FI ++ L T + S ++ + +G E S L V+ + +
Sbjct: 175 VEKISLSHPEVSIRFI--QNGQSRLHTSGNHSLRDIIYTIYGREIASNLLPVDMGEDPVR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G+I P + + F+ +IN RY+ I+K + F +
Sbjct: 233 VTGFIGKPLIARGNRNFENYFINGRYIKSSLINKAIEDAYKPFMMQHKY----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
P +L+ S D+ P K + F+D E + + + A
Sbjct: 282 ------PFTMLHFAIESSFLDVNVHPAKMELRFRDGEMIYKMVYHTVSMAL 326
Score = 46.6 bits (109), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 29/226 (12%)
Query: 1152 FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEG 1211
F P +++ E+ +++ Q+ + V +L +IDQHAA E++ E+ + S E
Sbjct: 532 LFEPKLLSREAREEHRIIGQLFDTYWLVEYRDSLYIIDQHAAHEKVLYEKTVASLKSREY 591
Query: 1212 KSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVI 1271
S ++ L L LL+ + E G+ I G R +
Sbjct: 592 TS-QMINPPIILTLNSSEKLLLEKYMEHFTGIGF--EIEPFGGREY-------------- 634
Query: 1272 TLLAVPC-IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSK----ACRGAIMFGD 1326
+ AVP +F + ++ L+E + L+D + +LN K +C+ A+
Sbjct: 635 AVRAVPANLFSIAKKEL-LMEMIDGLSDEMDRGNSD-----LLNEKIASMSCKAAVKGNH 688
Query: 1327 SLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1372
L +E +++EL + + C HGRPT + + E L K+ ++
Sbjct: 689 RLSEAEARALIDELLELENPYACPHGRPTIISMSRYE-LEKKFKRI 733
>gi|440714151|ref|ZP_20894736.1| DNA mismatch repair protein MutL [Rhodopirellula baltica SWK14]
gi|436440950|gb|ELP34231.1| DNA mismatch repair protein MutL [Rhodopirellula baltica SWK14]
Length = 705
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 173/350 (49%), Gaps = 28/350 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I +LP + N + +G V+ VV+EL+ NS+DAG+T++ + + G +++ DDG G
Sbjct: 15 IRQLPAHLVNQIAAGEVIERPASVVKELLENSIDAGSTRIELSLEGGGVELIRISDDGCG 74
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ + L L HATSKL D + +GT GFRGEALASI+ VS + I ++A G+
Sbjct: 75 MTAEQLPLAVTSHATSKL---PDDESLFHVGTLGFRGEALASIASVSQMTIRSRAEGQDG 131
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + ++G G VGT + R+LF+N PVRRK+++ +P+ + + R
Sbjct: 132 GCQIDIRGGVIETPGPCG--CPVGTVIEVRNLFFNTPVRRKFLK-TPQTERGHIVEAFTR 188
Query: 183 IALVHPKVSFKFIDMESED-ELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
+AL +PKV F + + E +LL T + + S FG E L + D ++IS
Sbjct: 189 LALANPKVHFVLRNGDKEMFDLLPTTRWADRIE---SFFGTEISEALIPIENQDETVQIS 245
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
GY P S QY+++N R++ + L H +A G L R
Sbjct: 246 GYACDPSVSRGNNRMQYLFLNGRHIRD----RALQHALG--------EAYRGMLMVGRH- 292
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
P L +R P + D+ P K V F D V + + + +R ++
Sbjct: 293 ----PVCFLRMRMPADMIDVNVHPAKLEVRFTDSGRVYSRLLQTLRQRFL 338
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 19/189 (10%)
Query: 1171 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1230
QV ++++ + VIDQHA ER+ E + KVL + A L+A+Q LV +
Sbjct: 510 QVHQRYLVTQDEKGMVVIDQHALHERVLYERVCQKVLHED----ASLEAQQLLVPEPVSL 565
Query: 1231 QLLQNFAE-QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1289
+ A ++KD + + F L+Q + P + N D+
Sbjct: 566 TPAERAAALEVKDTLSRIGLEIE---DFGGETILIQ---------SYPAML-PNKPPADM 612
Query: 1290 LEFLQQLADTDGSSTTPPSVLR-VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQ 1348
L + + G P +L +L++ AC+ A+ GD L P E ++E+
Sbjct: 613 LRTVLESVMGAGRDPNPKDLLNHLLSTVACKAAVKAGDPLSPEEITSLLEQKDLYQETHH 672
Query: 1349 CAHGRPTTV 1357
C HGRPT +
Sbjct: 673 CPHGRPTAL 681
>gi|29349259|ref|NP_812762.1| DNA mismatch repair protein mutL [Bacteroides thetaiotaomicron
VPI-5482]
gi|298384799|ref|ZP_06994358.1| DNA mismatch repair protein MutL [Bacteroides sp. 1_1_14]
gi|383120181|ref|ZP_09940912.1| DNA mismatch repair protein mutL [Bacteroides sp. 1_1_6]
gi|81842112|sp|Q8A120.1|MUTL_BACTN RecName: Full=DNA mismatch repair protein MutL
gi|29341167|gb|AAO78956.1| DNA mismatch repair protein mutL [Bacteroides thetaiotaomicron
VPI-5482]
gi|251840776|gb|EES68858.1| DNA mismatch repair protein mutL [Bacteroides sp. 1_1_6]
gi|298261943|gb|EFI04808.1| DNA mismatch repair protein MutL [Bacteroides sp. 1_1_14]
Length = 640
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 181/377 (48%), Gaps = 45/377 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++++DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQIIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREAADL---FALRTMGFRGEALASIAAVAQVELKTRLESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKLVIAGSKV------ESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L S +++ FG + L + N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSE---LFNLPVSPLRQRILAIFGKKLNQQLLNIEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ISGYI+ P + A QY ++N RY+ HK +
Sbjct: 232 KISGYIAKPETARKKGAHQYFFVNGRYMRHPYFHKAV----------------------M 269
Query: 299 RSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ Q P +Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 270 EAYEQLIPVGEQVSYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELP 370
A S D D + ++P
Sbjct: 330 SAIPSIDFDTEDMPDIP 346
>gi|421221742|ref|ZP_15678543.1| DNA mismatch repair protein mutL domain protein [Streptococcus
pneumoniae 2070531]
gi|395590833|gb|EJG51133.1| DNA mismatch repair protein mutL domain protein [Streptococcus
pneumoniae 2070531]
Length = 302
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 144/267 (53%), Gaps = 9/267 (3%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GIS D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GYGISHDEVELALRRHATSKIKNQADLFR---IRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEVEE--VIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSH-IIDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYV 266
ISG++S P + + + + ++IN RY+
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI 259
>gi|32475085|ref|NP_868079.1| DNA mismatch repair protein [Rhodopirellula baltica SH 1]
gi|32445625|emb|CAD75626.1| DNA mismatch repair protein [Rhodopirellula baltica SH 1]
Length = 705
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 173/350 (49%), Gaps = 28/350 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I +LP + N + +G V+ VV+EL+ NS+DAG+T++ + + G +++ DDG G
Sbjct: 15 IRQLPAHLVNQIAAGEVIERPASVVKELLENSIDAGSTRIELSLEGGGVELIRISDDGCG 74
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ + L L HATSKL D + +GT GFRGEALASI+ VS + I ++A G+
Sbjct: 75 MTAEQLPLAVTSHATSKL---PDDESLFHVGTLGFRGEALASIASVSQMTIRSRAEGQDG 131
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + ++G G VGT + R+LF+N PVRRK+++ +P+ + + R
Sbjct: 132 GCQIDIRGGVIETPGPCG--CPVGTVIEVRNLFFNTPVRRKFLK-TPQTERGHIVEAFTR 188
Query: 183 IALVHPKVSFKFIDMESED-ELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
+AL +PKV F + + E +LL T + + S FG E L + D ++IS
Sbjct: 189 LALANPKVHFVLRNGDKEMFDLLPTTRWADRIE---SFFGTEISEALIPIENQDETVQIS 245
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
GY P S QY+++N R++ + L H +A G L R
Sbjct: 246 GYACDPSVSRGNNRMQYLFLNGRHIRD----RALQHALG--------EAYRGMLMVGRH- 292
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
P L +R P + D+ P K V F D V + + + +R ++
Sbjct: 293 ----PVCFLRMRMPADMIDVNVHPAKLEVRFTDSGRVYSRLLQTLRQRFL 338
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 19/189 (10%)
Query: 1171 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1230
QV ++++ + VIDQHA ER+ E + KVL + A L+A+Q LV +
Sbjct: 510 QVHQRYLVTQDEKGMVVIDQHALHERVLYERVCQKVLHED----ASLEAQQLLVPEPVSL 565
Query: 1231 QLLQNFAE-QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1289
+ A ++KD + + F L+Q + P + N D+
Sbjct: 566 TPAERAAALEVKDTLSRIGLEIE---DFGGETILIQ---------SYPAML-PNKPPADM 612
Query: 1290 LEFLQQLADTDGSSTTPPSVLR-VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQ 1348
L + + G P +L +L++ AC+ A+ GD L P E ++E+
Sbjct: 613 LRTVLESVMGAGRDPNPKDLLNHLLSTVACKAAVKAGDPLSPEEITSLLEQKDLYQETHH 672
Query: 1349 CAHGRPTTV 1357
C HGRPT +
Sbjct: 673 CPHGRPTAL 681
>gi|353240970|emb|CCA72812.1| hypothetical protein PIIN_06748 [Piriformospora indica DSM 11827]
Length = 629
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 175/366 (47%), Gaps = 40/366 (10%)
Query: 11 VRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGISRDGLVL 70
R+ +RS +L L++++ ELV N++DA AT++ + V +V D+G GIS+DG+ +
Sbjct: 16 TRSKLRSTQILTSLSQIISELVQNALDADATEIHAAINVAEWECRVQDNGVGISKDGMKI 75
Query: 71 LG-----ERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYR 125
L R+A+SK + ++ + TFGFRGEALAS +DV LEI ++ + +
Sbjct: 76 LAGGSSTGRYASSKAYSINSLNS---VSTFGFRGEALASAADVCYLEISSRTKTLKDTWS 132
Query: 126 KVMKGSKCLYLG--IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRI 183
++KG K LY G I +R GT V RD FYN PVRRK S K L +VK+ +
Sbjct: 133 VILKGGKQLYYGPAIHWKRISHGTMVCIRDAFYNLPVRRKS-HPSQAKTLETVKQDLRTF 191
Query: 184 ALVHPKVSFKFIDM------ESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
AL+ P V F D+ + +++ S S L + FG + + V+
Sbjct: 192 ALLFPHVQFVLEDLSETSTKQHRGKVITIQKSPSTLDAFRAMFGNSLAANVHIVHEGGDG 251
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+I G+I + KA+QY+++N R P+ L C +S N ++
Sbjct: 252 CKIGGFIG--LEGTVSKAYQYLFLNKR-----PLEDL---------CDESPTKPN--IRR 293
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS-----AWMK 352
K P Y+L+++ D P KT + + + + RAI + +M
Sbjct: 294 SPRKLDKRPIYVLHIQTSQKAVDALLQPSKTVMYLANLNDIENMLTRAINTFLQDNGYMT 353
Query: 353 KIAHDS 358
K A S
Sbjct: 354 KAAKHS 359
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 1163 LEDAKVLQQVDKKFIPVVAG------GTLAVIDQHAADERIRLEELRHKVLSG 1209
L A+VL QVD KF+ + L +IDQHA DERIR+E+L + SG
Sbjct: 494 LAAAEVLGQVDCKFVACITAKKPELDSVLVLIDQHAMDERIRVEKLLAEFFSG 546
>gi|256841008|ref|ZP_05546515.1| DNA mismatch repair protein mutL [Parabacteroides sp. D13]
gi|256736851|gb|EEU50178.1| DNA mismatch repair protein mutL [Parabacteroides sp. D13]
Length = 621
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 179/369 (48%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+ + N + +G V+ VV+ELV N+VDAGA+ + V + ++V+DDG G
Sbjct: 11 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 70
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + +D + T GFRGEALASI+ V+ +E+ T+A G
Sbjct: 71 MSETDARMAFERHATSKI---STAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGAEL 127
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + GS I+ E + G+ ++LF+N P RRK+++S+ + + + + R
Sbjct: 128 GTCLSIAGSNL--ESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINE-FER 184
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+P+V ++E + S +I+ +G L ++A + ISG
Sbjct: 185 IALVNPQVGMSLYHNDAE---IFNLPESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISG 241
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A Q+ ++N RY+ HK + +A +
Sbjct: 242 FVGRPDSAKKRGALQFFFVNGRYMKHPYFHKAI------------MQAYEQLIPAGD--- 286
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y + S D+ P KT + F++ +P+ + A R A K A + D D
Sbjct: 287 --MPNYFVYFTLDPSSIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFD 344
Query: 363 MLEDAELPL 371
+ + ++P+
Sbjct: 345 VEDAIDIPV 353
>gi|320103230|ref|YP_004178821.1| DNA mismatch repair protein MutL [Isosphaera pallida ATCC 43644]
gi|319750512|gb|ADV62272.1| DNA mismatch repair protein MutL [Isosphaera pallida ATCC 43644]
Length = 699
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 177/358 (49%), Gaps = 28/358 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L +V N + +G V+ VV+EL+ N++DAGA ++ + V ++VVD+
Sbjct: 1 MGIIRELSPSVINQIAAGEVVERPASVVKELLENAIDAGADRIEIAVERGGKDLIRVVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D L L HATSK L + DD I T GFRGEALA+I+++S + ++
Sbjct: 61 GKGIAPDDLPLAFRPHATSK---LREADDLQRIATLGFRGEALAAIAEISKVCCESRTAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G+R + G + ++ VGT + R LF+N PVRR +++S + H V +
Sbjct: 118 AETGFRLRIDGGRA--GAVEPCSCPVGTIMEVRHLFFNTPVRRTFLKSDATEAGH-VAEM 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGAL 238
V R+AL HP V F S +++ +++ L I++ FG E L V + +
Sbjct: 175 VTRLALAHPSVHFT---SRSSGKVVFDLPATTCLTDRIAALFGRELADQLIGVEHDVPGV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G++S P S S FQY+++N RYV + L H A +A G L
Sbjct: 232 GLRGFVSHPSHSRSSSKFQYLFLNGRYVRD----RSLQHALA--------EAYRGLLMVG 279
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
R P LNL P D+ P K V F++ + + + AI+ A++K H
Sbjct: 280 R-----YPVAFLNLEVPLDQVDVNVHPTKIEVRFREAHLIYSALYSAIKQAFLKTDLH 332
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 26/192 (13%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L VIDQHA ERI EE + ++ G +S Q L++PE A +
Sbjct: 530 LMVIDQHALHERILFEEFKERLERGGVES-------QRLLIPETVELTPAEAAALTERLD 582
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1304
+ + + S F + L+ A+P L V+ ++ LAD
Sbjct: 583 LLAKLGIELS-GFGGSTVLVH---------ALPA----QLKHVEADRLVRDLADHLLQRP 628
Query: 1305 TPPS----VLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV 1360
PP+ ++ +LN AC+ AI G L P E ++E C HGRPT + L+
Sbjct: 629 LPPTPEGLMMDLLNMMACKAAIKAGQKLSPDEIDALLERRHLARDSHHCPHGRPTVL-LL 687
Query: 1361 NLEALHKQIAQL 1372
L KQ ++
Sbjct: 688 TKSDLEKQFGRV 699
>gi|390943214|ref|YP_006406975.1| DNA mismatch repair protein MutL [Belliella baltica DSM 15883]
gi|390416642|gb|AFL84220.1| DNA mismatch repair protein MutL [Belliella baltica DSM 15883]
Length = 627
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 175/367 (47%), Gaps = 39/367 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+A+ N + +G V+ ++E++ N+VDAGAT+V V V + V+D+G G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASALKEMLENAVDAGATQVQVVVKDAGKALMLVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ + ERHATSK+ AD+ I TFGFRGEA+ASI+ VS +E+ T+ G
Sbjct: 65 MTLTDARMCFERHATSKIRTSADL---FAIHTFGFRGEAMASIAAVSQVEMKTRQAGDEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G ++GS+ +++ + GT++ ++LF+N P RR +++S+ ++ H V +
Sbjct: 122 GTLIQIEGSEF------KKQEPISCPQGTSIAVKNLFFNVPARRNFLKSNAVEMKHLVDE 175
Query: 179 CVLRIALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
R+AL +P++ FKF DME L ++ FG L
Sbjct: 176 -FQRVALSYPEIGFKFTQNDME-----LFNLVPGKLSQRIVGIFGKNYQGQLVTCQEETP 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
L I GYI P ++ + QY ++N+R++ +H +++ SD
Sbjct: 230 HLNIKGYIGKPENAKKTRGEQYFFVNNRFIRSNYLHHAVSNAYEGLMPSDMQ-------- 281
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
P Y+L L S D+ P KT + F D V A I A++ +
Sbjct: 282 ---------PFYVLFLEIDPSHIDINVHPTKTEIKFDDERTVYAVIRSAVKQSLGAHNVV 332
Query: 357 DSFDVDM 363
+ D +M
Sbjct: 333 PALDFNM 339
>gi|227326201|ref|ZP_03830225.1| DNA mismatch repair protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 670
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 173/351 (49%), Gaps = 32/351 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHATSK---IATLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGAL 238
IAL V+ I + +L+ ++ + G I +FL V+ G L
Sbjct: 178 IALARFDVA---ITLHHNGKLMRQYRAAPDKSQYERRLGSICGATFLQHALAVSWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P + + QY Y+N R + +L+NH A + +
Sbjct: 235 TIHGWVAEPVGAKQLPDMQYCYVNQRMMRD----RLINH------------AIRQAYQDQ 278
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
S Q PAY+L L PH + D+ P K V F V FI +A+ S
Sbjct: 279 LSDDQQ-PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMS 327
>gi|50122856|ref|YP_052023.1| DNA mismatch repair protein [Pectobacterium atrosepticum SCRI1043]
gi|81827002|sp|Q6D065.1|MUTL_ERWCT RecName: Full=DNA mismatch repair protein MutL
gi|49613382|emb|CAG76833.1| DNA mismatch repair protein [Pectobacterium atrosepticum SCRI1043]
Length = 651
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 174/358 (48%), Gaps = 32/358 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHATSK---IATLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGAL 238
IAL V+ I + +L+ ++ G I +FL V+ G L
Sbjct: 178 IALARFDVA---ITLHHNGKLMRQYRAAPDKNQYERRLGSICGATFLQHALAVSWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P + + QY Y+N R + +L+NH A + +
Sbjct: 235 TIHGWVADPVGAKQLPDMQYCYVNQRMMRD----RLINH------------AIRQAYQDQ 278
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
S Q PAY+L L PH + D+ P K V F V FI +A+ S + A
Sbjct: 279 LSDEQQ-PAYVLYLEIDPHQV-DVNVHPAKQEVRFHQARLVHDFIYQAVMSVLQQASA 334
>gi|89100700|ref|ZP_01173556.1| DNA mismatch repair protein [Bacillus sp. NRRL B-14911]
gi|89084575|gb|EAR63720.1| DNA mismatch repair protein [Bacillus sp. NRRL B-14911]
Length = 640
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 164/331 (49%), Gaps = 28/331 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I +L +A+ N + +G V+ VV+ELV NS+DAG+T + + ++++D+
Sbjct: 1 MGKIVQLDDALSNKIAAGEVVERPASVVKELVENSIDAGSTIIEIDAEEAGLAKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI D ++ +RHATSK + D +D I T GFRGEAL SI+ VS LE+ T
Sbjct: 61 GEGIEEDDVMTAFQRHATSK---IKDENDLFRIRTLGFRGEALPSIASVSRLELKTSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R +++G K RK GT + DLFYN P R KYM++ + L ++
Sbjct: 118 --AGTRILIEGGKVAEFEKAASRK--GTDITISDLFYNTPARLKYMKTIHTE-LGNITDV 172
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP+VSF+ + + +LL T + + +L S +G+ + V A+
Sbjct: 173 VNRLALAHPEVSFRLV--HNGRKLLHTAGNGNVQQVLASIYGMNIVKKMIPVEASSLDFH 230
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ GYI+ P + + + + IN R++ P+ K + + + L R
Sbjct: 231 VHGYIALPEITRASRNYISTMINGRFIKNYPLVKAIQ------------EGYHTLLPIGR 278
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHV 330
P LLN++ L D+ P K V
Sbjct: 279 -----YPIVLLNVQMDPLLVDVNVHPSKMEV 304
>gi|395230101|ref|ZP_10408409.1| DNA mismatch repair protein mutL [Citrobacter sp. A1]
gi|424733302|ref|ZP_18161867.1| dna mismatch repair protein mutl [Citrobacter sp. L17]
gi|394716395|gb|EJF22150.1| DNA mismatch repair protein mutL [Citrobacter sp. A1]
gi|422892490|gb|EKU32349.1| dna mismatch repair protein mutl [Citrobacter sp. L17]
Length = 623
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 173/368 (47%), Gaps = 53/368 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ A +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IKKDELALALARHATSKI---ASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQPE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ K + + + + R
Sbjct: 120 AWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIRR 177
Query: 183 IALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ +D + E L C + L + IE
Sbjct: 178 IALARFDVTINLSHNGKVVRQYRAVAVDGQKERRLGAICGTP----FLEHALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLRGWVADPNHTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKI 354
S +++
Sbjct: 327 LSVLQQQL 334
>gi|295133314|ref|YP_003583990.1| DNA mismatch repair protein MutL [Zunongwangia profunda SM-A87]
gi|294981329|gb|ADF51794.1| DNA mismatch repair protein MutL [Zunongwangia profunda SM-A87]
Length = 619
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 196/414 (47%), Gaps = 43/414 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ V++EL+ N++DA A + V V +++VDDG+G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVIKELLENAIDAYAHNIQVVVKDAGKTLIQIVDDGAG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK + +D + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSLTDARMCFERHATSK---IKSAEDLFSLNTKGFRGEALASIAAIAHVELKTKPQNEEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G ++GSK + + V GT++ ++LFYN P RR +++S ++ H + +
Sbjct: 122 GTCIKIEGSK-----VTSQEPCVTPKGTSLCVKNLFYNIPARRNFLKSDAVELRHIIDE- 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
R+A+ HP ++F E L S++ + + FG + L VN + ++
Sbjct: 176 FQRVAMAHPSIAFSLFHNGGE---LFQLPSTNHRQRITNIFGAKTNEKLVPVNEDTEIVK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGK 298
ISG++ P + + Q+ ++N+R++ K P LNH ++A+FD G LK K
Sbjct: 233 ISGFVGKPEFAKRSRGEQFFFVNNRFI-KSP---YLNHAVSAAFD---------GLLKEK 279
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
P+Y L L D+ P KT + F D + A + AI+ + +
Sbjct: 280 -----TYPSYFLYLDVNPKSIDINIHPTKTEIKFDDEHALYAMLRSAIKHSLGQFSVAPV 334
Query: 359 FDVDMLEDAELPLESSRFQSHQSSTHLHSS--PLKN------LAKQRDHMFHKE 404
D D + + P E Q+ + S P +N + + H F KE
Sbjct: 335 LDFDRDANLDTPYEYKNRQAQVPKIEVDRSFNPFENELNTSSIRSGKSHNFRKE 388
>gi|150025219|ref|YP_001296045.1| DNA mismatch repair protein MutL [Flavobacterium psychrophilum
JIP02/86]
gi|167017341|sp|A6GYR1.1|MUTL_FLAPJ RecName: Full=DNA mismatch repair protein MutL
gi|149771760|emb|CAL43234.1| DNA mismatch repair protein MutL [Flavobacterium psychrophilum
JIP02/86]
Length = 613
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 167/345 (48%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGA+ + + ++V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASDIKLICKEAGKVLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ D+ D + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSVTDARLCFERHATSKIRQAEDLFD---LHTKGFRGEALASIAAIAHVEMKTKQDQEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G +++GSK ++ D GT+ + ++LF+N P RR +++S ++ H + + R
Sbjct: 122 GTHIIIEGSK--FVSQDVAVLPKGTSFLVKNLFFNIPARRNFLKSDIVELRHIIDEF-QR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL H + F F SE L S+ +++ F + L + N L I G
Sbjct: 179 VALAHHNIHFTFYHNGSE---LFNLPQSNVRQRIVNIFSGKTNEKLVPIQENTDILSIQG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+I P + K Q+ ++N R++ G +H + A G L+
Sbjct: 236 FIGKPEFAKKSKGEQFFFVNDRFIKSGYLHHAI------------MNAYEGLLRDG---- 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
A P+Y L L P D+ P KT + F D + + A + A +
Sbjct: 280 -AQPSYFLYLDVPPHTIDINIHPTKTEIKFDDEQALYAILRSATK 323
>gi|270295718|ref|ZP_06201918.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273122|gb|EFA18984.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 638
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 186/379 (49%), Gaps = 38/379 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ VV+ELV N++DA A ++ V + ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVVKELVENAIDAEAEEIHVLITDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREAADL---FALRTMGFRGEALASIAAVAEVELKTRPASEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G R ++ GSK G + G+ ++LF+N P RRK+++++ + L ++ R
Sbjct: 122 GTRLLIAGSKV--EGQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILTEFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALVHP+V+F + S D L +++ FG + L V+ N ++ISG
Sbjct: 179 IALVHPEVAFY---LYSNDTELFNLPVMPLRQRIMAVFGKKLNQQLLSVDVNTTMIKISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+++ P S A QY ++N RY+ HK + D+++
Sbjct: 236 FVAKPETSRKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE------------- 273
Query: 303 QACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
Q PA Y + + D+ P KT + F++ + + + A++ + K A
Sbjct: 274 QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGKFSAIP 333
Query: 358 SFDVDMLEDAELP-LESSR 375
+ D D + ++P E +R
Sbjct: 334 TIDFDTEDMPDIPAFEQAR 352
>gi|402846663|ref|ZP_10894972.1| DNA mismatch repair protein, C-terminal domain protein
[Porphyromonas sp. oral taxon 279 str. F0450]
gi|402267355|gb|EJU16750.1| DNA mismatch repair protein, C-terminal domain protein
[Porphyromonas sp. oral taxon 279 str. F0450]
Length = 637
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 176/380 (46%), Gaps = 39/380 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LPE++ N + +G V+ +V+ELV NS+DAGA ++ + VG + V DDG G
Sbjct: 5 IRLLPESIANQIAAGEVVPAPAYLVKELVENSIDAGAKQIQIEVVGAGRQSISVTDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK L +DD + T GFRGEALA+I+ V +E+ T+ +
Sbjct: 65 MSPTDARMAFERHATSK---LQTIDDLQHLSTMGFRGEALAAIAAVCQVELRTRTADQEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV------GTTVVSRDLFYNQPVRRKYMQSSPKKV-LHS 175
G +++G+K R + GT++ + ++FYN P RRK++++ + L
Sbjct: 122 GTELIIEGAKV--------RSQMPVACSPGTSLKAMNIFYNTPGRRKHLEARKESTELME 173
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
+ + ++AL +P++SF D++L +SS +I G + L V+
Sbjct: 174 IWREFAKVALANPQISFTLRGAGKYDKIL---PASSLKERIIDIGGAKLSRALIPVSYES 230
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
I G+I +P S+ A QY+++N R++ HK A S + A N
Sbjct: 231 AFCTIRGFIGTPTTSLKQGAQQYLFVNDRFIRHPYFHK-----AISLAYENFIPAGN--- 282
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
P Y L P D+ P KT V F D + ++ IR A+
Sbjct: 283 ---------QPQYFLYFTIPAENIDVNIHPQKTDVRFLDESTIFQVLQSLIRDAFSSHAL 333
Query: 356 HDSFDVDMLEDAELPLESSR 375
D + E+P S R
Sbjct: 334 TPIIDFENASPIEIPAYSGR 353
>gi|253690084|ref|YP_003019274.1| DNA mismatch repair protein MutL [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259511146|sp|C6DFJ9.1|MUTL_PECCP RecName: Full=DNA mismatch repair protein MutL
gi|251756662|gb|ACT14738.1| DNA mismatch repair protein MutL [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 669
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 175/358 (48%), Gaps = 32/358 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHATSK---IATLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGAL 238
IAL V+ I + +L+ ++ + G I +FL V+ G L
Sbjct: 178 IALARFDVA---ITLHHNGKLIRQYRAAPDKSQYERRLGNICGATFLQHALAVSWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P + + QY Y+N R + +L+NH A + +
Sbjct: 235 TIHGWVADPVGAKQLPDMQYCYVNQRMMRD----RLINH------------AIRQAYQDQ 278
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
S Q PAY+L L PH + D+ P K V F V FI +A+ S + A
Sbjct: 279 LSDDQQ-PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMSVLQQASA 334
>gi|160890581|ref|ZP_02071584.1| hypothetical protein BACUNI_03024 [Bacteroides uniformis ATCC 8492]
gi|317479877|ref|ZP_07938994.1| DNA mismatch repair protein MutL [Bacteroides sp. 4_1_36]
gi|156859580|gb|EDO53011.1| DNA mismatch repair domain protein [Bacteroides uniformis ATCC
8492]
gi|316903951|gb|EFV25788.1| DNA mismatch repair protein MutL [Bacteroides sp. 4_1_36]
Length = 638
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 186/379 (49%), Gaps = 38/379 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ VV+ELV N++DA A ++ V + ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVVKELVENAIDAEAEEIHVLITDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREAADL---FALRTMGFRGEALASIAAVAEVELKTRPASEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G R ++ GSK G + G+ ++LF+N P RRK+++++ + L ++ R
Sbjct: 122 GTRLLIAGSKV--EGQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILTEFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALVHP+V+F + S D L +++ FG + L V+ N ++ISG
Sbjct: 179 IALVHPEVAFY---LYSNDTELFNLPVMPLRQRIMAVFGKKLNQQLLSVDVNTTMIKISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+++ P S A QY ++N RY+ HK + D+++
Sbjct: 236 FVAKPETSRKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE------------- 273
Query: 303 QACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
Q PA Y + + D+ P KT + F++ + + + A++ + K A
Sbjct: 274 QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGKFSAIP 333
Query: 358 SFDVDMLEDAELP-LESSR 375
+ D D + ++P E +R
Sbjct: 334 TIDFDTEDMPDIPAFEQAR 352
>gi|365154966|ref|ZP_09351362.1| DNA mismatch repair protein MutL [Bacillus smithii 7_3_47FAA]
gi|363628891|gb|EHL79592.1| DNA mismatch repair protein MutL [Bacillus smithii 7_3_47FAA]
Length = 631
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 219/481 (45%), Gaps = 49/481 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I +L + + N + +G V+ VV+ELV N++DA +T + + V ++VVD+
Sbjct: 1 MGKIIQLDDMLSNKIAAGEVVERPASVVKELVENAIDAHSTVIEIDVEEAGLQSIRVVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + ++ ERHATSK+ D +D I T GFRGEAL SI+ VS LE IT G
Sbjct: 61 GDGIEEEDVLTAFERHATSKI---KDENDLFRIRTLGFRGEALPSIASVSYLE-ITTGTG 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
R V++G K + RK GT V+ +LFYN P R KYM++ + L ++
Sbjct: 117 EGAATRAVLEGGKVVRKEKASARK--GTEVIVSNLFYNTPARLKYMKTIHTE-LGNITDT 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP VS + + LL T + +L + +G+ + ++A E
Sbjct: 174 VNRLALAHPDVSIQL--RHNGRVLLETNGNGDARQVLAAIYGLNTAKKMIPISARSIDFE 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I G+IS P + + + + IN RYV P+ K + + + L R
Sbjct: 232 IEGWISLPELTRASRNYISTIINGRYVKNYPLVKAIQ------------EGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P L+ ++ L D+ P K V + + + + I+ A+ K
Sbjct: 280 -----YPIALVMIQMDPLLVDVNVHPSKLEVRLSKEQELNELMMKTIQEAFRSKRL---- 330
Query: 360 DVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHM------FHKECERI-TFQE 412
+PLE++ + + T S L +L KQ + + H+ E T+++
Sbjct: 331 ---------IPLENAAPKWKKEKTVQQSFELDHLPKQTEPIIDTAVPIHRPPELTNTYEK 381
Query: 413 FQKDPVELAEENTEMEFFSQPKHSSSLL-DGSFAECLPIVPPKIDHRVWTIESSWFQDHQ 471
Q++ L E+ E E S+PK S + + E +V D + T ESS Q
Sbjct: 382 HQEEERHLPEDMLEQE-QSEPKSSPDFVREYDVQESETVVEAADDSSLETTESSQRQSRI 440
Query: 472 P 472
P
Sbjct: 441 P 441
>gi|322436381|ref|YP_004218593.1| DNA mismatch repair protein MutL [Granulicella tundricola MP5ACTX9]
gi|321164108|gb|ADW69813.1| DNA mismatch repair protein MutL [Granulicella tundricola MP5ACTX9]
Length = 659
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 176/384 (45%), Gaps = 50/384 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I L + V N + +G V+ VV+EL+ NS+DAGAT++ + V +++VD+
Sbjct: 1 MGRIRILSDQVANQIAAGEVVERPASVVKELLENSLDAGATRIRIEVEAGGRKLIRIVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ +D +L ERHATSKL DD I T GFRGEAL SI+ V+ L + T+A
Sbjct: 61 GHGMGKDDALLAFERHATSKL---RTSDDLLSIATLGFRGEALPSIASVARLSLETRAAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + G L ++D +GTT+ RDLF+N P RRK+++S ++ H +
Sbjct: 118 DDSGTHIEIAGGNILT--VEDAGLPIGTTIAIRDLFFNTPARRKFLKSESTELSH-IAAL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSP------------LALLISSFGIEDFSF 227
V AL H F+ + LL + +S AL+I + DF+
Sbjct: 175 VTHYALAHFNRHFEL--HSTTQALLVAPAVASAGDRLFQIFGRDTAALMIPTTAEMDFTR 232
Query: 228 ------------LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLL 275
LD + G L ISG++S P + YV++N R + +L+
Sbjct: 233 AGLPEPPPWKRELDYEAPDPGFLRISGFVSKPELQKLNRNSVYVFVNQRLIRD----RLV 288
Query: 276 NHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDW 335
H +++++ + P LL L P D+ P KT V F+
Sbjct: 289 LHA-----LTEAYR--------NIIPPSSFPVVLLFLEMPPHEVDVNVHPAKTEVRFRQP 335
Query: 336 EPVLAFIERAIRSAWMKKIAHDSF 359
V FI +R+ M+ SF
Sbjct: 336 AFVHDFIRDTVRTTLMQARPAASF 359
>gi|423367755|ref|ZP_17345187.1| DNA mismatch repair protein mutL [Bacillus cereus VD142]
gi|401083408|gb|EJP91666.1| DNA mismatch repair protein mutL [Bacillus cereus VD142]
Length = 381
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 172/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>gi|255690560|ref|ZP_05414235.1| DNA mismatch repair protein MutL [Bacteroides finegoldii DSM 17565]
gi|260624021|gb|EEX46892.1| DNA mismatch repair domain protein [Bacteroides finegoldii DSM
17565]
Length = 633
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 187/400 (46%), Gaps = 47/400 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ VV+ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVVKELVENAIDAEAQNIHVLVTDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + V+ GS + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKLVIAGSTV------ESQEAVSCSKGSNFSIKNLFFNVPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L S +++ FG + L + N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSE---LFNLPVSPLRQRIMAIFGKKLNQQLLNIEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ISGY++ P + A QY ++N RY+ HK +
Sbjct: 232 KISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV----------------------M 269
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ Q PA Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 270 EAYEQLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS--SPLK 391
A S D D + ++P S H +S +P K
Sbjct: 330 SAIPSIDFDTEDMPDIPAFEQSTSSEPPKVHYNSDYNPFK 369
>gi|283834788|ref|ZP_06354529.1| DNA mismatch repair protein MutL [Citrobacter youngae ATCC 29220]
gi|291069034|gb|EFE07143.1| DNA mismatch repair protein MutL [Citrobacter youngae ATCC 29220]
Length = 617
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 173/368 (47%), Gaps = 53/368 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ A +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IKKDELALALARHATSKI---ASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQPE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + + R
Sbjct: 120 AWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNH-IDEIIRR 177
Query: 183 IALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ D + E L C +S L + IE
Sbjct: 178 IALARFDVTINLSHNGKVVRQYRAVAADGQKERRLGAICGTS----FLEHALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLRGWVADPNHTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKI 354
S +++
Sbjct: 327 LSVLQQQL 334
>gi|406662984|ref|ZP_11071063.1| DNA mismatch repair protein mutL [Cecembia lonarensis LW9]
gi|405552998|gb|EKB48317.1| DNA mismatch repair protein mutL [Cecembia lonarensis LW9]
Length = 627
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 173/352 (49%), Gaps = 36/352 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+A+ N + +G V+ ++EL+ N++DAGAT+V V V ++V+D+G G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASALKELMENAIDAGATQVQVLVKEAGKMLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK + +D I TFGFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSMTDARMSFERHATSK---IRTSEDLFAIRTFGFRGEALASIAAVAQVEMRTREKDAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G ++GS D ++++ GT ++ ++LF+N P RR +++S+P ++ H V+
Sbjct: 122 GTLIQVEGS-------DVKKQEPVSCMEGTQILVKNLFFNVPARRNFLKSNPVEMRHLVE 174
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R+AL +P+V F +++ EL + +I FG L
Sbjct: 175 E-FQRVALAYPEVGFSL--KQNDMELFNLPAGGKLSQRIIGIFGKSYQGQLVVCQEETPH 231
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
L + GY+ P + + QY ++N+R++ +H H A+ A G +
Sbjct: 232 LNVKGYVGKPEQAKKTRGEQYFFVNNRFIKSNYLH----HAVAN--------AYEGLM-- 277
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
S P Y+L L + D+ P KT + F D V A + A++ A
Sbjct: 278 ---PSDMHPFYVLFLEIDPTHIDINVHPTKTEIKFDDERTVYAVVRSAVKQA 326
>gi|392396268|ref|YP_006432869.1| DNA mismatch repair protein MutL [Flexibacter litoralis DSM 6794]
gi|390527346|gb|AFM03076.1| DNA mismatch repair protein MutL [Flexibacter litoralis DSM 6794]
Length = 704
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 172/351 (49%), Gaps = 29/351 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDD 59
+ I LPE++ N + +G V+ VV+E++ NSVDA AT + V ++V+D+
Sbjct: 2 LDIIRLLPESLANQIAAGEVVQRPASVVKEMLENSVDAEATTIELVLKDAGKILIQVIDN 61
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + ERHATSK+ + DD I TFGFRGEA+AS++ V+ +E+ TK
Sbjct: 62 GKGMSETDARMCFERHATSKI---IEPDDLYNILTFGFRGEAMASVAAVAQVELRTKQED 118
Query: 120 RPNGYRKVMKGSKC-LYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
+ G ++GS+ + I ++ GT++ ++LF+N P RRK+++S+ ++ H + +
Sbjct: 119 QEIGTFIYIEGSEVKKHEPIATQK---GTSLAVKNLFFNTPARRKFLKSNSVELRH-ITQ 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
R+AL +P ++F M + + +++ FG S L + +
Sbjct: 175 EFERVALANPHINF---SMHHNGQEIYNLREGKLARRIVAMFGKSYQSNLLTCQEDVETI 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++ GY+ P + K QY ++N+R++ G +H + A G L
Sbjct: 232 KLLGYVGKPQAAKKTKGSQYFFVNNRFIKSGYLHHAV------------MTAYEGLL--- 276
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
A P Y+L + D+ P KT + F D V ++ A++ A
Sbjct: 277 --PKDAHPFYVLFIEIDPKKIDINVHPTKTEIKFDDERTVYVVVQSAVKQA 325
>gi|338210342|ref|YP_004654391.1| DNA mismatch repair protein mutL [Runella slithyformis DSM 19594]
gi|336304157|gb|AEI47259.1| DNA mismatch repair protein mutL [Runella slithyformis DSM 19594]
Length = 629
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 208/450 (46%), Gaps = 52/450 (11%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
I LP+A+ N + +G V+ VV+EL+ NS+DA A + V + ++++DDG
Sbjct: 4 VIRLLPDAIANQIAAGEVVQRPASVVKELLENSIDAQAKNIQVIIRDAGRTLIQIIDDGG 63
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+S + ERHATSK+ H DD I T GFRGEALASI+ V+ +E+ T+
Sbjct: 64 GMSETDARMSFERHATSKIRH---ADDLFRIRTMGFRGEALASIAAVAQIEMRTRRPSDE 120
Query: 122 NGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G M+GS+ ++ V GT ++ ++LF+N P RR +++++ ++ H +
Sbjct: 121 IGILLRMEGSEL------KSQESVACLPGTNILVKNLFFNVPARRNFLKTNSVEMRHILD 174
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R+AL HP++SF ++E L + S ++ FG L +
Sbjct: 175 E-FQRVALAHPEISFSLYHNDTEVYNLYSGKLSR---RIVDMFGKNYREQLIQCQEETPY 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLK 296
+ + G++ P + + Q+ ++N RYV H L+H + A+++ + S ++
Sbjct: 231 VTVKGFVGKPDFARKTRGEQFFFVNDRYVK----HNYLHHAVLAAYEATISEGSH----- 281
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
P Y+L L S D+ P KT + F D V A + AIR A I H
Sbjct: 282 ---------PFYVLMLDIDPSHIDINIHPTKTEIKFDDERSVYALLMAAIRKAI--SINH 330
Query: 357 DSFDVDMLEDAELPLESSRFQSHQSSTHLHS-------------SPLKNLAKQRDHMFHK 403
S +D + S + ++T S PL + ++ ++ H
Sbjct: 331 LSHSIDFEANVNFLNPMSGLGNRSAATTGTSPKPQSVNWDLPSHPPLPSSRREETNLSHW 390
Query: 404 ECERITFQEFQKDPVELAEENTEMEFFSQP 433
E FQ+ + PV+ + E E FS+P
Sbjct: 391 EKLFDGFQKPEPAPVQATLDLRETEDFSEP 420
>gi|423301606|ref|ZP_17279629.1| DNA mismatch repair protein mutL [Bacteroides finegoldii
CL09T03C10]
gi|408471599|gb|EKJ90130.1| DNA mismatch repair protein mutL [Bacteroides finegoldii
CL09T03C10]
Length = 633
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 187/400 (46%), Gaps = 47/400 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ VV+ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVVKELVENAIDAEAQNIHVLVTDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRPESEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + V+ GS + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKLVIAGSTV------ESQETVSCSKGSNFSIKNLFFNVPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F +SE L S +++ FG + L + N +
Sbjct: 175 EFERIALVHPEVAFSLYSNDSE---LFNLPVSPLRQRIMAIFGKKLNQQLLNIEVNTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ISGY++ P + A QY ++N RY+ HK +
Sbjct: 232 KISGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV----------------------M 269
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ Q PA Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 270 EAYEQLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHS--SPLK 391
A S D D + ++P S H +S +P K
Sbjct: 330 SAIPSIDFDTEDMPDIPAFEQSTSSEPPKVHYNSDYNPFK 369
>gi|332291112|ref|YP_004429721.1| DNA mismatch repair protein MutL [Krokinobacter sp. 4H-3-7-5]
gi|332169198|gb|AEE18453.1| DNA mismatch repair protein MutL [Krokinobacter sp. 4H-3-7-5]
Length = 624
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 170/346 (49%), Gaps = 29/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGA+ + + V ++++DDG G
Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASTIKLIVKDAGKTLIQIIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ DD + T GFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSDTDARMSFERHATSKI---TTADDLFNLNTKGFRGEALASIAAVAHVELKTRPEGAEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G R ++GSK + K GT++ ++LF+N P RR +++S+ ++ H + + R
Sbjct: 122 GTRIEIEGSKINAQEVCATPK--GTSLSVKNLFFNIPARRNFLKSNSVELRHVIDEF-QR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
++L HP ++F E E L + +++ FG + L V L I G
Sbjct: 179 VSLAHPDIAFAMYHNEGE---LFQLPQGNLKQRIVAIFGGKTNEKLVPVQEETDILTIDG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKRSK 301
++ P S + Q+ ++N R++ LNH + A+FD G L
Sbjct: 236 FVVKPEFSKKTRGEQFFFVNDRFIKSA----YLNHAVTAAFD---------GLL-----P 277
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+A +Y L L+ S D+ P KT + F D + A + I+
Sbjct: 278 ERARASYFLYLKVDPSTIDINIHPTKTEIKFDDEHALYAMLRSTIK 323
>gi|307132706|ref|YP_003884722.1| methyl-directed mismatch repair protein [Dickeya dadantii 3937]
gi|306530235|gb|ADN00166.1| methyl-directed mismatch repair protein [Dickeya dadantii 3937]
Length = 646
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 170/349 (48%), Gaps = 32/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + L L RHATSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKADLALALARHATSKI---ATLDDLEAIVSLGFRGEALASISSVSRLTLTSRTDAQEE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK++++ + +H + + V R
Sbjct: 120 AWQAYAEGRE-MAVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFMH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGAL 238
IAL V+ I + +L+ + S A G I +FL V+ G L
Sbjct: 178 IALARFDVA---ITLHHNGKLIRQYRAVSDPAQRERRLGSICGAAFLQHALAVSWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S + QY Y+N R + +L+NH +
Sbjct: 235 NIHGWVADPAGSRQLPEMQYCYVNQRMMRD----RLINH-----------AIRQAYQDQL 279
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
R + Q PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 280 RDEQQ--PAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|365135103|ref|ZP_09343628.1| DNA mismatch repair protein MutL [Subdoligranulum sp. 4_3_54A2FAA]
gi|363613073|gb|EHL64597.1| DNA mismatch repair protein MutL [Subdoligranulum sp. 4_3_54A2FAA]
Length = 695
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 175/353 (49%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I+ L + + +G V+ VV+EL N++DAGAT V V V G+ +++
Sbjct: 1 MAVIHVLDKHTAELIAAGEVVERPASVVKELTENAIDAGATAVSVSVERGGIA--MIQIA 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI + + RHATSK+ D++ I T GFRGEALAS++ VS +E++TK
Sbjct: 59 DNGCGIEAEYIPTAFIRHATSKIEKEEDLES---IHTLGFRGEALASVASVSRIELLTKT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
Y + G + GI+ + VGTT+ RDLFYN P R K+++ + + V
Sbjct: 116 DADEYAYLYRISGGE--EQGIEPAARPVGTTITVRDLFYNTPARMKFLKKDTSE-GNYVA 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGI--EDFSF-LDEVNAN 234
V ++AL HP+VSFKF+ + + + LL +++ + DF+ L V
Sbjct: 173 DVVTQLALSHPEVSFKFV-RDGKPQFQTPGDGK----LLGAAYAVLSRDFAKDLVPVEHT 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
G+ + G ++ P + + +A QY +IN R+V ++ L A++
Sbjct: 228 AGSYTVRGLVTPPKSARASRAMQYFFINGRFVKN---RTMMAALEAAY--------KGVM 276
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
++GK P +L++ P L D+ P KT V F + V + ++++
Sbjct: 277 MQGK------FPGCVLSIEMPPQLVDVNVHPAKTEVRFAREKDVFDAVYQSVK 323
>gi|225027642|ref|ZP_03716834.1| hypothetical protein EUBHAL_01901 [Eubacterium hallii DSM 3353]
gi|224954956|gb|EEG36165.1| DNA mismatch repair domain protein [Eubacterium hallii DSM 3353]
Length = 731
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 202/408 (49%), Gaps = 35/408 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I L ++ N + +G V+ + +V+ELV N+VDA +T V V + G ++++ D+
Sbjct: 1 MPEIRVLDQSTINQIAAGEVVERPSSIVKELVENAVDANSTAVTVEIKGGGIDFIRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI ++ + HATSK+ +D++ + GFRGEAL+SI+ V+ +E++TK
Sbjct: 61 GCGIEKEQVRKAFLPHATSKIRSASDLETVV---SLGFRGEALSSIASVAKVELVTKTDE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G R V++G + D+ GTT + R+LF+N P RRK+++S + + V+
Sbjct: 118 GISGIRYVIEGGE--EKSYDEIGCPEGTTFIIRNLFFNTPARRKFLKSKMTEAGY-VESF 174
Query: 180 VLRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
+ R+AL HP +SFKFI D +++ + T + + ++ + FG + L V N+ +
Sbjct: 175 IQRLALSHPDISFKFICDNKNK---ISTSGNGNLKDVIYNIFGRDVAMNLLPVKGNENGI 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ GYI P S + ++ ++N RY+ I K + + +K +
Sbjct: 232 LVDGYIGKPVISRGNRNYENYFVNGRYLKNNIISKAI---------EEGYKGH------- 275
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK----- 353
+ P L + +D P K + F++ E + + + A+RS+++KK
Sbjct: 276 -AMVHKFPFTALMISMDPHCFDANVHPAKMEMRFRNAEELYSSVMSAVRSSFVKKELIPK 334
Query: 354 --IAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDH 399
I +D + + ++ P E R + + L ++ + K+++
Sbjct: 335 VGIGNDKKEKESVKKIPEPFERKRRAIEERFSSLSQEKIREIEKRKEQ 382
Score = 44.7 bits (104), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 30/203 (14%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
+++ QV + + V L +DQHAA E++ E+L+ + E ++ Q++V P
Sbjct: 544 RIIGQVFRTYWLVEFDEKLFFVDQHAAHEKVMYEKLKKDL---ENNTIV-----QQMVAP 595
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV--NL 1284
+ + F+ + + IC SF K L L + CI GV NL
Sbjct: 596 PV----ILTFSIKEQQKFKIC------EESF-KKLGFLIEEFGGNEY----CIRGVPANL 640
Query: 1285 SDVD----LLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEEL 1340
+D +E Q+ + G R L + AC+ A+ ++ E ++++L
Sbjct: 641 LGIDPQELFIEIFDQIEENSGKMNLEMITDR-LATMACKAAVKGNTAMSYQEMDALMDQL 699
Query: 1341 KQTSLCFQCAHGRPTTVPLVNLE 1363
+ +QC HGRPT + + E
Sbjct: 700 MKLDNPYQCPHGRPTIISMTKYE 722
>gi|170728497|ref|YP_001762523.1| DNA mismatch repair protein [Shewanella woodyi ATCC 51908]
gi|238688669|sp|B1KHV0.1|MUTL_SHEWM RecName: Full=DNA mismatch repair protein MutL
gi|169813844|gb|ACA88428.1| DNA mismatch repair protein MutL [Shewanella woodyi ATCC 51908]
Length = 614
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 175/353 (49%), Gaps = 27/353 (7%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI L + N + +G V+ V++ELV NS+DAGAT+V + + +K+ D+GS
Sbjct: 2 TIQILSPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIDKGGSKLIKIQDNGS 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI + L L RHATSKL L D+D I +FGFRGEALASIS VS L + ++ +
Sbjct: 62 GIPKSELNLALSRHATSKLSTLDDLD---AILSFGFRGEALASISSVSRLTLTSRTAEQT 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ +GS + + + VGTT+ + DLF+N P RR++++S + H + + +
Sbjct: 119 EAWQAYAEGSD-MAVKVIPAAHPVGTTIEAVDLFFNTPARRRFLKSDKTEFTH-IDEWLK 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFS-FLDEVNANDGALEI 240
RIALV P++ F + ++ + ++ ++F+ E++ L +
Sbjct: 177 RIALVKPEIHFTLKHNGKQVRNYRPANNQDQYLMRLAQICGKNFAEQAIEIDCQHEGLTL 236
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SGYI SP+ + Q+ Y+N R + +L+NH F
Sbjct: 237 SGYIQSPFFTSPASDTQFFYVNGRLIRD----RLVNH-----------AVRQAF---SEH 278
Query: 301 KSQACPAYLLNLR-CPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
+ +Y+L L PH + D+ P K V F V +I +A++SA M+
Sbjct: 279 GTGELASYVLMLEIAPHQV-DVNVHPAKHEVRFHQSRYVHDYILQALQSALMQ 330
>gi|373106357|ref|ZP_09520660.1| DNA mismatch repair protein MutL [Stomatobaculum longum]
gi|371652732|gb|EHO18140.1| DNA mismatch repair protein MutL [Stomatobaculum longum]
Length = 651
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 170/353 (48%), Gaps = 30/353 (8%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVVDD 59
+I L E+ N + +G V+ +V+EL N++DA A+ + + + G+ ++V D+
Sbjct: 2 SIQLLDESTINKIAAGEVIERPASIVKELAENAIDADASVITIEIRDGGIA--MIRVTDN 59
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI+ D + RHATSK+ +D + + GFRGEALASI+ V+ +E+ITK
Sbjct: 60 GSGIAADEVPTAFLRHATSKI---RTAEDIYHVQSLGFRGEALASIAAVARIELITKRRD 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R +G + L ++ GTTV++RDLF+N PVRR +++++ + H V
Sbjct: 117 ALTGVRYTAEGGQQTAL--EEIGAPAGTTVIARDLFFNTPVRRGFLKAAVTETAH-VAAL 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+AL HP+VS +F + + T + ++ +G E + L V + L
Sbjct: 174 AEELALSHPEVSIRF--LANGQSRFHTSGNREVKDIIYQLYGREIATKLLPVEREEKGLS 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ G+I P S +A ++ IN RY+ K P+ S +G+ G R
Sbjct: 232 VHGFIGRPEISRGSRALEHYCINGRYI-KSPLL--------------SKAIEDGY--GDR 274
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P +L L + D+ P K V F D + + F+ A+ A +
Sbjct: 275 MMQHNFPFAVLFLTTKPEVVDVNVHPTKREVRFSDGQALYLFLRAAVEEALQR 327
>gi|429729020|ref|ZP_19263708.1| DNA mismatch repair protein [Peptostreptococcus anaerobius VPI
4330]
gi|429146169|gb|EKX89229.1| DNA mismatch repair protein [Peptostreptococcus anaerobius VPI
4330]
Length = 627
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 175/353 (49%), Gaps = 26/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M IN L ++ N + +G V+ + +++ELV NS+DAG++ + + + ++++D+
Sbjct: 1 MAKINILDDSTINKIAAGEVVERPSSIIKELVENSIDAGSSYISIEIENGGKGLIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI +D + RHATSK+ + D+ + + + GFRGEALASI+ VS LE++TK
Sbjct: 61 GSGIDKDDVNKAFLRHATSKINTVEDL---SSLESLGFRGEALASIAAVSKLEMLTKTEE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R V+ G K + + GT + RDLF+N P RRK+++S+ + ++
Sbjct: 118 ALIGLRIVLDGGKIREK--EATSANRGTQISVRDLFFNTPARRKFLKSNQAEA-QAITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V +IA+ +P + K+I+ + + T S + + +G + L E++
Sbjct: 175 VNKIAIGNPSIKIKYIN--NSKTIYETLGDGSIINAIRMIYGRDISENLIEIDYRSKYFS 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISGY+ + + Q++YIN RY+ I K +N D++KA K
Sbjct: 233 ISGYLGNNNIYRGNRNHQHLYINGRYIKSPNISKKIN---------DAYKAIIPINK--- 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P Y +N+ + D+ P K V F E +L + +R +K
Sbjct: 281 -----YPIYFVNISVDPAKVDVNIHPSKLEVKFDQEEEILNELSDFVRGILLK 328
Score = 44.7 bits (104), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 34/186 (18%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIK--- 1241
+ ++DQHAA ERIR E K + D ++++ I L N + ++
Sbjct: 460 MIMLDQHAAHERIRFEMYMSKYKAN--------DISVQMLIDPIIMDLDANDMDTVRKNI 511
Query: 1242 ----DWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLA 1297
+G++ + G RS I++ +P FG S + E + L
Sbjct: 512 DVFSSFGFL--VEEFGHRS--------------ISIRGLPNTFGEPESKRFIYELIDGLG 555
Query: 1298 DTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1357
D T + + AC+ AI D + E ++ +L++ S + C HGRPT V
Sbjct: 556 KIDNIYDTKYDEIAEI---ACKSAIKGNDKISIEEAKHLIGQLEECSNPYTCPHGRPTMV 612
Query: 1358 PLVNLE 1363
+ E
Sbjct: 613 KMTRYE 618
>gi|251788130|ref|YP_003002851.1| DNA mismatch repair protein [Dickeya zeae Ech1591]
gi|247536751|gb|ACT05372.1| DNA mismatch repair protein MutL [Dickeya zeae Ech1591]
Length = 649
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 170/349 (48%), Gaps = 32/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + L L RHATSK+ A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKADLALALARHATSKI---ATLDDLEAIVSLGFRGEALASISSVSRLTLTSRTEAQAE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK++++ + +H + + V R
Sbjct: 120 AWQAYAEGRE-MAVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFMH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGAL 238
IAL V+ I + +L+ + S A G I +FL V+ G L
Sbjct: 178 IALARFDVA---ITLHHNGKLIRQYRAVSEPAQRERRLGSICGAAFLQHALAVSWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S + QY Y+N R + +L+NH +
Sbjct: 235 NIHGWVADPVGSRQLPEMQYCYVNQRMMRD----RLINH-----------AIRQAYQDQL 279
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
R + Q PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 280 RDEQQ--PAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|373461480|ref|ZP_09553220.1| DNA mismatch repair protein MutL [Prevotella maculosa OT 289]
gi|371952438|gb|EHO70277.1| DNA mismatch repair protein MutL [Prevotella maculosa OT 289]
Length = 610
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 167/347 (48%), Gaps = 27/347 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV N+VDAGA + V V ++V+DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENAVDAGAKNIRVQVIDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK + DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSK---IRKADDLFALHTMGFRGEALASIAAVAQVELRTRQEKDEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + + GS+ + G + VG+ +LFYN P RRK+++S+ + L+++ R
Sbjct: 122 GTQLFIAGSR--FTGQEPCSCPVGSNFSINNLFYNVPARRKFLKSNATE-LNNIIAAFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+P ++F + S L + +I FG L +V + I+G
Sbjct: 179 IALVYPDIAF---SLHSNGTELFNLKAGLLRQRIIDIFGKRLNQDLLQVKVDTTMCRING 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
Y+ P + A QY ++N RY+ HK + N F + S
Sbjct: 236 YVGKPQSARKKGAHQYFFVNGRYMKHPYFHKAV---------------TNAFERLVPSGE 280
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
Q P +L P + D+ P KT + F++ P+ + A++ A
Sbjct: 281 Q-IPYFLYFEVAPEDI-DVNIHPTKTEIKFENEVPIWQVLSAAVKEA 325
>gi|406026844|ref|YP_006725676.1| DNA mismatch repair protein mutL [Lactobacillus buchneri CD034]
gi|405125333|gb|AFS00094.1| DNA mismatch repair protein mutL [Lactobacillus buchneri CD034]
Length = 643
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 182/376 (48%), Gaps = 42/376 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
+ I++LP + N + +G V+ VV+ELV NS+DA ++++ V V +KVVDD
Sbjct: 4 LNEIHKLPTILSNQIAAGEVVERPASVVKELVENSIDAKSSEIDVTVENSGLKLIKVVDD 63
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G+GI + RHATSK +++ D + T GFRGEAL SIS V+ + + T
Sbjct: 64 GNGIDSSQVQTAFLRHATSK---ISEQRDLFRVRTLGFRGEALPSISSVANVRMKTSTGS 120
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G KG K + + RK GTTV LFYN P R KY+ SSP L +
Sbjct: 121 I--GTEVEYKGGKLVTQKASESRK--GTTVEVASLFYNTPARLKYL-SSPNTELSKISDI 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP+++F FI + ELL T +L + +G++ S + + ND ++
Sbjct: 176 VNRLALSHPEIAFSFI--SNGRELLRTSGRGDLRQVLGAIYGVKTVSKMAAIKGNDLDIK 233
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGY+S P + S + + + +N R++ P+ K + A + G +
Sbjct: 234 VSGYVSLPELTRSSRNYISLILNGRFIRNFPLTK---AVIAGY--------------GSK 276
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P ++ + +L D+ P K V D EP++ K IA+ +
Sbjct: 277 LMIGRFPIAVIKIDADPALIDVNVHPTKQEVRISD-EPMIG-----------KLIANAIY 324
Query: 360 DVDMLEDAELPLESSR 375
DML D +L +++R
Sbjct: 325 --DMLRDKQLIPDATR 338
>gi|51892886|ref|YP_075577.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
gi|81826108|sp|Q67NL0.1|MUTL_SYMTH RecName: Full=DNA mismatch repair protein MutL
gi|51856575|dbj|BAD40733.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
Length = 635
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 28/351 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I L E N + +G V+ VV+ELV N++DA A ++ V V G V+V DD
Sbjct: 1 MARIRLLDERTANQIAAGEVVERPASVVKELVENALDAQAKRIVVEVSGGGRELVRVTDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ + L +RHATSK+ D++ I T GFRGEAL SI+ VS E+IT+ H
Sbjct: 61 GIGMVPEDARLALQRHATSKIRTAEDLN---AITTLGFRGEALPSIAAVSQFELITRPHD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ GYR + +G + + G + GT V RDLF+N P R KY++++ + L +
Sbjct: 118 QLAGYRILAEGGQIVAEG--EHGCPAGTRVTVRDLFFNVPARLKYLKTNATE-LAQIGDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL +P+V+F+F + ++ T + A + + G E L V+ + A
Sbjct: 175 LTRLALANPEVAFRF--QSGQAQVFATPGTGDLTAAVAALLGREMAKELLPVDYRNDAAR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ G++ P + + ++ QY ++N R V +AA + +++ L R
Sbjct: 233 VHGFVGRPTIARAGRSHQYFFVNRRAV---------RTIAARYALEEAYAH---LLPNGR 280
Query: 300 SKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P +L + PH + D+ P K V F+ V A + +A R A
Sbjct: 281 -----YPVCILFIEVEPHEV-DVNVHPTKAEVRFQRDREVRAAVYQAARHA 325
>gi|291528991|emb|CBK94577.1| DNA mismatch repair protein MutL [Eubacterium rectale M104/1]
Length = 648
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 156/288 (54%), Gaps = 19/288 (6%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ VV+ELV N++DAG+T + V + G+ ++++
Sbjct: 1 MPNIAILNQETIDKIAAGEVVERPCSVVKELVENAIDAGSTAITVEIKEGGIS--FIRIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI RD + + RH+TSK+ +D + + GFRGEAL+SIS V+ +E+ITK
Sbjct: 59 DNGCGIERDQVAVAFYRHSTSKI---RSAEDLLTVKSLGFRGEALSSISAVARVELITKT 115
Query: 118 HGRPNGYRKVMKGSKCLY---LGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
+ G R V++GSK L +G D GTT + +DLFYN P RRK+++++ + +
Sbjct: 116 YDELTGTRYVIEGSKELSNEEIGAPD-----GTTFIVKDLFYNVPARRKFLKTAQTEGSY 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ V ++AL HP +SFKFI+ + L T + + ++ FG E S L EV
Sbjct: 171 -ISDMVEKLALSHPDISFKFIN--NNQTKLHTSGNGNRKDIIYHIFGREISSSLLEVKHE 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 282
++ G+I P + + ++ +IN RYV + + + SF
Sbjct: 228 CEYFKVEGFIGKPVITRGNRNYENYFINGRYVKSNILSRAIEEAYKSF 275
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS---- 1213
+ +S + ++ Q+ K + + L +IDQHAA E++ E+ ++ + + S
Sbjct: 452 LTESAKKQFSIIGQLFKTYWLIEFEDKLYIIDQHAAHEKVLYEKTMARLANKDFTSQRIS 511
Query: 1214 ---VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV 1270
V LDA + ++L+ + QI+ +G+ + G + +
Sbjct: 512 PPIVMTLDARES--------EMLEKYRPQIEQFGY--EVEHFGGKEY------------- 548
Query: 1271 ITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLL 1329
+ A+P +F +++ D+ +E L ++ G T P + + S +C+ A+ D L
Sbjct: 549 -MISAIPDNLFNIDMKDL-FIEMLDDFSNATGRQT-PDIITEKVASMSCKAAVKGNDKLT 605
Query: 1330 PSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
E +++EL + C HGRPT + + E
Sbjct: 606 LPEINKLIDELLSLDNPYNCPHGRPTIISMSKYE 639
>gi|325680314|ref|ZP_08159874.1| DNA mismatch repair protein, C-terminal domain protein
[Ruminococcus albus 8]
gi|324108023|gb|EGC02279.1| DNA mismatch repair protein, C-terminal domain protein
[Ruminococcus albus 8]
Length = 713
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 177/362 (48%), Gaps = 38/362 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I L V + +G V+ VV+EL+ N++DAGAT + V + Y++V D+
Sbjct: 1 MSEIRVLSREVSELIAAGEVIDRPASVVKELLENAIDAGATNITVEIKNGGRTYMRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D L RHATSK+ D+D I T GFRGEALASI V+ ++++TK
Sbjct: 61 GKGIAPDDLPTAFLRHATSKISQKDDLD---SIMTLGFRGEALASICAVAKVDVLTKRKD 117
Query: 120 RPNGYRKVMKGS------KCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
G ++G+ +C G D GTT V RD+FYN P R K+++ +
Sbjct: 118 DSYGTHYAIEGAEEKTSEQC---GCPD-----GTTFVVRDIFYNVPARLKFLKKDSSEAN 169
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
H V V ++ L HP +SFK I +++ ELL T + + S +G E + L EV+
Sbjct: 170 H-VADLVTKLTLSHPDISFKLI-RDNKTELL-TAGDGKIYSAVYSVYGREFANSLIEVDY 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+ + G+ P ++ + FQ ++N R+V A + ++++ N
Sbjct: 227 TWQGIHVHGHAVKPLEAKLNRKFQNFFVNGRFV---------KSKACAAALEEAYR--NN 275
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ GK PA +L + P + D+ P K V F D + + + A+++A M++
Sbjct: 276 IMVGK------FPACVLYIDVPPNTVDVNVHPTKIEVRFSDEKLMHEAVYFAVKNALMER 329
Query: 354 IA 355
A
Sbjct: 330 DA 331
>gi|417301184|ref|ZP_12088353.1| DNA mismatch repair protein MutL [Rhodopirellula baltica WH47]
gi|327542505|gb|EGF28980.1| DNA mismatch repair protein MutL [Rhodopirellula baltica WH47]
Length = 705
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 173/350 (49%), Gaps = 28/350 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I +LP + N + +G V+ VV+EL+ NS+DAG+T++ + + G +++ DDG G
Sbjct: 15 IRQLPAHLVNQIAAGEVIERPASVVKELLENSIDAGSTRIELSLEGGGVELIRISDDGCG 74
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ + L L HATSKL D + +GT GFRGEALASI+ VS + I ++A G+
Sbjct: 75 MTAEQLPLAVTSHATSKL---PDDESLFHVGTLGFRGEALASIASVSQMTIRSRAEGQDG 131
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + ++G G VGT + R+LF+N PVRRK+++ +P+ + + R
Sbjct: 132 GCQIDIRGGVIETPGPCG--CPVGTVIEVRNLFFNTPVRRKFLK-TPQTERGHIVEAFTR 188
Query: 183 IALVHPKVSFKFIDMESED-ELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
+AL +PKV F + + E +LL T + + S FG E L + D ++I+
Sbjct: 189 LALANPKVHFVLRNGDKEMFDLLPTTRWADRIE---SFFGTEISEALIPIENQDETVQIT 245
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
GY P S QY+++N R++ + L H +A G L R
Sbjct: 246 GYACDPSVSRGNNRMQYLFLNGRHIRD----RALQHALG--------EAYRGMLMVGRH- 292
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
P L +R P + D+ P K V F D V + + + +R ++
Sbjct: 293 ----PVCFLRMRMPADMIDVNVHPAKLEVRFTDSGRVYSRLLQTLRQRFL 338
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 19/189 (10%)
Query: 1171 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1230
QV ++++ + VIDQHA ER+ E + KVL + A L+A+Q LV +
Sbjct: 510 QVHQRYLVTQDEKGMVVIDQHALHERVLYERICQKVLHED----ASLEAQQLLVPEPVSL 565
Query: 1231 QLLQNFAE-QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1289
+ A ++KD + + F L+Q + P + N D+
Sbjct: 566 TPAERAAALEVKDTLSRIGLEIE---DFGGETILIQ---------SYPAML-PNKPPADM 612
Query: 1290 LEFLQQLADTDGSSTTPPSVLR-VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQ 1348
L + + G P +L +L++ AC+ A+ GD L P E ++E+
Sbjct: 613 LRTVLESVMGAGRDPNPKDLLNHLLSTVACKAAVKAGDPLSPEEITSLLEQKDLYQETHH 672
Query: 1349 CAHGRPTTV 1357
C HGRPT +
Sbjct: 673 CPHGRPTAL 681
>gi|365875822|ref|ZP_09415347.1| DNA mismatch repair protein mutl [Elizabethkingia anophelis Ag1]
gi|442587583|ref|ZP_21006399.1| DNA mismatch repair protein [Elizabethkingia anophelis R26]
gi|365756334|gb|EHM98248.1| DNA mismatch repair protein mutl [Elizabethkingia anophelis Ag1]
gi|442562754|gb|ELR79973.1| DNA mismatch repair protein [Elizabethkingia anophelis R26]
Length = 591
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 173/351 (49%), Gaps = 35/351 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ +V+EL+ N++DAGAT + + V V+VVD+GSG
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPASIVKELLENAIDAGATSIELIVKDGGRTLVQVVDNGSG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK + +D I T GFRGEALASI+ V+ +++ TK
Sbjct: 65 MSATDARLAFERHATSK---IRTTEDIFRIATKGFRGEALASIAAVAQVDLKTKQADTSY 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G ++ G + + E++ V G+ ++LFYN P RRK+++S ++ H + +
Sbjct: 122 GTHIMIHGGELI------EQEPVQSTDGSNFAVKNLFYNVPARRKFLKSDNVEIRHIMDE 175
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
R+AL HP + F + +SE + S+ L ++ FG S L + +
Sbjct: 176 F-QRVALAHPGLEFSLYNNDSE---VFRLRKSTELQRIVDIFGRRLHSLLVPIKEETDWV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+SGY+ P + + Q+ ++N RY K P +L+ + +A G L
Sbjct: 232 RLSGYVGKPEAARKNRGEQFFFVNGRY-FKSP------YLSRAVQ-----EAFEGLL--- 276
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
+ Q P+Y L L D+ P KT V F+D + A + +I+ +
Sbjct: 277 --QPQYIPSYFLFLEIDPEKIDVNIHPQKTEVKFEDENVIFAMLRSSIKRS 325
>gi|257094379|ref|YP_003168020.1| DNA mismatch repair protein MutL [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046903|gb|ACV36091.1| DNA mismatch repair protein MutL [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 615
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 175/358 (48%), Gaps = 34/358 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP+ + + + +G V+ V++EL+ N++DAG++ + + + ++V DDG G
Sbjct: 7 IALLPDLLISQIAAGEVVDRPASVLKELLENALDAGSSTIQIQLEEGGVKLLRVSDDGGG 66
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK--AHGR 120
++RD L L RHATSK+ LAD++ +GT GFRGEALAS++ V+ L + ++ + R
Sbjct: 67 MARDELALALTRHATSKINSLADLER---VGTLGFRGEALASVAAVARLTLTSRQASSDR 123
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
G + + + G GT V RDL+YN P RRK+++S + H + V
Sbjct: 124 AAG-QHAWRLTDEPGAGPQPAALQAGTVVEMRDLYYNTPARRKFLKSEGSEFAHCA-EAV 181
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNANDGA 237
RIAL HP V+F + + S+S + + G E FL E ++ + G
Sbjct: 182 KRIALAHPGVAFT---LSHNGRVALHLSASDSRVRVGAILGDE---FLAESRCLDVSAGP 235
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
L ++GY + P S + QY Y+N R+V KLL H +A L G
Sbjct: 236 LRVAGYCALPAYSRARGDAQYCYVNGRFVRD----KLLGHAL--------RQAYQDLLHG 283
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
R PAY L L + D+ P KT V F+D V F+ A++ +A
Sbjct: 284 SR-----YPAYCLFLDIDPAGVDVNVHPQKTEVRFRDARAVHQFVFHAVQRLLASPLA 336
>gi|238924111|ref|YP_002937627.1| DNA mismatch repair enzyme (putative ATPase) [Eubacterium rectale
ATCC 33656]
gi|259509932|sp|C4ZA52.1|MUTL_EUBR3 RecName: Full=DNA mismatch repair protein MutL
gi|238875786|gb|ACR75493.1| DNA mismatch repair enzyme (predicted ATPase) [Eubacterium rectale
ATCC 33656]
Length = 648
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 156/288 (54%), Gaps = 19/288 (6%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ VV+ELV N++DAG+T + V + G+ ++++
Sbjct: 1 MPNIAILNQETIDKIAAGEVVERPCSVVKELVENAIDAGSTAITVEIKEGGIS--FIRIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI RD + + RH+TSK+ +D + + GFRGEAL+SIS V+ +E+ITK
Sbjct: 59 DNGCGIERDQVAVAFYRHSTSKI---RSAEDLLTVKSLGFRGEALSSISAVARVELITKT 115
Query: 118 HGRPNGYRKVMKGSKCLY---LGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
+ G R V++GSK L +G D GTT + +DLFYN P RRK+++++ + +
Sbjct: 116 YDELTGTRYVIEGSKELSNEEIGAPD-----GTTFIVKDLFYNVPARRKFLKTAQTEGSY 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ V ++AL HP +SFKFI+ + L T + + ++ FG E S L EV
Sbjct: 171 -ISDMVEKLALSHPDISFKFIN--NNQTKLHTSGNGNRKDIIYHIFGREISSSLLEVKHE 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 282
++ G+I P + + ++ +IN RYV + + + SF
Sbjct: 228 CEYFKVEGFIGKPVITRGNRNYENYFINGRYVKSNILSRAIEEAYKSF 275
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS---- 1213
+ +S + ++ Q+ K + + L +IDQHAA E++ E+ ++ + + S
Sbjct: 452 LTESAKKQFSIIGQLFKTYWLIEFEDKLYIIDQHAAHEKVLYEKTMARLANKDFTSQRIS 511
Query: 1214 ---VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV 1270
V LDA + ++L+ + QI+ +G+ + G + +
Sbjct: 512 PPIVMTLDARE--------CEMLEKYRPQIEQFGY--EVEHFGGKEY------------- 548
Query: 1271 ITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLL 1329
+ A+P +F +++ D+ +E L ++ G T P + + S +C+ A+ D L
Sbjct: 549 -MISAIPDNLFNIDMKDL-FIEMLDDFSNATGRQT-PDIITEKVASMSCKAAVKGNDKLT 605
Query: 1330 PSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
E +++EL + C HGRPT + + E
Sbjct: 606 LPEINKLIDELLSLDNPYNCPHGRPTIISMSKYE 639
>gi|163749345|ref|ZP_02156594.1| DNA mismatch repair protein MutL [Shewanella benthica KT99]
gi|161331064|gb|EDQ01990.1| DNA mismatch repair protein MutL [Shewanella benthica KT99]
Length = 616
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 172/358 (48%), Gaps = 43/358 (12%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ V++ELV NS+DAGAT+V + + +K+ DDG+
Sbjct: 2 TIQILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIKIHDDGT 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI ++ L L RHATSKL L D+D I +FGFRGEALASIS VS L + ++ +
Sbjct: 62 GIPKEELSLALSRHATSKLSTLDDLD---AILSFGFRGEALASISSVSRLTLTSRTAEQS 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ +GS + + + VG+TV + DLF+N P RR++++S + H + + +
Sbjct: 119 EAWQAYAEGSD-MAVKVIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTH-IDEWLK 176
Query: 182 RIALVHPKVSFKFID----------MESEDELLCTCSSSSPLALLISSFGIEDFSFLDEV 231
RIALV + F + ++ D+ L + LIS + EV
Sbjct: 177 RIALVRGDIHFTLKNNGKVVRNYRPAKTSDQYLQRLA-------LISGKKFAQQAL--EV 227
Query: 232 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 291
L +SGYI PY QY Y+N R V +L+NH A
Sbjct: 228 KCEHEGLNLSGYIQPPYFEGPASDTQYFYVNGRQVRD----RLVNH------------AV 271
Query: 292 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
+ +QA +L L PH + D+ P K V F V FI +A++SA
Sbjct: 272 RQAFAEHVTGAQASYVLMLELD-PHQV-DVNVHPAKHEVRFHQSRYVHDFILQALQSA 327
>gi|403380641|ref|ZP_10922698.1| DNA mismatch repair protein mutL [Paenibacillus sp. JC66]
Length = 750
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 173/356 (48%), Gaps = 28/356 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L + + N + +G V+ + VV+ELV NS+DAG+T++ V++ ++V D+
Sbjct: 1 MGRIRLLDDHIANQIAAGEVVERPSSVVKELVENSIDAGSTRIEVFLEEGGIQLIRVKDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSG+ + + L RHATSK+ D+ I + GFRGEAL SI+ V+ +E +T +
Sbjct: 61 GSGMEKSDVQLAFHRHATSKISASKDLFR---IRSLGFRGEALPSIAAVAKVECVTSDNT 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R V+ G + L ++ GT + R+LFYN P R KYM++ ++ H V
Sbjct: 118 SGLGTRIVVAGGQV--LAAEEAAASRGTEITVRELFYNTPARLKYMKTIQTELGH-VSDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL HP ++F + + LL T + L ++ + +G + V+
Sbjct: 175 MYRLALAHPGIAFSL--KHNHNSLLHTLGNGDLLQVIAAVYGTSAAKQMLAVSLETPDYT 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCK-GPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
ISGYIS P + + + IN RY+ G + LL K + L
Sbjct: 233 ISGYISRPEWTRANRYGISTIINGRYIRNYGLVQALL-------------KGYHTLLPIN 279
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
R P +L+L L D+ P K V F +L +E ++R+A +++
Sbjct: 280 R-----YPLAVLHLEMSPELVDVNVHPAKLEVRFSKEPELLQSVEESVRAALAQEV 330
>gi|381150984|ref|ZP_09862853.1| DNA mismatch repair protein MutL [Methylomicrobium album BG8]
gi|380882956|gb|EIC28833.1| DNA mismatch repair protein MutL [Methylomicrobium album BG8]
Length = 609
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 173/350 (49%), Gaps = 34/350 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I+ LP + N + +G V+ + VV+ELV NS DAGA ++ + + ++V DDG G
Sbjct: 3 IHLLPTQLVNQIAAGEVVERPSSVVKELVENSFDAGARQIRIDIEQGGARLIRVRDDGGG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I ++ L L RHATSK+ LAD++ + + GFRGEAL SIS V+ L +I++ G
Sbjct: 63 IDKEDLPLALSRHATSKIATLADLEH---VASMGFRGEALPSISSVARLTLISRTEGSDC 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+R G++ + D + D GTTV RDLFYN P RRK+++S + H ++
Sbjct: 120 AWRVAADGTERDF----DPQPDPHPRGTTVEVRDLFYNTPARRKFLKSEKTEFEH-IQTL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD---EVNANDG 236
V R+AL + F+ ++ E+L + +P GI +F+D +++
Sbjct: 175 VERMALSRFDIGFRL--THNQKEILNLKPAETPAEQEKRIAGICGSAFIDNCVKIDFASS 232
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
LE++G++ P S S Q+ Y+N R + KL+ H +A L
Sbjct: 233 GLELTGWVGLPTFSRSQPDMQFFYVNGRLIKD----KLVAHAVK--------QAYQDVLY 280
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
R P ++L L +L D+ P K V F++ V F+ A+
Sbjct: 281 HGRQ-----PVFVLYLALDPALVDVNAHPAKLEVRFREGRLVHDFLFSAL 325
Score = 42.7 bits (99), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 21/179 (11%)
Query: 1187 VIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPE--IGYQLLQNFAEQIKDWG 1244
++D HAA ER+ E L+ + G A+Q L+LP + + AEQ ++
Sbjct: 441 LVDAHAAHERVSYERLKKQYEQGAV-------AQQPLLLPIKIVVTSREADIAEQAHEY- 492
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1304
+ + +RS + L L +VP + ++ L + L L++ S
Sbjct: 493 -FAELGLEVNRSGPETL----------VLRSVPALLAGCDAETLLRDVLADLSEHGTSQR 541
Query: 1305 TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
+L + AC G++ L E ++ ++++T QC HGRPT + L E
Sbjct: 542 VQQRTNALLATMACHGSVRAHRRLTVGEMNALLRDMEETERSGQCNHGRPTWIELSTQE 600
>gi|313677400|ref|YP_004055396.1| DNA mismatch repair protein mutl [Marivirga tractuosa DSM 4126]
gi|312944098|gb|ADR23288.1| DNA mismatch repair protein MutL [Marivirga tractuosa DSM 4126]
Length = 615
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 168/348 (48%), Gaps = 27/348 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+A+ N + +G V+ VV+EL+ NS+DAG++K+ V ++V+DDG+G
Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASVVKELLENSIDAGSSKIKLVVKDAGKQLIQVIDDGAG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ DD + T GFRGEA+ASI+ V+ +E+ TK
Sbjct: 65 MSETDARMCFERHATSKIRK---SDDLFALKTMGFRGEAMASIAAVAQVELKTKTADAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++ S+ +V ++LFYN P RR +++S+P ++ H + + R
Sbjct: 122 GVLLEIEASEIKNQSHTTHTGGTTISV--KNLFYNVPARRNFLKSNPVEMRHIIDE-FHR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL +P+V+F + D + ++ ++ FG L L+I G
Sbjct: 179 VALANPQVAFS---LHQNDMDVYQLNAGKLSQRIVGLFGKNYQEQLVACEETTDQLKIYG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
YI P + + Q+ ++N+RY+ G +H H NGF +G +K
Sbjct: 236 YIGKPEFAKKTRGEQFFFVNNRYIKSGYLH----HAVV-----------NGF-EGLLAK- 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
+A P Y+L L D+ P KT + F D V + AIR A
Sbjct: 279 EAHPFYVLCLEIDPKRIDVNVHPTKTEIKFDDERMVYGILAAAIRQAL 326
Score = 44.3 bits (103), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 1171 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQ-ELVLPEIG 1229
Q+ +K+I L ++DQ AA ERI E+ + + +G S +L EQ +L P+
Sbjct: 435 QIHQKYIATQVKSGLMLVDQQAAHERILFEKFNRHLQNSDGSSQQFLFPEQVQLSAPD-- 492
Query: 1230 YQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF 1280
Y L+ + E++K G++ + SF K+ ++ T +T +V +F
Sbjct: 493 YALVMDMEEELKALGFVIS-------SFGKDTVVINGAPTELTDTSVKSVF 536
>gi|94970246|ref|YP_592294.1| DNA mismatch repair protein MutL [Candidatus Koribacter versatilis
Ellin345]
gi|123256270|sp|Q1ILN0.1|MUTL_KORVE RecName: Full=DNA mismatch repair protein MutL
gi|94552296|gb|ABF42220.1| DNA mismatch repair protein MutL [Candidatus Koribacter versatilis
Ellin345]
Length = 647
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 178/381 (46%), Gaps = 54/381 (14%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
MG I+ L E V N + +G V+ VV+EL+ NS+DAGA ++ V+V + +VDD
Sbjct: 1 MGRIHVLSEHVANKIAAGEVVERPASVVKELIENSLDAGAKRIRVHVEAGGKKLIHIVDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ RD +L ERHATSK L + +D I T GFRGEAL SI+ V+ + + T+A+
Sbjct: 61 GIGMFRDDAMLAFERHATSK---LKNPEDLLSISTLGFRGEALPSIASVARVRLETRANE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P+G + G K L I++ +GT++ +DLF+N P R+K+++S ++ H +
Sbjct: 118 EPSGTVLEIAGGKI--LKIEEAGLPLGTSIAIKDLFFNTPARKKFLKSESTELSH-IASL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFL----------- 228
V AL HP++ ++ + + LL ++ + FG E L
Sbjct: 175 VTHYALAHPEMHWEL--HSATNALLIAPPVATQSERIYQVFGNETLDQLIPLAAQIKLER 232
Query: 229 -----------------DEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPI 271
+E G + + G+IS P + +V++N R +
Sbjct: 233 IGLPKPPPWLRKNEDDEEEQTVEPGEVRLHGFISKPEIQKLNRNSIFVFVNGRLIRD--- 289
Query: 272 HKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVV 331
+L+ H +++++ P LL L P++ D+ P KT V
Sbjct: 290 -RLVQH-----ALTEAYR--------NILPPTLFPVVLLFLEMPYTEVDVNVHPSKTEVR 335
Query: 332 FKDWEPVLAFIERAIRSAWMK 352
F+ V F+ ++R+A K
Sbjct: 336 FRQQSLVHDFVRDSVRAALSK 356
Score = 44.7 bits (104), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 1163 LEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQE 1222
L + L Q+ + FI + L +IDQH A ER+ E KVL + ++ A ++ Q+
Sbjct: 456 LASLRPLGQIRESFILATSNEGLWIIDQHVAHERVLFE----KVL--KQRAAASVET-QQ 508
Query: 1223 LVLPEI-----GYQ-LLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAV 1276
L++P I G Q + AE++ G+ + GSR+F + A
Sbjct: 509 LLMPLIVELTPGQQAVFTEIAEELHQNGF--EVEPFGSRTF--------------AVKAA 552
Query: 1277 PCIFGVNLSDVD--LLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1334
P G+ D++ L E L + + R+ + AC AI L +
Sbjct: 553 PA--GIRAEDIEKTLSEVLDSFEREQQAFNLEHAQSRIAATIACHAAIKVNMPLTQDKME 610
Query: 1335 LIVEELKQTSLCFQCAHGRPTTV 1357
++ EL +T C HGRP +
Sbjct: 611 WLLAELAKTEHPMTCPHGRPIVL 633
>gi|374594325|ref|ZP_09667330.1| DNA mismatch repair protein MutL [Gillisia limnaea DSM 15749]
gi|373872400|gb|EHQ04397.1| DNA mismatch repair protein MutL [Gillisia limnaea DSM 15749]
Length = 614
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 175/347 (50%), Gaps = 29/347 (8%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGS 61
I+ LP+ V N + +G V+ V++EL+ NS+DA A+ + VY+ +++VD+G
Sbjct: 4 VIHLLPDHVANQIAAGEVVQRPASVIKELLENSIDAQASNIQVYIKEAGKILIRIVDNGV 63
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+S L ERHATSK + +D + T GFRGEALASI+ ++ +E+ T+
Sbjct: 64 GMSLTDARLSFERHATSK---IKSAEDLFSLQTKGFRGEALASIAAIAHVELKTRREEDE 120
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
G ++GS+ + D GT++ ++LFYN P RR +++S + H + +
Sbjct: 121 VGTCIRIEGSEI--ISQDACVASSGTSISVKNLFYNIPARRNFLKSDTVETRHIIDEF-Q 177
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
R++L HP ++F + SE L ++ + + G + L VN N ++IS
Sbjct: 178 RVSLAHPHIAFSLVHNSSE---LFQLPDTNYRQRITNILGGKTNEKLVPVNENTEIVKIS 234
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKRS 300
G++ P + + Q+ ++N R++ K P LNH + A+F+ G LK K
Sbjct: 235 GFVGKPEYAKRTRGEQFFFVNDRFI-KSP---YLNHAVTAAFE---------GLLKDK-- 279
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ P+Y L L+ D+ P KT + F D + A + AI+
Sbjct: 280 ---SYPSYFLYLKVDPKSIDINIHPTKTEIKFDDEHALYAILRSAIK 323
>gi|383455898|ref|YP_005369887.1| DNA mismatch repair protein MutL [Corallococcus coralloides DSM
2259]
gi|380733539|gb|AFE09541.1| DNA mismatch repair protein MutL [Corallococcus coralloides DSM
2259]
Length = 625
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 170/358 (47%), Gaps = 32/358 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + + N + +G V+ VV+EL NS+DAGA V V + + + DD
Sbjct: 1 MSRIARLSDVLINKIAAGEVVERPASVVKELCENSLDAGARTVRVELEAGGVGRITISDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+SR+ L ERHATSK L ++DD I + GFRGEA+ +I+ VS + T
Sbjct: 61 GHGMSREDATLCLERHATSK---LRELDDLFHIDSMGFRGEAIPAIASVSRFTLHTAEPD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + ++G + + R VGT + +DLF+N P RRK+M+ ++ H ++
Sbjct: 118 AHEGTQVTVEGGGPPTVEVAPPR--VGTVITVQDLFFNVPARRKFMRQGATELKH-CEEA 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V+R+AL HP+V F F E + S P + ++ G F L V +
Sbjct: 175 VVRLALAHPEVGF-FASHEGNELFSSPASEHDPRERIAAALGPASFPHLFPVEERRLGVV 233
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVC-KGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++GY++SP ++ Y ++N RY+ +G I S +A FL
Sbjct: 234 VTGYLASPEYTLPNARGLYTFVNRRYIRDRGLI-------------STVQRAFQDFLPAG 280
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-WM 351
R P +L++ + D+ P K V F D + + A + R +R+A W+
Sbjct: 281 RQ-----PVVVLHIDVEPAAVDVNVHPQKMEVRFADARGVQDAISAALSRVLRAAPWL 333
>gi|299142778|ref|ZP_07035907.1| DNA mismatch repair protein MutL [Prevotella oris C735]
gi|298575807|gb|EFI47684.1| DNA mismatch repair protein MutL [Prevotella oris C735]
Length = 611
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 165/347 (47%), Gaps = 27/347 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ VV+ELV N+VDAGA + V V ++V+DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAVDAGAKNIQVQVIDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK + DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSK---IRKADDLFALRTMGFRGEALASIAAVAQVELKTRQEKDEI 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + GS+ ++G + VG + LFYN P RRK+++S+ + L+++ R
Sbjct: 122 GTHLSIAGSR--FVGQEPCSCSVGCSFSINSLFYNVPARRKFLKSNSTE-LNNIITAFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+P +SF + S L + +I FG L VN + I+G
Sbjct: 179 IALVYPDISFS---LHSNGTELFNLKAGVLRQRIIDIFGKRLNQELLSVNVDTTMCRING 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A QY+++N RY+ H N KA +
Sbjct: 236 FVGKPQSARKKGAHQYLFVNGRYMK----HPYFN------------KAVTAAFERLVPTG 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
+ P +L P + D+ P KT + F++ P+ + A++ A
Sbjct: 280 EQVPYFLYFEVAPEDI-DVNIHPTKTEIKFENEVPIWQILSAAVKEA 325
>gi|304382086|ref|ZP_07364597.1| DNA mismatch repair protein MutL [Prevotella marshii DSM 16973]
gi|304336684|gb|EFM02909.1| DNA mismatch repair protein MutL [Prevotella marshii DSM 16973]
Length = 604
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 187/395 (47%), Gaps = 28/395 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ V++ELV N+VDAGA + V V ++V+DDG G
Sbjct: 5 IQLLPDTVANQIAAGEVIQRPASVIKELVENAVDAGAETIHVSVTDAGRTSIQVIDDGCG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ DD + T GFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSDTDARLSFERHATSKI---RKADDLFALHTMGFRGEALASIAAVAQIELRTRLRGTQL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G R + G + + G + GT + +LF+N P RRK+++S+ ++ H + R
Sbjct: 122 GTRLSVSGFQ--FTGQEPVSCAEGTNITVENLFFNVPARRKFLKSNATELSH-ITTVFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I LV+P + F + S L + + +I FG + L + A+ ISG
Sbjct: 179 IVLVNPHIRFT---LHSNGTELFNLAQGTTRQRIIDIFGRKLNQELLPIKADTQLCRISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+I P + A Q+ ++N RY+ K P + A + + G
Sbjct: 236 FIGKPESARKRGARQFFFVNGRYM-KHP------YFAKAVMSAYERLVPAG--------- 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
+ P ++ P + D+ P KT + F++ +P+ + A+R + K S D D
Sbjct: 280 EQIPYFIYFDVNPQDI-DVNIHPTKTEIKFENEQPIWQILSAAVRETFGKFNDVPSIDFD 338
Query: 363 MLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQR 397
++P+ + +H ++ ++ +P N K++
Sbjct: 339 TQGKPDIPVFNP-LPNHATTPKVNYNPFYNPFKEQ 372
>gi|291524850|emb|CBK90437.1| DNA mismatch repair protein MutL [Eubacterium rectale DSM 17629]
Length = 618
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 156/288 (54%), Gaps = 19/288 (6%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ VV+ELV N++DAG+T + V + G+ ++++
Sbjct: 1 MPNIAILNQETIDKIAAGEVVERPCSVVKELVENAIDAGSTAITVEIKEGGIS--FIRIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI RD + + RH+TSK+ +D + + GFRGEAL+SIS V+ +E+ITK
Sbjct: 59 DNGCGIERDQVAVAFYRHSTSKI---RSAEDLLTVKSLGFRGEALSSISAVARVELITKT 115
Query: 118 HGRPNGYRKVMKGSKCLY---LGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
+ G R V++GSK L +G D GTT + +DLFYN P RRK+++++ + +
Sbjct: 116 YDELTGTRYVIEGSKELSNEEIGAPD-----GTTFIVKDLFYNVPARRKFLKTAQTEGSY 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ V ++AL HP +SFKFI+ + L T + + ++ FG E S L EV
Sbjct: 171 -ISDMVEKLALSHPDISFKFIN--NNQTKLHTSGNGNRKDIIYHIFGREISSSLLEVKHE 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 282
++ G+I P + + ++ +IN RYV + + + SF
Sbjct: 228 CEYFKVEGFIGKPVITRGNRNYENYFINGRYVKSNILSRAIEEAYKSF 275
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 34/204 (16%)
Query: 1168 VLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS-------VAYLDAE 1220
++ Q+ K + + L +IDQHAA E++ E+ ++ + + S V LDA
Sbjct: 432 IIGQLFKTYWLIEFEDKLYIIDQHAAHEKVLYEKTMARLANKDFTSQRISPPIVMTLDAR 491
Query: 1221 QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CI 1279
+ ++L+ + QI+ +G+ + G + + + A+P +
Sbjct: 492 E--------CEMLEKYRPQIEQFGY--EVEHFGGKEY--------------MISAIPDNL 527
Query: 1280 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1339
F +++ D+ +E L ++ G T P + + S +C+ A+ D L E +++E
Sbjct: 528 FNIDMKDL-FIEMLDDFSNATGRQT-PDIITEKVASMSCKAAVKGNDKLTLPEINKLIDE 585
Query: 1340 LKQTSLCFQCAHGRPTTVPLVNLE 1363
L + C HGRPT + + E
Sbjct: 586 LLSLDNPYNCPHGRPTIISMSKYE 609
>gi|421767302|ref|ZP_16204057.1| DNA mismatch repair protein MutL [Lactococcus garvieae DCC43]
gi|407624222|gb|EKF51003.1| DNA mismatch repair protein MutL [Lactococcus garvieae DCC43]
Length = 630
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAGA+++ V + ++V+D+
Sbjct: 1 MGKIIELDEALANQIAAGEVVERPASVVKELVENSIDAGASRIVVKIKESGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI ++ + +RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GVGIEKEDVAKALKRHATSKIKDKADL---FKIRTLGFRGEAMPSIASVSEFSIETSVLE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G V G K L +R+ GT V +LFYN P R KY++S ++ H +
Sbjct: 118 EESGTHLVSHGGKIDTLEPVAKRE--GTKVTVENLFYNTPARLKYIRSLQAELSH-ITDV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R ++ HP+VSF I+ EL+ T + ++ S +G+ + +V A D
Sbjct: 175 INRQSMAHPEVSFTLIN--EGRELMKTAGNGDLRQVIASVYGLPTAKKMLKVEAEDLDFT 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGY+S P + + + + + IN R++ + LLN G+ G R
Sbjct: 233 VSGYVSLPELTRANRNYITLMINGRFIK----NFLLNRAIIE-----------GY--GNR 275
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +L++ L D+ P K V +++ I AI+ ++++
Sbjct: 276 LMVGRFPIVVLSIGIDPQLADVNVHPTKQEVRLSKERELMSLITEAIQKVFVEE 329
>gi|455644844|gb|EMF23937.1| DNA mismatch repair protein [Citrobacter freundii GTC 09479]
Length = 621
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 173/368 (47%), Gaps = 53/368 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ A +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IKKDELALALARHATSKI---ASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQPE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ K + + + + R
Sbjct: 120 AWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIRR 177
Query: 183 IALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ D + E L C + L ++ IE
Sbjct: 178 IALARFDVTINLSHNGKVVRQYRAVAADGQKERRLGAICGTP----FLENALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLRGWVADPNHTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKI 354
S +++
Sbjct: 327 LSVLQQQL 334
>gi|281423981|ref|ZP_06254894.1| DNA mismatch repair protein MutL [Prevotella oris F0302]
gi|281401906|gb|EFB32737.1| DNA mismatch repair protein MutL [Prevotella oris F0302]
Length = 611
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 165/347 (47%), Gaps = 27/347 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ VV+ELV N+VDAGA + V V ++V+DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAVDAGAKNIQVQVIDAGKTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK + DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSK---IRKADDLFALHTMGFRGEALASIAAVAQVELKTRQEKDEI 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + GS+ ++G + VG + LFYN P RRK+++S+ + L+++ R
Sbjct: 122 GTHLSIAGSR--FVGQEPCSCSVGCSFSINSLFYNVPARRKFLKSNSTE-LNNIITAFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+P +SF + S L + +I FG L VN + I+G
Sbjct: 179 IALVYPDISFS---LHSNGTELFNLKAGVLRQRIIDIFGKRLNQELLSVNVDTTMCRING 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A QY+++N RY+ H N KA +
Sbjct: 236 FVGKPQSARKKGAHQYLFVNGRYMK----HPYFN------------KAVTAAFERLVPAG 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
+ P +L P + D+ P KT + F++ P+ + A++ A
Sbjct: 280 EQVPYFLYFEVAPEDI-DVNIHPTKTEIKFENEVPIWQILSAAVKEA 325
>gi|302389748|ref|YP_003825569.1| DNA mismatch repair protein MutL [Thermosediminibacter oceani DSM
16646]
gi|302200376|gb|ADL07946.1| DNA mismatch repair protein MutL [Thermosediminibacter oceani DSM
16646]
Length = 593
Score = 137 bits (344), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 179/378 (47%), Gaps = 36/378 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
MG I L E + + + +G ++ VV+ELV NS+DAG+ +FV + +KV+DD
Sbjct: 1 MGKIKVLDENISSKIAAGEIIEKPVSVVKELVENSIDAGSRHIFVEIEKGGKSLIKVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ + + L ERHATSK+ L DD I T GFRGEAL SI+ VSLL ++TK HG
Sbjct: 61 GEGMDPEDVRLAFERHATSKISSL---DDIFNIKTLGFRGEALPSIAAVSLLTVLTKTHG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + V+ G + ++ G V+ R++F+N P R K++QS ++ V
Sbjct: 118 SVVGTKCVLNGG--VIEKFEEAAVAEGCCVIVRNIFFNTPARLKFLQSDSREA-SLVVDL 174
Query: 180 VLRIALVHPKVSFKF-IDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
V R A+ HP +SF+ +D + E+L T + + ++ +G L +N
Sbjct: 175 VTRYAIGHPDISFRLSVDGK---EVLYTPGNGNLKEVIARIYGFNLAKDLIHINKTFDFG 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+IS P + ++++ ++N R V L+AS + KA L G
Sbjct: 232 RIDGFISPPKYTRGNRSWETFFVNGRLVKD-------RGLSASLE-----KAYRTLLPGD 279
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
+ P + + SL D+ P K + F+ E + A + +
Sbjct: 280 K-----FPIAFIKISIDGSLVDVNVHPAKIEIRFQR--------ENEVHQALYETVKEGL 326
Query: 359 FDVDMLEDAELPLESSRF 376
F ++ +LP+ + F
Sbjct: 327 FSNTLVPKEDLPIPKTTF 344
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 1166 AKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVL 1225
+++L Q+ + +I V G ++DQHAA ERI E G + + QELV
Sbjct: 406 SRILGQLFETYIVVQGNGEFYLVDQHAAHERILYE------YYSCGMDLPVIS--QELVS 457
Query: 1226 PEIGYQLLQ--NFAEQIKDWGWICNIHTQG--SRSFNKNLNLLQRQITVITLLAVPCIFG 1281
P I + NF E+ +D+ I G F K+ L++ +VP F
Sbjct: 458 PFILKLTFEEINFIEENRDF-----IKRMGFDIEVFGKDTVLIR---------SVPYFFN 503
Query: 1282 VNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELK 1341
+ L E + +L + S ++L S AC AI GD+L P E ++++L
Sbjct: 504 KPVEPASLQEIMDELKENGEFRLR--SREKILASMACHTAIKAGDTLSPDEMRELLDQLM 561
Query: 1342 QTSLCFQCAHGRPTTVPLVNLEALHKQIAQLN 1373
+T + C HGRPT + ++L L K+ ++N
Sbjct: 562 RTQNPYTCPHGRPTMIS-ISLYELEKKFRRIN 592
>gi|340788753|ref|YP_004754218.1| DNA mismatch repair protein MutL [Collimonas fungivorans Ter331]
gi|340554020|gb|AEK63395.1| DNA mismatch repair protein MutL [Collimonas fungivorans Ter331]
Length = 621
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 175/354 (49%), Gaps = 32/354 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I +LP+ + + + +G V+ + VV+EL+ NS+DAGA+++ V + + + D+G G
Sbjct: 11 IQQLPDNLISQIAAGEVVERPSAVVKELLENSLDAGASQITVRLEQGGVKRIAITDNGRG 70
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I+ + L L RHATSK+ L D+++ + T GFRGEALASI+ VS L + ++
Sbjct: 71 IAPEQLPLALARHATSKISSLHDLEN---VATLGFRGEALASIASVSQLTLSSRTAD--A 125
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G+ + GS L + GTTV +DL++N P RRK+++S + H + V R
Sbjct: 126 GHASEIDGST---LAVTPSSGAQGTTVDVQDLYFNTPARRKFLKSEQTEFGH-CAEVVRR 181
Query: 183 IALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
IAL P VSF + ++ D T + ++L + F + LDE G L +
Sbjct: 182 IALARPDVSFSLTHNGKTVDHWNITEIAKRSASILGNEFANARLA-LDE---GAGPLRLH 237
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G++ P S + QY Y+N R+V KLL H + A L G R
Sbjct: 238 GFVGLPTASKARADAQYFYVNGRFVRD----KLLVHAVRA--------AYQDVLHGDR-- 283
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
P+Y+L L +L D+ P K V F+D V F+ A+ A + A
Sbjct: 284 ---YPSYVLGLDLDPALVDVNVHPSKIEVRFRDSRSVHQFVFHAVSRALAQTSA 334
>gi|423226035|ref|ZP_17212501.1| DNA mismatch repair protein mutL [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630892|gb|EIY24873.1| DNA mismatch repair protein mutL [Bacteroides cellulosilyticus
CL02T12C19]
Length = 643
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 182/369 (49%), Gaps = 45/369 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A ++ V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQEIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALAS++ V+ +E+ T+
Sbjct: 65 MSETDARLAFERHATSKIRQAADL---FALRTMGFRGEALASVAAVAEVELKTRMANEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRIVIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILT 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F + S D L + +++ FG + L V+ + +
Sbjct: 175 EFERIALVHPEVAFY---LYSNDTELFNLPAMPLRQRILAVFGKKLNQHLLSVDVDTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SG+++ P + A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGFVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 ----QLIPAGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQIVSAAVKESLGKF 329
Query: 354 IAHDSFDVD 362
A S D D
Sbjct: 330 NAVPSIDFD 338
>gi|357043899|ref|ZP_09105585.1| DNA mismatch repair protein mutL [Prevotella histicola F0411]
gi|355367953|gb|EHG15379.1| DNA mismatch repair protein mutL [Prevotella histicola F0411]
Length = 622
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 169/348 (48%), Gaps = 31/348 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP++V N + +G V+ VV+ELV N++DAGA+ + + V ++V+DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAIDAGASNINVIIVDAGRTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ DD + T GFRGEALASI+ V+ +++ T+ G
Sbjct: 65 MSETDARLSFERHATSKI---RKADDLFSLHTMGFRGEALASIAAVAQIDLKTRMEGEDL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + + GS+ ++G + VG+ +LF+N P RRK+++S+ + L+++ R
Sbjct: 122 GTQLTISGSR--FVGQEPCACPVGSNFTVENLFFNVPARRKFLKSNTTE-LNNIITAFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I LV+P++SF + S L S S ++ FG L + + I G
Sbjct: 179 IVLVYPQISFT---LHSNGTELFNLRSCSYRQRIVEVFGKRLNQDLLPIGVDTSLCRIHG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + QY ++N RY+ HK + +FD +
Sbjct: 236 FVGKPESARKKVLQQYFFVNERYMKHAYFHKA---VMTAFD-------------RLIPQG 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAI 346
+ P Y L P D+ P KT + F++ W+ +LA ++ A+
Sbjct: 280 EQIP-YFLYFEVPAENIDVNIHPTKTEIKFENEQAIWQILLASVKEAV 326
>gi|403060149|ref|YP_006648366.1| hypothetical protein PCC21_037100 [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402807475|gb|AFR05113.1| hypothetical protein PCC21_037100 [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 669
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 172/351 (49%), Gaps = 32/351 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHATSK---IATLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGAL 238
IAL V+ I + +L+ ++ G I +FL V+ G L
Sbjct: 178 IALARFDVA---ITLHHNGKLIRQYRAAPDKNQYERRLGSICGATFLQHALAVSWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P + + QY Y+N R + +L+NH A + +
Sbjct: 235 TIHGWVADPVGAKQLPDMQYCYVNQRMMRD----RLINH------------AIRQAYQDQ 278
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
S Q PAY+L L PH + D+ P K V F V FI +A+ S
Sbjct: 279 LSDEQQ-PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMS 327
>gi|448664389|ref|ZP_21684192.1| DNA mismatch repair protein MutL [Haloarcula amylolytica JCM 13557]
gi|445775034|gb|EMA26048.1| DNA mismatch repair protein MutL [Haloarcula amylolytica JCM 13557]
Length = 716
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 166/369 (44%), Gaps = 40/369 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + + +G V+ VV+ELV N++DA AT+V V V ++V DD
Sbjct: 1 MTDIQRLDDRTVERIAAGEVVERPASVVKELVENAIDADATRVEVVVEAGGTDGIRVTDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R+ + E+H TSK+ +AD++ G+GT GFRGEAL +I VS L + T+ G
Sbjct: 61 GVGMDREAVETAVEKHTTSKIRDIADLE--GGVGTLGFRGEALHAIGAVSRLTVRTRPRG 118
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G V++G +G + GTT+ DLFYN P RRKY++ + H V
Sbjct: 119 GDVGTELVLEGGDVTSVGPAGCPE--GTTIAVEDLFYNVPARRKYLKQESTEFAH-VNTV 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFL------DEVNA 233
V AL +P V+ + E T ++S +G E + E NA
Sbjct: 176 VASYALANPDVAVSL--THGDRETFSTTGQDDLRETVMSVYGREVAESMISVGAGSEANA 233
Query: 234 N--------DGALE-ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDC 284
+ DG L+ + G +S P + + + + Y+N RYV G + A D
Sbjct: 234 DGDESDSFPDGPLDGVHGLVSHPETNRAGREYLSTYVNGRYVRAGTVRD------AVIDA 287
Query: 285 SDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIER 344
+ A + + P +L L P D+ P K V F D E V +
Sbjct: 288 YGTQIAPDRY-----------PFAVLFLDVPAGDVDVNVHPRKMEVRFADDEGVREQVRT 336
Query: 345 AIRSAWMKK 353
A+ A +++
Sbjct: 337 AVEDALLRE 345
>gi|189463695|ref|ZP_03012480.1| hypothetical protein BACINT_00026 [Bacteroides intestinalis DSM
17393]
gi|189438645|gb|EDV07630.1| DNA mismatch repair domain protein [Bacteroides intestinalis DSM
17393]
Length = 642
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 182/369 (49%), Gaps = 45/369 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A ++ V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQEIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALAS++ V+ +E+ T+
Sbjct: 65 MSETDARLAFERHATSKIKEAADL---FALRTMGFRGEALASVAAVAEVELKTRTANEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRIVIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILT 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F + S D L +++ FG + +L V+ + +
Sbjct: 175 EFERIALVHPEVAFY---LYSNDTELFNLPVMPLRQRILAVFGKKLNQYLLSVDVDTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SG+++ P + A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGFVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + +++ + K
Sbjct: 274 ----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVKESLGKF 329
Query: 354 IAHDSFDVD 362
A S D D
Sbjct: 330 NAVPSIDFD 338
>gi|410095924|ref|ZP_11290916.1| DNA mismatch repair protein mutL [Parabacteroides goldsteinii
CL02T12C30]
gi|409227955|gb|EKN20850.1| DNA mismatch repair protein mutL [Parabacteroides goldsteinii
CL02T12C30]
Length = 632
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 179/372 (48%), Gaps = 33/372 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ VV+ELV N++DAGA + V + ++VVDDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASVVKELVENAIDAGAAHIQVNIKDAGRTLIQVVDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK ++ +D + T GFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSETDARMAFERHATSK---ISSAEDLFSLHTMGFRGEALASIAAVAHVELRTRLRGTEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + + GS ++D D G+ ++LF+N P RRK+++S+ + + + +
Sbjct: 122 GTKLSIAGST-----LEDISPDACTEGSIFSIKNLFFNVPARRKFLKSNETEFRNIINEF 176
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
RIALV+P+V+ + D + S +I+ +G L V+A +
Sbjct: 177 E-RIALVNPQVALV---LNHNDTEIFNLPESGLRQRIINVYGKNLNQKLLSVDAQSSLVT 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++ P + A QY ++N R++ HK + +A +
Sbjct: 233 ISGFVGRPDSAKKRGALQYFFVNGRFMKHPYFHKAV------------MQAYEQLIPPGE 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P Y + S D+ P KT + F++ +P+ + A R A K A +
Sbjct: 281 Q-----PNYFIYFTLDPSTIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTI 335
Query: 360 DVDMLEDAELPL 371
D D+ + ++P+
Sbjct: 336 DFDVEDAIDIPV 347
>gi|227115182|ref|ZP_03828838.1| DNA mismatch repair protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 669
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 172/351 (49%), Gaps = 32/351 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHATSK---IATLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGAL 238
IAL V+ I + +L+ ++ G I +FL V+ G L
Sbjct: 178 IALARFDVA---ITLHHNGKLIRQYRAAPDKNQYERRLGSICGATFLQHALVVSWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P + + QY Y+N R + +L+NH A + +
Sbjct: 235 TIHGWVADPVGAKQLPDMQYCYVNQRMMRD----RLINH------------AIRQAYQDQ 278
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
S Q PAY+L L PH + D+ P K V F V FI +A+ S
Sbjct: 279 LSDEQQ-PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMS 327
>gi|381186095|ref|ZP_09893670.1| DNA mismatch repair protein MutL [Flavobacterium frigoris PS1]
gi|379651891|gb|EIA10451.1| DNA mismatch repair protein MutL [Flavobacterium frigoris PS1]
Length = 616
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 171/345 (49%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDA +T + + V+V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAVDARSTDIKLIIKDAGKALVQVIDNGLG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ D+ + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSVTDARLCFERHATSKIRKAEDL---FSLHTKGFRGEALASIAAIAHVEMKTKQDQEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + +++GSK + + K GT+ ++LF+N P RR +++S ++ H V + R
Sbjct: 122 GTQIIVEGSKFVSQEVAVLPK--GTSFAVKNLFFNIPARRNFLKSDTVELRHIVDEF-QR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP + F F SE + SS +++ F + L V + I G
Sbjct: 179 VALAHPNIYFTFYHNGSE---MFNLPGSSLRQRIVNIFSGKTNQKLVPVQEETEIVTIQG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++S P + + Q+ ++N RY+ G +H + + A++D G L K
Sbjct: 236 FVSKPEFAKKNRGEQFFFVNDRYIKSGYLH---HAVMAAYD---------GIL-----KD 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
A P+Y L L P + D+ P KT + F D + A + +I+
Sbjct: 279 GAQPSYFLYLTVPPNTIDINIHPTKTEIKFDDEHALYAILRASIK 323
>gi|317049758|ref|YP_004117406.1| DNA mismatch repair protein MutL [Pantoea sp. At-9b]
gi|316951375|gb|ADU70850.1| DNA mismatch repair protein MutL [Pantoea sp. At-9b]
Length = 613
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 171/352 (48%), Gaps = 32/352 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ V + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDVDIEKGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I++D L + RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IAKDELAMALARHATSK---IASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTEAQTE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + + R
Sbjct: 120 AWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVIRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLD---EVNANDGAL 238
IAL V+ I + +L+ S A G I +F+ ++ L
Sbjct: 178 IALARFDVA---ISLSHNGKLMRQYRGVSQDAQRERRLGAICGTTFMQHALRIDWQHDDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G+++ P S V QY Y+N R + KL+NH +++ G
Sbjct: 235 ALRGWVADPAGSRQVTDLQYCYVNGRMMRD----KLINH-----AIRQAYQTQLG----- 280
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
+ PAY+L L PH + D+ P K V F V FI + + SA
Sbjct: 281 ---DEQQPAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIWQGVMSA 328
>gi|399926184|ref|ZP_10783542.1| DNA mismatch repair protein MutL [Myroides injenensis M09-0166]
Length = 721
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 171/345 (49%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ NSVDAGAT++ + ++V+D+G G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPASVVKELIENSVDAGATEIKLILKEAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+ + ERHATSK+ D+ + T GFRGEALASI+ ++ +E+ T+
Sbjct: 65 MGETDARMAFERHATSKISRAEDL---FALKTKGFRGEALASIAAIAHVELKTRTAETEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G +++G+K + + +GT+ ++LF+N P RR +++S+ + + V + R
Sbjct: 122 GTHIIIEGTKV--VSQEPTVTPIGTSFSVKNLFFNIPARRNFLKSNNVEFRNIVDEFE-R 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALVH V F I SE + S+ +++ FG L + N + ISG
Sbjct: 179 IALVHYDVQFSLIHNGSE---VFNLPVSNIRQRIVNVFGSRTNEKLVPIKENTDIVGISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + + Q+ ++N R+V G +H + + AS++ G L K
Sbjct: 236 FVGKPEFAKKSRGEQFFFVNDRFVKSGYLH---HAVLASYE---------GLL-----KE 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P+Y + L+ P D+ P KT V F D + + + + I+
Sbjct: 279 GTHPSYFIYLQVPADSIDINIHPTKTEVKFDDEQALYSILRSTIK 323
>gi|427414200|ref|ZP_18904390.1| DNA mismatch repair protein MutL [Veillonella ratti
ACS-216-V-Col6b]
gi|425714576|gb|EKU77579.1| DNA mismatch repair protein MutL [Veillonella ratti
ACS-216-V-Col6b]
Length = 694
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 178/364 (48%), Gaps = 39/364 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDD 59
M I+ L E N + +G V+ V++EL+ NS+DAGAT + V + Y++V D+
Sbjct: 1 MALIHVLDEVTINKIAAGEVVERPASVIKELLENSLDAGATSIEVEIANGGTTYMRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSG+S + L RHATSK+ + D+ D I + GFRGEALASI+ VS + T+
Sbjct: 61 GSGMSEEDARLAVLRHATSKIRSVDDLFD---IASLGFRGEALASIASVSHFSLTTRKVD 117
Query: 120 RPNGYRKVMKGSK---CLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+ G R ++ G K CL G GTT+ RDLF+N P RRK++++ + +
Sbjct: 118 QELGTRILIDGGKFTDCLPFGAQP-----GTTIEVRDLFFNTPARRKFLKTE-RTESAKI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAND 235
+ V ++AL +P V+FK I+ D + + L +S+ +G + + +
Sbjct: 172 QDIVGKLALSNPHVAFKLIN---NDTVSIVVPGNGNLIDTVSALYGYKVSDDIFPIVYES 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
+ I G +S P S + +Q V +N+R + I K +++ A + L
Sbjct: 229 EGIHIQGVVSKPTLLKSSRIWQTVVVNNRVIGDKAITKAIDN------------AYHALL 276
Query: 296 -KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW---M 351
KG P LL + P D+ P K+ V F+D +PV + AI A M
Sbjct: 277 PKG------GYPLVLLTITVPPGTVDINVHPRKSEVKFEDDKPVFKAVYHAILQALQNPM 330
Query: 352 KKIA 355
+++A
Sbjct: 331 QQVA 334
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 50/204 (24%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEEL---RHKVLSGEGKSVAYLDA-EQELV 1224
L QV +I G L +IDQHAA ERIR ++L + E Y+DA E+EL+
Sbjct: 512 LGQVAACYILAKKGDNLYIIDQHAAHERIRYDQLCKSAESIPMQELLISQYIDANEEELI 571
Query: 1225 LPE--------IGYQLLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
+ E +G+Q++Q Q+K G I + ++G +LL+
Sbjct: 572 IAEEQNETLLNLGFQVVQGGPTQLKIEGMPIDLVESKGEEILRYVFSLLKDY-------- 623
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKACRGAIMFGDSLLPSEC 1333
T + LR +L +CRGAI G +L +
Sbjct: 624 ---------------------------QTPTKAQLRHEMLAYASCRGAIKAGHTLNTYQM 656
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTV 1357
++++E+L T + C HGRPT +
Sbjct: 657 SVLIEDLFHTDKPYVCPHGRPTII 680
>gi|218132527|ref|ZP_03461331.1| hypothetical protein BACPEC_00386 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992637|gb|EEC58639.1| DNA mismatch repair domain protein [[Bacteroides] pectinophilus
ATCC 43243]
Length = 644
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 176/350 (50%), Gaps = 30/350 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVVDDG 60
I L + N + +G V+ VV+EL N++DA AT V + + G+ ++++ D+G
Sbjct: 3 IQILDQNTINKIAAGEVIERPASVVKELAENAIDAMATAVTIEIKDGGIS--FIRITDNG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
GI + + + RH+TSK+ + D+ + + GFRGEAL+SI+ V+ +E+ITK
Sbjct: 61 CGIDKGEIPMAFLRHSTSKIKSVEDL---MCVRSLGFRGEALSSIAAVAQIELITKTKEA 117
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
G R V++G K ++D GTT + R+LFYN PVRRK+++++ + + V V
Sbjct: 118 FTGVRYVIEGGK--EQNMEDIGAPDGTTFIVRNLFYNTPVRRKFLKTATTEAGY-VSALV 174
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
+A HP+VSF+FI+ + L T + S ++ G + + L EV+A ++I
Sbjct: 175 EHLAFSHPEVSFRFIN--NGQNKLYTSGNGSLKDIIYHVNGRDIATNLLEVSAKTQDIQI 232
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SG+I P S + ++ +IN RY+ I + + G+ KG
Sbjct: 233 SGFIGKPMISRGNRTYENYFINGRYIKSNIITRAIEE---------------GY-KGYIM 276
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
+ Q P L+ S+ D+ P K + F E V F+ AIR+
Sbjct: 277 QHQ-YPFTALHFTIEQSIIDVNVHPTKMELRFSQNEFVYDFVLNAIRNTL 325
Score = 46.6 bits (109), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 45/205 (21%)
Query: 1168 VLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPE 1227
++Q DK FI +DQHAA E+I E H++ SG + +++ P
Sbjct: 467 IIQFEDKMFI----------MDQHAAHEKILYERTMHRLESG--------SIDTQIIAPP 508
Query: 1228 IGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVI--------TLLAVPCI 1279
+ I +++ + ++N+++ R I + +P
Sbjct: 509 V-----------------ILSLNMREKEVVSQNIDIFTRLGFEIESFGGNEYKVTGMPAT 551
Query: 1280 FGVNLSDVDLL-EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1338
+L D +LL + + L + G+S+ P + + + S +C+ A+ + +E +VE
Sbjct: 552 LP-SLDDRELLMDIIDSLMEEGGASSKPELITQRVASMSCKAAVKGNMRMSFAEAQNLVE 610
Query: 1339 ELKQTSLCFQCAHGRPTTVPLVNLE 1363
EL + C HGRPT + + E
Sbjct: 611 ELMNADNPYNCPHGRPTLISMSKYE 635
>gi|86142881|ref|ZP_01061303.1| putative DNA mismatch repair protein [Leeuwenhoekiella blandensis
MED217]
gi|85830326|gb|EAQ48785.1| putative DNA mismatch repair protein [Leeuwenhoekiella blandensis
MED217]
Length = 628
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 170/346 (49%), Gaps = 29/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGA+ + + V ++V+DDG G
Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASSIKLLVKDAGRTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ DD + T GFRGEALASI+ V+ +++ TK
Sbjct: 65 MSPTDARLSFERHATSKINA---ADDLFALSTKGFRGEALASIAAVAHVDLKTKPEDEEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + ++GS + K GT++ ++LF+N P RR +++S ++ H + + R
Sbjct: 122 GTQIEIEGSTIKNQEVCAAVK--GTSIAVKNLFFNIPARRNFLKSDSVELRHVIDEF-QR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL H ++F +SE L ++ ++ FG + L V+ + I G
Sbjct: 179 VALAHETIAFTLYHNDSE---LFNLPKTNKRQRIVGVFGPKTNEKLVPVSEETEIVNIDG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKRSK 301
+I P S K Q+ ++N R++ H LNH ++A+FD G L +
Sbjct: 236 FIIKPEFSKKTKGEQFFFVNDRFIK----HPYLNHSVSAAFD---------GLLPDR--- 279
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
A +Y + L+ D+ P KT V F+D + + A++
Sbjct: 280 --ARASYFIYLKVDPKTIDINIHPTKTEVKFEDEHAIYTLLRAAVK 323
>gi|433546743|ref|ZP_20503047.1| DNA mismatch repair protein MutL [Brevibacillus agri BAB-2500]
gi|432181963|gb|ELK39560.1| DNA mismatch repair protein MutL [Brevibacillus agri BAB-2500]
Length = 786
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 166/351 (47%), Gaps = 30/351 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DA AT + ++V +++VD+
Sbjct: 1 MGNIRVLDEQLANMIAAGEVVERPASVVKELVENAIDASATSIEIHVEEGGLELIRIVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ RD +L ERHATSK+ D+ I T GFRGEAL SI+ VS +E+ +
Sbjct: 61 GHGMDRDDCLLALERHATSKISTPRDLFR---IRTLGFRGEALPSIAAVSRMELTSNRSS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
R G R +++G + + D GT + R LF+N P R KYM+S +V H +
Sbjct: 118 REIGTRLLVEGGEVRE--VADAAAVQGTEICVRSLFFNTPARLKYMKSIATEVGH-ISDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP +SF + LL T L ++ + +G++ L ++
Sbjct: 175 VNRLALTHPGISFTLT--HNGKTLLQTTGDGKLLHVMAAIYGVQVAKLLLPISGETLDFR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
G++S + + +++ +N RYV S+ NN ++G
Sbjct: 233 WDGFLSKTEVTRANRSYLSTLVNGRYV-------------------RSYSLNNAIMRGYH 273
Query: 300 S--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
+ P L + +L D+ P K F + + + IE+++++
Sbjct: 274 TLLPIGRFPIVALQIEMDPTLVDVNVHPAKLEARFSKEDELCSAIEQSVKT 324
>gi|300855301|ref|YP_003780285.1| DNA mismatch repair protein MutL [Clostridium ljungdahlii DSM
13528]
gi|300435416|gb|ADK15183.1| predicted DNA mismatch repair protein MutL [Clostridium ljungdahlii
DSM 13528]
Length = 610
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 201/425 (47%), Gaps = 39/425 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M IN L E N + +G V+ + V++EL+ NS+D+GA + + + +K++DD
Sbjct: 2 MKRINLLDENTSNKIAAGEVVEGPSSVIKELLENSIDSGAKNITIEIEEGGEKSIKIIDD 61
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + HATSK+ + D+D I T GFRGEAL SI+ VS + +KA G
Sbjct: 62 GWGIHPLDIKKAFMPHATSKISTVEDLDK---ISTLGFRGEALCSIASVSNTILKSKAEG 118
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
G ++ G G+ E +++ GTT++ DLF+N P R+K+++ SP +
Sbjct: 119 FDVGNEIIISG------GVLKETQEIGCNKGTTILVEDLFFNVPARKKFLK-SPSREAAG 171
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
+ V R++L +P +SFKF ++ + L T + + ++ +G + + V +
Sbjct: 172 ISDIVTRLSLANPNISFKF--FKNGKKALTTYGTGKVMDVIRCVYGKNIYENIIPVEKHS 229
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
+ I GYI + S + Q ++IN RYV I +A+ S+ N F
Sbjct: 230 DIISICGYIGNSEISRGSRNNQSIFINKRYVKNKSIT------SAAEQAFKSFLTINKF- 282
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
P ++L + D+ P K V F D V F+ AI A +++
Sbjct: 283 ----------PFFILFIDIFPEFVDVNVHPAKWEVKFSDSRMVFKFVFDAIHEA-LRESL 331
Query: 356 HDSFDVDMLEDAELPLES-SRFQSHQSSTHLHSSPLKNLAKQRD--HMFHKECERITFQE 412
DSF +D+ ED P ++ + + Q L SP + + +++ +F K E E
Sbjct: 332 KDSFTIDLKEDDLKPKKTETEIKEVQIPIDLK-SPNEGIYIEKNGSSLFKKSKENSNKNE 390
Query: 413 FQKDP 417
F K+P
Sbjct: 391 FIKEP 395
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 90/212 (42%), Gaps = 34/212 (16%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
+++ Q +I L +IDQHAA E+I E+ + + G + Q L+ P
Sbjct: 423 RIIGQFHSTYIIAEDSSNLYMIDQHAAHEKILFEKYKKSIQKG-------MVLSQVLITP 475
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNK---NLNLLQRQITVITLLAVPCIFGV- 1282
I IKD+ N + F K N+ L I++ VP I G
Sbjct: 476 VI-------MELTIKDY----NCFIENRDLFKKTGFNVELFGNN--TISIREVPMILGKP 522
Query: 1283 ---NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1339
NL +D+L+ L+ + GS T L + AC+ AI S+ E ++EE
Sbjct: 523 DMKNLF-MDILDNLKNM----GSGDTWEVKYLSLATLACKAAIKANASISEIEMNHLIEE 577
Query: 1340 LKQTSLCFQCAHGRPTTVPLV--NLEALHKQI 1369
L+ F C HGRPT + L +LE K+I
Sbjct: 578 LRFIDDPFNCPHGRPTIIKLTLNDLEKKFKRI 609
>gi|218128456|ref|ZP_03457260.1| hypothetical protein BACEGG_00024 [Bacteroides eggerthii DSM 20697]
gi|317475718|ref|ZP_07934977.1| DNA mismatch repair protein MutL [Bacteroides eggerthii 1_2_48FAA]
gi|217989347|gb|EEC55660.1| DNA mismatch repair domain protein [Bacteroides eggerthii DSM
20697]
gi|316908101|gb|EFV29796.1| DNA mismatch repair protein MutL [Bacteroides eggerthii 1_2_48FAA]
Length = 629
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 187/383 (48%), Gaps = 46/383 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A ++ V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAGEIHVLVTDAGKTGIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALASI+ V+ +E+ T+ G
Sbjct: 65 MSETDARLSFERHATSKIREASDL---FALRTMGFRGEALASIAAVAEVELKTRPAGEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRLLIAGSKV------ESQEAVSCPKGSNFSVKNLFFNVPARRKFLKANSTE-LSNILA 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP V+F + S D L +++ FG + L V+ + +
Sbjct: 175 EFERIALVHPDVAFY---LYSNDTELFNLPVMPLRQRILAVFGKKLNQQLLSVDVDTTMI 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SG+++ P S A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGFVAKPETSRKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 ----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELP-LESSR 375
A S D D ++P E SR
Sbjct: 330 NAVPSIDFDTEGMPDIPTFEQSR 352
>gi|385810690|ref|YP_005847086.1| DNA mismatch repair protein [Ignavibacterium album JCM 16511]
gi|383802738|gb|AFH49818.1| DNA mismatch repair enzyme [Ignavibacterium album JCM 16511]
Length = 614
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 173/353 (49%), Gaps = 33/353 (9%)
Query: 2 GTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDG 60
G I LPE + N + +G V+ VV+EL+ NS+DA A + + ++V DDG
Sbjct: 3 GRIKILPENLANKIAAGEVVQRPESVVKELLENSIDAEAKNIELIIKQAGKSLIQVCDDG 62
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
G++ + +L ++HATSK+ L+D++ I T GFRGEAL+SI+ VS LEI T+ +
Sbjct: 63 IGMTEEDAILCIQKHATSKISTLSDLE---AIRTLGFRGEALSSIAAVSQLEIRTQTAQQ 119
Query: 121 PNG-YRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G ++ K + + + + GT V ++LFYN P RRK+++S ++ H +
Sbjct: 120 EIGTLIRIEKEGEIIKEKVSVNK---GTCVSVKNLFYNTPARRKFLKSDATELKHII-DT 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
RIAL HP+++FKF + D L+ S + + F L V L
Sbjct: 176 FNRIALAHPEINFKFYN---NDSLVNDYKSGTLEERIAQIFADNMLDALIPVREKTEYLS 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ GYI P K QY+Y+N R+V +K +NH A F + N KG
Sbjct: 233 LHGYIGKPSIFRKSKGEQYLYLNKRFV----FNKHINH--AVFTAFE-----NILEKGD- 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRS 348
P ++L + S D+ P K V F D + VLA I+++I S
Sbjct: 281 -----YPFFVLFMEIDPSKVDVNIHPSKLEVKFDDEKDVYNFVLAVIKKSIGS 328
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 30/202 (14%)
Query: 1164 EDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQEL 1223
E+ + Q+ K+I L +IDQH A ERI L K LS + + Q+L
Sbjct: 425 EEPSFIIQLHNKYILSQIKSGLMIIDQHVAHERI----LYEKALSRLETDIPF---SQQL 477
Query: 1224 VLP------EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1277
+ P Y++L+ + G+ SR + IT+ VP
Sbjct: 478 LFPITIQFDPASYEILKELNSHLHRLGFQLKF---SSRYY-------------ITIEGVP 521
Query: 1278 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1337
+ L EF+++ T+ + S +C+ AI GD L SE L++
Sbjct: 522 EDIKSGSEERILKEFIEEFK-TNQLEKKLEEKDNIAKSYSCKTAIKAGDKLSESEMRLLI 580
Query: 1338 EELKQTSLCFQCAHGRPTTVPL 1359
++L TS+ + C HGRP + +
Sbjct: 581 DQLFATSMPYVCPHGRPIVIKI 602
>gi|254479236|ref|ZP_05092581.1| DNA mismatch repair protein MutL [Carboxydibrachium pacificum DSM
12653]
gi|214034837|gb|EEB75566.1| DNA mismatch repair protein MutL [Carboxydibrachium pacificum DSM
12653]
Length = 590
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 172/355 (48%), Gaps = 34/355 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I+ L E N + +G V+ +V+ELV NS+DAG+ + V + G+ Y+KV
Sbjct: 1 MNKIHLLDEKTVNKIAAGEVVERPASIVKELVENSIDAGSKNITVEILEGGIP--YIKVT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
DDG G++ VL ERHATSK+ D+ + T T GFRGEALASI+ VS + + TK
Sbjct: 59 DDGCGMNEIDAVLAFERHATSKIKSDEDLFNIT---TLGFRGEALASIAAVSKVVLQTKE 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G R V++G K L +K GT+V +D+F+N P RRK+++ + ++ V
Sbjct: 116 ENETFGTRLVVEGGKILEKTRCGCQK--GTSVEVKDVFFNTPARRKFLKRPSTEAMY-VT 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFL--DEVNAND 235
+ V R+ L +P +SFK++ + + T + S +++ FG E S L E A D
Sbjct: 173 EVVTRLCLSNPGISFKYV--KDKKVQFITSGNGSIEDVILRLFGKEIHSALIFSEFEAED 230
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
L++ + + + + S + Q+ Y+N RYV + ++ ++ SD +
Sbjct: 231 --LKVKAFATKNFLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYVPSDRY------- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
P L L D+ P K V F D + + R IR A
Sbjct: 282 ----------PGVFLYLEINPRFIDVNIHPSKLEVKFSDDRRIFESVYRTIREAL 326
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 128/343 (37%), Gaps = 52/343 (15%)
Query: 1043 GAFKHLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLG 1102
G F +L+ + + N+ PS E F D +I S + E + N L P L
Sbjct: 283 GVFLYLEINPRFIDVNIHPSKLEVKFSDDRRIFESVYRTIREALRESN----LIPEVKLE 338
Query: 1103 AQAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKS- 1161
+ G + + P + D G + + E + I+K+
Sbjct: 339 KDLKNEEGQIGEQVKLSLPLFEVKEKTDD------------GAIFVREEVKTEEKIDKAP 386
Query: 1162 -------------CLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLS 1208
L D +++ + ++ V G +IDQHAA ERI E+L +
Sbjct: 387 KHESSSDSERNVKRLSDIRIVGTLFSTYVIVEKGDVFYIIDQHAAHERILYEKLVSQYER 446
Query: 1209 GEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI 1268
+ + V + + L +++ E + G++ F N
Sbjct: 447 VQSRQVTFPIVVE---LQPGDMEIVGQERELLYKLGYVFE-------EFGNN-------- 488
Query: 1269 TVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSL 1328
+ L VP I G + +E +++L D D SS + + AC+ A+ D+L
Sbjct: 489 -SVVLREVPVILGQPEAKKLFVEIVERLRDKDFSSKVSFKEEEI-ATMACKAAVKAMDTL 546
Query: 1329 LPSECALIVEELKQTSLCFQCAHGRPTTVPL--VNLEALHKQI 1369
+E + E+LK + C HGRP + + LE + K+I
Sbjct: 547 SENEIYKLFEDLKIAENPYTCPHGRPVIISMTKTQLEKMFKRI 589
>gi|154494374|ref|ZP_02033694.1| hypothetical protein PARMER_03729 [Parabacteroides merdae ATCC
43184]
gi|154085818|gb|EDN84863.1| DNA mismatch repair domain protein [Parabacteroides merdae ATCC
43184]
Length = 621
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 177/369 (47%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ VV+ELV N+VDAGA + V + V+V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASVVKELVENAVDAGAGHIQVNIKDAGRTLVQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + DD + T GFRGEALASI VS +E+ T+ G
Sbjct: 65 MSETDARMAFERHATSKI---STADDLFSLHTMGFRGEALASIVAVSQVELRTRLKGAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V GS+ ++ + G+ ++LF+N P RRK+++S+ + + + + R
Sbjct: 122 GTHLVFSGSEL--ESVEPDACTEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFE-R 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+ +V+ ++E + S +++ +G L V+A + ISG
Sbjct: 179 IALVNSQVALSLYHNDTE---IFNLPESGLRQRIVNVYGKTLNQKLLSVDAQSSLVTISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A QY ++N R++ HK + +A +
Sbjct: 236 FVGRPDSAKKRGALQYFFVNGRFMKHPYFHKAV------------MQAYEQLIPAGEQ-- 281
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y + + D+ P KT + F++ +P+ + A R A K A + D D
Sbjct: 282 ---PNYFIYFTLDPATIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFD 338
Query: 363 MLEDAELPL 371
+ + ++P+
Sbjct: 339 VEDAIDIPV 347
>gi|399055635|ref|ZP_10743330.1| DNA mismatch repair protein MutL [Brevibacillus sp. CF112]
gi|398046844|gb|EJL39428.1| DNA mismatch repair protein MutL [Brevibacillus sp. CF112]
Length = 786
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 166/351 (47%), Gaps = 30/351 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DA AT + ++V +++VD+
Sbjct: 1 MGNIRVLDEQLANMIAAGEVVERPASVVKELVENAIDASATSIEIHVEEGGLELIRIVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ RD +L ERHATSK+ D+ I T GFRGEAL SI+ VS +E+ +
Sbjct: 61 GHGMDRDDCLLALERHATSKISTPRDLFR---IRTLGFRGEALPSIAAVSRMELTSNRSS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
R G R +++G + + D GT + R LF+N P R KYM+S +V H +
Sbjct: 118 REIGTRLLVEGGEVRE--VADAAAVQGTEICVRSLFFNTPARLKYMKSIATEVGH-ISDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP +SF + LL T L ++ + +G++ L ++
Sbjct: 175 VNRLALTHPGISFTLT--HNGKTLLQTTGDGKLLHVMAAIYGVQVAKLLLPISGETLDFR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
G++S + + +++ +N RYV S+ NN ++G
Sbjct: 233 WDGFLSKTEVTRANRSYLSTLVNGRYV-------------------RSYSLNNAIMRGYH 273
Query: 300 S--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
+ P L + +L D+ P K F + + + IE+++++
Sbjct: 274 TLLPIGRFPIVALQIEMDPTLVDVNVHPAKLEARFSKEDELCSAIEQSVKT 324
>gi|423303996|ref|ZP_17281995.1| DNA mismatch repair protein mutL [Bacteroides uniformis CL03T00C23]
gi|423307280|ref|ZP_17285270.1| DNA mismatch repair protein mutL [Bacteroides uniformis CL03T12C37]
gi|392685924|gb|EIY79232.1| DNA mismatch repair protein mutL [Bacteroides uniformis CL03T00C23]
gi|392690532|gb|EIY83795.1| DNA mismatch repair protein mutL [Bacteroides uniformis CL03T12C37]
Length = 638
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 188/383 (49%), Gaps = 46/383 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ VV+ELV N++DA A ++ V + ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVVKELVENAIDAEAGEIHVLITDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREAADL---FALRTMGFRGEALASIAAVAEVELKTRPVSEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRLLIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILT 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F + S D L +++ FG + L V+ N +
Sbjct: 175 EFERIALVHPEVAFY---LYSNDTELFNLPVMPLRQRIMAVFGKKLNQQLLSVDVNTTMI 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ISG+++ P S A QY ++N RY+ HK + D+++
Sbjct: 232 KISGFVAKPETSRKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 ----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELP-LESSR 375
A + D D + ++P E +R
Sbjct: 330 SAIPTIDFDTEDMPDIPAFEQAR 352
>gi|320547649|ref|ZP_08041934.1| DNA mismatch repair protein HexB [Streptococcus equinus ATCC 9812]
gi|320447724|gb|EFW88482.1| DNA mismatch repair protein HexB [Streptococcus equinus ATCC 9812]
Length = 647
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 170/355 (47%), Gaps = 42/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV NS+DAG++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ + L RHATSK+ AD+ I T GFRGEA+ SI+ +S + T
Sbjct: 61 GEGIAQEDVALSLHRHATSKIKSQADL---FRIRTLGFRGEAIPSIASISHFTVKTATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + KG + E+++ VGT + +LFYN P R KYM+S ++ H
Sbjct: 118 ENYGTLLIAKGGEI-------EKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNA 233
V V R++L HP+++F I+ + + T S + L I+ +G+ + E++
Sbjct: 171 IV-DVVNRLSLAHPEIAFTLIN---DGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEISN 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
D E+SGYIS P + + + + + IN RY+ ++ N
Sbjct: 227 ADLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRA 267
Query: 294 FLKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 268 ILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMTLISSAI 322
>gi|325661607|ref|ZP_08150231.1| hypothetical protein HMPREF0490_00965 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472134|gb|EGC75348.1| hypothetical protein HMPREF0490_00965 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 691
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 177/359 (49%), Gaps = 36/359 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ +V+ELV N++DA AT + V + G+ +++
Sbjct: 1 MPNIQVLDQVTIDKIAAGEVIERPASIVKELVENAIDAKATAITVEIKDGGIS--LIRIA 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI ++ + L RH+TSK+ + D+ TGI + GFRGEAL+SI+ ++ +E+ TK
Sbjct: 59 DNGCGIPKEEVPLAFLRHSTSKIRSVEDL---TGIASLGFRGEALSSIAAIAQVELRTKV 115
Query: 118 HGRPNGYRKVMKGS--KCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + ++G K + +G+ D GTT R +F+N P RRK++++ + H
Sbjct: 116 KEADAGIQYRIEGGSEKSMEEIGMPD-----GTTFFVRQIFFNTPARRKFLKTPMTEASH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
V + + R+AL HP++SF+F + + L T + ++ +G + L E+NA
Sbjct: 171 -VSELITRLALSHPEISFQF--LTNGQPKLHTSGNGRLKDVIYHIYGRDITGNLLEINAK 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
+ I GYI P S + ++ YIN RYV I K + D++K GF
Sbjct: 228 ANGVAIRGYIGKPLISRGNRNYENYYINGRYVKSSIIAKAI---------EDAYK---GF 275
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ P +L+ + D+ P K V F + V FI ++ A +K
Sbjct: 276 -----TMQHKYPFTVLHFTIDGTDLDVNVHPTKMEVRFSKQQEVYNFIYNTLKDALSEK 329
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 33/220 (15%)
Query: 1152 FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERI----RLEELRHKVL 1207
FF ++K ++ ++ QV + + V + +IDQHAA ER+ L+ ++ K
Sbjct: 488 FFDQKLLSKEAKQEYTLVGQVFETYWIVEYRDQMYIIDQHAAHERVLYERTLKRMKEKQF 547
Query: 1208 SGEGKS---VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLL 1264
+ + S V L ++E QLL E G+ I G S+
Sbjct: 548 TSQRISPPIVLNLSMQEE--------QLLSEHMENFTKIGF--EIEPFGGDSY------- 590
Query: 1265 QRQITVITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIM 1323
+ AVP +F + D+ L+E L L+D+ ++ P VL + S +C+ A+
Sbjct: 591 -------AVRAVPDNLFSIAKKDL-LIEMLDSLSDSISTNLAPDIVLEKIASMSCKAAVK 642
Query: 1324 FGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
L E ++ EL + + C HGRPT + + E
Sbjct: 643 GNSRLSGREVDALIGELLELDNPYHCPHGRPTIIAMTKRE 682
>gi|260893757|ref|YP_003239854.1| DNA mismatch repair protein MutL [Ammonifex degensii KC4]
gi|260865898|gb|ACX53004.1| DNA mismatch repair protein MutL [Ammonifex degensii KC4]
Length = 560
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 166/354 (46%), Gaps = 36/354 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDG 60
MG I L + V +G V+ VV+ELV N++DA A ++ V V + VVDDG
Sbjct: 1 MGKIKVLDPDTVSLVAAGEVVERPASVVKELVENALDAQARRITVRVEKDFGPITVVDDG 60
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
GI D ++L RHATSK+ D+++ T T GFRGEAL SI+ VS L + T+ G
Sbjct: 61 CGIPADEVLLAFSRHATSKISTARDLENIT---TLGFRGEALPSIAAVSRLTMKTREPGA 117
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
G + G + L RK+ GT VV RDLFYN P RRK++ S + H
Sbjct: 118 EEGVLVEIAGGEVL-------RKETVGAPPGTQVVVRDLFYNVPARRKFLSSWRAESSHI 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
V + +AL P+VSF F E + + L L + +G E S L + A
Sbjct: 171 V-DLLEHLALAWPEVSFSFWLAGRE---VFHTPGTGLLPALTAIYGAEVTSTLLPLEAGK 226
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
G L++SG++ P + + Q + +N R V + L +A +F
Sbjct: 227 GELKVSGFLGKPELARGHRRHQVIVVNRRLVKH---YGLAQAIAEAF------------- 270
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
G + P ++L L P + D+ P KT V F + VLA A++ A
Sbjct: 271 -GSLLPAGKYPFFVLFLELPPRMVDVNVHPQKTVVRFANEGEVLALCREAVKRA 323
>gi|116493021|ref|YP_804756.1| DNA mismatch repair protein [Pediococcus pentosaceus ATCC 25745]
gi|122265515|sp|Q03EQ8.1|MUTL_PEDPA RecName: Full=DNA mismatch repair protein MutL
gi|116103171|gb|ABJ68314.1| DNA mismatch repair protein MutL [Pediococcus pentosaceus ATCC
25745]
Length = 645
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 202/424 (47%), Gaps = 49/424 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ L E + + + +G V+ VV+ELV N++DAG++++ + + ++++D+
Sbjct: 1 MAEIHELSEILADQIAAGEVVERPASVVKELVENAIDAGSSRIDILLEESGLKMIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEAL---ASISDVSLLEIITK 116
GSGI + + + +RHATSK+ +D+ +GT GFRGEAL ASI+DV +L T
Sbjct: 61 GSGIDANQVEIAFKRHATSKISSRSDL---FKVGTLGFRGEALPSIASIADVEMLTATTD 117
Query: 117 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G+ YR G K G D + GT + +DLF+N P R KY++S + L +
Sbjct: 118 GPGKKIHYR----GGKLEDSG--DAQSRQGTDITVQDLFFNTPARLKYLKSLQTE-LSKI 170
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V RIAL +P+V+ +E EL+ T + + +L + +G ++ + V +
Sbjct: 171 TDIVNRIALSYPEVAISL--QNNERELMRTSGNGNIQQVLANIYGAKNAQKMVHVKEQNI 228
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
I GYIS P + + +++ V +N RY+ I K + +G+
Sbjct: 229 DFTIDGYISLPEFTRANRSYITVLVNGRYIKNFQISKAI---------------IDGY-- 271
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
G + P +LN++ L D+ P K V + + +L I +A+ + K
Sbjct: 272 GSKLMVGRYPVAVLNIKTDPILVDVNVHPTKQEVRISEEQTLLDLISKAVFNELADK--- 328
Query: 357 DSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQR-DHMFHKECERITFQEFQK 415
+++ DA L+ SR + + SS +LA+ F E + +T +
Sbjct: 329 -----NLIPDAVDNLKKSRVK-------VSSSEQLDLARMAISGSFEMEQDHVTIPDTDN 376
Query: 416 DPVE 419
D VE
Sbjct: 377 DEVE 380
>gi|393785526|ref|ZP_10373676.1| DNA mismatch repair protein mutL [Bacteroides salyersiae
CL02T12C01]
gi|392662281|gb|EIY55845.1| DNA mismatch repair protein mutL [Bacteroides salyersiae
CL02T12C01]
Length = 624
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 181/377 (48%), Gaps = 45/377 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A + V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAGNIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREASDL---FALRTMGFRGEALASIAAVAQVELKTRLENEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTKLVIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILT 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP V+F +SE L + +++ FG + L V+ N +
Sbjct: 175 EFERIALVHPDVAFSLYSNDSE---LFNLPVAPLRQRILAVFGKKLNQQLLSVDVNTTMI 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SGY++ P + A QY ++N RY+ HK +
Sbjct: 232 KLSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV----------------------M 269
Query: 299 RSKSQACP-----AYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ Q P +Y L + D+ P KT + F++ + + + A++ + K
Sbjct: 270 EAYEQLIPVGEQVSYFLYFEVDPANIDVNIHPTKTEIKFENEQAIWQIVSAAVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELP 370
A S D D + ++P
Sbjct: 330 NAVPSIDFDTEDMPDIP 346
>gi|310642432|ref|YP_003947190.1| DNA mismatch repair protein mutl [Paenibacillus polymyxa SC2]
gi|386041502|ref|YP_005960456.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa M1]
gi|309247382|gb|ADO56949.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa SC2]
gi|343097540|emb|CCC85749.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa M1]
Length = 698
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 170/355 (47%), Gaps = 26/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I L E + N + +G V+ VV+ELV N++DAG T+V V+V ++V D+
Sbjct: 1 MSKIRVLDEHIANQIAAGEVVERPASVVKELVENAIDAGGTRVDVWVEEGGLQSIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI + + RHATSK+GH D+ T + GFRGEAL SI+ VS +E++T A
Sbjct: 61 GSGIEPEDVETAFYRHATSKIGHGRDLFQIT---SLGFRGEALPSIAAVSKVELLTAAGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ V++G K + R+ GT RDLFYN P R KYM++ ++ H +
Sbjct: 118 DGRARKLVIEGGKLMLHENAAGRQ--GTDFTVRDLFYNTPARLKYMKTIQTELGH-ISDV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL HP+V+F + + LL T + L ++ + +G + V
Sbjct: 175 LYRMALSHPEVAFTL--RHNGNTLLQTLGNGDLLQVIAAIYGTSAAKSMLMVEGESLDYR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISGY+S P + S + +N R+V +++ L KA + L R
Sbjct: 233 ISGYVSRPEWTRSNRNAISTVVNGRFVRSYGLNQAL------------LKAYHTLLPINR 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
P ++ L SL D+ P K V F + +E ++++ +++
Sbjct: 281 -----YPLAVIQLDMHPSLVDVNVHPAKLEVRFSKEAELFQLVEDSVKAVLGQQV 330
>gi|237729103|ref|ZP_04559584.1| DNA mismatch repair protein mutL [Citrobacter sp. 30_2]
gi|226908832|gb|EEH94750.1| DNA mismatch repair protein mutL [Citrobacter sp. 30_2]
Length = 622
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 172/368 (46%), Gaps = 53/368 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ A +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IKKDELALALARHATSKI---ASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQPE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ K + + + + R
Sbjct: 120 AWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIRR 177
Query: 183 IALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ D + E L C + L + IE
Sbjct: 178 IALARFDVTINLSHNGKVVRQYRAVAADGQKERRLGAICGTP----FLEHALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLRGWVADPNHTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKI 354
S +++
Sbjct: 327 LSVLQQQL 334
>gi|308069370|ref|YP_003870975.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa E681]
gi|305858649|gb|ADM70437.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa E681]
Length = 724
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 170/355 (47%), Gaps = 26/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I L E + N + +G V+ VV+ELV N++DAG T+V V+V ++V D+
Sbjct: 1 MSKIRVLDEHIANQIAAGEVVERPASVVKELVENAIDAGGTRVDVWVEEGGLQSIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI + + RHATSK+GH D+ T + GFRGEAL SI+ VS +E++T A
Sbjct: 61 GSGIEPEDVETAFYRHATSKIGHGRDLFQIT---SLGFRGEALPSIAAVSKVELLTAAGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ V++G K + +D GT R+LFYN P R KYM++ ++ H +
Sbjct: 118 DGRARKLVIEGGKLVLH--EDAASRQGTDFTVRELFYNTPARLKYMKTIQTELGH-ISDV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL HP+V+F + + LL T + L ++ + +G + +
Sbjct: 175 LYRMALSHPEVAFTL--RHNGNTLLQTLGNGDLLQVIAAIYGTSAAKSMLLLEGESLDYR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISGYIS P + S + +N R+V +++ L KA + L R
Sbjct: 233 ISGYISRPEWTRSNRNAISTVVNGRFVRSYGLNQAL------------LKAYHTLLPINR 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
P ++ L SL D+ P K V F + +E ++++ +++
Sbjct: 281 -----FPLAVIQLEMHPSLVDVNVHPAKLEVRFSKETELFQLVEDSVKAVLGQQV 330
>gi|423725444|ref|ZP_17699581.1| DNA mismatch repair protein mutL [Parabacteroides merdae
CL09T00C40]
gi|409234568|gb|EKN27396.1| DNA mismatch repair protein mutL [Parabacteroides merdae
CL09T00C40]
Length = 621
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 177/369 (47%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ VV+ELV N+VDAGA + V + V+V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASVVKELVENAVDAGAGHIQVNIKDAGRTLVQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + DD + T GFRGEALASI VS +E+ T+ G
Sbjct: 65 MSETDARMAFERHATSKI---STADDLFSLHTMGFRGEALASIVAVSQVELRTRLKGAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V GS+ ++ + G+ ++LF+N P RRK+++S+ + + + + R
Sbjct: 122 GTHLVFSGSEL--ESVEPDACTEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFE-R 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+ +V+ ++E + S +++ +G L V+A + ISG
Sbjct: 179 IALVNSQVALSLYHNDTE---IFNLPESGLRQRIVNVYGKTLNQKLLSVDAQSSLVTISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A QY ++N R++ HK + +A +
Sbjct: 236 FVGRPDSAKKRGALQYFFVNGRFMKHPYFHKAV------------MQAYEQLIPAGEQ-- 281
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y + + D+ P KT + F++ +P+ + A R A K A + D D
Sbjct: 282 ---PNYFIYFTLDPATIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFD 338
Query: 363 MLEDAELPL 371
+ + ++P+
Sbjct: 339 VEDAIDIPV 347
>gi|375011799|ref|YP_004988787.1| DNA mismatch repair protein MutL [Owenweeksia hongkongensis DSM
17368]
gi|359347723|gb|AEV32142.1| DNA mismatch repair protein MutL [Owenweeksia hongkongensis DSM
17368]
Length = 615
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 175/349 (50%), Gaps = 27/349 (7%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
I LP++V N + +G V+ V+EL+ NS+DAGA + + + ++V+D+G+
Sbjct: 4 VIRLLPDSVANQIAAGEVVQRPASAVKELLENSIDAGADHITLIIKDAGKTLMQVIDNGT 63
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+S + ERHATSK+ +D I T GFRGEALASI+ V+ +E+ TK
Sbjct: 64 GMSETDARMAFERHATSKI---QKAEDIFAIHTKGFRGEALASIAAVAQVELKTKKEDEE 120
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
G ++GSK + + ++ GT + ++LF+N P RR +++S+ ++ H + +
Sbjct: 121 LGVMLRVEGSKVMEQEYCNTKR--GTQLEVKNLFFNIPARRNFLKSNNVELRHIIDEFE- 177
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
R+AL HP + F F++ +E L ++ +++ FG + L V+ L+++
Sbjct: 178 RVALAHPDIHFSFVNNGNE---LFDLPAAGLRQRIVNIFGSKFNEKLVPVDEETPILKLT 234
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G+I P S + Q+ + N+RY+ +H+ + C+ A G L
Sbjct: 235 GFICKPEFSKKTRGEQFFFANNRYIRNNYLHRAV--------CN----AFEGLL-----T 277
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
+ P+Y L + + D+ P KT + F+D + I A++ A
Sbjct: 278 EGSHPSYFLFMDIDPAKIDVNIHPTKTEIKFEDERSIFTIIRTAVKHAL 326
>gi|212212503|ref|YP_002303439.1| DNA mismatch repair protein [Coxiella burnetii CbuG_Q212]
gi|226723030|sp|B6J016.1|MUTL_COXB2 RecName: Full=DNA mismatch repair protein MutL
gi|212010913|gb|ACJ18294.1| MutL [Coxiella burnetii CbuG_Q212]
Length = 575
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 175/369 (47%), Gaps = 44/369 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + N + +G V+ VV+EL+ NS+DA A+ + V + +++ DD
Sbjct: 1 MMYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + LVL ERHATSK+ + D+ D T T GFRGEALASIS VS L + ++
Sbjct: 61 GDGIHPEDLVLALERHATSKIAKIDDLQDVT---TLGFRGEALASISAVSRLTLTSRQKN 117
Query: 120 RPNGYR------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
GYR K+M + GTT+ +DLFYN P RRK+++ SP
Sbjct: 118 AEMGYRISNISHKIMTPVPAAH--------PQGTTIDVQDLFYNTPARRKFLR-SPATEF 168
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
+++ + R+AL H + +F+ +E E++ S+++ I F+ A
Sbjct: 169 QHIRRIIERLALSH--FTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALA 226
Query: 234 ---NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 290
+ L + GYI+ + S QY+Y+N R+V I + L A D
Sbjct: 227 IEFSQSGLTLKGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQ--AYHDV------ 278
Query: 291 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G+ PAY+L L + D+ P K V F+D + V F+ A+++A
Sbjct: 279 ---LFHGRH------PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTAL 329
Query: 351 MKK---IAH 356
+ IAH
Sbjct: 330 AQTKPGIAH 338
>gi|449138379|ref|ZP_21773645.1| DNA mismatch repair protein MutL [Rhodopirellula europaea 6C]
gi|448882924|gb|EMB13472.1| DNA mismatch repair protein MutL [Rhodopirellula europaea 6C]
Length = 707
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 173/350 (49%), Gaps = 28/350 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I +LP + N + +G V+ VV+EL+ NS+DAG+T++ + + G +++ DDG G
Sbjct: 17 IRQLPAHLVNQIAAGEVIERPASVVKELLENSIDAGSTRIELSLEGGGVELIRISDDGCG 76
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ + L L HATSKL D + +GT GFRGEALASI+ VS + I ++A G+
Sbjct: 77 MTAEQLPLAVTSHATSKL---PDDESLFHVGTLGFRGEALASIASVSQMTIRSRAEGQDG 133
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + ++G G VGT + R+LF+N PVRRK+++ +P+ + + R
Sbjct: 134 GCQIDIRGGVIETPGPCG--CPVGTVIEVRNLFFNTPVRRKFLK-TPQTERGHIVEAFTR 190
Query: 183 IALVHPKVSFKFIDMESED-ELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
+AL +PKV F + + E +LL T + + S FG E L + D ++I+
Sbjct: 191 LALANPKVHFVLRNGDKEMFDLLPTPRWADRIE---SFFGTEISEALIPIENQDETVQIT 247
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
GY P S QY+++N R++ + L H +A G L R
Sbjct: 248 GYACDPSVSRGNNRMQYLFLNGRHIRD----RALQHALG--------EAYRGMLMVGRH- 294
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
P L +R P + D+ P K V F D V + + + +R ++
Sbjct: 295 ----PVCFLRMRMPADMIDVNVHPAKLEVRFTDSGRVYSRLLQTLRQRFL 340
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 19/189 (10%)
Query: 1171 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1230
QV ++++ + VIDQHA ER+ E + KVL + A L+A+Q LV +
Sbjct: 512 QVHQRYLVTQDEKGMVVIDQHALHERVLYERVCQKVLHED----ASLEAQQLLVPEPVSL 567
Query: 1231 QLLQNFAE-QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1289
+ A ++KD + + F L+Q + P + N D+
Sbjct: 568 TPAERAAALEVKDTLSRIGLEIE---DFGGETILIQ---------SYPAML-PNKPPADM 614
Query: 1290 LEFLQQLADTDGSSTTPPSVLR-VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQ 1348
L + + G P +L +L++ AC+ A+ GD L P E ++E+
Sbjct: 615 LRTVLESVMGAGRDPNPKDLLNHLLSTVACKAAVKAGDPLSPEEITSLLEQKDLYQETHH 674
Query: 1349 CAHGRPTTV 1357
C HGRPT +
Sbjct: 675 CPHGRPTAL 683
>gi|218262303|ref|ZP_03476817.1| hypothetical protein PRABACTJOHN_02491 [Parabacteroides johnsonii
DSM 18315]
gi|218223454|gb|EEC96104.1| hypothetical protein PRABACTJOHN_02491 [Parabacteroides johnsonii
DSM 18315]
Length = 621
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 177/369 (47%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ VV+ELV N+VDAGA + V + V+V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASVVKELVENAVDAGAGHIQVNIKDAGRTLVQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + DD + T GFRGEALASI VS +E+ T+ G
Sbjct: 65 MSETDARMAFERHATSKI---STADDLFSLHTMGFRGEALASIVAVSQVELRTRLKGAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V GS+ ++ + G+ ++LF+N P RRK+++S+ + + + + R
Sbjct: 122 GTHLVFSGSEL--ESVEPDACTEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFE-R 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+ +V+ ++E + S +++ +G L V+A + ISG
Sbjct: 179 IALVNSQVALSLYHNDTE---IFNLPESGLRQRIVNVYGKTLNQKLLSVDAQSSLVTISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A QY ++N R++ HK + +A +
Sbjct: 236 FVGRPDSAKKRGALQYFFVNGRFMKHPYFHKAV------------MQAYEQLIPAGEQ-- 281
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y + + D+ P KT + F++ +P+ + A R A K A + D D
Sbjct: 282 ---PNYFIYFTLDPATIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFD 338
Query: 363 MLEDAELPL 371
+ + ++P+
Sbjct: 339 VEDAIDIPV 347
>gi|423343085|ref|ZP_17320799.1| DNA mismatch repair protein mutL [Parabacteroides johnsonii
CL02T12C29]
gi|409216761|gb|EKN09744.1| DNA mismatch repair protein mutL [Parabacteroides johnsonii
CL02T12C29]
Length = 621
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 177/369 (47%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ VV+ELV N+VDAGA + V + V+V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASVVKELVENAVDAGAGHIQVNIKDAGRTLVQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + DD + T GFRGEALASI VS +E+ T+ G
Sbjct: 65 MSETDARMAFERHATSKI---STADDLFSLHTMGFRGEALASIVAVSQVELRTRLKGAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V GS+ ++ + G+ ++LF+N P RRK+++S+ + + + + R
Sbjct: 122 GTHLVFSGSEL--ESVEPDACTEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFE-R 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+ +V+ ++E + S +++ +G L V+A + ISG
Sbjct: 179 IALVNSQVALSLYHNDTE---IFNLPESGLRQRIVNVYGKTLNQKLLSVDAQSSLVTISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A QY ++N R++ HK + +A +
Sbjct: 236 FVGRPDSAKKRGALQYFFVNGRFMKHPYFHKAV------------MQAYEQLIPAGEQ-- 281
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y + + D+ P KT + F++ +P+ + A R A K A + D D
Sbjct: 282 ---PNYFIYFTLDPATIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFD 338
Query: 363 MLEDAELPL 371
+ + ++P+
Sbjct: 339 VEDAIDIPV 347
>gi|238750069|ref|ZP_04611572.1| DNA mismatch repair protein mutL [Yersinia rohdei ATCC 43380]
gi|238711613|gb|EEQ03828.1| DNA mismatch repair protein mutL [Yersinia rohdei ATCC 43380]
Length = 632
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 192/380 (50%), Gaps = 36/380 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
IS+D L L RHATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISKDDLALALARHATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAQQNE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTC-SSSSPLALLISSFGIEDFSFLDEVNA---NDGAL 238
IAL V+ I++ +L+ +++ P I +FL + A G L
Sbjct: 178 IALARFDVA---INLSHNGKLMRQYRAATDPSQHERRLASICGPAFLQQALAISWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S ++ QY Y+N+R + +L+NH +A LK
Sbjct: 235 TIRGWVADPAASRTLSEMQYCYVNNRMMRD----RLINHAIR--------QAYQDLLKDD 282
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 283 QQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQAATP 335
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+++ ED E +E+ R+Q
Sbjct: 336 VLNIN--EDGE-EIEAPRWQ 352
>gi|217970237|ref|YP_002355471.1| DNA mismatch repair protein MutL [Thauera sp. MZ1T]
gi|217507564|gb|ACK54575.1| DNA mismatch repair protein MutL [Thauera sp. MZ1T]
Length = 628
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 171/348 (49%), Gaps = 31/348 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I+RL + + N + +G V+ V++E++ N+VDAGA + V + ++V DD
Sbjct: 1 MPHIHRLSDLLVNQIAAGEVVERPASVLKEILENAVDAGARAIEVQLEQGGVRRIRVADD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+RD L L ERHATSK +A +DD +GT GFRGEALA+I+ V+ I ++A G
Sbjct: 61 GCGIARDELALALERHATSK---IATLDDLERVGTMGFRGEALAAIAAVARTGITSRAEG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ +R + G + +D GT V DL+YN P RRK++++ + H
Sbjct: 118 ASHAWR-IEAGREPEPAALDQ-----GTVVDVADLYYNTPARRKFLKTESTEFAH-CDDM 170
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
R+AL P + + + ++ S P A + + G + EV A+ G L
Sbjct: 171 FRRVALARPDIGLQ---LAHNGRVIHRLPPSPPAARVAALMGDDFLQHAREVQADAGILR 227
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G+ S P S + + QY ++N R+V KLL H +A L G R
Sbjct: 228 LAGFASLPAYSRASRDAQYFFVNGRFVRD----KLLAHAV--------REAYADILHGAR 275
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
PAY+L L + D+ P K V F++ V F+ A+R
Sbjct: 276 H-----PAYVLFLELDPAGVDVNVHPAKIEVRFRESRAVHQFVFHAVR 318
>gi|20807805|ref|NP_622976.1| DNA mismatch repair protein [Thermoanaerobacter tengcongensis MB4]
gi|25090753|sp|Q8RA70.1|MUTL_THETN RecName: Full=DNA mismatch repair protein MutL
gi|20516363|gb|AAM24580.1| DNA mismatch repair enzyme (predicted ATPase) [Thermoanaerobacter
tengcongensis MB4]
Length = 590
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 172/355 (48%), Gaps = 34/355 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I+ L E N + +G V+ +V+ELV NS+DAG+ + V + G+ Y+KV
Sbjct: 1 MNKIHLLDEKTVNKIAAGEVVERPASIVKELVENSIDAGSKNITVEILEGGIP--YIKVT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
DDG G++ VL ERHATSK+ D+ + T T GFRGEALASI+ VS + + TK
Sbjct: 59 DDGCGMNEIDAVLAFERHATSKIRSDEDLFNIT---TLGFRGEALASIAAVSKVVLQTKE 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G R V++G K L +K GT+V +D+F+N P RRK+++ + ++ V
Sbjct: 116 ENETFGTRLVVEGGKILEKTRCGCQK--GTSVEVKDVFFNTPARRKFLKRPSTEAMY-VT 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFL--DEVNAND 235
+ V R+ L +P +SFK++ + + T + S +++ FG E S L E A D
Sbjct: 173 EVVTRLCLSNPGISFKYV--KDKKVQFITSGNGSIEDVILRLFGKEVHSALIFSEFEAED 230
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
L++ + + + + S + Q+ Y+N RYV + ++ ++ SD +
Sbjct: 231 --LKVKAFATKNFLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYVPSDRY------- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
P L L D+ P K V F D + + R IR A
Sbjct: 282 ----------PGVFLYLEINPRFIDVNIHPSKLEVKFSDDRRIFESVYRTIREAL 326
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 128/343 (37%), Gaps = 52/343 (15%)
Query: 1043 GAFKHLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLG 1102
G F +L+ + + N+ PS E F D +I S + E + N L P L
Sbjct: 283 GVFLYLEINPRFIDVNIHPSKLEVKFSDDRRIFESVYRTIREALRESN----LIPEVKLE 338
Query: 1103 AQAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKS- 1161
+ G + + P + D G + + E + I+K+
Sbjct: 339 KDLKNEEGQIGEQVKLSLPLFEVKEKTDD------------GAIFVREEVKTEEKIDKAP 386
Query: 1162 -------------CLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLS 1208
L D +++ + ++ V G +IDQHAA ERI E+L +
Sbjct: 387 KHESSSDSERNVKRLSDIRIVGTLFSTYVIVEKGDVFYIIDQHAAHERILYEKLVSQYER 446
Query: 1209 GEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI 1268
+ + V + + L +++ E + G++ F N
Sbjct: 447 VQSRQVTFPIVVE---LQPGDMEIVGQERELLYKLGYVFE-------EFGNN-------- 488
Query: 1269 TVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSL 1328
+ L VP I G + +E +++L D D SS + + AC+ A+ D+L
Sbjct: 489 -SVVLREVPVILGQPEAKKLFVEIVERLRDKDFSSKVSFKEEEI-ATMACKAAVKAMDTL 546
Query: 1329 LPSECALIVEELKQTSLCFQCAHGRPTTVPL--VNLEALHKQI 1369
+E + E+LK + C HGRP + + LE + K+I
Sbjct: 547 SENEIYKLFEDLKIAENPYTCPHGRPVIISMTKTQLEKMFKRI 589
>gi|209363988|ref|YP_001424550.2| DNA mismatch repair protein [Coxiella burnetii Dugway 5J108-111]
gi|207081921|gb|ABS76590.2| DNA mismatch repair protein [Coxiella burnetii Dugway 5J108-111]
Length = 575
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 175/369 (47%), Gaps = 44/369 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + N + +G V+ VV+EL+ NS+DA A+ + V + +++ DD
Sbjct: 1 MMYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + LVL ERHATSK +A +DD I T GFRGEALASIS VS L + ++
Sbjct: 61 GDGIHPEDLVLALERHATSK---IAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKN 117
Query: 120 RPNGYR------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
GYR K+M + GTT+ +DLFYN P RRK+++ SP
Sbjct: 118 AEMGYRISNISHKIMTPVPAAH--------PQGTTIDVQDLFYNTPARRKFLR-SPATEF 168
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
+++ + R+AL H + +F+ +E E++ S+++ I F+ A
Sbjct: 169 QHIRRIIERLALSH--FTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALA 226
Query: 234 ---NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 290
+ L + GYI+ + S QY+Y+N R+V I + L A D
Sbjct: 227 IEFSQSGLTLKGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQ--AYHDV------ 278
Query: 291 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G+ PAY+L L + D+ P K V F+D + V F+ A+++A
Sbjct: 279 ---LFHGRH------PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTAL 329
Query: 351 MKK---IAH 356
+ IAH
Sbjct: 330 AQAKPGIAH 338
>gi|421875810|ref|ZP_16307392.1| DNA mismatch repair protein mutL [Brevibacillus laterosporus GI-9]
gi|372455217|emb|CCF16941.1| DNA mismatch repair protein mutL [Brevibacillus laterosporus GI-9]
Length = 752
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 169/350 (48%), Gaps = 26/350 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E V N + +G V+ VV+ELV N++DAG ++V +++ +++VD+
Sbjct: 1 MGKIQVLTEQVSNMIAAGEVVERPASVVKELVENAIDAGTSQVEIHIEEGGLQLIRIVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R+ + ERHATSK+ D+ I + GFRGEALASI+ VS +E+++
Sbjct: 61 GVGMDREDCLRAFERHATSKIRSARDL---FHIRSLGFRGEALASIASVSRIELMSAEDS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + V+ G ++D + GT +V RDLF+N P R KYM+S +V H V
Sbjct: 118 GQVGTKVVIDGGDM--KSVEDLARVKGTEIVVRDLFFNTPARLKYMRSISTEVGH-VSDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+A+ +PK++F + LL T L ++ + +G++ L
Sbjct: 175 VNRLAITYPKIAFTLT--HNGKNLLQTSGDGKLLHVMAAIYGVQVAKQLLPFEGETLDFR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
SG +S + + + + +N RYV P+ + + + + FL R
Sbjct: 233 WSGLLSKTEVTRANRTYISTLVNGRYVRNYPLSQAI------------MRGYHTFLPIGR 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P +++ L D+ P K V F + + A +E++++ A
Sbjct: 281 -----FPIVAMHIEMDPILVDVNVHPAKLEVRFSKEQELCAAVEQSVKEA 325
>gi|421846108|ref|ZP_16279258.1| DNA mismatch repair protein [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|411772552|gb|EKS56157.1| DNA mismatch repair protein [Citrobacter freundii ATCC 8090 = MTCC
1658]
Length = 621
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 172/368 (46%), Gaps = 53/368 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ A +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IKKDELALALARHATSKI---ASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQPE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ K + + + + R
Sbjct: 120 AWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIRR 177
Query: 183 IALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ D + E L C + L + IE
Sbjct: 178 IALARFDVTINLSHNGKVVRQYRAVAADGQKERRLGAICGTP----FLEHALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLRGWVADPNHTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKI 354
S +++
Sbjct: 327 LSVLQQQL 334
>gi|334131725|ref|ZP_08505487.1| DNA mismatch repair protein MutL [Methyloversatilis universalis
FAM5]
gi|333443198|gb|EGK71163.1| DNA mismatch repair protein MutL [Methyloversatilis universalis
FAM5]
Length = 596
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 170/355 (47%), Gaps = 31/355 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+ + + + +G V+ V++EL+ NS+DAG+ + V + ++V DD
Sbjct: 1 MPAIRLLPDLLISQIAAGEVVERPASVLKELLENSLDAGSRDIRVQLEAGGVKRLRVADD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R+ L L RHATSK +A +DD + T GFRGEALASI+ V+ + I ++ G
Sbjct: 61 GCGMPREDLPLALARHATSK---IASLDDLEAVATMGFRGEALASIASVARVSITSRETG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ +R +G ++ D GT V DL+YN P RRK++++ + H
Sbjct: 118 SAHAWRIDNEGE------VEPAALDAGTVVDVADLYYNTPARRKFLRTEQTEYGHC-DDV 170
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
RIAL P+V+F+ + + L +S + L+ G E V A+ G +
Sbjct: 171 FGRIALSVPQVAFQLMHNGRLMQRLPAGDMASRVRALL---GDEFMQHARPVEADAGQIR 227
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SG+ + P S + + QY ++N R+V +LL H +A L G R
Sbjct: 228 VSGFAAQPAFSRAGRDAQYCFVNGRFVRD----RLLAHAL--------REAYADVLHGAR 275
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
PAY++ + D+ P KT V F+D V F+ A+ A I
Sbjct: 276 H-----PAYVVFIELDPRAVDVNVHPAKTEVRFRDSRGVHQFVFHAVERALAPSI 325
>gi|344199651|ref|YP_004783977.1| DNA mismatch repair protein mutL [Acidithiobacillus ferrivorans
SS3]
gi|343775095|gb|AEM47651.1| DNA mismatch repair protein mutL [Acidithiobacillus ferrivorans
SS3]
Length = 597
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 175/346 (50%), Gaps = 25/346 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
++RL + N + +G V+ +++EL+ NS+DAGAT++ +++ G + V DDG G
Sbjct: 9 VHRLDSTLANQIAAGEVVERPASILKELLENSLDAGATRITIHLEGGGVDLLSVEDDGVG 68
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I L L ERHATSK+ A +D I T GFRGEAL +I+ VS LEI+++AHG+
Sbjct: 69 IFPADLALAMERHATSKV---ATWEDLQAIHTMGFRGEALPAIASVSRLEIVSRAHGQKQ 125
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
R + G + + GTTV DLF+N P RRK+++S+ + L +K + +
Sbjct: 126 ATRLQVTGGAT--GAPEPSGRAPGTTVRVADLFFNVPARRKFLRSASAE-LSRNQKVLRQ 182
Query: 183 IALVHPKVSFK-FIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
IAL + V+F+ F + + +L + S + S G + + D L +S
Sbjct: 183 IALANFPVAFQLFQNGRALVQLPAALDADSRAQRVASIMGEGFLANALYIEQEDQGLSLS 242
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G++ P + + QY Y+NSR V + P+ + + L AS+ N+ + +
Sbjct: 243 GWLGLPTYNRARGDEQYFYVNSRPV-RDPV--ITHALRASY--------NDVLFQDRH-- 289
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P Y+L L+ P D+ P K V F+D + F+ +R
Sbjct: 290 ----PLYVLYLKLPPERVDVNVHPAKAEVRFRDSREIHDFLFHTLR 331
>gi|218961589|ref|YP_001741364.1| DNA mismatch repair protein MutL [Candidatus Cloacamonas
acidaminovorans]
gi|167730246|emb|CAO81158.1| DNA mismatch repair protein MutL [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 630
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 200/436 (45%), Gaps = 61/436 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L E VRN + +G V+ VV+ELV N++DAGA + V + ++V+D+
Sbjct: 1 MPNIHILAEDVRNKIAAGEVIERPASVVKELVENAIDAGADSIIVAIENGGKDLIRVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ D +L ERH+TSK + ++D T IG+ GFRGEAL SI+ VS L ++T+
Sbjct: 61 GCGMNADDAMLAFERHSTSK---IKTVEDITHIGSLGFRGEALPSIASVSKLHLVTRTAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+++ + + ++GT V R LF + P RRK+++++P + H +K
Sbjct: 118 EEMA--TIVEYANGKLNNVTKTSANIGTAVTVRGLFKDLPARRKFLKTAPVEARHIIKYI 175
Query: 180 VLRIALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ ALV+P++SF+ + D E + + C + S F F D+V +G
Sbjct: 176 HYQ-ALVYPQISFRLVIDDKEKLNYIACPERKQRIEEVFGSGF------FADDVIPVEGK 228
Query: 238 LE---ISGYISSPYDSI-SVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+SGYI D + QY +IN RY+ + + F
Sbjct: 229 YNDYSVSGYIFGLEDRADKLIDAQYTFINGRYIFDKTVRHSIKAAYEPF----------- 277
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA 349
LK + + P Y+L L P D+ P K V F++ VL + +A+R+
Sbjct: 278 ILKTRAWQKGTTPPYILFLEIPPEQIDVNVHPAKLEVRFRENNLVHSLVLETLTKALRNY 337
Query: 350 WMKKIAH--------------DSFDVDM-LEDAELP------------LESSRFQSHQSS 382
+K A S + D+ +++ E+P + F+S QSS
Sbjct: 338 EDQKFASARSKFQGGGKGEKVTSLERDIFVKNIEVPRFSAYKKEFGNLFQDDLFRSEQSS 397
Query: 383 THLHSSPLKNLAKQRD 398
T P+ N A++ +
Sbjct: 398 TSPKDMPIFNPAQEEN 413
>gi|423335912|ref|ZP_17313663.1| DNA mismatch repair protein HexB [Lactobacillus reuteri ATCC 53608]
gi|337729115|emb|CCC04238.1| DNA mismatch repair protein HexB [Lactobacillus reuteri ATCC 53608]
Length = 668
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 181/373 (48%), Gaps = 34/373 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L + N + +G V+ +V+ELV NS+DA + +V + V V+V+DD
Sbjct: 1 MGKIHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + + L RHATSK+ D+ + T GFRGEAL SI+ V+ + + T G
Sbjct: 61 GDGIAAEDISLAFHRHATSKINSRHDL---FKVQTMGFRGEALPSIASVADVTLTTAQAG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ G ++G K L + R+ GT + DLF+N P R KY++ SP+ L +
Sbjct: 118 QEEGTMIHLRGGKELVVKPAGARQ--GTDIKVTDLFFNTPARLKYLK-SPQTELTRITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL +P V+F F + EL + +++ ++ + +G++ + E++ D +
Sbjct: 175 INRLALANPAVAFSF--THNGRELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDDFK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SG++S P + + + + + IN RY+ +++ ++G
Sbjct: 233 VSGFVSLPELTRASRQYITITINHRYIR-------------------NFELTKAIIQGYE 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++N+ L D+ P K V + ++ I IR K+IA +
Sbjct: 274 SKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLMKLIAETIR----KRIAVE 329
Query: 358 SFDVDMLEDAELP 370
+ D+ D +P
Sbjct: 330 NLIPDVDADQFIP 342
>gi|374323832|ref|YP_005076961.1| DNA mismatch repair protein mutL [Paenibacillus terrae HPL-003]
gi|357202841|gb|AET60738.1| DNA mismatch repair protein mutL [Paenibacillus terrae HPL-003]
Length = 704
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 170/355 (47%), Gaps = 26/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I L E + N + +G V+ VV+ELV N++DAG T+V V+V ++V D+
Sbjct: 1 MSKIRVLDEHIANQIAAGEVVERPASVVKELVENAIDAGGTRVDVWVEEGGLQSIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI + + RHATSK+GH D+ T + GFRGEAL SI+ VS +E++T A
Sbjct: 61 GSGIEPEDVETAFYRHATSKIGHGRDLFQIT---SLGFRGEALPSIAAVSKVELLTAAGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ V++G K + +D GT R+LFYN P R KYM++ ++ H +
Sbjct: 118 DGRARKLVIEGGKLVLH--EDAAARQGTDFTVRELFYNTPARLKYMKTIQTELGH-ISDV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL HP+V+F + + LL T + L ++ + +G + +
Sbjct: 175 LYRMALSHPEVAFTL--RHNGNTLLQTLGNGDLLQVIAAVYGTSAAKSMLLLEGESLDYR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISGY+S P + S + +N R+V +++ L KA + L R
Sbjct: 233 ISGYVSRPEWTRSNRNAISTVVNGRFVRSYGLNQAL------------LKAYHTLLPINR 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
P ++ L SL D+ P K V F + +E +I++ +++
Sbjct: 281 -----FPLAVIQLEMHPSLVDVNVHPAKLEVRFSKEAELFQLVEDSIKAVLGQQV 330
>gi|374995725|ref|YP_004971224.1| DNA mismatch repair protein MutL [Desulfosporosinus orientis DSM
765]
gi|357214091|gb|AET68709.1| DNA mismatch repair protein MutL [Desulfosporosinus orientis DSM
765]
Length = 650
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 166/342 (48%), Gaps = 28/342 (8%)
Query: 13 NTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSGISRDGLVLL 71
N + +G V+ VV+ELV NS+DAGA + + + G ++V DDGSGI R L L
Sbjct: 14 NQIAAGEVVERPASVVKELVENSLDAGAKHIDITIEGNGVPLIRVRDDGSGIGRADLPLA 73
Query: 72 GERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKGS 131
RHATSK+ + D+D + T GFRGEAL SI+ VS EI ++ G +KG
Sbjct: 74 VIRHATSKITQIEDLDH---LQTLGFRGEALPSIASVSHFEISSRPEYEEAGLSFTLKGG 130
Query: 132 KCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKVS 191
+ G+ + VGT+V RDLF+N P R K+++S+ + + V RIAL HP+++
Sbjct: 131 E--EEGLTEIGCPVGTSVTVRDLFFNTPARLKFLKSTATE-FGLISDTVGRIALAHPEIA 187
Query: 192 FKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGALEISGYISSPYDS 250
I + +++ + L I + G + L + +D + G+IS P
Sbjct: 188 ---ISLTHPQQVVLQTTGRGDLREAIGAVIGYDLARQLIPIQMSDEKWRLEGFISPPNLV 244
Query: 251 ISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLL 310
S K Q+ +N R + + P+ L LA + K + P +L
Sbjct: 245 RSSKQAQFFMVNGR-IIRSPL--LSRALAEGYHTLIPAKHH--------------PIAVL 287
Query: 311 NLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
++ P S YD+ P K V FKD + FI A+ +A ++
Sbjct: 288 HVSLPPSEYDVNVHPTKMDVRFKDEAGLSQFIREAVNAALLR 329
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 82/203 (40%), Gaps = 33/203 (16%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP-- 1226
L Q+ +I G L +IDQHAA ERI E L + + S Q L++P
Sbjct: 465 LTQLFNTYILATDGKILTIIDQHAAHERINYERLLREFKEADQPS-------QVLLIPIP 517
Query: 1227 -EIGYQLLQNFAEQIKDWGWICN-----IHTQGSRSFNKNLNLLQRQITVITLLAVPCIF 1280
E Q Q E + WI N + GSR++ L +P
Sbjct: 518 MEFTVQEEQVLLENL----WILNEMGFILEQFGSRTY--------------LLRGIPVQT 559
Query: 1281 GVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEEL 1340
G +D L +F++++ + T + + AC+ +I DSL E ++ L
Sbjct: 560 GNFPADELLRQFIEEVLIKNSPPTFDKMIEEWIYMLACKESIKARDSLNTHEMEQLIAAL 619
Query: 1341 KQTSLCFQCAHGRPTTVPLVNLE 1363
+T + C HGRPT V + E
Sbjct: 620 GRTHNPYTCPHGRPTMVTMTRSE 642
>gi|448633065|ref|ZP_21674063.1| DNA mismatch repair protein MutL [Haloarcula vallismortis ATCC
29715]
gi|445752422|gb|EMA03846.1| DNA mismatch repair protein MutL [Haloarcula vallismortis ATCC
29715]
Length = 717
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 163/369 (44%), Gaps = 40/369 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + + +G V+ VV+ELV N++DA A +V V V ++V DD
Sbjct: 1 MTDIQRLDDRTVERIAAGEVVERPASVVKELVENAIDADANRVEVVVEAGGTDGIRVTDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ RD + E+H TSK+ +AD++ G+GT GFRGEAL +I VS L + T+ G
Sbjct: 61 GVGMDRDAVKTAVEKHTTSKIRDIADLE--GGVGTLGFRGEALHAIGAVSRLTVRTRPRG 118
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G V++G +G + GTT+ DLFYN P RRKY++ + H V
Sbjct: 119 GDVGTELVLEGGDVTSVGPAGCPE--GTTIAVEDLFYNVPARRKYLKQESTEFAH-VNTV 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN----- 234
V AL +P V+ + E T ++S +G E + V A
Sbjct: 176 VASYALANPDVAVSL--THGDRETFSTTGQGDLRETVMSVYGREVAESMISVGAGSGANA 233
Query: 235 ---------DGALE-ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDC 284
DG L+ + G +S P + + + + Y+N RYV G + A D
Sbjct: 234 GDDETDSFPDGPLDGVHGLVSHPETNRAGREYLSTYVNGRYVRAGTVRD------AVIDA 287
Query: 285 SDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIER 344
+ A + + P +L L P D+ P K V F D E V +
Sbjct: 288 YGTQIAPDRY-----------PFAVLFLDVPAGDVDVNVHPRKLEVRFADDEGVREQVRT 336
Query: 345 AIRSAWMKK 353
A+ A +++
Sbjct: 337 AVEDALLRE 345
Score = 41.2 bits (95), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 1155 PDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSV 1214
P++ ++S L ++L Q+ ++ L ++DQHAADER+ E L+ K GE +
Sbjct: 509 PEATHES-LPSMRILGQLADTYVVAETDDGLVLVDQHAADERVNYERLKAK-FEGETTTQ 566
Query: 1215 AYLD-AEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI-TVIT 1272
A D E EL E ++ ++ + G+ HT +R+ +++ + R + VI
Sbjct: 567 ALADPVELELTAREA--EVFDRRSDALASLGF----HT--ARTGERSVEV--RTLPGVIA 616
Query: 1273 LLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSE 1332
+A P I + DV L F+ D + ++T + +L AC ++ SL
Sbjct: 617 DVAGPDI----VRDV-LGAFV--AGDDEAAATVEAAADELLGDLACYPSVTGNTSLTEGS 669
Query: 1333 CALIVEELKQTSLCFQCAHGRPTTV 1357
++ L + + C HGRPT +
Sbjct: 670 VRELLAALDECENPYACPHGRPTVI 694
>gi|365104308|ref|ZP_09333969.1| DNA mismatch repair protein mutL [Citrobacter freundii 4_7_47CFAA]
gi|363644921|gb|EHL84202.1| DNA mismatch repair protein mutL [Citrobacter freundii 4_7_47CFAA]
Length = 624
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 172/368 (46%), Gaps = 53/368 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ A +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IKKDELALALARHATSKI---ASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQPE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ K + + + + R
Sbjct: 120 AWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIRR 177
Query: 183 IALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ D + E L C + L + IE
Sbjct: 178 IALARFDVTINLSHNGKVVRQYRAVAADGQKERRLGAICGTP----FLEHALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLRGWVADPNHTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKI 354
S +++
Sbjct: 327 LSVLQQQL 334
>gi|339009510|ref|ZP_08642082.1| DNA mismatch repair protein MutL [Brevibacillus laterosporus LMG
15441]
gi|338773988|gb|EGP33519.1| DNA mismatch repair protein MutL [Brevibacillus laterosporus LMG
15441]
Length = 752
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 169/350 (48%), Gaps = 26/350 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E V N + +G V+ VV+ELV N++DAG ++V +++ +++VD+
Sbjct: 1 MGKIQVLTEQVSNMIAAGEVVERPASVVKELVENAIDAGTSQVEIHIEEGGLQLIRIVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R+ + ERHATSK+ D+ I + GFRGEALASI+ VS +E+++
Sbjct: 61 GVGMDREDCLRAFERHATSKIRSARDL---FHIRSLGFRGEALASIASVSRIELMSAEDS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + V+ G ++D + GT +V RDLF+N P R KYM+S +V H V
Sbjct: 118 GQVGTKVVIDGGDM--KSVEDLARVKGTEIVVRDLFFNTPARLKYMRSISTEVGH-VSDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+A+ +PK++F + LL T L ++ + +G++ L
Sbjct: 175 VNRLAITYPKIAFTLT--HNGKNLLQTSGDGKLLHVMAAIYGVQVAKQLLPFEGETLDFR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
SG +S + + + + +N RYV P+ + + + + FL R
Sbjct: 233 WSGLLSKTEVTRANRTYISTLVNGRYVRNYPLSQAI------------MRGYHTFLPIGR 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P +++ L D+ P K V F + + A +E++++ A
Sbjct: 281 -----FPIVAMHIEMDPILVDVNVHPAKLEVRFSKEQELCAAVEQSVKEA 325
>gi|357061465|ref|ZP_09122217.1| hypothetical protein HMPREF9332_01775 [Alloprevotella rava F0323]
gi|355373953|gb|EHG21256.1| hypothetical protein HMPREF9332_01775 [Alloprevotella rava F0323]
Length = 605
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 204/448 (45%), Gaps = 38/448 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVY-VGVCNCYVKVVDDGSG 62
I+ LP+ V N + +G V+ + V++ELV NS+DAGA + VY V ++V+D+G G
Sbjct: 5 IHLLPDTVANQIAAGEVIQRPSSVIKELVENSIDAGAALIQVYVVEAGKTSIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEAL SI V+ +E+ T+ +
Sbjct: 65 MSETDARLAFERHATSKIREASDL---FNLCTMGFRGEALPSIVAVAQVELRTRQKDKEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERK---DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G ++G K +E+ +G + R+LF+N P RRK+++S+ + L ++ +
Sbjct: 122 GICLQVEGGK-----FKEEQLVACPIGANFMVRNLFFNVPARRKFLKSNQTE-LSNIVQE 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
RIAL HP VSFK + S L+ S + + FG + L + A+ +
Sbjct: 176 FERIALAHPAVSFK---LYSNGTLMHDLVSGNFRQRISGVFGRKMDQQLIPICADTEIAK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G++ P S QY ++N R+ + H S KA
Sbjct: 233 ITGFVGCPESSRKKGVRQYFFVNGRF---------MRHPYFS-------KAVQSAFDRLI 276
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
+++ P Y LN D+ P KT V F+D + + I +R A K A +
Sbjct: 277 PENEQVP-YFLNFEVDPQRIDVNIHPTKTEVKFQDEQELWQIILAGVRDALSKFNAVPTI 335
Query: 360 DVDMLEDAELPLESSRFQSHQSSTHLHSS--PLKNLAKQRDHMFHKECERI--TFQEFQK 415
D D +LP+ Q H+ + P K A R + +E R + QK
Sbjct: 336 DFDTDNRPQLPVFDETIPVQQPRVHIDHTFNPFKESAS-RKTSWEEEYNRAFGLNRSVQK 394
Query: 416 DPVELAEENTEMEFFSQPKHSSSLLDGS 443
P +EN +++ + S + G+
Sbjct: 395 QPSLWEQENEKLQTITNDISSVTEFSGT 422
>gi|194468324|ref|ZP_03074310.1| DNA mismatch repair protein MutL [Lactobacillus reuteri 100-23]
gi|194453177|gb|EDX42075.1| DNA mismatch repair protein MutL [Lactobacillus reuteri 100-23]
Length = 668
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 181/373 (48%), Gaps = 34/373 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L + N + +G V+ +V+ELV NS+DA + +V + V V+V+DD
Sbjct: 1 MGKIHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + + L RHATSK+ D+ + T GFRGEAL SI+ V+ + + T G
Sbjct: 61 GDGIAAEDISLAFHRHATSKINSRHDL---FKVQTMGFRGEALPSIASVADVTLTTAQAG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ G ++G K L + R+ GT + DLF+N P R KY++ SP+ L +
Sbjct: 118 QEEGTMIHLRGGKELVVKPAGARQ--GTDIKVTDLFFNTPARLKYLK-SPQTELTRITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL +P V+F F + EL + +++ ++ + +G++ + E++ D +
Sbjct: 175 INRLALANPAVAFSF--THNGRELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDDFK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SG++S P + + + + + IN RY+ +++ ++G
Sbjct: 233 VSGFVSLPELTRASRQYITITINHRYIR-------------------NFELTKAIIQGYE 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++N+ L D+ P K V + ++ I IR K+IA +
Sbjct: 274 SKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLIKLIAETIR----KRIAVE 329
Query: 358 SFDVDMLEDAELP 370
+ D+ D +P
Sbjct: 330 NLIPDVDADQFIP 342
>gi|429111757|ref|ZP_19173527.1| DNA mismatch repair protein MutL [Cronobacter malonaticus 507]
gi|426312914|emb|CCJ99640.1| DNA mismatch repair protein MutL [Cronobacter malonaticus 507]
Length = 635
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 181/380 (47%), Gaps = 37/380 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G+G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGAG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMEVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GALE 239
IAL V+ ++P + S I +FL++ A + G L
Sbjct: 178 IALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEQALAIEWQHGDLA 235
Query: 240 ISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 236 LRGWVAEPKGTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQQ----- 285
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 286 -------PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLHQQAANP 337
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+ EDA RFQ
Sbjct: 338 LLLDEPAEDA------PRFQ 351
>gi|424899665|ref|ZP_18323207.1| DNA mismatch repair protein MutL [Prevotella bivia DSM 20514]
gi|388591865|gb|EIM32104.1| DNA mismatch repair protein MutL [Prevotella bivia DSM 20514]
Length = 647
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 174/370 (47%), Gaps = 29/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGAT--KVFVYVGVCNCYVKVVDDGS 61
I LP++V N + +G V+ V++EL+ NSVDAGAT KV V V ++VVD+G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELIENSVDAGATIIKVLV-VDAGRTSIQVVDNGK 63
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+S L ERHATSK + DD + T GFRGEALASI+ V+ +E+ T+ G
Sbjct: 64 GMSEIDARLSFERHATSK---IRKADDLFSLHTMGFRGEALASIAAVAQVELKTRIEGDE 120
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
G + G ++G + + VG+ + +LF+N P RRK+++S+ + L+++
Sbjct: 121 LGCHLSISGGS--FVGQEPCQCAVGSNFLIENLFFNVPARRKFLKSNTTE-LNNIITAFQ 177
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
RIALV+P ++F ++E L CS ++ FG L V I
Sbjct: 178 RIALVYPSITFTLHSNDTEMFNLHACSFKQR---IVEIFGKRLSHELLPVEVETTLCNIH 234
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G++ P S A QY+++N RY+ HK + A +
Sbjct: 235 GFVGKPESSKKKGAHQYLFVNDRYMKHPYFHKAI------------MSAYERLIPQGEQV 282
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 361
S Y + P D+ P KT + F++ + + + A+R A K + D
Sbjct: 283 S-----YFIYFNVPAEDIDVNIHPTKTEIKFENEQAIWQILMAAVRDAIGKFHDVSAIDF 337
Query: 362 DMLEDAELPL 371
D ++P+
Sbjct: 338 DTEGRPDIPV 347
>gi|293393216|ref|ZP_06637531.1| DNA mismatch repair protein MutL [Serratia odorifera DSM 4582]
gi|291424362|gb|EFE97576.1| DNA mismatch repair protein MutL [Serratia odorifera DSM 4582]
Length = 627
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 170/349 (48%), Gaps = 32/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + L L RHATSK ++ +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IGKADLALALARHATSK---ISTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTAEQPE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + VG+TV DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEGRDQAVM-VKPAAHPVGSTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDEVNA---NDGAL 238
IAL V+ I++ +L+ ++ + G I +FL A G L
Sbjct: 178 IALARFDVA---INLSHNGKLMRQYRAAKEESQHERRLGSICGPAFLQHALAISWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P + + QY Y+NSR + +L+NH A D K +
Sbjct: 235 TIRGWVADPAGARQLGELQYCYVNSRMMRD----RLINH-AIRQAYQDQLKDDQQ----- 284
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 285 -------PAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|307243917|ref|ZP_07526042.1| DNA mismatch repair protein, C-terminal domain protein
[Peptostreptococcus stomatis DSM 17678]
gi|306492739|gb|EFM64767.1| DNA mismatch repair protein, C-terminal domain protein
[Peptostreptococcus stomatis DSM 17678]
Length = 686
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 179/358 (50%), Gaps = 36/358 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M IN L ++ N + +G V+ + +++E+V NS+DAGA + + + +KV+DD
Sbjct: 1 MTRINILDDSTINKIAAGEVIERPSSIIKEVVENSLDAGAKNITIQIENAGKDMIKVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G+GI D + RHATSK+ D+ + + + GFRGEALASI+ +S ++++TK
Sbjct: 61 GAGIEADDINKAFLRHATSKIRRAEDL---SNLHSLGFRGEALASIAAISKVDMVTKTED 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERK-----DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G R ++ G K E K + GT ++ +DLFYN P RRK+++S+ ++++
Sbjct: 118 ALMGTRILINGGKI-------ESKNPIGANRGTQLIVKDLFYNVPARRKFLKSNHAEIIN 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ V ++A+ +P VS K+I+ + + T S+ + +G + L +++
Sbjct: 171 -ITDLVNKLAIGNPGVSIKYIN--NGKTIFETIGDSNLYNAIRMIYGKDTSDHLIKIDYQ 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
+I GYI++ S + Q ++IN RYV K P ++N + +++ D N
Sbjct: 228 SSYYKIDGYIANNNVYRSNRNNQLIFINGRYV-KSP--NIMNAINSAY--KDIIPIN--- 279
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P Y +NL D+ P K V F + P+L + +R +K
Sbjct: 280 ---------KYPVYFINLEIDPGKIDVNIHPSKLEVKFDNEGPILEDLGDYVRGTLLK 328
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 22/189 (11%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L ++DQHAA ER+R E + K + + YL + L ++ + + +G
Sbjct: 513 LYMMDQHAAHERVRFE-MYMKSFKSDSIRIQYLLDPIIMDLSPTDMEVAIRNIDLFERYG 571
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSS- 1303
+I + G ++ I++ +P FG S+ + E + + D D SS
Sbjct: 572 FI--VEAFGHKN--------------ISVRGLPNTFGRPESEKFIYELIDKFLDLDKSSK 615
Query: 1304 --TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV- 1360
+ S + AC+ AI D L +E ++E LK+ + C HGRP V +
Sbjct: 616 RDSIYDSKYDQIAEMACKSAIKANDKLDYNEVMALLESLKKCDNPYTCPHGRPVMVSMTK 675
Query: 1361 -NLEALHKQ 1368
++E + K+
Sbjct: 676 YDIEKMFKR 684
>gi|146297976|ref|YP_001192567.1| DNA mismatch repair protein MutL [Flavobacterium johnsoniae UW101]
gi|189030399|sp|A5FNH2.1|MUTL_FLAJ1 RecName: Full=DNA mismatch repair protein MutL
gi|146152394|gb|ABQ03248.1| DNA mismatch repair protein MutL [Flavobacterium johnsoniae UW101]
Length = 644
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 169/345 (48%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDA AT + + V+V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAVDAKATDIKLIIKDAGKSLVQVIDNGVG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ L RHATSK+ D+ +GT GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MTVTDARLCFARHATSKIRQAEDL---FSLGTKGFRGEALASIAAIAHMEMKTKQEQDEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V++GSK + + K GT+ ++LF+N P RR +++S + H V R
Sbjct: 122 GTHIVIEGSKFVSQEVAVLPK--GTSFAVKNLFFNIPARRNFLKSDTVEFRH-VMDEFQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP + F F SE L + ++S E L VN + + I G
Sbjct: 179 VALAHPNIHFSFYHNGSELYNLPAAGYRQRIVGIMSGKTNEK---LVPVNEDTEIISIQG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + + Q+ ++N R++ G +H + + A++D G LK
Sbjct: 236 FVCKPEFAKKNRGEQFFFVNDRFIKSGYLH---HAVMAAYD---------GLLKDG---- 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ P+Y L L+ P + D+ P KT + F D + + A + +I+
Sbjct: 280 -SQPSYFLYLQVPPNTIDINIHPTKTEIKFDDEQALYAILRASIK 323
>gi|383787509|ref|YP_005472078.1| DNA mismatch repair protein MutL [Fervidobacterium pennivorans DSM
9078]
gi|383110356|gb|AFG35959.1| DNA mismatch repair protein MutL [Fervidobacterium pennivorans DSM
9078]
Length = 616
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 157/274 (57%), Gaps = 15/274 (5%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I +LPE V + + +G V+ + VV+ELV NS+DAGA+ + V + Y+KV D+GSG
Sbjct: 7 IIKLPEEVVSKIAAGEVVVNPASVVKELVENSIDAGASNIEVQIKDGGKSYIKVSDNGSG 66
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S++ L+L +R+ TSK ++ ++D I ++GFRGEALASI +VS L +IT ++G +
Sbjct: 67 MSKEDLLLAVQRYTTSK---ISSIEDIYNITSYGFRGEALASIGEVSRL-VITTSNGNES 122
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
+++ G + + + ++ GTTV DLF+N P RRK++ SS K V + + R
Sbjct: 123 NKLEMVGGK---VVRVSETLRERGTTVEVFDLFFNIPARRKFL-SSEKIERRMVTEVIER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSF-GIEDFSFLDEVNANDGALEIS 241
L P++ F F + ++E++ SS+ L F ++ F ++ + DG + +S
Sbjct: 179 FLLTKPEIKFLF---KVDNEIIYNAPSSNLLERFKLIFPEVKSFEIIE--DCKDGIIRVS 233
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLL 275
G ISSP ++ Q ++N R+V +H L
Sbjct: 234 GIISSPQFFRKNRSGQLFFVNGRFVLDNLLHIAL 267
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 1155 PDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSV 1214
P ++ + LE + ++I + ++D HAA ERI E+L+ + V
Sbjct: 422 PHVVSPTNLEKVGEFTIIKNRYILFEDSDGIVIVDFHAAHERIIYEQLKERQFQ-----V 476
Query: 1215 AYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLL 1274
L E + + +L++ ++K+ G+ ++ T+ S + K + L
Sbjct: 477 VNLLIPVEFSIGKSLASVLESLENELKELGF--SLETEKSENSVK-----------VVLK 523
Query: 1275 AVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECA 1334
++P + + + L+E L++ P S+L VL SKAC+ A+ GD L E
Sbjct: 524 SIPSLLKITQAQETLIEMLEEYRI---PFNKPRSILHVLASKACKTAVKTGDKLSVDEAK 580
Query: 1335 LIVEELKQTSLCFQCAHGRPTTVPL 1359
++++E+K+ +L C HGRP + +
Sbjct: 581 MLLDEIKRRNL-LTCPHGRPIMMKI 604
>gi|313127387|ref|YP_004037657.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
gi|448288139|ref|ZP_21479340.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
gi|312293752|gb|ADQ68212.1| DNA mismatch repair protein MutL [Halogeometricum borinquense DSM
11551]
gi|445570178|gb|ELY24744.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
Length = 787
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 177/365 (48%), Gaps = 37/365 (10%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGS 61
TI L + N + +G V+ VV+ELV NS+DA A ++ V V V+V DDG
Sbjct: 8 TIRALDDQTINRIAAGEVVERPASVVKELVENSLDADANRISVAVDSGGTEGVRVRDDGV 67
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+ R+ L + E H TSK+ + D++ +G+GT GFRGEAL +IS VS L + +K G
Sbjct: 68 GMDREDLQMAVEEHTTSKISDINDLE--SGVGTLGFRGEALHTISAVSRLTVRSKPRGGD 125
Query: 122 NGYRKVMKGSKC-LYLGID-DERKDV-------GTTVVSRDLFYNQPVRRKYMQSSPKKV 172
G G+ L ++ E DV GT V DLFYN P R+K+++++ +
Sbjct: 126 TGRGSDAPGNDAGTELRVEGGEVTDVRPAGCPEGTVVEVEDLFYNTPARKKFLKTTATEF 185
Query: 173 LHSVKKCVLRIALVHPKVSFKFIDMESED-ELLCTCSSSSPLALLISSFGIEDFSFLDEV 231
H V V + AL +P+V+ I +E +D E+ T S + ++S +G E + V
Sbjct: 186 DH-VNTVVTQYALANPEVA---ISLEHDDREVFATEGRGSLESTVLSVYGREVAESMTRV 241
Query: 232 --NANDGAL-EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSW 288
+DG + ++G +S P + S + + ++N RYV + + +
Sbjct: 242 EHEPDDGPVASVTGLVSHPETTRSARDYLSTFVNDRYVTARVLREAV------------L 289
Query: 289 KANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
A G L R P +L + P + D+ P K V F D V + +E A+ S
Sbjct: 290 DAYGGQLATDR-----YPFAVLFVDVPPNTVDVNVHPRKMEVRFDDESGVKSAVESAVES 344
Query: 349 AWMKK 353
A +++
Sbjct: 345 ALLEQ 349
Score = 43.5 bits (101), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 23/200 (11%)
Query: 1162 CLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLD-AE 1220
L +VL Q+ +I + +IDQHAADER+ E L+ + L+G+ + A D E
Sbjct: 583 TLPSMRVLGQLLDTYIVAETADGMVLIDQHAADERVNYERLQRE-LAGDVTTQALADPVE 641
Query: 1221 QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF 1280
EL E L + + + + G+ + G R+ + + +VP +F
Sbjct: 642 MELTAREAA--LFEEYQDALAQTGF--HAGRTGERT--------------VEVRSVPAVF 683
Query: 1281 GVNLSDVDLLEFLQQLAD--TDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIV 1337
L L + L DG T +V +L AC ++ SL ++
Sbjct: 684 AEALRPELLRDALTAFVSEGEDGGRETVDAVADELLADLACYPSVTGNTSLTEGSVLDLL 743
Query: 1338 EELKQTSLCFQCAHGRPTTV 1357
L + C HGRP +
Sbjct: 744 SALDDCENPYACPHGRPVVI 763
>gi|319954280|ref|YP_004165547.1| DNA mismatch repair protein mutl [Cellulophaga algicola DSM 14237]
gi|319422940|gb|ADV50049.1| DNA mismatch repair protein MutL [Cellulophaga algicola DSM 14237]
Length = 617
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 183/372 (49%), Gaps = 35/372 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGA--TKVFVYVGVCNCYVKVVDDGS 61
I LP+ V N + +G V+ VV+EL+ N++DAGA K+ + G ++VVD+G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGADAIKLIIKDG-GKALIQVVDNGV 63
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+S L ERHATSK+ DD + T GFRGEALASI+ ++ +E++T+
Sbjct: 64 GMSATDARLSFERHATSKI---KSADDLFCLHTKGFRGEALASIAAIAHVELLTRTATDE 120
Query: 122 NGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + ++GSK I + V GT+ ++LF+N P RR +++S+ + H +
Sbjct: 121 IGVQLKVEGSK-----ISSQEPTVTPKGTSFCVKNLFFNIPARRNFLKSNQVEFRH-ITD 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
R+AL HP + F F + SE + S+ +++ FG + L V +
Sbjct: 175 EFHRVALAHPDIQFHFYNNGSE---IFHLPKSNYRQRIVNVFGAKTNEKLVPVEEETQVV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ISG+IS P S + Q+ ++N+R++ K P L+H S A G +
Sbjct: 232 KISGFISKPEFSKKSRGEQFFFVNNRFI-KSP---YLHHAVVS--------AFEGLI--- 276
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
KS+ P Y L L + D+ P KT + F D V A + AI+ A + +
Sbjct: 277 --KSENHPGYFLYLDVDPASIDINIHPTKTEIKFDDEHTVYALLRSAIKHALGQFNVVPA 334
Query: 359 FDVDMLEDAELP 370
D + ++ E P
Sbjct: 335 LDFEADQNLETP 346
>gi|373111568|ref|ZP_09525823.1| DNA mismatch repair protein mutL [Myroides odoratimimus CCUG 10230]
gi|371640235|gb|EHO05840.1| DNA mismatch repair protein mutL [Myroides odoratimimus CCUG 10230]
Length = 761
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ + VV+EL+ NSVDAGAT++ + ++V+D+G G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPSSVVKELIENSVDAGATEIKLILKEAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + +D + T GFRGEALASI+ ++ +E+ T+ H
Sbjct: 65 MSDVDARMSFERHATSKI---SKAEDLFALSTKGFRGEALASIAAIAHVELKTRTHEAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V++G+K + + GT+ ++LF+N P RR +++S + + + + R
Sbjct: 122 GTHIVIEGTKLVSQEV--AVTPAGTSFSVKNLFFNIPARRNFLKSDNVEFRNIIDEFE-R 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I LVH + F I SE + ++ +++ FG L + N +E++G
Sbjct: 179 IVLVHHNIHFSLIHNGSE---VFNLLPTNARQRIVNVFGTRTNEKLVPIKENTEIVEVTG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + + Q+ ++N R+V G +H + A G L K
Sbjct: 236 FVGKPEFAKKSRGEQFFFVNDRFVKSGYLHHAI------------MAAYEGLL-----KE 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P+Y + P D+ P KT V F D + + + + I+
Sbjct: 279 GTHPSYFIYFNVPPDSIDINIHPTKTEVKFDDEQALYSILRSIIK 323
>gi|282859618|ref|ZP_06268721.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella
bivia JCVIHMP010]
gi|282587621|gb|EFB92823.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella
bivia JCVIHMP010]
Length = 581
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 174/370 (47%), Gaps = 29/370 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGAT--KVFVYVGVCNCYVKVVDDGS 61
I LP++V N + +G V+ V++EL+ NSVDAGAT KV V V ++VVD+G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELIENSVDAGATIIKVLV-VDAGRTSIQVVDNGK 63
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+S L ERHATSK + DD + T GFRGEALASI+ V+ +E+ T+ G
Sbjct: 64 GMSEIDARLSFERHATSK---IRKADDLFSLHTMGFRGEALASIAAVAQVELKTRIEGDE 120
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
G + G ++G + + VG+ + +LF+N P RRK+++S+ + L+++
Sbjct: 121 LGCHLSISGGS--FVGQEPCQCAVGSNFLIENLFFNVPARRKFLKSNTTE-LNNIITAFQ 177
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
RIALV+P ++F ++E L CS ++ FG L V I
Sbjct: 178 RIALVYPSITFTLHSNDTEMFNLHACSFKQR---IVEIFGKRLSHELLPVEVETTLCNIH 234
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G++ P S A QY+++N RY+ HK + A +
Sbjct: 235 GFVGKPESSKKKGAHQYLFVNDRYMKHPYFHKAI------------MSAYERLIPQGEQV 282
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDV 361
S Y + P D+ P KT + F++ + + + A+R A K + D
Sbjct: 283 S-----YFIYFNVPAEDIDVNIHPTKTEIKFENEQAIWQILMAAVRDAIGKFHDVSAIDF 337
Query: 362 DMLEDAELPL 371
D ++P+
Sbjct: 338 DTEGRPDIPV 347
>gi|423135656|ref|ZP_17123302.1| DNA mismatch repair protein mutL [Myroides odoratimimus CIP 101113]
gi|371640760|gb|EHO06356.1| DNA mismatch repair protein mutL [Myroides odoratimimus CIP 101113]
Length = 761
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ + VV+EL+ NSVDAGAT++ + ++V+D+G G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPSSVVKELIENSVDAGATEIKLILKEAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + +D + T GFRGEALASI+ ++ +E+ T+ H
Sbjct: 65 MSDVDARMSFERHATSKI---SKAEDLFALSTKGFRGEALASIAAIAHVELKTRTHEAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V++G+K + + GT+ ++LF+N P RR +++S + + + + R
Sbjct: 122 GTHIVIEGTKLVSQEV--AVTPAGTSFSVKNLFFNIPARRNFLKSDNVEFRNIIDEFE-R 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I LVH + F I SE + ++ +++ FG L + N +E++G
Sbjct: 179 IVLVHHNIHFSLIHNGSE---VFNLLPTNARQRIVNVFGTRTNEKLVPIKENTEIVEVTG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + + Q+ ++N R+V G +H + A G L K
Sbjct: 236 FVGKPEFAKKSRGEQFFFVNDRFVKSGYLHHAI------------MAAYEGLL-----KE 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P+Y + P D+ P KT V F D + + + + I+
Sbjct: 279 GTHPSYFIYFNVPPDSIDINIHPTKTEVKFDDEQALYSILRSIIK 323
>gi|423330080|ref|ZP_17307880.1| DNA mismatch repair protein mutL [Myroides odoratimimus CCUG 3837]
gi|404602552|gb|EKB02248.1| DNA mismatch repair protein mutL [Myroides odoratimimus CCUG 3837]
Length = 761
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ + VV+EL+ NSVDAGAT++ + ++V+D+G G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPSSVVKELIENSVDAGATEIKLILKEAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + +D + T GFRGEALASI+ ++ +E+ T+ H
Sbjct: 65 MSDVDARMSFERHATSKI---SKAEDLFALSTKGFRGEALASIAAIAHVELKTRTHEAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V++G+K + + GT+ ++LF+N P RR +++S + + + + R
Sbjct: 122 GTHIVIEGTKLVSQEV--AVTPAGTSFSVKNLFFNIPARRNFLKSDNVEFRNIIDEFE-R 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I LVH + F I SE + ++ +++ FG L + N +E++G
Sbjct: 179 IVLVHHNIHFSLIHNGSE---VFNLLPTNARQRIVNVFGTRTNEKLVPIKENTEIVEVTG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + + Q+ ++N R+V G +H + A G L K
Sbjct: 236 FVGKPEFAKKSRGEQFFFVNDRFVKSGYLHHAI------------MAAYEGLL-----KE 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P+Y + P D+ P KT V F D + + + + I+
Sbjct: 279 GTHPSYFIYFNVPPDSIDINIHPTKTEVKFDDEQALYSILRSIIK 323
>gi|340619655|ref|YP_004738108.1| DNA mismatch repair protein MutL [Zobellia galactanivorans]
gi|339734452|emb|CAZ97829.1| DNA mismatch repair protein MutL [Zobellia galactanivorans]
Length = 618
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 174/346 (50%), Gaps = 29/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGAT--KVFVYVGVCNCYVKVVDDGS 61
I LP+ V N + +G V+ VV+EL+ N++DAGAT K+ + G ++VVDDG
Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATTIKLIIKEG-GKILIQVVDDGM 63
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+S L ERHATSK+ D+ + + T GFRGEALASI+ ++ +E+ T+
Sbjct: 64 GMSATDARLSFERHATSKIQKAEDLFN---LNTKGFRGEALASIAAIAHVEMQTRPETEE 120
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
G ++GSK ++ K GT++ ++LF+N P RR +++S+ ++ H +
Sbjct: 121 LGTHIKIEGSKIIFQEASVTPK--GTSMAVKNLFFNIPARRNFLKSNQVELRH-ITDEFH 177
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
R+AL HP ++F F + +E L S + +++ FG L V ++I
Sbjct: 178 RVALAHPSIAFHFYNNGNE---LFNLPSDNYRKRIVNIFGSRTNQKLVPVEEETPIVKIK 234
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G+I+ P + + Q+ +IN+R++ +H + + A+F+ G + K
Sbjct: 235 GFITKPEFAKKSRGEQFFFINNRFIKSPYLH---HAVVAAFE---------GLI-----K 277
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
S + P Y L L D+ P KT V F D + A + ++
Sbjct: 278 SDSYPGYFLYLEVDPGSIDINIHPTKTEVKFDDEHSLYAILRSTVK 323
>gi|417789491|ref|ZP_12437135.1| DNA mismatch repair protein [Cronobacter sakazakii E899]
gi|449306692|ref|YP_007439048.1| DNA mismatch repair protein [Cronobacter sakazakii SP291]
gi|333956397|gb|EGL74056.1| DNA mismatch repair protein [Cronobacter sakazakii E899]
gi|449096725|gb|AGE84759.1| DNA mismatch repair protein [Cronobacter sakazakii SP291]
Length = 635
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 183/380 (48%), Gaps = 37/380 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G+G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGAG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMEVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GALE 239
IAL V+ ++P + S I +FL+ A + G L
Sbjct: 178 IALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEHALAIEWQHGDLA 235
Query: 240 ISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 236 LRGWVAEPKGTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQ------ 284
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 285 ------QPAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAAN- 336
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+ + E AE ++ RFQ
Sbjct: 337 --PLSLNEPAE---DAPRFQ 351
>gi|268611652|ref|ZP_06145379.1| DNA mismatch repair protein MutL [Ruminococcus flavefaciens FD-1]
Length = 677
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 175/359 (48%), Gaps = 38/359 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M IN L + + + +G V+ + V++ELV NS+D+GA + V + Y++V DD
Sbjct: 1 MPPINILSKEISELIAAGEVIERPSSVIKELVENSIDSGARHITVEIKNGGTTYMRVTDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + RHATSK+ D+D+ I T GFRGEALAS++ V+ +E++TK
Sbjct: 61 GCGMSFGDVPKAFLRHATSKITAKEDLDN---ILTLGFRGEALASVAAVARVEVLTKQRE 117
Query: 120 RPNGYRKVMKGSKCLY---LGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++GS+ G D GTT++ RDLFYN P R+K+M+ + ++V
Sbjct: 118 DALGTLYAIEGSEEKAHEESGCPD-----GTTIIIRDLFYNVPARQKFMKKDVTEA-NAV 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSF-LDEVNAND 235
+ +I + HP V+FK I ++ + S L + + DF+ L EV+
Sbjct: 172 SNILQKITMSHPDVAFKLI---RDNRVEFNSSGDGELFSAVYAVYGRDFARDLMEVDYEY 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA--NNG 293
+ + GY+ P S + +AFQ ++N RYV S CS + + N
Sbjct: 229 EGIHVGGYVIKPLYSKNNRAFQNFFVNGRYV-------------RSKLCSSALENAYTNM 275
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
+ GK PA +L + P D+ P K V F + V + A+++A MK
Sbjct: 276 MMTGK------FPACVLMIDLPPVAMDVNIHPTKAEVRFTNERNVSDAVYFAVKNAMMK 328
>gi|389839482|ref|YP_006341566.1| DNA mismatch repair protein [Cronobacter sakazakii ES15]
gi|387849958|gb|AFJ98055.1| DNA mismatch repair protein [Cronobacter sakazakii ES15]
Length = 635
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 183/380 (48%), Gaps = 37/380 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G+G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGAG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMEVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GALE 239
IAL V+ ++P + S I +FL+ A + G L
Sbjct: 178 IALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEHALAIEWQHGDLA 235
Query: 240 ISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 236 LRGWVAEPKGTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQ------ 284
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 285 ------QPAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAAN- 336
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+ + E AE ++ RFQ
Sbjct: 337 --PLSLNEPAE---DAPRFQ 351
>gi|448683833|ref|ZP_21692453.1| DNA mismatch repair protein MutL [Haloarcula japonica DSM 6131]
gi|445783406|gb|EMA34235.1| DNA mismatch repair protein MutL [Haloarcula japonica DSM 6131]
Length = 717
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 161/369 (43%), Gaps = 40/369 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + + +G V+ VV+ELV N++DA A +V V V ++V DD
Sbjct: 1 MTDIQRLDDRTVERIAAGEVVERPASVVKELVENAIDADANRVDVVVEAGGTDGIQVTDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R+ + E+H TSK+ +AD++ G+GT GFRGEAL +I VS L I T+ G
Sbjct: 61 GVGMDREAVETAVEKHTTSKIRDIADLE--GGVGTLGFRGEALHAIGAVSRLTIRTRPRG 118
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G V++G +G + GTT+ DLFYN P RRKY++ + H V
Sbjct: 119 GDVGTELVLEGGDVTSVGPAGCPE--GTTIAVEDLFYNVPARRKYLKQESTEFAH-VNTV 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN----- 234
V AL +P V+ + E T ++S +G E + V A
Sbjct: 176 VASYALANPDVAVSL--THGDRETFSTTGQGDLRETVMSVYGREVAESMISVGAGSEANA 233
Query: 235 ---------DGALE-ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDC 284
DG L+ + G +S P + S + + Y+N RYV G + + +
Sbjct: 234 GGDDAGSFPDGPLDGVHGLVSHPETNRSGREYLSTYVNGRYVRAGTVRDAVVDAYGTQIA 293
Query: 285 SDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIER 344
D + P +L L P D+ P K V F D E V +
Sbjct: 294 PDRY-----------------PFAVLFLDVPAGDVDVNVHPRKMEVRFADDEGVREQVRT 336
Query: 345 AIRSAWMKK 353
A+ A +++
Sbjct: 337 AVEDALLRE 345
>gi|427407123|ref|ZP_18897328.1| DNA mismatch repair protein MutL [Selenomonas sp. F0473]
gi|425707598|gb|EKU70642.1| DNA mismatch repair protein MutL [Selenomonas sp. F0473]
Length = 624
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 171/352 (48%), Gaps = 28/352 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L +A N + +G V+ VV+ELV N++DAGAT V V + G +++V D+
Sbjct: 1 MTRIHVLDDATINKIAAGEVVERPASVVKELVENAIDAGATAVEVEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++R RHATSK+ AD+ +GT GFRGEAL +I+ VS ++T+
Sbjct: 61 GRGMARADAETAILRHATSKIASAADLQT---VGTLGFRGEALPTIASVSRFSLLTRTAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G K I++ D GTTV +LF+N P R+K++++ + +
Sbjct: 118 ADLGTRVDIIGGKPPE--IEEAGCDAGTTVRVEELFFNTPARKKFLKTD-RTEAGKISDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND--GA 237
V+ +AL P ++F+F++ + L T S + S +G + L ++ D G
Sbjct: 175 VIMLALSRPDIAFRFVN--NNRLTLMTAGDDSLRRTIESIYGGDAAGALIPLDFTDEAGD 232
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ I+GYIS P S +A+Q +N R + I K ++++ S GF
Sbjct: 233 IRITGYISKPSMIRSSRAWQTYIVNGRTIQNRAIAKAVDNV------YRSLVPKMGF--- 283
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P +L + P D+ P KT + F+D + + +A+ A
Sbjct: 284 --------PLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKAVLDA 327
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 50/204 (24%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1215
+ QVD +I + L +IDQHAA ERI + L H +LS + +
Sbjct: 438 IGQVDLTYIVAQSAQALYIIDQHAAHERILFDRFSARAEGIPSQQMLVHAILSFDAREAQ 497
Query: 1216 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
Y++ EL +G++L G R + L
Sbjct: 498 YIEENSEL-FSRLGFRL-----------------EPAGDREYR--------------LTE 525
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKACRGAIMFGDSLLPSEC 1333
P + ++ + E L L D ++ P+ LR L + ACR AI G+ L +
Sbjct: 526 APADVPTDEAEHVIREILVSLGDLHAAT---PAELRQAALATMACRAAIKAGEELNFRQM 582
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTV 1357
+++EEL+ T F C HGRPT +
Sbjct: 583 EILLEELRGTPFPFTCPHGRPTIL 606
>gi|85817536|gb|EAQ38710.1| DNA mismatch repair protein MutL [Dokdonia donghaensis MED134]
Length = 626
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 170/346 (49%), Gaps = 29/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGA+ + + V ++++DDG G
Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASSIKLIVKDAGKTLIQIIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ DD + T GFRGEALASI+ V+ + + T+ G
Sbjct: 65 MSDTDARMSFERHATSKI---TTADDLFNLNTKGFRGEALASIAAVAHVALKTRPEGAEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++GSK + + K GT++ ++LF+N P RR +++S+ ++ H + + R
Sbjct: 122 GTHIEIEGSKIITQEVCATPK--GTSLAVKNLFFNIPARRNFLKSNSVELRHVIDEF-QR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP ++F E E L + +++ FG + L V L I+G
Sbjct: 179 VALAHPDIAFAMYHNEGE---LFQLPKGNLKQRIVAIFGGKTNEKLVPVQEETDILTING 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKRSK 301
++ P S + Q+ ++N R++ LNH + A+FD G L +
Sbjct: 236 FVVKPEFSKKTRGEQFFFVNDRFIKSA----YLNHAVTAAFD---------GLLPDR--- 279
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
A +Y L L+ + D+ P KT + F D + A + I+
Sbjct: 280 --ARASYFLYLKVDPATIDINIHPTKTEIKFDDEHALYAMLRSTIK 323
>gi|156932401|ref|YP_001436317.1| DNA mismatch repair protein [Cronobacter sakazakii ATCC BAA-894]
gi|166232088|sp|A7MMA2.1|MUTL_CROS8 RecName: Full=DNA mismatch repair protein MutL
gi|156530655|gb|ABU75481.1| hypothetical protein ESA_00180 [Cronobacter sakazakii ATCC BAA-894]
Length = 635
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 183/380 (48%), Gaps = 37/380 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G+G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGAG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMEVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GALE 239
IAL V+ ++P + S I +FL+ A + G L
Sbjct: 178 IALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEHALAIEWQHGDLA 235
Query: 240 ISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 236 LRGWVAEPKGTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQ------ 284
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 285 ------QPAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAAN- 336
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+ + E AE ++ RFQ
Sbjct: 337 --PLSLNEPAE---DAPRFQ 351
>gi|448680343|ref|ZP_21690660.1| DNA mismatch repair protein MutL [Haloarcula argentinensis DSM
12282]
gi|445768787|gb|EMA19864.1| DNA mismatch repair protein MutL [Haloarcula argentinensis DSM
12282]
Length = 717
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 163/369 (44%), Gaps = 40/369 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + + +G V+ VV+ELV N++DA A +V V V ++V DD
Sbjct: 1 MTDIQRLDDRTVERIAAGEVVERPASVVKELVENAIDADANRVEVVVEAGGTDGIRVTDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R+ + E+H TSK+ +AD++ G+GT GFRGEAL +I VS L I T+ G
Sbjct: 61 GVGMDREAVETAVEKHTTSKIRDIADLEG--GVGTLGFRGEALHAIGAVSRLTIRTRPRG 118
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G V++G +G + GTT+ DLFYN P RRKY++ + H V
Sbjct: 119 GDVGTELVLEGGDVTSVGPAGCPE--GTTIAVEDLFYNVPARRKYLKQESTEFAH-VNTV 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN----- 234
V AL +P V+ + E T ++S +G E + V A
Sbjct: 176 VASYALANPDVAVSL--THGDRETFSTTGQGDLRETVMSVYGREVAESMISVGAGSEGNA 233
Query: 235 ---------DGALE-ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDC 284
DG L+ + G +S P + + + + Y+N RYV G + A D
Sbjct: 234 EGDETDSFPDGPLDGVHGLVSHPETNRAGREYLSTYVNGRYVRAGTVRD------AVIDA 287
Query: 285 SDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIER 344
+ A + + P +L L P D+ P K V F D E V +
Sbjct: 288 YGTQIAPDRY-----------PFAVLFLDVPAGDVDVNVHPRKMEVRFADDEGVREQVRT 336
Query: 345 AIRSAWMKK 353
A+ A +++
Sbjct: 337 AVEDALLRE 345
>gi|421613812|ref|ZP_16054883.1| DNA mismatch repair protein MutL [Rhodopirellula baltica SH28]
gi|408495398|gb|EKJ99985.1| DNA mismatch repair protein MutL [Rhodopirellula baltica SH28]
Length = 705
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 172/350 (49%), Gaps = 28/350 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I +LP + N + + V+ VV+EL+ NS+DAG+T++ + + G +++ DDG G
Sbjct: 15 IRQLPAHLVNQIAASEVIERPASVVKELLENSIDAGSTRIELSLEGGGVELIRISDDGCG 74
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ + L L HATSKL D + +GT GFRGEALASI+ VS + I ++A G+
Sbjct: 75 MTAEQLPLAVTSHATSKL---PDDESLFHVGTLGFRGEALASIASVSQMTIRSRAEGQDG 131
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + ++G G VGT + R+LF+N PVRRK+++ +P+ + + R
Sbjct: 132 GCQIDIRGGVIETPGPCG--CPVGTVIEVRNLFFNTPVRRKFLK-TPQTERGHIVEAFTR 188
Query: 183 IALVHPKVSFKFIDMESED-ELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
+AL +PKV F + + E +LL T + + S FG E L + D ++IS
Sbjct: 189 LALANPKVHFVLRNGDKEMFDLLPTTRWADRIE---SFFGTEISEALIPIENQDETVQIS 245
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
GY P S QY+++N R++ + L H +A G L R
Sbjct: 246 GYACDPSVSRGNNRMQYLFLNGRHIRD----RALQHALG--------EAYRGMLMVGRH- 292
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
P L +R P + D+ P K V F D V + + + +R ++
Sbjct: 293 ----PVCFLRMRMPADMIDVNVHPAKLEVRFTDSGRVYSRLLQTLRQRFL 338
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 19/189 (10%)
Query: 1171 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1230
QV ++++ + VIDQHA ER+ E + KVL + A L+A+Q LV +
Sbjct: 510 QVHQRYLVTQDEKGMVVIDQHALHERVLYERVCQKVLHED----ASLEAQQLLVPEPVSL 565
Query: 1231 QLLQNFAE-QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1289
+ A ++KD + + F L+Q + P + N D+
Sbjct: 566 TPAERAAALEVKDTLSRIGLEIE---DFGGETILIQ---------SYPAML-PNKPPADM 612
Query: 1290 LEFLQQLADTDGSSTTPPSVLR-VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQ 1348
L + + G P +L +L++ AC+ A+ GD L P E ++E+
Sbjct: 613 LRTVLESVMGAGRDPNPKDLLNHLLSTVACKAAVKAGDPLSPEEITSLLEQKDLYQETHH 672
Query: 1349 CAHGRPTTV 1357
C HGRPT +
Sbjct: 673 CPHGRPTAL 681
>gi|386811797|ref|ZP_10099022.1| DNA mismatch repair protein [planctomycete KSU-1]
gi|386404067|dbj|GAB61903.1| DNA mismatch repair protein [planctomycete KSU-1]
Length = 622
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 173/355 (48%), Gaps = 30/355 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I LP +V N + +G V+ VV+EL+ N++DAGA+++ Y+ ++V DD
Sbjct: 1 MSKIKILPSSVINKIAAGEVIDRPASVVKELIENAIDAGASRIDTYLEDGGRKLIRVSDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ + L + + HATSK L DD I + GFRGEAL SI +S II++A G
Sbjct: 61 GVGMDTEDLAIAFQSHATSK---LQSADDLFSIHSLGFRGEALPSIGAISHACIISRAKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER-KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
+G + G LG ER GT V RDLF+N PVR+K+M+++P ++ + + +
Sbjct: 118 TIHGAEIRIDGG---VLGHMKERGAPEGTQVEVRDLFFNTPVRKKFMKTAPTEIAY-ISE 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA 237
+ R +L +PK+ F + + ++ +A I FG E L V +
Sbjct: 174 VLTRFSLSYPKIHFTLM---HNNRMVFNLPPVHDVAERIGMFFGEEMRKHLISVFLREEM 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+SGY+ P+ + + Q++++N RY+ I + ++ +A +G L
Sbjct: 231 CALSGYVVPPFFNKANARMQFIFLNGRYIKDSAIFRAIH------------EAYHGKLMH 278
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
KR P L L+ S D+ P K V F++ + +I A++ K
Sbjct: 279 KR-----YPIVFLFLQVEPSEVDVNVHPTKIEVRFRNTNVMYNYILSALKEGLNK 328
Score = 47.0 bits (110), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 1154 IPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS 1213
IP+ I +S +V Q+ +I L +IDQHA E I L H++ S S
Sbjct: 425 IPEGIMRS----KRVYLQIHNSYIVEETEDGLNIIDQHALHEII----LYHEIESSIRAS 476
Query: 1214 VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITL 1273
++ Q L++PE+ ++F I ++ +I + + F ++ + +
Sbjct: 477 RSF---SQRLLIPELVELNPKDFFSVISLREYLESIGIE-AEEFGQH---------TVVI 523
Query: 1274 LAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSEC 1333
+ P I + + E L +L++ D + ++++ AC+GAI G L P E
Sbjct: 524 RSFPQILKHLNAKAFIEEILAELSEEDFLKGKDKILSKLISVMACKGAIKAGQRLEPQEI 583
Query: 1334 ALIVEELKQT-SLCFQCAHGRPTTVPLVNLEALHKQ 1368
++E+ + + C HGRPT + +L+ L +Q
Sbjct: 584 EELLEKKRSIHAYIHNCPHGRPTALNF-SLDELQRQ 618
>gi|218782320|ref|YP_002433638.1| DNA mismatch repair protein MutL [Desulfatibacillum alkenivorans
AK-01]
gi|218763704|gb|ACL06170.1| DNA mismatch repair protein MutL [Desulfatibacillum alkenivorans
AK-01]
Length = 643
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 164/333 (49%), Gaps = 26/333 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M + LPE + N + +G V+ + V++ELV NS+DA +T++ V V ++V D+
Sbjct: 1 MAPVRILPEILTNKIAAGEVVERPSSVLKELVENSLDAKSTRIVVEVKKGGRSLIQVADN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ +D +L ER+ATSK+ D DD I T GFRGEAL SI VS L +IT+
Sbjct: 61 GDGMDKDDALLCLERYATSKI--YTD-DDLFSISTLGFRGEALPSIGSVSRLTLITRKKD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G + VM+G K + + + GT + DLFYN P RRK++++ ++ H +
Sbjct: 118 NPAGTKVVMQGGKI--VNVSEIGAPPGTMITVADLFYNVPARRKFLKTVATEMGH-IADT 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ +AL P+ +F+ I ++ +L ++ P + G + L + + +
Sbjct: 175 MSAMALGWPETAFELI--HNDRKLFSWPAAQDPQDRIADVLGKDVAPGLIRFSQKEPEVS 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I G ++ P S + K Y+++N R V KL+ H + +K +KGK
Sbjct: 233 IEGCLAMPEFSRTTKRGLYIFVNGRLVT----DKLVTHA-----LMEGYKGR--LMKGK- 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVF 332
P ++ LR P D+ P K V F
Sbjct: 281 -----YPVAVVFLRVPPDQVDVNVHPAKAEVRF 308
Score = 46.6 bits (109), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 17/193 (8%)
Query: 1163 LEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQE 1222
+ D K L Q ++ + L ++DQHAA ERI E+ + + G G + L +
Sbjct: 452 VSDLKALGQFANAYVICRSSKGLLIVDQHAAHERILFEQFKKHMEVG-GIEIQNLLIPET 510
Query: 1223 LVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV 1282
L I ++L+ ++ G ++ R+F + A P +
Sbjct: 511 FELSHIEAEILERILPDLQKTG--IDVDRFSGRTF--------------VVKAAPAMLAN 554
Query: 1283 NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQ 1342
+ + E ++++A+ G++ ++ L AC G++ SL E ++++L+
Sbjct: 555 SDIGKIVKEMVEKVAEAGGNAHFFDALDECLIVMACHGSVRAHQSLSIQEMDALLKQLEA 614
Query: 1343 TSLCFQCAHGRPT 1355
QC HGRPT
Sbjct: 615 CERPSQCPHGRPT 627
>gi|423131920|ref|ZP_17119595.1| DNA mismatch repair protein mutL [Myroides odoratimimus CCUG 12901]
gi|371640921|gb|EHO06515.1| DNA mismatch repair protein mutL [Myroides odoratimimus CCUG 12901]
Length = 761
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ + VV+EL+ NSVDAGAT++ + ++V+D+G G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPSSVVKELIENSVDAGATEIKLILKEAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + +D + T GFRGEALASI+ ++ +E+ T+ H
Sbjct: 65 MSDVDARMSFERHATSKI---SKAEDLFALSTKGFRGEALASIAAIAHVELKTRTHEAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V++G+K + + GT+ ++LF+N P RR +++S + + + + R
Sbjct: 122 GTHIVIEGTKLVSQEV--AVTPAGTSFSVKNLFFNIPARRNFLKSDNVEFRNIIDEFE-R 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I LVH + F I SE + ++ +++ FG L + N +E++G
Sbjct: 179 IVLVHHNIHFSLIHNGSE---VFNLLPTNARQRIVNVFGTRTNEKLVPIKENTEIVEVTG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + + Q+ ++N R+V G +H + A G L K
Sbjct: 236 FVGKPEFAKKSRGEQFFFVNDRFVKSGYLHHAI------------MAAYEGLL-----KE 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P+Y + P D+ P KT V F D + + + + I+
Sbjct: 279 GTHPSYFIYFNVPPDSIDINIHPTKTEVKFDDEQALYSILRSIIK 323
>gi|88704498|ref|ZP_01102212.1| DNA mismatch repair protein mutL [Congregibacter litoralis KT71]
gi|88701549|gb|EAQ98654.1| DNA mismatch repair protein mutL [Congregibacter litoralis KT71]
Length = 629
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 170/348 (48%), Gaps = 31/348 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RLP + N + +G V+ VV+EL+ NS+DAGA +V + + +++ DD
Sbjct: 1 MPLIKRLPPRLANQIAAGEVVERPASVVKELLENSLDAGARRVDLDIEAAGTKLIRIRDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK-AH 118
GSGI+ D L L +RHATSK+ L DD +G+FGFRGEALASI VS L + + A
Sbjct: 61 GSGIASDDLPLALDRHATSKIESL---DDLEQVGSFGFRGEALASIGSVSHLVVTSNTAE 117
Query: 119 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
+G G + + + + GTTV RDLF+N P RRK++++ + H +
Sbjct: 118 AGSDGQAASCSG-RDMEVTLKPAAHPRGTTVEVRDLFFNTPARRKFLRTERTEFNH-LDD 175
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSP----LALLISSFGIEDFSFLDEVNAN 234
V RIAL VSF + L C + + +A L +E+ +D N
Sbjct: 176 VVKRIALSRFDVSFALRHNGRQLRDLRRCDNEADQLRRVASLCGPAFVENAVAIDR---N 232
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
G L + G+++ P S S Q+ Y+N RY+ KL+ H A SD
Sbjct: 233 AGDLRLHGWVAQPSFSRSQADLQHFYVNGRYIRD----KLVVH-AVRQAFSDV------L 281
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 342
+G+ PA++L L + D+ P K V F+D V +FI
Sbjct: 282 YQGRH------PAFVLYLELDPAEVDVNVHPTKHEVRFRDGRSVHSFI 323
>gi|421858020|ref|ZP_16290309.1| DNA mismatch repair enzyme [Paenibacillus popilliae ATCC 14706]
gi|410832470|dbj|GAC40746.1| DNA mismatch repair enzyme [Paenibacillus popilliae ATCC 14706]
Length = 710
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 174/355 (49%), Gaps = 28/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ L + + N + +G V+ + VV+ELV NS+DAG+T++ V V ++V D+
Sbjct: 1 MAVIHILDDHIANQIAAGEVVERPSSVVKELVENSIDAGSTRIDVTVEEGGLQLIRVKDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI+ D + +RHATSK +A D I + GFRGEAL SI+ V+ +E+ + A
Sbjct: 61 GSGIAEDDVETAFQRHATSK---IASGKDLFAIRSLGFRGEALPSIAAVARVELTSSADD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + M+G G + + GT + RDLFYN P R KYM++ ++ H +
Sbjct: 118 NGLGRKLTMEGGTVKAFGPEQSMR--GTDIAIRDLFYNTPARLKYMKTVQTELGH-ISDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGAL 238
+ R+AL +P+++F + D LL + L +I++ +G++ + V A
Sbjct: 175 IYRLALAYPQIAFT---LRHNDNLLLQTIGNGDLQQVIAAVYGVQTAKSMVPVEAEQLDY 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++ GYI P + S + ++N RYV +++ + KA + L
Sbjct: 232 KLKGYIGKPELTRSNRNAMSWFVNGRYVRSFALNQAV------------LKAYHTLLPIN 279
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
R P +L+++ +L D+ P K V F + FI +R +++
Sbjct: 280 R-----FPMIVLHVQMHPTLVDVNVHPAKLEVRFSKEPDLCEFISSTLRDILLEQ 329
>gi|363580107|ref|ZP_09312917.1| DNA mismatch repair protein MutL [Flavobacteriaceae bacterium HQM9]
Length = 634
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 179/373 (47%), Gaps = 27/373 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ NS+DAGAT V + + ++VVD+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENSIDAGATHVSLIIKEAGKTLIQVVDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK + DD + T GFRGEALASI+ ++ +E TK +
Sbjct: 65 MSVTDARLSFERHATSK---IKTADDLFALATKGFRGEALASIAAIAHVEQKTKQENQDL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++GS+ ++ K GT + ++LFYN P RR +++S+ ++ H + + R
Sbjct: 122 GTHIKIEGSEVIFQEPCATPK--GTAIWVKNLFYNVPARRNFLKSNGVELRHIIDEF-HR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+A+VH V F+F SE + S+ L+ FG + L V + ++G
Sbjct: 179 VAMVHCNVHFEFYSNGSE---VLNLPVSNKRQRLVHIFGGKTNEKLVPVTEETELVNVTG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + + Q+ ++N R+V K P L+H S A G LK K
Sbjct: 236 FVGKPGHAKKTRGEQFFFVNDRFV-KSP---YLHHAVTS--------AFEGLLKDK---- 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
+ P+Y L L D+ P KT V F + + + A I ++ + + D
Sbjct: 280 -SYPSYYLYLAVDPKSIDINIHPTKTEVKFDNEQALYAIIRATVKHSLGQFNIAPVLDFQ 338
Query: 363 MLEDAELPLESSR 375
+LP E ++
Sbjct: 339 RDASMDLPYEQAK 351
>gi|238764690|ref|ZP_04625634.1| DNA mismatch repair protein mutL [Yersinia kristensenii ATCC 33638]
gi|238697086|gb|EEP89859.1| DNA mismatch repair protein mutL [Yersinia kristensenii ATCC 33638]
Length = 631
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 187/380 (49%), Gaps = 36/380 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARHATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQNE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
IAL V+ I++ +L+ S L S G ++ G L
Sbjct: 178 IALARFDVA---INLSHNGKLMRQYRAATDPSQHERRLASICGPAFLQHALAISWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S ++ QY Y+N+R + +L+NH +A LK
Sbjct: 235 TIRGWVADPAASRTLSEMQYCYVNNRMMRD----RLINHAIR--------QAYQDLLKDD 282
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 283 QQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQAATP 335
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+++ ED E +E+ R+Q
Sbjct: 336 RLNIN--EDGE-EIEAPRWQ 352
>gi|154497032|ref|ZP_02035728.1| hypothetical protein BACCAP_01325 [Bacteroides capillosus ATCC
29799]
gi|150273431|gb|EDN00559.1| putative DNA mismatch repair protein [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 684
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 173/351 (49%), Gaps = 26/351 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I +L V + + +G V+ VV+ELV N++DAGA V V + ++V D+
Sbjct: 7 MPHIQQLDPHVADLIAAGEVVERPASVVKELVENAIDAGAETVTVEIQRGGMSLIRVTDN 66
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D RHATSK+ D++ IGT GFRGEALA+I+ VS ++++T+
Sbjct: 67 GCGIAADEAETAFLRHATSKIRTEHDLE---AIGTLGFRGEALAAIAAVSRVDLLTRTAE 123
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G ++G + + ++ VGTT+V RDLF+N P R K+M+ + +V
Sbjct: 124 EDLGAALSLEGGEVVSR--EEAGCPVGTTMVVRDLFFNTPARLKFMKKDAAEG-AAVFAM 180
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP+VS KF+ + + ELL T + + S G + L EV + +
Sbjct: 181 VQRLALAHPEVSMKFLR-DGKQELL-TPGDGQMKSAVYSVLGRDLALGLIEVKGSGEDMT 238
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G+ S P + +Q+ ++N RYV K +AA + + K F
Sbjct: 239 VTGFTSLPACCRPTRGYQHFFVNGRYV------KSRTMMAALEEAYQNQKMVGKF----- 287
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
PA +L+L C S D+ P K V F + V + + A+ SA
Sbjct: 288 ------PACVLHLTCRLSGVDVNVHPTKQEVKFGNERQVFSAVYYAVLSAL 332
>gi|117919048|ref|YP_868240.1| DNA mismatch repair protein [Shewanella sp. ANA-3]
gi|189030415|sp|A0KSR5.1|MUTL_SHESA RecName: Full=DNA mismatch repair protein MutL
gi|117611380|gb|ABK46834.1| DNA mismatch repair protein MutL [Shewanella sp. ANA-3]
Length = 648
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 173/355 (48%), Gaps = 35/355 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +K+ D+
Sbjct: 1 MG-IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDN 59
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI +D L L RHATSKL L DD I +FGFRGEALASIS VS L + ++
Sbjct: 60 GSGIPKDELALALSRHATSKLHSL---DDLEAILSFGFRGEALASISSVSRLTLTSRTAE 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ ++ +G+ + + + VG+T+ DLF+N P RR++++S + H + +
Sbjct: 117 QTEAWQAYAEGAD-MAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTH-IDEW 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNAND 235
+ RIALV + F + +++ C + + + F DE V
Sbjct: 175 LKRIALVRGDIHFT---LTHNGKIVRNCRPAMNEPQYLQRLTQVAGRQFADEALRVECQH 231
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
L +SGY+ SP+ ++ + Y Y+N R V +L+NH F
Sbjct: 232 DDLRLSGYLQSPWSTV-LTDTHYFYVNGRLVRD----RLVNH-----------AVRQAFA 275
Query: 296 KGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
+ + P Y+L L PH + D+ P K V F V +I +A++SA
Sbjct: 276 QKAEVEQ---PGYVLMLDIDPHQV-DVNVHPAKHEVRFHQSRYVHDYILQALQSA 326
>gi|429106267|ref|ZP_19168136.1| DNA mismatch repair protein MutL [Cronobacter malonaticus 681]
gi|426292990|emb|CCJ94249.1| DNA mismatch repair protein MutL [Cronobacter malonaticus 681]
Length = 635
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 184/380 (48%), Gaps = 37/380 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G+G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGAG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMEVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GALE 239
IAL V+ ++P + S I +FL++ A + G L
Sbjct: 178 IALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEQALAIEWQHGDLA 235
Query: 240 ISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 236 LRGWVAEPKGTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQQ----- 285
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
PAY+L L PH + D+ P K V F V FI + + S + + A +
Sbjct: 286 -------PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSV-LNQQAAN 336
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+D E AE ++ RFQ
Sbjct: 337 PLSLD--EPAE---DAPRFQ 351
>gi|378822174|ref|ZP_09844993.1| DNA mismatch repair protein [Sutterella parvirubra YIT 11816]
gi|378599007|gb|EHY32076.1| DNA mismatch repair protein [Sutterella parvirubra YIT 11816]
Length = 779
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 170/347 (48%), Gaps = 30/347 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP + + + +G V+ VV+ELV N+VDAGAT + + + G + V DDG G
Sbjct: 56 IQELPSELISQIAAGEVIERPASVVKELVENAVDAGATSIEIRIEGGGLKRILVTDDGCG 115
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I ++ L L +RHATSK+ +L ++++ T + GFRGEALASI V+ + + + A G
Sbjct: 116 IPKEELGLALKRHATSKIRNLFELENVT---SLGFRGEALASIDAVAAVSVQSLAEGATR 172
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
+ K+ G G GT + RDLFY P RRK+M+S + H + V R
Sbjct: 173 TW-KIEGGEVTPAAGTTR-----GTRIEVRDLFYKTPARRKFMKSETTEAAH-IADQVSR 225
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IAL +P+VSF+ + E L AL I +E + V+ G++ + G
Sbjct: 226 IALANPQVSFRLWNNGREMLNLPASPDLEGRALKILPSRLEVNHRV--VDMEAGSMSLVG 283
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+ P + + QY+++N R+V ++ H + A L G
Sbjct: 284 IVGLPAAAKAKADAQYLFVNGRFVRD----RVFAHAVRA--------AYQDVLHG----- 326
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
Q P+Y L L + D+ P KT V F+D + AF+++A+ +A
Sbjct: 327 QLQPSYCLFLTIAPTEVDVNVHPTKTEVRFRDSGRIHAFVQKAVETA 373
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 28/178 (15%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L ++D HAA ERI E+L+ + EG+ Q L++P Q++Q ++ +
Sbjct: 606 LVIVDMHAAAERITYEKLKKD--ADEGRLPV-----QPLLIP----QVMQATVTEVAN-- 652
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVD-------LLEFLQQLA 1297
H R+ +L+ + VI +VP + +SDV + E L LA
Sbjct: 653 --AQAHADELRAMGLDLSPAGERSLVIR--SVPSV----ISDVAGEELETMVREVLADLA 704
Query: 1298 DTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1355
+ S +L + AC G++ L E ++ +++T QC HGRPT
Sbjct: 705 EFGESRVVLEKRNHILATMACHGSVRANRRLTMEEMNALLRSMERTERSDQCNHGRPT 762
>gi|399026999|ref|ZP_10728637.1| DNA mismatch repair protein MutL [Flavobacterium sp. CF136]
gi|398075763|gb|EJL66869.1| DNA mismatch repair protein MutL [Flavobacterium sp. CF136]
Length = 628
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 169/346 (48%), Gaps = 29/346 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDA AT + + V+V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAVDAKATDIKLIIKDAGKSLVQVIDNGLG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ D+ + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSVTDARMCFERHATSKIRQAEDL---FSLHTKGFRGEALASIAAIAHMEMKTKQDQEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V++GSK + + K GT+ ++LF+N P RR +++S + H V R
Sbjct: 122 GTHIVIEGSKFISQEVAVLPK--GTSFAVKNLFFNIPARRNFLKSDTVEFRH-VMDEFQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP + F F SE + S+ ++ F + L VN + I G
Sbjct: 179 VALAHPNIHFTFYHNGSE---MYNLPISNFRQRIVGIFSGKTNEKLVPVNEETEIISIQG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P S + Q+ ++N R++ G +H + + A++D G LK
Sbjct: 236 FVCKPEFSKKNRGEQFFFVNDRFIKSGYLH---HAVMAAYD---------GLLK------ 277
Query: 303 QAC-PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
C P+Y L L+ P + D+ P KT + F D + + A + +I+
Sbjct: 278 DGCQPSYFLYLQVPPNTIDINIHPTKTEIKFDDEQALYAILRASIK 323
>gi|331084835|ref|ZP_08333923.1| hypothetical protein HMPREF0987_00226 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410929|gb|EGG90351.1| hypothetical protein HMPREF0987_00226 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 691
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 176/359 (49%), Gaps = 36/359 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ +V+ELV N++DA AT + V + G+ +++
Sbjct: 1 MPNIQVLDQVTIDKIAAGEVIERPASIVKELVENAIDAKATAITVEIKDGGIS--LIRIA 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI ++ + L RH+TSK+ + D+ TGI + GFRGEAL+SI+ ++ +E+ TK
Sbjct: 59 DNGCGIPKEEVPLAFLRHSTSKIRSVEDL---TGIASLGFRGEALSSIAAIAQVELRTKV 115
Query: 118 HGRPNGYRKVMKGS--KCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + ++G K L +G+ D GT R +F+N P RRK++++ + H
Sbjct: 116 KEADAGIQYRIEGGSEKSLEEIGMPD-----GTAFFVRQIFFNTPARRKFLKTPMTEASH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
V + + R+AL HP++SF+F + + L T + ++ +G + L E+NA
Sbjct: 171 -VSELITRLALSHPEISFQF--LTNGQPKLHTSGNGRLKDVIYHIYGRDITGNLLEINAK 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
+ I GYI P S + ++ YIN RYV I K + D++K GF
Sbjct: 228 ANGVAIRGYIGKPLISRGNRNYENYYINGRYVKSSIIAKAI---------EDAYK---GF 275
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ P +L+ + D+ P K V F + V FI ++ A +K
Sbjct: 276 -----TMQHKYPFTVLHFTIDGTDLDVNVHPTKMEVRFSKQQEVYNFIYNTLKDALSEK 329
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 33/220 (15%)
Query: 1152 FFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERI----RLEELRHKVL 1207
FF ++K ++ ++ QV + + V + +IDQHAA ER+ L+ ++ K
Sbjct: 488 FFDQKLLSKEAKQEYTLVGQVFETYWIVEYRDQMYIIDQHAAHERVLYERTLKRMKEKQF 547
Query: 1208 SGEGKS---VAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLL 1264
+ + S V L ++E QLL E G+ I G S+
Sbjct: 548 TSQRISPPIVLNLSMQEE--------QLLSEHMENFTKIGF--EIEPFGGDSY------- 590
Query: 1265 QRQITVITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIM 1323
+ AVP +F + D+ L+E L L+D+ ++ P VL + S +C+ A+
Sbjct: 591 -------AVRAVPDNLFSIAKKDL-LIEMLDSLSDSISTNLAPDIVLEKIASMSCKAAVK 642
Query: 1324 FGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
L E ++ EL + + C HGRPT + + E
Sbjct: 643 GNSRLSGREVDALIGELLELDNPYHCPHGRPTIIAMTKRE 682
>gi|303228550|ref|ZP_07315378.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-134-V-Col7a]
gi|302516797|gb|EFL58711.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-134-V-Col7a]
Length = 652
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 180/355 (50%), Gaps = 34/355 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGV-CNCYVKVVDD 59
M TI+ L E N + +G V+ VV+EL+ NS+DAGAT + V +G + Y+++ D+
Sbjct: 1 MATIHVLDETTINKIAAGEVVERPASVVKELIENSIDAGATSIEVEIGEGGSAYMRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + L RHATSK+ ++ D+ D I + GFRGEALASI+ VS + T+
Sbjct: 61 GEGMTEEDARLAVLRHATSKIQNVEDLFD---IASLGFRGEALASIASVSHFVLTTRTVD 117
Query: 120 RPNGYRKVMKG---SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+ G R ++ G + C+ G GTT+ ++LF+N P RRK++++ + +
Sbjct: 118 QELGTRILIDGGTFTDCIPYGAAP-----GTTIEVKELFFNTPARRKFLKTE-RTESSKI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAND 235
+ V ++AL +P ++FK + +D + + P+ +++ +G + + + +
Sbjct: 172 QDIVGKLALSNPHIAFK---LTIDDRVAIITPGTGPIQDTVAALYGYKTKNDIFPIAYES 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
+ I G +S P S + +Q + +N+R + I K ++ + + +G+
Sbjct: 229 EHIYIEGVVSKPTLLKSTRIWQTIIVNNRVISDKTILKAID------NAYHALLPKSGY- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
P LL++ P S+ D+ P K+ V F+D + + + AI +A
Sbjct: 282 ----------PLVLLHITVPASMVDINVHPRKSEVKFEDDKIIFKAVYHAILNAL 326
>gi|237809130|ref|YP_002893570.1| DNA mismatch repair protein MutL [Tolumonas auensis DSM 9187]
gi|259511152|sp|C4L9N1.1|MUTL_TOLAT RecName: Full=DNA mismatch repair protein MutL
gi|237501391|gb|ACQ93984.1| DNA mismatch repair protein MutL [Tolumonas auensis DSM 9187]
Length = 594
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 190/396 (47%), Gaps = 39/396 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ V++ELV NS+DAGA ++ V + C ++V D+G G
Sbjct: 3 IQILPPILANQIAAGEVVERPASVIKELVENSLDAGANRIDVELEKGGCQLIRVRDNGGG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I L L RHATSK+ A +DD I + GFRGEALASIS VS L + ++ G+
Sbjct: 63 ICGTELALALARHATSKV---ATLDDLEHIASLGFRGEALASISSVSRLTLTSRTAGQHE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTTV DLF+N P RR++++S + H + + + R
Sbjct: 120 AWQAYAEGRE-MAVTVKPAAHPVGTTVEVLDLFFNTPARRRFLRSEKTEFAH-IDELLRR 177
Query: 183 IALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
+AL V+ I+++ +LL + S ++ + G E +++ L
Sbjct: 178 LALSRFDVA---INLKHNGKLLRQYRPAQTESQQEQRVVQACGAEFMQAALRIDSEHLGL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLA--ASFDCSDSWKANNGFLK 296
+ G++ +P ++ QY Y+N R + KLLNH A +C+
Sbjct: 235 HLYGWL-APQPLTAINEVQYCYVNGRMIRD----KLLNHAIRQAYSECTG---------- 279
Query: 297 GKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
+ PAY+L L PH + D+ P K V F + V FI + IR A +
Sbjct: 280 -----TSFQPAYILYLELDPHQV-DVNVHPSKHEVRFHESRQVHDFIVQVIRQALQTAYS 333
Query: 356 HDSFDVDM--LEDAELPLESSRFQSHQSSTHLHSSP 389
++ D +EDA S ++ + H +S+P
Sbjct: 334 ENAPDAVFSGIEDAAPDYPVSPLKNRATGQHQYSAP 369
>gi|423346942|ref|ZP_17324629.1| DNA mismatch repair protein mutL [Parabacteroides merdae
CL03T12C32]
gi|409218603|gb|EKN11571.1| DNA mismatch repair protein mutL [Parabacteroides merdae
CL03T12C32]
Length = 621
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 177/369 (47%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ LP+++ N + +G V+ VV+ELV N+VDAGA + V + V+V+DDG G
Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASVVKELVENAVDAGAGHIQVNIKDAGRTLVQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ + DD + T GFRGEALASI VS +E+ T+ G
Sbjct: 65 MSETDARMAFERHATSKI---STADDLFSLHTMGFRGEALASIVAVSQVELRTRLKGAEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V GS+ ++ + G+ ++LF+N P RRK+++S+ + + + + R
Sbjct: 122 GTHLVFSGSEL--ESVEPDACTEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFE-R 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+ +V+ ++E + S +++ +G L V+A + ISG
Sbjct: 179 IALVNSQVALSLYHNDTE---IFNLPESGLRQRIVNVYGKTLNQKLLSVDAQSSLVTISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A QY ++N R++ HK + +A +
Sbjct: 236 FVGRPDSAKKRGALQYFFVNGRFMKHPYFHKAV------------MQAYEQLIPVGEQ-- 281
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y + + D+ P KT + F++ +P+ + A R A K A + D D
Sbjct: 282 ---PNYFIYFTLDPATIDVNIHPTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFD 338
Query: 363 MLEDAELPL 371
+ + ++P+
Sbjct: 339 VEDAIDIPV 347
>gi|354596041|ref|ZP_09014058.1| DNA mismatch repair protein mutL [Brenneria sp. EniD312]
gi|353673976|gb|EHD20009.1| DNA mismatch repair protein mutL [Brenneria sp. EniD312]
Length = 643
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 171/349 (48%), Gaps = 32/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G+G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNGAG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHATSK---IATLDDLEAIVSLGFRGEALASISSVSRLTLTSRTAQQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMSVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFAH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGAL 238
IAL V+ I + +L+ + A G I +FL V+ L
Sbjct: 178 IALARFDVA---ITLRHNGKLIRQYRPAPEPAQHERRLGSICGSAFLQHALTVSWRHDDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P + + QY Y+N R + +L+NH +++
Sbjct: 235 TIHGWVADPSGAKQLPEMQYCYVNQRMMRD----RLINH-----AIRQAYQ--------D 277
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
R K + PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 278 RLKDEQQPAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|344201595|ref|YP_004786738.1| DNA mismatch repair protein mutL [Muricauda ruestringensis DSM
13258]
gi|343953517|gb|AEM69316.1| DNA mismatch repair protein mutL [Muricauda ruestringensis DSM
13258]
Length = 615
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 172/345 (49%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAG+T + + ++VVDDG G
Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELMENAIDAGSTSIKLIIKDGGKALIQVVDDGVG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ D+ + + T GFRGEALASI+ ++ +++ T+
Sbjct: 65 MSETDARLSFERHATSKISSAQDLFN---LETKGFRGEALASIAAIAHVDMQTRTSSNEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++GSK + + K GT++ ++LF+N P RR +++S+ ++ H + R
Sbjct: 122 GTHLKIEGSKIVSQDVVATPK--GTSISVKNLFFNIPARRNFLKSNQVELRH-ITDEFHR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+ALVHP + F F + SE + + ++ FG + S L VN +++SG
Sbjct: 179 VALVHPNIEFHFYNNGSE---IFNLPIAKHRQRIVHIFGSKMESRLVPVNEETEVVKVSG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+I P + + Q+ + N+R++ +H + + A+F+ G + KS
Sbjct: 236 FICKPEFAKKSRGEQFFFANNRFIKSPYLH---HAVVAAFE---------GLI-----KS 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P Y L L S D+ P KT V F D + A + I+
Sbjct: 279 DTYPGYFLFLDVDPSSIDINIHPTKTEVKFDDENTLYAILRSTIK 323
>gi|261823153|ref|YP_003261259.1| DNA mismatch repair protein [Pectobacterium wasabiae WPP163]
gi|261607166|gb|ACX89652.1| DNA mismatch repair protein MutL [Pectobacterium wasabiae WPP163]
Length = 661
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 171/358 (47%), Gaps = 32/358 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHATSKITTL---DDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGAL 238
IAL V+ I + +L+ ++ + G I +FL V+ L
Sbjct: 178 IALARFDVA---ITLHHNGKLMRQYRAAPDKSQYERRLGTICGATFLQHALAVSWQHDDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P + + QY Y+N R + +L+NH +
Sbjct: 235 TIHGWVADPVGAKQLPDMQYCYVNQRMMRD----RLINH-----------AIRQAYQDQL 279
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
R Q PAY+L L PH + D+ P K V F V FI +A+ S + A
Sbjct: 280 RDDQQ--PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMSVLQQASA 334
>gi|189030396|sp|A9KE32.1|MUTL_COXBN RecName: Full=DNA mismatch repair protein MutL
Length = 574
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 174/366 (47%), Gaps = 44/366 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I RL + N + +G V+ VV+EL+ NS+DA A+ + V + +++ DDG G
Sbjct: 3 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + LVL ERHATSK +A +DD I T GFRGEALASIS VS L + ++
Sbjct: 63 IHPEDLVLALERHATSK---IAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEM 119
Query: 123 GYR------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
GYR K+M + GTT+ +DLFYN P RRK+++ SP +
Sbjct: 120 GYRISNISHKIMTPVPAAH--------PQGTTIDVQDLFYNTPARRKFLR-SPATEFQHI 170
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA--- 233
++ + R+AL H + +F+ +E E++ S+++ I F+ A
Sbjct: 171 RRIIERLALSH--FTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIEF 228
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+ L + GYI+ + S QY+Y+N R+V I + L A D
Sbjct: 229 SQSGLTLKGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQ--AYHDV--------- 277
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
G+ PAY+L L + D+ P K V F+D + V F+ A+++A +
Sbjct: 278 LFHGRH------PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTALAQA 331
Query: 354 ---IAH 356
IAH
Sbjct: 332 KPGIAH 337
>gi|415886658|ref|ZP_11548438.1| DNA mismatch repair protein [Bacillus methanolicus MGA3]
gi|387587345|gb|EIJ79668.1| DNA mismatch repair protein [Bacillus methanolicus MGA3]
Length = 637
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 199/419 (47%), Gaps = 39/419 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I +L + + N + +G V+ VV+ELV N++DAG+T + V + ++V+D+
Sbjct: 1 MGKIIQLDDLLSNKIAAGEVVERPASVVKELVENAIDAGSTIIEVEIEEAGMAKIRVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L +RHATSK + D +D I T GFRGEAL SI+ VS LE+ T + G
Sbjct: 61 GDGIEEEDVPLAFQRHATSK---IKDENDLFRIRTLGFRGEALPSIAAVSRLELKT-STG 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + V+KG K + RK GT + DLF+N P R KY+++ + L ++
Sbjct: 117 NDAGTKIVLKGGKVEKIEKSPSRK--GTDITVTDLFFNTPARLKYLKTIHTE-LGNITDV 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL +P +SF+ + + +LL T + +L + +GI + ++ +
Sbjct: 174 MNRLALGNPNISFRLV--HNGRKLLHTVGNGDVRQVLAAIYGINIVKKMIPISFESLDFQ 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++GYIS P + + + + IN R++ P+ K + + + L R
Sbjct: 232 VTGYISLPEVTRASRNYITTMINGRFIKNYPLVKAIQ------------EGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P LLN++ L D+ P K V + + I+ A +
Sbjct: 280 -----YPIVLLNIQMDPLLVDVNVHPAKMEVRLSKEHELNELVTTGIKQALKTQ------ 328
Query: 360 DVDMLEDAELPLESSRFQSHQSSTHL-HSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+++ ++ R ++ Q+ L H KN ++D H++ E ITF K+P
Sbjct: 329 --ELIPSGIQQVKKERPKTEQTYMDLDHLPEWKNDLVEKD---HEKQEPITFTPAVKEP 382
>gi|34496797|ref|NP_901012.1| DNA mismatch repair protein [Chromobacterium violaceum ATCC 12472]
gi|34102652|gb|AAQ59017.1| DNA mismatch repair protein [Chromobacterium violaceum ATCC 12472]
Length = 631
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 171/350 (48%), Gaps = 27/350 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RLP+ + N + +G V+ ++E++ NS+DAGAT++ V + ++V D+
Sbjct: 1 MTRIQRLPDHLVNQIAAGEVVERPASALKEMLENSLDAGATRISVDLAQGGIKLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G+GI+ D L L +RHATSK +A +DD + T GFRGE LAS++ VS L + ++ H
Sbjct: 61 GAGIAADDLPLALDRHATSK---IASLDDLESVSTLGFRGEGLASVASVSRLTLTSRPHD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ + +++ L+ ++ GT+V DL++N P RRK+++S + H
Sbjct: 118 ADHAH-QIIAIDGTLH-PVEPAAHPHGTSVEVVDLYFNTPARRKFLKSENTEYAHCA-AT 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
RIAL HP+V F L + S+ +A L+ G + + +++ G L
Sbjct: 175 FERIALAHPEVEFLLRHNGKVAWRLPSQSAEDRVAALL---GKDFVAAAIPLDSQAGPLA 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SG+++SP S + + QY Y+N R+V L +A L R
Sbjct: 232 LSGFVASPTYSKASRDAQYFYVNGRFVRDKTAQHALR------------QAYRDVLHHDR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
PAY L S D+ P K V F++ + V F+ ++ A
Sbjct: 280 H-----PAYALFFTLEPSGVDVNVHPTKIEVRFRESQAVHQFLFHSVHKA 324
Score = 40.8 bits (94), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 70/175 (40%), Gaps = 25/175 (14%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L ++D HAA ERI E L+ + E ++ Q L+LP +FA D
Sbjct: 461 LILVDMHAAHERIVYERLKAAL---ESDAIPL----QPLLLP-------VSFA---ADRM 503
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQ-LADTDGSS 1303
+ H G + L T I + VP V L D D +E + L D
Sbjct: 504 EVATAHEHGEEMKRLGVELAPLSPTQIAVRGVP----VWLKDGDPVELARAVLKDVREFG 559
Query: 1304 TTPPSVLR---VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1355
T R +L + AC GA+ L E ++ +++ T QC HGRPT
Sbjct: 560 LTQVLTERRNELLATMACHGAVRANRQLTLPEMNALLRDMEATERSGQCNHGRPT 614
>gi|422015307|ref|ZP_16361906.1| methyl-directed mismatch repair protein [Providencia
burhodogranariea DSM 19968]
gi|414099472|gb|EKT61113.1| methyl-directed mismatch repair protein [Providencia
burhodogranariea DSM 19968]
Length = 652
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 171/374 (45%), Gaps = 52/374 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I L + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+
Sbjct: 1 MG-IQILSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGEKLIRIRDN 59
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI +D L+L RHATSK +A +DD I + GFRGEALASIS VS L + +K
Sbjct: 60 GSGIGKDELILALARHATSK---IATLDDLEAIMSMGFRGEALASISSVSRLTLTSKPAE 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ ++ +G + + + + GTTV DLFYN P RRK+M++ + H + +
Sbjct: 117 QSEAWQSYAEG-RDMAVTVKPAAHPNGTTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEI 174
Query: 180 VLRIALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDF 225
V RIAL P V+ K + + + E L C + L S+
Sbjct: 175 VRRIALSRPDVAINLNHNGKLVKQYRAAHDEAQQERRLATICGTGFMQGALAISW----- 229
Query: 226 SFLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCS 285
G L I G++ SP + V QY Y+N R + +L+NH
Sbjct: 230 --------QHGDLGIKGWVVSPSNG-PVSDIQYCYVNGRMMRD----RLINHAIR----- 271
Query: 286 DSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 345
+A G L + PAY+L L D+ P K V F V FI +
Sbjct: 272 ---QAYEGHLDDNQQ-----PAYVLYLTIDPQQVDVNVHPAKHEVRFHQARLVHDFIYQG 323
Query: 346 IRSAWMKKIAHDSF 359
+R+A + D
Sbjct: 324 VRTALLNAYESDEL 337
>gi|225378111|ref|ZP_03755332.1| hypothetical protein ROSEINA2194_03771 [Roseburia inulinivorans DSM
16841]
gi|225210112|gb|EEG92466.1| hypothetical protein ROSEINA2194_03771 [Roseburia inulinivorans DSM
16841]
Length = 647
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 211/460 (45%), Gaps = 51/460 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ + VV+ELV N++DA AT V V + G+ ++++
Sbjct: 1 MPEIMLLNQETIDKIAAGEVVERPSSVVKELVENAIDAKATAVTVEIKEGGIS--FIRIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI + + + RH+TSK+ ++D I + GFRGEAL+SI+ V+ +E+ITK
Sbjct: 59 DNGCGIEKKQVPIAFLRHSTSKI---RSVEDLLSIHSLGFRGEALSSIAAVAQVELITKT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDV--GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
+ G R V++GSK I++E GTT + R+LFYN P RRK+++++ + +
Sbjct: 116 YEELTGTRYVIEGSK----EIENEEIGAPEGTTFIVRNLFYNVPARRKFLKTAQTEAGY- 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
+ + R+AL HP VSFKFI+ + L T + + L+ +G + S + +V
Sbjct: 171 ISDLMERMALSHPDVSFKFIN--NGQTKLHTSGNGNEKDLIYHIYGRDITSAVLKVEHET 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
++ G+I P S + ++ +IN RY+ I K + +A GF+
Sbjct: 229 ELFKLRGFIGKPMISRGNRNYENYFINGRYIKSALIAKSIE------------EAYKGFM 276
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
P +L L D+ P K + F E + + IR I+
Sbjct: 277 -----MQHQYPFCVLYFEMDSELLDVNVHPTKMELRFSQNEEIYHSLFEIIRDT----IS 327
Query: 356 HDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHK----ECERITFQ 411
H F E+P+ + ++ P + + +D F K +T Q
Sbjct: 328 HRDF------IPEVPVTEEKKETIPPVPKHTPEPFEIRRRGQDAFFEKMKQTSASPLTVQ 381
Query: 412 E---FQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECL 448
E F K AE NT E ++ L+ +F E +
Sbjct: 382 EENLFAKPLAAEAETNTSKEPIAEIHSEQPTLENNFKEIV 421
Score = 53.5 bits (127), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 26/210 (12%)
Query: 1158 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 1217
+ K + K++ Q+ + + L +IDQHAA E++ L E K +S + + +
Sbjct: 451 LTKDARKKHKIIGQLFDTYWLIEYEDKLFIIDQHAAHEKV-LYERTMKKISEKTFTSQTI 509
Query: 1218 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1277
L L + Q L+ + Q+ +G+ I G + + + A+P
Sbjct: 510 SPPIILTLNQDEVQALETYEAQLSMFGY--EIEPFGGKEY--------------AITAIP 553
Query: 1278 CIFGVNLSDVDL----LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSEC 1333
F +D+D+ +E L A+ G P ++ + S +C+ A+ + L E
Sbjct: 554 ADF----TDIDMKTMFIEMLDDFANISGKDA-PNLIMEKVASMSCKAAVKGNNHLSRPEI 608
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
+++EL + + C HGRPT + + E
Sbjct: 609 EALIDELLELDNPYNCPHGRPTIISMTKYE 638
>gi|346306309|ref|ZP_08848467.1| hypothetical protein HMPREF9457_00176 [Dorea formicigenerans
4_6_53AFAA]
gi|345900114|gb|EGX69942.1| hypothetical protein HMPREF9457_00176 [Dorea formicigenerans
4_6_53AFAA]
Length = 687
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 178/378 (47%), Gaps = 30/378 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ VV+EL N++DAGAT V V + G+ ++++
Sbjct: 1 MSKIQVLDQITIDKIAAGEVIERPASVVKELAENAIDAGATAVTVEIKEGGIT--FMRIA 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI ++ + RH+TSK+ +D I + GFRGEAL+SI+ VS +E++TK
Sbjct: 59 DNGIGIDKEDVRAAFLRHSTSKI---RSAEDLAHISSLGFRGEALSSIAAVSQVELLTKT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G R + G K L +D GTT + R LFYN P RRK+++++ + H V
Sbjct: 116 KEAEFGVRYKIAGGKEESL--EDAGAPDGTTFLIRQLFYNTPARRKFLKTAMTEASH-VG 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
V R+AL HP+VSF+FI+ + L T + + ++ +G E S L EV+
Sbjct: 173 DLVTRLALSHPEVSFRFIN--NGQVKLHTSGNGNLKDVIYHIYGREIASNLIEVDFERKG 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ I+GY+ P S + F+ +++ RY+ I K + F +
Sbjct: 231 IHITGYLGKPLISRGNRNFENYFVDGRYIKSSIISKAIEDGYKDFTMQHKY--------- 281
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
P +L L D+ P K V F + + + + A+ ++
Sbjct: 282 --------PFVVLYLDVDTEHVDVNVHPTKMDVRFNNQQEIYNTLFAAVDDGLHERELIP 333
Query: 358 SFDVDMLEDAELPLESSR 375
+D ++ E P ES +
Sbjct: 334 EVTLDDIKIPEEPKESKK 351
>gi|138894827|ref|YP_001125280.1| DNA mismatch repair protein [Geobacillus thermodenitrificans
NG80-2]
gi|166232089|sp|A4IMI1.1|MUTL_GEOTN RecName: Full=DNA mismatch repair protein MutL
gi|134266340|gb|ABO66535.1| DNA mismatch repair protein MutL [Geobacillus thermodenitrificans
NG80-2]
Length = 645
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 168/363 (46%), Gaps = 27/363 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I++L + + N + +G V+ VV+ELV N++DA +T V + + ++V+D+
Sbjct: 1 MGRIHKLDDQLANKIAAGEVVERPASVVKELVENAIDAHSTAVEIELEEAGMTKIRVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ + +L ERHATSK + D D I T GFRGEAL SI+ VS +E++T
Sbjct: 61 GDGMEEEDCLLAFERHATSK---IQDEHDLFRIRTLGFRGEALPSIASVSEVELVTSTGS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G + V+KG + RK GT + +LF+N P R KYM++ ++ H+
Sbjct: 118 GP-GTKLVLKGGALVARERAAGRK--GTDITVSNLFFNTPARLKYMKTIHTELGHAA-DV 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP VSF+ LL T S +L + +G+E + + A
Sbjct: 174 VNRLALAHPDVSFRL--RHHGKTLLATNGSGDVRHVLAAIYGMETAKQMIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ GYIS P + + + + + +N RYV P+ K + + L R
Sbjct: 232 VRGYISLPEVTRASRNYMSLIVNGRYVRNIPLMKAIE------------AGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P L + L D+ P K V F + I IR A+ ++ S
Sbjct: 280 -----YPIVFLAIEMDPVLVDVNVHPAKLEVRFSKEAELNELITATIRQAFRQRTLIPSV 334
Query: 360 DVD 362
D
Sbjct: 335 SAD 337
>gi|406025702|ref|YP_006706003.1| DNA mismatch repair protein mutL [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
gi|404433301|emb|CCM10583.1| DNA mismatch repair protein mutL [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
Length = 596
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 176/368 (47%), Gaps = 37/368 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M TI+ L + + N + +G V+ VV+EL+ N++DAG+ + + + ++V+DD
Sbjct: 1 MHTIHLLSDLLINQIAAGEVVQRPASVVKELLDNAIDAGSNNIKIIIKDAGKQLIQVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ + + E+HATSK+ H DD + I T GFRGEA+ASI+ V+ +E+ T+ H
Sbjct: 61 GIGMDKVDARMCFEKHATSKIAH---TDDLSKIQTMGFRGEAMASIAAVAQVEMETRLHE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G ++GSK ++++ GT + ++LFYN P RR +++S+P + H
Sbjct: 118 AATGVFIAIEGSKI-------KKQEAISTSPGTKISVKNLFYNVPARRNFLKSNPVEFKH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+++ V AL ++ ++ + E + S ++ FG L
Sbjct: 171 ILEE-VQHAALARTEIGWRLYHNDIE---IYNLSPEKLSHRMVHLFGESYKKQLIPCKET 226
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
+ I GYI P + + Q++++N R+V K P LNH A D A + F
Sbjct: 227 TNMVAIQGYIGKPEQAKKTRGEQFLFVNQRFV-KSP---FLNH--AIKHAYDRLLATDSF 280
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
P Y + L L D+ P KT + F+D + + A ++ AI+ +
Sbjct: 281 -----------PFYAIYLTIDPKLIDINVHPTKTEIKFQDEKALYAILQAAIKKSLATHH 329
Query: 355 AHDSFDVD 362
DS D D
Sbjct: 330 VVDSLDFD 337
>gi|224536053|ref|ZP_03676592.1| hypothetical protein BACCELL_00917, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522336|gb|EEF91441.1| hypothetical protein BACCELL_00917 [Bacteroides cellulosilyticus
DSM 14838]
Length = 564
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 181/369 (49%), Gaps = 45/369 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A ++ V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQEIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ D+ + T GFRGEALAS++ V+ +E+ T+
Sbjct: 65 MSETDARLAFERHATSKIRQATDL---FALRTMGFRGEALASVAAVAEVELKTRMANEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRIVIAGSKV------ESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTE-LSNILT 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F + S D L + +++ FG + L V+ + +
Sbjct: 175 EFERIALVHPEVAFY---LYSNDTELFNLPAMPLRQRILAVFGKKLNQHLLSVDVDTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SG+++ P + A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGFVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 ----QLIPAGEQISYFIYFDVDPANIDVNIHPTKTEIKFENEQAIWQIVSAAVKESLGKF 329
Query: 354 IAHDSFDVD 362
A S D D
Sbjct: 330 NAVPSIDFD 338
>gi|429741030|ref|ZP_19274699.1| DNA mismatch repair protein [Porphyromonas catoniae F0037]
gi|429159699|gb|EKY02196.1| DNA mismatch repair protein [Porphyromonas catoniae F0037]
Length = 639
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 174/383 (45%), Gaps = 43/383 (11%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
I LPE++ N + +G V+ +V+EL+ NS+DAGA++V V + G V+V D+G
Sbjct: 4 VIRLLPESIANQIAAGEVVPAPAYIVKELLENSIDAGASEVQVEILGAGREAVQVTDNGK 63
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+S + ERHATSKL + D+D + T GFRGEALA+I+ V +E+ T+
Sbjct: 64 GMSPTDARMAFERHATSKLREIEDLDR---LSTMGFRGEALAAIASVCQVELRTRIAELE 120
Query: 122 NGYRKVMKGSK--------CLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKV- 172
G ++G++ C VGTT+ + ++FYN P RRK++++ +
Sbjct: 121 VGTELRIEGARVKSSVPVAC----------PVGTTLRAMNIFYNTPGRRKHIEARKESTE 170
Query: 173 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVN 232
L + K ++AL +P+VSF D+ L +SS +I G + L VN
Sbjct: 171 LGDIWKEFAKVALANPEVSFALRGTGKYDKAL---PASSLKERIIGIGGSKLSKALIPVN 227
Query: 233 ANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANN 292
I G+I +P ++ A QY ++N+R++ HK + F +
Sbjct: 228 YESSFCSIRGFIGTPTTALKSGAQQYFFVNNRFIRHPYFHKAVMLAYEKFIPVGTQ---- 283
Query: 293 GFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P Y L P D+ P KT V F D E + I +R A+
Sbjct: 284 -------------PHYFLYFTIPAGNIDVNIHPQKTDVRFLDGETIFQVIVSLLREAFSS 330
Query: 353 KIAHDSFDVDMLEDAELPLESSR 375
+ D D E+P R
Sbjct: 331 HALAPTIDFDQETSIEIPAYQGR 353
>gi|401564527|ref|ZP_10805414.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC6]
gi|400188737|gb|EJO22879.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC6]
Length = 633
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 176/356 (49%), Gaps = 34/356 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+ELV N++DAGAT V + + G +++V D+
Sbjct: 1 MTRIHVLDDTTINKIAAGEVVERPASVVKELVENAMDAGATAVEIEIMGGGVSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++R+ RHATSK+ ++D+ + T GFRGEAL +I+ VS ++T+
Sbjct: 61 GRGMTREDAETAILRHATSKITSVSDLQT---VATLGFRGEALPTIASVSRFLLLTRQAS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G K I+D ++GTTV DLF+N P R+K+++++ + +
Sbjct: 118 DDLGTRVDILGGKTPE--IEDAGCEIGTTVRVEDLFFNTPARKKFLKTNTTEA-GKISDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGAL 238
V+R+AL P ++F+FI+ + L + L I S +G + L ++ DG
Sbjct: 175 VIRLALSRPDIAFRFIN---NNRLTIMTAGDDSLRRTIESIYGRDAAGALIPLDFEDGDA 231
Query: 239 E--ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E I+GYIS P S +A+Q +N R + I K ++++ + GF
Sbjct: 232 EIRITGYISKPSLIRSSRAWQTYIVNGRTIQNRAIAKAIDNVYRAL------VPKMGF-- 283
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRS 348
P +L + P D+ P KT + F+D ++ V + AIRS
Sbjct: 284 ---------PLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKTVLDAIRS 330
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 50/204 (24%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1215
+ QVD +I + TL ++DQHAA ERI + L H +LS +
Sbjct: 447 IGQVDLTYIIAQSAQTLYIVDQHAAHERILFDRFSAQADGIPAQQMLVHAILSFDAHEAQ 506
Query: 1216 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
Y+D EL +G+ L G R + L
Sbjct: 507 YIDENAEL-FDRLGFHL-----------------EPAGEREYR--------------LTE 534
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV--LNSKACRGAIMFGDSLLPSEC 1333
P ++ ++ + E L L D ++ P+ LR + + ACR AI G+ L +
Sbjct: 535 APADIPLDEAEETIREILVSLGDLHAAT---PANLRQAGIATMACRAAIKAGEELNMRQM 591
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTV 1357
++++EL+ T F C HGRPT +
Sbjct: 592 EILLDELRSTPFPFTCPHGRPTIL 615
>gi|375107802|ref|ZP_09754063.1| DNA mismatch repair protein MutL [Burkholderiales bacterium
JOSHI_001]
gi|374668533|gb|EHR73318.1| DNA mismatch repair protein MutL [Burkholderiales bacterium
JOSHI_001]
Length = 622
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 165/353 (46%), Gaps = 33/353 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVV-DDGSG 62
I LP+ + + + +G V+ VV ELV N++DAGA + + + VV DDG G
Sbjct: 26 IRELPDDLVSQIAAGEVVERPASVVRELVDNALDAGARNITLRLSAGGVRAIVVEDDGCG 85
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I L L +RHATSK+ LAD++ +GT GFRGEALA+I+ V+ + I ++ G P+
Sbjct: 86 IPAAQLALALKRHATSKISDLADLES---VGTMGFRGEALAAIASVAEVAITSRMAGDPS 142
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
+R + + + GTTV R+LF++ P RRK++++ ++ H V + V R
Sbjct: 143 AHRISAHTGE-----LQPAARATGTTVEVRELFFSTPARRKFLKTDATELAHCV-EAVRR 196
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFS---FLDEVNANDGALE 239
AL P V F E +L ++ P L G + + L + GA+
Sbjct: 197 HALARPDVGFAIW---HEGKLNAQWRAAEPEQRLADVLGADFMAASRALPPLPQAFGAVR 253
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SG + P + + QY Y+N R+V +L+ H A L G R
Sbjct: 254 LSGRVGLPDAARARADMQYAYVNGRFVRD----RLVGH--------GVRAAYEDVLHGSR 301
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P+Y+L + P D+ P K V F+D V + A+ A +
Sbjct: 302 Q-----PSYVLFIDMPPQRVDVNVHPTKIEVRFRDSREVHQAVRHAVEDALAR 349
Score = 45.1 bits (105), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 27/187 (14%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L ++D HAA ERI E L+ + + A L A Q L+LP A
Sbjct: 452 LVLVDMHAAHERIVYERLKAQ------QGDAALQA-QPLLLPVAVPATPTEMATAEAHAA 504
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQ----LADTD 1300
+ ++ L++ + + + + P L D DL E L+ LA D
Sbjct: 505 TLADL----------GLDVAPLSASTLAVRSRPA----ALPDADLAELLRSVLADLAQVD 550
Query: 1301 GSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT--TVP 1358
GS + +L + AC GA+ L E ++ +++ T QC HGRPT V
Sbjct: 551 GSRVVQRARDELLATMACHGAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWRQVT 610
Query: 1359 LVNLEAL 1365
L L+AL
Sbjct: 611 LKELDAL 617
>gi|215919100|ref|NP_820082.2| DNA mismatch repair protein [Coxiella burnetii RSA 493]
gi|206583985|gb|AAO90596.2| DNA mismatch repair protein [Coxiella burnetii RSA 493]
Length = 575
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 172/362 (47%), Gaps = 41/362 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + N + +G V+ VV+EL+ NS+DA A+ + V + +++ DD
Sbjct: 1 MMYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + LVL ERHATSK +A +DD I T GFRGEALASIS VS L + ++
Sbjct: 61 GDGIHPEDLVLALERHATSK---IAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKN 117
Query: 120 RPNGYR------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
GYR K+M + GTT+ +DLFYN P RRK+++ SP
Sbjct: 118 AEMGYRISNISHKIMTPVPAAH--------PQGTTIDVQDLFYNTPARRKFLR-SPATEF 168
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
+++ + R+AL H + +F+ +E E++ S+++ I F+ A
Sbjct: 169 QHIRRIIERLALSH--FTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALA 226
Query: 234 ---NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 290
+ L + GYI+ + S QY+Y+N R+V + + L A D
Sbjct: 227 IEFSQSGLTLKGYIAEAAYTRSQPDLQYIYVNGRFVRDKLVAQALRQ--AYHDV------ 278
Query: 291 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G+ PAY+L L + D+ P K V F+D + V F+ A+++A
Sbjct: 279 ---LFHGRH------PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTAL 329
Query: 351 MK 352
+
Sbjct: 330 AQ 331
>gi|194337682|ref|YP_002019476.1| DNA mismatch repair protein MutL [Pelodictyon phaeoclathratiforme
BU-1]
gi|238693415|sp|B4SGC3.1|MUTL_PELPB RecName: Full=DNA mismatch repair protein MutL
gi|194310159|gb|ACF44859.1| DNA mismatch repair protein MutL [Pelodictyon phaeoclathratiforme
BU-1]
Length = 626
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 176/353 (49%), Gaps = 33/353 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I RLP+ V N + +G V+ VV+EL+ N++DAGA K+ V + +++VD+
Sbjct: 1 MARIARLPDIVANKISAGEVVQRPASVVKELLENAIDAGADKITVAIKDAGKELIRIVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G+G+ R+ +L ER ATSK+ + D+D + + GFRGEALASIS VS E+ T+
Sbjct: 61 GAGMLREDALLCVERFATSKITGVDDLD---SLQSLGFRGEALASISSVSHFELKTRTAK 117
Query: 120 RPNGYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R +G + G+ E+ GTT+ R+LFYN P RRK+++S+ + H + +
Sbjct: 118 ATLGLRLRYEGGVLVEESGVQGEQ---GTTISVRNLFYNVPARRKFLKSNATEYNH-IFE 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
V AL +P++ ++ M S+DE L L L +G + + + E++ + L
Sbjct: 174 IVKSFALAYPEIEWR---MYSDDEELFHVKRPDILERLNVFYGDDFAASMIELSEENDYL 230
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I GY+ P K QY ++N R V +++L S + + G L +
Sbjct: 231 SIKGYLGKPAMQKRRKLDQYFFVNRRVVQ----NRML---------SQAVQQAYGDLLVE 277
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV----LAFIERAIR 347
R P LL L S D+ P K + F D V I+RAI+
Sbjct: 278 RQ----TPFVLLFLTIDPSRIDVNVHPAKMEIRFDDERNVRNMFYPVIKRAIQ 326
Score = 40.0 bits (92), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 20/205 (9%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
K+ Q +K I + G L +IDQH A ER+ L E V++ + L Q++
Sbjct: 441 KIWQLHNKYLICQIKTG-LMIIDQHVAHERV-LYERAVDVMNQNVPNSQQLLFPQKVEFR 498
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1286
Y++ + E + G+ NL L + +I + G S+
Sbjct: 499 PWEYEIFEEIREDLYRLGF--------------NLRLFGNKTIMIEGVPQDVKPG---SE 541
Query: 1287 VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1346
V +L+ + + S + S +CR AIM G L E +++ L T
Sbjct: 542 VTILQDMIAEYQDNASKLKLDKRDNLAKSYSCRNAIMAGQKLSLEEMRSLIDNLFATREP 601
Query: 1347 FQCAHGRPTTVPLVNLEALHKQIAQ 1371
+ C HGRP + L +L+ L K +
Sbjct: 602 YSCPHGRPVIIKL-SLDQLDKMFGR 625
>gi|189502520|ref|YP_001958237.1| hypothetical protein Aasi_1174 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497961|gb|ACE06508.1| hypothetical protein Aasi_1174 [Candidatus Amoebophilus asiaticus
5a2]
Length = 628
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 164/347 (47%), Gaps = 27/347 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
+ LP+++ N + +G V+ VV+ELV N+VDA +T + V + ++V+DDG G
Sbjct: 6 VRLLPDSLANQIAAGEVIQRPASVVKELVENAVDAASTHIKVVIKDAGKTLIQVIDDGIG 65
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + E+HATSK+ + DD I T GFRGEAL SI+ ++ +EI T+
Sbjct: 66 MSEVDARMSLEKHATSKI---SQADDLFNIRTMGFRGEALPSIAAIAQVEIETRTEDAEL 122
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G R V++GSK K GTT+ ++LF+N P RR +++S P + H +++
Sbjct: 123 GTRLVVEGSKIKLQEPVATTK--GTTISVKNLFFNVPARRNFLKSEPVETKHIIEEF-QH 179
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IAL P +SF E E L ++ + L FG L ++I G
Sbjct: 180 IALARPDISFSLYQNEQETYHLPATKLANRIVHL---FGETYKKQLIPCQEGTDIIQIHG 236
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
Y+ +P + + Q+ ++N+R++ +H + D++
Sbjct: 237 YVGNPSYAKKTRGEQFFFVNNRFIKSTYLHHAVKSAFEELIPKDTF-------------- 282
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P Y+L + D+ P KT + F D V + ++ ++R A
Sbjct: 283 ---PFYVLFIEISPERIDVNVHPTKTEIKFDDERMVYSILQASVRQA 326
>gi|448734873|ref|ZP_21717093.1| DNA mismatch repair protein MutL [Halococcus salifodinae DSM 8989]
gi|445799503|gb|EMA49882.1| DNA mismatch repair protein MutL [Halococcus salifodinae DSM 8989]
Length = 724
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 167/370 (45%), Gaps = 44/370 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I+RL +A + +G V+ V+ELV NS+DA A++V V V ++V DDG G
Sbjct: 14 IHRLDQATIERIAAGEVVERPASAVKELVENSLDADASRVRVVVEAGGTDGIRVTDDGRG 73
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ + + E+H TSK+ + D++ G+G+ GFRGEALA+I VS L I TKA G
Sbjct: 74 MTAEAVERAVEKHTTSKIADIDDLE--AGVGSLGFRGEALAAIGAVSRLTIRTKARGTSR 131
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G M G + ++ GTTV DLFYN P RRKY++ + H V +
Sbjct: 132 GTELRMAGGEIES--VEPAGCPEGTTVEVEDLFYNVPARRKYLKQDATEFTH-VNRVTTG 188
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG--IEDFSFLDEVNAN------ 234
AL +P V+ E+ T S A ++S +G + + L E +A+
Sbjct: 189 YALSNPDVALAL--EHDGREVFSTTGQGSLEATILSVYGRDVAEAMILVEAHADSESDGA 246
Query: 235 ----------DGAL-EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFD 283
DG L E+SG +S P + + + V++N RYV + +
Sbjct: 247 DGGNDEERDTDGPLDELSGVVSHPETTRASPEYCSVFVNGRYVSATAVRDAI-------- 298
Query: 284 CSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIE 343
+A G L R P +L L P D+ P K + F D V +
Sbjct: 299 ----VEAYGGQLAPDR-----YPFTVLFLSLPADTIDVNVHPRKREIRFADEADVREQVR 349
Query: 344 RAIRSAWMKK 353
A+ A M++
Sbjct: 350 TAVEDALMRE 359
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 1154 IPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS 1213
+PD L +VL Q+ +I + L +IDQHAADERI E LR +V +GE
Sbjct: 515 VPDDHAFDRLPRLRVLGQLHDTYIACESPDGLVLIDQHAADERINYERLRERV-AGETAI 573
Query: 1214 VAYLD-AEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVIT 1272
D E EL E+ +L ++FA+ + + G+ + SR+ ++ +
Sbjct: 574 QELADPVEIELTAAEV--ELFESFADALAELGF------EASRADDRT----------VE 615
Query: 1273 LLAVPCIFGVNLSDVDLLEFLQQ--LADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLP 1330
+ AVP + +D D L + + D + ++ +L AC +I SL
Sbjct: 616 VRAVPAVLD-GAADPDRLRDVLSGFVGDEEPEASIERDADALLADLACYPSITGNTSLAE 674
Query: 1331 SECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
+ ++ L + C HGRP + + N E
Sbjct: 675 GDVIDLLRTLDDCENPYACPHGRPVVIEVGNDE 707
>gi|384256322|ref|YP_005400256.1| DNA mismatch repair protein [Rahnella aquatilis HX2]
gi|380752298|gb|AFE56689.1| DNA mismatch repair protein [Rahnella aquatilis HX2]
Length = 639
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 186/383 (48%), Gaps = 44/383 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IKVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARHATSKITCL---DDLEAILSLGFRGEALASISSVSRLILTSRTAEQNE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I G+TV DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTIKPAAHPQGSTVEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSS-------SSPLALLISSFGIEDFSFLDEVNAND 235
IAL VS +++ +L+ + S LA + S +E EV +
Sbjct: 178 IALARFDVS---VNLSHNGKLIRQYRAVKDRSQFSRRLASICSPAFVEHAL---EVEWSH 231
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
G L I G+++ P S S+ QY Y+N+R + +L+NH A D K +
Sbjct: 232 GDLAIRGWVADPAGSRSLTDMQYCYVNNRMMKD----RLINH-AIRQAYQDQLKDDQQ-- 284
Query: 296 KGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
PAY+L L PH + D+ P K V F V FI +A+ S +
Sbjct: 285 ----------PAYVLYLDVDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQAVMSVLQQAG 333
Query: 355 AHDSFDVDMLEDAELPLESSRFQ 377
A +L++ +L ++ R+Q
Sbjct: 334 A------PVLDEPQLQEDTPRWQ 350
>gi|303232202|ref|ZP_07318905.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-049-V-Sch6]
gi|302513308|gb|EFL55347.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-049-V-Sch6]
Length = 652
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 181/355 (50%), Gaps = 34/355 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGV-CNCYVKVVDD 59
M TI+ L E N + +G V+ VV+EL+ NS+DAGAT + V +G + Y+++ D+
Sbjct: 1 MATIHVLDETTINKIAAGEVVERPASVVKELIENSIDAGATSIEVEIGEGGSAYMRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + L RHATSK+ ++ D+ D I + GFRGEALASI+ VS + T+
Sbjct: 61 GKGMTEEDARLAVLRHATSKIQNVEDLFD---IASLGFRGEALASIASVSHFVLTTRTVD 117
Query: 120 RPNGYRKVMKG---SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+ G R ++ G + C+ G GTT+ ++LF+N P RRK++++ + +
Sbjct: 118 QELGTRILIDGGTFTDCIPYGAAP-----GTTIEVKELFFNTPARRKFLKTE-RTESSKI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDEL-LCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
+ V ++AL +P ++FK + +D + + T SSS + + +G + + + +
Sbjct: 172 QDIVGKLALSNPHIAFK---LTIDDRVAIITPGSSSIQDTVAALYGYKTKNDIFPIAYES 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
+ I G +S P S + +Q + +N+R + I K ++ + + +G+
Sbjct: 229 EHIYIEGVVSKPTLLKSTRIWQTIIVNNRVISDKTILKAID------NAYHALLPKSGY- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
P LL++ P S+ D+ P K+ V F+D + + + AI +A
Sbjct: 282 ----------PLVLLHITVPASMVDINVHPRKSEVKFEDDKIIFKAVYHAILNAL 326
>gi|288924573|ref|ZP_06418510.1| DNA mismatch repair protein MutL [Prevotella buccae D17]
gi|288338360|gb|EFC76709.1| DNA mismatch repair protein MutL [Prevotella buccae D17]
Length = 621
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 176/371 (47%), Gaps = 27/371 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV NSVDAGAT + V V ++V D+G G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGATVINVLVVDAGRTSIQVTDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSDTDARLSFERHATSKIRQ---ADDLFALHTMGFRGEALASIAAVAQVELKTRQQSDEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + + GS+ +LG + VG+ +LF+N P RRK+++S+ + L+++ R
Sbjct: 122 GTQLTIAGSR--FLGQEPCSCPVGSNFKVENLFFNVPARRKFLKSNTTE-LNNIIAAFQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I LV+P +SF + S D L + + ++ FG L VN I G
Sbjct: 179 IVLVYPALSFT---LHSNDTELINLRAGNLRQRIVDVFGKRLNQDLLSVNVETTLCSIHG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A QY ++N RY+ K P KA + +
Sbjct: 236 FVGKPESARKKGAHQYFFVNGRYM-KHPYFA---------------KAVMSAFERLVPQG 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
+ P +L P ++ D+ P KT + F++ + + + A+R A + D D
Sbjct: 280 EQVPFFLYFEVAPENI-DVNIHPTKTEIKFENEQAIWQILSAAVREAVGMFNDVPAIDFD 338
Query: 363 MLEDAELPLES 373
+ ++P+ S
Sbjct: 339 TVGKPDIPVFS 349
>gi|345866843|ref|ZP_08818864.1| DNA mismatch repair MutL family protein [Bizionia argentinensis
JUB59]
gi|344048763|gb|EGV44366.1| DNA mismatch repair MutL family protein [Bizionia argentinensis
JUB59]
Length = 617
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 173/349 (49%), Gaps = 35/349 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DA A+ + + V V+V+D+GSG
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELIENAIDAKASVIKLLVKDAGKTLVQVIDNGSG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S ERHATSK+ DD + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSITDARFSFERHATSKI---KTADDLFKLNTKGFRGEALASIAAIAHVELKTKQEHEDV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + +++GS+ E++ V GT++ ++LF+N P RR +++S+ ++ H + +
Sbjct: 122 GTQIIIEGSEV------KEQEVVVTPTGTSIAVKNLFFNIPARRNFLKSNTVELRHIIDE 175
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
R+AL HP + F SE +S+ +++ FG + L VN L
Sbjct: 176 F-HRVALAHPTIQFSMYHNGSES---FQLPASNFRQRIVNIFGAKTNEKLVPVNETTEVL 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+SG++ P + + Q+ ++N+R++ ++ +N ++FD G LK
Sbjct: 232 TVSGFVGKPEYAKKTRGEQFFFVNNRFIKSAYLNHAIN---SAFD---------GLLKDG 279
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
S Y L+L D+ P KT + F D + A + A++
Sbjct: 280 THAS-----YFLDLTVNPQTIDINIHPTKTEIKFDDEHTLYAILRAAVK 323
>gi|288803871|ref|ZP_06409296.1| DNA mismatch repair protein MutL [Prevotella melaninogenica D18]
gi|288333636|gb|EFC72086.1| DNA mismatch repair protein MutL [Prevotella melaninogenica D18]
Length = 630
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 169/348 (48%), Gaps = 31/348 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV N++DAGAT + + V ++V+DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGATHIDVLVVDAGRTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK + DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSK---IRKADDLFSLRTMGFRGEALASIAAVAQIELKTRMESEDL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + GS+ ++G + VG+ + +LF+N P RRK+++S+ + L+++ R
Sbjct: 122 GTHLSIAGSR--FMGQEPCSCPVGSNFLVENLFFNVPARRKFLKSNTTE-LNNIITAFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I LV+P++SF +E L CS ++ FG L ++ + I G
Sbjct: 179 IVLVYPQISFTLHSNGTELFSLRACSYRQ---RIVEVFGKRLNQDLLPIDVDTSLCHIHG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + QY ++N RY+ HK + +FD +
Sbjct: 236 FVGKPESARKKAPHQYFFVNDRYMKHPYFHK---AVITAFD-------------RLIPQG 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAI 346
+ P Y L P D+ P KT + F++ W+ +LA ++ A+
Sbjct: 280 EQVP-YFLYFDVPAENIDVNIHPTKTEIKFENEQAIWQILLAAVKEAV 326
>gi|196247547|ref|ZP_03146249.1| DNA mismatch repair protein MutL [Geobacillus sp. G11MC16]
gi|196212331|gb|EDY07088.1| DNA mismatch repair protein MutL [Geobacillus sp. G11MC16]
Length = 645
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 168/363 (46%), Gaps = 27/363 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I++L + + N + +G V+ VV+ELV N++DA +T V + + ++V+D+
Sbjct: 1 MGRIHKLDDQLANKIAAGEVVERPASVVKELVENAIDAHSTAVEIELEEAGMTKIRVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ + +L ERHATSK + D D I T GFRGEAL SI+ VS +E++T
Sbjct: 61 GDGMEEEDCLLAFERHATSK---IQDEHDLFRIRTLGFRGEALPSIASVSEVELVTSTGS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G + V+KG + RK GT + +LF+N P R KYM++ ++ H+
Sbjct: 118 GP-GTKLVLKGGALVARERAAGRK--GTDITVSNLFFNTPARLKYMKTIHTELGHAA-DV 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP VSF+ LL T S +L + +G+E + + A
Sbjct: 174 VNRLALAHPDVSFRL--RHHGKTLLATNGSGDVRHVLAAIYGMETAKQMIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ GYIS P + + + + + +N RYV P+ K + + L R
Sbjct: 232 VRGYISLPEVTRASRNYMSLIVNGRYVRNIPLMKAIE------------AGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P L + L D+ P K V F + I IR A+ ++ S
Sbjct: 280 -----YPIVFLAIEMDPVLVDVNVHPAKLEVRFSKEAELNELITATIRQAFRQRTLIPSV 334
Query: 360 DVD 362
D
Sbjct: 335 SAD 337
>gi|406658846|ref|ZP_11066986.1| DNA mismatch repair protein HexB [Streptococcus iniae 9117]
gi|405579061|gb|EKB53175.1| DNA mismatch repair protein HexB [Streptococcus iniae 9117]
Length = 652
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 168/350 (48%), Gaps = 32/350 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA + ++ + + +K+ D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPASVVKELVENAIDAKSNQITIEIEESGLKSIKITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S+D L L RHATSK+ + +D+ I T GFRGEAL SI+ +S L I T
Sbjct: 61 GEGMSKDDLPLSILRHATSKIKNQSDL---FRIRTLGFRGEALPSIASISELTIETATED 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + KG K +D VGT + +LFYN P R KYM+S ++ H V
Sbjct: 118 SSHGSILMSKGGKV--EKVDVISTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGAL 238
V R++L HP+V+F I + L S + L I+ +G+ + E++ D
Sbjct: 175 VNRLSLGHPEVAFTLI---CDGRELTKTSGTGDLKQAIAGIYGLNTAKKMVEISNADLDF 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
E+SGY+S P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVSGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRAILDGY 272
Query: 299 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
SK P +++++ L D+ P K V + ++A I AI
Sbjct: 273 GSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKEKELMALISSAI 322
>gi|148543761|ref|YP_001271131.1| DNA mismatch repair protein [Lactobacillus reuteri DSM 20016]
gi|184153167|ref|YP_001841508.1| DNA mismatch repair protein [Lactobacillus reuteri JCM 1112]
gi|325682133|ref|ZP_08161651.1| DNA mismatch repair protein HexB [Lactobacillus reuteri MM4-1A]
gi|167017343|sp|A5VIX0.1|MUTL_LACRD RecName: Full=DNA mismatch repair protein MutL
gi|229486324|sp|B2G6E6.1|MUTL_LACRJ RecName: Full=DNA mismatch repair protein MutL
gi|148530795|gb|ABQ82794.1| DNA mismatch repair protein MutL [Lactobacillus reuteri DSM 20016]
gi|183224511|dbj|BAG25028.1| DNA mismatch repair protein HexB [Lactobacillus reuteri JCM 1112]
gi|324978777|gb|EGC15726.1| DNA mismatch repair protein HexB [Lactobacillus reuteri MM4-1A]
Length = 668
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 181/373 (48%), Gaps = 34/373 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L + N + +G V+ +V+ELV NS+DA + +V + V V+V+DD
Sbjct: 1 MGKIHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + + L RHATSK+ D+ + T GFRGEAL SI+ V+ + + T G
Sbjct: 61 GDGIAAEDISLAFHRHATSKINSRHDL---FKVQTMGFRGEALPSIASVADVTLTTAQAG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ G ++G K L + R+ GT + DLF+N P R KY++ SP+ L +
Sbjct: 118 QEEGTMIHLRGGKELVVKPAGARQ--GTDIKVTDLFFNTPARLKYLK-SPQTELTRITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL +P V+F F + EL + +++ ++ + +G++ + E++ D +
Sbjct: 175 INRLALANPAVAFSF--THNGRELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDDFK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SG++S P + + + + + IN RY+ +++ ++G
Sbjct: 233 VSGFVSLPELTRASRQYITITINHRYIR-------------------NFELTKAIIQGYE 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++N+ L D+ P K V + ++ I IR ++IA +
Sbjct: 274 SKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLIKLIAETIR----QRIAVE 329
Query: 358 SFDVDMLEDAELP 370
+ D+ D +P
Sbjct: 330 NLIPDVDADQFIP 342
>gi|317504763|ref|ZP_07962723.1| DNA mismatch repair protein MutL [Prevotella salivae DSM 15606]
gi|315664145|gb|EFV03852.1| DNA mismatch repair protein MutL [Prevotella salivae DSM 15606]
Length = 610
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 171/369 (46%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV NSVDAGA + + V + V DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGAKNIQIQVIDAGKTTILVTDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK + DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSATDARLSFERHATSK---IRKADDLFALHTMGFRGEALASIAAVAQIELKTRQESDEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + GS+ ++G + VG++ +LFYN P RRK+++S+ + L+++ R
Sbjct: 122 GTLLSISGSR--FVGQEPCSCAVGSSFSVNNLFYNVPARRKFLKSNSTE-LNNIITAFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
IALV+P ++F ++S L + +I FG L V + I+G
Sbjct: 179 IALVYPDIAFT---LQSNGTELFNLKAGVLRQRIIDIFGKRLNQELLSVKVDTTMCRING 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
Y+ P + A QY ++N RY+ H N KA +
Sbjct: 236 YVGKPESARKKGAHQYFFVNGRYMK----HPYFN------------KAVMAAFERLVPTG 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
+ P +L P + D+ P KT + F++ P+ + A++ A S D D
Sbjct: 280 EQVPYFLYFEVAPKDI-DVNIHPTKTEIKFENEVPIWQILSAAVKEAVSMFNDIPSIDFD 338
Query: 363 MLEDAELPL 371
E+P+
Sbjct: 339 TEGRPEIPV 347
>gi|261345217|ref|ZP_05972861.1| DNA mismatch repair protein MutL [Providencia rustigianii DSM 4541]
gi|282566912|gb|EFB72447.1| DNA mismatch repair protein MutL [Providencia rustigianii DSM 4541]
Length = 651
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 171/373 (45%), Gaps = 51/373 (13%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDDGS 61
+I L + N + +G V+ VV+ELV NS+D+GAT++ + + ++V D+G
Sbjct: 2 SIQILSPQLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIERGGEKLIRVRDNGC 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI++D LVL RHATSK +A +DD I + GFRGEALASIS V+ L + +K +
Sbjct: 62 GINKDELVLALARHATSK---IATLDDLEAIMSMGFRGEALASISSVARLTLTSKPAEQT 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ +G + + + + GTTV DLFYN P RRK+M++ + H + + V
Sbjct: 119 EAWQSYAEG-RDMQVTVKPAAHPNGTTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEIVR 176
Query: 182 RIALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 227
RIAL P V+ D++ E L C + F +
Sbjct: 177 RIALSRPDVAINLTHNGKLVKQYRAAHDDIQQERRLGAICG---------TGFMQGALAL 227
Query: 228 LDEVNANDGALEISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSD 286
L E L I G++ SP S V + QY Y+N R + KL+NH
Sbjct: 228 LWE----HSDLAIKGWVVSPSSSHHVASDIQYCYVNGRMMRD----KLINHAIR------ 273
Query: 287 SWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
+A G L + PAY+L L D+ P K V F V FI +A+
Sbjct: 274 --QAYEGHLDENQQ-----PAYVLYLTIDPKQVDVNVHPAKHEVRFHQARLVHDFIYQAV 326
Query: 347 RSAWMKKIAHDSF 359
R+ + A D
Sbjct: 327 RTVLLNTTAVDQL 339
>gi|315607435|ref|ZP_07882431.1| DNA mismatch repair protein MutL [Prevotella buccae ATCC 33574]
gi|315250867|gb|EFU30860.1| DNA mismatch repair protein MutL [Prevotella buccae ATCC 33574]
Length = 621
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 176/371 (47%), Gaps = 27/371 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV NSVDAGAT + V V ++V D+G G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGATVINVLVVDAGRTSIQVTDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSDTDARLSFERHATSKIRQ---ADDLFALHTMGFRGEALASIAAVAQVELKTRQQSDEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + + GS+ +LG + VG+ +LF+N P RRK+++S+ + L+++ R
Sbjct: 122 GTQLTIAGSR--FLGQEPCSCPVGSNFKVENLFFNVPARRKFLKSNTTE-LNNIIAAFQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I LV+P +SF + S D L + + ++ FG L VN I G
Sbjct: 179 IVLVYPALSFT---LHSNDTELINLRAGNLRQRIVDVFGKRLNQDLLSVNVETTLCSIHG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A QY ++N RY+ K P KA + +
Sbjct: 236 FVGKPESARKKGAHQYFFVNGRYM-KHPYFA---------------KAVMSAFERLVPQG 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
+ P +L P ++ D+ P KT + F++ + + + A+R A + D D
Sbjct: 280 EQVPFFLYFEVAPENI-DVNIHPTKTEIKFENEQAIWQILSAAVREAVGMFNDVPAIDFD 338
Query: 363 MLEDAELPLES 373
+ ++P+ S
Sbjct: 339 TVGKPDIPVFS 349
>gi|383757329|ref|YP_005436314.1| DNA mismatch repair protein MutL [Rubrivivax gelatinosus IL144]
gi|381377998|dbj|BAL94815.1| DNA mismatch repair protein MutL [Rubrivivax gelatinosus IL144]
Length = 629
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 165/345 (47%), Gaps = 32/345 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVV-DDGSG 62
I LP+ + + + +G V+ VV ELV N++DAGA V V + VV DDG G
Sbjct: 10 IRELPDELVSQIAAGEVVERPASVVRELVDNALDAGARAVVVRLAAGGVRSIVVEDDGCG 69
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + L L +RHATSK+G L +++ + T GFRGEALA+I+ VS + I ++ +
Sbjct: 70 IPMEELPLALKRHATSKIGSLGELES---VRTMGFRGEALAAIASVSEMAITSRNADAAH 126
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G+R + + + + GTTV +LF++ P RRK+++S ++ H++ V R
Sbjct: 127 GWRVDARSGE-----LQPAARAQGTTVEVHELFFSTPARRKFLKSEATELAHAL-DAVRR 180
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
AL P V F E + ++ L G E + + A G L ++G
Sbjct: 181 HALARPDVGFAVWH---EGRAVAQWRAAGTEQRLADVLGREFVAASRPLEAAAGPLRLTG 237
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKRSK 301
P + S QY+++N RYV +L++H + A+++ L G +
Sbjct: 238 RAGQPEAARSRTDLQYLFVNGRYVRD----RLVSHAIRAAYEDQ---------LHGSKQ- 283
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
PAY L L L D+ P K V F+D V ++RA+
Sbjct: 284 ----PAYALFLEIEPELVDVNVHPTKIEVRFRDGRAVHQAVQRAV 324
>gi|119946846|ref|YP_944526.1| DNA mismatch repair protein MutL [Psychromonas ingrahamii 37]
gi|171769133|sp|A1SZL2.1|MUTL_PSYIN RecName: Full=DNA mismatch repair protein MutL
gi|119865450|gb|ABM04927.1| DNA mismatch repair protein MutL [Psychromonas ingrahamii 37]
Length = 628
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 166/355 (46%), Gaps = 52/355 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVDDGS 61
I L + N + +G V+ VV+EL+ NS+DAGATK+ + + G C ++V D+G+
Sbjct: 3 IQILAARLANQIAAGEVVERPASVVKELIENSLDAGATKIEIDIEKGGAKC-IRVKDNGA 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+ ++ L L RHATSK+ HL DD I + GFRGEALAS+S VS L +K +
Sbjct: 62 GVCQEQLTLALSRHATSKISHL---DDLEAIVSLGFRGEALASVSSVSRLTFTSKPADQE 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ + +G + + + I GTTV DLF+N P RR+++++ + H + + +
Sbjct: 119 QAWQAIAEG-RDMQVTIQPAAHPQGTTVEVLDLFFNTPARRRFLKTEKTEFQH-IDELIR 176
Query: 182 RIALVHPKVSFKF--------------IDMESEDELLCTCSSSSPLALLISSFGIEDFSF 227
RIAL +++F + E L CS S + S+ ++
Sbjct: 177 RIALSRFEITFVLKHNHKIVHQYRATQTQSQQEKRLASICSES----FVSSALYFQN--- 229
Query: 228 LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
+D AL+ISG++S + S QY YIN R + KL+NH
Sbjct: 230 ------SDNALKISGWVSDKLSARSSNDVQYCYINGRVIRD----KLINHAIKQVYAY-- 277
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 342
+GK PAY++ + C D+ P K V F V FI
Sbjct: 278 -----SLPQGK------FPAYVIYIECDPDQVDVNVHPSKHEVRFHQARWVHDFI 321
>gi|410458688|ref|ZP_11312445.1| DNA mismatch repair protein [Bacillus azotoformans LMG 9581]
gi|409931038|gb|EKN68026.1| DNA mismatch repair protein [Bacillus azotoformans LMG 9581]
Length = 624
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 192/409 (46%), Gaps = 37/409 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I +L + N + +G V+ VV+ELV N++DAG+T++ ++V ++++D+
Sbjct: 1 MGRIKQLDHQLSNKIAAGEVIERPASVVKELVENAIDAGSTRIEIHVKEAGLSEIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +L ERHATSK + D +D I T GFRGEAL SI+ VS+LE+ +
Sbjct: 61 GDGIEPEDCLLAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSVLEMKSSTGE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P Y K+ G ++ + GT ++ +LF+N P R KYM++ + L ++
Sbjct: 118 GPGTYIKLKGGHIEIHESTASRK---GTEIIVSNLFFNTPARLKYMKTVHTE-LGNITDY 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ RIAL HP++S + + + +L T + L +L S +G+ + + E
Sbjct: 174 LNRIALAHPEISLQL--THNGNRILFTSGNGDVLQVLASIYGMSIAKQMLPLKLESIDFE 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ GYI+ P + + + + IN R++ + K + + + L R
Sbjct: 232 VKGYIARPEVTRASRNYISTIINGRFIKNYALAKAIQ------------EGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
P LLN+ L D+ P K V + I I++A+ K+ +
Sbjct: 280 -----YPIVLLNIEMDPLLVDVNVHPAKLEVRLSKEHELCDLITEGIKTAFRKQ----TL 330
Query: 360 DVDMLEDAELP------LESSRFQSHQSSTHLHSSPLKNLAKQRDHMFH 402
D+L+ + P ++ F+ T + PL+ + + + + FH
Sbjct: 331 IPDVLKPKKEPKRPVSEQQTISFEHRFPDTLIMERPLQEVIETKANPFH 379
>gi|227554584|ref|ZP_03984631.1| DNA mismatch repair protein [Enterococcus faecalis HH22]
gi|227176261|gb|EEI57233.1| DNA mismatch repair protein [Enterococcus faecalis HH22]
Length = 710
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 171/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQKLSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|429737002|ref|ZP_19270876.1| DNA mismatch repair protein [Selenomonas sp. oral taxon 138 str.
F0429]
gi|429153636|gb|EKX96414.1| DNA mismatch repair protein [Selenomonas sp. oral taxon 138 str.
F0429]
Length = 633
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 175/356 (49%), Gaps = 34/356 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+ELV N++DAGAT V + + G +++V D+
Sbjct: 1 MTRIHVLDDTTINKIAAGEVVERPASVVKELVENAMDAGATAVEIEIMGGGVSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R+ RHATSK+ ++D+ + T GFRGEAL +I+ VS ++T+
Sbjct: 61 GRGMMREDAETAILRHATSKITSVSDLQT---VATLGFRGEALPTIASVSRFSLLTRQAS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G K I+D ++GTTV DLF+N P R+K+++++ + +
Sbjct: 118 DDLGTRVDILGGKTPE--IEDAGCEIGTTVRVEDLFFNTPARKKFLKTNTTEA-GKISDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGAL 238
V+R+AL P ++F+FI+ + L + L I S +G + L ++ DG
Sbjct: 175 VIRLALSRPDIAFRFIN---NNRLTIMTAGDDSLRRAIESIYGRDAAGALIPLDFEDGDA 231
Query: 239 E--ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E I+GYIS P S +A+Q +N R + I K ++++ + GF
Sbjct: 232 EIRITGYISKPSLIRSSRAWQTYIVNGRTIQNRAIAKAIDNVYRAL------VPKMGF-- 283
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRS 348
P +L + P D+ P KT + F+D ++ V + AIRS
Sbjct: 284 ---------PLAVLRIEVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKSVLDAIRS 330
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 50/204 (24%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1215
+ QVD +I + TL ++DQHAA ERI + L H +LS +
Sbjct: 447 IGQVDLTYIIAQSAQTLYIVDQHAAHERILFDRFSAQADGIPSQQMLVHAILSFDAHEAQ 506
Query: 1216 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
Y+D EL +G+ L G R + L
Sbjct: 507 YIDENAEL-FDRLGFHL-----------------EPAGEREYR--------------LTE 534
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV--LNSKACRGAIMFGDSLLPSEC 1333
P ++ ++ + E L L D ++ P+ LR + + ACR AI G+ L +
Sbjct: 535 APADIPLDEAEETIREILVSLGDLHAAT---PANLRQAGIATMACRAAIKAGEELNVRQM 591
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTV 1357
++++EL+ T F C HGRPT +
Sbjct: 592 EILLDELRSTPFPFTCPHGRPTIL 615
>gi|433463732|ref|ZP_20421274.1| DNA mismatch repair protein [Halobacillus sp. BAB-2008]
gi|432187174|gb|ELK44501.1| DNA mismatch repair protein [Halobacillus sp. BAB-2008]
Length = 618
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 173/354 (48%), Gaps = 27/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I +P+ + N + +G V+ VV+EL+ NS+DAGA+ + V + +++ DD
Sbjct: 1 MARIRLMPDHLANKIAAGEVVERPASVVKELIENSIDAGASWIKVELLEAGLERIRITDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSG+ + RHATSK + D +D + T GFRGEALASI+ VS L + T G
Sbjct: 61 GSGMEEEDCERAFLRHATSK---IKDENDLFHVRTLGFRGEALASIAAVSRLTVQTST-G 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + ++G K L D RK GT + +LFYN P R KYM++ ++ H V
Sbjct: 117 DAAGTKLTLEGGKLLSKTKSDARK--GTDITVDELFYNTPARLKYMKTIHTELGH-VTDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL HP+V + + + +E ++ T L ++ + +G+ + + A + +
Sbjct: 174 LNRVALAHPEV--QILCVHNEKQIFKTNGRGDLLQVVANIYGMNVARKMVPIEAENADFK 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+G+I+ P + + + IN R++ P++K + + + L +
Sbjct: 232 ITGFIAKPEVYRASRNYMSTIINGRFIRSIPLNKAV------------LQGYHTLLPIGK 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
S P +LN+ L D+ P K V F + + +E IR A+ K+
Sbjct: 280 S-----PIVVLNIDMDPILVDVNVHPSKLEVRFSKEKELFGLLEDTIRQAFRKQ 328
>gi|402307173|ref|ZP_10826200.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella
sp. MSX73]
gi|400379013|gb|EJP31862.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella
sp. MSX73]
Length = 621
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 175/369 (47%), Gaps = 27/369 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV NSVDAGAT + V V ++V D+G G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGATVINVLVVDAGRTSIQVTDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSDTDARLSFERHATSKIRQ---ADDLFALHTMGFRGEALASIAAVAQVELKTRQQSDEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + + GS+ +LG + VG+ +LF+N P RRK+++S+ + L+++ R
Sbjct: 122 GTQLTIAGSR--FLGQEPCSCPVGSNFKVENLFFNVPARRKFLKSNTTE-LNNIIAAFQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I LV+P +SF + S D L + + ++ FG L VN I G
Sbjct: 179 IVLVYPALSFT---LHSNDTELINLRAGNLRQRIVDVFGKRLNQDLLSVNVETTLCSIHG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + A QY ++N RY+ K P KA + +
Sbjct: 236 FVGKPESARKKGAHQYFFVNGRYM-KHPYFA---------------KAVMSAFERLVPQG 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
+ P +L P ++ D+ P KT + F++ + + + A+R A + D D
Sbjct: 280 EQVPFFLYFEVAPENI-DVNIHPTKTEIKFENEQAIWQILSAAVREAVGMFNDVPAIDFD 338
Query: 363 MLEDAELPL 371
+ ++P+
Sbjct: 339 TVGKPDIPV 347
>gi|256828082|ref|YP_003156810.1| DNA mismatch repair protein MutL [Desulfomicrobium baculatum DSM
4028]
gi|256577258|gb|ACU88394.1| DNA mismatch repair protein MutL [Desulfomicrobium baculatum DSM
4028]
Length = 610
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 178/386 (46%), Gaps = 45/386 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVDDGS 61
I LP ++N + +G V+ + V++ELV N++DAGAT++ + + G +C ++V D+GS
Sbjct: 7 IRLLPPELQNQIAAGEVVERPSSVLKELVENALDAGATRIRIQIRDGGQSC-IRVSDNGS 65
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI D L L RHATSKL +L+D+ I +FGFRGEAL SI+ VS I + H
Sbjct: 66 GIFEDQLELAVTRHATSKLQNLSDLQH---INSFGFRGEALPSIASVSRFRIASARHDGD 122
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC-- 179
G +V+ G L D GT V DLF N P R K++ KK +KC
Sbjct: 123 GGVLEVLHGR---ILRQDKTAMPKGTDVEINDLFSNVPARLKFL----KKPGTETRKCAE 175
Query: 180 -VLRIALVHPKVSFKFIDME-SEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
V RIAL +P V F+ ++ + + L + LA + +E L V+ DG
Sbjct: 176 LVARIALANPHVDFELVNADRTVHRFLAAQDLTQRLAAIWPQEVVES---LHGVDFKDGE 232
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
L + G + P + VY+N+R V I S +A G + G
Sbjct: 233 LSVHGLVGDPAMAQGRPDRILVYVNARPVQDKTI------------LSAIREAYRGRILG 280
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
K P ++ L P D+ P KT V F+D + I RA+ + + H
Sbjct: 281 KE-----YPQAVIFLEIPPDEVDVNVHPAKTEVRFQDDGAIFRIIRRAVLQTLERNV-HQ 334
Query: 358 SFDVDMLED-------AELPLESSRF 376
+ ++ + A LP+ RF
Sbjct: 335 THAIEHAQPLSVSQVHASLPVMEPRF 360
>gi|188535087|ref|YP_001908884.1| DNA mismatch repair protein [Erwinia tasmaniensis Et1/99]
gi|238689721|sp|B2VCU8.1|MUTL_ERWT9 RecName: Full=DNA mismatch repair protein MutL
gi|188030129|emb|CAO98015.1| DNA mismatch repair protein [Erwinia tasmaniensis Et1/99]
Length = 611
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 174/382 (45%), Gaps = 52/382 (13%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G
Sbjct: 2 AIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNGC 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI++D L + RHATSK + +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 62 GIAKDELAMALARHATSK---ITSLDDLEAIISLGFRGEALASISSVSRLTLTSRTEAQT 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + +
Sbjct: 119 EAWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEIIR 176
Query: 182 RIALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 227
RIALV V+ D + E L C G S
Sbjct: 177 RIALVRFDVAISLTHNGKLVRQYRAVSDDGQRERRLGAIC-------------GTAFLSH 223
Query: 228 LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
+++ G L + G+++ P S ++ QY Y+N R + +L+NH A D
Sbjct: 224 ALKIDWQHGELSLHGWVADPSGSKALSELQYCYVNGRMMRD----RLINH-AIRQAYEDK 278
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G R + PAY+L L PH + D+ P K V F V FI + +
Sbjct: 279 L--------GDRHQ----PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 325
Query: 347 RSAWMKKIAHDSFDVDMLEDAE 368
S + A ++ + AE
Sbjct: 326 VSVLQESGAETLPEIATAQPAE 347
>gi|399156290|ref|ZP_10756357.1| DNA mismatch repair protein [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 652
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 197/408 (48%), Gaps = 38/408 (9%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
++ LPE++ N + +G V+ VV+EL+ N++DAGAT++ V + + ++D+G
Sbjct: 10 SVRILPESLINKIAAGEVVERPASVVKELLENAIDAGATEIQVSIKNGGKDLISILDNGC 69
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G++ L ERHATSK + + +D I T GFRGEALASI+ +S EI+T
Sbjct: 70 GMNESDAQLAVERHATSK---IINEEDLFRIRTLGFRGEALASIAAISHFEILTCNDETQ 126
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
R +KG +G K GT V LFYN P R K+++++ ++ H +++ ++
Sbjct: 127 GATRIFIKGGYLEQVGKIGFPK--GTKVTVERLFYNTPARLKFLKTTATELQH-IQQHLV 183
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFS-FLDEVNANDGALEI 240
+ +L +P + F+ + +LL S L I E+F L V + L+
Sbjct: 184 QKSLAYPHIHFR---LTHNRQLLLNLSGGQALETRIHQLYGEEFKEILMPVKHKETYLQF 240
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SG+IS P + + +QY+++N R V K P +NH D + G KG+
Sbjct: 241 SGFISFPSKPRTSRRWQYIFVNERNV-KSPS---INH-----GIYDGYGTFLG--KGQH- 288
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF----IERAIRSAWMKKI-- 354
P + LNLR + D+ P KT + F++ + V I RA++ ++
Sbjct: 289 -----PVFFLNLRIDPTEIDVNVHPAKTEIRFRNNQLVHTILVDQISRALKEGASRRFFG 343
Query: 355 ---AHDSFD-VDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRD 398
+H ++ ELP+E SS + S+ K +++ RD
Sbjct: 344 REHSHSQMSRTELSGQIELPMEDPLTLGSPSSGMMFSTNKKRISEVRD 391
>gi|385873610|gb|AFI92130.1| DNA mismatch repair protein mutL [Pectobacterium sp. SCC3193]
Length = 661
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 171/358 (47%), Gaps = 32/358 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHATSKITTL---DDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGAL 238
IAL V+ I + +L+ ++ + G I +FL V+ L
Sbjct: 178 IALARFDVA---ITLHHNGKLMRQYRAAPDKSQYERRLGTICGATFLQHALAVSWQHDDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P + + QY Y+N R + +L+NH +
Sbjct: 235 TIHGWVADPVGAKQLPDMQYCYVNQRMMRD----RLINH-----------AIRQAYQDQL 279
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
R Q PAY+L L PH + D+ P K V F V FI +A+ S + A
Sbjct: 280 RDDQQ--PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMSVLQQASA 334
>gi|227363259|ref|ZP_03847391.1| DNA mismatch repair protein [Lactobacillus reuteri MM2-3]
gi|227071715|gb|EEI10006.1| DNA mismatch repair protein [Lactobacillus reuteri MM2-3]
gi|290558719|gb|ADD37853.1| DNA mismatch repair protein HexB [Lactobacillus reuteri]
Length = 668
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 181/373 (48%), Gaps = 34/373 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L + N + +G V+ +V+ELV NS+DA + +V + V V+V+DD
Sbjct: 1 MGKIHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + + L RHATSK+ D+ + T GFRGEAL SI+ V+ + + T G
Sbjct: 61 GDGIAAEDISLAFHRHATSKINSRHDL---FKVQTMGFRGEALPSIASVADVTLTTAQAG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ G ++G K L + R+ GT + DLF+N P R KY++ SP+ L +
Sbjct: 118 QEEGTMIHLRGGKELVVKPAGARQ--GTDIKVTDLFFNTPARLKYLK-SPQTELTRITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL +P V+F F + EL + +++ ++ + +G++ + E++ D +
Sbjct: 175 INRLALANPAVAFSF--THNGRELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDDFK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SG++S P + + + + + IN RY+ +++ ++G
Sbjct: 233 VSGFVSLPELTRASRQYITITINHRYIR-------------------NFELTKAIIQGYE 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++N+ L D+ P K V + ++ I IR ++IA +
Sbjct: 274 SKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLIKLIAETIR----QRIAVE 329
Query: 358 SFDVDMLEDAELP 370
+ D+ D +P
Sbjct: 330 NLIPDVDADQFIP 342
>gi|383188399|ref|YP_005198527.1| DNA mismatch repair protein MutL [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371586657|gb|AEX50387.1| DNA mismatch repair protein MutL [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 638
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 186/383 (48%), Gaps = 44/383 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IKVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARHATSKITCL---DDLEAILSLGFRGEALASISSVSRLILTSRTAEQNE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + G+TV DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMTVTVKPAAHPQGSTVEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSS-------SSPLALLISSFGIEDFSFLDEVNAND 235
IAL VS +++ +L+ + S LA + S +E EV +
Sbjct: 178 IALARFDVS---VNLSHNGKLIRQYRAVKDPSQFSRRLASICSPTFVEHAL---EVEWSH 231
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
G L I G+++ P S S+ QY Y+N+R + +L+NH A D K +
Sbjct: 232 GDLAIRGWVADPAGSRSLTEMQYCYVNNRMMKD----RLINH-AIRQAYQDQLKDDQQ-- 284
Query: 296 KGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
PAY+L L PH + D+ P K V F V FI +A+ S +
Sbjct: 285 ----------PAYVLYLDVDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQAVMSVLQQAG 333
Query: 355 AHDSFDVDMLEDAELPLESSRFQ 377
A +L++ +L ++ R+Q
Sbjct: 334 A------PVLDEPQLQEDTPRWQ 350
>gi|337280249|ref|YP_004619721.1| DNA mismatch repair protein mutL [Ramlibacter tataouinensis TTB310]
gi|334731326|gb|AEG93702.1| Candidate DNA mismatch repair protein mutL [Ramlibacter
tataouinensis TTB310]
Length = 597
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 164/356 (46%), Gaps = 48/356 (13%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVV-DDGSG 62
I LP+ + + + +G V+ VV ELV N++DAGAT+V V + + V DDG G
Sbjct: 13 IRELPDELISQIAAGEVIERPASVVRELVDNALDAGATQVTVRLSAGGVRLICVEDDGCG 72
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITK------ 116
I+R+ L + +RHATSK+ LAD++ +GT GFRGEALA+I+ V+ L ++++
Sbjct: 73 IAREELPVALKRHATSKIASLADLES---VGTMGFRGEALAAIASVAELSLLSRTAEAAS 129
Query: 117 AH---GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
AH GR R V +G +GTTV ++LF++ P RRK++++ +
Sbjct: 130 AHLLDGRSGELRPVARG--------------IGTTVEVKELFFSTPARRKFLKTDATEFA 175
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
H V + V R AL P V F E +L + G + V
Sbjct: 176 HCV-EAVRRHALARPDVGFAIWH---EGKLAEQWRPAGQEQRWADVLGRDFIEHSVPVAW 231
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
G + ++G P + S Q+ Y+N RYV K+L H A S A
Sbjct: 232 RAGPVRLAGRAGIPDAARSRADQQFAYVNGRYVRD----KVLQHAARS--------AYED 279
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
L G+R P Y+L L D+ P K V F+D V + A+ A
Sbjct: 280 VLHGQRQ-----PVYVLQLEISPERVDVNVHPTKIEVRFRDGREVHQAVRHALEQA 330
Score = 45.4 bits (106), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 17/189 (8%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
+ L Q+ +I L ++D HAA ERI E L+ ++ +G+ +A Q L++P
Sbjct: 409 RALAQLHGIYILAQNRQGLVIVDMHAAHERIVYERLKAQL---DGQQIA----SQPLLIP 461
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1286
+E +HT G L + + + AVP +
Sbjct: 462 AT---FAATPSEIATAEACTAALHTLG-------LEITPFSARTLAVRAVPTSLAQGDAA 511
Query: 1287 VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1346
L +LA D S+ + +L + AC GA+ L E ++ +++ T
Sbjct: 512 DLARSVLAELAQHDASTVVQRARNELLATMACHGAVRANRQLTLEEMNALLRQMEATERS 571
Query: 1347 FQCAHGRPT 1355
QC HGRPT
Sbjct: 572 DQCNHGRPT 580
>gi|261367033|ref|ZP_05979916.1| DNA mismatch repair protein MutL [Subdoligranulum variabile DSM
15176]
gi|282571151|gb|EFB76686.1| DNA mismatch repair domain protein [Subdoligranulum variabile DSM
15176]
Length = 687
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 174/353 (49%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + +G V+ V +EL+ N++DAGAT++ + G+ +++V
Sbjct: 1 MAEIRVLDKHTAELIAAGEVVERPASVAKELLENAIDAGATQITLSATRGGIAQ--LQIV 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+GSGI + + RHATSK+ A +D I T GFRGEALASI+ V+ +E++T+
Sbjct: 59 DNGSGIEAEYIDKAFIRHATSKI---ASAEDLNHIHTLGFRGEALASIASVAKVEVLTRT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
+ Y + + G + + VGTT+ +LFYN P R K+++ + + V
Sbjct: 116 EQ--DEYACCYRIAGGEPQGTEPGARPVGTTITVNELFYNTPARMKFLKKDASEGTY-VA 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ VL AL HP++SF+FI E + + + T + + + G E L V+ +G
Sbjct: 173 ETVLHAALSHPEISFRFIR-EGKQQFM-TPGDGELRSAVYAVMGREFARDLLPVDGGNGV 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
I+G I+ P + + Q+ ++N RYV K +AA +++K ++G
Sbjct: 231 YRITGLITPPRACRASRGTQHFFVNGRYV------KNRTMMAA---LENAYKGT--MMQG 279
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
K P +L L P L D+ P KT + F V + RA+R+A
Sbjct: 280 K------FPGAVLMLEMPADLVDVNVHPAKTEIRFARESDVFDAVYRAVRTAL 326
Score = 48.1 bits (113), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 47/229 (20%)
Query: 1157 SINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAY 1216
++ ++ +++ +V K +I G L +ID+HAA ERI E+L K
Sbjct: 492 TMTPPSVQPLRLVGEVFKTYIITEREGELCLIDKHAAHERILFEKL--------AKDYGN 543
Query: 1217 LDAEQELVLPEIGYQ------LLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV 1270
+ A+ LV ++ LLQN +E + D G + G +
Sbjct: 544 VPAQMLLVPVQVNLTAAEKQALLQN-SEMLNDAGL--EVEDFGG--------------ST 586
Query: 1271 ITLLAVPCIFGVNLSDVDLLEFLQQLAD--TDGSSTTPPSVLR-----VLNSKACRGAIM 1323
+ + AVP V + DV+ + + +LA DGS LR VL+S ACR AI
Sbjct: 587 VMVRAVPA--DVQVDDVE--DMVVELASRFVDGSR----DALREKTEWVLHSIACRAAIK 638
Query: 1324 FGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1372
GD +E ++ + + S+ C HGRP + + E L KQ +L
Sbjct: 639 AGDRTSDAEMLVLAQNILDGSIPPFCPHGRPCVLKITRKE-LEKQFGRL 686
>gi|322831154|ref|YP_004211181.1| DNA mismatch repair protein MutL [Rahnella sp. Y9602]
gi|321166355|gb|ADW72054.1| DNA mismatch repair protein MutL [Rahnella sp. Y9602]
Length = 639
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 186/383 (48%), Gaps = 44/383 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IKVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARHATSKITCL---DDLEAILSLGFRGEALASISSVSRLILTSRTAEQNE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I G+TV DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTIKPAAHPQGSTVEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSS-------SSPLALLISSFGIEDFSFLDEVNAND 235
IAL VS +++ +L+ + S LA + S +E EV +
Sbjct: 178 IALARFDVS---VNLSHNGKLIRQYRAVKDRSQFSRRLASICSPAFVEHAL---EVEWSH 231
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
G L I G+++ P S S+ QY Y+N+R + +L+NH A D K +
Sbjct: 232 GDLAIHGWVADPAGSRSLTDMQYCYVNNRMMKD----RLINH-AIRQAYQDQLKDDQQ-- 284
Query: 296 KGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
PAY+L L PH + D+ P K V F V FI +A+ S +
Sbjct: 285 ----------PAYVLYLDVDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQAVMSVLQQAG 333
Query: 355 AHDSFDVDMLEDAELPLESSRFQ 377
A +L++ +L ++ R+Q
Sbjct: 334 A------PVLDEPQLQEDTPRWQ 350
>gi|336477854|ref|YP_004616995.1| DNA mismatch repair protein MutL [Methanosalsum zhilinae DSM 4017]
gi|335931235|gb|AEH61776.1| DNA mismatch repair protein MutL [Methanosalsum zhilinae DSM 4017]
Length = 588
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 168/356 (47%), Gaps = 38/356 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I+ L EA N + +G V+ VV+EL+ N++DAG++++ V V G + V D+G G
Sbjct: 8 IHILDEATVNKIAAGEVIERPASVVKELIDNAIDAGSSQISVEVEGAGAGKIMVSDNGCG 67
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L +HATSK+ ++DD + T GFRGEAL+SI+ V+ +E+IT+ +
Sbjct: 68 MSEKDASLAFMKHATSKI---KEIDDLNNLSTLGFRGEALSSIAAVAKVEMITRQKNSVS 124
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSR----DLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + V+ + DE VG V SR DLFYN P RRKY++S ++ H +
Sbjct: 125 GTKLVVTNGEI------DEVSQVGAAVGSRICVKDLFYNTPARRKYLKSRRTEISHII-D 177
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
V + AL +P +SF F+ E + +L + S + +I FG + L + A +
Sbjct: 178 VVTKQALANPGISF-FLKNEGK-TILKAPKAKSGMDTIIHLFGGDIAKSLIPIEAKSNGM 235
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SGYIS P + Q+++IN R C S +N G
Sbjct: 236 KLSGYISRPELTKGNNDHQFIFINGR-------------------CVSSASISNAIRLGY 276
Query: 299 RSK--SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
+K P + L D P K+ V + V+ F+ A+ S +
Sbjct: 277 YTKIPKGRYPVAFIKLDADPKNIDFNVHPTKSKVRLSNENEVIDFVSMAVESTLSR 332
>gi|429204953|ref|ZP_19196234.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
gi|428146815|gb|EKW99050.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
Length = 655
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 169/349 (48%), Gaps = 31/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I+ L + + + +G V+ VV+ELV N++DA AT + + V ++V+D+
Sbjct: 1 MGKIHELAPNLADQIAAGEVVERPASVVKELVENAIDAHATTIDIVVEEAGLKSIQVMDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI D + L +RHATSK ++ +D + T GFRGEAL SI+ ++ +++ T
Sbjct: 61 GDGIPADEVKLAFKRHATSK---ISAREDLFKVQTLGFRGEALPSIASIADVQLTTATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+P G +KG L G+ R GTT+ +LFYN P R KY+ S + L +V
Sbjct: 118 QP-GTAIHLKGGTVLEFGVSASRP--GTTITVTELFYNTPARLKYLGSLATE-LAAVSDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP+++F + + +LL T + + ++ + +G++ + + D +
Sbjct: 174 VNRLALGHPEIAFSLTN--NGHQLLQTAGNGNLQQVIGAIYGVQSARQMLAITGEDHDFK 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + + + + + IN RY+ +++ +KG
Sbjct: 232 VTGFVSLPKLTRAARKYISLLINGRYI-------------------KNFQLTKALIKGYG 272
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
SK P +LN+ L D+ P K V E + IE I
Sbjct: 273 SKLMIGRYPIAVLNIELNPLLVDVNVHPTKQEVRISKEEQLTHLIETTI 321
>gi|319900075|ref|YP_004159803.1| DNA mismatch repair protein MutL [Bacteroides helcogenes P 36-108]
gi|319415106|gb|ADV42217.1| DNA mismatch repair protein MutL [Bacteroides helcogenes P 36-108]
Length = 644
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 186/383 (48%), Gaps = 46/383 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A ++ V V ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQEIHVLVTDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ AD+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIHEAADL---FALRTMGFRGEALASIAAVAEVELKTRPASEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R ++ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRLMIAGSKV------ESQEAVSCPKGSNFSVKNLFFNVPARRKFLKANSTE-LSNILN 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP+V+F + S D L ++S FG + L V + +
Sbjct: 175 EFERIALVHPEVAFY---LYSNDTELFNLPVMPLRQRIMSVFGKKLNQQLLAVEVDTTMV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SGY++ P + A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGYVAKPETARKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + A++ +
Sbjct: 274 ----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKETLGRF 329
Query: 354 IAHDSFDVDMLEDAELP-LESSR 375
A + D D + ++P E +R
Sbjct: 330 NAVPTIDFDTEDMPDIPAFEQAR 352
>gi|344213218|ref|YP_004797538.1| DNA mismatch repair protein MutL [Haloarcula hispanica ATCC 33960]
gi|343784573|gb|AEM58550.1| DNA mismatch repair protein MutL [Haloarcula hispanica ATCC 33960]
Length = 716
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 164/372 (44%), Gaps = 46/372 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + + +G V+ VV+ELV N++DA AT+V V V ++V DD
Sbjct: 1 MTDIQRLDDRTVERIAAGEVVERPASVVKELVENAIDADATRVEVVVEAGGTDGIRVTDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R+ + E+H TSK+ +AD++ G+GT GFRGEAL +I VS L I T+ G
Sbjct: 61 GVGMDREAVETAVEKHTTSKIRDIADLE--GGVGTLGFRGEALHAIGAVSRLTIRTRPRG 118
Query: 120 RPNGYRKVMKGSKCLYL---GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G V++G + G + GTT+ DLFYN P RRKY++ + H V
Sbjct: 119 GDVGTELVLEGGDVTSVSPAGCPE-----GTTMAVEDLFYNVPARRKYLKQESTEFAH-V 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFL------DE 230
V AL +P V+ + E T ++S +G E + E
Sbjct: 173 NTVVASYALANPDVAVSL--THGDRETFSTTGQGDLRETVMSVYGREVAESMISVGAGSE 230
Query: 231 VNAN--------DGALE-ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAAS 281
NA+ DG L+ + G +S P + + + + Y+N RYV G + + +
Sbjct: 231 ANADGDESDSFPDGPLDGVHGLVSHPETNRAGREYLSTYVNGRYVRAGTVRDAVVDAYGT 290
Query: 282 FDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF 341
D + P +L L P D+ P K V F D E V
Sbjct: 291 QIAPDRY-----------------PFAVLFLDVPAGDVDVNVHPRKMEVRFADDEGVREQ 333
Query: 342 IERAIRSAWMKK 353
+ A+ A +++
Sbjct: 334 VRTAVEDALLRE 345
>gi|398814313|ref|ZP_10572994.1| DNA mismatch repair protein MutL [Brevibacillus sp. BC25]
gi|398036582|gb|EJL29791.1| DNA mismatch repair protein MutL [Brevibacillus sp. BC25]
Length = 676
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 168/351 (47%), Gaps = 32/351 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MGTI L E + N + +G V+ VV+ELV N++DA AT + ++V +++VD+
Sbjct: 1 MGTIQVLDEHLANMIAAGEVVERPASVVKELVENAIDASATTIEIHVEEGGLEMIRIVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R+ L ERHATSK+ + D+ I T GFRGEAL SI+ VS +E+ +
Sbjct: 61 GKGMDREDCQLAFERHATSKISNARDL---FRIRTLGFRGEALPSIAAVSRMELTSSTSS 117
Query: 120 RPNGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G +++G + LG I D+ GT V R LF+N P R KYM+S +V H +
Sbjct: 118 SEVGTHLLLEGGQ---LGTISDKAAVKGTEVCVRSLFFNTPARLKYMKSIATEVGH-ISD 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
V R+AL HP +SF + LL T L ++ + +G++ L +
Sbjct: 174 YVNRLALTHPAISFLLT--HNSKTLLQTSGDGKLLHVMAAIYGVQVAKLLLPIAGETLDY 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ SG++S + + +++ +N RYV S+ NN ++G
Sbjct: 232 KWSGFLSKTEVTRANRSYLSTLVNGRYV-------------------RSYSINNAIMRGY 272
Query: 299 RS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ P L + SL D+ P K F + + + IE++++
Sbjct: 273 HTLLPIGRYPIVALQIEMDPSLVDVNVHPAKLEARFSKEDELCSAIEQSVK 323
>gi|358448119|ref|ZP_09158624.1| DNA mismatch repair protein [Marinobacter manganoxydans MnI7-9]
gi|357227547|gb|EHJ06007.1| DNA mismatch repair protein [Marinobacter manganoxydans MnI7-9]
Length = 636
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 168/363 (46%), Gaps = 28/363 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ VV+ELV N++DAGA +V V V ++V DD
Sbjct: 1 MPPIRLLSPRLANQIAAGEVVERPASVVKELVENALDAGANRVDVEVEQGGVKLIRVRDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI D L L RHATSK +A +DD + + GFRGEALASIS VS L + ++
Sbjct: 61 GSGIEEDDLPLALSRHATSK---IASLDDLEAVASLGFRGEALASISSVSRLTLTSRTES 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ R ++G + + I VGTTV RDLF+N P RRK++++ + H V++C
Sbjct: 118 QEAASRVEVEGRE-MDARISPAAHPVGTTVEVRDLFFNTPARRKFLRTEKTEFNH-VEEC 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNANDG 236
V R AL F + + L S+ I S + F+D ++A
Sbjct: 176 VRRQALSRFDAGFTLRHNQRVVQSLRPAESALDRERRIGSLCGQ--QFIDNAVVIDAEAT 233
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
L + G+++ P S S QY ++N R + +L+ H +A L
Sbjct: 234 GLRLWGWVALPTFSRSQADLQYFFVNGRVIRD----RLVAHAVR--------QAYRDVLY 281
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
R PA++L L + D+ P K V F+D V FI R + A
Sbjct: 282 NNRH-----PAFVLYLEVDPATVDVNVHPTKHEVRFRDGRLVHDFIFRTLHKALADVRPD 336
Query: 357 DSF 359
D F
Sbjct: 337 DHF 339
>gi|387926948|ref|ZP_10129627.1| DNA mismatch repair protein [Bacillus methanolicus PB1]
gi|387589092|gb|EIJ81412.1| DNA mismatch repair protein [Bacillus methanolicus PB1]
Length = 623
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 171/354 (48%), Gaps = 27/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I +L + + N + +G V+ VV+ELV N++DAG+T + V V ++V+D+
Sbjct: 1 MGKIIQLDDLLSNKIAAGEVVERPASVVKELVENAIDAGSTIIEVEVEEAGMAKIRVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L +RHATSK + D +D I T GFRGEAL SI+ VS LE+ T + G
Sbjct: 61 GEGIEEEDVPLAFQRHATSK---IKDENDLFRIRTLGFRGEALPSIASVSRLELRT-STG 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + V+KG + RK GT + DLF+N P R KY+++ + L ++
Sbjct: 117 NDAGTKIVLKGGNVQSIEKSPSRK--GTDITVTDLFFNTPARLKYLKTIHTE-LGNITDV 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL +P +SF+ + + +LL T + +L + +GI + ++ +
Sbjct: 174 MNRLALGNPNISFRLV--HNGRKLLHTAGNGDMRQVLAAIYGINIVKKMIPISFESLDFQ 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++GYIS P + + + + IN RY+ P+ K + + + L R
Sbjct: 232 VTGYISLPEVTRASRNYITTLINGRYIKNYPLVKAIQ------------EGYHTLLPISR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P LLN++ L D P K V + + I+ A+ K
Sbjct: 280 -----YPIVLLNIQMDPMLVDANVHPAKMEVRLSKEHELNELVANGIKQAFKTK 328
>gi|257386447|ref|YP_003176220.1| DNA mismatch repair protein MutL [Halomicrobium mukohataei DSM
12286]
gi|257168754|gb|ACV46513.1| DNA mismatch repair protein MutL [Halomicrobium mukohataei DSM
12286]
Length = 709
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 167/358 (46%), Gaps = 34/358 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSG 62
I RL A + +G V+ VV+ELV N++DA A +V V V +KV DDG G
Sbjct: 9 IRRLDSATVERIAAGEVVERPASVVKELVENALDADADRVSVAVEQGGIEGIKVTDDGIG 68
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP- 121
+SR+ + E H TSK+ + D++ G+GT GFRGEAL +I VS I T+ GR
Sbjct: 69 MSREAVERAVEEHTTSKISSIEDLE--RGVGTLGFRGEALHAIGAVSRTTITTRPRGREH 126
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
G V++G ++ GTT+ DLFYN P RRKY++ + + H V V
Sbjct: 127 QGTELVVEGGDV--TAVEPAGCPAGTTIEVDDLFYNVPARRKYLKQTSTEFAH-VNTVVT 183
Query: 182 RIALVHPKVSFKFIDMESED--ELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN---DG 236
AL +P V+ S D E T A ++S +G + + EV+ DG
Sbjct: 184 SYALANPDVAVTL----SHDGRETFATTGQGDLEATVLSVYGRDVAQSMIEVDDGDLPDG 239
Query: 237 ALE-ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
LE ++G +S P + + + + Y+N RYV + + + D D+ A + +
Sbjct: 240 PLESVTGLVSHPETNRASRDYLSTYVNGRYVRADAVREAI------VDAYDTQLAPDRY- 292
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +L + D+ P K V F D E V +E A++SA + +
Sbjct: 293 ----------PFAVLFCAVDPATVDVNVHPRKMEVRFADDEGVRRQVEHAVQSALLSE 340
>gi|433445605|ref|ZP_20409955.1| DNA mismatch repair protein MutL [Anoxybacillus flavithermus
TNO-09.006]
gi|432001019|gb|ELK21906.1| DNA mismatch repair protein MutL [Anoxybacillus flavithermus
TNO-09.006]
Length = 608
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 169/354 (47%), Gaps = 27/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I +L EA+ N + +G V+ VV+ELV N++DA +T + V + ++VVD+
Sbjct: 1 MGKIRKLDEALANKIAAGEVVERPASVVKELVENAIDAHSTIIEVELEEAGLAKIRVVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G + L ERHATSK+ AD+ I T GFRGEAL SI+ VS LE+ T G
Sbjct: 61 GDGFEEEDCFLAFERHATSKIKDEADL---FRIRTLGFRGEALPSIASVSHLELKTST-G 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G V+KG + + G RK GT V LF+N P R KYM++ ++ H V
Sbjct: 117 EGPGTWLVLKGGELVQHGRTSSRK--GTDVTVSHLFFNTPARLKYMKTIHTELGHVV-DV 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL HP +SF+ + +L T + +L + +G++ + ++A
Sbjct: 174 INRLALAHPHISFRL--THNGKQLFYTNGNGDVRQVLAAIYGLDVAKKMIAIHAETLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RY+ ++K + + + L R
Sbjct: 232 IDGYVALPEVTRASRNYMTTIVNGRYIKNYSLYKAIE------------EGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P LN+ L D+ P K V F + +++ IR ++ KK
Sbjct: 280 H-----PITFLNVMMDPLLIDVNVHPAKLEVRFSKEAELNELVQQTIRQSFQKK 328
>gi|238784776|ref|ZP_04628778.1| DNA mismatch repair protein mutL [Yersinia bercovieri ATCC 43970]
gi|238714289|gb|EEQ06299.1| DNA mismatch repair protein mutL [Yersinia bercovieri ATCC 43970]
Length = 633
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 189/380 (49%), Gaps = 36/380 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGVKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I+++ L L RHATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 INKEDLALALARHATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQNE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
IAL V+ I++ +L+ S L S G+ V+ G L
Sbjct: 178 IALARFDVA---INLSHNGKLMRQYRAATDPSHHERRLASICGLAFLQHALAVSWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S ++ QY Y+N+R + +L+NH +A LK
Sbjct: 235 TIRGWVADPAASRTLGEMQYCYVNNRMMRD----RLINHAIR--------QAYQDLLKDD 282
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 283 QQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQTATP 335
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+V+ +D E +E+ R+Q
Sbjct: 336 ILNVN--DDGE-EIEAPRWQ 352
>gi|219851577|ref|YP_002466009.1| DNA mismatch repair protein [Methanosphaerula palustris E1-9c]
gi|219545836|gb|ACL16286.1| DNA mismatch repair protein MutL [Methanosphaerula palustris E1-9c]
Length = 603
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 171/355 (48%), Gaps = 38/355 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN---CYVKVVDDG 60
I +L +A N + +G V+ V +EL+ N++DAGA ++ V N +++VD+G
Sbjct: 6 IRQLDQATINQIAAGEVIERPASVAKELIENAIDAGADQIRCEVTTENGEITRIRIVDNG 65
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
G+SR+ + H TSKL L DD + I T GFRGEALASI VS + ++T+
Sbjct: 66 RGMSREDAAIACLPHTTSKLRTL---DDLSTIHTMGFRGEALASIGAVSAMMLVTRQKES 122
Query: 121 PNGYRKVMKGSKCLYLGIDDERKD----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G R ++G G DE + +GTTV DLFYN P R+K+ Q S K L +
Sbjct: 123 TSGTRVSIRG------GAIDEVAEAGSALGTTVTVDDLFYNTPARKKF-QKSLKTELGHL 175
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V RIAL +P + F+ + + + T SS+ ++ +G E L V+A+DG
Sbjct: 176 YGIVERIALANPGIGFRL--LLNRRGRITTQRSSNKRDTIVGLYGPELARGLIPVSASDG 233
Query: 237 ALEISGYISSPYDSISVKAFQ-YVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
++I G+IS P S ++ +Q ++ IN R + LLN + +
Sbjct: 234 PVQIEGFISPPAIS-RLEPYQVHLSINRRDIYN---RALLNAIREGY------------- 276
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G P L+L +L D+ P K V + V A + IR+A
Sbjct: 277 -GTLLPKDRYPVAFLDLTIDTTLVDVNVHPAKRQVRLDQEQTVTAAVTAMIRAAL 330
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 89/205 (43%), Gaps = 36/205 (17%)
Query: 1161 SCLEDAKVLQQVDKKF-IPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDA 1219
S L + +VL QV + I TL +IDQHAA ERI +++R ++V
Sbjct: 413 SNLPEMRVLGQVANTYLIAETPDQTLCLIDQHAAHERILYDQIRRN------RTVQT--- 463
Query: 1220 EQELVLPEIGYQLLQNFAEQIKDWGWIC-----NIHTQGSRSFNKNLNLLQRQITVITLL 1274
QEL+ P + LQ AE I++ I I G SF +
Sbjct: 464 -QELITPVLLTVTLQE-AEAIREATPIFEREGFRIEEFGRDSF--------------AVS 507
Query: 1275 AVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKACRGAIMFGDSLLPSE 1332
AVP IFG + D + + + +A G + R + + ACRGA+ G +L +
Sbjct: 508 AVPVIFG-RIEDPE--QVREIIAGVIGEEPGDQTATRNAITSRVACRGAVKAGAALTNEQ 564
Query: 1333 CALIVEELKQTSLCFQCAHGRPTTV 1357
++ +L T F C HGRPT V
Sbjct: 565 GEQLLAQLAATEDPFTCPHGRPTVV 589
>gi|166031821|ref|ZP_02234650.1| hypothetical protein DORFOR_01522 [Dorea formicigenerans ATCC
27755]
gi|166028274|gb|EDR47031.1| DNA mismatch repair domain protein [Dorea formicigenerans ATCC
27755]
Length = 698
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 149/278 (53%), Gaps = 13/278 (4%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ VV+EL N++DAGAT V V + G+ ++++
Sbjct: 1 MSKIQVLDQITIDKIAAGEVIERPASVVKELAENAIDAGATAVTVEIKEGGIT--FMRIA 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI ++ + RH+TSK+ +D I + GFRGEAL+SI+ VS +E++TK
Sbjct: 59 DNGIGIDKEDVRAAFLRHSTSKI---RSAEDLAHISSLGFRGEALSSIAAVSQVELLTKT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G R + G K L +D GTT + R LFYN P RRK+++++ + H V
Sbjct: 116 KEADFGVRYKIAGGKEESL--EDAGAPDGTTFLIRQLFYNTPARRKFLKTAMTEASH-VG 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
V R+AL HP+VSF+FI+ + L T + + ++ +G E S L EV+
Sbjct: 173 DLVTRLALSHPEVSFRFIN--NGQVKLHTSGNGNLKDVIYHIYGREIASNLIEVDFERKG 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLL 275
+ I+GY+ P S + F+ +++ RY+ I K +
Sbjct: 231 IHITGYLGKPLISRGNRNFENYFVDGRYIKSSIISKAI 268
>gi|212218528|ref|YP_002305315.1| DNA mismatch repair protein [Coxiella burnetii CbuK_Q154]
gi|212012790|gb|ACJ20170.1| DNA mismatch repair protein [Coxiella burnetii CbuK_Q154]
Length = 575
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 173/369 (46%), Gaps = 44/369 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I RL + N + +G V+ VV+EL+ NS+DA A+ + V + +++ DD
Sbjct: 1 MMYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + LVL ERHATSK +A +DD I T GFRGEAL+SIS VS L + ++
Sbjct: 61 GDGIHPEDLVLALERHATSK---IAKIDDLQDITTLGFRGEALSSISAVSRLTLTSRQKN 117
Query: 120 RPNGYR------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
GYR K+M + GTT+ +DLFYN P RRK+++ SP
Sbjct: 118 AEMGYRISNISHKIMTPVPAAH--------PQGTTIDVQDLFYNTPARRKFLR-SPATEF 168
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELL---CTCSSSSPLALLISSFGIEDFSFLDE 230
+++ + R+AL H + +F+ +E E++ + S + S G
Sbjct: 169 QHIRRIIERLALSH--FTTEFLLHHNEKEIIHFKPATTISGQENRIKSILGDVFMQSALA 226
Query: 231 VNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 290
+ + L + GYI+ + S QY+Y+N R+V I + L A D
Sbjct: 227 IEFSQSGLTLKGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQ--AYHDV------ 278
Query: 291 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G+ PAY+L L + D+ P K V F+D + V F+ A+++A
Sbjct: 279 ---LFHGRH------PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTAL 329
Query: 351 MKK---IAH 356
+ IAH
Sbjct: 330 AQAKPGIAH 338
>gi|86133303|ref|ZP_01051885.1| DNA mismatch repair protein MutL [Polaribacter sp. MED152]
gi|85820166|gb|EAQ41313.1| DNA mismatch repair protein MutL [Polaribacter sp. MED152]
Length = 604
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 169/345 (48%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGAT + + ++V+DDG G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATSIKLLLKDAGKTLIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ D+ + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSATDARMCFERHATSKIQKAEDL---FNLCTKGFRGEALASIAAIAHVELKTKQENEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++GS + K G ++ ++LFYN P RR +++S + H + + R
Sbjct: 122 GTCLKIEGSTVISQDFISTGK--GASIAVKNLFYNIPARRNFLKSDTVETRHVIDE-FQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP ++F +E + SS+ +++ FG + L +N L+I G
Sbjct: 179 VALAHPSIAFLLHHNNNE---VYHLKSSNLRQRIVAVFGAKMNEKLVPINEQTDILDIKG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+++ P + + Q+ ++N R++ LNH + A +G L +
Sbjct: 236 FVAKPEFAKRKRGEQFFFVNDRFIKSS----YLNHAVVN--------AFDGLL-----EQ 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ P+Y L L+ P + D+ P KT + F + + + A + ++
Sbjct: 279 GSHPSYFLYLKVPANTIDINIHPTKTEIKFDNEKALYAMLRATVK 323
>gi|422867025|ref|ZP_16913628.1| DNA mismatch repair protein [Enterococcus faecalis TX1467]
gi|329577814|gb|EGG59237.1| DNA mismatch repair protein [Enterococcus faecalis TX1467]
Length = 710
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 SDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|375308897|ref|ZP_09774179.1| DNA mismatch repair protein mutL [Paenibacillus sp. Aloe-11]
gi|375079109|gb|EHS57335.1| DNA mismatch repair protein mutL [Paenibacillus sp. Aloe-11]
Length = 733
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 170/355 (47%), Gaps = 26/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I L E + N + +G V+ + VV+ELV N++DAG T+V V V ++V D+
Sbjct: 1 MSKIRVLDEHIANQIAAGEVVERPSSVVKELVENAIDAGGTRVDVSVEEGGLQSIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI + + RHATSK+GH D+ T + GFRGEAL SI+ VS +E++T A
Sbjct: 61 GSGIEPEDVETAFYRHATSKIGHGRDLFQIT---SLGFRGEALPSIAAVSKVELLTAAGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ V++G K + +D GT R+LFYN P R KYM++ ++ H +
Sbjct: 118 DGRARKLVIEGGKLMLH--EDAAARQGTDFTVRELFYNTPARLKYMKTIQTELGH-ISDV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL HP+V+F + + LL T + L ++ + +G + +
Sbjct: 175 LYRMALSHPEVAFTL--RHNGNTLLQTLGNGDLLQVIAAIYGTSAAKSMLPLEGESLDYR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + S + +N R+V +++ L KA + L R
Sbjct: 233 ISGFVSRPEWTRSNRNAISTVVNGRFVRSYGLNQAL------------LKAYHTLLPINR 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
P ++ L SL D+ P K V F + +E +I++ +++
Sbjct: 281 -----FPLAVIQLEMHPSLVDVNVHPAKLEVRFSKETELFQLVEDSIKAVLGQQV 330
>gi|238019354|ref|ZP_04599780.1| hypothetical protein VEIDISOL_01218 [Veillonella dispar ATCC 17748]
gi|237864053|gb|EEP65343.1| hypothetical protein VEIDISOL_01218 [Veillonella dispar ATCC 17748]
Length = 673
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 171/355 (48%), Gaps = 34/355 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M TI+ L E N + +G V+ V++EL+ NS+DA AT + V +G Y+++ D+
Sbjct: 1 MATIHVLDETTINKIAAGEVVERPASVIKELIENSIDASATNIEVEIGDGGVAYMRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + L RHATSK+ H+ D+ D I + GFRGEALASI+ VS + T+
Sbjct: 61 GIGMTEEDARLAILRHATSKIQHVEDLFD---IASLGFRGEALASIASVSHFSMTTRKAD 117
Query: 120 RPNGYRKVMKG---SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G R + G + C+ G GTT+ RDLFYN P RRK++++ + +
Sbjct: 118 ADLGTRITVDGGTFTDCIPYG-----AAPGTTIEIRDLFYNTPARRKFLKTE-RTESSKI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAND 235
+ V ++AL +P +SFK I +D + + + +++ +G + + V
Sbjct: 172 QDIVGKLALSNPHISFKLI---IDDRVAIITPGNGNIGDTVAALYGYKTKDDIFTVAYES 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
++ I G +S P S + +Q + +N+R + I K ++ + + NG
Sbjct: 229 DSIYIDGVVSKPTLLKSTRIWQTIIVNNRVISDKTIMKAID------NAYHALLPKNGH- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
P +LN+ P + D+ P K+ V F D + + + I +A
Sbjct: 282 ----------PLVVLNITVPAEMVDINVHPRKSEVKFSDDKIIFKAVYHGILNAL 326
Score = 47.8 bits (112), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 80/192 (41%), Gaps = 26/192 (13%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI 1228
+ QV +I G L +IDQHAA ER+R ++L S E + + Q +
Sbjct: 491 MGQVASCYILAKKGDDLYIIDQHAAHERVRYDKL---CKSSEAIPMQSILVPQYSEATDD 547
Query: 1229 GYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVD 1288
L++ E + D G+ +I G T I L+ P V+L +
Sbjct: 548 EMNLVEEEREILLDLGF--DIELGGP--------------TKIKLVGAP----VDLVESK 587
Query: 1289 LLEFLQQLADTDGSSTTPPSV-LR--VLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
E LQ + P LR +L +CRGAI G +L + ++E+L T
Sbjct: 588 AFEILQYVFSYLHDHQQPTKAQLRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEK 647
Query: 1346 CFQCAHGRPTTV 1357
+ C HGRPT +
Sbjct: 648 PYVCPHGRPTII 659
>gi|161830565|ref|YP_001596643.1| DNA mismatch repair protein [Coxiella burnetii RSA 331]
gi|81839061|sp|Q83CM9.1|MUTL_COXBU RecName: Full=DNA mismatch repair protein MutL
gi|189030397|sp|A9NCK3.1|MUTL_COXBR RecName: Full=DNA mismatch repair protein MutL
gi|161762432|gb|ABX78074.1| DNA mismatch repair protein MutL [Coxiella burnetii RSA 331]
Length = 574
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 171/359 (47%), Gaps = 41/359 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I RL + N + +G V+ VV+EL+ NS+DA A+ + V + +++ DDG G
Sbjct: 3 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + LVL ERHATSK +A +DD I T GFRGEALASIS VS L + ++
Sbjct: 63 IHPEDLVLALERHATSK---IAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEM 119
Query: 123 GYR------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
GYR K+M + GTT+ +DLFYN P RRK+++ SP +
Sbjct: 120 GYRISNISHKIMTPVPAAH--------PQGTTIDVQDLFYNTPARRKFLR-SPATEFQHI 170
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA--- 233
++ + R+AL H + +F+ +E E++ S+++ I F+ A
Sbjct: 171 RRIIERLALSH--FTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIEF 228
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+ L + GYI+ + S QY+Y+N R+V + + L A D
Sbjct: 229 SQSGLTLKGYIAEAAYTRSQPDLQYIYVNGRFVRDKLVAQALRQ--AYHDV--------- 277
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
G+ PAY+L L + D+ P K V F+D + V F+ A+++A +
Sbjct: 278 LFHGRH------PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTALAQ 330
>gi|357404925|ref|YP_004916849.1| DNA mismatch repair protein MutL [Methylomicrobium alcaliphilum
20Z]
gi|351717590|emb|CCE23255.1| DNA mismatch repair protein MutL [Methylomicrobium alcaliphilum
20Z]
Length = 605
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 190/398 (47%), Gaps = 36/398 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSG 62
I+ LP + N + +G V+ + VV+ELV N DAGAT V + + +K+ DDG G
Sbjct: 3 IHSLPTQLVNQIAAGEVVERPSSVVKELVENCFDAGATSVAIEIEQGGMRRIKIRDDGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD + T GFRGEAL SIS V+ L +I++
Sbjct: 63 IDKDDLPLALSRHATSK---IATLDDLEHVSTMGFRGEALPSISSVARLTLISRTEAADC 119
Query: 123 GYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+R GS+ + D + D GTTV RDLFYN P RRK++++ + H ++
Sbjct: 120 AWRVDADGSEQNF----DPKPDPHPQGTTVDVRDLFYNTPARRKFLKTEKTEFGH-IETL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD---EVNANDG 236
+ R+AL + F ++ E+L ++ + GI F+D +++
Sbjct: 175 IKRMALSRFDIGFAL--THNQREVLNLKPVTTEVQREQRIAGICGSEFIDNSVKIDFEAS 232
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
L+++G++ P S S + Q+ Y+N R + KL++H +A L
Sbjct: 233 GLQLTGWVGLPTFSRSQQDMQFFYVNGRLIKD----KLVSHAVK--------QAYQDVLY 280
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-RS-AWMKKI 354
R P ++L L +L D+ P K V F++ V F+ RA+ RS A ++
Sbjct: 281 HGRH-----PVFVLYLNLDPALVDVNAHPAKLEVRFREGRLVHDFLYRALHRSLADLRPG 335
Query: 355 AHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKN 392
+ + V + E +P ++S + P +N
Sbjct: 336 SQEQRSVPIEEFVPMPPQTSEQPPVNPQVQFQAKPKQN 373
Score = 45.8 bits (107), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 23/182 (12%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP-EIGYQLLQ-NFAEQIKD 1242
+ ++D HAA ER+ E L+ + +G S Q L+LP +I + + AEQ +D
Sbjct: 435 IILVDTHAAHERVTYERLKQQFNNGSVPS-------QPLLLPIKIAVSAGEADLAEQHQD 487
Query: 1243 WGWICNIHTQGSRSFNK-NLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG 1301
+ FN L + I L +VP + S+ + + L + +
Sbjct: 488 F-------------FNALGFELNRSGPETIVLRSVPVLLAGGDSEALIRDVLADIIEHGL 534
Query: 1302 SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVN 1361
S+ VL + AC G++ L E ++ ++++T QC HGRPT V L
Sbjct: 535 STRIQEKANEVLATVACHGSVRARRRLSIDEMNALLRDMERTERIGQCNHGRPTWVELST 594
Query: 1362 LE 1363
E
Sbjct: 595 QE 596
>gi|334136568|ref|ZP_08510029.1| DNA mismatch repair protein, C-terminal domain protein
[Paenibacillus sp. HGF7]
gi|333605901|gb|EGL17254.1| DNA mismatch repair protein, C-terminal domain protein
[Paenibacillus sp. HGF7]
Length = 788
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 166/356 (46%), Gaps = 28/356 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV NS+DAG++++ V ++V D+
Sbjct: 1 MGKIRLLDEHIANQIAAGEVVERPASVVKELVENSIDAGSSRIDVVAEEGGLQLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI + L RHATSK+ D+ I T GFRGEAL SI+ VS E +T G
Sbjct: 61 GSGIESEDCELAFYRHATSKIQSGKDL---FSIRTLGFRGEALPSIAAVSKTEFVTSTDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + ++G + RK GT + ++LFYN P R KYM++ ++ H +
Sbjct: 118 SGLGRKLAVEGGDVVTQEETSARK--GTDISVKELFYNTPARLKYMKTIQTELGH-ISDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL HP+++F + + LL T L ++ +G + V +
Sbjct: 175 MYRLALAHPEIAFTL--KHNGNSLLQTLGGGDLLQVIAGVYGSAVGKQMIAVGGESLDYK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPI-HKLLNHLAASFDCSDSWKANNGFLKGK 298
ISGYIS P + + ++ + +N RYV + H ++N N F
Sbjct: 233 ISGYISRPELNRANRSAMSIMVNGRYVRSFAVQHAIMNGFHTLLPI-------NRF---- 281
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
P +L++ SL D+ P K V F ++ IE I+ A +++
Sbjct: 282 -------PVVVLHIEMDPSLVDVNVHPSKLEVRFSKEPELVKMIEDMIKEALGRQV 330
>gi|110597213|ref|ZP_01385501.1| DNA mismatch repair protein MutL [Chlorobium ferrooxidans DSM
13031]
gi|110341049|gb|EAT59517.1| DNA mismatch repair protein MutL [Chlorobium ferrooxidans DSM
13031]
Length = 626
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 179/354 (50%), Gaps = 35/354 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I RLP+++ N + +G V+ VV+EL+ NS+DAGA K+ + V +++VD+
Sbjct: 1 MARIARLPDSIANKISAGEVVQRPASVVKELLENSIDAGADKITLSVKDAGKELIRIVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G+G+ R+ +L ER ATSK+ + D+D + T GFRGEALASIS VS E+ T+
Sbjct: 61 GAGMLREDALLCVERFATSKIIGVEDLD---SLKTLGFRGEALASISSVSHFELKTRTAK 117
Query: 120 RPNGYR-KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R + G G+ E+ GTT+ R+LFYN P RRK+++S+ + H + +
Sbjct: 118 ETLGLRFRYEGGVLAEESGVQGEQ---GTTMSVRNLFYNVPARRKFLKSNATEFQH-IFE 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFS-FLDEVNANDGA 237
+ AL +P++ ++ M ++DE L + +A ++ F DFS L E++ +
Sbjct: 174 VIKSFALAYPEIEWR---MYNDDEELFHFRTPE-MAERLNFFYGSDFSDSLIELSEENDY 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
L I G++ P K QY +IN R + +++L S + + G L
Sbjct: 230 LSIRGFLGKPAMQKRKKLDQYFFINRRVIQ----NRML---------SQAVQQAYGELLV 276
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV----LAFIERAIR 347
+R P LL L S D+ P K V F D V I+RAI+
Sbjct: 277 ERQ----APFVLLFLEIDPSRIDVNVHPAKLEVRFDDERSVRNMFYPVIKRAIQ 326
>gi|357636280|ref|ZP_09134155.1| DNA mismatch repair protein [Streptococcus macacae NCTC 11558]
gi|357584734|gb|EHJ51937.1| DNA mismatch repair protein [Streptococcus macacae NCTC 11558]
Length = 648
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 184/397 (46%), Gaps = 45/397 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + V ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPASVVKELVENAIDAKSSQITIEVEESGLKTIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI ++ + + RHATSK+ + +D+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GQGIEKEEVAMSLRRHATSKIKNQSDL---FRIRTLGFRGEALPSIASVSKMTIKTAVAK 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ESHGTLLLSIGGK-----IEQEEPYSTPIGTKVTVEDLFFNTPARLKYMKSLQVELGHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R++L HP+++F I+ EL T + + +G+ + E+ +D
Sbjct: 173 -DTVNRMSLAHPEIAFTLIN--DGKELTKTSGNGDLRQAIAGIYGLNTAKKMIEITGSDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+++GY+S P + + + + + IN RY+ ++ N L
Sbjct: 230 DFDLTGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G +SK P ++ ++ L D+ P K V + ++ I AI K+
Sbjct: 271 GYKSKLMVGRFPIAVIAIQIDPYLADVNVHPTKQEVRISKEKELMQLISTAISEGLRKQ- 329
Query: 355 AHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLK 391
D++ DA L S +S Q +T + PLK
Sbjct: 330 -------DLIPDALENLAKSSTRSAQKATQT-TLPLK 358
>gi|409404613|ref|ZP_11253092.1| DNA mismatch repair protein [Herbaspirillum sp. GW103]
gi|386436132|gb|EIJ48955.1| DNA mismatch repair protein [Herbaspirillum sp. GW103]
Length = 642
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 173/359 (48%), Gaps = 41/359 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP+ + + + +G V+ + VV+EL+ N++DAG+T++ V + + + D+G G
Sbjct: 21 IQALPDQLISQIAAGEVIERPSAVVKELLENALDAGSTQITVRLEQGGVKRIAITDNGRG 80
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + L L RHATSK+ L D+++ + T GFRGEALASI+ V+ L + ++ P+
Sbjct: 81 IPPEQLPLALARHATSKIASLTDLEN---VSTLGFRGEALASIASVAQLTVTSRTADAPH 137
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
+ + GS+ + + GTT+ +DL++N P RRK+++S + H + V R
Sbjct: 138 AWE--ITGSQ--FGTVAPASGAQGTTIDVQDLYFNTPARRKFLKSEQTEYGHCA-EVVRR 192
Query: 183 IALVHPKVSF------KFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
IAL P VSF K +D + E + +L F LDE + G
Sbjct: 193 IALARPDVSFSLSHNGKTVDHWNVGEFAKRSAH-----ILGDEFANARLP-LDE---SAG 243
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
L + G++ P S + QY Y+N R+V KLL H + A L
Sbjct: 244 PLRLHGFVGLPTASKARADGQYFYVNGRFVRD----KLLTHAVRA--------AYQDVLH 291
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
G R PAY L+L +L D+ P K V F+D V F+ A+ A + A
Sbjct: 292 GDR-----YPAYALSLTLDPALVDVNVHPSKIEVRFRDSRAVHQFVFHAVSRALAQTSA 345
>gi|255974226|ref|ZP_05424812.1| DNA mismatch repair protein mutL [Enterococcus faecalis T2]
gi|307284812|ref|ZP_07564968.1| DNA mismatch repair protein [Enterococcus faecalis TX0860]
gi|255967098|gb|EET97720.1| DNA mismatch repair protein mutL [Enterococcus faecalis T2]
gi|306503071|gb|EFM72328.1| DNA mismatch repair protein [Enterococcus faecalis TX0860]
Length = 710
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|226312962|ref|YP_002772856.1| DNA mismatch repair protein MutL [Brevibacillus brevis NBRC 100599]
gi|226095910|dbj|BAH44352.1| DNA mismatch repair protein MutL [Brevibacillus brevis NBRC 100599]
Length = 690
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 168/351 (47%), Gaps = 32/351 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MGTI L E + N + +G V+ VV+ELV NS+DA AT + ++V +++VD+
Sbjct: 1 MGTIQVLDEQLANMIAAGEVVERPASVVKELVENSIDARATTIEIHVEEGGLEMIRIVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ R+ L ERHATSK+ + D+ I T GFRGEAL SI+ VS +E+ +
Sbjct: 61 GRGMDREDCQLAFERHATSKISNARDL---FRIRTLGFRGEALPSIAAVSRMELTSSTSS 117
Query: 120 RPNGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G +++G + LG I D+ GT V R LF+N P R KYM+S +V H +
Sbjct: 118 SEVGTHLLIEGGQ---LGTISDKAAVKGTEVCVRSLFFNTPARLKYMKSIATEVGH-ISD 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
V R+AL HP +SF + LL T L ++ + +G++ L +
Sbjct: 174 YVNRLALTHPSISFLL--THNGKTLLQTSGDGKLLHVMAAIYGVQVAKLLLPIAGETLDY 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ SG++S + + +++ +N RYV S+ NN ++G
Sbjct: 232 KWSGFLSKTEVTRANRSYLSTLVNGRYV-------------------RSYSINNAIMRGY 272
Query: 299 RS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ P L + SL D+ P K F + + + IE++++
Sbjct: 273 HTLLPIGRYPIVALQIEMDPSLVDVNVHPAKLEARFSKEDELCSAIEQSVK 323
>gi|402832234|ref|ZP_10880887.1| DNA mismatch repair protein, C-terminal domain protein
[Capnocytophaga sp. CM59]
gi|402278140|gb|EJU27205.1| DNA mismatch repair protein, C-terminal domain protein
[Capnocytophaga sp. CM59]
Length = 608
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 177/372 (47%), Gaps = 36/372 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ V+EL+ N++DAGAT++ +Y+ V+VVD+G G
Sbjct: 5 IRLLPDNVANQIAAGEVIQRPASAVKELLENAIDAGATQIKLYLKDAGRTLVQVVDNGIG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ DD + T GFRGEALASI+ ++ +E+IT G+
Sbjct: 65 MSPTDARLAFERHATSKI---RSADDLFTLHTKGFRGEALASIASIAQVELITCQEGQEV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G ++G+K I ++ V GT++ + LF+N P RR +++S ++ H + +
Sbjct: 122 GTSLKIEGNK-----ITEQTPMVASRGTSIAMKHLFFNVPARRNFLKSDTVEMRHILDEF 176
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
R+ L HP + F + E L + + L FG L V N L
Sbjct: 177 -HRVVLAHPDLQFSLFHNDVEQFALPATTLRKRIVQL---FGQRLNEQLIPVEENTELLR 232
Query: 240 ISGYISSPYDSISV-KAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+IS DS K+ Q+ +N R++ ++ L+H S A G LK
Sbjct: 233 IHGFISK--DSYKKNKSLQFFMVNQRFIK----NRYLHHAVVS--------AFEGLLKEG 278
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
P Y L+L D+ P KT + F + + + A + AI+ + + S
Sbjct: 279 EQ-----PEYFLHLEIDPKHIDINIHPTKTEIKFDNDQAIYALLRSAIKHSLGQFHVLPS 333
Query: 359 FDVDMLEDAELP 370
D + E E+P
Sbjct: 334 IDFSLDEQNEVP 345
>gi|227824421|ref|ZP_03989253.1| DNA mismatch repair protein mutL [Acidaminococcus sp. D21]
gi|352684319|ref|YP_004896304.1| DNA mismatch repair protein mutL [Acidaminococcus intestini
RyC-MR95]
gi|226904920|gb|EEH90838.1| DNA mismatch repair protein mutL [Acidaminococcus sp. D21]
gi|350278974|gb|AEQ22164.1| DNA mismatch repair protein mutL [Acidaminococcus intestini
RyC-MR95]
Length = 628
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 166/355 (46%), Gaps = 32/355 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGAT--KVFVYVGVCNCYVKVVDDGS 61
+ L + N + +G V+ VV+ELV N++DAGAT V +Y G Y++V D+GS
Sbjct: 5 VQLLDQNTSNQIAAGEVVEKPMSVVKELVENALDAGATHVDVTIYEGGTE-YIRVKDNGS 63
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+ + L RHATSK+ +D + T GFRGEAL SI+ VS ++T+ G
Sbjct: 64 GMDEENARLAVLRHATSKI---VKAEDLLTLKTLGFRGEALPSIASVSHFNLLTREEGAE 120
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ G + + +D DVGTTV +DLFYN P RRK++++ + + + +
Sbjct: 121 FATSITIDGGENM--SVDVMGGDVGTTVTVKDLFYNVPARRKFLRTVSTEGRY-INDILS 177
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++AL P V F ++ E+L T S L ++ + +G L V+ + +
Sbjct: 178 KMALSRPDVHFTL--QNNDKEVLNTPGSGDELDVIGALYGKNVVEALLPVDHEQDGIRVK 235
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G+IS P + +Q +++N RY+ + + ++H S +GF
Sbjct: 236 GFISRPTLLKGTRQWQTLFVNDRYIVSRMVSRAIDH------AYQSQIPKSGF------- 282
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
P +L L D+ P K+ + F D + V RA+ A + H
Sbjct: 283 ----PFAMLKLTVDTHAIDINVHPQKSEIKFGDEQAVY----RAVYHALTNALTH 329
>gi|395212595|ref|ZP_10399868.1| DNA mismatch repair protein [Pontibacter sp. BAB1700]
gi|394457112|gb|EJF11305.1| DNA mismatch repair protein [Pontibacter sp. BAB1700]
Length = 608
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 170/348 (48%), Gaps = 27/348 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP+ + N + +G V+ + VV+EL+ N++DA AT V + V V+VVD+G G
Sbjct: 5 IHLLPDYLANQIAAGEVVQRPSSVVKELLENAIDARATSVQLIVKEAGKQLVQVVDNGIG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK+ +D I T GFRGEA+ASI V+ +E+ TK HG
Sbjct: 65 MSETDARMCFERHATSKI---KSTEDLFRIRTMGFRGEAMASIGAVAQVELKTKPHGAET 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G R +++GS + GT++ ++LFYN P RR +++++ ++ H + + R
Sbjct: 122 GTRLLVEGSTVAAQ--EPAAIAAGTSIAVKNLFYNVPARRNFLKTNAVEMRHILDEF-QR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL +P+V+F E E + + + ++ FG + + + G
Sbjct: 179 VALAYPEVAFTLHHNEVE---IFSLPAGKLSQRIVGVFGNNHKEQMAGCEEETPFMSVRG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
YI P + + Q+ ++N+R++ G LNH + A G L
Sbjct: 236 YIGKPEFAKKTRGEQFFFVNNRFIKSG----YLNHAVMT--------AYEGLL-----PK 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
+ P Y+L + D+ P KT + F+D + V A + A++ +
Sbjct: 279 DSHPFYVLFIDIEPERIDINVHPTKTEIKFEDEKTVYAIVHAAVKKSL 326
>gi|319649470|ref|ZP_08003626.1| DNA mismatch repair protein [Bacillus sp. 2_A_57_CT2]
gi|317398632|gb|EFV79314.1| DNA mismatch repair protein [Bacillus sp. 2_A_57_CT2]
Length = 640
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I +L +A+ N + +G V+ VV+EL+ NS+DAG+T + + ++++D+
Sbjct: 1 MGKIIQLDDALSNKIAAGEVVERPASVVKELMENSIDAGSTIIEIEAEEAGLAKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI D ++ RHATSK + D +D I T GFRGEAL SI+ VS +E+ T
Sbjct: 61 GDGIEEDDVLNAFHRHATSK---IKDENDLFRIRTLGFRGEALPSIASVSRIEMKTSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G R V++G K + RK GT + DLF+N P R KYM++ + L ++
Sbjct: 118 --DGTRVVIEGGKVEVMEKAPGRK--GTDLTVTDLFFNTPARLKYMKTIHTE-LGNITDV 172
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP+V+ + I +E +LL T + +L + +G+ + + A+ +
Sbjct: 173 VNRLALAHPEVAIRLI--HNERKLLQTNGNGDVRQVLAAIYGLNIVKKMVRIEASSLDFK 230
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISGY + P + + + + IN R++ + K + + + L R
Sbjct: 231 ISGYAAMPEITRASRNYISTMINGRFIKNYSLAKAIQ------------EGYHTLLPIGR 278
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P LLN+ L D+ P K V + + A+++A+ K+
Sbjct: 279 -----YPIVLLNIEMDPLLVDVNVHPSKMEVRLSKEHELNELVSDALKAAFKKE 327
>gi|167745631|ref|ZP_02417758.1| hypothetical protein ANACAC_00323 [Anaerostipes caccae DSM 14662]
gi|167654943|gb|EDR99072.1| DNA mismatch repair domain protein [Anaerostipes caccae DSM 14662]
Length = 620
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 169/349 (48%), Gaps = 28/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I L + + + +G V+ VV+ELV N++DA AT V V + ++V D+
Sbjct: 1 MAEIQLLDQKTIDNIAAGEVIERPASVVKELVENAIDAKATAVTVEIRDGGMTLMRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI ++ + RHATSK+ ++D + + GFRGEAL+SIS V +E+ITK G
Sbjct: 61 GCGIPKEEVRTAFLRHATSKI---RTVEDLVSVSSLGFRGEALSSISAVGQVEVITKTAG 117
Query: 120 RPNGYR-KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
+G K+ G + G+D+ GTT + R+LFYN P RRK+++ SP V++
Sbjct: 118 AFSGVSYKIFGGEEQ---GLDEIGAPDGTTFLVRNLFYNTPARRKFLK-SPVTEAGYVEQ 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
++ +AL HP ++FKFI + + T + + ++ +G + L ++ +
Sbjct: 174 IMVHMALSHPDIAFKFI--HNSKNKMYTSGNGNVKDIIYHLYGRDVAGALLPISLKGPTV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ GY+ P+ S + ++ +IN RY+ I+K + +F + +
Sbjct: 232 SVDGYVGKPFISRGNRNYESYFINGRYIKSKIIYKAIEDGYKTFTMAHKY---------- 281
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P LN+ L D+ P K + F++ + + + I+
Sbjct: 282 -------PFVCLNIEVEPELLDVNVHPTKMEIRFRNEKELYELLASGIK 323
Score = 40.8 bits (94), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 28/204 (13%)
Query: 1165 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEEL----RHKVLSGEGKSVAYLDAE 1220
D KV+ Q+ K + + L ++DQHAA E++ E+L R K + +G Y+
Sbjct: 431 DRKVIGQLFKTYWLIEYEDQLFIMDQHAAHEKVNYEKLMKSFREKKIYSQGVEPPYV--- 487
Query: 1221 QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-I 1279
+ L ++L+ + ++ G+ I G F + VP +
Sbjct: 488 --VTLSMAEAKVLEETKDIFQELGF--TIEAFGGNEF--------------CIRQVPANL 529
Query: 1280 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1339
+G+ ++ +E L L DG P + + S AC+ + + E +++
Sbjct: 530 YGLKEKEL-FMELLDSLT-ADGVKKDPEMITDKIASMACKMSAKGNQRMSLPEVRNLLDL 587
Query: 1340 LKQTSLCFQCAHGRPTTVPLVNLE 1363
L + + C HGRPT + + E
Sbjct: 588 LMECENPYTCPHGRPTMIKMSKYE 611
>gi|410452948|ref|ZP_11306910.1| DNA mismatch repair protein [Bacillus bataviensis LMG 21833]
gi|409933693|gb|EKN70613.1| DNA mismatch repair protein [Bacillus bataviensis LMG 21833]
Length = 629
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 171/355 (48%), Gaps = 27/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I +L +A+ N + +G V+ VV+ELV N++DAG+T + + V +++ D+
Sbjct: 1 MGKIIQLDDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIEIEVEEAGLAKIRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK + D +D I T GFRGEAL SI+ VS LE+ T + G
Sbjct: 61 GYGIDEEDVLIAFHRHATSK---IKDENDLFRIRTLGFRGEALPSIASVSRLEMKT-STG 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R V++G K R+ GT + DLF+N P R KYM++ + L ++
Sbjct: 117 EGAGNRVVIEGGKVEVFEKASARR--GTDLTITDLFFNTPARLKYMKTIHTE-LGNITDV 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP+V+F+ I +E +LL T + +L S +G+ L + +
Sbjct: 174 VNRLALSHPEVAFRLI--HNERKLLQTNGNGDVRQVLASIYGMAIAKQLVPIQGQSLDYK 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG+ S P + + + + IN R++ P+ K + + + L R
Sbjct: 232 ISGFASMPEVTRASRNYISTMINGRFIKNYPLAKAIQ------------EGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
P LLN+ L D+ P K V + + I+ + KI
Sbjct: 280 -----FPIVLLNIEMDPLLVDVNVHPSKMEVRISKEAELDELVTTIIKDTFKSKI 329
>gi|385332242|ref|YP_005886193.1| LOW QUALITY PROTEIN: DNA mismatch repair protein mutL [Marinobacter
adhaerens HP15]
gi|311695392|gb|ADP98265.1| LOW QUALITY PROTEIN: DNA mismatch repair protein mutL [Marinobacter
adhaerens HP15]
Length = 630
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 164/351 (46%), Gaps = 28/351 (7%)
Query: 13 NTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSGISRDGLVLL 71
N + +G V+ VV+ELV N++DAGA +V V V ++V DDGSGI D L L
Sbjct: 8 NQIAAGEVVERPASVVKELVENALDAGANRVDVEVEQGGVKLIRVRDDGSGIEEDDLPLA 67
Query: 72 GERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKGS 131
RHATSK +A +DD + + GFRGEALASIS VS L + ++ + R ++G
Sbjct: 68 LSRHATSK---IASLDDLEAVASLGFRGEALASISSVSRLTLTSRTESQEAASRVEVEGR 124
Query: 132 KCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKVS 191
+ + I VGTTV RDLF+N P RRK++++ + H V++CV R AL
Sbjct: 125 E-MDARISPAAHPVGTTVEVRDLFFNTPARRKFLRTEKTEFNH-VEECVRRQALSRFDAG 182
Query: 192 FKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNANDGALEISGYISSPY 248
F + + L S+ I S + F+D ++A L + G+++ P
Sbjct: 183 FTLRHNQRVVQSLRPAESALDRERRIGSLCGQ--QFIDNAVVIDAEATGLRLWGWVALPT 240
Query: 249 DSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPAY 308
S S QY ++N R + +L+ H +A L R PA+
Sbjct: 241 FSRSQADLQYFFVNGRVIRD----RLVAHAVR--------QAYRDVLYNNRH-----PAF 283
Query: 309 LLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
+L L + D+ P K V F+D V FI R + A D F
Sbjct: 284 VLYLEVDPATVDVNVHPTKHEVRFRDGRLVHDFIFRTLHKALADVRPDDHF 334
>gi|422725489|ref|ZP_16781949.1| DNA mismatch repair protein [Enterococcus faecalis TX0312]
gi|315159532|gb|EFU03549.1| DNA mismatch repair protein [Enterococcus faecalis TX0312]
Length = 710
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GHGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|427400704|ref|ZP_18891942.1| DNA mismatch repair protein mutL [Massilia timonae CCUG 45783]
gi|425720217|gb|EKU83140.1| DNA mismatch repair protein mutL [Massilia timonae CCUG 45783]
Length = 651
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 177/362 (48%), Gaps = 37/362 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVVDDG 60
I +LP+ + + + +G V+ + VV+EL+ N++DAGAT++ V + GV + + D+G
Sbjct: 19 IQQLPDQLISQIAAGEVVERPSAVVKELLENALDAGATQITVRLEEGGVKR--IAITDNG 76
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
GI+ + L L RHATSK+ L D+++ +GT GFRGEALASI+ V+ + I ++
Sbjct: 77 RGIAPEQLPLALARHATSKISSLHDLEN---VGTLGFRGEALASIASVAAVRITSRTPDA 133
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
+ + V + GTT+ +DL++N P RRK+++S + H + V
Sbjct: 134 AHAWEIVGSHEGT----VAPSSGACGTTIDVQDLYFNTPARRKFLKSEQTEYGH-CAEVV 188
Query: 181 LRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
RIAL P VSF + + D + ++ +L S F E++ + G L
Sbjct: 189 RRIALARPDVSFSLSHNGRTIDHWNVSEAAKRSAHILGSDFAEARL----ELDESAGPLH 244
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ GY+ P S + Q+ Y+N R+V K+L H + A L G R
Sbjct: 245 LHGYVGLPTASKARADGQFFYVNGRFVRD----KVLVHAVRA--------AYQDVLHGDR 292
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS--AWMKKIAHD 357
P+Y+L+L +L D+ P K V F+D V F+ A++ A AH
Sbjct: 293 -----FPSYVLSLDLDPALVDVNVHPSKIEVRFRDSRAVHQFVFHAVQRTLAQTSATAHG 347
Query: 358 SF 359
S
Sbjct: 348 SV 349
>gi|153853166|ref|ZP_01994575.1| hypothetical protein DORLON_00560 [Dorea longicatena DSM 13814]
gi|149753952|gb|EDM63883.1| DNA mismatch repair domain protein [Dorea longicatena DSM 13814]
Length = 701
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 168/356 (47%), Gaps = 30/356 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + +G V+ VV+ELV N++DAGAT + V + G+ ++++
Sbjct: 1 MSKIQVLDPITIDKIAAGEVIERPASVVKELVENAIDAGATAIVVEIKEGGIS--FMRIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI RD + RH+TSK+ +DD IG+ GFRGEAL+SIS V+ +E+ITK
Sbjct: 59 DNGCGIERDDVRSAFLRHSTSKI---RSVDDLVHIGSLGFRGEALSSISAVAQVELITKT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
+ G + G K L +D GTT + R LFYN P RRK++++ + H V
Sbjct: 116 RDQTFGTLYRIAGGKEEDL--EDTGAPDGTTFIIRQLFYNTPARRKFLKTPMTEASH-VG 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R+AL HP +SF+FI+ + L T + ++ +G + + L + +
Sbjct: 173 DLMTRLALSHPHISFQFIN--NGQSKLHTSGNGKLKDVIYHIYGRDIAANLLKAEYDAKG 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
L+++G++ P S + F+ Y+N RY I + + F +
Sbjct: 231 LKVTGFLGKPIISRGNRNFENYYVNGRYAKNNIISRAIEDAYKDFTMQHKY--------- 281
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +L++ D+ P K + F + + V I A+ +K
Sbjct: 282 --------PFVVLHIEIDGEHVDVNVHPTKMELRFNNQQEVYNAIYSAVDQGLHEK 329
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 1151 EFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGE 1210
E F + + ++ KV+ QV + + V +L +IDQHAA ER+ L K L
Sbjct: 497 ELFEDHLLTREAMQKYKVVGQVFETYWLVEYDNSLYIIDQHAAHERV----LYEKTL--- 549
Query: 1211 GKSVAYLDAEQELVLPEIGY-------QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNL 1263
KS+ + +++ P I +LL + +Q G+ I G S+
Sbjct: 550 -KSMKTREFTSQMISPPIVLNLSMQEAELLNTYMDQFTRIGF--EIEEFGQDSY------ 600
Query: 1264 LQRQITVITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAI 1322
+ AVP +F + ++ L++ L L+D + +P + + S +C+ A+
Sbjct: 601 --------AVRAVPDNLFSIAKKEL-LIQMLDSLSDEITRNQSPDLIDEKIASMSCKAAV 651
Query: 1323 MFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1363
L E ++ EL + C HGRPT + + E
Sbjct: 652 KGNMKLSVQEVDALIGELLSLDNPYHCPHGRPTIIAMTKRE 692
>gi|372223810|ref|ZP_09502231.1| DNA mismatch repair protein MutL [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 614
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 180/371 (48%), Gaps = 31/371 (8%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGA--TKVFVYVGVCNCYVKVVDDG 60
I LP+ V N + +G V+ VV+EL+ N++DAGA K+ V G ++VVD+G
Sbjct: 4 VIKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGADAIKLIVKDG-GKTLIQVVDNG 62
Query: 61 SGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGR 120
G+S L ERHATSK+ D+ + T GFRGEALASI+ ++ +++ TK
Sbjct: 63 DGMSETDARLAFERHATSKINKAEDL---FNLNTKGFRGEALASIAAIAHVDLQTKKDDA 119
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
G + GS + K GT++ ++LF+N P RR +++S ++ H +
Sbjct: 120 EVGTAIKIAGSSIKAQEVVVTPK--GTSLAVKNLFFNIPARRNFLKSDQVELRH-ITDEF 176
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
R+ALVHP +SF+F + +E S ++ FG + L V+ + ++I
Sbjct: 177 HRVALVHPNISFQFYNNGAE---YFNLPIESHRQRIVHVFGNKMNERLVPVSEDTDVVKI 233
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSDSWKANNGFLKGKR 299
G+I P + + Q+ + N+RY+ K P LNH + A+F+ G L
Sbjct: 234 HGFICKPEFARKSRGEQFFFANNRYI-KSP---YLNHAVTAAFE---------GLL---- 276
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
KS P Y L L + D+ P KT V F D + A + AI+ + +
Sbjct: 277 -KSDTHPGYFLFLEVNPATIDINIHPTKTEVKFDDEHTLYAILRSAIKHSLGQFNVAPVL 335
Query: 360 DVDMLEDAELP 370
D + +D ++P
Sbjct: 336 DFESNQDLDMP 346
>gi|113968940|ref|YP_732733.1| DNA mismatch repair protein [Shewanella sp. MR-4]
gi|123029966|sp|Q0HMP1.1|MUTL_SHESM RecName: Full=DNA mismatch repair protein MutL
gi|113883624|gb|ABI37676.1| DNA mismatch repair protein MutL [Shewanella sp. MR-4]
Length = 644
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 172/355 (48%), Gaps = 35/355 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +K+ D+
Sbjct: 1 MG-IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDN 59
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI +D L L RHATSKL L DD I +FGFRGEALASIS VS L + ++
Sbjct: 60 GSGIPKDELALALSRHATSKLHSL---DDLEAILSFGFRGEALASISSVSRLTLTSRTAE 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ ++ +G + + + VG+T+ DLF+N P RR++++S + H + +
Sbjct: 117 QTEAWQAYAEGVD-MAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTH-IDEW 174
Query: 180 VLRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNAND 235
+ RIALV + F + ++ + L L G + F DE V
Sbjct: 175 LKRIALVRGDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQVAGRQ---FADEALRVECQH 231
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
L +SGY+ SP+ ++ + Y Y+N R V +L+NH F
Sbjct: 232 DDLRLSGYLQSPWSTV-LTDTHYFYVNGRLVRD----RLVNH-----------AVRQAFA 275
Query: 296 KGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
+ + P Y+L L PH + D+ P K V F V +I +A++SA
Sbjct: 276 QKAEVEQ---PGYVLMLDIDPHQV-DVNVHPAKHEVRFHQSRYVHDYILQALQSA 326
>gi|329957333|ref|ZP_08297853.1| DNA mismatch repair protein [Bacteroides clarus YIT 12056]
gi|328523046|gb|EGF50149.1| DNA mismatch repair protein [Bacteroides clarus YIT 12056]
Length = 631
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 186/383 (48%), Gaps = 46/383 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I+ LP++V N + +G V+ V++ELV N++DA A ++ V + ++V+DDG G
Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAGEIHVLITDAGKTCIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ +D+ + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSKIREASDL---FALRTMGFRGEALASIAAVAEVELKTRPADEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R V+ GSK + ++ V G+ ++LF+N P RRK+++++ + L ++
Sbjct: 122 GTRLVIAGSKV------ESQEAVSCPKGSNFSVKNLFFNIPARRKFLKANSTE-LSNILT 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIALVHP V+F + S D L +++ FG + L V+ + +
Sbjct: 175 EFERIALVHPDVAFY---LYSNDTELFNLPVMPLRQRILAVFGKKLNQQLLSVDVDTTMI 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++SG+++ P S A QY ++N RY+ HK + D+++
Sbjct: 232 KVSGFVAKPETSRKKGAHQYFFVNGRYMRHPYFHKAV---------MDAYE--------- 273
Query: 299 RSKSQACPA-----YLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
Q PA Y + + D+ P KT + F++ + + + A++ + K
Sbjct: 274 ----QLIPAGEQISYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSAAVKESLGKF 329
Query: 354 IAHDSFDVDMLEDAELP-LESSR 375
A S D D ++P E SR
Sbjct: 330 NAVPSIDFDTEGMPDIPAFEQSR 352
>gi|257080442|ref|ZP_05574803.1| DNA mismatch repair protein [Enterococcus faecalis E1Sol]
gi|256988472|gb|EEU75774.1| DNA mismatch repair protein [Enterococcus faecalis E1Sol]
Length = 710
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|157368676|ref|YP_001476665.1| DNA mismatch repair protein [Serratia proteamaculans 568]
gi|167012378|sp|A8G8U7.1|MUTL_SERP5 RecName: Full=DNA mismatch repair protein MutL
gi|157320440|gb|ABV39537.1| DNA mismatch repair protein MutL [Serratia proteamaculans 568]
Length = 624
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 172/349 (49%), Gaps = 32/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK ++ +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARHATSK---ISTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTAEQNE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + +G+T+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDQAVTVKPAAHPIGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLD---EVNANDGAL 238
IAL V+ I++ +L+ ++ + G I +FL ++ G L
Sbjct: 178 IALARFDVA---INLSHNGKLMRQYRAAKDESQYERRLGSICGPAFLQHALNISWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P + + QY Y+NSR + +L+NH A D K +
Sbjct: 235 TIRGWVADPAGARQLGEMQYCYVNSRMMRD----RLINH-AIRQAYQDQLKDDQQ----- 284
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 285 -------PAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|304438412|ref|ZP_07398352.1| DNA mismatch repair protein MutL [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368495|gb|EFM22180.1| DNA mismatch repair protein MutL [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 622
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 174/353 (49%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L +A N + +G V+ VV+ELV N++DAGAT V V + G +++V D+
Sbjct: 1 MTRIHVLDDATINKIAAGEVVERPASVVKELVENAMDAGATAVEVEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + RHATSK+ +D++ I T GFRGEAL +I+ VS ++T+
Sbjct: 61 GRGMTGEDARAAILRHATSKIAAASDLET---IATLGFRGEALPTIASVSHFSLLTRQAA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G I+D VGT+V DLF+N P R+K+++++ + +
Sbjct: 118 DDLGTRVDISGGGTPM--IEDAGCAVGTSVRVEDLFFNTPARKKFLKTNATEA-GKISDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA- 237
V+R+AL P ++F+FI+ + + + LA I S +G + S L ++ D A
Sbjct: 175 VIRLALSRPDIAFRFIN---NNRMTIMTAGDGDLARTIGSIYGGDAASALIPLDFYDDAA 231
Query: 238 -LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ I+GYIS P S +A+Q +N R + I K ++++ S GF
Sbjct: 232 DIRITGYISKPSLIRSSRAWQTYIVNGRTIQNRAIAKAIDNV------YRSLVPKMGF-- 283
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P ++ + P D+ P KT + F+D + + +A+ A
Sbjct: 284 ---------PLAVIVITVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKAVLDA 327
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 80/204 (39%), Gaps = 50/204 (24%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1215
+ QVD +I + TL +IDQHAA ERI + L H +LS +
Sbjct: 436 IGQVDLTYIIAQSTATLYIIDQHAAHERILFDRFSAQTDGIPSQQMLVHAILSFDAHEAQ 495
Query: 1216 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
Y++ EL +G+ L G R++ L
Sbjct: 496 YIEENAEL-FDRLGFHL-----------------EAAGERTYR--------------LTE 523
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKACRGAIMFGDSLLPSEC 1333
P ++ + E L L D T P+ LR + + ACR AI G+ L +
Sbjct: 524 TPADVPTKEAEGIIREILASLGDL---HTATPANLREAGIATMACRAAIKAGEELSIRQM 580
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTV 1357
+++EEL+ T F C HGRPT +
Sbjct: 581 EILLEELRATPFPFTCPHGRPTIL 604
>gi|29377616|ref|NP_816770.1| DNA mismatch repair protein [Enterococcus faecalis V583]
gi|257418005|ref|ZP_05594999.1| DNA mismatch repair protein mutL [Enterococcus faecalis T11]
gi|307288399|ref|ZP_07568390.1| DNA mismatch repair protein [Enterococcus faecalis TX0109]
gi|422713829|ref|ZP_16770577.1| DNA mismatch repair protein [Enterococcus faecalis TX0309A]
gi|422718546|ref|ZP_16775199.1| DNA mismatch repair protein [Enterococcus faecalis TX0309B]
gi|29345083|gb|AAO82840.1| DNA mismatch repair protein HexB [Enterococcus faecalis V583]
gi|257159833|gb|EEU89793.1| DNA mismatch repair protein mutL [Enterococcus faecalis T11]
gi|306500631|gb|EFM69957.1| DNA mismatch repair protein [Enterococcus faecalis TX0109]
gi|315573187|gb|EFU85378.1| DNA mismatch repair protein [Enterococcus faecalis TX0309B]
gi|315581311|gb|EFU93502.1| DNA mismatch repair protein [Enterococcus faecalis TX0309A]
Length = 710
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|229547408|ref|ZP_04436133.1| DNA mismatch repair protein [Enterococcus faecalis TX1322]
gi|256854834|ref|ZP_05560198.1| DNA mismatch repair protein HexB [Enterococcus faecalis T8]
gi|257417287|ref|ZP_05594281.1| MutL [Enterococcus faecalis ARO1/DG]
gi|422686956|ref|ZP_16745146.1| DNA mismatch repair protein [Enterococcus faecalis TX4000]
gi|229307440|gb|EEN73427.1| DNA mismatch repair protein [Enterococcus faecalis TX1322]
gi|256710394|gb|EEU25438.1| DNA mismatch repair protein HexB [Enterococcus faecalis T8]
gi|257159115|gb|EEU89075.1| MutL [Enterococcus faecalis ARO1/DG]
gi|315028310|gb|EFT40242.1| DNA mismatch repair protein [Enterococcus faecalis TX4000]
Length = 710
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|402756313|ref|ZP_10858569.1| DNA mismatch repair protein MutL family protein [Acinetobacter sp.
NCTC 7422]
Length = 646
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 166/346 (47%), Gaps = 33/346 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDDGSG 62
I+ L A+ N + +G V+ + VV+EL+ NS+DAGAT++ + V + ++++D+G+G
Sbjct: 9 IHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIIRVAQGGSTLIEIIDNGNG 68
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I D L L RHATSK+ DD I + GFRGEALASI+ VS L + + +
Sbjct: 69 IHPDDLSLAVMRHATSKI---QTADDLHAIVSLGFRGEALASIAAVSRLTLTSSQDEQGV 125
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
GY+ + G+ + I GT + +DLF+N P RRK+++ P + +++ V R
Sbjct: 126 GYQVEVNGTAFDHQQIQAVAAQKGTHIRVQDLFFNVPARRKFLK-KPTTEFNHIEEIVRR 184
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPL------ALLISSFGIEDFSFLDEVNANDG 236
+AL H + F ++ L + S L LL F I++ ++D + N
Sbjct: 185 LALTHFDIRF-VLEHNDNIRLNLPVADSGELRYQRVQQLLGQQF-IQNAYWIDAESIN-- 240
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ +SG++ P D+ + QYVY+N R V I L A G L
Sbjct: 241 -MRLSGWLGHPSDARAQADMQYVYVNGRIVKDKTISHALR------------MAYEGILH 287
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 342
G + S YLL L D+ P K + F + V F+
Sbjct: 288 GHQHSS-----YLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFV 328
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 30/198 (15%)
Query: 1177 IPVVAGGT--LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQ 1234
I ++A T L ++D HAA ERI L++++ S K + Q+L++P++ + +
Sbjct: 465 IYILAQNTEGLIIVDMHAAHERILLQQMK----SAWDKPEFW--TSQQLLIPKV-VSITR 517
Query: 1235 NFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCI-----FGVNLSDVDL 1289
A +++D + Q R L + Q + + VP I FG NL +
Sbjct: 518 MQATRVED------LQPQLQR---LGLEIDQYGDEQVIVRGVPAILHKADFG-NL----V 563
Query: 1290 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1349
E L L D + +L AC GA+ L SE ++ +++QT QC
Sbjct: 564 PELLNDLDPNDEARGLLQKRDELLAGMACHGAVRAHRQLSLSEMNALLRQMEQTEFASQC 623
Query: 1350 AHGRPT--TVPLVNLEAL 1365
HGRPT PL L+ L
Sbjct: 624 NHGRPTWRAFPLNQLDKL 641
>gi|399575652|ref|ZP_10769410.1| DNA mismatch repair protein mutl [Halogranum salarium B-1]
gi|399239920|gb|EJN60846.1| DNA mismatch repair protein mutl [Halogranum salarium B-1]
Length = 756
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 169/358 (47%), Gaps = 37/358 (10%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
TI L + + +G V+ VV+ELV NS+DA A++V V V V+V DDG
Sbjct: 10 TIRALDQTTIQRIAAGEVVERPASVVKELVENSLDADASRVSVAVWNGGKDGVRVRDDGV 69
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G++ D L + + H TSK+ + D++ TG+ T GFRGEAL +IS VS + +K G
Sbjct: 70 GMTEDELAVAVDEHTTSKISDIDDLE--TGVATLGFRGEALHTISAVSRTTVRSKPRGSA 127
Query: 122 N-GYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G ++G + + R GTT+ DLF+N P R+K++++ + H V
Sbjct: 128 GAGAELTVEGGD-----VGEVRPAGCPAGTTIEVDDLFFNTPARKKFLKTDATEFDH-VN 181
Query: 178 KCVLRIALVHPKVSFKFIDMESED-ELLCTCSSSSPLALLISSFGIEDFSFLDEVN---A 233
V + AL +P V+ + +E D E+ T S + ++S +G E + V A
Sbjct: 182 TVVTQYALANPDVA---VSLEHNDREVFATEGQGSLESTVLSVYGREVAEAMTRVESDPA 238
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
ND ISG +S P + S + + ++N RYV G + + + A G
Sbjct: 239 NDAVASISGLVSHPETTRSGREYLSTFVNGRYVTAGSLREAV------------LDAYGG 286
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
L R P +L L P + D+ P K V F D V A +E A+ SA +
Sbjct: 287 QLAPDR-----YPFAVLFLDVPPNSVDVNVHPRKMEVRFDDESGVKAAVESAVESALL 339
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 21/194 (10%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
+VL Q+ ++ A L ++DQHAADER+ E LR ++ E EL
Sbjct: 556 RVLGQLFDTYLVAEAPDGLVLVDQHAADERVNYERLRREIRGDTPTQGLAEPVELELTAR 615
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1286
E L + +A+ + + G+ R+ + +++ +VP +F L
Sbjct: 616 EAA--LFEEYADALAELGF------DAERTDERT----------VSVRSVPAVFDAALEP 657
Query: 1287 VDLLEFLQQL--ADTDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1343
L + L A+ DG T +V +L AC +I SL ++E L
Sbjct: 658 ELLRDVLTAFVEAERDGGRETVDAVADSLLADLACHPSITGNTSLTEGSVVELLEALDAC 717
Query: 1344 SLCFQCAHGRPTTV 1357
+ C HGRP +
Sbjct: 718 ENPYACPHGRPVVI 731
>gi|433448797|ref|ZP_20411662.1| DNA mismatch repair protein [Weissella ceti NC36]
gi|429539186|gb|ELA07223.1| DNA mismatch repair protein [Weissella ceti NC36]
Length = 658
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 162/335 (48%), Gaps = 43/335 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L + + N + +G V+ VV+ELV N++DA AT++ V V ++V+DD
Sbjct: 1 MGKIATLSDVLANQIAAGEVIERPASVVKELVENAIDAKATRIDVLVEAAGTDLIRVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + RHATSK+ D+ + + GFRGEAL SI+ VS + ++T
Sbjct: 61 GQGIADDDVETAFLRHATSKITTRHDL---FRVHSLGFRGEALPSIASVSEVTLVTAQAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
+G + KG GI +E GT + ++LF+N P R KY++ SP L
Sbjct: 118 SEHGSQVRYKG------GILEEHTSASGRQGTDITVKNLFFNTPARLKYLK-SPSTELAQ 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
+ + IAL HP+VS + + E++ T + + ++ S +G + + + A D
Sbjct: 171 ITDVLHHIALSHPEVSLRL--RHGDKEIMRTVGNGNLQQVIASIYGTQQARKMVDFEAED 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
+I+GY S P + + +++ V IN RYV +++ N +
Sbjct: 229 LDFKITGYTSLPELTRANRSYMAVLINGRYV-------------------KNYQLTNAII 269
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHV 330
KG SK L+ R P ++ D+ DPL V
Sbjct: 270 KGYGSK-------LMVGRFPIAVIDIQMDPLLVDV 297
>gi|389575733|ref|ZP_10165761.1| DNA mismatch repair protein MutL [Eubacterium cellulosolvens 6]
gi|389311218|gb|EIM56151.1| DNA mismatch repair protein MutL [Eubacterium cellulosolvens 6]
Length = 772
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 175/358 (48%), Gaps = 34/358 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M +I L + + + +G V+ V++EL N++DAGAT V + + ++++ D+
Sbjct: 1 MRSIELLDKQTIDQIAAGEVVERPASVIKELTENAIDAGATAVTIEIRDGGTTFMRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G+GI D + RHATSK+ D+ I + GFRGEAL+SIS V+ +E ITK
Sbjct: 61 GAGIPADQVKKAFLRHATSKIRKAEDL---VNIASLGFRGEALSSISAVAQVECITKTPE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
G R ++G G++ E +++ GTT + R+LF+N P R K+++ +P +
Sbjct: 118 ALTGIRYCIEG------GVEKEYEEIGAPGGTTFIIRNLFFNTPARAKFLK-APVTEGNH 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
V V +AL HP++SFKFI ++ L T + + ++ FG + L V+A
Sbjct: 171 VSSFVEELALSHPEISFKFI--QNGQNKLYTSGNGNLKEIVYQIFGRDLTRELVAVDART 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
+ + G+I +P + + F+ +IN RYV I K + D++ +GFL
Sbjct: 229 ELMHVHGFIGNPNVARGNRTFENYFINGRYVKNKVIAKAI---------EDAY---HGFL 276
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
+ P LL L D+ P K V D E V + I++A M +
Sbjct: 277 MQHK-----YPFTLLYLDIVSEKVDVNVHPQKLEVRISDQEGVYHQLCLTIQNALMNR 329
Score = 48.9 bits (115), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 31/186 (16%)
Query: 1184 TLAVIDQHAADERIRLEEL----RHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQ 1239
+L +IDQHAA E++ E + R K + + L L L QLL++ +
Sbjct: 603 SLYIIDQHAAHEKVNYERMMKAYREKTIHSQ-----MLYPSIVLDLSRREAQLLESNLKT 657
Query: 1240 IKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLE-FLQQLAD 1298
+D G+ + + G SF N AVP NL V E F+Q LA+
Sbjct: 658 FEDLGF--EVESFGGNSFKIN--------------AVPA----NLYSVASDELFMQILAE 697
Query: 1299 TDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1357
+ P ++ L S +C+ A+ + L E +++EL + C HGRPT +
Sbjct: 698 LESLGEVSPKLIPEKLASMSCKAAVKGNNRLSVEEANALIDELLTLENPYNCPHGRPTII 757
Query: 1358 PLVNLE 1363
+ E
Sbjct: 758 SMTRYE 763
>gi|422728630|ref|ZP_16785038.1| DNA mismatch repair protein [Enterococcus faecalis TX0012]
gi|315150784|gb|EFT94800.1| DNA mismatch repair protein [Enterococcus faecalis TX0012]
Length = 710
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|294672827|ref|YP_003573443.1| DNA mismatch repair protein MutL [Prevotella ruminicola 23]
gi|294471669|gb|ADE81058.1| DNA mismatch repair protein MutL [Prevotella ruminicola 23]
Length = 612
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 186/405 (45%), Gaps = 40/405 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDD 59
M I+ LP++V N + +G V+ V++ELV NSVDAGA + + V ++V+DD
Sbjct: 1 MDLIHLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGAKTIHVIVVDAGRTSIQVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S L ERHATSK ++ DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 61 GKGMSETDARLAFERHATSK---ISQADDLFALHTMGFRGEALASIAAVAQVELQTRRQE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + + GSK R++ VG+ +LF+N P RRK+++++ + L+
Sbjct: 118 DEIGTKVSIAGSKV-------TRQEPVSCPVGSNFKVDNLFFNVPARRKFLKTNATE-LN 169
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
++ RI LV+P + F + E + + S + FG + L V +
Sbjct: 170 NILTAFERIVLVYPDIHFTLHNNGVE---MLNLRAGSVRQRIADVFGKQYNQDLVPVEVH 226
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
+SG++ P + Y ++N R++ HK + KA +
Sbjct: 227 TAMCTVSGFVGKPEAARKKTGCDYFFVNGRFMKHPYFHKAV------------MKAYDRL 274
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
+ + A P Y L + D+ P KT + F++ + + + A+R K
Sbjct: 275 V----PEGMAVP-YFLYIEVEPGEIDVNIHPTKTEIKFENEQAIWQILSAAVRDGIGKYC 329
Query: 355 AHDSFDVDMLEDAELPL---ESSRFQSHQSSTHLHSSPLKNLAKQ 396
S D D ++PL S+ FQ ++ ++ +P N KQ
Sbjct: 330 EVPSIDFDTQGQPDIPLFDSNSNTFQDSFAAPKVNYNPDYNPFKQ 374
>gi|229547981|ref|ZP_04436706.1| DNA mismatch repair protein [Enterococcus faecalis ATCC 29200]
gi|257091401|ref|ZP_05585762.1| DNA mismatch repair protein mutL [Enterococcus faecalis CH188]
gi|312905469|ref|ZP_07764583.1| DNA mismatch repair protein [Enterococcus faecalis TX0635]
gi|422689909|ref|ZP_16747999.1| DNA mismatch repair protein [Enterococcus faecalis TX0630]
gi|422732766|ref|ZP_16789095.1| DNA mismatch repair protein [Enterococcus faecalis TX0645]
gi|229306857|gb|EEN72853.1| DNA mismatch repair protein [Enterococcus faecalis ATCC 29200]
gi|257000213|gb|EEU86733.1| DNA mismatch repair protein mutL [Enterococcus faecalis CH188]
gi|310631198|gb|EFQ14481.1| DNA mismatch repair protein [Enterococcus faecalis TX0635]
gi|315161300|gb|EFU05317.1| DNA mismatch repair protein [Enterococcus faecalis TX0645]
gi|315577077|gb|EFU89268.1| DNA mismatch repair protein [Enterococcus faecalis TX0630]
Length = 710
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|91775737|ref|YP_545493.1| DNA mismatch repair protein MutL [Methylobacillus flagellatus KT]
gi|91709724|gb|ABE49652.1| DNA mismatch repair protein MutL [Methylobacillus flagellatus KT]
Length = 613
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 186/393 (47%), Gaps = 32/393 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M +I LP+ + + + +G V+ ++E++ NS+DAG+T V V + +KV D+
Sbjct: 1 MPSIKLLPDQLISQIAAGEVVERPASALKEILENSLDAGSTDVAVALQAGGIKQIKVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+RD L L RHATSK+ L D++ + + GFRGEALASI+ +S +I +
Sbjct: 61 GGGIARDELRLALTRHATSKIASLEDLE---CVASLGFRGEALASIAAISRTQITSYHPD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ +R +GS I+ D GT V +DL++N P RRK++++ + H ++
Sbjct: 118 ERHAWRIASEGS--FLTDIEPAALDAGTIVDIQDLYFNTPARRKFLKTENTEFGH-CEEA 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDGAL 238
RIAL P V+ L S+ +L F E F +LDEV A L
Sbjct: 175 FRRIALSCPDVNMLLQHNGRAVARLAAGSADKRFEDILGQEFAAEAF-YLDEVAAG---L 230
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G + P S + QYVY+N R+V KL++H +A L
Sbjct: 231 RVWGMAAKPTFSRHARDTQYVYVNGRFVRD----KLISHAI--------RQAYQDVLHHD 278
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
R PA++L L +L D+ P KT V F+D + V FI A+ + +
Sbjct: 279 RH-----PAFVLFLELDPALVDVNVHPSKTEVRFRDGQSVHRFIFHALHKSLATPVGLPG 333
Query: 359 FDVDML---EDAELPLESSRFQSHQSSTHLHSS 388
+ L E A P ++ + QS+ L +S
Sbjct: 334 SLMPGLATGEKAAAPAQAPSYPRFQSNIDLRAS 366
Score = 43.9 bits (102), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L V+D HAA ERI E+L++ + + VA Q L+LP + +Q D
Sbjct: 439 LIVVDMHAAHERIMYEKLKNAL---DASRVAM----QPLLLP-VSFQ---------ADRL 481
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVI--TLLAVPCIFGVNLSDVDLLEFLQQ-LADTDG 1301
+ + Q + + N L L I V+ T LAV I V L D D + + LAD
Sbjct: 482 EVATVEEQQALAEN-GLAQLGFDIAVLSPTTLAVRAI-PVMLKDADAVALARDVLADLRQ 539
Query: 1302 SSTTPPSVLR---VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1355
+ R +L + AC A+ +L E ++ +++ T QC HGRPT
Sbjct: 540 YGASRAFTERRNALLGTMACHAAVRANRTLTIPEMNALLRDMEATERSGQCNHGRPT 596
>gi|317472766|ref|ZP_07932078.1| DNA mismatch repair protein MutL [Anaerostipes sp. 3_2_56FAA]
gi|316899758|gb|EFV21760.1| DNA mismatch repair protein MutL [Anaerostipes sp. 3_2_56FAA]
Length = 620
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 169/349 (48%), Gaps = 28/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I L + + + +G V+ VV+ELV N++DA AT V V + ++V D+
Sbjct: 1 MAEIQLLDQKTIDNIAAGEVIERPASVVKELVENAIDAKATAVTVEIRDGGMTLMRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI ++ + RHATSK+ ++D + + GFRGEAL+SIS V +E+ITK G
Sbjct: 61 GCGIPKEEVRTAFLRHATSKI---RTVEDLVSVSSLGFRGEALSSISAVGQVEVITKTAG 117
Query: 120 RPNGYR-KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
+G K+ G + G+D+ GTT + R+LFYN P RRK+++ SP V++
Sbjct: 118 AFSGVSYKIFGGEEQ---GLDEIGAPDGTTFLVRNLFYNTPARRKFLK-SPVTEAGYVEQ 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
++ +AL HP ++FKFI + + T + + ++ +G + L ++ +
Sbjct: 174 IMVHMALSHPDIAFKFI--HNSKNKMYTSGNGNVKDIIYHLYGRDVAGALLPISLKGPTV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ GY+ P+ S + ++ +IN RY+ I+K + +F + +
Sbjct: 232 SVDGYVGKPFISRGNRNYESYFINGRYIKSKIIYKAIEDGYKTFTMAHKY---------- 281
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P LN+ L D+ P K + F++ + + + I+
Sbjct: 282 -------PFVCLNIEVEPELLDVNVHPTKMEIRFRNEKELYELLASGIK 323
Score = 40.8 bits (94), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 28/204 (13%)
Query: 1165 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEEL----RHKVLSGEGKSVAYLDAE 1220
D KV+ Q+ K + + L ++DQHAA E++ E+L R K + +G Y+
Sbjct: 431 DRKVIGQLFKTYWLIEYEDQLFIMDQHAAHEKVNYEKLMKSFREKKIYSQGVEPPYV--- 487
Query: 1221 QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC-I 1279
+ L ++L+ + ++ G+ I G F + VP +
Sbjct: 488 --VTLSMAEAKVLEETKDIFQELGF--TIEAFGGNEF--------------CIRQVPANL 529
Query: 1280 FGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1339
+G+ ++ +E L L DG P + + S AC+ + + E +++
Sbjct: 530 YGLKEKEL-FMELLDSLT-ADGVKKDPEMITDKIASMACKMSAKGNQRMSLPEVRNLLDL 587
Query: 1340 LKQTSLCFQCAHGRPTTVPLVNLE 1363
L + + C HGRPT + + E
Sbjct: 588 LMECENPYTCPHGRPTMIKMSKYE 611
>gi|422704142|ref|ZP_16761957.1| DNA mismatch repair protein [Enterococcus faecalis TX1302]
gi|315164364|gb|EFU08381.1| DNA mismatch repair protein [Enterococcus faecalis TX1302]
Length = 710
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|429085063|ref|ZP_19148047.1| DNA mismatch repair protein MutL [Cronobacter condimenti 1330]
gi|426545903|emb|CCJ74088.1| DNA mismatch repair protein MutL [Cronobacter condimenti 1330]
Length = 632
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 173/359 (48%), Gaps = 31/359 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGA+++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIDIERGGAKLIRIRDNGGG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I ++ L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKEELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMDVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GALE 239
IAL V+ S+P + S I +FL++ A + G L
Sbjct: 178 IALARFDVTINLSHNGKMMRQYRAVQGSTPRERRLGS--ICGPAFLEQALAIEWQHGDLA 235
Query: 240 ISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 236 LRGWVAEPKGTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQQ----- 285
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 286 -------PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAAN 336
>gi|256958441|ref|ZP_05562612.1| MutL [Enterococcus faecalis DS5]
gi|257078247|ref|ZP_05572608.1| MutL [Enterococcus faecalis JH1]
gi|307270518|ref|ZP_07551816.1| DNA mismatch repair protein [Enterococcus faecalis TX4248]
gi|397701307|ref|YP_006539095.1| DNA mismatch repair protein mutL [Enterococcus faecalis D32]
gi|422696024|ref|ZP_16754001.1| DNA mismatch repair protein [Enterococcus faecalis TX4244]
gi|422711204|ref|ZP_16768137.1| DNA mismatch repair protein [Enterococcus faecalis TX0027]
gi|256948937|gb|EEU65569.1| MutL [Enterococcus faecalis DS5]
gi|256986277|gb|EEU73579.1| MutL [Enterococcus faecalis JH1]
gi|306513099|gb|EFM81733.1| DNA mismatch repair protein [Enterococcus faecalis TX4248]
gi|315034869|gb|EFT46801.1| DNA mismatch repair protein [Enterococcus faecalis TX0027]
gi|315146538|gb|EFT90554.1| DNA mismatch repair protein [Enterococcus faecalis TX4244]
gi|397337946|gb|AFO45618.1| DNA mismatch repair protein mutL [Enterococcus faecalis D32]
Length = 710
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|300861473|ref|ZP_07107557.1| DNA mismatch repair protein, C-terminal domain protein
[Enterococcus faecalis TUSoD Ef11]
gi|422740016|ref|ZP_16795173.1| DNA mismatch repair protein [Enterococcus faecalis TX2141]
gi|428768271|ref|YP_007154382.1| DNA mismatch repair protein [Enterococcus faecalis str. Symbioflor
1]
gi|295114466|emb|CBL33103.1| DNA mismatch repair protein MutL [Enterococcus sp. 7L76]
gi|300848934|gb|EFK76687.1| DNA mismatch repair protein, C-terminal domain protein
[Enterococcus faecalis TUSoD Ef11]
gi|315144209|gb|EFT88225.1| DNA mismatch repair protein [Enterococcus faecalis TX2141]
gi|427186444|emb|CCO73668.1| DNA mismatch repair protein [Enterococcus faecalis str. Symbioflor
1]
Length = 710
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|256419867|ref|YP_003120520.1| DNA mismatch repair protein MutL [Chitinophaga pinensis DSM 2588]
gi|256034775|gb|ACU58319.1| DNA mismatch repair protein MutL [Chitinophaga pinensis DSM 2588]
Length = 630
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 175/358 (48%), Gaps = 43/358 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
IN LP+ + N + +G V+ V+EL+ N+VDAGAT++ + V+V+D+G G
Sbjct: 5 INLLPDNIANQIAAGEVIQRPASAVKELLENAVDAGATEIQLIIRDAGKELVQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK + ++D I T GFRGEALASI+ VS +E+ T+ G
Sbjct: 65 MSETDARMCFERHATSK---IQTINDLFSIRTMGFRGEALASIAAVSQVELKTRLRGSEI 121
Query: 123 GYRKVMKGSKCLYLGIDD---ERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G Y+ ID+ +++++ GT++ ++LF+N P RR +++S+ ++ H
Sbjct: 122 G----------TYIEIDNSAVKKQEMCQTAEGTSIAMKNLFFNVPARRNFLKSNAAEMRH 171
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
V + + R+A+ P++ F + + + L S +I+ G + + V
Sbjct: 172 IVDEFI-RVAMAFPQIQFT---LTNNTQQLFYLEKGSLKQRIIAILGQHYNARIVSVKET 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
+ + G++ P + + Q+ ++N+R++ +H + + A +DS+
Sbjct: 228 TDYMNVHGFVGKPETAKKTRGDQFFFVNNRFIKSPYLHHAIMNAFAEMIPADSF------ 281
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P Y+L + D+ P K + F D + + AF++ A++ A +
Sbjct: 282 -----------PLYVLFIDLDPGHVDINVHPTKQEIKFDDEKLMYAFVQSAVKHALAQ 328
>gi|389878742|ref|YP_006372307.1| DNA mismatch repair protein MutL [Tistrella mobilis KA081020-065]
gi|388529526|gb|AFK54723.1| DNA mismatch repair protein MutL [Tistrella mobilis KA081020-065]
Length = 642
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 160/354 (45%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I RLPE + N + +G V+ V+ELV N++DAGA +V V +G + V DD
Sbjct: 1 MSRIRRLPETLVNRIAAGEVVERPAAAVKELVENAIDAGARQVDVVLGAGGRSLIAVTDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ D L L ERHATSK LAD DD I T GFRGEAL SI V+ L I ++ G
Sbjct: 61 GIGMDADDLELAIERHATSK---LAD-DDLVEIDTLGFRGEALPSIGAVARLRITSRRRG 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
V++G + + GT V RDLFY P R K++++ + +V
Sbjct: 117 ADTALEIVVEGG--IRAPVKPASGPPGTRVEVRDLFYATPARLKFLKAE-RTETQAVADA 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELL---CTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R+A+ +P++ F D E + + LA L G + + E+ A
Sbjct: 174 LRRLAMAYPEIGFSLADGERRIFAFRPETGTGAEARLARLGRIMGRDFAANALEIEAERD 233
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
L + G+ P + QY+++N R V +L+ + + A FL
Sbjct: 234 LLRLEGHAGLPTLNRGTAQHQYLFVNGRPVRD----RLMQGVVRA--------AYQDFLA 281
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
R P L L P L D+ P K V F+D + V I A+R A
Sbjct: 282 RDRH-----PMVALFLTVPARLVDVNVHPAKAEVRFRDPQLVRGLIIGALRHAL 330
Score = 43.5 bits (101), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 78/192 (40%), Gaps = 19/192 (9%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEEL-RHKVLSGEGKSVAYLDAEQELVLPE 1227
L Q+ +I L V+DQHAA ER+ E + RH +G Q L+LPE
Sbjct: 457 LAQLHDTYILAETRDGLVVVDQHAAHERLVYERMKRHMAEAGV--------PSQGLLLPE 508
Query: 1228 IGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDV 1287
+ E + D + + + L + + + VP + G +
Sbjct: 509 V-----VELDEAVAD-----GLLRRAAELGRLGLEIEAFGPGAVLVRGVPALLGRVDAQG 558
Query: 1288 DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1347
+ + ++A+ D + + V + AC G++ G L E ++ E++ T
Sbjct: 559 LVRDLGDEIAEYDEALALADRLEAVCATMACHGSVRAGRRLTIPEMNALLREMEITPHSG 618
Query: 1348 QCAHGRPTTVPL 1359
QC HGRPT V L
Sbjct: 619 QCNHGRPTWVSL 630
>gi|336451941|ref|ZP_08622375.1| DNA mismatch repair protein MutL [Idiomarina sp. A28L]
gi|336281274|gb|EGN74557.1| DNA mismatch repair protein MutL [Idiomarina sp. A28L]
Length = 657
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 171/356 (48%), Gaps = 34/356 (9%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGS 61
I LP + N + +G V+ VV+ELV N +DAGAT++ + + +++ D+G+
Sbjct: 2 AIRLLPPQLANQIAAGEVVERPASVVKELVENCIDAGATELRIDIEKGGARRIRIRDNGA 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI ++ L L RHATSK+ L DD I + GFRGEALASIS VS L +I+K +
Sbjct: 62 GIPKEELELALSRHATSKISTL---DDLEAIHSLGFRGEALASISSVSRLRLISKPADQE 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ ++ +G + + + ++ GTTV +DLF+N P RRK++++ + H + + +
Sbjct: 119 DAWQAWCEG-RDMQVTLEPASHPNGTTVDVQDLFFNTPARRKFLRTEKTEFGH-IDEVIR 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSF-GIEDFSFLDEV-------NA 233
RIAL PKV I + +LL S+ ++S I F DE A
Sbjct: 177 RIALACPKVD---IQLSHNQQLLRHYPSADTEHKVLSRLRQIAGKRFADEALYIEFVPEA 233
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+ L I G+I+ P QY+Y+N R + KLLNH +A
Sbjct: 234 DAHPLAIRGWIAPPDACRHQTDVQYMYVNGRMMKD----KLLNHAVR--------QAYGD 281
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
L R + Y+L + P + D+ P K V F+ V F+ +R A
Sbjct: 282 SLGNDRQAT-----YILYITLPANDVDVNVHPAKHEVRFQQARQVHDFVLMQLRQA 332
>gi|294779166|ref|ZP_06744576.1| DNA mismatch repair protein, C-terminal domain protein
[Enterococcus faecalis PC1.1]
gi|294453799|gb|EFG22191.1| DNA mismatch repair protein, C-terminal domain protein
[Enterococcus faecalis PC1.1]
Length = 710
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|256761016|ref|ZP_05501596.1| DNA mismatch repair protein mutL [Enterococcus faecalis T3]
gi|256962999|ref|ZP_05567170.1| MutL [Enterococcus faecalis HIP11704]
gi|307273664|ref|ZP_07554892.1| DNA mismatch repair protein [Enterococcus faecalis TX0855]
gi|256682267|gb|EEU21962.1| DNA mismatch repair protein mutL [Enterococcus faecalis T3]
gi|256953495|gb|EEU70127.1| MutL [Enterococcus faecalis HIP11704]
gi|306509677|gb|EFM78719.1| DNA mismatch repair protein [Enterococcus faecalis TX0855]
Length = 710
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|358063955|ref|ZP_09150551.1| hypothetical protein HMPREF9473_02614 [Clostridium hathewayi
WAL-18680]
gi|356697824|gb|EHI59388.1| hypothetical protein HMPREF9473_02614 [Clostridium hathewayi
WAL-18680]
Length = 740
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 167/354 (47%), Gaps = 26/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I L E N + +G V+ VV+EL+ N++DA AT V V + ++V D+
Sbjct: 1 MPRITVLDEHTINKIAAGEVIERPASVVKELLENAIDAQATAVTVEIRDGGTSLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI +D + L HATSK+ ++D + + GFRGEALASI+ V+ +E+I+K
Sbjct: 61 GCGIPKDEVGLAFLPHATSKI---KSVEDLFTVASLGFRGEALASIAAVAQVELISKTAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R ++G K I++ GTT + R+LFYN P R+ +++++ + + V
Sbjct: 118 ALTGTRYQIEGGK--EKSIEEIGAPEGTTFLVRNLFYNTPARKNFLKTAQTEGAY-VADL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V +IAL HP +S +FI ++ L T + + ++ + FG E + L V L+
Sbjct: 175 VEKIALSHPDISIRFI--QNNQNKLHTSGNHNLKDIIYTVFGREIAANLLPVEVKQDILQ 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I G+ P + + ++ YIN RY+ + K + F +
Sbjct: 233 IRGFAGKPVIARGNRNYENYYINGRYIKSNVVAKAIEEAYKPFMMQHKY----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P LL+L D+ P K + F++ E + I +A+ A K
Sbjct: 282 ------PFTLLHLTIEPEYLDVNVHPTKMELRFREGERIYRMIYQAVSDALAHK 329
>gi|209966848|ref|YP_002299763.1| DNA mismatch repair protein MutL [Rhodospirillum centenum SW]
gi|209960314|gb|ACJ00951.1| DNA mismatch repair protein MutL, putative [Rhodospirillum centenum
SW]
Length = 617
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 164/357 (45%), Gaps = 30/357 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M T+ RLPE + N + +G V+ V+ELV N++DAGA+++ V + + V DD
Sbjct: 1 MPTLRRLPERLVNRIAAGEVVERPAAAVKELVENALDAGASRIEVVLRDGGKALIGVADD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + L L ERHATSKL DD T I T GFRGEAL SI VS L I ++ G
Sbjct: 61 GCGMAPEELELAVERHATSKLPD----DDLTHIRTLGFRGEALPSIGAVSRLSITSRPRG 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ + +++G + +GT + RDLFY P R K+++ + + H+ +
Sbjct: 117 ADSAHAILVEGGA--KGPVMPAAGGIGTRIEVRDLFYATPARLKFLKGNRTESEHA-RDA 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSS----SPLALLISSFGIEDFSFLDEVNAND 235
V R+A+ HP V+F D E L ++ + L L + G E V+A
Sbjct: 174 VERLAMAHPHVTFLLTD-EGRTPLRLPAATGDLMEARLVRLGAVLGREFQENALPVDAAR 232
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
G + + G+I P + A QY+++N R V + + A F D
Sbjct: 233 GPVRLVGHIGLPTLNRPTAAGQYLFVNGRPVKDRLLVGAVRGAYADFLARDRH------- 285
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L L P D+ P KT V F+D V I A++ A +
Sbjct: 286 ----------PMLALFLELPPEEVDVNVHPAKTEVRFRDQALVRGLIVGALKHALAQ 332
Score = 50.1 bits (118), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 32/183 (17%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI------GYQLLQNFAE 1238
+ ++DQHAA ER+ E ++H +L+G K Q L++PE+ + L A
Sbjct: 447 IVIVDQHAAHERLVYERMKHDLLAGGVK-------RQGLLIPEVVELDPADAERLGERAA 499
Query: 1239 QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL--EFLQQL 1296
++ + G + G + + VP + G +DV L + +L
Sbjct: 500 ELAELGLVLEPFGTGC----------------VVVREVPALLGAR-ADVRGLVRDLADEL 542
Query: 1297 ADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT 1356
A+ + + V + AC G++ G + E ++ +++ T QC HGRPT
Sbjct: 543 AELGDALALKERLEAVCSRMACHGSVRAGRPMNADEMNALLRQMEATPHSGQCNHGRPTY 602
Query: 1357 VPL 1359
V L
Sbjct: 603 VEL 605
>gi|312902027|ref|ZP_07761289.1| DNA mismatch repair protein [Enterococcus faecalis TX0470]
gi|311290963|gb|EFQ69519.1| DNA mismatch repair protein [Enterococcus faecalis TX0470]
Length = 710
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|390453603|ref|ZP_10239131.1| DNA mismatch repair protein mutL [Paenibacillus peoriae KCTC 3763]
Length = 739
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 170/355 (47%), Gaps = 26/355 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I L E + N + +G V+ + VV+ELV N++DAG T+V V V ++V D+
Sbjct: 1 MSKIRVLDEHIANQIAAGEVVERPSSVVKELVENAIDAGGTRVDVSVEEGGLQSIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI + + RHATSK+GH D+ T + GFRGEAL SI+ VS +E++T A
Sbjct: 61 GSGIEPEDVETAFYRHATSKIGHGRDLFQIT---SLGFRGEALPSIAAVSKVELLTAAGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ +++G K + +D GT R+LFYN P R KYM++ ++ H +
Sbjct: 118 DGRARKLIIEGGKLMLH--EDAAARQGTDFTVRELFYNTPARLKYMKTIQTELGH-ISDV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL HP+V+F + + LL T + L ++ + +G + +
Sbjct: 175 LYRMALSHPEVAFTL--RHNGNTLLQTLGNGDLLQVIAAIYGTSAAKSMLPLEGESLDYR 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + S + +N R+V +++ L KA + L R
Sbjct: 233 ISGFVSRPEWTRSNRNAISTVVNGRFVRSYGLNQAL------------LKAYHTLLPINR 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
P ++ L SL D+ P K V F + +E +I++ +++
Sbjct: 281 -----FPLAVIQLEMHPSLVDVNVHPAKLEVRFSKEAELFQLVEDSIKAVLGQQV 330
>gi|422698553|ref|ZP_16756445.1| DNA mismatch repair protein [Enterococcus faecalis TX1346]
gi|315172873|gb|EFU16890.1| DNA mismatch repair protein [Enterococcus faecalis TX1346]
Length = 710
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|255970642|ref|ZP_05421228.1| DNA mismatch repair protein mutL [Enterococcus faecalis T1]
gi|257088270|ref|ZP_05582631.1| MutL [Enterococcus faecalis D6]
gi|307276608|ref|ZP_07557726.1| DNA mismatch repair protein [Enterococcus faecalis TX2134]
gi|312953267|ref|ZP_07772112.1| DNA mismatch repair protein [Enterococcus faecalis TX0102]
gi|384516962|ref|YP_005704267.1| DNA mismatch repair protein mutL [Enterococcus faecalis 62]
gi|422692478|ref|ZP_16750499.1| DNA mismatch repair protein [Enterococcus faecalis TX0031]
gi|422723502|ref|ZP_16780037.1| DNA mismatch repair protein [Enterococcus faecalis TX2137]
gi|255961660|gb|EET94136.1| DNA mismatch repair protein mutL [Enterococcus faecalis T1]
gi|256996300|gb|EEU83602.1| MutL [Enterococcus faecalis D6]
gi|306506718|gb|EFM75870.1| DNA mismatch repair protein [Enterococcus faecalis TX2134]
gi|310628804|gb|EFQ12087.1| DNA mismatch repair protein [Enterococcus faecalis TX0102]
gi|315026535|gb|EFT38467.1| DNA mismatch repair protein [Enterococcus faecalis TX2137]
gi|315152837|gb|EFT96853.1| DNA mismatch repair protein [Enterococcus faecalis TX0031]
gi|323479095|gb|ADX78534.1| DNA mismatch repair protein mutL [Enterococcus faecalis 62]
Length = 710
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|397166355|ref|ZP_10489800.1| DNA mismatch repair protein mutL [Enterobacter radicincitans DSM
16656]
gi|396092110|gb|EJI89675.1| DNA mismatch repair protein mutL [Enterobacter radicincitans DSM
16656]
Length = 619
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 176/357 (49%), Gaps = 31/357 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + + R
Sbjct: 120 AWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVIRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLD---EVNANDGAL 238
IAL V+ I++ +++ + + A G I +FL+ E+ G L
Sbjct: 178 IALARFDVT---INLNHNGKMVRQYRAVAEGAPKERRLGAICGSAFLEQALEIAWQHGDL 234
Query: 239 EISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ G+++ P + + A QY Y+N R + +L+NH A C D A+
Sbjct: 235 SLHGWVADPKSTSNAFAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGADQQ---- 285
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
PA++L L+ D+ P K V F V FI + + S +++
Sbjct: 286 --------PAFVLYLKIDPRQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL 334
>gi|384514398|ref|YP_005709491.1| DNA mismatch repair protein HexB [Enterococcus faecalis OG1RF]
gi|430361211|ref|ZP_19426551.1| DNA mismatch repair protein [Enterococcus faecalis OG1X]
gi|430372319|ref|ZP_19429706.1| DNA mismatch repair protein [Enterococcus faecalis M7]
gi|327536287|gb|AEA95121.1| DNA mismatch repair protein HexB [Enterococcus faecalis OG1RF]
gi|429512559|gb|ELA02163.1| DNA mismatch repair protein [Enterococcus faecalis OG1X]
gi|429514663|gb|ELA04200.1| DNA mismatch repair protein [Enterococcus faecalis M7]
Length = 710
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|227517231|ref|ZP_03947280.1| DNA mismatch repair protein [Enterococcus faecalis TX0104]
gi|424677415|ref|ZP_18114267.1| DNA mismatch repair protein [Enterococcus faecalis ERV103]
gi|424680969|ref|ZP_18117765.1| DNA mismatch repair protein [Enterococcus faecalis ERV116]
gi|424685218|ref|ZP_18121918.1| DNA mismatch repair protein [Enterococcus faecalis ERV129]
gi|424688663|ref|ZP_18125268.1| DNA mismatch repair protein [Enterococcus faecalis ERV25]
gi|424690636|ref|ZP_18127168.1| DNA mismatch repair protein [Enterococcus faecalis ERV31]
gi|424694371|ref|ZP_18130774.1| DNA mismatch repair protein [Enterococcus faecalis ERV37]
gi|424697901|ref|ZP_18134213.1| DNA mismatch repair protein [Enterococcus faecalis ERV41]
gi|424701455|ref|ZP_18137627.1| DNA mismatch repair protein [Enterococcus faecalis ERV62]
gi|424704594|ref|ZP_18140689.1| DNA mismatch repair protein [Enterococcus faecalis ERV63]
gi|424711723|ref|ZP_18143935.1| DNA mismatch repair protein [Enterococcus faecalis ERV65]
gi|424716501|ref|ZP_18145812.1| DNA mismatch repair protein [Enterococcus faecalis ERV68]
gi|424722017|ref|ZP_18151084.1| DNA mismatch repair protein [Enterococcus faecalis ERV72]
gi|424724665|ref|ZP_18153603.1| DNA mismatch repair protein [Enterococcus faecalis ERV73]
gi|424727626|ref|ZP_18156255.1| DNA mismatch repair protein [Enterococcus faecalis ERV81]
gi|424744429|ref|ZP_18172723.1| DNA mismatch repair protein [Enterococcus faecalis ERV85]
gi|424753843|ref|ZP_18181772.1| DNA mismatch repair protein [Enterococcus faecalis ERV93]
gi|227075328|gb|EEI13291.1| DNA mismatch repair protein [Enterococcus faecalis TX0104]
gi|402352356|gb|EJU87207.1| DNA mismatch repair protein [Enterococcus faecalis ERV116]
gi|402354447|gb|EJU89254.1| DNA mismatch repair protein [Enterococcus faecalis ERV103]
gi|402359199|gb|EJU93841.1| DNA mismatch repair protein [Enterococcus faecalis ERV129]
gi|402360005|gb|EJU94620.1| DNA mismatch repair protein [Enterococcus faecalis ERV25]
gi|402363663|gb|EJU98129.1| DNA mismatch repair protein [Enterococcus faecalis ERV31]
gi|402370865|gb|EJV05052.1| DNA mismatch repair protein [Enterococcus faecalis ERV37]
gi|402371486|gb|EJV05643.1| DNA mismatch repair protein [Enterococcus faecalis ERV62]
gi|402374286|gb|EJV08318.1| DNA mismatch repair protein [Enterococcus faecalis ERV41]
gi|402381616|gb|EJV15319.1| DNA mismatch repair protein [Enterococcus faecalis ERV63]
gi|402382933|gb|EJV16559.1| DNA mismatch repair protein [Enterococcus faecalis ERV65]
gi|402387908|gb|EJV21365.1| DNA mismatch repair protein [Enterococcus faecalis ERV68]
gi|402389931|gb|EJV23306.1| DNA mismatch repair protein [Enterococcus faecalis ERV72]
gi|402394085|gb|EJV27281.1| DNA mismatch repair protein [Enterococcus faecalis ERV73]
gi|402396096|gb|EJV29170.1| DNA mismatch repair protein [Enterococcus faecalis ERV81]
gi|402398964|gb|EJV31866.1| DNA mismatch repair protein [Enterococcus faecalis ERV85]
gi|402403512|gb|EJV36178.1| DNA mismatch repair protein [Enterococcus faecalis ERV93]
Length = 710
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|256960506|ref|ZP_05564677.1| MutL [Enterococcus faecalis Merz96]
gi|293385299|ref|ZP_06631115.1| DNA mismatch repair protein HexB [Enterococcus faecalis R712]
gi|293389688|ref|ZP_06634132.1| DNA mismatch repair protein HexB [Enterococcus faecalis S613]
gi|312906650|ref|ZP_07765650.1| DNA mismatch repair protein [Enterococcus faecalis DAPTO 512]
gi|312910890|ref|ZP_07769725.1| DNA mismatch repair protein, C-terminal domain protein
[Enterococcus faecalis DAPTO 516]
gi|256951002|gb|EEU67634.1| MutL [Enterococcus faecalis Merz96]
gi|291077499|gb|EFE14863.1| DNA mismatch repair protein HexB [Enterococcus faecalis R712]
gi|291080935|gb|EFE17898.1| DNA mismatch repair protein HexB [Enterococcus faecalis S613]
gi|310627298|gb|EFQ10581.1| DNA mismatch repair protein [Enterococcus faecalis DAPTO 512]
gi|311288758|gb|EFQ67314.1| DNA mismatch repair protein, C-terminal domain protein
[Enterococcus faecalis DAPTO 516]
Length = 710
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|238927478|ref|ZP_04659238.1| DNA mismatch repair protein MutL [Selenomonas flueggei ATCC 43531]
gi|238884760|gb|EEQ48398.1| DNA mismatch repair protein MutL [Selenomonas flueggei ATCC 43531]
Length = 622
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 174/353 (49%), Gaps = 30/353 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L +A N + +G V+ VV+ELV N++DAGAT V V + G +++V D+
Sbjct: 1 MTRIHVLDDATINKIAAGEVVERPASVVKELVENAMDAGATAVEVEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + RHATSK+ +D++ I T GFRGEAL +I+ VS ++T+
Sbjct: 61 GRGMTGEDARAAILRHATSKIAAASDLET---IATLGFRGEALPTIASVSHFSLLTRQAA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G I+D VGT+V DLF+N P R+K+++++ + +
Sbjct: 118 DDLGTRVDISGGGTPM--IEDAGCAVGTSVRVEDLFFNTPARKKFLKTNATEA-GKISDY 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGA- 237
V+R+AL P ++F+FI+ + + + LA I S +G + S L ++ D A
Sbjct: 175 VIRLALSRPDIAFRFIN---NNRMTIMTAGDGDLARTIGSIYGGDAASALIPLDFYDDAA 231
Query: 238 -LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ I+GYIS P S +A+Q +N R + I K ++++ S GF
Sbjct: 232 DIRITGYISKPSLIRSSRAWQTYIVNGRTIQNRAIAKAIDNV------YRSLVPKMGF-- 283
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P ++ + P D+ P KT + F+D + + +A+ A
Sbjct: 284 ---------PLAVIVITVPQRTIDVNVHPQKTEMKFEDEGRIFKAVYKAVLDA 327
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 79/204 (38%), Gaps = 50/204 (24%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1215
+ QVD +I + TL +IDQHAA ERI + L H +LS +
Sbjct: 436 IGQVDLTYIIAQSTATLYIIDQHAAHERILFDRFSAQTDGIPSQQMLVHAILSFDAHEAQ 495
Query: 1216 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
Y++ EL +G+ L G R++ L
Sbjct: 496 YIEENAEL-FDRLGFHL-----------------EAAGERTYR--------------LTE 523
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKACRGAIMFGDSLLPSEC 1333
P ++ + E L L D T P+ LR + + ACR AI G+ L +
Sbjct: 524 TPADVPTEEAEGIIREILASLGDL---HTATPANLREAGIATMACRAAIKAGEELSIRQM 580
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTV 1357
+++ EL+ T F C HGRPT +
Sbjct: 581 EILLAELRATPFPFTCPHGRPTIL 604
>gi|424673544|ref|ZP_18110485.1| DNA mismatch repair protein [Enterococcus faecalis 599]
gi|402352227|gb|EJU87080.1| DNA mismatch repair protein [Enterococcus faecalis 599]
Length = 710
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|422736092|ref|ZP_16792357.1| DNA mismatch repair protein [Enterococcus faecalis TX1341]
gi|315167037|gb|EFU11054.1| DNA mismatch repair protein [Enterococcus faecalis TX1341]
Length = 710
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|406672777|ref|ZP_11080002.1| DNA mismatch repair protein MutL [Bergeyella zoohelcum CCUG 30536]
gi|405587321|gb|EKB61049.1| DNA mismatch repair protein MutL [Bergeyella zoohelcum CCUG 30536]
Length = 593
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 191/389 (49%), Gaps = 33/389 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ +V+EL+ N++DAGATKV + V V+VVD+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASIVKELMENAIDAGATKVELIVREAGRNLVQVVDNGIG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK + +D I + GFRGEALASI+ VS +E+ TK
Sbjct: 65 MSETDARMAFERHATSK---IRTTEDIFKIMSKGFRGEALASIAAVSQVELKTKKQDADI 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++G + + + GT++ ++LFYN P RRK+++++ + H + + R
Sbjct: 122 GTNIYIEGGMLQFQ--EPIQTTTGTSIAVKNLFYNVPARRKFLKNNNVEFRHILDEFQ-R 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL H ++ F D+ D + S L ++ FG + L + + G +++ G
Sbjct: 179 VALAHEQIEF---DLFHNDAPIFRLRKGSSLQRIVDIFGRKLQPLLIPLKEDLGWIKLQG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+++ P + + Q+ ++N R+ ++K + +A G L
Sbjct: 236 FVAKPEGAKKTRGEQFFFVNGRFFKSPYLNKAVQ------------EAFEGLL-----MP 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-RSAWMKKIAHDSFDV 361
P++ L L D+ P KT + F+D + A I I RS + IA S D
Sbjct: 279 GYTPSFFLFLETEPEKIDVNVHPQKTEIKFEDEHLIFALIRSTIKRSLGIYNIA-PSLDF 337
Query: 362 DMLED-AELPLESSRFQSHQSSTHLHSSP 389
D D E+ ++SS+ S+ SS + H++P
Sbjct: 338 DRNPDFEEMIIQSSK--SNASSGN-HTAP 363
>gi|257420393|ref|ZP_05597383.1| DNA mismatch repair protein hexB [Enterococcus faecalis X98]
gi|422708063|ref|ZP_16765597.1| DNA mismatch repair protein [Enterococcus faecalis TX0043]
gi|257162217|gb|EEU92177.1| DNA mismatch repair protein hexB [Enterococcus faecalis X98]
gi|315154584|gb|EFT98600.1| DNA mismatch repair protein [Enterococcus faecalis TX0043]
Length = 710
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|313893442|ref|ZP_07827014.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
sp. oral taxon 158 str. F0412]
gi|313442083|gb|EFR60503.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
sp. oral taxon 158 str. F0412]
Length = 676
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 170/355 (47%), Gaps = 34/355 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M TI+ L E N + +G V+ V++EL+ NS+DA AT + V +G Y+++ D+
Sbjct: 1 MATIHVLDETTINKIAAGEVVERPASVIKELIENSIDASATNIEVEIGDGGVAYMRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + L RHATSK+ + D+ D I + GFRGEALASI+ VS + T+
Sbjct: 61 GIGMTEEDARLAILRHATSKIQQVEDLFD---IASLGFRGEALASIASVSHFSLTTRKAD 117
Query: 120 RPNGYRKVMKG---SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G R + G + C+ G GTT+ RDLFYN P RRK+++S + +
Sbjct: 118 SDLGTRITVDGGTFTDCIPYG-----AAPGTTIEIRDLFYNTPARRKFLKSE-RTESSKI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAND 235
+ V ++AL +P +SFK I +D + + + +++ +G + + V
Sbjct: 172 QDIVGKLALSNPHISFKLI---VDDRVAIITPGNGNIGDTVAALYGYKTKDDIFTVAYES 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
++ I G +S P S + +Q + +N+R + I K ++ + + NG
Sbjct: 229 DSIYIDGVVSKPTLLKSTRIWQTIIVNNRVISDKTIMKAID------NAYHALLPKNGH- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
P +LN+ P + D+ P K+ V F D + + + I +A
Sbjct: 282 ----------PLVVLNITVPAGMVDINVHPRKSEVKFSDDKIIFKAVYHGILNAL 326
Score = 47.8 bits (112), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 26/192 (13%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI 1228
+ QV +I G L +IDQHAA ER+R ++L S E + + Q +
Sbjct: 494 MGQVASCYILAKKGDDLYIIDQHAAHERVRYDKL---CKSSESIPMQSILVPQYSEATDD 550
Query: 1229 GYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVD 1288
L++ E + D G+ ++ G T I L+ P V+L +
Sbjct: 551 EMNLVEEERETLLDLGF--DVELGGP--------------TKIKLVGAP----VDLVESK 590
Query: 1289 LLEFLQQLADTDGSSTTPPSV-LR--VLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
E LQ + P LR +L +CRGAI G +L + ++E+L T
Sbjct: 591 AFEILQYVFSYLHEHQQPTKAQLRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEK 650
Query: 1346 CFQCAHGRPTTV 1357
+ C HGRPT +
Sbjct: 651 PYVCPHGRPTII 662
>gi|256618084|ref|ZP_05474930.1| MutL [Enterococcus faecalis ATCC 4200]
gi|422720898|ref|ZP_16777505.1| DNA mismatch repair protein [Enterococcus faecalis TX0017]
gi|256597611|gb|EEU16787.1| MutL [Enterococcus faecalis ATCC 4200]
gi|315031847|gb|EFT43779.1| DNA mismatch repair protein [Enterococcus faecalis TX0017]
Length = 710
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|164685701|ref|ZP_01946749.2| DNA mismatch repair protein MutL [Coxiella burnetii 'MSU Goat
Q177']
gi|164601208|gb|EAX32616.2| DNA mismatch repair protein MutL [Coxiella burnetii 'MSU Goat
Q177']
Length = 574
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 172/366 (46%), Gaps = 44/366 (12%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I RL + N + +G V+ VV+EL+ NS+DA A+ + V + +++ DDG G
Sbjct: 3 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + LVL ERHATSK +A +DD I T GFRGEAL+SIS VS L + ++
Sbjct: 63 IHPEDLVLALERHATSK---IAKIDDLQDITTLGFRGEALSSISAVSRLTLTSRQKNAEM 119
Query: 123 GYR------KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
GYR K+M + GTT+ +DLFYN P RRK+++ SP +
Sbjct: 120 GYRISNISHKIMTPVPAAH--------PQGTTIDVQDLFYNTPARRKFLR-SPATEFQHI 170
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELL---CTCSSSSPLALLISSFGIEDFSFLDEVNA 233
++ + R+AL H + +F+ +E E++ + S + S G +
Sbjct: 171 RRIIERLALSH--FTTEFLLHHNEKEIIHFKPATTISGQENRIKSILGDVFMQSALAIEF 228
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNG 293
+ L + GYI+ + S QY+Y+N R+V I + L A D
Sbjct: 229 SQSGLTLKGYIAEAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQ--AYHDV--------- 277
Query: 294 FLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
G+ PAY+L L + D+ P K V F+D + V F+ A+++A +
Sbjct: 278 LFHGRH------PAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIHAVKTALAQA 331
Query: 354 ---IAH 356
IAH
Sbjct: 332 KPGIAH 337
>gi|260599482|ref|YP_003212053.1| DNA mismatch repair protein [Cronobacter turicensis z3032]
gi|260218659|emb|CBA33989.1| DNA mismatch repair protein mutL [Cronobacter turicensis z3032]
Length = 634
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 173/359 (48%), Gaps = 31/359 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGGG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQHE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GALE 239
IAL V+ ++P + S I +FL++ A + G L
Sbjct: 178 IALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEQALAIEWQHGDLA 235
Query: 240 ISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 236 LHGWVAEPKATTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQQ----- 285
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 286 -------PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAAN 336
>gi|395240976|ref|ZP_10417998.1| DNA mismatch repair protein mutL [Lactobacillus gigeriorum CRBIP
24.85]
gi|394475484|emb|CCI87975.1| DNA mismatch repair protein mutL [Lactobacillus gigeriorum CRBIP
24.85]
Length = 630
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 175/365 (47%), Gaps = 37/365 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+EL+ NS+DAGA+++ F G+ V+
Sbjct: 1 MAKIHELSETLTNQIAAGEVIERPASVVKELIENSIDAGASRIRIDFTEAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+GSGI D + L RHATSK+ + D+ + T GFRGEALASI+ VS +EI+T+A
Sbjct: 59 DNGSGIEADQIDLAFMRHATSKINNERDL---FRVATLGFRGEALASIAAVSQVEILTRA 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G + G K L +D GT ++ +LF+N P R KY++ SP+ + +
Sbjct: 116 SGVKGTRAEFSGGQKKLQ---EDAAAQKGTQIIVNNLFFNTPARLKYLR-SPRTEMTKII 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
V R+AL + K++F + + L T + + + + +G + + +
Sbjct: 172 DIVNRVALGYSKIAFTLTN--NGKVLFRTAGNGNLQQTVANIYGRPVAEKMLPIKMENAD 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+I+G IS P + S + F + +N RY+ +++ N + G
Sbjct: 230 FKINGLISRPELTRSTRNFISILLNGRYIR-------------------NYQLNAAIMDG 270
Query: 298 KRSK--SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
+K S+ P ++ ++ L D+ P K V + + I +AI A M+K
Sbjct: 271 YANKMDSRHYPVAVIAIKVDPFLVDVNVHPTKQEVRLSKEKELGRLISQAISEAIMEK-- 328
Query: 356 HDSFD 360
DS +
Sbjct: 329 QDSLN 333
>gi|257083164|ref|ZP_05577525.1| DNA mismatch repair protein [Enterococcus faecalis Fly1]
gi|256991194|gb|EEU78496.1| DNA mismatch repair protein [Enterococcus faecalis Fly1]
Length = 710
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|71280731|ref|YP_267089.1| DNA mismatch repair protein MutL [Colwellia psychrerythraea 34H]
gi|123733831|sp|Q48A24.1|MUTL_COLP3 RecName: Full=DNA mismatch repair protein MutL
gi|71146471|gb|AAZ26944.1| DNA mismatch repair protein MutL [Colwellia psychrerythraea 34H]
Length = 652
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 167/355 (47%), Gaps = 24/355 (6%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGS 61
TI LP + N + +G V+ V++EL+ NS+DAGAT + + V +K+ D+G
Sbjct: 2 TIAILPARLANQIAAGEVVERPASVIKELIENSLDAGATSIHIDVDKGGIKKIKITDNGH 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI ++ L L RHATSK+ L D++ IG+ GFRGEALASIS V+ L + +K +
Sbjct: 62 GIVKEELTLALSRHATSKIKSLNDLE---AIGSLGFRGEALASISSVARLTLTSKPQSQA 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ V +G + + + I GT++ DLF+N P RRK++++ + H + + V
Sbjct: 119 TAWQAVAEG-RDMSVNIKPAAHPDGTSIEVLDLFFNTPARRKFLRTEKTEFNH-IDEVVR 176
Query: 182 RIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
RIAL H +VSF + + + + + + + G + EV+ + +
Sbjct: 177 RIALAHFEVSFSLTHNGNTVRQYRMASTHAQCIKRVAMVCGPKFIEHAVEVDCPHDNMTL 236
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SG+++ P S S Y Y+N R + I+ + A D++
Sbjct: 237 SGWLAKPSFSRSQNDLCYSYVNGRMMRDKLINHAIRQAYADLLPPDTY------------ 284
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
PA++L L+ H D+ P K V F V FI A +A
Sbjct: 285 -----PAFVLFLQLDHREVDVNVHPSKHEVRFHQSRYVHDFIYSVCHKALTSALA 334
>gi|424759107|ref|ZP_18186780.1| DNA mismatch repair protein [Enterococcus faecalis R508]
gi|402405079|gb|EJV37680.1| DNA mismatch repair protein [Enterococcus faecalis R508]
Length = 710
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQAIQ 323
>gi|374600020|ref|ZP_09673022.1| DNA mismatch repair protein MutL [Myroides odoratus DSM 2801]
gi|423325183|ref|ZP_17303024.1| DNA mismatch repair protein mutL [Myroides odoratimimus CIP 103059]
gi|373911490|gb|EHQ43339.1| DNA mismatch repair protein MutL [Myroides odoratus DSM 2801]
gi|404607192|gb|EKB06726.1| DNA mismatch repair protein mutL [Myroides odoratimimus CIP 103059]
Length = 708
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 186/395 (47%), Gaps = 35/395 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDA AT++ V ++V+D+G G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPASVVKELIENAVDAEATEIKLVLKEAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ + ERHATSK+ + +D + T GFRGEALASI+ ++ +++ T H
Sbjct: 65 MNETDARMAFERHATSKI---SKAEDLFALNTKGFRGEALASIAAIAHVDLKTCLHNSEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G V++GSK + + GT ++LF+N P RR +++S + L ++ R
Sbjct: 122 GTHLVIEGSKVMAQEV--AVTPPGTVFSVKNLFFNIPARRNFLKSDNVE-LRNIVDEFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I LVHP +SF I SE + SS+ +++ FG L + + I G
Sbjct: 179 ITLVHPGISFTMIHNGSE---VFNLPSSNLRQRIVNVFGTRTNEKLVPIEEITEIVTIRG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+I P + + Q+ ++N R++ G +H + + A+++ G L K
Sbjct: 236 FIGKPEFAKKSRGEQFFFVNDRFIRSGYLH---HSVLAAYE---------GLL-----KD 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P Y + L P D+ P KT + F D + + + + +I+ + + D
Sbjct: 279 GTQPTYFIYLSVPPDSIDINIHPTKTEIKFDDEQALYSILRSSIKHSLGQFNVAPVLDFH 338
Query: 363 MLEDAELPLESSRFQSHQSSTHL-----HSSPLKN 392
E ++P E F+ ++ T L H +P N
Sbjct: 339 RDEGLDVPYE---FKDREAETPLIEIDTHYNPFSN 370
>gi|423126980|ref|ZP_17114659.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5250]
gi|376395839|gb|EHT08484.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5250]
Length = 626
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 182/374 (48%), Gaps = 38/374 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVARLTLTSRTEDQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEIVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDEVNAND---GAL 238
IAL V+ I++ +++ + S G I FL+ A + G L
Sbjct: 178 IALARFDVT---INLSHNGKVVRQYRAVSQDGQRERRLGAICGIPFLEHALAIEWQHGDL 234
Query: 239 EISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+SG+++ P + + ++ QY Y+N R + +L+NH A C D A+
Sbjct: 235 TLSGWVADPLHTNPTLAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGADQQ---- 285
Query: 298 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
PA++L L+ PH + D+ P K V F V FI + + S +
Sbjct: 286 --------PAFVLYLKIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVLS-----VLQ 331
Query: 357 DSFDVDMLEDAELP 370
DV + E+ + P
Sbjct: 332 QQLDVPLAEEGDEP 345
>gi|449896270|ref|ZP_21789563.1| DNA mismatch repair protein [Streptococcus mutans R221]
gi|450046199|ref|ZP_21838821.1| DNA mismatch repair protein [Streptococcus mutans N34]
gi|449199231|gb|EMC00309.1| DNA mismatch repair protein [Streptococcus mutans N34]
gi|449262453|gb|EMC59902.1| DNA mismatch repair protein [Streptococcus mutans R221]
Length = 651
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 166/352 (47%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V+D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|429101920|ref|ZP_19163894.1| DNA mismatch repair protein MutL [Cronobacter turicensis 564]
gi|426288569|emb|CCJ90007.1| DNA mismatch repair protein MutL [Cronobacter turicensis 564]
Length = 639
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 173/359 (48%), Gaps = 31/359 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGGG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GALE 239
IAL V+ ++P + S I +FL++ A + G L
Sbjct: 178 IALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEQALAIEWQHGDLA 235
Query: 240 ISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 236 LRGWVAEPKATTAALAEVQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQQ----- 285
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 286 -------PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAAN 336
>gi|421532886|ref|ZP_15979229.1| DNA mismatch repair protein [Streptococcus agalactiae STIR-CD-17]
gi|403641844|gb|EJZ02756.1| DNA mismatch repair protein [Streptococcus agalactiae STIR-CD-17]
Length = 657
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 169/354 (47%), Gaps = 40/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 1 MSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + VL RHATSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 61 GEGMTSEDAVLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATEQ 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++ H
Sbjct: 118 GKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ V R++L HP+V+F I+ E+ T S + +G+ + E++
Sbjct: 171 II-DIVNRLSLAHPEVAFTLIN--DGKEMTKTSGISDLRQAIAGIYGLNTAKKMIEISNA 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 228 DLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRSI 268
Query: 295 LKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 269 LDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISSAI 322
>gi|253996214|ref|YP_003048278.1| DNA mismatch repair protein MutL [Methylotenera mobilis JLW8]
gi|253982893|gb|ACT47751.1| DNA mismatch repair protein MutL [Methylotenera mobilis JLW8]
Length = 610
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 175/352 (49%), Gaps = 31/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M TI LP+ + + + +G V+ ++EL+ NS+DAG+T + V + G+ ++V
Sbjct: 1 MATIRLLPDQLISQIAAGEVVERPASALKELLENSLDAGSTDIQVSLLQGGIKQ--MRVT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+G++++ L+L RHATSK+ L D++ + + GFRGEALASI+ +S +++++
Sbjct: 59 DNGAGVAKEDLMLALTRHATSKISSLEDLES---VASLGFRGEALASIASISRTQLLSRQ 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G + +R +GS+ I+ D GT + DL++N P RRK++++ + H +
Sbjct: 116 SGSKHAWRIGSEGSEVST--IEPAALDAGTVIEVSDLYFNTPARRKFLKTEATEFGH-CE 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ RIAL P VS ++ L + P G E + V+ +
Sbjct: 173 EMFTRIALSRPDVSLM---LQHNGRALSRFAIGQPERRFSEVLGSEFVAESIPVDESAAG 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
L + G + P + + + QYVY+N R+V K++ H +A L
Sbjct: 230 LRLWGMAAKPTFNRNSRDTQYVYVNGRFVRD----KVIAHAI--------RQAYQDVLHH 277
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
R PA++L L SL D+ P KT V F+D + V FI A+ A
Sbjct: 278 DRH-----PAFVLFLELDPSLVDVNVHPAKTEVRFRDSQAVHRFIFHALHKA 324
Score = 44.7 bits (104), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L VID HAA ERI E+L+H + + ++V Q L+LP + + D
Sbjct: 436 LVVIDMHAAHERIMYEKLKHAL---DSQTVQM----QPLLLP-VSFN---------ADKL 478
Query: 1245 WICNIH--TQGSRSFNKNL--NLLQRQITVITLLAVPCIFGVNLSDVDLL----EFLQQL 1296
+ +H G+++ + L ++ T + + AVP + L D D + + L+ L
Sbjct: 479 EVATVHEALAGNQATLQQLGFDIAILSPTTLAVRAVPTM----LQDADAVILARDVLRDL 534
Query: 1297 ADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1355
+ S +L + AC A+ SL E ++ +++ T QC HGRPT
Sbjct: 535 REYGASRVLTERRNELLGTMACHAAVRANRSLTIPEMNALLRDMEATERSGQCNHGRPT 593
>gi|449973524|ref|ZP_21814764.1| DNA mismatch repair protein [Streptococcus mutans 11VS1]
gi|450106966|ref|ZP_21860779.1| DNA mismatch repair protein [Streptococcus mutans SF14]
gi|449179453|gb|EMB81664.1| DNA mismatch repair protein [Streptococcus mutans 11VS1]
gi|449222659|gb|EMC22378.1| DNA mismatch repair protein [Streptococcus mutans SF14]
Length = 651
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 166/352 (47%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V+D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|311281278|ref|YP_003943509.1| DNA mismatch repair protein MutL [Enterobacter cloacae SCF1]
gi|308750473|gb|ADO50225.1| DNA mismatch repair protein MutL [Enterobacter cloacae SCF1]
Length = 623
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 178/381 (46%), Gaps = 40/381 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I ++ L L RHATSK+ A +DD I + GFRGEALASIS VS L + ++ +P
Sbjct: 63 IRQEELALALARHATSKI---ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQPE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMDVTVRPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
IAL V+ + ++ + L + G+ + G L +
Sbjct: 178 IALARFDVTINLNHNGKAVRQYRAVPEGGQKERRLGAICGVPFVEHALAIEWQHGDLALR 237
Query: 242 GYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
G+++ P Y + + QY Y+N R + +L+NH A C D A
Sbjct: 238 GWVADPQYTTAQLAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGAGEQ------- 285
Query: 301 KSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
PA++L L PH + D+ P K V F V FI + + S +++
Sbjct: 286 -----PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQV----- 334
Query: 360 DVDMLEDAELPL--ESSRFQS 378
DA LPL ES QS
Sbjct: 335 ------DAPLPLARESDDAQS 349
>gi|269797933|ref|YP_003311833.1| DNA mismatch repair protein MutL [Veillonella parvula DSM 2008]
gi|269094562|gb|ACZ24553.1| DNA mismatch repair protein MutL [Veillonella parvula DSM 2008]
Length = 681
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 172/355 (48%), Gaps = 34/355 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M TI+ L E N + +G V+ V++EL+ NS+DA AT + V +G Y+++ D+
Sbjct: 1 MATIHVLDETTINKIAAGEVVERPASVIKELIENSIDASATNIEVEIGEGGVAYMRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + L RHATSK+ + D+ D I + GFRGEALASI+ VS +IT+
Sbjct: 61 GIGMTEEDARLAILRHATSKIQQVEDLFD---IASLGFRGEALASIASVSHFSLITRKAD 117
Query: 120 RPNGYRKVMKG---SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G R + G + C+ G GTT+ +DLFYN P RRK++++ + +
Sbjct: 118 SDLGTRITVDGGIFTDCIPYG-----AAPGTTIEIKDLFYNTPARRKFLKTERTEA-SKI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAND 235
+ V ++AL +P +SFK I +D + + ++ +++ +G + + V
Sbjct: 172 QDIVGKLALSNPHISFKLI---IDDRVAIITPGNGDISDTVAALYGYKTKDDIFTVAYES 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
++ I G +S P S + +Q + +N+R + I K ++ + + NG
Sbjct: 229 DSIYIDGVVSKPTLLKSTRIWQTIIVNNRVISDKTIMKAID------NAYHALLPKNGH- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
P +LN+ P + D+ P K+ V F D + + + I +A
Sbjct: 282 ----------PLVVLNITVPARMVDINVHPRKSEVKFSDDKIIFKAVYHGILNAL 326
Score = 47.0 bits (110), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 38/198 (19%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI 1228
+ QV +I G L +IDQHAA ER+R ++L +S+ Q +++P+
Sbjct: 499 MGQVASCYILAKKGDDLYIIDQHAAHERVRYDKL-----CKSSESIPM----QSILVPQY 549
Query: 1229 G------YQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV 1282
L++ E + D G+ ++ G T I L+ P V
Sbjct: 550 NEATDDEMNLVEEEREILLDLGF--DVELGGP--------------TKIKLVGAP----V 589
Query: 1283 NLSDVDLLEFLQQLADTDGSSTTPPSV-LR--VLNSKACRGAIMFGDSLLPSECALIVEE 1339
+L + E LQ + P LR +L +CRGAI G +L + ++E+
Sbjct: 590 DLVESKAFEILQYVFSYLHDHQQPTKAQLRHEMLAYASCRGAIKAGHNLNMYQMTTLIED 649
Query: 1340 LKQTSLCFQCAHGRPTTV 1357
L T + C HGRPT +
Sbjct: 650 LFSTEKPYVCPHGRPTII 667
>gi|449893956|ref|ZP_21789011.1| DNA mismatch repair protein [Streptococcus mutans SF12]
gi|449255573|gb|EMC53421.1| DNA mismatch repair protein [Streptococcus mutans SF12]
Length = 651
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 166/352 (47%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V+D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|406837073|ref|ZP_11096667.1| DNA mismatch repair protein [Lactobacillus vini DSM 20605]
Length = 648
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 179/373 (47%), Gaps = 43/373 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP + + + +G V+ VV+ELV N++DA +T++ +YV +KV+D+
Sbjct: 1 MTKIKELPAILADQIAAGEVVERPASVVKELVENAIDAQSTQIDIYVADSGLSLIKVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEAL---ASISDVSLLEIITK 116
G GI+ D L L RH+TSKL D + I T GFRGEAL AS++DV+L +T
Sbjct: 61 GQGIAADELELAFRRHSTSKLH---DKNGLFKIRTLGFRGEALPSIASVADVTLKTAMTD 117
Query: 117 AHGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G R + K + + GT V+ R LFYN P R KY++ SP+ L +
Sbjct: 118 GQGMEIEIRGGQQLDKKII------ARPQGTEVMVRSLFYNTPARLKYLK-SPQTELAVI 170
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAND 235
V R+AL HP+++ + + + +L + ++ L IS+ +G+++ + V+AND
Sbjct: 171 SDIVDRLALGHPEIA---LSLHNNKRVLLQTAGNNNLQQTISAIYGVKNAQQMLPVHAND 227
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
+ G++S P + + K + + +N RY+ +++ N +
Sbjct: 228 LDFAVEGFVSLPKLTRATKNYITLLLNGRYI-------------------RNYQLTNAVI 268
Query: 296 KGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
KG SK P ++ L+ L D+ P K V + + I+ I ++
Sbjct: 269 KGYGSKLMVGRYPMAIIALKLDPVLVDVNVHPTKQEVRISKEKQLCELIQTTI----YQR 324
Query: 354 IAHDSFDVDMLED 366
+A ++ D L D
Sbjct: 325 LATENLIPDALAD 337
>gi|251783478|ref|YP_002997783.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242392110|dbj|BAH82569.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 660
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 192/416 (46%), Gaps = 49/416 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA +++V + + +++ D+
Sbjct: 1 MTKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQVTIDIEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + L L RHATSK+ +D+ I T GFRGEAL S++ +S + I T
Sbjct: 61 GEGMSPEDLPLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSVASISKITIKTATKE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G V G + L ++ VGT + +LFYN P R KYM+S ++ H V
Sbjct: 118 DNHGSLLVAIGGEIETL--EETSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGAL 238
V R++L HP+VSF I S+ L S + L I+ +G+ + ++ D
Sbjct: 175 VNRLSLAHPEVSFTLI---SDGRQLTQTSGTGDLRQAIAGIYGLNTAKKMIAISNADLDF 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
E+SGY+S P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVSGYVSLPELTRANRNYMTILINGRYI-------------------KNFLLNRAILDGY 272
Query: 299 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
SK P +++++ L D+ P K V ++A I AI + ++
Sbjct: 273 GSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKERELMALISTAISESLKEQ--- 329
Query: 357 DSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLKNLA----KQRDHMFHKECE 406
D++ DA L S+R S T L PL++ QR+ F KE +
Sbjct: 330 -----DLIPDALENLAKSSTRHFSKPEQTQL---PLQSKGLYYDPQRNDFFVKESD 377
>gi|317493567|ref|ZP_07951988.1| DNA mismatch repair protein MutL [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918510|gb|EFV39848.1| DNA mismatch repair protein MutL [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 638
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 164/348 (47%), Gaps = 26/348 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I++D L L RHATSK + +DD I + GFRGEALAS+S VS L + ++ +
Sbjct: 63 INKDELALALARHATSK---ITSLDDLEAIMSLGFRGEALASVSSVSRLTMTSRTAEQNE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTTV DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTVKPAAHPVGTTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKF-IDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
IAL V+ + + + + L S G E+ G L I
Sbjct: 178 IALARFDVTIQLHHNGKMIRQYRAVKEDGQKDRRLGSICGTAFIQHALEIKWEHGDLAIH 237
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G+++ P S + QY Y+N R + KL+ H A D K +
Sbjct: 238 GWVAGPVGSRQLTEMQYSYVNGRMMRD----KLITH-AIRQAYQDQLKDDQQ-------- 284
Query: 302 SQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
PAY+L L PH + D+ P K V F V FI +A+ S
Sbjct: 285 ----PAYVLYLTVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVIS 327
>gi|373857377|ref|ZP_09600119.1| DNA mismatch repair protein MutL [Bacillus sp. 1NLA3E]
gi|372453027|gb|EHP26496.1| DNA mismatch repair protein MutL [Bacillus sp. 1NLA3E]
Length = 656
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 145/267 (54%), Gaps = 10/267 (3%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L + + N + +G V+ VV+ELV NS+DAG+T + + + ++++D+
Sbjct: 1 MGKIILLDDTLSNKIAAGEVVERPASVVKELVENSIDAGSTIIEIEIEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G+GI D ++L +RHATSK + D +D I T GFRGEAL SI+ V+ LE+ T + G
Sbjct: 61 GAGIEEDDVLLAFQRHATSK---IKDENDLFRIRTLGFRGEALPSIASVARLELKT-STG 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R V++G K RK GT + DLF+N P R KYM+S + L ++
Sbjct: 117 LEAGTRAVIEGGKVDTFEKSASRK--GTDITITDLFFNTPARLKYMKSIHTE-LGNITDL 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+AL HP+VSF+ ++ +LL T + +L + +G+ + ++
Sbjct: 174 VNRLALAHPEVSFRL--THNDRQLLQTNGNGDVRQVLAAIYGMNIVKNMIPISGTSLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYV 266
I GYIS P + + + + IN R++
Sbjct: 232 IKGYISMPEFTRASRNYISTMINGRFI 258
>gi|289550909|ref|YP_003471813.1| DNA mismatch repair protein MutL [Staphylococcus lugdunensis
HKU09-01]
gi|385784537|ref|YP_005760710.1| DNA mismatch repair protein MutL [Staphylococcus lugdunensis
N920143]
gi|418414210|ref|ZP_12987426.1| DNA mismatch repair protein mutL [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180441|gb|ADC87686.1| DNA mismatch repair protein MutL [Staphylococcus lugdunensis
HKU09-01]
gi|339894793|emb|CCB54089.1| DNA mismatch repair protein MutL [Staphylococcus lugdunensis
N920143]
gi|410877848|gb|EKS25740.1| DNA mismatch repair protein mutL [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 637
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 167/359 (46%), Gaps = 35/359 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
MG I L ++ N + +G V+ + VV+EL+ N++DA AT++ V V G+ + ++VV
Sbjct: 1 MGKIKELQTSLANKIAAGEVVERPSSVVKELLENAIDADATEINVEVEESGISS--IRVV 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+GSGI D L L+ RHATSK L D DD I T GFRGEALASIS V+ + +T
Sbjct: 59 DNGSGIEADDLNLVFHRHATSK---LHDDDDLFHIRTLGFRGEALASISSVAKV-TLTTC 114
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G+ + + +Y RK GT V LFYN P R KY++S + L +
Sbjct: 115 TDNEQGHEIYAENGQIVYKKPAKARK--GTDVKVESLFYNTPARLKYIKSLYTE-LGKIT 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
V R+A+ HP + F + +L T S ++ +G++ L + +
Sbjct: 172 DIVNRMAMSHPDIRFSLV--SDGKIMLQTNGSGKTNEVMADIYGMKVAKDLVHITGDTSD 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
I GY++ P S S K + ++IN RY+ ++ N ++G
Sbjct: 230 YHIEGYVAKPEHSRSNKHYISIFINGRYI-------------------KNFILNKAIVEG 270
Query: 298 KRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
+ P +N++ L D+ P K V E + I IR A+ +I
Sbjct: 271 YHTLMMIGRYPICYINIKMDPILVDVNVHPTKLEVRLSKEEQLYQLIVEKIREAFHDRI 329
>gi|302345880|ref|YP_003814233.1| DNA mismatch repair protein MutL [Prevotella melaninogenica ATCC
25845]
gi|302149101|gb|ADK95363.1| DNA mismatch repair protein MutL [Prevotella melaninogenica ATCC
25845]
Length = 630
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 31/348 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV N++DAGAT + + V ++V+DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGATHIDVLVVDAGRTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK + DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSK---IRKADDLFSLRTMGFRGEALASIAAVAQIELKTRMESEDL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + GS+ + G + VG+ + +LF+N P RRK+++S+ + L+++ R
Sbjct: 122 GTHLSIAGSR--FTGQEPCSCPVGSNFLVENLFFNVPARRKFLKSNTTE-LNNIITAFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I LV+P++SF +E L CS ++ FG L ++ + I G
Sbjct: 179 IVLVYPQISFTLHSNGTELFNLRACSYRQ---RIVEVFGKRLNQDLLPIDVDTSLCHIHG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + QY ++N RY+ HK + +FD +
Sbjct: 236 FVGKPESARKKAPHQYFFVNDRYMKHPYFHK---AVITAFD-------------RLIPQG 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAI 346
+ P Y L P D+ P KT + F++ W+ +LA ++ A+
Sbjct: 280 EQVP-YFLYFDVPAENIDVNIHPTKTEIKFENEQAIWQILLAAVKEAV 326
>gi|442610707|ref|ZP_21025417.1| DNA mismatch repair protein MutL [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441747736|emb|CCQ11479.1| DNA mismatch repair protein MutL [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 614
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 172/356 (48%), Gaps = 33/356 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
M I LP + N + +G V+ VV+ELV NS+D+GAT++ + + + +++ D+
Sbjct: 1 MALIEILPAQLANQIAAGEVVERPASVVKELVENSLDSGATRIQIDIERGGHKLIRIRDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI+++ L L RHATSKL L DD I + GFRGEALASIS VS L + +K
Sbjct: 61 GSGIAKEELTLALSRHATSKLKTL---DDLENIISLGFRGEALASISSVSRLTLSSKPQA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ ++ +G + + + + GTTV +DLF+N P RRK++++ + H + +
Sbjct: 118 QETAWQAFAEG-RDMAVQVQPTSHPDGTTVEVKDLFFNTPARRKFLRTEKTEFAH-IDEL 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG----IEDFSFLDEVNAND 235
V RIAL V+F +C SS ++ G IE SFL+ + D
Sbjct: 176 VKRIALSRFDVAFTLTHNNKVIRQYRSCGSSEANVQRVAQVGGKAFIEQASFLE--SGTD 233
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
G L + G++ S A QY Y+N R + KL+ H +++ G
Sbjct: 234 G-LHLLGWLMPIGTS---GATQYTYVNGRMMRD----KLILH-----AIRQAYEEIIG-- 278
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
+Q P+++L L D+ P K V F + FI +A+R M
Sbjct: 279 ------AQEIPSFVLYLELDPRQVDVNVHPAKHEVRFHQARLIHDFIVQAVRQVVM 328
>gi|421081712|ref|ZP_15542621.1| DNA mismatch repair protein MutL [Pectobacterium wasabiae CFBP
3304]
gi|401703525|gb|EJS93739.1| DNA mismatch repair protein MutL [Pectobacterium wasabiae CFBP
3304]
Length = 658
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 173/358 (48%), Gaps = 32/358 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDELTLALARHATSKITTL---DDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDE---VNANDGAL 238
IAL V+ I + +L+ ++ + G I +FL V+ L
Sbjct: 178 IALARFDVA---ITLHHNGKLMRQYRAAPDKSQYERRLGTICGATFLQHALAVSWQHDDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P + + QY Y+N R + +L+NH A + +
Sbjct: 235 TIHGWVADPVGAKQLPDMQYCYVNQRMMRD----RLINH------------AIRQAYQDQ 278
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
S Q PAY+L L PH + D+ P K V F V FI +A+ S + A
Sbjct: 279 LSDDQQ-PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVMSVLQQASA 334
>gi|397650619|ref|YP_006491146.1| DNA mismatch repair protein [Streptococcus mutans GS-5]
gi|449994775|ref|ZP_21822702.1| DNA mismatch repair protein [Streptococcus mutans A9]
gi|392604188|gb|AFM82352.1| DNA mismatch repair protein [Streptococcus mutans GS-5]
gi|449184935|gb|EMB86844.1| DNA mismatch repair protein [Streptococcus mutans A9]
Length = 651
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 166/352 (47%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V+D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|290581354|ref|YP_003485746.1| mismatch repair protein [Streptococcus mutans NN2025]
gi|450068240|ref|ZP_21847051.1| DNA mismatch repair protein [Streptococcus mutans NLML9]
gi|254998253|dbj|BAH88854.1| putative mismatch repair protein [Streptococcus mutans NN2025]
gi|449207235|gb|EMC07913.1| DNA mismatch repair protein [Streptococcus mutans NLML9]
Length = 651
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DSRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|450174689|ref|ZP_21884720.1| DNA mismatch repair protein [Streptococcus mutans SM1]
gi|449248145|gb|EMC46406.1| DNA mismatch repair protein [Streptococcus mutans SM1]
Length = 651
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 166/352 (47%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V+D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|299144076|ref|ZP_07037156.1| DNA mismatch repair protein MutL [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518561|gb|EFI42300.1| DNA mismatch repair protein MutL [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 619
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 148/269 (55%), Gaps = 11/269 (4%)
Query: 7 LPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSGISR 65
L EA + +G ++ + +V+EL+ NS+DA A + V V G Y+++ DDG G+ +
Sbjct: 6 LDEATIAKIAAGEIIENPASIVKELLENSIDAKAKNIIVEVRGNIGSYIRITDDGIGMDK 65
Query: 66 DGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYR 125
D L L RH+TSKL D+ + I + GFRGEALASIS +S +E++TK +G R
Sbjct: 66 DDLNLAFLRHSTSKLKTAEDLHN---IVSLGFRGEALASISHISKIEVLTKTKDDLSGTR 122
Query: 126 KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIAL 185
++ K + ++ VGTT +D+FYN PVR+KY++ + + + + V +IAL
Sbjct: 123 AEIEDGKI--VKMNSIGLPVGTTFYVKDVFYNMPVRKKYLKLDNTE-FNYIYEVVQKIAL 179
Query: 186 VHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDGALEISGYI 244
+P +S K I +++++ S++ L + S G E S L E N + + +I +I
Sbjct: 180 GNPDISIKLI---RDNKVILNSSATDNLKNHIFSILGREVASNLIEGNFSSNSYKIKSFI 236
Query: 245 SSPYDSISVKAFQYVYINSRYVCKGPIHK 273
S S + QY+YIN RYV I K
Sbjct: 237 SDNKLYRSNRYHQYIYINGRYVKNLDISK 265
Score = 41.2 bits (95), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 73/189 (38%), Gaps = 31/189 (16%)
Query: 1181 AGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI------GYQLLQ 1234
+ G +IDQHAA ERI E+ + + + E S Q L+ PEI + L+
Sbjct: 448 SKGRCYLIDQHAAHERILYEKFKEQFENSEVLS-------QILITPEIIELSVEEKEKLE 500
Query: 1235 NFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQ 1294
N E K G+ I G S I + VP IFG + D +
Sbjct: 501 NNYELFKSLGF--EIEEFGENS--------------IVIRQVPMIFGHGVR-YDFIHDTI 543
Query: 1295 QLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1354
D S+ +++ GD L E +++ L + + C HGRP
Sbjct: 544 DSLDKIKQSSYEVDSYKIMKKACKAAV-KAGDELSDMEVQALIKSLLECKNPYTCPHGRP 602
Query: 1355 TTVPLVNLE 1363
T + L +LE
Sbjct: 603 TIIELKSLE 611
>gi|227544211|ref|ZP_03974260.1| DNA mismatch repair protein MutL [Lactobacillus reuteri CF48-3A]
gi|338204108|ref|YP_004650253.1| DNA mismatch repair protein HexB [Lactobacillus reuteri SD2112]
gi|133930483|gb|ABO43813.1| MutL [Lactobacillus reuteri]
gi|227185804|gb|EEI65875.1| DNA mismatch repair protein MutL [Lactobacillus reuteri CF48-3A]
gi|336449348|gb|AEI57963.1| DNA mismatch repair protein HexB [Lactobacillus reuteri SD2112]
Length = 668
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 180/373 (48%), Gaps = 34/373 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L + N + +G V+ +V+ELV NS+DA + +V + V V+V+DD
Sbjct: 1 MGKIHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + + L RHATSK+ D+ + T GFRGEAL SI+ V+ + + T G
Sbjct: 61 GDGIAAEDIRLAFHRHATSKINSRHDL---FKVQTMGFRGEALPSIASVADVTLTTAQAG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ G ++G K L + R+ GT + DLF+N P R KY++ SP+ L +
Sbjct: 118 QEEGTMIHLRGGKELVVKPAGARQ--GTDIKVTDLFFNTPARLKYLK-SPQTELTRITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL +P V+F F + EL + +++ ++ + +G++ + E++ D +
Sbjct: 175 INRLALANPAVAFSF--THNGRELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDDFK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SG++S P + + + + + IN RY+ +++ +G
Sbjct: 233 VSGFVSLPELTRASRQYITITINHRYIR-------------------NFELTKAITQGYE 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++N+ L D+ P K V + ++ I IR ++IA +
Sbjct: 274 SKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLIKLIAETIR----QRIAVE 329
Query: 358 SFDVDMLEDAELP 370
+ D+ D +P
Sbjct: 330 NLIPDVDADQFIP 342
>gi|123440758|ref|YP_001004750.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166232113|sp|A1JIR3.1|MUTL_YERE8 RecName: Full=DNA mismatch repair protein MutL
gi|122087719|emb|CAL10504.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 635
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 187/380 (49%), Gaps = 36/380 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGA+++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARHATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQNE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
IAL V+ I++ +L+ S L S G ++ G L
Sbjct: 178 IALARFDVA---INLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S ++ QY Y+N+R + +L+NH +A LK
Sbjct: 235 TIRGWVADPAASRTLSEMQYCYVNNRMMRD----RLINHAIR--------QAYQDLLKDD 282
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 283 QQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQTATP 335
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+++ ED E +E+ R+Q
Sbjct: 336 LLNIN--EDGE-EIEAPRWQ 352
>gi|148658624|ref|YP_001278829.1| DNA mismatch repair protein MutL [Roseiflexus sp. RS-1]
gi|148570734|gb|ABQ92879.1| DNA mismatch repair protein MutL [Roseiflexus sp. RS-1]
Length = 605
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 174/356 (48%), Gaps = 33/356 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I L V + +G V+ VV ELV N++DAGA ++ V G ++V DDG G
Sbjct: 3 IRVLDATVAAQIAAGEVIERPASVVRELVENALDAGARRIAVEARGGGLREIRVQDDGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I D + L RHATSKL + DD I T GFRGEAL SI+ V+ + IT+A G
Sbjct: 63 IPADEVELAFARHATSKL---STADDLWSISTLGFRGEALPSIAAVAQVICITRAAGADV 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + G + I GTT+ R+LFYN PVRR++++S + ++ V +
Sbjct: 120 GVELRIAGGEV--QAIMPRGCSPGTTISVRNLFYNTPVRREFLRSDATES-AAITAVVTQ 176
Query: 183 IALVHPKVSFKF-IDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA---- 237
AL +P+V F ID + L T + A I +G++ L V A+ G
Sbjct: 177 YALAYPEVRFSLAIDGRAT---LHTSGNGDLRAAAIEVYGLDVARQLLPVEASTGEGVEY 233
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYV-CKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+++SG +S P + S +A ++++N R + +G I +L + +K
Sbjct: 234 VQVSGLVSPPGLTRSSRAAIHLFVNRRAIQPRGQIAMVLEEAYHTL-----------LMK 282
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
G+ P +LN+ + D+ P K+ V F+D V++ + RA+RSA ++
Sbjct: 283 GRH------PVAILNISVHPAAVDVNVHPTKSEVKFRDTTRVMSTLGRAVRSALLE 332
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 39/230 (16%)
Query: 1155 PDSI---NKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEG 1211
PD + S L +++ Q+ + +I + + +IDQHAA ERI E L + +G
Sbjct: 404 PDPLPPTRASRLPPLRIIGQIAQSYIVAESADGMYLIDQHAAHERITYERLMAQRGAGAV 463
Query: 1212 KSVAYLDAEQELVLPEI------GYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQ 1265
+S QEL++P++ + LL A ++ +WG++ F ++L
Sbjct: 464 ES-------QELLMPQVVDLPPTAHDLLLAAANRLAEWGFVVE-------PFGRSLR--- 506
Query: 1266 RQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKACRGAIM 1323
+ A+P + LLE L+ G++ P R +L + +C ++
Sbjct: 507 -------VRAIPAVLYPGDLTTALLEIADHLSGRGGAT---PHDWREAMLITLSCHTSVR 556
Query: 1324 FGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLN 1373
G +L E +V +L+Q C HGRPT + L+ + +Q ++
Sbjct: 557 AGQTLSFDEMRGLVMQLEQCESPRTCPHGRPTMI-LLTTTQIERQFGRIR 605
>gi|25012090|ref|NP_736485.1| DNA mismatch repair protein [Streptococcus agalactiae NEM316]
gi|81588689|sp|Q8E2R5.1|MUTL_STRA3 RecName: Full=DNA mismatch repair protein MutL
gi|24413634|emb|CAD47711.1| Unknown [Streptococcus agalactiae NEM316]
Length = 657
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 169/354 (47%), Gaps = 40/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 1 MSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + VL RHATSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 61 GEGMTSEDAVLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATEQ 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++ H
Sbjct: 118 GKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ V R++L HP+V+F I+ E+ T + + +G+ + E++
Sbjct: 171 II-DIVNRLSLAHPEVAFTLIN--DGKEMTKTSGTGDLRQAIAGIYGLNTAKKMIEISNA 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 228 DLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRSI 268
Query: 295 LKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 269 LDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISTAI 322
>gi|27382604|ref|NP_774133.1| DNA mismatch repair protein [Bradyrhizobium japonicum USDA 110]
gi|81841408|sp|Q89DE6.1|MUTL_BRAJA RecName: Full=DNA mismatch repair protein MutL
gi|27355776|dbj|BAC52758.1| DNA mismatch repair protein [Bradyrhizobium japonicum USDA 110]
Length = 603
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 171/359 (47%), Gaps = 39/359 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
+ +LPE V N + +G V+ VV+ELV N++DAGA+++ V+ G + + DDGSG
Sbjct: 3 VRQLPEQVVNRIAAGEVVERPASVVKELVENAIDAGASRIDVFTDGGGRRRIGITDDGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ L L ERHATSKL D +D I T GFRGEAL SI V+ L I T+ G P+
Sbjct: 63 MTAKDLALAVERHATSKL----DDEDLLQIRTLGFRGEALPSIGSVARLSITTRHAGEPH 118
Query: 123 GYRKVMKG---SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ ++G S+ + + GT V DLFY P R K++++ + ++++
Sbjct: 119 AWALTVEGGEKSEIMPAALAH-----GTRVEVNDLFYATPARLKFLKTD-RTEAEAIREV 172
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSP-----LALLISSFGIEDFSFLDEVNAN 234
V R+A+ P V+F + E+ T +++ P L L G E S EV+A
Sbjct: 173 VRRLAMARPDVAFT---LAGEERAPVTWAAALPGAAGRLTRLGDILGAEFRSHAIEVHAE 229
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
+ +SGY ++P + + QY+++N R P+ L A SD +
Sbjct: 230 REGIVVSGYAAAPALTKANALGQYLFVNGR-----PVRDKLILGAVRAAYSD-------Y 277
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
L R P L + D P KT V F++ V A I ++ A ++
Sbjct: 278 LPRDRH-----PVLALFVTLDPREVDANVHPAKTEVRFRNAGLVRALIVHGLKEALARE 331
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 1171 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1230
Q+ + +I L ++DQHAA ERI E L+ L+ G L + + + E
Sbjct: 420 QIHETYIVSQTRDGLIIVDQHAAHERIVYEGLKAS-LAANGVQRQILLIPEIVEMDEATV 478
Query: 1231 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1290
+ L ++++ +G G+ + + P + G + L
Sbjct: 479 ERLLERSDELASFGLAIESFGPGA----------------VAVRETPSLLGKTNAGGLLR 522
Query: 1291 EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCA 1350
+ + +A+ D + ++ V + AC G++ G L P E ++ E+++T QC
Sbjct: 523 DLSEHMAEWDEALPLERRLMHVAATMACHGSVRAGRRLRPEEMNALLREMEETPNSGQCN 582
Query: 1351 HGRPTTVPL 1359
HGRPT V L
Sbjct: 583 HGRPTYVEL 591
>gi|76787614|ref|YP_330627.1| DNA mismatch repair protein [Streptococcus agalactiae A909]
gi|406710409|ref|YP_006765135.1| DNA mismatch repair protein HexB [Streptococcus agalactiae
GD201008-001]
gi|424048528|ref|ZP_17786079.1| DNA mismatch repair protein [Streptococcus agalactiae ZQ0910]
gi|123744498|sp|Q3JYM6.1|MUTL_STRA1 RecName: Full=DNA mismatch repair protein MutL
gi|76562671|gb|ABA45255.1| DNA mismatch repair protein HexB [Streptococcus agalactiae A909]
gi|389649993|gb|EIM71464.1| DNA mismatch repair protein [Streptococcus agalactiae ZQ0910]
gi|406651294|gb|AFS46695.1| DNA mismatch repair protein HexB [Streptococcus agalactiae
GD201008-001]
Length = 657
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 169/354 (47%), Gaps = 40/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 1 MSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + VL RHATSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 61 GEGMTSEDAVLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATEQ 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++ H
Sbjct: 118 GKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ V R++L HP+V+F I+ E+ T + + +G+ + E++
Sbjct: 171 II-DIVNRLSLAHPEVAFTLIN--DGKEMTKTSGTGDLRQAIAGIYGLNTAKKMIEISNA 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 228 DLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRSI 268
Query: 295 LKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 269 LDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISSAI 322
>gi|258515357|ref|YP_003191579.1| DNA mismatch repair protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779062|gb|ACV62956.1| DNA mismatch repair protein MutL [Desulfotomaculum acetoxidans DSM
771]
Length = 639
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 143/268 (53%), Gaps = 11/268 (4%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGAT--KVFVYVGVCNCYVKVVD 58
M I L E N + +G V+ VV+ELV NS+DAGA+ ++ +Y G + V+D
Sbjct: 1 MPKIIILDELTANQIAAGEVVERPASVVKELVENSLDAGASAIEINIYEGGLKS-ITVID 59
Query: 59 DGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 118
+GSG+S + VL RHATSKL A +D T I T GFRGEAL SI+ ++ +E+ T+A
Sbjct: 60 NGSGMSEEDAVLAFYRHATSKL---ASAEDLTNINTMGFRGEALPSIASIARVELKTRAQ 116
Query: 119 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
+G R + G K L +G GT+V DLFYN P R K+MQ++ + + +
Sbjct: 117 DSVSGIRLEISGGKTLSVG--SAGCPPGTSVTVSDLFYNTPARLKHMQTASAEAAR-INE 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
V R+A+ P+VSF+ + + S S L + + +GI+ L + + L
Sbjct: 174 LVNRLAMAKPEVSFRL--RHNGRNVFYAPGSGSLLDAVAAVYGIKIARELIPLEEENALL 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYV 266
+I GY S P + + Q ++IN R V
Sbjct: 232 KIYGYTSRPSVNRGNRKQQTLFINHRLV 259
Score = 42.0 bits (97), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 131/314 (41%), Gaps = 48/314 (15%)
Query: 1060 KPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSIISGTKWRNG 1119
+P E+ +F PD KI + + D ++K + L ++A+ ++ +G +
Sbjct: 349 EPYQEKLNFTPD-KIAEAKLRDNPTQENNSHYKRPVLEEKKLASEAK-ENLETGNRLVQV 406
Query: 1120 HPQT---TNNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKF 1176
+ QT +NNI QD I + T P + S L Q+ +
Sbjct: 407 NNQTGRAESNNIRNPAAGQDQAQIIVRQ--NTTVSEKAPVNKKNSSFPSLWPLAQLMPTY 464
Query: 1177 IPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNF 1236
I A L +IDQHAA ERI E+ + + EG+ V+ Q L++P I +L NF
Sbjct: 465 ILASADKGLFIIDQHAAHERILFEKYQKQF--SEGQVVS-----QMLLIP-ITLEL--NF 514
Query: 1237 AEQ---------IKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDV 1287
E+ +K+ G+I F K LL+ VP N+S
Sbjct: 515 REEELIIKHIILLKEIGFII-------EEFGKGTFLLR---------GVPG----NVSPG 554
Query: 1288 DLLEFLQQLADTDGSSTTPPSVL--RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
+ + D S T VL + + AC+ A+ G+ L PS ++E+L +T
Sbjct: 555 QEKDLFFDILDFSEDSLTGREVLVQNMAAAMACKAAVKAGEKLTPSAMLALLEQLAETES 614
Query: 1346 CFQCAHGRPTTVPL 1359
+ C HGRPT + L
Sbjct: 615 PYTCPHGRPTLIHL 628
>gi|114048922|ref|YP_739472.1| DNA mismatch repair protein [Shewanella sp. MR-7]
gi|123030290|sp|Q0HR40.1|MUTL_SHESR RecName: Full=DNA mismatch repair protein MutL
gi|113890364|gb|ABI44415.1| DNA mismatch repair protein MutL [Shewanella sp. MR-7]
Length = 644
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 172/355 (48%), Gaps = 35/355 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +K+ D+
Sbjct: 1 MG-IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDN 59
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI +D L L RHATSKL L DD I +FGFRGEALASIS VS L + ++
Sbjct: 60 GSGIPKDELALALSRHATSKLHSL---DDLEAILSFGFRGEALASISSVSRLTLTSRTAE 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ ++ +G + + + VG+T+ DLF+N P RR++++S + H + +
Sbjct: 117 QTEAWQAYAEGVD-MAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTH-IDEW 174
Query: 180 VLRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNAND 235
+ RIALV + F + ++ + L L G + F DE V
Sbjct: 175 LKRIALVRGDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQVAGRQ---FADEALRVECQH 231
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
L +SGY+ SP+ ++ + Y Y+N R V +L+NH F
Sbjct: 232 DDLRLSGYLQSPWSTV-LTDTHYFYVNGRLVRD----RLVNH-----------AVRQAFA 275
Query: 296 KGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
+ + P Y+L L PH + D+ P K V F V +I +A++SA
Sbjct: 276 QKAEVEQ---PGYVLMLDIDPHQV-DVNVHPAKHEVRFHQSRYVHDYILQALQSA 326
>gi|149370649|ref|ZP_01890338.1| DNA mismatch repair protein [unidentified eubacterium SCB49]
gi|149356200|gb|EDM44757.1| DNA mismatch repair protein [unidentified eubacterium SCB49]
Length = 618
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 170/345 (49%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DAGA+ + V ++V+DDG G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASTITLVIKDAGKTLIQVIDDGVG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ L ERHATSK+ D+ + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MNVTDARLAFERHATSKIKAAEDL---FNLHTKGFRGEALASIAAIAHVELKTKTEEDDV 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + ++GS+ I K G+T+ ++LFYN P RR +++S+ ++ H + + R
Sbjct: 122 GTQICIEGSEVTSQEIVVTPK--GSTISVKNLFYNIPARRNFLKSNTVEIRHIIDEF-HR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP + F I+ S+ + SS+ +++ G + L V L+++G
Sbjct: 179 VALAHPNLGFTMINNGSD---VFKLPSSNLRQRIVNIMGTKTNEKLVPVTEETDILKVNG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P S + QY ++N+R++ H L + + A+++ G +K
Sbjct: 236 FVIKPEFSKKSRGDQYFFVNNRFIKS---HYLHHAVTAAYE---------GLVKDGTQ-- 281
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P Y L L D+ P KT + F D + A + I+
Sbjct: 282 ---PGYFLFLDVNPQSIDINIHPTKTEIKFDDEHAIYAMLRATIK 323
>gi|421147489|ref|ZP_15607176.1| DNA mismatch repair protein [Streptococcus agalactiae GB00112]
gi|401685843|gb|EJS81836.1| DNA mismatch repair protein [Streptococcus agalactiae GB00112]
Length = 657
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 169/354 (47%), Gaps = 40/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 1 MSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + VL RHATSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 61 GEGMTSEDAVLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATEQ 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++ H
Sbjct: 118 GKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ V R++L HP+V+F I+ E+ T + + +G+ + E++
Sbjct: 171 II-DIVNRLSLAHPEVAFTLIN--DGKEMTKTSGTGDLRQAIAGIYGLNTAKKMIEISNA 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 228 DLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRSI 268
Query: 295 LKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 269 LDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISSAI 322
>gi|315640094|ref|ZP_07895217.1| DNA mismatch repair protein HexB [Enterococcus italicus DSM 15952]
gi|315484141|gb|EFU74614.1| DNA mismatch repair protein HexB [Enterococcus italicus DSM 15952]
Length = 656
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 165/328 (50%), Gaps = 35/328 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSG 62
I L E + N + +G V+ VV+ELV N++DAG+T++ + + ++VVD+G G
Sbjct: 3 IKELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDILLEDAGLKKIQVVDNGEG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I+ + + +RHATSK+ H AD+ I T GFRGEAL SI+ VS + I T + G N
Sbjct: 63 IADEDVENAFKRHATSKIHHQADL---FRIRTLGFRGEALPSIASVSEMTIETASQGATN 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++G L + RK GT +V +LF+N P R KY+++ + L ++ V R
Sbjct: 120 GSIVHLQGGTILSHKMGPLRK--GTKIVVENLFFNTPARLKYVKTFQTE-LANIGDIVNR 176
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP V+F+ + +++ T + + +G++ + + A+D +I G
Sbjct: 177 LALSHPSVAFRLV--HDGNKMTQTAGNGDLKQTIAGIYGLQTAKKMLVIAADDLDFQIKG 234
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
YIS P + + + + + IN R++ ++ N ++G SK
Sbjct: 235 YISLPEVTRANRNYLSLIINGRFI-------------------KNYALNKAIIQGYGSK- 274
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHV 330
L+ R P ++ ++T DPL V
Sbjct: 275 ------LMVGRFPIAIIEITMDPLLVDV 296
>gi|78188128|ref|YP_378466.1| DNA mismatch repair protein [Chlorobium chlorochromatii CaD3]
gi|123757053|sp|Q3AUA2.1|MUTL_CHLCH RecName: Full=DNA mismatch repair protein MutL
gi|78170327|gb|ABB27423.1| DNA mismatch repair protein MutL [Chlorobium chlorochromatii CaD3]
Length = 644
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 169/356 (47%), Gaps = 37/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I RLP++V N + +G V+ VV+EL+ N++DAGATK+ V + +++ D+
Sbjct: 1 MPIITRLPDSVANKISAGEVVQRPASVVKELLENAIDAGATKISVTIKDAGKELIRIADN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++RD +L ER ATSK+ D+D + T GFRGEALASI VS E+ T+
Sbjct: 61 GVGMNRDDALLCVERFATSKIKSADDLD---ALHTLGFRGEALASICSVSHFELKTRQAD 117
Query: 120 RPNGYR-KVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + GS L + E+ GT+ R+LFYN P RRK+++S+ + H + +
Sbjct: 118 ATLGLLFRYDGGSLVEELEVQAEQ---GTSFSVRNLFYNVPARRKFLKSNATE-YHHLFE 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
V L +P++ ++ ++ +DE L ++ L L +G + S L EV + L
Sbjct: 174 IVKSFTLAYPEIEWRMVN---DDEELFNFKNNDVLERLNFYYGDDFASSLIEVAEQNDYL 230
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I GY+ P K QY +IN R V LL + ++ G
Sbjct: 231 PIHGYLGKPALQKKRKLEQYFFINRRLVQN---RMLLQAVQQAY--------------GD 273
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
+ P LL L S D+ P K + F D ER +RS + I
Sbjct: 274 LLVERQTPFVLLFLTIDPSRIDVNVHPAKLEIRFDD--------ERQVRSMFYPVI 321
>gi|404418528|ref|ZP_11000295.1| DNA mismatch repair protein [Staphylococcus arlettae CVD059]
gi|403489121|gb|EJY94699.1| DNA mismatch repair protein [Staphylococcus arlettae CVD059]
Length = 649
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 182/404 (45%), Gaps = 46/404 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
MG I L ++ N + +G V+ VV+EL+ N++DA AT++ + V GV + ++VV
Sbjct: 1 MGKIKELQTSLANKIAAGEVVERPGSVVKELLENAIDAQATEINIAVEQSGVSS--IRVV 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GIS D L L+ RHATSKL D DD I T GFRGEALASIS V+ + + +
Sbjct: 59 DNGTGISEDDLALVFHRHATSKLD---DDDDLFHIRTLGFRGEALASISSVAKVTLKSCT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
V G+ L + GT ++ LFYN P R KY++S + L +
Sbjct: 116 DNLEGHEVYVENGA---ILQQKPAKAKQGTDILVESLFYNTPARLKYIKSLYTE-LGKIT 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
V R+A+ HP + F E++ T S ++ +G++ L + +
Sbjct: 172 DIVNRMAMSHPNIRFTL--TADGKEIIKTNGSGRTNEVMAEIYGMKVAKDLVHIQGDTSD 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ G+++ P S S K + ++IN RY+ ++ N L+G
Sbjct: 230 YHLEGFVAKPEHSRSNKHYISIFINGRYIR-------------------NFVLNKAILEG 270
Query: 298 KRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
+ P LN+ L D+ P K V E + I IR A+ KI
Sbjct: 271 YHTLLTIGRYPICYLNIEMDPILVDVNVHPTKLEVRLSKEEQLYKLIVEKIREAFHDKIL 330
Query: 356 --HDSFD--------VDMLEDAELPLES-SRFQSHQSSTHLHSS 388
H+ D +D E ++ E ++ HQ+ST S+
Sbjct: 331 IPHNDLDKVNKKNKVLDQFEQQKIDFEQRQQYNDHQASTEATSN 374
>gi|450072840|ref|ZP_21848813.1| DNA mismatch repair protein [Streptococcus mutans M2A]
gi|449210721|gb|EMC11156.1| DNA mismatch repair protein [Streptococcus mutans M2A]
Length = 651
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 166/352 (47%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T + L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGNLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|410595359|ref|YP_006952086.1| DNA mismatch repair protein mutL [Streptococcus agalactiae SA20-06]
gi|410518998|gb|AFV73142.1| DNA mismatch repair protein mutL [Streptococcus agalactiae SA20-06]
Length = 676
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 170/354 (48%), Gaps = 40/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
+ I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 20 LSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 79
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + VL RHATSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 80 GEGMTSEDAVLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATEQ 136
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++ H
Sbjct: 137 GKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELAH 189
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ V R++L HP+V+F I+ E+ T +S + +G+ + E++
Sbjct: 190 II-DIVNRLSLAHPEVAFTLIN--DGKEMTKTSGTSDLRQAIAGIYGLNTAKKMIEISNA 246
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 247 DLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRSI 287
Query: 295 LKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 288 LDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISSAI 341
>gi|238797610|ref|ZP_04641107.1| DNA mismatch repair protein mutL [Yersinia mollaretii ATCC 43969]
gi|238718607|gb|EEQ10426.1| DNA mismatch repair protein mutL [Yersinia mollaretii ATCC 43969]
Length = 630
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 233/530 (43%), Gaps = 81/530 (15%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I+++ L L RHATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 INKEDLALALARHATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQNE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
IAL V+ I++ +L+ S L S G ++ L
Sbjct: 178 IALARFDVA---INLSHNGKLMRQYRAATDPSQHERRLASICGPAFLQHALAISWQHDDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S ++ QY Y+NSR + +L+NH +A LK
Sbjct: 235 TIRGWVADPAASRTLSEMQYCYVNSRMMRD----RLINHAIR--------QAYQDLLKDD 282
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 283 QQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQAATP 335
Query: 358 SFDVDMLEDAELPLESSRFQSHQS-----STHLHSSPLKNLAKQRDHMF--------HKE 404
+V+ ED E +E+ R+Q + + P K L +R+ H
Sbjct: 336 VLNVN--EDGE-EIEAPRWQPENRVAAGVNKYAQPEPTKTLPIERNAATERVSSVREHAA 392
Query: 405 CERITFQEFQKDPVELAEENTEMEFFS---------------QPKHSSSLLDG---SFAE 446
T Q +QK EL + + + +P + + L G SF
Sbjct: 393 PAYSTGQPYQKQQGELYRQLVQPAVMTPPAELRAPVVAPPKPRPTPADAPLQGDHYSFGR 452
Query: 447 CLPIVPP---KIDHR------VWTIESSWFQDHQPSRHLFSPPLENLKKE 487
L + PP I+++ + W + Q +PP E L+ +
Sbjct: 453 VLTVFPPCYALIEYKQGIALLALKVAERWLKQAQ-----LNPPPEGLRPQ 497
>gi|317500421|ref|ZP_07958645.1| DNA mismatch repair protein MutL [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089572|ref|ZP_08338471.1| hypothetical protein HMPREF1025_02054 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336438887|ref|ZP_08618508.1| hypothetical protein HMPREF0990_00902 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316898176|gb|EFV20223.1| DNA mismatch repair protein MutL [Lachnospiraceae bacterium
8_1_57FAA]
gi|330404940|gb|EGG84478.1| hypothetical protein HMPREF1025_02054 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336017377|gb|EGN47139.1| hypothetical protein HMPREF0990_00902 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 692
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 209/448 (46%), Gaps = 44/448 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ +V+ELV N++DA AT V V + G+ +++V
Sbjct: 1 MPHIQVLDQITIDKIAAGEVIERPASIVKELVENAIDAKATSVTVEIKDGGIS--FIRVT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI D + RH+TSK+ ++ I + GFRGEAL+SI+ V+ E+ITK
Sbjct: 59 DNGCGIEADEVRCAFLRHSTSKI---RTAEELVSIHSLGFRGEALSSIAAVTRTEVITKT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
+G + V++G K L ++ GTT + LFYN P RRK++++ + H V+
Sbjct: 116 EEGQSGIKYVIEGGKETAL--EETGAPNGTTFLIHQLFYNIPARRKFLKTPVTEAGH-VQ 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
++ +AL HP+VSF FI+ + E L T + ++ + +G E S L E++
Sbjct: 173 DLLIHLALSHPEVSFLFIN--NGQEKLRTSGNGKLKDVIYNVYGREVTSNLLELDYKKDG 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
L ISG++ P + + F+ ++N RYV + K L F +
Sbjct: 231 LSISGFLGKPVITRGNRNFENFFVNGRYVKSAMLSKSLEDAYKDFTMQHKF--------- 281
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
P +L+ + L D+ P K + F+ + V + A+ +
Sbjct: 282 --------PFAVLHFQVEGDLIDVNVHPTKMELRFQRQQEVYNTMYEAVHRRLL------ 327
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHL------HSSPLKNLAKQRDHMFHKECERITFQ 411
+ ++++ A +P + Q + S L ++ + K R+ M +E E++ +
Sbjct: 328 --EPELIQTATVPDPADAAQKKKESPFLLKPKSIENTKYDPIEKIREKMQEREPEQVREK 385
Query: 412 EFQKDPVELAEENTEMEFFSQPKHSSSL 439
+ P ++ E+ + E K +S++
Sbjct: 386 AQETKPEQVREKVQDEEQGQARKQTSAI 413
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 1184 TLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDW 1243
+L +IDQHAA ER+ E ++ S E S YL L L QLL+ ++
Sbjct: 521 SLYIIDQHAAHERVMYERTLKEMKSREYTS-QYLSPPIILSLSMQEAQLLEEHIDRFTRI 579
Query: 1244 GWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGS 1302
G+ I G + + AVP +FG+ ++ L+E + LAD +
Sbjct: 580 GF--EIEHFGGEEY--------------AVRAVPDNLFGIAKKEL-LMEMIDDLADGINT 622
Query: 1303 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1362
S TP + + S +C+ A+ + L E ++ EL + C HGRPT + +
Sbjct: 623 SMTPDLIDEKVASMSCKAAVKGNNRLSAKEVDALIGELLTLDNPYHCPHGRPTIIAMTKR 682
Query: 1363 E 1363
E
Sbjct: 683 E 683
>gi|37681257|ref|NP_935866.1| DNA mismatch repair protein [Vibrio vulnificus YJ016]
gi|61214242|sp|Q7MH01.1|MUTL_VIBVY RecName: Full=DNA mismatch repair protein MutL
gi|37200008|dbj|BAC95837.1| DNA mismatch repair enzyme [Vibrio vulnificus YJ016]
Length = 664
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 219/495 (44%), Gaps = 84/495 (16%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ VV+ELV NS+D+GATK+ + + +++ D+GS
Sbjct: 2 TIRILPARLANQIAAGEVVERPASVVKELVENSLDSGATKIDIDIEKGGAKLIRIRDNGS 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI +D L L RHATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 62 GIVKDELGLALSRHATSKIHTL---DDLEAIMSLGFRGEALASISSVSRLTLTSRPATQE 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ +G + + + + +GTTV DLF+N P RRK++++ + H + + +
Sbjct: 119 QAWSAYTEG-RDMQVKLQPTAHPIGTTVEVVDLFFNTPARRKFLRTEKTEFAH-IDELLK 176
Query: 182 RIALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 227
RIAL VS K I D+++E L C + +L
Sbjct: 177 RIALSRFDVSITLRHNGKVIRQYRAAHNDLQAEKRLATVCGQAFVRCML----------- 225
Query: 228 LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSD 286
++ L++ G+I++P + QY Y+N R + KL+NH + S++ S
Sbjct: 226 --KIELEHQGLKLHGWITTPEGARQQSDLQYCYVNGRMMRD----KLINHAIRQSYETS- 278
Query: 287 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 345
K + AY+L + PH + D+ P K V F V FI +A
Sbjct: 279 -------------LKPEQFAAYVLFIELDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQA 324
Query: 346 IRSAWMKKIAHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKEC 405
+ SA + D +E ++ + +Q+ L S P ++ E
Sbjct: 325 LASALAQS--------DSIEQPQINESAFHYQAEPEVAPLGSFPAES----------NEV 366
Query: 406 ERITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFA--ECLPIVPPKIDHRVWTIE 463
+ + +K P + E + QP + L+ SF+ + + P + R
Sbjct: 367 PQAVYHAIEKAPAYPRKAGQEQQL--QP---VAPLESSFSSEQGREVAPAPHNER----- 416
Query: 464 SSWFQDHQPSRHLFS 478
++W + P+RH S
Sbjct: 417 NAWMESRSPARHTTS 431
>gi|154504381|ref|ZP_02041119.1| hypothetical protein RUMGNA_01885 [Ruminococcus gnavus ATCC 29149]
gi|153795310|gb|EDN77730.1| DNA mismatch repair domain protein [Ruminococcus gnavus ATCC 29149]
Length = 664
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 152/289 (52%), Gaps = 21/289 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ +V+ELV NS+DA A V V + G+ ++V
Sbjct: 1 MPQIQVLDQITIDKIAAGEVIERPASIVKELVENSIDAKAASVTVEIQDGGIS--LIRVT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+GSGI R+ + RH+TSK+ + D+ I + GFRGEAL+SIS V+ E+ITK
Sbjct: 59 DNGSGIEREDIRNAFLRHSTSKIRKVEDL---AHIASLGFRGEALSSISAVTRTELITKT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
G R V++G G++ +D GTT + R LFYN P RRK++++ +
Sbjct: 116 KEDTFGTRYVIEG------GVEQSLEDAGAPDGTTFLVRQLFYNVPARRKFLKTPMTEAG 169
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
H V+ ++R+AL HP+V+F FI+ + + T + ++ S +G E + L E++
Sbjct: 170 H-VQDLLMRLALSHPEVAFTFIN--NGQTKMRTSGNGKLKDVIYSIYGREAAANLIELDY 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 282
+ L + GY+ P + + F+ ++N RYV + K + F
Sbjct: 227 SMDGLVMKGYLGKPVITRGNRNFENYFVNGRYVKNAMLSKAIEDAYKDF 275
Score = 40.8 bits (94), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 23/200 (11%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
K++ QV + + V +L +IDQHAA ER+ L E K + + YL L L
Sbjct: 476 KLIGQVFETYWLVEFENSLYIIDQHAAHERV-LYERTLKEMKNREFTAQYLSPPIILSLS 534
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLS 1285
Q+L ++ G+ I G + + A+P +FG+
Sbjct: 535 MQEAQVLNENMDRFTRIGF--EIEPFGGEEY--------------AVRAIPDNLFGIAKK 578
Query: 1286 DVDLLEFLQQLADTDGSST--TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1343
++ L TDG ST TP + + S +C+ A+ + L E ++ EL
Sbjct: 579 ELLLE---MLDDLTDGISTSMTPELIDEKVASMSCKAAVKGNNRLSAQEADALIGELLLL 635
Query: 1344 SLCFQCAHGRPTTVPLVNLE 1363
+ C HGRPT + + E
Sbjct: 636 ENPYHCPHGRPTIIAMTQRE 655
>gi|225871418|ref|YP_002747365.1| DNA mismatch repair protein [Streptococcus equi subsp. equi 4047]
gi|254766176|sp|C0MAS4.1|MUTL_STRE4 RecName: Full=DNA mismatch repair protein MutL
gi|225700822|emb|CAW95527.1| DNA mismatch repair protein MutL [Streptococcus equi subsp. equi
4047]
Length = 660
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 191/413 (46%), Gaps = 45/413 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M TI LPE + N + +G V+ VV+ELV N++DA ++++ V + +++ D+
Sbjct: 1 MTTIIELPEVLANQIAAGEVIERPASVVKELVENAIDAKSSQITVEIEESGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + L L RHATSK+ +D+ I T GFRGEAL S++ +S L I T
Sbjct: 61 GEGMSHEDLPLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSVASISKLTIKTATAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G V G K L + VGT + +LFYN P R KYM+S ++ H V
Sbjct: 118 AEHGSILVASGGKIEQL--EAVSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHVV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPL-ALLISSFGIEDFSFLDEVNANDGAL 238
V R++L HP+++F I S+ + L S + L L +G+ + ++++ D
Sbjct: 175 VNRLSLAHPEIAFTLI---SDGKQLTQTSGAGDLRQALAGIYGLNTAKKMIDISSADLDF 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
E+ G++S P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVGGFVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 272
Query: 299 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
SK P +++++ L D+ P K + ++A I AI + ++
Sbjct: 273 GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEIRISKERELMALISTAISESLREQ--- 329
Query: 357 DSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC 405
D++ DA L S +S Q+S L S L Q++ F KE
Sbjct: 330 -----DLIPDALENLARSSTRSFSKPEQTSLPLQPSQLY-YDPQKNDFFTKET 376
>gi|225869420|ref|YP_002745368.1| DNA mismatch repair protein MutL [Streptococcus equi subsp.
zooepidemicus]
gi|259511151|sp|C0MGC4.1|MUTL_STRS7 RecName: Full=DNA mismatch repair protein MutL
gi|225702696|emb|CAX00809.1| DNA mismatch repair protein MutL [Streptococcus equi subsp.
zooepidemicus]
Length = 660
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 191/413 (46%), Gaps = 45/413 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M TI LPE + N + +G V+ VV+ELV N++DA ++++ V + +++ D+
Sbjct: 1 MTTIIELPEVLANQIAAGEVIERPASVVKELVENAIDAKSSQITVEIEESGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + L L RHATSK+ +D+ I T GFRGEAL S++ +S L I T
Sbjct: 61 GEGMSHEDLPLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSVASISKLTIKTATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G V G K L + VGT + +LFYN P R KYM+S ++ H V
Sbjct: 118 AEHGSILVASGGKIEQL--EAVSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHVV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPL-ALLISSFGIEDFSFLDEVNANDGAL 238
V R++L HP+++F I S+ + L S + L L +G+ + ++++ D
Sbjct: 175 VNRLSLAHPEIAFTLI---SDGKQLTQTSGTGDLRQALAGIYGLNTAKKMIDISSADLDF 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
E+ G++S P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVGGFVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 272
Query: 299 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
SK P +++++ L D+ P K + ++A I AI + ++
Sbjct: 273 GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEIRISKERELMALISTAISESLREQ--- 329
Query: 357 DSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC 405
D++ DA L S +S Q+S L S L Q++ F KE
Sbjct: 330 -----DLIPDALENLARSSTRSFSKPEQTSLPLQPSQLY-YDPQKNDFFTKET 376
>gi|212639350|ref|YP_002315870.1| DNA mismatch repair protein [Anoxybacillus flavithermus WK1]
gi|226723025|sp|B7GIA3.1|MUTL_ANOFW RecName: Full=DNA mismatch repair protein MutL
gi|212560830|gb|ACJ33885.1| DNA mismatch repair enzyme (predicted ATPase) [Anoxybacillus
flavithermus WK1]
Length = 608
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 169/354 (47%), Gaps = 27/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I +L +A+ N + +G V+ VV+ELV N++DA +T + V + ++VVD+
Sbjct: 1 MGKIRKLDDALANKIAAGEVVERPASVVKELVENAIDAHSTIIEVELEEAGLAKIRVVDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G + L ERHATSK+ AD+ I T GFRGEAL SI+ VS LE+ T G
Sbjct: 61 GDGFEEEDCFLAFERHATSKIKDEADL---FRIRTLGFRGEALPSIASVSHLELKTST-G 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G V+KG + + G RK GT + LF+N P R KYM++ ++ H V
Sbjct: 117 EGPGTWLVLKGGELVQHGRTSSRK--GTDITVSHLFFNTPARLKYMKTIHTELGHVV-DV 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL HP +SF+ + +L T + +L + +G++ + ++A
Sbjct: 174 INRLALAHPHISFRL--THNGKQLFYTNGNGDVRQVLAAIYGLDVAKKMIAIHAETLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RY+ ++K + + + L R
Sbjct: 232 IDGYVALPEVTRASRNYMTTIVNGRYIKNYSLYKAIE------------EGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P LN+ L D+ P K V F + +++ IR ++ KK
Sbjct: 280 H-----PITFLNIMMDPLLIDVNVHPAKLEVRFSKETELNELVQQTIRQSFQKK 328
>gi|257439841|ref|ZP_05615596.1| DNA mismatch repair protein MutL [Faecalibacterium prausnitzii
A2-165]
gi|257197750|gb|EEU96034.1| DNA mismatch repair domain protein [Faecalibacterium prausnitzii
A2-165]
Length = 716
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 168/354 (47%), Gaps = 28/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ L + + +G V+ VV+EL+ N++DAGA+++ V + +++ D+
Sbjct: 1 MAVIHVLDKHTAELIAAGEVVERPASVVKELLENAIDAGASQITVTIESGGVKLIEISDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI + + RHATSK+ DD I T GFRGEALASI+ V+ +E++T+
Sbjct: 61 GSGIEAEYIPTAFIRHATSKI---RTEDDLNHIHTLGFRGEALASIASVARVEVLTRTEN 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
++G + L + + VGTT+ +DLFYN P R K+++ + V
Sbjct: 118 DECASVYRIEGGEDYPL--EPGARGVGTTIRVQDLFYNTPARMKFLKKDSSEGTF-VADI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPL-ALLISSFGIEDFSFLDEVNANDGAL 238
V +AL HP+VSFKF+ E +L L + + G E L E++ +G
Sbjct: 175 VAHVALSHPEVSFKFV---REGKLQYVTPGDGKLRSAAYAVLGREFSRDLMELDNQEGVY 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G I+ P + ++ QY YIN RYV ++ + +F + ++GK
Sbjct: 232 RVWGLITQPRSCRASRSMQYFYINGRYVRN---RTMMAAMETAFKGTT--------MQGK 280
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P +L L P L D+ P KT V F + + A++ A +
Sbjct: 281 ------FPGGILLLEMPADLVDVNVHPAKTEVRFARENDIFDLVYHAVKLALAQ 328
>gi|253577911|ref|ZP_04855183.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850229|gb|EES78187.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 663
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 174/334 (52%), Gaps = 38/334 (11%)
Query: 27 VVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSGISRDGLVLLGERHATSKLGHLAD 85
+V+ELV N++DAGAT V V + +++ D+G G+ RD + L RHATSK+ + D
Sbjct: 7 IVKELVENAIDAGATAVTVEITDGGKKMIRITDNGGGMERDQVPLAFLRHATSKIEKVED 66
Query: 86 MDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPNGYRKVMKGSKCLYLGIDDERKDV 145
++ I + GFRGEAL+SI+ V+ +E+ITK +G R V+ G G+ + +D+
Sbjct: 67 LEH---IASLGFRGEALSSIAAVAQVELITKTPSALSGVRYVING------GVQESLEDM 117
Query: 146 ----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLRIALVHPKVSFKFIDMESED 201
GTT + R+LFYN P R K+++S + + V + ++AL HP++SFK+I +++
Sbjct: 118 GAPEGTTFLVRNLFYNTPARSKFLKSDTTEG-NYVSTLMEQLALSHPEISFKYI--QNKQ 174
Query: 202 ELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISGYISSPYDSISVKAFQYVYI 261
L T + + ++ + +G + L EV+ + ++I G++ P S + F+ YI
Sbjct: 175 VKLHTSGNYNVKDVIYNIYGRDITKALLEVSYENDFMKIEGFVGKPEISRGNRTFENYYI 234
Query: 262 NSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDL 321
N R+V I K D++K GFL + P L+++ + D+
Sbjct: 235 NGRFVKNRIIAK---------GIEDAYK---GFLMQHK-----FPFVSLHIQMEGNDLDV 277
Query: 322 TFDPLKTHVVF----KDWEPVLAFIERAIRSAWM 351
P K V F + ++ V + +A+ + M
Sbjct: 278 NVHPSKMEVRFARGTEVYDAVYETVHKALTTREM 311
>gi|336432332|ref|ZP_08612167.1| hypothetical protein HMPREF0991_01286 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336018669|gb|EGN48406.1| hypothetical protein HMPREF0991_01286 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 664
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 152/289 (52%), Gaps = 21/289 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ +V+ELV NS+DA A V V + G+ ++V
Sbjct: 1 MPQIQVLDQITIDKIAAGEVIERPASIVKELVENSIDAKAASVTVEIQDGGIS--LIRVT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+GSGI R+ + RH+TSK+ + D+ I + GFRGEAL+SIS V+ E+ITK
Sbjct: 59 DNGSGIEREDIRNAFLRHSTSKIRKVEDL---AHIASLGFRGEALSSISAVTRTELITKT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDV----GTTVVSRDLFYNQPVRRKYMQSSPKKVL 173
G R V++G G++ +D GTT + R LFYN P RRK++++ +
Sbjct: 116 KEDTFGTRYVIEG------GVEQSLEDAGAPDGTTFLVRQLFYNVPARRKFLKTPMTEAG 169
Query: 174 HSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA 233
H V+ ++R+AL HP+V+F FI+ + + T + ++ S +G E + L E++
Sbjct: 170 H-VQDLLMRLALSHPEVAFTFIN--NGQTKMRTSGNGKLKDVIYSIYGREAAANLIELDY 226
Query: 234 NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 282
+ L + GY+ P + + F+ ++N RYV + K + F
Sbjct: 227 SMDGLVMKGYLGKPVITRGNRNFENYFVNGRYVKNAMLSKAIEDAYKDF 275
Score = 41.6 bits (96), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 19/198 (9%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
K++ QV + + V +L +IDQHAA ER+ L E K + + YL L L
Sbjct: 476 KLIGQVFETYWLVEFENSLYIIDQHAAHERV-LYERTLKEMKNREFTAQYLSPPIILSLS 534
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLS 1285
Q+L ++ G+ I G + + A+P +FG+
Sbjct: 535 MQEAQVLNENMDRFTRIGF--EIEPFGGEEY--------------AVRAIPDNLFGIA-K 577
Query: 1286 DVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
LLE L LAD +S TP + + S +C+ A+ + L E ++ EL
Sbjct: 578 KELLLEMLDDLADGISTSMTPELIDEKVASMSCKAAVKGNNRLSAQEADALIGELLLLEN 637
Query: 1346 CFQCAHGRPTTVPLVNLE 1363
+ C HGRPT + + E
Sbjct: 638 PYHCPHGRPTIIAMTQRE 655
>gi|22124542|ref|NP_667965.1| DNA mismatch repair protein [Yersinia pestis KIM10+]
gi|45440381|ref|NP_991920.1| DNA mismatch repair protein [Yersinia pestis biovar Microtus str.
91001]
gi|51594775|ref|YP_068966.1| DNA mismatch repair protein [Yersinia pseudotuberculosis IP 32953]
gi|108809903|ref|YP_653819.1| DNA mismatch repair protein [Yersinia pestis Antiqua]
gi|108813460|ref|YP_649227.1| DNA mismatch repair protein [Yersinia pestis Nepal516]
gi|145600850|ref|YP_001164926.1| DNA mismatch repair protein [Yersinia pestis Pestoides F]
gi|150260585|ref|ZP_01917313.1| DNA mismatch repair protein [Yersinia pestis CA88-4125]
gi|165926767|ref|ZP_02222599.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165936468|ref|ZP_02225036.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011848|ref|ZP_02232746.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166213990|ref|ZP_02240025.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167400705|ref|ZP_02306214.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167418954|ref|ZP_02310707.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167423238|ref|ZP_02314991.1| DNA mismatch repair protein MutL [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167470469|ref|ZP_02335173.1| DNA mismatch repair protein MutL [Yersinia pestis FV-1]
gi|170026016|ref|YP_001722521.1| DNA mismatch repair protein [Yersinia pseudotuberculosis YPIII]
gi|186893782|ref|YP_001870894.1| DNA mismatch repair protein [Yersinia pseudotuberculosis PB1/+]
gi|218927574|ref|YP_002345449.1| DNA mismatch repair protein [Yersinia pestis CO92]
gi|229836631|ref|ZP_04456797.1| methyl-directed mismatch repair protein [Yersinia pestis Pestoides
A]
gi|229840243|ref|ZP_04460402.1| methyl-directed mismatch repair protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842321|ref|ZP_04462476.1| methyl-directed mismatch repair protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229903940|ref|ZP_04519053.1| methyl-directed mismatch repair protein [Yersinia pestis Nepal516]
gi|270489072|ref|ZP_06206146.1| DNA mismatch repair protein, C-terminal domain protein [Yersinia
pestis KIM D27]
gi|294502480|ref|YP_003566542.1| DNA mismatch repair protein [Yersinia pestis Z176003]
gi|384120914|ref|YP_005503534.1| DNA mismatch repair protein [Yersinia pestis D106004]
gi|384137647|ref|YP_005520349.1| DNA mismatch repair protein [Yersinia pestis A1122]
gi|420582582|ref|ZP_15076881.1| DNA mismatch repair protein mutL [Yersinia pestis PY-08]
gi|420614845|ref|ZP_15105859.1| DNA mismatch repair MutL family protein [Yersinia pestis PY-14]
gi|420652032|ref|ZP_15139291.1| DNA mismatch repair protein mutL [Yersinia pestis PY-34]
gi|420662815|ref|ZP_15148967.1| DNA mismatch repair protein mutL [Yersinia pestis PY-42]
gi|420700089|ref|ZP_15182292.1| DNA mismatch repair MutL family protein [Yersinia pestis PY-54]
gi|420782054|ref|ZP_15253889.1| DNA mismatch repair protein mutL [Yersinia pestis PY-89]
gi|420824657|ref|ZP_15292105.1| DNA mismatch repair protein mutL [Yersinia pestis PY-98]
gi|420851371|ref|ZP_15316194.1| DNA mismatch repair protein mutL [Yersinia pestis PY-103]
gi|421761799|ref|ZP_16198599.1| DNA mismatch repair protein [Yersinia pestis INS]
gi|20455102|sp|Q8ZIW4.1|MUTL_YERPE RecName: Full=DNA mismatch repair protein MutL
gi|81825958|sp|Q66FB7.1|MUTL_YERPS RecName: Full=DNA mismatch repair protein MutL
gi|123073158|sp|Q1CEF3.1|MUTL_YERPN RecName: Full=DNA mismatch repair protein MutL
gi|123245400|sp|Q1C0Z8.1|MUTL_YERPA RecName: Full=DNA mismatch repair protein MutL
gi|166232114|sp|A4TRP1.1|MUTL_YERPP RecName: Full=DNA mismatch repair protein MutL
gi|238688465|sp|B1JMP1.1|MUTL_YERPY RecName: Full=DNA mismatch repair protein MutL
gi|238691358|sp|B2K202.1|MUTL_YERPB RecName: Full=DNA mismatch repair protein MutL
gi|21957340|gb|AAM84216.1|AE013665_5 DNA mismatch repair protein [Yersinia pestis KIM10+]
gi|45435237|gb|AAS60797.1| DNA mismatch repair protein [Yersinia pestis biovar Microtus str.
91001]
gi|51588057|emb|CAH19663.1| DNA mismatch repair protein [Yersinia pseudotuberculosis IP 32953]
gi|108777108|gb|ABG19627.1| DNA mismatch repair protein MutL [Yersinia pestis Nepal516]
gi|108781816|gb|ABG15874.1| DNA mismatch repair protein MutL [Yersinia pestis Antiqua]
gi|115346185|emb|CAL19053.1| DNA mismatch repair protein [Yersinia pestis CO92]
gi|145212546|gb|ABP41953.1| DNA mismatch repair protein MutL [Yersinia pestis Pestoides F]
gi|149289993|gb|EDM40070.1| DNA mismatch repair protein [Yersinia pestis CA88-4125]
gi|165915584|gb|EDR34193.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis
str. IP275]
gi|165921390|gb|EDR38614.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989207|gb|EDR41508.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166204785|gb|EDR49265.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962948|gb|EDR58969.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050073|gb|EDR61481.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167057408|gb|EDR67154.1| DNA mismatch repair protein MutL [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169752550|gb|ACA70068.1| DNA mismatch repair protein MutL [Yersinia pseudotuberculosis
YPIII]
gi|186696808|gb|ACC87437.1| DNA mismatch repair protein MutL [Yersinia pseudotuberculosis
PB1/+]
gi|229679710|gb|EEO75813.1| methyl-directed mismatch repair protein [Yersinia pestis Nepal516]
gi|229690631|gb|EEO82685.1| methyl-directed mismatch repair protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696609|gb|EEO86656.1| methyl-directed mismatch repair protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706315|gb|EEO92323.1| methyl-directed mismatch repair protein [Yersinia pestis Pestoides
A]
gi|262360510|gb|ACY57231.1| DNA mismatch repair protein [Yersinia pestis D106004]
gi|270337576|gb|EFA48353.1| DNA mismatch repair protein, C-terminal domain protein [Yersinia
pestis KIM D27]
gi|294352939|gb|ADE63280.1| DNA mismatch repair protein [Yersinia pestis Z176003]
gi|342852776|gb|AEL71329.1| DNA mismatch repair protein [Yersinia pestis A1122]
gi|391466296|gb|EIR24383.1| DNA mismatch repair protein mutL [Yersinia pestis PY-08]
gi|391501358|gb|EIR55773.1| DNA mismatch repair MutL family protein [Yersinia pestis PY-14]
gi|391530972|gb|EIR82507.1| DNA mismatch repair protein mutL [Yersinia pestis PY-34]
gi|391546845|gb|EIR96798.1| DNA mismatch repair protein mutL [Yersinia pestis PY-42]
gi|391591919|gb|EIS36425.1| DNA mismatch repair MutL family protein [Yersinia pestis PY-54]
gi|391667357|gb|EIT02701.1| DNA mismatch repair protein mutL [Yersinia pestis PY-89]
gi|391704789|gb|EIT36417.1| DNA mismatch repair protein mutL [Yersinia pestis PY-98]
gi|391734005|gb|EIT62317.1| DNA mismatch repair protein mutL [Yersinia pestis PY-103]
gi|411178121|gb|EKS48133.1| DNA mismatch repair protein [Yersinia pestis INS]
Length = 635
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 173/349 (49%), Gaps = 32/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
IS+D L L RHATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISKDDLALALARHATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLA----LLISSFGIEDFSFLDEVNANDGAL 238
IAL V+ I++ +L+ ++ A L S G + G L
Sbjct: 178 IALARFDVA---INLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S ++ QY Y+N+R + +L+NH A + +
Sbjct: 235 NIHGWVADPAASHTLSEMQYCYVNNRMMRD----RLINH------------AIRQAYQDR 278
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
+ +Q PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 279 LNDAQQ-PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|153947725|ref|YP_001402609.1| DNA mismatch repair protein [Yersinia pseudotuberculosis IP 31758]
gi|167012380|sp|A7FMY1.1|MUTL_YERP3 RecName: Full=DNA mismatch repair protein MutL
gi|152959220|gb|ABS46681.1| DNA mismatch repair protein MutL [Yersinia pseudotuberculosis IP
31758]
Length = 635
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 173/349 (49%), Gaps = 32/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
IS+D L L RHATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISKDDLALALARHATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLA----LLISSFGIEDFSFLDEVNANDGAL 238
IAL V+ I++ +L+ ++ A L S G + G L
Sbjct: 178 IALARFDVA---INLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S ++ QY Y+N+R + +L+NH A + +
Sbjct: 235 NIHGWVADPAASHTLSEMQYCYVNNRMMRD----RLINH------------AIRQAYQDR 278
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
+ +Q PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 279 LNDAQQ-PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|420260835|ref|ZP_14763504.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404511673|gb|EKA25539.1| DNA mismatch repair protein [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 635
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 187/380 (49%), Gaps = 36/380 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGA+++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARHATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQNE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
IAL V+ I++ +L+ S L S G ++ G L
Sbjct: 178 IALARFDVA---INLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S ++ QY Y+N+R + +L+NH +A LK
Sbjct: 235 TIRGWVADPAASRTLSEMQYCYVNNRMMRD----RLINHAIR--------QAYQDLLKDD 282
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 283 QQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQTATP 335
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+++ ED E +E+ R+Q
Sbjct: 336 LLNIN--EDGE-EIEAPRWQ 352
>gi|408492450|ref|YP_006868819.1| DNA mismatch repair protein MutL [Psychroflexus torquis ATCC
700755]
gi|408469725|gb|AFU70069.1| DNA mismatch repair protein MutL [Psychroflexus torquis ATCC
700755]
Length = 615
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 173/351 (49%), Gaps = 39/351 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDA AT V + + ++VVD+GSG
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELMENAVDANATLVSLIIKEGGKTLIQVVDNGSG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ L ERHATSK+ +D + T GFRGEALASI+ VS +++ TK
Sbjct: 65 MTDTDARLSFERHATSKI---KAAEDLFHLHTKGFRGEALASIAAVSHVDMKTKTEVEEV 121
Query: 123 GYRKVMKGSK------CLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G +++GS C+ +GT++ ++LF+N P RR +++S+ + H +
Sbjct: 122 GTHLMVEGSHITQQEPCV--------TPIGTSISVKNLFFNIPARRNFLKSASVEHKHVI 173
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R+ALVHP V+FKFI +SE L ++ ++ G + L V
Sbjct: 174 DEF-QRVALVHPSVAFKFIHNDSE---LFNLPVANFRHRIVGVMGSKMNEKLVPVKEETD 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+++ G++ P + + Q+ ++N R++ H L+H +S A G LK
Sbjct: 230 LIQLYGFVGKPEFAKKSRGEQFFFVNDRFIK----HPYLHHAVSS--------AFEGLLK 277
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
K A P Y L L+ D+ P KT V F + + + + +++
Sbjct: 278 DK-----AYPTYFLYLQVNPESIDINIHPTKTEVKFDNEHAIYSILRSSVK 323
>gi|395801869|ref|ZP_10481124.1| DNA mismatch repair protein MutL [Flavobacterium sp. F52]
gi|395436058|gb|EJG01997.1| DNA mismatch repair protein MutL [Flavobacterium sp. F52]
Length = 645
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 165/345 (47%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N+VDA AT + + V+V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAVDAKATDIKLIIKDAGKSLVQVIDNGVG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ L RHATSK+ D+ +GT GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MTVTDARLCFARHATSKIRQAEDL---FSLGTKGFRGEALASIAAIAHMEMKTKQDQDEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G +++GSK + + K GT+ ++LF+N P RR +++S + H V R
Sbjct: 122 GTHIIIEGSKFISQEVAVLPK--GTSFAVKNLFFNIPARRNFLKSDTVEFRH-VMDEFQR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP + F F SE L + ++S E L VN + I G
Sbjct: 179 VALAHPNIHFSFYHNGSEMYNLPAAGYRQRIVGIMSGKTNEK---LVPVNEETDIISIQG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + + Q+ ++N R++ +H H S A +G LK
Sbjct: 236 FVCKPEFAKKNRGEQFFFVNDRFIKSSYLH----HAVMS--------AYDGLLKDG---- 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ P+Y L L+ P + D+ P KT + F D + + A + +I+
Sbjct: 280 -SQPSYFLYLQVPPNTIDINIHPTKTEIKFDDEQALYAILRASIK 323
>gi|225419752|ref|ZP_03762055.1| hypothetical protein CLOSTASPAR_06090, partial [Clostridium
asparagiforme DSM 15981]
gi|225041589|gb|EEG51835.1| hypothetical protein CLOSTASPAR_06090 [Clostridium asparagiforme
DSM 15981]
Length = 326
Score = 132 bits (332), Expect = 1e-27, Method: Composition-based stats.
Identities = 97/350 (27%), Positives = 169/350 (48%), Gaps = 26/350 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
M I L + N + +G V+ VV+EL+ N++DA AT V + + ++V D+
Sbjct: 1 MANITVLDQNTINKIAAGEVIERPASVVKELLENAIDAQATAVTIEIKEGGTTLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI +D + L RHATSK+ ++D + + GFRGEALASI+ V+ +E+ITK
Sbjct: 61 GCGIPKDQISLAFLRHATSKI---KSVEDLFTVSSLGFRGEALASIAAVAQVELITKTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G+R ++G G+++ GTT ++R+LFYN P R+K+++ P V
Sbjct: 118 SLTGFRYQIEGGT--ERGLEEVGAPDGTTFIARNLFYNTPARKKFLK-RPVTEGAYVADL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V +IAL HP++S +FI ++ L T + + L+ + +G E + L ++ ++
Sbjct: 175 VEKIALSHPEISIRFI--QNNQNKLYTSGNHNLRDLVYTVYGREVTANLLPIDVQAQDIK 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SG+I P + + ++ +IN RY+ I + + + +
Sbjct: 233 VSGFIGKPLIARGNRNYENYFINGRYIKSSIISRAIEEAYKPYMMQHKY----------- 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P LL+ D+ P K + F+D E + + A+ A
Sbjct: 282 ------PFTLLHFSIEPEFLDVNVHPTKMELRFRDGELMFKTVLNAVGEA 325
>gi|429118421|ref|ZP_19179185.1| DNA mismatch repair protein MutL [Cronobacter sakazakii 680]
gi|426327098|emb|CCK09922.1| DNA mismatch repair protein MutL [Cronobacter sakazakii 680]
Length = 635
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 180/380 (47%), Gaps = 37/380 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGA ++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGARRIDIDIERGGAKLIRIRDNGGG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMEVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA---NDGALE 239
IAL V+ ++P + S I +FL+ A G L
Sbjct: 178 IALARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGS--ICGPAFLEHALAIAWQHGDLA 235
Query: 240 ISGYISSPYDSISVKA-FQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G+++ P + + A QY Y+N R + +L+NH A C D +
Sbjct: 236 LRGWVAEPKGTTAALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGIDQQ----- 285
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
PAY+L L PH + D+ P K V F V FI + + S ++ A+
Sbjct: 286 -------PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAAN- 336
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+ + E AE ++ RFQ
Sbjct: 337 --PLSLNEPAE---DAPRFQ 351
>gi|295100784|emb|CBK98329.1| DNA mismatch repair protein MutL [Faecalibacterium prausnitzii
L2-6]
Length = 717
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 166/351 (47%), Gaps = 28/351 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ L + + +G V+ VV+EL+ NS+DAGA+++ V + +++ D+
Sbjct: 1 MAEIHVLDKHTAELIAAGEVVERPASVVKELLENSIDAGASQITVSIESGGVRLIEISDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G+GI + RHATSK+ DD T I T GFRGEALASI+ V+ +E++T+
Sbjct: 61 GTGIEAKYIPTAFIRHATSKI---RTEDDLTSIHTLGFRGEALASIASVARVEVLTRTEA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
++G + I+ + VGTT+ DLF+N P R K+++ + V
Sbjct: 118 DECASLYRIEGGE--EQPIEPGARGVGTTIRVYDLFFNTPARMKFLKKDSSEGTF-VADV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPL-ALLISSFGIEDFSFLDEVNANDGAL 238
V +AL HP+VSFKFI E +L L + + G E L EV+ +G
Sbjct: 175 VGHLALSHPEVSFKFI---REGKLQYVTPGDGQLRSAAYAVLGREFSRDLVEVDNREGVY 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G I+ P + ++ QY YIN RYV ++ + +F + ++GK
Sbjct: 232 RVWGLITQPRSCRASRSMQYFYINGRYVRN---RTMMAGMEMAFKGT--------MMQGK 280
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P +L L P L D+ P KT V F + + A++ A
Sbjct: 281 ------FPGGILLLEMPADLVDVNVHPAKTEVRFARENDIFDLVYHAVKLA 325
Score = 42.4 bits (98), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 87/217 (40%), Gaps = 37/217 (17%)
Query: 1164 EDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQEL 1223
E + + ++ + +I G + +ID+HAA ER E+L + Y D +L
Sbjct: 529 EPLRYVGEIFRTYILAERGDEICIIDKHAAHERQLFEKL----------AAHYGDVPSQL 578
Query: 1224 VLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQ--------ITVITLLA 1275
+L + + I + + NL+LL+ + + L +
Sbjct: 579 LLEPL-----------------VVEISAEEKTALLTNLDLLESAGLEVSDFGGSSVCLRS 621
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1335
VP ++ L+E +LA + + VL+S +CR AI GD P E
Sbjct: 622 VPADVEQGSAEDLLVELAAKLAHGSRDALNERTEW-VLHSISCRAAIKAGDHTSPQELMA 680
Query: 1336 IVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1372
+ E++ + C HGRP + L E L KQ ++
Sbjct: 681 LAEKILSGEVPPFCPHGRPCVLKLTRKE-LEKQFGRI 716
>gi|162418239|ref|YP_001605281.1| DNA mismatch repair protein [Yersinia pestis Angola]
gi|238687244|sp|A9QYN3.1|MUTL_YERPG RecName: Full=DNA mismatch repair protein MutL
gi|162351054|gb|ABX85002.1| DNA mismatch repair protein MutL [Yersinia pestis Angola]
Length = 635
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 173/349 (49%), Gaps = 32/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
IS+D L L RHATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISKDDLALALARHATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLA----LLISSFGIEDFSFLDEVNANDGAL 238
IAL V+ I++ +L+ ++ A L S G + G L
Sbjct: 178 IALARFDVA---INLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S ++ QY Y+N+R + +L+NH A + +
Sbjct: 235 NIHGWVADPAASHTLSEMQYCYVNNRMMRD----RLINH------------AIRQAYQDR 278
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
+ +Q PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 279 LNDAQQ-PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|153814909|ref|ZP_01967577.1| hypothetical protein RUMTOR_01124 [Ruminococcus torques ATCC 27756]
gi|145847940|gb|EDK24858.1| DNA mismatch repair domain protein [Ruminococcus torques ATCC
27756]
Length = 705
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 209/448 (46%), Gaps = 44/448 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ +V+ELV N++DA AT V V + G+ +++V
Sbjct: 14 MPHIQVLDQITIDKIAAGEVIERPASIVKELVENAIDAKATSVTVEIKDGGIS--FIRVT 71
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI D + RH+TSK+ ++ I + GFRGEAL+SI+ V+ E+ITK
Sbjct: 72 DNGCGIEADEVRCAFLRHSTSKI---RTAEELVSIHSLGFRGEALSSIAAVTRTEVITKT 128
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
+G + V++G K L ++ GTT + LFYN P RRK++++ + H V+
Sbjct: 129 EEGQSGIKYVIEGGKETAL--EETGAPNGTTFLIHQLFYNIPARRKFLKTPVTEAGH-VQ 185
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
++ +AL HP+VSF FI+ + E L T + ++ + +G E S L E++
Sbjct: 186 DLLIHLALSHPEVSFLFIN--NGQEKLRTSGNGKLKDVIYNVYGREVTSNLLELDYKKDG 243
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
L ISG++ P + + F+ ++N RYV + K L F +
Sbjct: 244 LSISGFLGKPVITRGNRNFENFFVNGRYVKSAMLSKSLEDAYKDFTMQHKF--------- 294
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
P +L+ + L D+ P K + F+ + V + A+ +
Sbjct: 295 --------PFAVLHFQVEGDLIDVNVHPTKMELRFQRQQEVYNTMYEAVHRRLL------ 340
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHL------HSSPLKNLAKQRDHMFHKECERITFQ 411
+ ++++ A +P + Q + S L ++ + K R+ M +E E++ +
Sbjct: 341 --EPELIQTATVPDPADAAQKKKESPFLLKPKSIENTKYDPIEKIREKMQEREPEQVREK 398
Query: 412 EFQKDPVELAEENTEMEFFSQPKHSSSL 439
+ P ++ E+ + E K +S++
Sbjct: 399 AQETKPEQVREKVQDEEQGQARKQTSAI 426
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 1184 TLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDW 1243
+L +IDQHAA ER+ E ++ S E S YL L L QLL+ ++
Sbjct: 534 SLYIIDQHAAHERVMYERTLKEMKSREYTS-QYLSPPIILSLSMQEAQLLEEHIDRFTRI 592
Query: 1244 GWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGS 1302
G+ I G + + AVP +FG+ ++ L+E + LAD +
Sbjct: 593 GF--EIEHFGGEEY--------------AVRAVPDNLFGIAKKEL-LMEMIDDLADGINT 635
Query: 1303 STTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1362
S TP + + S +C+ A+ + L E ++ EL + C HGRPT + +
Sbjct: 636 SMTPDLIDEKVASMSCKAAVKGNNRLSAKEVDALIGELLTLDNPYHCPHGRPTIIAMTKR 695
Query: 1363 E 1363
E
Sbjct: 696 E 696
>gi|417006481|ref|ZP_11945051.1| DNA mismatch repair protein [Streptococcus agalactiae FSL S3-026]
gi|341576662|gb|EGS27073.1| DNA mismatch repair protein [Streptococcus agalactiae FSL S3-026]
Length = 657
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 169/354 (47%), Gaps = 40/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 1 MSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + VL RHATSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 61 GEGMTSEDAVLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATEQ 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++ H
Sbjct: 118 GKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ + R++L HP+V+F I+ E+ T + + +G+ + E++
Sbjct: 171 II-DIINRLSLAHPEVAFTLIN--DGKEMTKTSGTGDLRQAIAGIYGLNTAKKMIEISNA 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 228 DLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRSI 268
Query: 295 LKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 269 LDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISSAI 322
>gi|414564974|ref|YP_006043935.1| DNA mismatch repair protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338848039|gb|AEJ26251.1| DNA mismatch repair protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 660
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 191/413 (46%), Gaps = 45/413 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M TI LPE + N + +G V+ VV+ELV N++DA ++++ V + +++ D+
Sbjct: 1 MTTIIELPEVLANQIAAGEVIERPASVVKELVENAIDAKSSQITVEIEESGLKMIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + L L RHATSK+ +D+ I T GFRGEAL S++ +S L I T
Sbjct: 61 GEGMSHEDLPLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSVASISKLTIKTATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G V G K L + VGT + +LFYN P R KYM+S ++ H V
Sbjct: 118 AEHGSILVASGGKIEQL--EAVSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHVV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPL-ALLISSFGIEDFSFLDEVNANDGAL 238
V R++L HP+++F I S+ + L S + L L +G+ + ++++ D
Sbjct: 175 VNRLSLAHPEIAFTLI---SDGKQLTQTSGTGDLRQALAGIYGLNTAKKMIDISSADLDF 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
E+ G++S P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVGGFVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 272
Query: 299 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
SK P +++++ L D+ P K + ++A I AI + ++
Sbjct: 273 GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEIRISKERELMALISTAISESLREQ--- 329
Query: 357 DSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC 405
D++ DA L S +S Q+S L S L Q++ F KE
Sbjct: 330 -----DLIPDALENLARSSTRSFSKPEQTSLPLQPSQLY-YDPQKNDFFTKET 376
>gi|365836705|ref|ZP_09378092.1| DNA mismatch repair protein [Hafnia alvei ATCC 51873]
gi|364563387|gb|EHM41196.1| DNA mismatch repair protein [Hafnia alvei ATCC 51873]
Length = 639
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 164/348 (47%), Gaps = 26/348 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I++D L L RHATSK + +DD I + GFRGEALAS+S VS L + ++ +
Sbjct: 63 INKDELALALARHATSK---ITSLDDLEAIMSLGFRGEALASVSSVSRLTMTSRTAEQNE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTTV DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTVKPAAHPVGTTVEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKF-IDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
IAL V+ + + + + L S G E+ G L I
Sbjct: 178 IALARFDVTIQLHHNGKMIRQYRAVKEDGQKDRRLGSICGTAFIQHALEIKWEHGDLAIH 237
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G+++ P S + QY Y+N R + KL+ H A D K +
Sbjct: 238 GWVADPVGSRQLTEMQYSYVNGRMMRD----KLITH-AIRQAYQDQLKDDQQ-------- 284
Query: 302 SQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 348
PAY+L L PH + D+ P K V F V FI +A+ S
Sbjct: 285 ----PAYVLYLTVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVIS 327
>gi|124267220|ref|YP_001021224.1| DNA mismatch repair protein MutL [Methylibium petroleiphilum PM1]
gi|124259995|gb|ABM94989.1| DNA mismatch repair protein MutL [Methylibium petroleiphilum PM1]
Length = 604
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 164/337 (48%), Gaps = 32/337 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVV-DDGSG 62
I LP+ + + + +G V+ VV ELV N++DAGA ++ V + +V DDG+G
Sbjct: 14 IRELPDELVSQIAAGEVVERPASVVRELVDNALDAGAREIVVKLMAGGVRAILVEDDGAG 73
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I L L +RHATSK +A +D+ + T GFRGEALA+I+ VS L I ++ P+
Sbjct: 74 IPASELPLALKRHATSK---IASLDELENVSTMGFRGEALAAIAAVSELSIASRHADAPH 130
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
R + + + + VGT+V R+LF++ P RRK++++ ++ H + + V R
Sbjct: 131 AQRLDARSGELVPAA-----RGVGTSVEVRELFFSTPARRKFLKTDATELAHCL-EAVRR 184
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDF-SFLDEVNANDGALEIS 241
AL P V F + E +LL +PL I EDF + EV A L IS
Sbjct: 185 HALARPDVGFA---VWHEGKLLAQW-RRAPLEQRIRDALGEDFMAHSREVTAQPTGLRIS 240
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G I P + + QYVY+N R+V +L++H A L G R
Sbjct: 241 GRIGLPDAARARADEQYVYVNGRHVRD----RLISH--------GLRTAYADVLHGGRQ- 287
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPV 338
P+Y+L + S D+ P K V F+D V
Sbjct: 288 ----PSYVLFIEIAPSRVDVNVHPTKIEVRFRDGREV 320
Score = 40.4 bits (93), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 71/189 (37%), Gaps = 17/189 (8%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
+ L Q+ +I L ++D HAA ER+ E L+ + +S Q L++P
Sbjct: 416 RALAQLGGVYILAENRDGLVIVDMHAAHERVVYERLKAGLAGARIES-------QPLLIP 468
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1286
I A + + L+L V+ L + P
Sbjct: 469 AIFPATAAEVATAEAQVETLARL----------GLDLTVLSSNVLALRSHPAALAGGDMV 518
Query: 1287 VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1346
L +LA D S + +L+S AC GA+ L E ++ ++++T
Sbjct: 519 ALARSVLAELARYDASHAIERAQHELLSSMACHGAVRANRRLSVEEMNALLRDMERTERA 578
Query: 1347 FQCAHGRPT 1355
QC HGRPT
Sbjct: 579 DQCNHGRPT 587
>gi|449886730|ref|ZP_21786395.1| DNA mismatch repair protein [Streptococcus mutans SA41]
gi|450076209|ref|ZP_21849746.1| DNA mismatch repair protein [Streptococcus mutans N3209]
gi|449212793|gb|EMC13144.1| DNA mismatch repair protein [Streptococcus mutans N3209]
gi|449253807|gb|EMC51745.1| DNA mismatch repair protein [Streptococcus mutans SA41]
Length = 651
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|450040379|ref|ZP_21836772.1| DNA mismatch repair protein [Streptococcus mutans T4]
gi|449199020|gb|EMC00105.1| DNA mismatch repair protein [Streptococcus mutans T4]
Length = 651
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|406829998|ref|ZP_11089592.1| DNA mismatch repair protein MutL [Schlesneria paludicola DSM 18645]
Length = 685
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 191/406 (47%), Gaps = 45/406 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDD 59
M I +L +V N + +G V+ V++EL+ NSVDA AT++ V V + +++VDD
Sbjct: 1 MSRIQQLSTSVINKIAAGEVIERPASVIKELLENSVDALATRIEVDVVAGGSELIRIVDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI D L+L HATSK+ + DD G+ T GFRGEALAS+++VS L I ++
Sbjct: 61 GEGIHPDDLLLAVSSHATSKI---RNADDLFGVQTMGFRGEALASVAEVSRLRIRSRQAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERK---DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G+ V+ + + R+ +GT + R+LF N PVRRK++++ + H +
Sbjct: 118 AAHGHELVVNLGEVV-----PPRECGCPLGTQIEVRNLFENTPVRRKFLKTVSTEFGH-I 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTC-SSSSPLALLISSFGIEDFSFLDEVNAND 235
+ R+AL + ++ + D+L+ +S PL L FG + L V ++
Sbjct: 172 SEHFTRVALANSRLHMV---LRHNDKLVMELPASPKPLDRLRIFFGKDVADELIPVESDQ 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
G + + GY+ P S + + QY+++N R++ L + L + G L
Sbjct: 229 GGVRMWGYVGHPNTSKATRKMQYLFLNGRWITD---RSLFHALTEGY---------RGLL 276
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
R P L + P D+ P K V F+D + + + IRS ++
Sbjct: 277 MVGRQ-----PVCFLYIELPPDRVDVNVHPTKVEVRFQDSQQLFRQLLAMIRSKFLS--- 328
Query: 356 HDSFDVDMLEDAELPLESSRFQSHQSSTHLHS---SPLKNLAKQRD 398
+D+ LP + + L SP++ + KQR+
Sbjct: 329 -----MDLQSQLRLPATPAGGSGGAAPGLLSGFSPSPVRPIEKQRE 369
Score = 49.7 bits (117), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 30/211 (14%)
Query: 1171 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1230
QV ++ V + VIDQHA ERI E LR +VL+G +S L + V +
Sbjct: 497 QVHDCYLIVETPEGVTVIDQHALHERIMYEHLRTRVLAGSVESQRLLVPQPIEVTSKEAA 556
Query: 1231 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1290
LL++ + ++ G G F ++ R + L VDL
Sbjct: 557 MLLEH-RDSLERAGL-------GVEDFGNGTVIVNR-------------YPAMLRKVDLQ 595
Query: 1291 EFLQQLAD---TDGSSTTPPSVLR-----VLNSKACRGAIMFGDSLLPSECALIVEELKQ 1342
E ++ L D + GS+ R +L+ +C+ A+ G L P E ++ +
Sbjct: 596 ELVRDLIDKLESGGSAGVQSGARRDILDELLHMMSCKAAVKAGQRLSPEEIESLLMQRHL 655
Query: 1343 TSLCFQCAHGRPTTVPLVNLEALHKQIAQLN 1373
C HGRPT + L E L +Q +L
Sbjct: 656 VDDAHHCPHGRPTALSLSRAE-LDRQFGRLG 685
>gi|449999925|ref|ZP_21824800.1| DNA mismatch repair protein [Streptococcus mutans N29]
gi|449186345|gb|EMB88180.1| DNA mismatch repair protein [Streptococcus mutans N29]
Length = 651
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|450051788|ref|ZP_21841025.1| DNA mismatch repair protein [Streptococcus mutans NFSM1]
gi|449201602|gb|EMC02592.1| DNA mismatch repair protein [Streptococcus mutans NFSM1]
Length = 651
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|449964620|ref|ZP_21811408.1| DNA mismatch repair protein [Streptococcus mutans 15VF2]
gi|449172344|gb|EMB74974.1| DNA mismatch repair protein [Streptococcus mutans 15VF2]
Length = 651
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|410495885|ref|YP_006905731.1| DNA mismatch repair protein mutL [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|410441045|emb|CCI63673.1| DNA mismatch repair protein mutL [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 660
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 192/416 (46%), Gaps = 49/416 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA +++V + + +++ D+
Sbjct: 1 MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQVTIDIEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + L L RHATSK+ +D+ I T GFRGEAL S++ +S + I T
Sbjct: 61 GEGMSPEDLPLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSVASISKITIKTATKE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G V G + L ++ VGT + +LFYN P R KYM+S ++ H V
Sbjct: 118 DNHGSLLVAIGGEIETL--EETSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGAL 238
V R++L HP+VSF I S+ L S + L I+ +G+ + ++ D
Sbjct: 175 VNRLSLAHPEVSFILI---SDGRQLTQTSGTGDLRQAIAGIYGLNTAKKMIAISNADLDF 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
E+SGY+S P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVSGYVSLPELTRANRNYMTILINGRYI-------------------KNFLLNRAILDGY 272
Query: 299 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
SK P +++++ L D+ P K V ++A I AI + ++
Sbjct: 273 GSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKERELMALISTAISESLKEQ--- 329
Query: 357 DSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLKNLA----KQRDHMFHKECE 406
D++ DA L S+R S T L PL++ QR+ F KE +
Sbjct: 330 -----DLIPDALENLAKSSTRHFSKPEQTQL---PLQSKGLYYDPQRNDFFVKESD 377
>gi|374708567|ref|ZP_09713001.1| DNA mismatch repair protein [Sporolactobacillus inulinus CASD]
Length = 619
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 172/355 (48%), Gaps = 29/355 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I RL E + N + +G V+ VV+ELV N++DA A+ V + + +KV DD
Sbjct: 1 MGVIKRLSETLANKIAAGEVVERPASVVKELVENAIDAEASSVLIEIEEGGLKSMKVTDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G + + + ERHATSK+ +D+ I T GFRGEAL SIS VS LE +T + G
Sbjct: 61 GRGFAPEDCRIAFERHATSKIHEDSDL---FHIATLGFRGEALPSISAVSHLE-LTTSDG 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G V++G + G+ R+ GT++ LFYN P R KY++S + L +
Sbjct: 117 EHPGTHLVLQGGHVIADGLAQSRR--GTSIKVEGLFYNTPARLKYLKSIHTE-LGKMTDV 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDGAL 238
V R+AL +P V F I E + + + S L+ +L + +G+ +
Sbjct: 174 VNRMALAYPHVRFTLIH---EQKTIFQSNGSGQLSHVLAAIYGVRTAKAAFPFSGKSLDF 230
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++ G P S + + + Y++IN+R++ PI N + + + + G+
Sbjct: 231 KVEGLAVHPQISRAGRQYVYIFINNRFIRNYPI---FNSIMDGY--------HTLMMIGR 279
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P +L+++ SL D+ P K + + A I +IRSA+ ++
Sbjct: 280 ------YPICVLHIQMDPSLVDVNVHPAKLEARISKEKELCALISESIRSAFHRE 328
Score = 47.0 bits (110), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 22/188 (11%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGE-GKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDW 1243
L +IDQHAA ERI+ E R KV GE + V L Y+ + + + +++
Sbjct: 450 LYIIDQHAAQERIKYEFFREKV--GETAREVQQLLVPMTFDFSASEYETVTEYQDYLQEI 507
Query: 1244 GWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSS 1303
G N + G+RS + + + P + + + + QL +T G
Sbjct: 508 GL--NFESFGTRS--------------LIIRSYPTWLPEGREEEMINDIVHQLIET-GKV 550
Query: 1304 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV--N 1361
+ ++ AC+ +I L P E +++ L + F C HGRP V
Sbjct: 551 SIKKLREKLAKMMACKRSIKANHYLRPDEIQALLDSLSKAQDPFTCPHGRPVLVHFTPYE 610
Query: 1362 LEALHKQI 1369
+E + K+I
Sbjct: 611 MEKMFKRI 618
>gi|334340544|ref|YP_004545524.1| DNA mismatch repair protein MutL [Desulfotomaculum ruminis DSM
2154]
gi|334091898|gb|AEG60238.1| DNA mismatch repair protein MutL [Desulfotomaculum ruminis DSM
2154]
Length = 637
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 144/270 (53%), Gaps = 15/270 (5%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L EA N + +G V+ V +ELV NS+DAGA+++ V + G+ +KV+
Sbjct: 1 MSKIQVLDEATANQIAAGEVVERPVSVAKELVENSLDAGASRITVELIQGGLSG--IKVI 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+GSG+S + L +RHATSK+ D+ T I T GFRGEAL SI+ V+ + ++T+
Sbjct: 59 DNGSGMSPEDAKLCFQRHATSKIKTAGDL---TRILTLGFRGEALPSIASVAKVALVTRT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G M+G + L + VGTT+ ++LFYN P RRK+++ SP +
Sbjct: 116 RDDLAGTEVRMEGGQL--LSVSPAGCPVGTTIDVQELFYNTPARRKHLK-SPNAEAGQIS 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELL-CTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
++AL P V +++ S ++ C+ + S S FG ++ + E+N
Sbjct: 173 DLFAKLALARPDVR---MELRSNGRVIFCSPGNGSLRDAAASVFGPDNVRSMIEMNHQGR 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYV 266
L I G+IS P + + + +Q YIN RY+
Sbjct: 230 LLTIRGFISKPVLTRASRQYQNFYINQRYI 259
Score = 45.8 bits (107), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 29/203 (14%)
Query: 1171 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 1230
QV ++ G+L +IDQHAA ER+ E+ + ++ G + E V +I Y
Sbjct: 456 QVFPTYVLAQGEGSLYIIDQHAAHERVFYEKYKEQLTRGVQSQMLL-----EPVPLDIPY 510
Query: 1231 QLLQNFAEQI---KDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDV 1287
LQ + D G++ F + LL+ VP G V
Sbjct: 511 HHLQRLIANVVALSDMGFVVE-------HFGGDTFLLR---------GVPP--GTTEKPV 552
Query: 1288 DL-LEFLQQLADTDGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1345
+L ++ L +L D+ ++ R+ + ACR A+ G L E ++E L +
Sbjct: 553 ELFMDLLDRLQDSPAEQLDNSLMIDRLAAAMACRDAVKAGTRLGHKEIQSLLEGLSRCHS 612
Query: 1346 CFQCAHGRPTTVPLVNLEALHKQ 1368
+ C HGRPT + + E L+K+
Sbjct: 613 PYTCPHGRPTLIQITQ-EELNKR 634
>gi|450120896|ref|ZP_21865983.1| DNA mismatch repair protein [Streptococcus mutans ST6]
gi|449229790|gb|EMC29085.1| DNA mismatch repair protein [Streptococcus mutans ST6]
Length = 651
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVVNRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|449981701|ref|ZP_21817906.1| DNA mismatch repair protein [Streptococcus mutans 5SM3]
gi|449175597|gb|EMB78003.1| DNA mismatch repair protein [Streptococcus mutans 5SM3]
Length = 651
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|312130605|ref|YP_003997945.1| DNA mismatch repair protein mutl [Leadbetterella byssophila DSM
17132]
gi|311907151|gb|ADQ17592.1| DNA mismatch repair protein MutL [Leadbetterella byssophila DSM
17132]
Length = 602
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 173/355 (48%), Gaps = 37/355 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDD 59
M I L +A+ N + +G V+ VV+EL+ NS+DAGA + + V ++V+DD
Sbjct: 1 MDKIKLLSDAIANQIAAGEVVQRPASVVKELLENSIDAGALNLKLIVKESGKTLIQVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSG+S + ERHATSK+ D+ I T GFRGEALASI+ V+ +E+ T+
Sbjct: 61 GSGMSPTDARMSFERHATSKIKESIDL---FNIRTMGFRGEALASIAAVAQVEMKTRREE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G ++GS+ + K GT++ ++LF+N P RRK+++S+P ++ H +++
Sbjct: 118 DEVGTLIRIEGSEVVEQDFIQAAK--GTSIAVKNLFFNVPARRKFLKSNPVEMKHIIEEF 175
Query: 180 VLRIALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEV---NAN 234
R+AL HP VSF D+E + S AL D S+ D++
Sbjct: 176 -QRVALAHPDVSFILYHNDIEVMNLPAARLSKRITDAL--------DKSYRDQLAKCEIE 226
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
++I+GY+ P + K QY ++N R++ +H + + +F+ + +
Sbjct: 227 TDVVKITGYVGKPQSAKKTKGDQYFFVNKRFIKSNYLH---HAVVNAFESAIPEGTH--- 280
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P Y L L D+ P KT + F + + + A + A++ +
Sbjct: 281 -----------PFYTLFLEIHPENIDINIHPTKTEIKFDNEQLIYAVLRSAVKQS 324
>gi|304404424|ref|ZP_07386085.1| DNA mismatch repair protein MutL [Paenibacillus curdlanolyticus
YK9]
gi|304346231|gb|EFM12064.1| DNA mismatch repair protein MutL [Paenibacillus curdlanolyticus
YK9]
Length = 684
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 169/363 (46%), Gaps = 36/363 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV--GVCNCYVKVVD 58
MG I L E + N + +G V+ VV+ELV N+VDAGAT + + + G N ++V+D
Sbjct: 1 MGNIRVLDEQLANQIAAGEVVERPASVVKELVENAVDAGATTIDLTIEEGGLNL-IRVID 59
Query: 59 DGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 118
+G+GI D + +RHATSKL AD+ I + GFRGEAL SI+ VS + I+
Sbjct: 60 NGAGIEPDEIETAFQRHATSKLLSSADLFR---IASLGFRGEALPSIAAVSRVTCISSPT 116
Query: 119 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G + V++G G + GT + RDLFYN P R KYM+S ++ H +
Sbjct: 117 KDGLGKQLVIEGGTVQQSGPVSAPQ--GTEMSVRDLFYNTPARLKYMKSIQTELGH-ISD 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
V RIAL HP ++F + +ELL T + L ++ + +G + V
Sbjct: 174 YVNRIALAHPGIAFSL--KHNGNELLRTPGTGDRLQVIAAVYGTSTAKAMLPVEGETPDY 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
++GY+S P + + + V +N RY+ S+ N L+G
Sbjct: 232 VLTGYVSKPELTRANRNAITVIVNGRYI-------------------RSFLVNQALLQGY 272
Query: 299 RS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
+ P L + SL D+ P K V F + IE++++ K +
Sbjct: 273 HTLLPINRFPLVTLEIAMHPSLLDVNVHPSKMEVRFSKETELRELIEQSVK----KTLGR 328
Query: 357 DSF 359
D +
Sbjct: 329 DRY 331
>gi|400291072|ref|ZP_10793099.1| DNA mismatch repair protein [Streptococcus ratti FA-1 = DSM 20564]
gi|399921863|gb|EJN94680.1| DNA mismatch repair protein [Streptococcus ratti FA-1 = DSM 20564]
Length = 651
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 192/418 (45%), Gaps = 55/418 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ V + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPASVVKELVENAIDAASSQITVDIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ + + RHATSK+ AD+ I T GFRGEAL SI+ VS L I T +
Sbjct: 61 GQGMEQADAAMSLHRHATSKIKSQADL---FRIRTLGFRGEALPSIASVSRLSIKTASDR 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + G K E+++ VGT + DLF+N P R KYM+S ++ H
Sbjct: 118 ESYGTFLLANGGKV-------EKEEAVSTPVGTKITVEDLFFNTPARLKYMKSLQAELAH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ + R++L HP+++F I+ EL+ T + + +G+ + E++
Sbjct: 171 II-DVLNRLSLAHPEIAFTLIN--DGRELIRTSGNGDLRQAIAGIYGLNTAKKMIEISNA 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
D E+SGYIS P + + + + + IN RY+ ++ N
Sbjct: 228 DLDFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAI 268
Query: 295 LKGKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
L G SK P +++++ L D+ P K V + ++ I AI + K
Sbjct: 269 LDGYGSKLMVGRFPIAIIDIQIDPYLADVNVHPTKQEVRISKEKELMQLISLAIAESLRK 328
Query: 353 KIAHDSFDVDMLEDA-ELPLESSRFQSHQSSTHLHSSPLKNLA----KQRDHMFHKEC 405
+ D++ DA E +SS + +H++ S PLK K ++ F KE
Sbjct: 329 Q--------DLIPDALENLAKSSTYHNHKAEQ--TSLPLKQSTIYYDKDKNDFFLKEA 376
>gi|365961481|ref|YP_004943048.1| DNA mismatch repair protein MutL [Flavobacterium columnare ATCC
49512]
gi|365738162|gb|AEW87255.1| DNA mismatch repair protein MutL [Flavobacterium columnare ATCC
49512]
Length = 625
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 165/345 (47%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+ELV N++DAG+T + + ++V+D+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELVENAIDAGSTDIKLICKDAGKTLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ D+ D + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSVTDARLCFERHATSKIRKAEDLFD---LHTKGFRGEALASIAAIAHVELKTKQDQEEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G +++GSK ++ + GT+ ++LF+N P RR +++S ++ H + R
Sbjct: 122 GTHLIIEGSK--FVSQEPSVLPKGTSFAIKNLFFNIPARRNFLKSDTVELRHIIDDF-QR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL H + F F SE + S+ +++ F + L V + + + G
Sbjct: 179 VALAHENIHFTFYHNGSE---VFNLPQSNLRQRIVNIFAGKTNEKLVPVTEDTEIVRLKG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+I P + + Q+ ++N R++ G +H + A G LK
Sbjct: 236 FIGKPEFAKKNRGEQFFFVNDRFIKSGYLHHAI------------MAAYEGLLKEGMQ-- 281
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P+Y L L P D+ P KT + F D + + A I A++
Sbjct: 282 ---PSYFLYLDVPPHTIDINIHPTKTEIKFDDEQALYAIIRSAVK 323
>gi|449911079|ref|ZP_21794998.1| DNA mismatch repair protein [Streptococcus mutans OMZ175]
gi|450132411|ref|ZP_21870041.1| DNA mismatch repair protein [Streptococcus mutans NLML8]
gi|449153188|gb|EMB56876.1| DNA mismatch repair protein [Streptococcus mutans NLML8]
gi|449258710|gb|EMC56274.1| DNA mismatch repair protein [Streptococcus mutans OMZ175]
Length = 651
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V+D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIYGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|450064168|ref|ZP_21845289.1| DNA mismatch repair protein [Streptococcus mutans NLML5]
gi|450127818|ref|ZP_21868763.1| DNA mismatch repair protein [Streptococcus mutans U2A]
gi|449203953|gb|EMC04784.1| DNA mismatch repair protein [Streptococcus mutans NLML5]
gi|449230233|gb|EMC29500.1| DNA mismatch repair protein [Streptococcus mutans U2A]
Length = 651
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V+D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIYGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|417753307|ref|ZP_12401438.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|333770358|gb|EGL47397.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 673
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 192/416 (46%), Gaps = 49/416 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA +++V + + +++ D+
Sbjct: 14 MTKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQVTIDIEESGLKKIQITDN 73
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + L L RHATSK+ +D+ I T GFRGEAL S++ +S + I T
Sbjct: 74 GEGMSPEDLPLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSVASISKITIKTATKE 130
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G V G + L ++ VGT + +LFYN P R KYM+S ++ H V
Sbjct: 131 DNHGSLLVAIGGEIETL--EETSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIV-DV 187
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGAL 238
V R++L HP+VSF I S+ L S + L I+ +G+ + ++ D
Sbjct: 188 VNRLSLAHPEVSFILI---SDGRQLTQTSGTGDLRQAIAGIYGLNTAKKMIAISNADLDF 244
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
E+SGY+S P + + + + + IN RY+ ++ N L G
Sbjct: 245 EVSGYVSLPELTRANRNYMTILINGRYI-------------------KNFLLNRAILDGY 285
Query: 299 RSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
SK P +++++ L D+ P K V ++A I AI + ++
Sbjct: 286 GSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKERELMALISTAISESLKEQ--- 342
Query: 357 DSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLKNLA----KQRDHMFHKECE 406
D++ DA L S+R S T L PL++ QR+ F KE +
Sbjct: 343 -----DLIPDALENLAKSSTRHFSKPEQTQL---PLQSKGLYYDPQRNDFFVKESD 390
>gi|325955049|ref|YP_004238709.1| DNA mismatch repair protein mutL [Weeksella virosa DSM 16922]
gi|323437667|gb|ADX68131.1| DNA mismatch repair protein mutL [Weeksella virosa DSM 16922]
Length = 593
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 179/366 (48%), Gaps = 32/366 (8%)
Query: 1 MG-TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVD 58
MG I LP+ V N + +G V+ + VV+EL+ N+VDAGA+++ V + ++++D
Sbjct: 1 MGDIIQLLPDHVANQIAAGEVVQRPSSVVKELMENAVDAGASEIKVLIKDAGRSLIQIID 60
Query: 59 DGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAH 118
DG G+S + + ERHATSK + +D I T GFRGEALASI+ V+ +E TK
Sbjct: 61 DGKGMSMTDVRMAFERHATSK---IRTTEDIFHITTKGFRGEALASIAAVAQVEAKTKLT 117
Query: 119 GRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G V++G + GT+V ++LFYN P RR +++S+ + H ++
Sbjct: 118 DETLGSLLVIEGGDVRVQ--EPVVTPSGTSVSVKNLFYNVPARRNFLKSNQVEFRH-IQD 174
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
RIAL H +SF+ I S+ + + + ++ FG + + L E+ +
Sbjct: 175 EFQRIALAHEGISFQLIHNNSD---VYYLKAGNLKQRIVQIFGKKIETQLLEILEETEIV 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA--NNGFLK 296
I GY+ P + + Q+ ++N+R++ +HK + +D+++ NG+
Sbjct: 232 NIKGYVGKPDSAKKSRGEQFFFVNNRFIKNAYLHKAI---------TDAFEGLLPNGY-- 280
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
P+Y L L S D+ P KT + F++ + + AI+ + +
Sbjct: 281 --------TPSYFLYLELDPSKIDINIHPTKTEIKFEEDTKIFQLLRSAIKHSLGQFNVV 332
Query: 357 DSFDVD 362
S D D
Sbjct: 333 PSLDFD 338
>gi|449936541|ref|ZP_21804029.1| DNA mismatch repair protein [Streptococcus mutans 2ST1]
gi|450153981|ref|ZP_21877479.1| DNA mismatch repair protein [Streptococcus mutans 21]
gi|449165511|gb|EMB68515.1| DNA mismatch repair protein [Streptococcus mutans 2ST1]
gi|449238252|gb|EMC37026.1| DNA mismatch repair protein [Streptococcus mutans 21]
Length = 651
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 164/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQTDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|197301743|ref|ZP_03166813.1| hypothetical protein RUMLAC_00469 [Ruminococcus lactaris ATCC
29176]
gi|197299183|gb|EDY33713.1| DNA mismatch repair domain protein [Ruminococcus lactaris ATCC
29176]
Length = 713
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 183/376 (48%), Gaps = 44/376 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I+ L + + + +G V+ +V+ELV N++DAG+T V V + G+ ++++
Sbjct: 1 MPHIHVLDQITIDKIAAGEVIERPASIVKELVENAIDAGSTSVTVEIKDGGIS--FIRIR 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI ++ + RH+TSK+ ++D + I + GFRGEAL+SI+ V+ E+ITK
Sbjct: 59 DNGCGIPKEEVKSAFLRHSTSKI---ETVEDLSHIASLGFRGEALSSIAAVTRTEVITKT 115
Query: 118 HGRPNGYRKVMKGSKCLYL---GIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + V++G K + L G D GTT + LFYN P RRK++++ + H
Sbjct: 116 KDSDLGTKYVIEGGKEVSLEETGAPD-----GTTFLVHQLFYNVPARRKFLKTPMTEAGH 170
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
V+ ++ +AL HP+V+ +F++ + E L T + ++ +G + + L E++
Sbjct: 171 -VQDLLMHLALSHPEVALQFLN--NGQEKLRTSGNGKLKDVIYQIYGRDVAANLIELDYE 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
G L I+G++ P + + F+ ++N RYV G I K L F +
Sbjct: 228 KGGLRITGFLGKPVITRGNRNFENFFVNGRYVKSGMISKALEDAYRDFVMQHKF------ 281
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
P +L+ D+ P K + F+ + V + A+ ++
Sbjct: 282 -----------PFAVLHFHLNGEEVDINVHPTKMELRFQKQQEVYGTVFEAVHRTLLEP- 329
Query: 355 AHDSFDVDMLEDAELP 370
++++ AE+P
Sbjct: 330 -------ELIQRAEVP 338
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 37/231 (16%)
Query: 1151 EFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGE 1210
+ F + + + + K++ QV + V L +IDQHAA ER+ L + L G
Sbjct: 509 DLFEENFLKREVRAEYKLIGQVFDTYWLVEFQDKLYIIDQHAAHERV----LYERTLQG- 563
Query: 1211 GKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV 1270
+ F Q I ++ Q ++ N+NL+ R
Sbjct: 564 --------------------MKTREFTSQYLSPPIILSLSMQEAQLLNENLDRFTRIGFE 603
Query: 1271 I--------TLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGA 1321
I + AVP +F + ++ L+E L LAD + TP + + S +C+ A
Sbjct: 604 IEPFGGEEYAVRAVPDNLFSIAKKEL-LMEMLDDLADGLSTGMTPELIDEKVASMSCKAA 662
Query: 1322 IMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV--NLEALHKQIA 1370
+ + L E ++ EL + C HGRPT + + +LE K+I
Sbjct: 663 VKGNNRLSAQEVDELIAELLTLDNPYHCPHGRPTIIAMTKHDLEKKFKRIV 713
>gi|238795251|ref|ZP_04638834.1| DNA mismatch repair protein mutL [Yersinia intermedia ATCC 29909]
gi|238725419|gb|EEQ16990.1| DNA mismatch repair protein mutL [Yersinia intermedia ATCC 29909]
Length = 638
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 188/380 (49%), Gaps = 36/380 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I+ LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I ++ L L RHATSK+ L D++ I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKEDLSLALARHATSKISSLEDLE---AILSMGFRGEALASISSVSRLILTSRTAEQNE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VG+T+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELL----CTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
IAL V+ I++ +L+ S L S G ++ G L
Sbjct: 178 IALARFDVA---INLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P S ++ QY Y+N+R + +L+NH +A LK
Sbjct: 235 TIRGWVADPAASRTLSEMQYCYVNNRMMRD----RLINHAIR--------QAYQDLLKDD 282
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
+ PAY+L L PH + D+ P K V F V FI +A+ + +++ A
Sbjct: 283 QQ-----PAYVLYLDIDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAVTTV-LQQAASP 335
Query: 358 SFDVDMLEDAELPLESSRFQ 377
+++ ED E +E+ R+Q
Sbjct: 336 VLNIN--EDGE-EIEAPRWQ 352
>gi|450110640|ref|ZP_21862214.1| DNA mismatch repair protein [Streptococcus mutans SM6]
gi|449224640|gb|EMC24266.1| DNA mismatch repair protein [Streptococcus mutans SM6]
Length = 651
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I + EL T L +GI + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLI--KDGRELTKTAGKGDLHQALAGIYGITTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|90414477|ref|ZP_01222453.1| DNA mismatch repair protein [Photobacterium profundum 3TCK]
gi|90324482|gb|EAS41041.1| DNA mismatch repair protein [Photobacterium profundum 3TCK]
Length = 717
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 171/349 (48%), Gaps = 26/349 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDKGGSRTIRIRDNGKG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I++D L L RHATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IAKDELGLALSRHATSKISSL---DDLEAIVSLGFRGEALASISSVSRLTLTSRTATQEE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
+ +G + + + + +GTT+ DLF+N P RRK++++ + H + + + R
Sbjct: 120 AWSAYAEG-RDMDVQLKPAAHPIGTTIEVLDLFFNTPARRKFLRTEKTEFNH-IDELLKR 177
Query: 183 IALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
IAL VS + ++ + + + L+S+ G V G L++S
Sbjct: 178 IALSRFDVSITLRHNGKTIRQYRASQTQIQKERRLVSACGQSFLQHALAVELEHGDLKLS 237
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G+I +P S S QY Y+N R + KL+NH +++AN
Sbjct: 238 GWICTPQGSRSQNDVQYCYVNGRMMKD----KLINHA-----IRQAYEANLA-------- 280
Query: 302 SQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
S AY+L + PH + D+ P K V F V FI + I+SA
Sbjct: 281 SDQYSAYVLFIEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQGIQSA 328
>gi|206577274|ref|YP_002240875.1| DNA mismatch repair protein [Klebsiella pneumoniae 342]
gi|290512270|ref|ZP_06551637.1| DNA mismatch repair protein mutL [Klebsiella sp. 1_1_55]
gi|238058935|sp|B5Y334.1|MUTL_KLEP3 RecName: Full=DNA mismatch repair protein MutL
gi|206566332|gb|ACI08108.1| DNA mismatch repair protein MutL [Klebsiella pneumoniae 342]
gi|289775265|gb|EFD83266.1| DNA mismatch repair protein mutL [Klebsiella sp. 1_1_55]
Length = 619
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 174/368 (47%), Gaps = 53/368 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ K I D + E L C + A L + IE
Sbjct: 178 IALARFDVTINLNHNGKVIRQYRAVAQDGQRERRLGTICGA----AFLEHALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLRGWVADPLHTTPALAEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKI 354
S +++
Sbjct: 327 LSVLQQQL 334
>gi|406694730|gb|EKC98052.1| hypothetical protein A1Q2_07598 [Trichosporon asahii var. asahii
CBS 8904]
Length = 799
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 177/361 (49%), Gaps = 22/361 (6%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC--NCYVKVVD 58
M I RLP +RS V+ + +V+ ELV N++DAGA ++ ++ + N ++V D
Sbjct: 43 MDCIERLPRPTALRLRSSVVVASIPQVLNELVQNALDAGAVRIECWLDLSRGNESIRVED 102
Query: 59 DGSGISRDGLVLLGERH------ATSKLGHLADMDDATG-IGTFGFRGEALASISDVSLL 111
DG G+ + L +GER+ AT+ L + + G + T+GFRGEALASIS + L+
Sbjct: 103 DGHGLDLEDLRSIGERNSRYCNSATANLPVTSKENHGFGALSTYGFRGEALASISTMGLI 162
Query: 112 EIITKAHGRPNGYRKVMKGSKCLYLGIDDER--KDVGTTVVSRDLFYNQPVRRKYMQSSP 169
+I ++ K++K + LYLG + GT V RDLF+ PVR+ + ++
Sbjct: 163 DITSQV-AEEYTVTKILKSGEALYLGPAKRELGRARGTNVTVRDLFHGVPVRQAELAAAS 221
Query: 170 KKVLHSV-KKCVLRIALVHPKVSFKFIDMESED--ELLCTCSSSSPLALLISSFGIEDFS 226
+ + KK + +ALVHP V + S ++L SS L +G
Sbjct: 222 SSSVLASCKKVIESLALVHPHVRWILWASGSRGMRKVLSLQGCSSTLEAFKELYGAAGVE 281
Query: 227 FLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAAS--FDC 284
+ V+ + G I G+IS + +A Q+++IN + +H+L++ A F
Sbjct: 282 KVQHVSTSAGPRRIDGFIS--LEGAVTRAHQHLFINGYPIENSALHQLISKRFAKSPFGS 339
Query: 285 SDSWKANNGFLKGKR---SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF 341
S ++ + GKR + + P Y+LNL P D +++P K + D++ V F
Sbjct: 340 MASDLMDDALMGGKRPSPRRLERYPVYVLNLTLPADEVDASYEPRKVTFGYHDFDSVQTF 399
Query: 342 I 342
+
Sbjct: 400 L 400
Score = 90.5 bits (223), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 114/257 (44%), Gaps = 36/257 (14%)
Query: 1148 LTGEFFIPD---SINKSCLEDAKVLQQVDKKFIPVV--AGG--TLAVIDQHAADERIRLE 1200
LT PD S + + L++A VL+QVDKKFIP V A G TLA+ DQHAADER LE
Sbjct: 535 LTKTLPGPDVDISFSNASLQNASVLRQVDKKFIPCVLEAEGRKTLAIFDQHAADERASLE 594
Query: 1201 ELRHKVLSGEGKSVAYLDAEQE------LVLPEIGYQLLQNFAEQIKDWGWICNIHTQGS 1254
+ + + A +E L E+ Y ++ WG +
Sbjct: 595 MILESLCKSFAEDTMPTTALEEGTVRVVLSRQEVEYLETPGVRPLLQRWGMRLGLAQPEG 654
Query: 1255 RSFNKNL--------NLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST-- 1304
N+ L ++Q T +T L + + ++ L + DTD S
Sbjct: 655 DYAQVNVYAVPEMLDRLARKQATELTRL-LRLYLPEAADGIGEIQALTEALDTDSESAKS 713
Query: 1305 ---------TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1355
P +L + SKACRGA+MF D+L +C +V L T + CAHGRPT
Sbjct: 714 NGWKGVVRWMPREMLELAKSKACRGAVMFEDALNQDQCERLVSRLASTRNPWACAHGRPT 773
Query: 1356 TVPLVNL---EALHKQI 1369
VPL + E+ H+ I
Sbjct: 774 VVPLCVIDGAESSHRPI 790
>gi|347539107|ref|YP_004846532.1| DNA mismatch repair protein MutL [Pseudogulbenkiania sp. NH8B]
gi|345642285|dbj|BAK76118.1| DNA mismatch repair protein MutL [Pseudogulbenkiania sp. NH8B]
Length = 629
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 166/343 (48%), Gaps = 27/343 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ LP+ + N + +G V+ ++E++ NS+DAGA ++ V + ++V D+
Sbjct: 1 MKRIHALPDHLVNQIAAGEVVERPASALKEMLENSLDAGADRITVDLAQGGIKLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI D L L +RHATSK+ LAD++ + T GFRGE LASI+ VS L +I++ H
Sbjct: 61 GSGIVPDDLPLALDRHATSKIASLADLES---VATLGFRGEGLASIASVSRLTLISRPHD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ + +++ L+ ++ GT+V DL++N P RRK+++ + H
Sbjct: 118 EAHAH-QIIAIDGALH-PVEPAAHAPGTSVEVVDLYFNTPARRKFLKGENTEYAHCA-AT 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
RIAL HP+V F L S + + L+ +E L+ N G L+
Sbjct: 175 FERIALAHPQVEFLLRHNGKAVWRLPAQSLAERVGALLGKDFVEAALPLE---TNAGGLQ 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G+++SP S + + QY Y+N R+V L +A L R
Sbjct: 232 LAGFVASPTYSKASRDAQYFYVNGRFVRDKTAQHALR------------QAYRDVLHHDR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 342
PAY L L + D+ P K V F++ + + F+
Sbjct: 280 H-----PAYALFLTIDPAGVDVNVHPTKIEVRFRESQAIHQFL 317
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 25/175 (14%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L V+D HAA ERI E L++ + E S+ Q L+LP +FA D
Sbjct: 459 LIVVDMHAAHERIVYERLKNAL---EADSIPM----QPLLLP-------VSFA---ADRM 501
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQ-LADTDGSS 1303
+H G + L T I + VP V L D + +E + L D
Sbjct: 502 EAATVHEHGEEMKRLGVELAPLSPTQIAVRGVP----VWLKDGNPVELARAVLKDVREFG 557
Query: 1304 TTPPSVLR---VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1355
T R +L + AC GA+ L +E ++ +++ T QC HGRPT
Sbjct: 558 LTRVLTERRNELLATMACHGAVRANRQLTLAEMNALLRDMEATERSGQCNHGRPT 612
>gi|163756800|ref|ZP_02163909.1| DNA mismatch repair protein [Kordia algicida OT-1]
gi|161323189|gb|EDP94529.1| DNA mismatch repair protein [Kordia algicida OT-1]
Length = 620
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 169/345 (48%), Gaps = 27/345 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ VV+EL+ N++DA AT++ + V + V+D+G G
Sbjct: 5 IRLLPDHVANQIAAGEVVQRPASVVKELLENAIDAKATEIKLIVKEAGKTLIHVIDNGFG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ D+ + T GFRGEALASI+ ++ +E+ TK
Sbjct: 65 MSETDARLSFERHATSKIQAAEDL---FNLNTKGFRGEALASIAAIAHVELQTKKEADEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G R ++GSK + + GT++ ++LFYN P RR +++S ++ H + + R
Sbjct: 122 GTRIKIEGSKLITQEVI--TTPTGTSIAVKNLFYNIPARRNFLKSDAVELRHIIDEF-QR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP + F +E L S+ +++ G + L + + ++ISG
Sbjct: 179 VALAHPDIGFVLYHNGNE---LFNLPKSNYRQRIVNILGGKTNEKLVPIQEDTDIVKISG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + + Q+ ++N+R++ +H +N A+F+ G LK K
Sbjct: 236 FVGKPEFAKKSRNEQFFFVNNRFIKSPYLHHAIN---AAFE---------GLLKEKMQ-- 281
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
P+Y + L D+ P KT + F D + A + ++
Sbjct: 282 ---PSYFIYLEVHPETIDINIHPTKTEIKFDDEHSLYAMLRATVK 323
>gi|54310432|ref|YP_131452.1| DNA mismatch repair protein [Photobacterium profundum SS9]
gi|46914873|emb|CAG21650.1| putative DNA mismatch repair protein MutL [Photobacterium profundum
SS9]
Length = 717
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 172/357 (48%), Gaps = 26/357 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGSRTIRIRDNGKG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I++D L L RHATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IAKDELGLALSRHATSKISSL---DDLEAIVSLGFRGEALASISSVSRLTLTSRTATQEE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
+ +G + + + + +GTT+ DLF+N P RRK++++ + H + + + R
Sbjct: 120 AWSAYAEG-RDMDVQLKPAAHPIGTTIEVLDLFFNTPARRKFLRTEKTEFNH-IDELLKR 177
Query: 183 IALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
IAL VS + ++ + + + L+S+ G V G L +S
Sbjct: 178 IALSRFDVSITLRHNGKTIRQYRASQTQIQKERRLVSACGQSFLQHALAVELEHGDLNLS 237
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G+I +P S S QY Y+N R + KL+NH +++AN
Sbjct: 238 GWICTPQGSRSQNDVQYCYVNGRMMKD----KLINHA-----IRQAYEANLA-------- 280
Query: 302 SQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
S AY+L + PH + D+ P K V F V FI + I+SA + D
Sbjct: 281 SDQYSAYVLFIEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQGIQSALQQGAMDD 336
>gi|449932947|ref|ZP_21803052.1| DNA mismatch repair protein [Streptococcus mutans 3SN1]
gi|449160794|gb|EMB64035.1| DNA mismatch repair protein [Streptococcus mutans 3SN1]
Length = 651
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|440289406|ref|YP_007342171.1| DNA mismatch repair protein MutL [Enterobacteriaceae bacterium
strain FGI 57]
gi|440048928|gb|AGB79986.1| DNA mismatch repair protein MutL [Enterobacteriaceae bacterium
strain FGI 57]
Length = 616
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 183/379 (48%), Gaps = 32/379 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK+ A +DD I + GFRGEALASIS V+ L + ++ +P
Sbjct: 63 IKKDELALALARHATSKI---ASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQPE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + VGTT+ DLFYN P RRK+M++ K + + + + R
Sbjct: 120 AWQAYAEG-RDQDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAND---GALE 239
IAL V+ + +P + + I +FL+ A + G L
Sbjct: 178 IALARFDVAITLNHNGKMIRQYRAVTQGAPRERRLGA--ICGTAFLEHALAIEWQHGDLT 235
Query: 240 ISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+ G+++ P + + ++ QY Y+N R + +L+NH A C D A+
Sbjct: 236 LHGWVADPNHTTPALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLGADQQ----- 285
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI-AH 356
PA++L L PH + D+ P K V F V FI + + S +++ A
Sbjct: 286 -------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLEAP 337
Query: 357 DSFDVDMLEDAELPLESSR 375
+ D D E A P+ +R
Sbjct: 338 LARDEDDDELAPRPIAENR 356
>gi|320155085|ref|YP_004187464.1| DNA mismatch repair protein MutL [Vibrio vulnificus MO6-24/O]
gi|319930397|gb|ADV85261.1| DNA mismatch repair protein MutL [Vibrio vulnificus MO6-24/O]
Length = 664
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 173/364 (47%), Gaps = 54/364 (14%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ VV+ELV NS+D+GATK+ + + +++ D+GS
Sbjct: 2 TIRILPARLANQIAAGEVVERPASVVKELVENSLDSGATKIDIDIEKGGAKLIRIRDNGS 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI +D L L RHATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 62 GIVKDELGLALSRHATSKIHTL---DDLEAIMSLGFRGEALASISSVSRLTLTSRPATQE 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ +G + + + + +GTTV DLF+N P RRK++++ + H + + +
Sbjct: 119 QAWSAYTEG-RDMQVKLQPTAHPIGTTVEVVDLFFNTPARRKFLRTEKTEFAH-IDELLK 176
Query: 182 RIALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFSF 227
RIAL VS K I D+++E L C + +L
Sbjct: 177 RIALSRFDVSITLRHNGKVIRQYRAAHNDLQAEKRLATVCGQAFVRCML----------- 225
Query: 228 LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNH-LAASFDCSD 286
++ L++ G+I++P + QY Y+N R + KL+NH + S++ S
Sbjct: 226 --KIELEHQGLKLHGWITTPEGARQQSDLQYCYVNGRMMRD----KLINHAIRQSYETS- 278
Query: 287 SWKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERA 345
K + AY+L + PH + D+ P K V F V FI +A
Sbjct: 279 -------------LKPEQFAAYVLFIELDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQA 324
Query: 346 IRSA 349
+ SA
Sbjct: 325 LASA 328
>gi|239826704|ref|YP_002949328.1| DNA mismatch repair protein [Geobacillus sp. WCH70]
gi|259509936|sp|C5D9H6.1|MUTL_GEOSW RecName: Full=DNA mismatch repair protein MutL
gi|239806997|gb|ACS24062.1| DNA mismatch repair protein MutL [Geobacillus sp. WCH70]
Length = 619
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 166/354 (46%), Gaps = 27/354 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
MG I +L + + N + +G V+ VV+ELV N+VDA +T + + + ++V+D+
Sbjct: 1 MGKIRKLDDQLSNKIAAGEVVERPASVVKELVENAVDANSTIIEIELEEAGLTKIRVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ D ++ ERHATSK + D D I T GFRGEAL SI+ VS +E+ T
Sbjct: 61 GDGMEEDDCLVAFERHATSK---IKDEHDLFRIRTLGFRGEALPSIASVSEVEMKTSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G + V+KG K + RK GT + +LF+N P R KYM++ ++ H V
Sbjct: 118 GP-GTKVVLKGGKLVVHERTTSRK--GTDITVSNLFFNTPARLKYMKTIHTELGH-VTDV 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+A+ HP +SF+ +LL T + +L + +G++ + + A
Sbjct: 174 VNRLAMAHPDISFRL--RHHGKQLLYTSGNGDVRHVLAAIYGMDVAKKMIPIQAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+ GYIS P + + + + +N RYV P+ K + + L R
Sbjct: 232 VQGYISLPEVTRASRNYISTIVNGRYVRNIPLAKAIE------------AGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P L++ L D+ P K V F + + +AIR A +
Sbjct: 280 -----YPIVFLSIAMDPILVDVNVHPAKLEVRFSKEAELNELVTQAIRQALQAR 328
>gi|450092545|ref|ZP_21856050.1| DNA mismatch repair protein [Streptococcus mutans W6]
gi|450149197|ref|ZP_21876035.1| DNA mismatch repair protein [Streptococcus mutans 14D]
gi|449218098|gb|EMC18120.1| DNA mismatch repair protein [Streptococcus mutans W6]
gi|449234920|gb|EMC33906.1| DNA mismatch repair protein [Streptococcus mutans 14D]
Length = 651
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 164/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R +L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRFSLAHPEIAFTLIN--DSRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|386317937|ref|YP_006014101.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|323128224|gb|ADX25521.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 660
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 192/416 (46%), Gaps = 49/416 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA +++V + + +++ D+
Sbjct: 1 MTKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQVTIDIEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + L L RHATSK+ +D+ I T GFRGEAL S++ +S + I T
Sbjct: 61 GEGMSPEDLPLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSVASISKITIKTATKE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G V G + L ++ VGT + +LFYN P R KYM+S ++ H V
Sbjct: 118 DNHGSLLVAIGGEIETL--EETSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGAL 238
V R++L HP+VSF I S+ L S + L I+ +G+ + ++ D
Sbjct: 175 VNRLSLAHPEVSFILI---SDGRQLTQTSGTGDLRQAIAGIYGLNTAKKMIAISNADLDF 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
E+SGY+S P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVSGYVSLPELTRANRNYMTILINGRYI-------------------KNFLLNRAILDGY 272
Query: 299 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
SK P +++++ L D+ P K V ++A I AI + ++
Sbjct: 273 GSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKERELMALISTAISESLKEQ--- 329
Query: 357 DSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLKNLA----KQRDHMFHKECE 406
D++ DA L S+R S T L PL++ QR+ F KE +
Sbjct: 330 -----DLIPDALENLAKSSTRHFSKPEQTQL---PLQSKGLYYDPQRNDFFVKESD 377
>gi|423315754|ref|ZP_17293659.1| DNA mismatch repair protein MutL [Bergeyella zoohelcum ATCC 43767]
gi|405585470|gb|EKB59294.1| DNA mismatch repair protein MutL [Bergeyella zoohelcum ATCC 43767]
Length = 593
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 182/375 (48%), Gaps = 30/375 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVG-VCNCYVKVVDDGSG 62
I LP+ V N + +G V+ +V+EL+ N++DAGATKV + V V+VVD+G G
Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASIVKELMENAIDAGATKVELIVREAGRNLVQVVDNGIG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK + +D I + GFRGEALASI+ VS +E+ TK
Sbjct: 65 MSETDARMAFERHATSK---IRTTEDIFKIMSKGFRGEALASIAAVSQVELKTKKQDADI 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++G + + + GT++ ++LFYN P RRK+++++ + H + + R
Sbjct: 122 GTNIYIEGGMLQFQ--EPIQTTTGTSIAVKNLFYNVPARRKFLKNNNVEFRHILDEFQ-R 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL H ++ F D+ D + S L ++ FG + L + + G +++ G
Sbjct: 179 VALAHEQIEF---DLFHNDAPIFRLRKGSSLQRIVDIFGRKLQPLLIPLKEDLGWIKLQG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
+++ P + + Q+ ++N R+ ++K + +A G L
Sbjct: 236 FVAKPEGAKKTRGEQFFFVNGRFFKSPYLNKAVQ------------EAFEGLL-----MP 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-RSAWMKKIAHDSFDV 361
P++ L L D+ P KT + F+D + A I I RS + IA S D
Sbjct: 279 GYTPSFFLFLETEPEKIDVNVHPQKTEIKFEDEHLIFALIRSTIKRSLGIYNIA-PSLDF 337
Query: 362 DMLED-AELPLESSR 375
D D E+ ++SS+
Sbjct: 338 DRNPDFEEMIIQSSK 352
>gi|422700397|ref|ZP_16758244.1| DNA mismatch repair protein [Enterococcus faecalis TX1342]
gi|315171155|gb|EFU15172.1| DNA mismatch repair protein [Enterococcus faecalis TX1342]
Length = 710
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 169/353 (47%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++ IE+AI+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMTLIEQAIQ 323
>gi|449969187|ref|ZP_21813062.1| DNA mismatch repair protein [Streptococcus mutans 2VS1]
gi|450030661|ref|ZP_21833352.1| DNA mismatch repair protein [Streptococcus mutans G123]
gi|450058932|ref|ZP_21843295.1| DNA mismatch repair protein [Streptococcus mutans NLML4]
gi|450164010|ref|ZP_21881081.1| DNA mismatch repair protein [Streptococcus mutans B]
gi|449174307|gb|EMB76801.1| DNA mismatch repair protein [Streptococcus mutans 2VS1]
gi|449192613|gb|EMB94028.1| DNA mismatch repair protein [Streptococcus mutans G123]
gi|449203587|gb|EMC04444.1| DNA mismatch repair protein [Streptococcus mutans NLML4]
gi|449242467|gb|EMC41053.1| DNA mismatch repair protein [Streptococcus mutans B]
Length = 651
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 164/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R +L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRFSLAHPEIAFTLIN--DSRELTKTAGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|408402567|ref|YP_006860531.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|417927537|ref|ZP_12570925.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765411|gb|EGR87937.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|407968796|dbj|BAM62034.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 660
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 192/416 (46%), Gaps = 49/416 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA +++V + + +++ D+
Sbjct: 1 MTKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQVTIDIEESGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + L L RHATSK+ +D+ I T GFRGEAL S++ +S + I T
Sbjct: 61 GEGMSPEDLPLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSVASISKITIKTATKE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G V G + L ++ VGT + +LFYN P R KYM+S ++ H V
Sbjct: 118 DNHGSLLVAIGGEIETL--EETSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGAL 238
V R++L HP+VSF I S+ L S + L I+ +G+ + ++ D
Sbjct: 175 VNRLSLAHPEVSFILI---SDGRQLTQTSGTGDLRQAIAGIYGLNTAKKMIAISNADLDF 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
E+SGY+S P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVSGYVSLPELTRANRNYMTILINGRYI-------------------KNFLLNRAILDGY 272
Query: 299 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
SK P +++++ L D+ P K V ++A I AI + ++
Sbjct: 273 GSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKERELMALISTAISESLKEQ--- 329
Query: 357 DSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLKNLA----KQRDHMFHKECE 406
D++ DA L S+R S T L PL++ QR+ F KE +
Sbjct: 330 -----DLIPDALENLAKSSTRHFSKPEQTQL---PLQSKGLYYDPQRNDFFVKESD 377
>gi|345885022|ref|ZP_08836415.1| DNA mismatch repair protein mutL [Prevotella sp. C561]
gi|345042077|gb|EGW46185.1| DNA mismatch repair protein mutL [Prevotella sp. C561]
Length = 629
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 31/348 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGSG 62
I LP++V N + +G V+ V++ELV N++DAGAT + + V ++V+DDG G
Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGATHIDVLVVDAGRTSIQVIDDGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK + DD + T GFRGEALASI+ V+ +E+ T+
Sbjct: 65 MSETDARLSFERHATSK---IRKADDLFSLRTMGFRGEALASIAAVAQVELKTRMASEDL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + GS+ + G + VG+ + +LF+N P RRK+++S+ + L+++ R
Sbjct: 122 GTHLSIAGSR--FTGQEPCSCPVGSNFLVENLFFNVPARRKFLKSNTTE-LNNIITAFER 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
I LV+P++SF + S L S S ++ FG L ++ + I G
Sbjct: 179 IVLVYPQISFT---LHSNGTELFNLRSCSYRQRIVEVFGKRLNQDLLPIDVDTTLCHIHG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ P + QY ++N RY+ HK + +FD +
Sbjct: 236 FVGKPEAARKKAPHQYFFVNERYMKHPYFHK---AVLTAFD-------------RLIPQG 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAI 346
+ P Y L P D+ P KT + F++ W+ +LA ++ A+
Sbjct: 280 EQIP-YFLYFDVPAENIDVNIHPTKTEIKFENEQAIWQILLAAVKEAV 326
>gi|429759391|ref|ZP_19291890.1| DNA mismatch repair protein [Veillonella atypica KON]
gi|429179667|gb|EKY20906.1| DNA mismatch repair protein [Veillonella atypica KON]
Length = 652
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 180/355 (50%), Gaps = 34/355 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGV-CNCYVKVVDD 59
M TI+ L E N + +G V+ VV+EL+ NS+DAGAT + V +G + Y+++ D+
Sbjct: 1 MATIHVLDETTINKIAAGEVVERPASVVKELIENSIDAGATSIEVEIGEGGSAYMRITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + L RHATSK+ ++ D+ D I + GFRGEALASI+ VS + T+
Sbjct: 61 GKGMTEEDARLAVLRHATSKIQNVEDLFD---IASLGFRGEALASIASVSHFILTTRTVD 117
Query: 120 RPNGYRKVMKG---SKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+ G R ++ G + C+ G GTT+ ++LF+N P RRK++++ + +
Sbjct: 118 QELGTRILIDGGTFTDCIPYGAAP-----GTTIEVKELFFNTPARRKFLKTE-RTESSKI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDEL-LCTCSSSSPLALLISSFGIEDFSFLDEVNAND 235
+ V ++AL +P ++FK + +D + + T + S + + +G + + + +
Sbjct: 172 QDIVGKLALSNPHIAFK---LTIDDRVAIITPGTGSIQDTVAALYGYKTKNDIFPIAYES 228
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
+ I G +S P S + +Q + +N+R + I K ++ + + +G+
Sbjct: 229 EHIYIEGVVSKPTLLKSTRIWQTIIVNNRVISDKTILKAID------NAYHALLPKSGY- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
P LL++ P S+ D+ P K+ V F+D + + + AI +A
Sbjct: 282 ----------PLVLLHITVPASMVDINVHPRKSEVKFEDDKIIFKAVYHAILNAL 326
>gi|289450496|ref|YP_003475197.1| DNA mismatch repair protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289185043|gb|ADC91468.1| DNA mismatch repair protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 677
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 182/359 (50%), Gaps = 30/359 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I L N++ +G V+ VV+EL N++DAGA + + + N Y++V+DD
Sbjct: 1 MNKIKVLDVQTANSIAAGEVVERPASVVKELCENALDAGAGNIKITIKNGGNSYLQVLDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + L HATSKL ++D+D+ + T GFRGEALASI+ V+ + +IT+
Sbjct: 61 GCGMTGEDAKLAFLPHATSKLSVISDLDN---LDTMGFRGEALASIAAVAKVNLITRTAD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P+ + G K + I +GT + DLF+N P R K+++ + L+ +
Sbjct: 118 APSAVTLQVDGGK--WSEITPVGAPIGTCITVEDLFFNTPARFKFLKKDSTE-LNKIIDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFS---FLDEVN-AND 235
V ++AL P VSF E LL T ++ +++ S FG + S L E++ A++
Sbjct: 175 VQKLALARPDVSFLL--STPERILLHTPGNNDLPSVVFSLFGKQTASELIALPELDMADN 232
Query: 236 GALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
+++SG I P + S +A Q V++N+R P+H +A + ++++ + +
Sbjct: 233 SPVKVSGLIGQPGAARSSRASQLVFVNNR-----PVH----DIAVTKAIDEAYR--DRLM 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
KGK P ++ L P L D+ P K+ V F + V + I+SA + +
Sbjct: 282 KGK------YPVVIIKLNLPPYLVDINVHPQKSEVRFWNSGTVFNSVYHTIKSALAEDV 334
>gi|283786849|ref|YP_003366714.1| DNA mismatch repair protein [Citrobacter rodentium ICC168]
gi|282950303|emb|CBG89950.1| DNA mismatch repair protein [Citrobacter rodentium ICC168]
Length = 621
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 171/368 (46%), Gaps = 53/368 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNH-IDEIVRR 177
Query: 183 IALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ D + E L C + L + IE
Sbjct: 178 IALARFDVTINLSHNGKVVRQYRAVAQDGQKERRLGAICGTP----FLEQALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLRGWVADPNHTTTALAEIQYCYVNGRMMRD----RLINH-AIRQACEDR 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKI 354
S +++
Sbjct: 327 LSVLQQRL 334
>gi|450100397|ref|ZP_21858753.1| DNA mismatch repair protein [Streptococcus mutans SF1]
gi|450171966|ref|ZP_21884322.1| DNA mismatch repair protein [Streptococcus mutans SM4]
gi|449220470|gb|EMC20340.1| DNA mismatch repair protein [Streptococcus mutans SF1]
gi|449243283|gb|EMC41728.1| DNA mismatch repair protein [Streptococcus mutans SM4]
Length = 651
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIVELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|397904384|ref|ZP_10505300.1| DNA mismatch repair protein MutL [Caloramator australicus RC3]
gi|397162604|emb|CCJ32634.1| DNA mismatch repair protein MutL [Caloramator australicus RC3]
Length = 609
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 177/356 (49%), Gaps = 36/356 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I L + + + +G V+ VV+EL+ NS+DAGA+ + V + G+ +K+
Sbjct: 1 MSKIRILDDDLITKIAAGEVVERPASVVKELIENSIDAGASIIEVEIENGGIS--LIKIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI +D + + RH TSK+ + DD I T GFRGEALASI VS +E+ITK
Sbjct: 59 DNGHGIEKDDVEIAFLRHTTSKI---KNEDDLYNIRTLGFRGEALASICAVSKVEMITKT 115
Query: 118 HGRPNGYRKVMKGSKC---LYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G + ++G + + G D GTT++ +DLFYN P R K+++ +P +
Sbjct: 116 KDDLTGTKIYIEGGEIIDKIECGAPD-----GTTIIVKDLFYNTPARLKFLK-TPSREAM 169
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
V + V +AL +SFK+ + + T + L ++S +G + L +++
Sbjct: 170 IVSEIVQSLALSKENISFKY--KNNGKIVFATKGDGNLLNAILSLYGRQVKDNLLKIDYE 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
+ ++I GYI + + + +Q ++IN R + I+ + ++ S+ SD +
Sbjct: 228 ENDIKIEGYIGNNALGKNNRNYQTLFINGRLIKNKTINAAIENVYRSYSTSDKF------ 281
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
P Y++ + L D+ P K V F++ + + + +A+++A+
Sbjct: 282 -----------PFYVVKIIMNPQLIDVNVHPTKAEVKFQNDQEIYRLVYKALQNAF 326
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 37/200 (18%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERI----RLEELRHKVLSGEG----KSVAYLDAE 1220
+ Q+ +I A +IDQHAA ERI L+E + + + K + ++
Sbjct: 425 IGQIHLTYIIAEAENEFYIIDQHAAHERILYEKYLDEYQRTAIHSQTLLTPKIIDLKTSD 484
Query: 1221 QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF 1280
+E +L I +NFA+ G++ I G S I+L +VP I+
Sbjct: 485 KEFLLENI-----ENFAK----IGFV--IEDFGGNS--------------ISLRSVPVIY 519
Query: 1281 GVNLSDVDLL-EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1339
G N + +D+ E L ++ + G S+ +++ + AC+GAI GD L SE ++++
Sbjct: 520 G-NPNYIDVFNEILNEIVQSSGGFLN--SINKIIYTMACKGAIKAGDKLTLSEMNKLIDD 576
Query: 1340 LKQTSLCFQCAHGRPTTVPL 1359
L++ + C HGRPT + +
Sbjct: 577 LRRCKNPYSCPHGRPTLIRM 596
>gi|392573585|gb|EIW66724.1| hypothetical protein TREMEDRAFT_34488 [Tremella mesenterica DSM
1558]
Length = 788
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 205/419 (48%), Gaps = 46/419 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGV--CNCYVKVVDDGS 61
I+ LP + +RS ++ L +++ EL+ NS+DA A + V + + + ++V DDG
Sbjct: 12 ISPLPRSTSTQIRSSLIIPTLPQILSELIQNSLDASAKSLVVRICLEDGDQSLRVEDDGC 71
Query: 62 GISRDGLVLLGERHATSK--LGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GI L +G R TSK GH A G +GFRGEALASI+ + LLE+ T+
Sbjct: 72 GIPLQQLTQVGRRFVTSKSTTGHHA--------GHYGFRGEALASIAALGLLEVYTRPEN 123
Query: 120 RPNGYRKVMKGSKCLYLGIDDE-RKDVGTTVVSRDLFYNQPVRR-KYMQSSPKKVLHSVK 177
Y K++KGSK L+ G+ + GTTV+ +D+F+ PVR+ SS L + +
Sbjct: 124 DSRTYAKIIKGSKILFHGLSNRPLGKAGTTVIVKDIFHGIPVRQAALAASSRSSTLSACR 183
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSF---------- 227
K + +AL H VS+ ED + T SSSS + +SS +F
Sbjct: 184 KVIETLALAHSSVSWTVW----EDRDVETSSSSSKKIMTMSSHDASLATFKELYGGALVE 239
Query: 228 --LDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIH-----KLLNHLAA 280
+ ++ + G + + G+IS + S + Q++Y+N V + +H K + +
Sbjct: 240 QRVQKIRVSSGFMRVDGFIS--LEGASGRVHQHLYVNHYPVQRSELHLAISQKFSHSRFS 297
Query: 281 SFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLA 340
+ + + ++ + + K P Y+L++ P D+ ++P K + +KD E V A
Sbjct: 298 AMNQDEPFELTHSDSRRSPRKLDKHPVYVLDVCIPAEDVDVQYEPKKGLLGYKDLEKVKA 357
Query: 341 FIERAIRSAWMKKIAHDSF----DVDMLED-AELPLESSRFQSHQSSTHLHSSPLKNLA 394
F+ A+ ++K+ HD + L D + PL +S S+T + SP+++L+
Sbjct: 358 FV-LAVVDEFLKR--HDFLVQHTKTNTLHDSSSTPLARLHERSASSATQI-LSPMQSLS 412
Score = 83.2 bits (204), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 112/240 (46%), Gaps = 45/240 (18%)
Query: 1162 CLEDAKVLQQVDKKFI----PV-----VAGGTLAVIDQHAADERIRLEELRHKVLSGEGK 1212
L+ A VL QVD KFI P ++ + ++DQHAADER+ +E L H + G K
Sbjct: 533 VLKSATVLGQVDDKFICCVLPTEEAAPISSRIVVLVDQHAADERVSVEFLLHDLCVGFMK 592
Query: 1213 SVAYLDAEQE----LVLPEIGYQLLQNFAEQI-KDWG----------------WI-CNIH 1250
+ + ++ ++ E QL + A I + WG W+ C+I
Sbjct: 593 NDIPITRPKDDLGFVISREEAQQLSRTVARDIFRRWGIDLCLPDSKLDWTTVDWVQCHI- 651
Query: 1251 TQGSRSFNKNLNLLQR----QITVITLLAVPCIFGVNLSDVD-LLEFLQQLADTDGSST- 1304
R++ L L R ++ + L +P + L ++ +L + D D
Sbjct: 652 ----RAYPSILPRLGRKDGQEMARLVKLYLPVVLD-GLGEISTMLGSINDHRDIDQGRIL 706
Query: 1305 --TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNL 1362
P +L ++NSKACR AIMF D L +C +V +L +T F CAHGRP+ VP+V L
Sbjct: 707 RWMPQEMLELVNSKACRSAIMFQDKLDQEQCVRLVAQLAETRNPFSCAHGRPSLVPIVML 766
>gi|300310168|ref|YP_003774260.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1]
gi|300072953|gb|ADJ62352.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1]
Length = 627
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 172/354 (48%), Gaps = 31/354 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP+ + + + +G V+ + VV+EL+ N++DAG+T++ V + + + D+G G
Sbjct: 7 IQALPDQLISQIAAGEVIERPSAVVKELLENALDAGSTQITVRLEQGGVKRIAITDNGRG 66
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + L L RHATSK+ L D+++ + T GFRGEALASI+ V+ L + ++ P+
Sbjct: 67 IPPEQLPLALARHATSKIASLTDLEN---VSTLGFRGEALASIASVAQLTVTSRTADAPH 123
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
+ + GS+ + + GTT+ +DL++N P RRK+++S + H + V R
Sbjct: 124 AWE--ITGSQ--FGTVAPASGAQGTTIDVQDLYFNTPARRKFLKSEQTEYGHCA-EVVRR 178
Query: 183 IALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
IAL P VSF + ++ D + +L F LDE + G L +
Sbjct: 179 IALARPDVSFSLSHNGKTVDHWNVGEFAKRSAHILGDEFANARLP-LDE---SAGPLRLH 234
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G++ P S + QY Y+N R+V KLL H + A L G R
Sbjct: 235 GFVGLPTASKARADGQYFYVNGRFVRD----KLLTHAVRA--------AYQDVLHGDR-- 280
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
PAY L+L +L D+ P K V F+D V F+ A+ A + A
Sbjct: 281 ---YPAYALSLTLDPALVDVNVHPSKIEVRFRDSRAVHQFVFHAVSRALAQTSA 331
>gi|449955935|ref|ZP_21809351.1| DNA mismatch repair protein [Streptococcus mutans 4VF1]
gi|450139694|ref|ZP_21872621.1| DNA mismatch repair protein [Streptococcus mutans NLML1]
gi|449170868|gb|EMB73558.1| DNA mismatch repair protein [Streptococcus mutans 4VF1]
gi|449232639|gb|EMC31742.1| DNA mismatch repair protein [Streptococcus mutans NLML1]
Length = 651
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|449947079|ref|ZP_21807190.1| DNA mismatch repair protein [Streptococcus mutans 11SSST2]
gi|449169043|gb|EMB71832.1| DNA mismatch repair protein [Streptococcus mutans 11SSST2]
Length = 651
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|338732065|ref|YP_004670538.1| DNA mismatch repair protein mutL [Simkania negevensis Z]
gi|336481448|emb|CCB88047.1| DNA mismatch repair protein mutL [Simkania negevensis Z]
Length = 571
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 181/387 (46%), Gaps = 47/387 (12%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGS 61
TI+ L E N + +G V+ + VV+EL+ N+VDA AT+V V + G + V D+G
Sbjct: 4 TIHVLSEETINLIAAGEVIENPASVVKELLENAVDAEATRVTVEIQGGGFKLLSVSDNGK 63
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+SRD L+L ERHATSK + DD T I + GFRGEALASI+ +S + I +
Sbjct: 64 GMSRDDLLLCIERHATSK---IRIADDLTSIFSMGFRGEALASIAAISKMRITSCRKDDA 120
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
N + +G K L + ++ GTTV LFYN P RRK+ Q S + +S+ K +
Sbjct: 121 N--KLYAEGGKIQSL--EPATRNPGTTVAVHALFYNVPARRKF-QKSAQSCQNSIVKMLT 175
Query: 182 RIALVHPKVSFK-----------FIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE 230
++AL HP + K F+ E E++ ++ G E E
Sbjct: 176 KLALAHPFLEVKCIADGKEVFSSFMKRSKEKEVVTH-------DVIEKVLGAEFLEGTSE 228
Query: 231 VNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKA 290
V+ + + G+I SP+ KA QY+++N R + I + +
Sbjct: 229 VHHQEHGCFLHGFIGSPHGCRKSKAGQYLFVNGRAIQSAEISRAI--------------- 273
Query: 291 NNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
G+ G R P ++L+L P D+ P KT + + + + + + A
Sbjct: 274 YEGY--GTRLPLNEHPTFVLHLTLPSQWIDVNVHPQKTEIRLHESSEIEHVVRKGVFEAL 331
Query: 351 MKKIAHDSFDVDMLEDA---ELPLESS 374
++++ + + E + E PLE++
Sbjct: 332 QRELSSNPTNHPKFETSFAWEGPLETT 358
>gi|449904936|ref|ZP_21792936.1| DNA mismatch repair protein [Streptococcus mutans M230]
gi|450010875|ref|ZP_21828837.1| DNA mismatch repair protein [Streptococcus mutans A19]
gi|450023560|ref|ZP_21830675.1| DNA mismatch repair protein [Streptococcus mutans U138]
gi|450116658|ref|ZP_21864598.1| DNA mismatch repair protein [Streptococcus mutans ST1]
gi|449189862|gb|EMB91482.1| DNA mismatch repair protein [Streptococcus mutans A19]
gi|449193167|gb|EMB94558.1| DNA mismatch repair protein [Streptococcus mutans U138]
gi|449226762|gb|EMC26253.1| DNA mismatch repair protein [Streptococcus mutans ST1]
gi|449258775|gb|EMC56335.1| DNA mismatch repair protein [Streptococcus mutans M230]
Length = 651
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTAGKGDLHQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|81427977|ref|YP_394976.1| DNA mismatch repair protein [Lactobacillus sakei subsp. sakei 23K]
gi|78609618|emb|CAI54664.1| DNA mismatch repair protein MutL [Lactobacillus sakei subsp. sakei
23K]
Length = 653
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 175/355 (49%), Gaps = 41/355 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L E + N + +G V+ VV+ELV N++DA +T+V + V ++V+D+
Sbjct: 2 MGKIHELSEILSNQIAAGEVIERPASVVKELVENAIDANSTQVDIVVEQAGLQMIQVIDN 61
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + + +RHATSK +A D I + GFRGEALASI+ VS L I T A
Sbjct: 62 GDGIEPEDVPVAFKRHATSK---IATRQDLFKIQSLGFRGEALASIASVSDLTIET-ATA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD----VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHS 175
G KG G+ +E+K GT + RDLF+N P R KY+++ + L +
Sbjct: 118 DSLGTFAHFKG------GLLEEQKTNPIRPGTAITVRDLFFNTPARLKYVKTFQTE-LAN 170
Query: 176 VKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNAN 234
+ V R+A+ HP+++F + ++ LL + ++ L I+ +G+ L V+A+
Sbjct: 171 IVDIVNRLAMSHPQIAFT---LTNDGHLLLKTAGNNDLKQTIAGIYGVTMAKKLLAVSAS 227
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
D +++GY+S P + + + + + IN R++ +++ N
Sbjct: 228 DLDFKLTGYVSLPELTRATRNYLSILINGRFI-------------------KNYQLNKAI 268
Query: 295 LKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+KG SK P +L + L D+ P K V ++ IE AI+
Sbjct: 269 IKGYGSKLMVGRYPIAVLAIEMDPLLIDVNVHPTKQEVRLSKETALMTLIEGAIK 323
>gi|262196403|ref|YP_003267612.1| DNA mismatch repair protein MutL [Haliangium ochraceum DSM 14365]
gi|262079750|gb|ACY15719.1| DNA mismatch repair protein MutL [Haliangium ochraceum DSM 14365]
Length = 762
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 167/351 (47%), Gaps = 38/351 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDDGSG 62
I LP+ V + + +G V+ VV+ELV N++DA AT V V V ++V+D+G G
Sbjct: 22 IRVLPDTVVDQIAAGEVVERPASVVKELVENALDAHATHVNVEVEAGGKQLIRVLDNGIG 81
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ + L RHATSKL L DD G+GT GFRGEAL SI+ VS + I T+ G+
Sbjct: 82 MTESDVRLALTRHATSKLRAL---DDLYGLGTMGFRGEALPSIAAVSRMSITTRTRGQVA 138
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + ++G + I + VGT + RDL +N P R K+++ + + H V V +
Sbjct: 139 GTKLDIEGGRITQ--ISEVGAPVGTHIEIRDLLFNVPARLKFLKGNATEASH-VTDSVAK 195
Query: 183 IALVHPKVSFKF-----IDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+A+VHP+V + + +E+ + A+L S G E L EV+ +
Sbjct: 196 LAMVHPQVHVRLRHGGRVALEAPQH---SSGLERARAILGSRLGRE----LHEVSGAENG 248
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVC-KGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ ++ Y+++P + S Y+++ R V +G +H + S K
Sbjct: 249 VRVTAYLAAPDLAQSTSRSTYLFVGKRAVKDRGLLHAV------------SMGYGELVPK 296
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G+ P +L L P D+ P K V F D V A + +R
Sbjct: 297 GR------FPVAVLCLEVPGGEVDVNVHPQKLEVRFSDGPAVFAAVRHVLR 341
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 21/189 (11%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI 1228
+ Q+D+ ++ + G + ++DQHAA ER+ + LR + + Q L+LP+
Sbjct: 578 IGQLDRTYLVCESNGEMVLVDQHAAHERVAFQRLRDRWAQ-------HAVPVQRLLLPKT 630
Query: 1229 GYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVD 1288
+ L A +D +H G L T L A+P G+ SDV+
Sbjct: 631 -FDLSPEQAAVAEDA--RATLHDMG-------FELEHFGGTTYALKALPA--GLRESDVE 678
Query: 1289 --LLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1346
L E L LA+ GS + L + AC + GD+L E + + L +
Sbjct: 679 TVLHELLDDLAERGGSRALEERLDLALATIACHSVVRAGDALSAQEVRALFKSLDEVDFK 738
Query: 1347 FQCAHGRPT 1355
C HGRP
Sbjct: 739 AHCPHGRPV 747
>gi|407694611|ref|YP_006819399.1| DNA mismatch repair protein mutL [Alcanivorax dieselolei B5]
gi|407251949|gb|AFT69056.1| DNA mismatch repair protein mutL [Alcanivorax dieselolei B5]
Length = 615
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 178/368 (48%), Gaps = 28/368 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I L + N + +G V+ V++EL+ N++DAGA ++ V V ++V DD
Sbjct: 1 MSKIQLLDSRLANQIAAGEVVERPASVLKELLENALDAGARQITVDVEQGGTKLIRVRDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI RD L L RHATSK+ H+A +D IGT GFRGEALA+IS VS L + +
Sbjct: 61 GGGIERDELPLALSRHATSKI-HVA--EDLEAIGTLGFRGEALAAISSVSRLSLTSNIGE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ G+ V++G + + + GTTV RDLF+N P RR+++++ + H +++
Sbjct: 118 QAEGWEVVVEG-RDMAPSVTPAGHPRGTTVTMRDLFFNTPARRRFLRTEKTEFNH-LEEV 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDE---VNANDG 236
RIAL + F+ + L + + + A ++ +F+++ V+ +
Sbjct: 176 FRRIALSEFQTGFRLSHNQKVVHQLPSGDNEALRAARVARLC--GSAFMEQSMPVDVSHA 233
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
L + G++ P S S QY Y+N R + K+++H +A + L
Sbjct: 234 GLRLHGWLGLPTFSRSQSDLQYFYVNGRVIRD----KVVSHAVR--------QAYSDVLY 281
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
R PA++L L +L D+ P K V F++ V F+ R + A +
Sbjct: 282 HGRH-----PAFVLFLELDPALVDVNVHPTKHEVRFREQRMVHDFLYRTLHRAIAEVRPA 336
Query: 357 DSFDVDML 364
D DV L
Sbjct: 337 DRLDVPEL 344
>gi|387787013|ref|YP_006252109.1| DNA mismatch repair protein [Streptococcus mutans LJ23]
gi|379133414|dbj|BAL70166.1| DNA mismatch repair protein [Streptococcus mutans LJ23]
Length = 651
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|345019806|ref|ZP_08783419.1| DNA mismatch repair protein [Ornithinibacillus scapharcae TW25]
Length = 616
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 190/394 (48%), Gaps = 37/394 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I ++P+A+ N + +G V+ VV+ELV NS+DAG+T + V V +++ DDG G
Sbjct: 3 IYQMPDALANKIAAGEVVERPASVVKELVENSIDAGSTWIKVDVNEAGLELIRITDDGEG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ D + RHATSK+ + +D+ + T GFRGEALASI+ VS LEI T + G
Sbjct: 63 MAEDDVERAFLRHATSKIRNESDL---FHVQTLGFRGEALASIASVSRLEIKT-SQGDSA 118
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++G + G D RK GT + DLFYN P R KYM++ ++ H + + R
Sbjct: 119 GTFLSLEGGNVVDRGKSDARK--GTEITVSDLFYNTPARLKYMKTIHTELGH-ITDLLNR 175
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL HP+V F+ + L T + L ++ +G+ + V ++SG
Sbjct: 176 LALSHPEVRFE--ATHNGKPLFKTPGTGDLLQVIAQIYGMGVARKMLPVEEETLDFKVSG 233
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
YI+ P + + +++ + +N R++ P+ + + + + L RS
Sbjct: 234 YIAKPEITRASRSYVSIILNGRFIKSIPLTQAI------------IRGYHTLLPIGRS-- 279
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P +L + L D+ P K F + + +E IR + +
Sbjct: 280 ---PIVVLQIEMDPILVDVNVHPTKLEARFSKDKELYLLVEELIRKTFRQTRL------- 329
Query: 363 MLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQ 396
+ E + P+E R QS+Q++ ++ K +AK+
Sbjct: 330 IPEIPQKPIEKPR-QSYQNTIDFDTA--KPIAKE 360
>gi|402843755|ref|ZP_10892144.1| DNA mismatch repair protein, C-terminal domain protein [Klebsiella
sp. OBRC7]
gi|423106051|ref|ZP_17093752.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5242]
gi|376378837|gb|EHS91594.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5242]
gi|402276273|gb|EJU25388.1| DNA mismatch repair protein, C-terminal domain protein [Klebsiella
sp. OBRC7]
Length = 629
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 177/384 (46%), Gaps = 58/384 (15%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVARLTLTSRTEEQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEIVRR 177
Query: 183 IALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ D + E L C L L + IE
Sbjct: 178 IALARFDVTINLSHNGKAVRQYRAVSQDGQRERRLGAICG----LPFLEHALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L +SG+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLSGWVADPLHTNPTLAEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L+ PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLKIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKIAHDSFDVDMLEDAELP 370
S + +V + E+ + P
Sbjct: 327 LS-----VLQQQLEVPLAEEGDEP 345
>gi|418020539|ref|ZP_12659788.1| DNA mismatch repair protein MutL [Candidatus Regiella insecticola
R5.15]
gi|347604098|gb|EGY28815.1| DNA mismatch repair protein MutL [Candidatus Regiella insecticola
R5.15]
Length = 612
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 174/358 (48%), Gaps = 33/358 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP + N + +G V+ VV+EL+ NS+DAGA + + + G + +++ D+G+G
Sbjct: 3 IKMLPPQITNQIAAGEVVERPASVVKELLENSLDAGAKWIDINIKGGGSKLIRIQDNGTG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I++D L L RHATSK+ L DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IAKDDLPLALARHATSKISAL---DDLMTIRSMGFRGEALASISSVSRLLLTSRTVEQTE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G L + I VG+T+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQSYAEGRDML-VKIKPAAHPVGSTLEVFDLFYNTPARRKFMRTEKTEFAH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLA----LLISSFGIEDFSFLDEVNANDGAL 238
IAL H V+ I + ++L+ + S A L S G + ++ L
Sbjct: 178 IALAHFDVT---IHLHHNEKLIRQYRAVSDPARYSQRLASVCGNVFLQHMLAISWQHEDL 234
Query: 239 EISGYISSP---YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFL 295
I G+++ P +++ S+ QY Y+N+R + +L+NH +A G
Sbjct: 235 AIHGWLADPQMLHNARSLNEIQYCYVNNRVIRD----RLINHAIR--------QAYQGL- 281
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
SK AY+L L S D+ P K V F V FI +A+ A K
Sbjct: 282 ----SKDGQQIAYVLYLTIEPSQVDINVHPAKHEVRFHQARLVHDFIYQAVTMALQDK 335
>gi|288937531|ref|YP_003441590.1| DNA mismatch repair protein MutL [Klebsiella variicola At-22]
gi|288892240|gb|ADC60558.1| DNA mismatch repair protein MutL [Klebsiella variicola At-22]
Length = 619
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 174/368 (47%), Gaps = 53/368 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ K I D + E L C + A L + IE
Sbjct: 178 IALARFDVTINLNHNGKVIRQYRAVAQDGQRERRLGTICGA----AFLEHALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLRGWVADPLHTTPALAEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKI 354
S +++
Sbjct: 327 LSVLQQQL 334
>gi|401885204|gb|EJT49327.1| hypothetical protein A1Q1_01529 [Trichosporon asahii var. asahii
CBS 2479]
Length = 799
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 177/361 (49%), Gaps = 22/361 (6%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC--NCYVKVVD 58
M I RLP +RS V+ + +V+ ELV N++DAGA ++ ++ + N ++V D
Sbjct: 43 MDCIERLPRPTALRLRSSVVVASIPQVLNELVQNALDAGAVRIECWLDLSRGNESIRVED 102
Query: 59 DGSGISRDGLVLLGERH------ATSKLGHLADMDDATG-IGTFGFRGEALASISDVSLL 111
DG G+ + L +GER+ AT+ L + + G + T+GFRGEALASIS + L+
Sbjct: 103 DGHGLDLEDLRSIGERNSRYCNSATADLPVTSKENHGFGALSTYGFRGEALASISTMGLI 162
Query: 112 EIITKAHGRPNGYRKVMKGSKCLYLGIDDER--KDVGTTVVSRDLFYNQPVRRKYMQSSP 169
+I ++ K++K + LYLG + GT V RDLF+ PVR+ + ++
Sbjct: 163 DITSQV-AEEYTVTKILKSGEALYLGPAKRELGRARGTNVTVRDLFHGVPVRQAELAAAS 221
Query: 170 KKVLHSV-KKCVLRIALVHPKVSFKFIDMESED--ELLCTCSSSSPLALLISSFGIEDFS 226
+ + KK + +ALVHP V + S ++L SS L +G
Sbjct: 222 SSSVLASCKKVIESLALVHPHVRWILWASGSRGMRKVLSLQGCSSTLEAFKELYGAAGVE 281
Query: 227 FLDEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAAS--FDC 284
+ V+ + G I G+IS + +A Q+++IN + +H+L++ A F
Sbjct: 282 KVQHVSTSAGPRRIDGFIS--LEGAVTRAHQHLFINGYPIENSALHQLISKRFAKSPFGS 339
Query: 285 SDSWKANNGFLKGKR---SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF 341
S ++ + GKR + + P Y+LNL P D +++P K + D++ V F
Sbjct: 340 MASDLMDDALMGGKRPSPRRLERYPVYVLNLTLPADEVDASYEPRKVTFGYHDFDSVQTF 399
Query: 342 I 342
+
Sbjct: 400 L 400
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 115/258 (44%), Gaps = 38/258 (14%)
Query: 1148 LTGEFFIPD---SINKSCLEDAKVLQQVDKKFIPVV--AGG--TLAVIDQHAADERIRLE 1200
LT PD S + + L++A VL+QVDKKFIP V A G TLA+ DQHAADER LE
Sbjct: 535 LTKTLPGPDVDISFSNASLQNASVLRQVDKKFIPCVLEAEGRKTLAIFDQHAADERASLE 594
Query: 1201 ELRHKVLSGEGKSVAYLDAEQE------LVLPEIGYQLLQNFAEQIKDWGWICNIHTQGS 1254
+ + A +E L E+ Y + WG +
Sbjct: 595 MILESFCKSFAEDTMPTTALEEGTVRVVLSRQEVEYLETPGVRPLLHRWGIRLGLAQPEG 654
Query: 1255 RSFNKNL--------NLLQRQITVITLLAVPCIFGVNLSD-VDLLEFLQQLADTDGSST- 1304
N+ L ++Q T +T L ++ + +D + ++ L DT+ S
Sbjct: 655 DYAQVNVYAVPEMLDRLARKQATELTRLLR--LYLPDAADGIGEIQALTAALDTNSESAK 712
Query: 1305 ----------TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1354
P +L + SKACRGA+MF D+L +C +V L T + CAHGRP
Sbjct: 713 SNGWKGVMRWMPREMLELAKSKACRGAVMFEDALNQDQCERLVSRLASTRNPWACAHGRP 772
Query: 1355 TTVPLVNL---EALHKQI 1369
T VPL + E+ H+ I
Sbjct: 773 TVVPLCVIDGAESSHRPI 790
>gi|449876161|ref|ZP_21782635.1| DNA mismatch repair protein [Streptococcus mutans S1B]
gi|450005600|ref|ZP_21826761.1| DNA mismatch repair protein [Streptococcus mutans NMT4863]
gi|450088209|ref|ZP_21854688.1| DNA mismatch repair protein [Streptococcus mutans NV1996]
gi|449188391|gb|EMB90103.1| DNA mismatch repair protein [Streptococcus mutans NMT4863]
gi|449216758|gb|EMC16850.1| DNA mismatch repair protein [Streptococcus mutans NV1996]
gi|449252969|gb|EMC50936.1| DNA mismatch repair protein [Streptococcus mutans S1B]
Length = 651
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|450034421|ref|ZP_21834376.1| DNA mismatch repair protein [Streptococcus mutans M21]
gi|449196524|gb|EMB97789.1| DNA mismatch repair protein [Streptococcus mutans M21]
Length = 651
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLVIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I + EL T L +GI + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLI--KDGRELTKTAGKGDLHQALAGIYGITTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|307292184|ref|ZP_07572049.1| DNA mismatch repair protein [Enterococcus faecalis TX0411]
gi|306496759|gb|EFM66311.1| DNA mismatch repair protein [Enterococcus faecalis TX0411]
Length = 710
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 169/353 (47%), Gaps = 36/353 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L E + N + +G V+ VV+ELV N++DAG+T++ +++ ++++D+
Sbjct: 1 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+++ ++ +RHATSK+ DD I + GFRGEAL SI+ VS + + T
Sbjct: 61 GEGIAKEDVLNAFKRHATSKIH---TRDDLFRIRSLGFRGEALPSIASVSEMIVETATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV---GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
G ++KG K +++ R GT + +LFYN P R KY+++ + L ++
Sbjct: 118 EEEGSYVILKGGK-----VEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTE-LANI 171
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
V R+AL HPKV+F+ + +++ T + + +GI + ++ D
Sbjct: 172 GDIVNRLALSHPKVAFRLV--HDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
++GY+S P + + + + IN RY+ ++ N +
Sbjct: 230 DFTLTGYVSLPEVTRASRNYLSTIINGRYI-------------------KNFALNKAIVA 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G SK P +L + L D+ P K V + ++A IE+ I+
Sbjct: 271 GYGSKLMVGRFPIAVLEIEMDPLLVDVNVHPTKQEVRLSKEKDLMALIEQTIQ 323
>gi|224826520|ref|ZP_03699621.1| DNA mismatch repair protein MutL [Pseudogulbenkiania ferrooxidans
2002]
gi|224601121|gb|EEG07303.1| DNA mismatch repair protein MutL [Pseudogulbenkiania ferrooxidans
2002]
Length = 629
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 169/344 (49%), Gaps = 29/344 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I+ LP+ + N + +G V+ ++E++ NS+DAGA ++ V + ++V D+
Sbjct: 1 MKRIHALPDHLVNQIAAGEVVERPASALKEMLENSLDAGADRITVDLAQGGIKLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI D L L +RHATSK+ LAD++ + T GFRGE LASI+ VS L +I++ H
Sbjct: 61 GGGIVPDDLPLALDRHATSKIASLADLES---VATLGFRGEGLASIASVSRLTLISRPHE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ Y +++ L+ ++ GT+V DL++N P RRK+++S + H
Sbjct: 118 EAHAY-QIIAIDGALH-SVEPAAHAPGTSVEVVDLYFNTPARRKFLKSENTEYAHCA-AT 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDF-SFLDEVNANDGAL 238
RIAL HP+V F + +++ + S LA + + +DF + G L
Sbjct: 175 FERIALAHPQVEFL---LRHNGKVVWRLPAQS-LAERVGALLGKDFVEAALPLETAAGGL 230
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+++G+++SP S + + QY Y+N R+V L +A L
Sbjct: 231 QLAGFVASPTYSKASRDAQYFYVNGRFVRDKTAQHALR------------QAYRDVLHHD 278
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 342
R PAY L L + D+ P K V F++ + + F+
Sbjct: 279 RH-----PAYALFLTIDPAGVDVNVHPTKIEVRFRESQAIHQFL 317
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 25/175 (14%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L V+D HAA ERI E L++ + E S+ Q L+LP +FA D
Sbjct: 459 LIVVDMHAAHERIVYERLKNAL---EADSIPM----QPLLLP-------VSFA---ADRM 501
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQ-LADTDGSS 1303
+H G + L T I + VP V L D + +E + L D
Sbjct: 502 EAATVHEHGEEMKRLGVELAPLSPTQIAVRGVP----VWLKDGNPVELARAVLKDVREFG 557
Query: 1304 TTPPSVLR---VLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1355
T R +L + AC GA+ L +E ++ +++ T QC HGRPT
Sbjct: 558 LTRVLTERRNELLATMACHGAVRANRQLTLAEMNALLRDMEATERSGQCNHGRPT 612
>gi|194445394|ref|YP_002043614.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|418807991|ref|ZP_13363548.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418811724|ref|ZP_13367249.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418816730|ref|ZP_13372222.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418822320|ref|ZP_13377733.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418824758|ref|ZP_13380100.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|418833097|ref|ZP_13388030.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418833976|ref|ZP_13388887.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418841352|ref|ZP_13396171.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418848589|ref|ZP_13403327.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418854644|ref|ZP_13409312.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|238693596|sp|B4T2R5.1|MUTL_SALNS RecName: Full=DNA mismatch repair protein MutL
gi|194404057|gb|ACF64279.1| DNA mismatch repair protein MutL [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|392777819|gb|EJA34501.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392778292|gb|EJA34972.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392787995|gb|EJA44533.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392790091|gb|EJA46593.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392796566|gb|EJA52898.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392805884|gb|EJA61999.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392808681|gb|EJA64729.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392819955|gb|EJA75811.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392822889|gb|EJA78693.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392824499|gb|EJA80285.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
Length = 618
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 173/367 (47%), Gaps = 53/367 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT+V + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I ++ L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKEELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ K + + + + R
Sbjct: 120 AWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIRR 177
Query: 183 IALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+F K + D + E L C + L + IE
Sbjct: 178 IALARFDVTFNLSHNGKLVRQYRAVAKDGQKERRLGAICGTP----FLEQALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLRGWVADPNHTTTALTEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKK 353
S ++
Sbjct: 327 LSVLQQQ 333
>gi|292669798|ref|ZP_06603224.1| DNA mismatch repair protein MutL [Selenomonas noxia ATCC 43541]
gi|292648595|gb|EFF66567.1| DNA mismatch repair protein MutL [Selenomonas noxia ATCC 43541]
Length = 620
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 166/337 (49%), Gaps = 28/337 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+ELV N++DAGA V V + G +++V D+
Sbjct: 1 MTRIHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGAAAVEVEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++R RHATSK+ ++D+ + T GFRGEAL +I+ VS ++T+
Sbjct: 61 GHGMARADAQTAILRHATSKIASVSDLQ---MVATLGFRGEALPTIASVSRFSLLTRQPA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G K I+D ++GTTV DLF+N P R+K+++++ + +
Sbjct: 118 DDLGTRVDILGGKTPE--IEDAGCEIGTTVRVEDLFFNTPARKKFLKTNATEA-GRISDF 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA-- 237
V+R+AL P ++F+FI+ + L T S + S +G + + L ++ +D
Sbjct: 175 VIRLALSRPDIAFRFIN--NNRLTLMTAGDGSLRHAIESIYGGDAAAALIPLDFHDAEAD 232
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ I+GYIS P S +A+Q +N R + I K ++ + + GF
Sbjct: 233 IRITGYISKPSMIRSSRAWQTYIVNGRTIQNRAIAKAID------NVYRALVPKMGF--- 283
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD 334
P +L + P D+ P KT + F+D
Sbjct: 284 --------PLAVLCIEVPQRTIDVNVHPQKTELKFED 312
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 50/204 (24%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1215
+ QVD +I + TL +IDQHAA ERI + L H +LS +
Sbjct: 434 IGQVDLTYIIAQSAQTLYIIDQHAAHERILFDRFSAHADGIPSQQMLVHAILSFDAHEAQ 493
Query: 1216 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
Y++ EL +G+ L G R + L
Sbjct: 494 YIEENAEL-FDRLGFHL-----------------EPAGEREYR--------------LTE 521
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV--LNSKACRGAIMFGDSLLPSEC 1333
P ++ ++ + E L L D ++ P+ LR + + ACR AI G+ L +
Sbjct: 522 APADIPLDEAEATIREILISLGDLHAAT---PAHLRQAGIATMACRAAIKAGEELSIRQM 578
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTV 1357
++++EL+ T F C HGRPT +
Sbjct: 579 EILLDELRATPFPFTCPHGRPTIL 602
>gi|195978975|ref|YP_002124219.1| DNA mismatch repair protein [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|238689788|sp|B4U0J7.1|MUTL_STREM RecName: Full=DNA mismatch repair protein MutL
gi|195975680|gb|ACG63206.1| DNA mismatch repair protein MutL [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 660
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 191/413 (46%), Gaps = 45/413 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M TI LPE + N + +G V+ VV+ELV N++DA ++++ V + +++ D+
Sbjct: 1 MTTIIELPEVLANQIAAGEVIERPASVVKELVENAIDAKSSQITVEIEESGLKMMQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + L L RHATSK+ +D+ I T GFRGEAL S++ +S L I T
Sbjct: 61 GEGMSHEDLPLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSVASISKLTIKTATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G V G K L + VGT + +LFYN P R KYM+S ++ H V
Sbjct: 118 AEHGSILVASGGKIEQL--EAVSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHVV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPL-ALLISSFGIEDFSFLDEVNANDGAL 238
V R++L HP+++F I S+ + L S + L L +G+ + ++++ D
Sbjct: 175 VNRLSLAHPEIAFTLI---SDGKQLTQTSGTGDLRQALAGIYGLNTAKKMIDISSADLDF 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
E+ G++S P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVGGFVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 272
Query: 299 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAH 356
SK P +++++ L D+ P K + ++A I AI + ++
Sbjct: 273 GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEIRISKERELMALISTAISESLREQ--- 329
Query: 357 DSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC 405
D++ DA L S +S Q+S L S L Q++ F KE
Sbjct: 330 -----DLIPDALENLARSSTRSFSKPEQTSLPLQPSQLY-YDPQKNDFFTKET 376
>gi|320539679|ref|ZP_08039343.1| putative methyl-directed mismatch repair protein [Serratia
symbiotica str. Tucson]
gi|320030291|gb|EFW12306.1| putative methyl-directed mismatch repair protein [Serratia
symbiotica str. Tucson]
Length = 620
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 168/349 (48%), Gaps = 32/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT + + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATCIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK ++ +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARHATSK---ISTLDDLEAIVSLGFRGEALASISSVSRLSLTSRTAEQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ ++G + + VG+T+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYVEGCDQ-TVTVKPAAHPVGSTLAVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPL----ALLISSFGIEDFSFLDEVNANDGAL 238
IAL V+ I++ +L+ ++ L S G+ ++ G L
Sbjct: 178 IALARFDVA---INLSHNGKLIRQYRAAKEKNQHERRLSSICGLAFLQHALNLSWQHGEL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P + + QY Y+NSR + +L+NH A D K N
Sbjct: 235 SICGWVADPAGARQLGEIQYCYVNSRMMRD----RLINH-AIRQAYQDQLKDNQQ----- 284
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 285 -------PAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|423111894|ref|ZP_17099588.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5243]
gi|376375992|gb|EHS88777.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5243]
Length = 631
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 172/368 (46%), Gaps = 53/368 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVARLTLTSRTEDQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEIVRR 177
Query: 183 IALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ D + E L C L L + IE
Sbjct: 178 IALARFDVTINLSHNGKAVRQYRAVSQDGQRERRLGAICG----LPFLEHALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L +SG+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLSGWVADPLHTNPTLAEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L+ PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLKIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKI 354
S +++
Sbjct: 327 LSVLQQQL 334
>gi|340621607|ref|YP_004740059.1| DNA mismatch repair protein mutL [Capnocytophaga canimorsus Cc5]
gi|339901873|gb|AEK22952.1| DNA mismatch repair protein mutL [Capnocytophaga canimorsus Cc5]
Length = 608
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 168/349 (48%), Gaps = 27/349 (7%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV-FVYVGVCNCYVKVVDDGS 61
I LP+ V N + +G V+ V+EL+ N++DA +T++ + V+V+D+G
Sbjct: 4 VIRLLPDHVANQIAAGEVIQRPASAVKELLENAIDAQSTEIKLIIKDAGKTLVQVIDNGI 63
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
G+S L ERHATSK+ +D + T GFRGEALASI+ ++ +E+ITK
Sbjct: 64 GMSVTDARLAFERHATSKI---QSAEDLFTLRTKGFRGEALASIAAIAHVEMITKRAADE 120
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++GSK Y + GT+V ++LF+N P RR +++S ++ H + +
Sbjct: 121 LATEIRVEGSKFTYQ--EPCVAGNGTSVAMKNLFFNIPARRNFLKSDSVELRHIIDEF-H 177
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
R+AL HP + F + SE L S+ +++ FG++ L + ++IS
Sbjct: 178 RVALAHPNIHFYMYNNGSE---LFNLPVSNFRQRVVNLFGVKTNEKLVPIEEETPVVKIS 234
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G++ P K Q++ +N R++ + LNH A G L
Sbjct: 235 GFVVKPEHVKKTKPLQFLLVNDRFIRS----RYLNHAITL--------AYEGLL-----A 277
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
SQ P Y + L + D+ P KT + F+D + A ++ A++ A
Sbjct: 278 SQVQPEYFIRLEMNPATIDINIHPTKTEIKFEDEHTIYAMLKSAVKHAL 326
>gi|444914772|ref|ZP_21234912.1| DNA mismatch repair protein MutL [Cystobacter fuscus DSM 2262]
gi|444714281|gb|ELW55166.1| DNA mismatch repair protein MutL [Cystobacter fuscus DSM 2262]
Length = 620
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 169/357 (47%), Gaps = 30/357 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M + RL + + N + +G V+ VV+ELV NS+DAG+ V V + + + DD
Sbjct: 1 MARVARLSDVLINKIAAGEVVERPASVVKELVENSIDAGSRTVRVALERGGLGRITISDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S + L ERHATSK L ++DD + T GFRGEAL +I+ VS + T
Sbjct: 61 GQGMSAEDARLSLERHATSK---LRELDDLFTLSTKGFRGEALPAIASVSRFTLHTAERE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R ++G +++ VGT + DLFYN P RRK+M+ ++ H+ ++
Sbjct: 118 SYVGTRITVEGGGEPL--VEEAPPRVGTVISVEDLFYNTPARRKFMRRESTELQHA-EEA 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V+R+AL HP VSF F++ + S + + ++ G L V +
Sbjct: 175 VIRLALAHPDVSF-FVEHGGQALFTSPASPTDARERIAAALGPGVHPHLVAVEERRLGVN 233
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++GYI+SP ++ Y ++N RY+ + LN S +A FL R
Sbjct: 234 VTGYIASPEYTLPNARGIYTFVNRRYIRD----RGLN--------SAIQRAFQEFLAAGR 281
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-WM 351
P +L + D+ P K V F D + V A I RA+R+A W+
Sbjct: 282 Q-----PVVVLFIDMDPRAVDVNVHPQKLEVRFADAKGVGDAVNAAISRALRAAPWL 333
>gi|449919047|ref|ZP_21797683.1| DNA mismatch repair protein [Streptococcus mutans 1SM1]
gi|449159744|gb|EMB63056.1| DNA mismatch repair protein [Streptococcus mutans 1SM1]
Length = 651
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 36/352 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + ++V D+
Sbjct: 1 MSKIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + +++ RHATSK+ +D+ I T GFRGEAL SI+ +S L + T G
Sbjct: 61 GQGIEQADVIMSLRRHATSKIKKQSDL---FRIRTLGFRGEALPSIASISRLTLKTATKG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER---KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G + G K I+ E +GT V +LF+N P R KYM+S ++ H +
Sbjct: 118 EIHGTLLIANGGK-----IEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHII 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+++F I+ EL T L +G+ + E++ D
Sbjct: 173 -DVINRLSLAHPEIAFTLIN--DGRELTKTSGKGDLRQALAGIYGVTTAKKMVEISNADL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGYIS P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYISLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
G SK P +++++ L D+ P K V + ++ I AI
Sbjct: 271 GYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMNLISSAI 322
>gi|375258562|ref|YP_005017732.1| DNA mismatch repair protein [Klebsiella oxytoca KCTC 1686]
gi|365908040|gb|AEX03493.1| DNA mismatch repair protein [Klebsiella oxytoca KCTC 1686]
Length = 629
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 177/384 (46%), Gaps = 58/384 (15%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVARLTLTSRTEEQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEIVRR 177
Query: 183 IALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ D + E L C L L + IE
Sbjct: 178 IALARFDVTINLSHNGKAVRQYRAVSQDGQRERRLGAICG----LPFLEHALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L +SG+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLSGWVADPLHTNPTLAEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L+ PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLKIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKIAHDSFDVDMLEDAELP 370
S + +V + E+ + P
Sbjct: 327 LS-----VLQQQLEVPLAEEGDEP 345
>gi|338174364|ref|YP_004651174.1| DNA mismatch repair protein MutL [Parachlamydia acanthamoebae UV-7]
gi|336478722|emb|CCB85320.1| DNA mismatch repair protein mutL [Parachlamydia acanthamoebae UV-7]
Length = 620
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 172/368 (46%), Gaps = 47/368 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
+ I L E N + +G V+ + VV+E+V N++DAG+T++ V + +++ D+
Sbjct: 2 LSKIRILDEHTINKIAAGEVIENPASVVKEIVENAIDAGSTEICVEIQEGGRQLIRISDN 61
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+++D +L ERHATSKL + DM+ + T GFRGEA+ SI+ +S ++T
Sbjct: 62 GCGMTQDDALLSLERHATSKLREVEDME---ALATMGFRGEAIPSIAAISKFMLLT-CPA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDER-----KDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
P KG+ L G R + GTTV + LF+N PVRRK+ Q SP +
Sbjct: 118 TPESGSNDXKGTLILVEGGKILRCCPAARSPGTTVEIKSLFFNVPVRRKF-QKSPTYDAN 176
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ K + AL HP + F+ I + + LL T +S P +SF + + V +
Sbjct: 177 EILKILTMQALAHPDIQFELIS--NHETLLKTPTSKQP-----ASFAEKLSDRIGSVLGH 229
Query: 235 DGALE------------ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASF 282
D A E I+GYI P S +A Q+++IN R V I
Sbjct: 230 DLAQEICFIEGEKEGCKITGYIGFPSXSRPNRACQFLFINQRXVTSPAI----------- 278
Query: 283 DCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFI 342
S+ G+ G + P ++L+L P +L D+ P K V + + I
Sbjct: 279 ----SFAVREGY--GTALATNRHPLFILHLSLPGTLVDVNVHPQKKEVRLRQEAMIKELI 332
Query: 343 ERAIRSAW 350
A++ A
Sbjct: 333 ISAVQKAL 340
>gi|329115863|ref|ZP_08244580.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus parauberis NCFD 2020]
gi|326906268|gb|EGE53182.1| DNA mismatch repair protein, C-terminal domain protein
[Streptococcus parauberis NCFD 2020]
Length = 658
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 185/390 (47%), Gaps = 42/390 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DA ++++ + + + + D+
Sbjct: 1 MQKIVELPEVLANQIAAGEVIERPASVVKELVENAIDAKSSQITIEIEESGLKSITITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+S++ L L RHATSK+ + +D+ I T GFRGEAL SI+ +SLL I +
Sbjct: 61 GDGMSKEDLPLSLLRHATSKIKNQSDL---FRIRTLGFRGEALPSIASISLLTIKSATAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + + KG + I+ VGT + +LF+N P R KYM+S ++ H V
Sbjct: 118 ADYGNQLISKGGEV--ESIEPVSTPVGTKIKVENLFFNTPARLKYMKSLQAELAHIV-DV 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEVNANDGAL 238
V R++L HP+V+F I + L S ++ L I+ +GI + E++ D
Sbjct: 175 VNRLSLAHPEVAFTLI---CDGRELTKTSGTADLKQAIAGIYGINTAKKMVEISTADLDF 231
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
E+SG++S P + + + + + IN RY+ ++ N L G
Sbjct: 232 EVSGFVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILDGY 272
Query: 299 RSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-RSAWMKKIA 355
SK P +++++ L D+ P K V +++ I AI S ++ +
Sbjct: 273 GSKLMVGRFPIVVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISSAISESLRLQDLI 332
Query: 356 HDSFD---------VDMLEDAELPLESSRF 376
D+ + + E LPL++++
Sbjct: 333 PDALENLAKSTTRNNNKFEQTSLPLQANKI 362
>gi|319941732|ref|ZP_08016054.1| DNA mismatch repair protein MutL [Sutterella wadsworthensis
3_1_45B]
gi|319804665|gb|EFW01532.1| DNA mismatch repair protein MutL [Sutterella wadsworthensis
3_1_45B]
Length = 675
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 166/345 (48%), Gaps = 33/345 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I L + + + +G V+ VV+ELV N+VDAGA ++ V + G + V D+G G
Sbjct: 7 IAELSSQLISQIAAGEVIERPASVVKELVENAVDAGADRIEVRIDGGGLSRILVSDNGCG 66
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + L L +RHATSK+ LAD++ AT T GFRGEALAS+ V+ L I +KA G
Sbjct: 67 IPKAELPLAVKRHATSKVATLADLEAAT---TLGFRGEALASVDSVAELIIESKAAGAGE 123
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
+R + +G+ G+ GT V DLFY P RRK+M+S + H V + R
Sbjct: 124 AWR-IQRGAVEPAGGMTG-----GTRVEVTDLFYKTPARRKFMKSESTETAH-VTAQMER 176
Query: 183 IALVHPKVSFK-FIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
IAL +P+ +F + + +L + AL+ F V+A +++
Sbjct: 177 IALANPQAAFSLYANGRRAMQLEAESAEDRIKALMPKDFK----EACRPVSAESDGWKLT 232
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSK 301
G + P S + QY+++N R++ +++NH + A L G
Sbjct: 233 GLVGLPTISRTRADGQYLFVNGRFIR----DRVMNHAVRA--------AYADVLHG---- 276
Query: 302 SQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
QA P Y L L P D P KT V F+D V +FI A+
Sbjct: 277 -QAQPLYCLFLTIPPEEVDSNVHPTKTEVRFRDSSRVHSFILHAV 320
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 36/212 (16%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
+ L QV +I L ++D HAA ER+ E ++ + E K A QEL++P
Sbjct: 482 RALAQVAGVYILAENASGLVIVDMHAAAERVLYERMKRAM--AESKL-----AVQELLMP 534
Query: 1227 EI------GYQLLQNF--AEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC 1278
+ Y + F E G IC +G+ + L VP
Sbjct: 535 LVVRVTPAQYAAFEEFEKGEVFPALGLICTGADEGA----------------VALRGVPA 578
Query: 1279 IFG-VNLSDVDLL--EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1335
+ L +++ L E L LA+ S R+L++ AC A L E
Sbjct: 579 MIAEAPLGELEALLREVLDDLAEFGASEAMDVLKNRILSTMACHNAFRANRKLSLPEMDA 638
Query: 1336 IVEELKQTSLCFQCAHGRP--TTVPLVNLEAL 1365
++ ++++T QC HGRP TT+ + +L+ L
Sbjct: 639 LLRDMEKTERADQCNHGRPTWTTLSMTDLDRL 670
>gi|409387683|ref|ZP_11239863.1| DNA mismatch repair protein MutL [Lactococcus raffinolactis 4877]
gi|399205240|emb|CCK20778.1| DNA mismatch repair protein MutL [Lactococcus raffinolactis 4877]
Length = 643
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 170/352 (48%), Gaps = 32/352 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDDGSG 62
I L + + N + +G V+ VV+EL+ N++DA +T++ V + ++++D+G G
Sbjct: 10 IIELDDNLANKIAAGEVIERPASVVKELLENAIDAKSTQITVKIEESGLKSIEIIDNGEG 69
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA--HGR 120
I+ D + L +RHATSK + D+DD I T GFRGEAL SI+ VS L I T +G
Sbjct: 70 IAHDEVALALKRHATSK---IKDVDDLFRIRTLGFRGEALPSIASVSELTINTSVADNGD 126
Query: 121 PNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCV 180
+G V KG + + +R VGT + +LFYN P R KY++S ++ H + +
Sbjct: 127 ESGTLLVAKGGEIIQNSPAPKR--VGTRIKVENLFYNTPARLKYIKSLQAELGH-ITDII 183
Query: 181 LRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
R++L HP+V+F I+ E+ T + L +GI + ++A D ++
Sbjct: 184 NRLSLAHPEVAFTLIN--DGREMRKTAGTGDLKQALAGVYGISTAKKMIAISAQDLDFDV 241
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
+GY+S P + + + + V +N RY+ ++ N + G S
Sbjct: 242 TGYVSLPELTRANRNYITVLLNGRYI-------------------KNFLINRAIVDGYGS 282
Query: 301 KSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAW 350
K P +++++ L D+ P K V ++ I +AI A
Sbjct: 283 KLMVGRFPIAVIDIKIDPFLADVNVHPTKQEVRISKERELMGLISQAISQAL 334
>gi|295706199|ref|YP_003599274.1| DNA mismatch repair protein MutL [Bacillus megaterium DSM 319]
gi|294803858|gb|ADF40924.1| DNA mismatch repair protein MutL [Bacillus megaterium DSM 319]
Length = 625
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 181/392 (46%), Gaps = 41/392 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV N++DA +T + + + ++++D+
Sbjct: 1 MGKIVQLSDELSNKIAAGEVVERPASVVKELVENAIDANSTVIEIELEEAGLSKIRILDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + + +RHATSK+ D+ I T GFRGEAL SI+ VS+LE+ T G
Sbjct: 61 GDGIASEDCLTAFKRHATSKIKTEQDL---FRIRTLGFRGEALPSIASVSMLELKTST-G 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G ++G + ++ + RK GT +V +LF+N P R KYM++ + L +V
Sbjct: 117 EEAGTHLKLRGGEIVHHELTSSRK--GTELVIENLFFNTPARLKYMKTVNTE-LGNVTDV 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+A+ HP+VS + M +LL T S +L + +G+ + +N E
Sbjct: 174 VNRLAMSHPEVSIRL--MHQGRQLLYTNGSGDVRQVLAAIYGMAVAKKMIPINVQSLDYE 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++GY++ P + + + + IN R+V N G LK +
Sbjct: 232 VNGYVALPEITRASRNYMSTIINGRFV-----------------------KNYGLLKAVQ 268
Query: 300 SKSQAC------PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK- 352
P L + L D+ P K V + IE+ +++A+ K
Sbjct: 269 QGYHTLLPIGRFPIVFLTITMDPLLVDVNVHPAKLEVRLSKEAELFELIEQGVKAAFKKQ 328
Query: 353 KIAHDSFDVDMLEDAELPLESSRFQ-SHQSST 383
++ D+ + A P E F HQS T
Sbjct: 329 QLIPDAVVPTKSKSAVQPTEQQTFTFDHQSKT 360
>gi|423117550|ref|ZP_17105241.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5245]
gi|376375680|gb|EHS88466.1| DNA mismatch repair protein mutL [Klebsiella oxytoca 10-5245]
Length = 631
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 172/368 (46%), Gaps = 53/368 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVARLTLTSRTEDQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEIVRR 177
Query: 183 IALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ D + E L C L L + IE
Sbjct: 178 IALARFDVTINLSHNGKAVRQYRAVSQDGQRERRLGAICG----LPFLEHALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L +SG+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLSGWVADPLHTNPTLAEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L+ PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLKIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKI 354
S +++
Sbjct: 327 LSVLQQQL 334
>gi|422343284|ref|ZP_16424212.1| hypothetical protein HMPREF9432_00272 [Selenomonas noxia F0398]
gi|355378591|gb|EHG25771.1| hypothetical protein HMPREF9432_00272 [Selenomonas noxia F0398]
Length = 621
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 166/337 (49%), Gaps = 28/337 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I+ L + N + +G V+ VV+ELV N++DAGA V V + G +++V D+
Sbjct: 1 MTRIHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGAAAVEVEIMGGGTSFIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++R RHATSK+ ++D+ + T GFRGEAL +I+ VS ++T+
Sbjct: 61 GHGMARADAQTAILRHATSKIASVSDLQT---VATLGFRGEALPTIASVSRFSLLTRQPA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G R + G K I+D ++GTTV DLF+N P R+K+++++ + +
Sbjct: 118 DDLGTRVDILGGKTPE--IEDAGCEIGTTVRVEDLFFNTPARKKFLKTNATEA-GRISDF 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA-- 237
V+R+AL P ++F+FI+ + L T S + S +G + + L ++ +D
Sbjct: 175 VIRLALSRPDIAFRFIN--NNRLTLMTAGDGSLHHTIESIYGGDAAAALIPLDFHDAEAD 232
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ I+GYIS P S +A+Q +N R + I K ++ + + GF
Sbjct: 233 IRITGYISKPSMIRSSRAWQTYIVNGRTIQNRAIAKAID------NVYRALVPKMGF--- 283
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD 334
P +L + P D+ P KT + F+D
Sbjct: 284 --------PLAVLCIEVPQRTIDVNVHPQKTELKFED 312
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 80/204 (39%), Gaps = 50/204 (24%)
Query: 1169 LQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-------------LRHKVLSGEGKSVA 1215
+ QVD +I + TL +IDQHAA ERI + L H +LS +
Sbjct: 435 IGQVDLTYIIAQSAQTLYIIDQHAAHERILFDRFSAHADGIPSQQMLVHAILSFDAHEAQ 494
Query: 1216 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1275
Y++ EL +G+ L G R + L
Sbjct: 495 YIEENAEL-FDRLGFHL-----------------EPAGEREYR--------------LTE 522
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRV--LNSKACRGAIMFGDSLLPSEC 1333
P ++ ++ + E L L D ++ P+ LR + + ACR AI G+ L +
Sbjct: 523 APADIPLDEAEATIREILISLGDLHAAT---PAHLRQAGIATMACRAAIKAGEELSIRQM 579
Query: 1334 ALIVEELKQTSLCFQCAHGRPTTV 1357
+++ EL T F C HGRPT +
Sbjct: 580 EILLAELCATPFPFTCPHGRPTIL 603
>gi|291550403|emb|CBL26665.1| DNA mismatch repair protein MutL [Ruminococcus torques L2-14]
Length = 708
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 154/276 (55%), Gaps = 13/276 (4%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I+ L + + + +G V+ +V+ELV N++DAG+T V + + G+ ++++
Sbjct: 1 MPHIHVLDQITIDKIAAGEVIERPASIVKELVENAIDAGSTSVKIEIKDGGIS--FIRIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G GI +D + RH+TSK+ + D+ + I + GFRGEAL+SI+ V+ E+ITK
Sbjct: 59 DNGCGIPQDEVQRAFLRHSTSKIETVEDL---SHIASLGFRGEALSSIAAVTRTELITKT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G R V++G K + L +D GTT + LFYN P RRK++++ + H V+
Sbjct: 116 ADAEFGTRYVIEGGKEVSL--EDTGAPNGTTFLVHQLFYNVPARRKFLKTPMTEAGH-VQ 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
++ +AL HP+V+F+F++ + E L T + ++ + +G + + L E++
Sbjct: 173 DLLMHLALSHPEVAFQFLN--NGQEKLRTSGNGKLKDVIYNVYGRDVAANLIEIDYEKNG 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHK 273
+ I+G++ P + + F+ ++N RYV I K
Sbjct: 231 IHITGFLGKPIITRGNRNFENFFVNGRYVKSAMISK 266
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 122/306 (39%), Gaps = 32/306 (10%)
Query: 1076 SSTILDLEETHKAENFKLSLCPHAHLGAQAEGTSII--SGTKWRNGHPQ------TTNNN 1127
S+ + D +E +A+ K + H +A ++ + + P TT+ +
Sbjct: 424 SAEVADRKEIFRADEQKDKIAEHVKYAVEAADKTVAPETAATVQKSKPAIEMQTATTSTD 483
Query: 1128 ISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAV 1187
+ D D + +G + F + + + + K++ QV + V L +
Sbjct: 484 AASDCEITDAKSEPENGT---QMDLFEENFLKRDIRAEYKLIGQVFDTYWLVEFKDNLYI 540
Query: 1188 IDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWIC 1247
IDQHAA ER+ E ++ S E S YL L L QLL ++ G+
Sbjct: 541 IDQHAAHERVLYERTLREMKSREFTS-QYLSPPIILSLSMQEAQLLNENMDRFSRIGF-- 597
Query: 1248 NIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLSDVDLLEFLQQLADTDGSSTTP 1306
I G + + AVP +F + ++ L+E + L + +S TP
Sbjct: 598 EIEPFGGEEY--------------AVRAVPDNLFSIAKKEL-LMEMIDDLTEGLSTSMTP 642
Query: 1307 PSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV--NLEA 1364
+ + S +C+ A+ + L E ++ EL + C HGRPT + + +LE
Sbjct: 643 ELIDEKVASLSCKAAVKGNNRLSAQEVDKLIGELLTLDNPYHCPHGRPTIIAMTKRDLEK 702
Query: 1365 LHKQIA 1370
K+I
Sbjct: 703 KFKRIV 708
>gi|449047748|ref|ZP_21730983.1| DNA mismatch repair protein [Klebsiella pneumoniae hvKP1]
gi|448877356|gb|EMB12323.1| DNA mismatch repair protein [Klebsiella pneumoniae hvKP1]
Length = 619
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 172/368 (46%), Gaps = 53/368 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ D + E L C + A L + IE
Sbjct: 178 IALARFDVTINLSHNGKVMRQYRAVAQDGQRERRLGTICGA----AFLEHALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLRGWVADPLHTTPALAEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKI 354
S +++
Sbjct: 327 LSVLQQQL 334
>gi|374386353|ref|ZP_09643853.1| DNA mismatch repair protein MutL [Odoribacter laneus YIT 12061]
gi|373224282|gb|EHP46622.1| DNA mismatch repair protein MutL [Odoribacter laneus YIT 12061]
Length = 617
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 27/366 (7%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP++V N + +G V+ VV+EL+ N++DAGA + V + V +++V+D+G G
Sbjct: 5 IQLLPDSVANQIAAGEVVQRPASVVKELMENAIDAGADHIQVVLKNVGKAFIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S + ERHATSK +A D I T GFRGEAL SI+ V+ +E+ T+
Sbjct: 65 MSPLDARMAFERHATSK---IASAQDLFNIHTLGFRGEALPSIASVAEIELKTRRSEDEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G + S+ + +GT + ++LF+N P RRK+++S + L +V LR
Sbjct: 122 GSYVRIAASEL--KSQESVNTPLGTNICVKNLFFNIPARRKFLKSDATE-LRNVINEFLR 178
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEISG 242
+AL +P+V+ I+ +E + S +++ FG S L +N + + I G
Sbjct: 179 LALTYPEVTLSLINNGNE---VYNLPVSGLRQRIVNVFGKSINSRLLNINCDTELISIKG 235
Query: 243 YISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKS 302
++ SP + QY ++N+R++ HK + +A +G + +
Sbjct: 236 FVCSPEHAKKTYGEQYFFVNNRFMKHNFFHKAV------------MEAYSGLI-----SA 278
Query: 303 QACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVD 362
P+Y L S D+ P KT + F++ + + ++ A K D D
Sbjct: 279 DCIPSYFLYFTVQPSQIDVNIHPTKTEIKFQNESDLFQILLAGVKEALGKFNVTPPLDFD 338
Query: 363 MLEDAE 368
D E
Sbjct: 339 REGDIE 344
>gi|22538232|ref|NP_689083.1| DNA mismatch repair protein [Streptococcus agalactiae 2603V/R]
gi|77414024|ref|ZP_00790195.1| DNA mismatch repair protein HexB [Streptococcus agalactiae 515]
gi|22535144|gb|AAN00956.1|AE014286_19 DNA mismatch repair protein HexB [Streptococcus agalactiae 2603V/R]
gi|77159906|gb|EAO71046.1| DNA mismatch repair protein HexB [Streptococcus agalactiae 515]
Length = 659
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 169/354 (47%), Gaps = 40/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
+ I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 3 LSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 62
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + VL RHATSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 63 GEGMTSEDAVLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATEQ 119
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++ H
Sbjct: 120 GKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELAH 172
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ V R++L HP+V+F I+ E+ T + + +G+ + E++
Sbjct: 173 II-DIVNRLSLAHPEVAFTLIN--DGKEMTKTSGTGDLRQAIAGIYGLNTAKKMIEISNA 229
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 230 DLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRSI 270
Query: 295 LKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 271 LDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISTAI 324
>gi|453065059|gb|EMF06023.1| DNA mismatch repair protein [Serratia marcescens VGH107]
Length = 627
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 171/349 (48%), Gaps = 32/349 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK ++ +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IGKDDLALALARHATSK---ISTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTADQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + VG+T+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEGREQ-AVTVKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLD---EVNANDGAL 238
IAL V+ I++ +L+ ++ + G I +FL ++ G L
Sbjct: 178 IALARFDVA---INLSHNGKLIRQYRAAKEESQHERRLGSICGPAFLQHALNIDWQHGDL 234
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+++ P + + QY Y+NSR + +L+NH A D K +
Sbjct: 235 NIRGWVADPDGARQLGEMQYCYVNSRMMRD----RLINH-AIRQAYQDQLKDDQQ----- 284
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
PAY+L L PH + D+ P K V F V FI +A+
Sbjct: 285 -------PAYVLYLEVDPHQV-DVNVHPAKHEVRFHQARLVHDFIYQAV 325
>gi|385786061|ref|YP_005817170.1| DNA mismatch repair protein [Erwinia sp. Ejp617]
gi|310765333|gb|ADP10283.1| DNA mismatch repair protein [Erwinia sp. Ejp617]
Length = 608
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 176/381 (46%), Gaps = 52/381 (13%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L + RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IDKDELAMALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTEAQSE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + + R
Sbjct: 120 AWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTH-IDEIIRR 177
Query: 183 IALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ K + D + E L C + A L +
Sbjct: 178 IALARFDVAISLSHNGKLVRQYRAVSDDGQRERRLGAICGT----AFLTHAL-------- 225
Query: 229 DEVNANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSW 288
++ L + G+++ P S ++ QY Y+N R + +L+NH A D
Sbjct: 226 -KIAWQHSELSLHGWVADPVGSKALSELQYCYVNGRMMRD----RLINH-AIRQAYQDKL 279
Query: 289 KANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
G R + PAY+L L PH + D+ P K V F V FI + +
Sbjct: 280 --------GDRHQ----PAYVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVI 326
Query: 348 SAWMKKIAHDSFDVDMLEDAE 368
S + A ++ ++ AE
Sbjct: 327 SVLQESGAETLPEIATVQPAE 347
>gi|259502856|ref|ZP_05745758.1| DNA mismatch repair protein HexB [Lactobacillus antri DSM 16041]
gi|259169223|gb|EEW53718.1| DNA mismatch repair protein HexB [Lactobacillus antri DSM 16041]
Length = 675
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 175/367 (47%), Gaps = 36/367 (9%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I+ L + + + + +G V+ +V+ELV NS+DA + +V + V ++V+DD
Sbjct: 1 MGQIHELNDILADQIAAGEVIERPASIVKELVENSLDAQSQRVDIIVENAGLDSIRVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L +RHATSK+ D+ + T GFRGEAL SI+ V+ +E+ T G
Sbjct: 61 GQGIAADDVELAFKRHATSKISSRHDL---FRVQTMGFRGEALPSIASVADVELTTAVAG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G ++G + + R+ GT V +LF+N P R KY++ SP L +
Sbjct: 118 ATAGRLVHLRGGELVANQPAPARR--GTDVRVTELFFNTPARLKYLK-SPHTELARITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+AL +P+V+F F + EL + + + ++ + +GI+ + + D
Sbjct: 175 INRLALANPQVAFSF--THNGKELFRSAGNGNLQQVIATIYGIQAGRKMLAIQGTDNDFA 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
++G++S P + + + + + IN RYV ++ ++G
Sbjct: 233 VTGFVSLPELTRASRQYITIMINHRYV-------------------RNYALTKAIIQGYE 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P +LN+ L D+ P K V + + I + IR ++IA +
Sbjct: 274 SKLMVGRYPVAVLNIELDPVLVDVNVHPAKREVRLSKEDQLAKLIAQTIR----QRIARE 329
Query: 358 SF--DVD 362
+ DVD
Sbjct: 330 NLIPDVD 336
>gi|294500853|ref|YP_003564553.1| DNA mismatch repair protein MutL [Bacillus megaterium QM B1551]
gi|294350790|gb|ADE71119.1| DNA mismatch repair protein MutL [Bacillus megaterium QM B1551]
Length = 625
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 177/380 (46%), Gaps = 47/380 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV N++DA +T + + + ++++D+
Sbjct: 1 MGKIVQLSDELSNKIAAGEVVERPASVVKELVENAIDANSTVIEIELEEAGLSKIRILDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + + +RHATSK+ D+ I T GFRGEAL SI+ VS+LE+ T G
Sbjct: 61 GDGIASEDCLTAFKRHATSKIKTEQDL---FRIRTLGFRGEALPSIASVSMLELKTST-G 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G ++G + ++ + RK GT +V +LF+N P R KYM++ + L +V
Sbjct: 117 EEAGTHLKLRGGEIVHHELTSSRK--GTELVIENLFFNTPARLKYMKTVNTE-LGNVTDV 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+A+ HP+VS + M +LL T S +L + +G+ + +N E
Sbjct: 174 VNRLAMSHPEVSIRL--MHQGRQLLYTNGSGDVRQVLAAIYGMAVARKMIPINVQSLDYE 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
+SGY++ P + + + + IN R+V N G LK +
Sbjct: 232 VSGYVALPEITRASRNYMSTIINGRFV-----------------------KNYGLLKAVQ 268
Query: 300 SKSQAC------PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 353
P L + L D+ P K V + IE+ +++A+ K+
Sbjct: 269 QGYHTLLPIGRFPIVFLTITMDPLLVDVNVHPAKLEVRLSKEAELFELIEQGVKAAFKKQ 328
Query: 354 IAHDSFDVDMLEDAELPLES 373
++ DA +P +S
Sbjct: 329 --------QLIPDAVVPTKS 340
>gi|238892654|ref|YP_002917388.1| DNA mismatch repair protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402782836|ref|YP_006638382.1| DNA mismatch repair protein MutL [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|238544970|dbj|BAH61321.1| DNA mismatch repair protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402543684|gb|AFQ67833.1| DNA mismatch repair protein MutL [Klebsiella pneumoniae subsp.
pneumoniae 1084]
Length = 619
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 172/368 (46%), Gaps = 53/368 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+GSG
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS V+ L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + VGTT+ DLFYN P RRK+M++ + H + + V R
Sbjct: 120 AWQAYAEG-RDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFI--------------DMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+ D + E L C + A L + IE
Sbjct: 178 IALARFDVTINLSHNGKVMRQYRAVAQDGQRERRLGTICGA----AFLEHALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLRGWVADPLHTTPALAEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKKI 354
S +++
Sbjct: 327 LSVLQQQL 334
>gi|336253507|ref|YP_004596614.1| DNA mismatch repair protein mutL [Halopiger xanaduensis SH-6]
gi|335337496|gb|AEH36735.1| DNA mismatch repair protein mutL [Halopiger xanaduensis SH-6]
Length = 737
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 164/361 (45%), Gaps = 40/361 (11%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I RL E + +G V+ V+ELV NS+DA A +V V V ++V DDG G
Sbjct: 7 IRRLDEDTVARIAAGEVVERPASAVKELVENSLDADANRVDVTVEEGGTELIRVADDGRG 66
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
++ L H TSK+ L D++ +G+ T GFRGEAL +I VS L I + RP
Sbjct: 67 MNEADLRAAVREHTTSKIEGLEDLE--SGVRTLGFRGEALHTIGSVSRLTICS----RPR 120
Query: 123 GYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G G++ +Y G D + GTTV DLFYN P RRK+++++ + H V
Sbjct: 121 GADGA--GTELVYEGGDVTSVEPVGCPEGTTVEVEDLFYNTPARRKFLKTTATEFAH-VN 177
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ V R AL +P V+ + E+ T A ++S +G E S + V A++
Sbjct: 178 RVVTRYALANPDVAVSL--THDDREVFATTGQGDLQAAVLSVYGREVASSMIRVEADEDE 235
Query: 238 L------EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 291
L +SG +S P + S + + Y+N R V I + + A
Sbjct: 236 LPPGPVDAVSGLVSHPETNRSSREYLATYVNGRAVTADAIREGI------------MGAY 283
Query: 292 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
L G R P +L L P D+ P K V F D + V I+ A+ SA +
Sbjct: 284 GTQLGGDR-----YPFVVLFLEVPGDAVDVNVHPRKREVRFDDDDAVRRQIDAAVESALL 338
Query: 352 K 352
+
Sbjct: 339 E 339
Score = 49.7 bits (117), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 79/213 (37%), Gaps = 21/213 (9%)
Query: 1148 LTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVL 1207
L G+ D + L +VL Q D ++ LA++DQHAADER+ E LR
Sbjct: 523 LAGDPATGDETDFDSLPPLRVLGQFDDTYLVCETPDGLALVDQHAADERVNYERLRDAF- 581
Query: 1208 SGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQ 1267
+ + L + EL L + + + ++ G+ + + R
Sbjct: 582 -ADDPAAQALASPVELELTAAEAEAFAGYEDALERLGFYAD-------------RVDDRT 627
Query: 1268 ITVITLLAVPCIFGVNLSDVDLLEFLQQLADTD---GSSTTPPSVLRVLNSKACRGAIMF 1324
I V T VP + L +L + L + D G+ T L AC ++
Sbjct: 628 IAVTT---VPAVLEETLEPENLRDVLTSFIEGDREAGAETVDALADEFLGDLACYPSLTG 684
Query: 1325 GDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1357
SL ++ L + C HGRP V
Sbjct: 685 NTSLTEGSVVDLLSRLDDCENPYSCPHGRPVIV 717
>gi|77405115|ref|ZP_00782214.1| DNA mismatch repair protein HexB [Streptococcus agalactiae H36B]
gi|77410860|ref|ZP_00787217.1| DNA mismatch repair protein HexB [Streptococcus agalactiae CJB111]
gi|77163078|gb|EAO74032.1| DNA mismatch repair protein HexB [Streptococcus agalactiae CJB111]
gi|77176258|gb|EAO79028.1| DNA mismatch repair protein HexB [Streptococcus agalactiae H36B]
Length = 659
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 169/354 (47%), Gaps = 40/354 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
+ I LP+ + N + +G V+ + VV+ELV N++DAG++++ + V +++ D+
Sbjct: 3 LSKIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDN 62
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++ + VL RHATSK+ +D+ I T GFRGEAL SI+ +SL+ I T
Sbjct: 63 GEGMTSEDAVLSLRRHATSKIKSQSDL---FRIRTLGFRGEALPSIASISLMTIKTATEQ 119
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDV-----GTTVVSRDLFYNQPVRRKYMQSSPKKVLH 174
G V KG E+++V GT ++ +LF+N P R KYM+S ++ H
Sbjct: 120 GKQGTLLVAKGGNI-------EKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELAH 172
Query: 175 SVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNAN 234
+ V R++L HP+V+F I+ E+ T + + +G+ + E++
Sbjct: 173 II-DIVNRLSLAHPEVAFTLIN--DGKEMTKTSGTGDLRQAIAGIYGLNTAKKMIEISNA 229
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
D EISGY+S P + + + + + IN RY+ ++ N
Sbjct: 230 DLDFEISGYVSLPELTRANRNYITLLINGRYI-------------------KNFLLNRSI 270
Query: 295 LKGKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
L G SK P +++++ L D+ P K V +++ I AI
Sbjct: 271 LDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLISSAI 324
>gi|432444144|ref|ZP_19686458.1| DNA mismatch repair protein mutL [Escherichia coli KTE191]
gi|433026127|ref|ZP_20214084.1| DNA mismatch repair protein mutL [Escherichia coli KTE106]
gi|433326149|ref|ZP_20403063.1| DNA mismatch repair protein [Escherichia coli J96]
gi|430977433|gb|ELC94270.1| DNA mismatch repair protein mutL [Escherichia coli KTE191]
gi|431528102|gb|ELI04811.1| DNA mismatch repair protein mutL [Escherichia coli KTE106]
gi|432345623|gb|ELL40123.1| DNA mismatch repair protein [Escherichia coli J96]
Length = 615
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 179/358 (50%), Gaps = 33/358 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I +D L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKDELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK++++ K + + + + R
Sbjct: 120 AWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTE-KTEFNHIDEIIRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFG-IEDFSFLDEVNAND---GAL 238
IAL V+ I++ +++ + S G I +FL++ A + G L
Sbjct: 178 IALARFDVT---INLSHNGKIVRQYRAVSEGGQKERRLGAICGTAFLEQALAIEWQHGDL 234
Query: 239 EISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ G+++ P + + ++ QY Y+N R + +L+NH A C D +A+
Sbjct: 235 TLRGWVADPNHTTPALAEIQYCYVNGRMMRD----RLINH-AIRQACEDKLRADQQ---- 285
Query: 298 KRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
PA++L L PH + D+ P K V F V FI + + S +++
Sbjct: 286 --------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL 334
>gi|407009368|gb|EKE24519.1| hypothetical protein ACD_6C00100G0007 [uncultured bacterium]
Length = 655
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 181/398 (45%), Gaps = 39/398 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVC-NCYVKVVDDGSG 62
I L A+ N + +G V+ VV+EL+ NS+DAGAT++ + V + ++++D+G G
Sbjct: 10 IRALDPALANQIAAGEVIERPASVVKELLENSIDAGATELIIRVEQGGSTLIEIIDNGRG 69
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I + L L RHATSK+ +D+ I + GFRGEALASI+ VS L +I+
Sbjct: 70 IHHEDLPLAVMRHATSKI---QSVDELYAISSLGFRGEALASIAAVSRLTMISSQSDEGI 126
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
GY+ + G+ + I GT + +DLF+N P RRK+++ P +++ V R
Sbjct: 127 GYQVEVNGTAFDHQEIQAVAASKGTHIRVQDLFFNVPARRKFLK-KPGTEFGHIEEIVRR 185
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSS----PLALLISSFGIEDFSFLDEVNANDGAL 238
+AL H + F ES L S + + L+ E+ ++D + N +
Sbjct: 186 MALTHFDIRFVLEHNESIKLNLPVADSGALRFQRVQQLLGRQFTENAYWMDADSIN---M 242
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+SG++ P D+ + QYVY+N R V I L A +G L G
Sbjct: 243 RLSGWLGHPSDARAQADLQYVYVNGRIVKDKTISHALR------------MAYDGILHGH 290
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK-KIAHD 357
+ AYLL L D+ P K + F + V F+ + + + A
Sbjct: 291 QH-----AAYLLFLEVDPENVDVNVHPTKHEIRFLNQREVHEFVRHYAKETLAQFQTATA 345
Query: 358 SFDVDMLEDAEL------PLESSRFQSHQSSTHLHSSP 389
M +D +L P +F HQ++ HS P
Sbjct: 346 DLAEAMKQDQQLNFVAPQPRYQEQFSLHQTA---HSQP 380
Score = 48.1 bits (113), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 32/199 (16%)
Query: 1177 IPVVAGGT--LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI------ 1228
I ++A T L ++D HAA ERI L++++ S K + Q+L++P++
Sbjct: 474 IYILAQNTEGLIIVDMHAAHERIVLQQMK----SAWDKPEFW--TSQQLLIPKVVNISRM 527
Query: 1229 GYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVD 1288
++ EQ+ G L + Q + + VP I D
Sbjct: 528 QAMRVEELKEQLARLG----------------LEIDQYGDEQVIVRGVPAILHKADFDAL 571
Query: 1289 LLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQ 1348
+ E L L D + + ++L AC GA+ L SE ++ +++QT Q
Sbjct: 572 IPELLNDLDPGDQAQSLLQKRDQILAGMACHGAVRAHRILSLSEMNALLRQMEQTEFASQ 631
Query: 1349 CAHGRPT--TVPLVNLEAL 1365
C HGRPT PL L+ L
Sbjct: 632 CNHGRPTWRAFPLAQLDKL 650
>gi|386388585|ref|ZP_10073444.1| DNA mismatch repair protein [Haemophilus paraphrohaemolyticus
HK411]
gi|385697607|gb|EIG28024.1| DNA mismatch repair protein [Haemophilus paraphrohaemolyticus
HK411]
Length = 642
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 164/353 (46%), Gaps = 32/353 (9%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
IN LP + N + +G V+ VV+ELV NS+DAGAT++ + + +K+ D+G G
Sbjct: 11 INILPPQLANQIAAGEVVERPASVVKELVENSLDAGATQIEIEIEKGGSQLIKIRDNGCG 70
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I++ LVL RHATSK+ L D++ I + GFRGEALASIS VS L + ++ G+
Sbjct: 71 IAKQDLVLALARHATSKISSLEDLE---AILSLGFRGEALASISSVSRLLLTSRPEGQAE 127
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + I VGTT+ +LF+N P RRK++++ + H + + V R
Sbjct: 128 AWQAYAQGRE-MVVDIQPASHPVGTTIEVNNLFFNTPARRKFLRTDKTEFQH-IDEVVRR 185
Query: 183 IALVHPKVSF------KFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
IAL P VSF K + + +A + I+ ++LD G
Sbjct: 186 IALAKPHVSFTLSHNDKIVRQYRKTVDNSIEQKQKRVAAICGEQFIQHANYLD---WQHG 242
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
L + G+I SP Y Y+N R + K +NH
Sbjct: 243 DLHLHGWIGSPELDRPQNDLCYSYVNGRMMRD----KTINHAIRQ-------------AY 285
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
G+ PA++L L + D+ P K V F V FI + + A
Sbjct: 286 GEHIAQGDYPAFVLFLDLDPTHVDVNVHPAKHEVRFHQGRLVHDFILQGVLQA 338
>gi|416506457|ref|ZP_11734675.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416519648|ref|ZP_11739963.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416563850|ref|ZP_11762910.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363555055|gb|EHL39287.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363557409|gb|EHL41615.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363571394|gb|EHL55305.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
Length = 618
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 173/367 (47%), Gaps = 53/367 (14%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LP + N + +G V+ VV+ELV NS+DAGAT+V + + +++ D+G G
Sbjct: 3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
I ++ L L RHATSK +A +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 IKKEELALALARHATSK---IASLDDLEAIISLGFRGEALASISSVSRLMLTSRTAEQAE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VGTT+ DLFYN P RRK+M++ K + + + + R
Sbjct: 120 AWQAYAEG-RDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTE-KTEFNHIDEIIRR 177
Query: 183 IALVHPKVSF------KFI--------DMESEDELLCTCSSSSPLALLISSFGIEDFSFL 228
IAL V+F K + D + E L C + L + IE
Sbjct: 178 IALARFDVTFNLSHNGKLVRQYRAVAKDGQKERRLGAICGTP----FLEQALAIE----- 228
Query: 229 DEVNANDGALEISGYISSP-YDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDS 287
G L + G+++ P + + ++ QY Y+N R + +L+NH A C D
Sbjct: 229 ----WQHGDLTLRGWVADPNHTTTALTEIQYCYVNGRMMRD----RLINH-AIRQACEDK 279
Query: 288 WKANNGFLKGKRSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A+ PA++L L PH + D+ P K V F V FI + +
Sbjct: 280 LGADQQ------------PAFVLYLEIDPHQV-DVNVHPAKHEVRFHQSRLVHDFIYQGV 326
Query: 347 RSAWMKK 353
S ++
Sbjct: 327 LSVLQQQ 333
>gi|146294369|ref|YP_001184793.1| DNA mismatch repair protein [Shewanella putrefaciens CN-32]
gi|145566059|gb|ABP76994.1| DNA mismatch repair protein MutL [Shewanella putrefaciens CN-32]
Length = 641
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 171/352 (48%), Gaps = 29/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I LP + N + +G V+ VV+ELV NS+DAGAT++ + + +K+ D+
Sbjct: 5 MG-IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDN 63
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSGI ++ L L RHATSKL L DD I +FGFRGEALASIS VS L + ++
Sbjct: 64 GSGIPKEELTLALSRHATSKLHSL---DDLEAILSFGFRGEALASISSVSRLTLTSRTAE 120
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ ++ +G + + I VG+T+ + DLF+N P RR++++S + H + +
Sbjct: 121 QTEAWQAYAEGVD-MAVKIMPAAHPVGSTIEAVDLFFNTPARRRFLKSDKTEFTH-IDEW 178
Query: 180 VLRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
+ RIALV + F + + + S L L G + ++ L
Sbjct: 179 LKRIALVRGDIHFTLTHNGKLVRNYRPAVNESQYLQRLTQVSGRQFAEHALKIECQHDDL 238
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
+SGY+ SP+ ++ + Y Y+N R + +L+NH A K
Sbjct: 239 RLSGYLQSPWSTV-LTDTHYFYVNGRLIRD----RLVNH------------AVRQAFAHK 281
Query: 299 RSKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
Q P Y+L L PH + D+ P K V F V +I +A++SA
Sbjct: 282 AEIEQ--PGYVLMLEIDPHQV-DVNVHPAKHEVRFHQSRYVHDYILQALQSA 330
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,789,508,084
Number of Sequences: 23463169
Number of extensions: 1000456696
Number of successful extensions: 2151620
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2743
Number of HSP's successfully gapped in prelim test: 2710
Number of HSP's that attempted gapping in prelim test: 2120641
Number of HSP's gapped (non-prelim): 12192
length of query: 1402
length of database: 8,064,228,071
effective HSP length: 156
effective length of query: 1246
effective length of database: 8,698,941,003
effective search space: 10838880489738
effective search space used: 10838880489738
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 84 (37.0 bits)