BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000593
(1402 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UHC1|MLH3_HUMAN DNA mismatch repair protein Mlh3 OS=Homo sapiens GN=MLH3 PE=1 SV=3
Length = 1453
Score = 154 bits (389), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 16/352 (4%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCYVKVVDDGSGI 63
I L V+ +RSG + L + VEEL NS+DA A V V V + V+V+D+G G+
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQVQVIDNGFGM 61
Query: 64 SRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDV-SLLEIITKAHGRPN 122
D + +G R+ TSK + D+++ +GFRGEALA+I+D+ S +EI +K +
Sbjct: 62 GSDDVEKVGNRYFTSKCHSVQDLENPR---FYGFRGEALANIADMASAVEISSKKNRTMK 118
Query: 123 GYRKVMKGSKCL-YLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
+ K+ + K L D R GTTV +LFY PVRRK M P+ V++ +
Sbjct: 119 TFVKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCM--DPRLEFEKVRQRIE 176
Query: 182 RIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEIS 241
++L+HP +SF + S +L + + +G+ L E++ E+S
Sbjct: 177 ALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELS 236
Query: 242 GYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFL 295
GYISS ++ K Q++++N R V + +HKL++ L S C + + N L
Sbjct: 237 GYISS--EAHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSL 294
Query: 296 KGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 347
+ RS + Y++N++C YD+ +P KT + F++W+ +L I+ ++
Sbjct: 295 R-HRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 1139 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 1184
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 1185 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 1235
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1218 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1277
Query: 1236 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1284
+ + ++D G + + S S + N L+R + +T V
Sbjct: 1278 YHKNLEDLG-LEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR--- 1333
Query: 1285 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1344
+ LE LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1334 ---EQLELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQ 1388
Query: 1345 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1392
L FQCAHGRP+ +PL +++ L ++ + +L ++ W + E +++
Sbjct: 1389 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1442
>sp|A3QAD8|MUTL_SHELP DNA mismatch repair protein MutL OS=Shewanella loihica (strain ATCC
BAA-1088 / PV-4) GN=mutL PE=3 SV=1
Length = 631
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 182/358 (50%), Gaps = 43/358 (12%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ V++ELV NS+DAGAT+V + + +K+ D+GS
Sbjct: 2 TIRILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIDKGGSKLIKITDNGS 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GI ++ L L RHATSKL L D+D I +FGFRGEALASIS VS L + ++ +
Sbjct: 62 GIPKEELSLALSRHATSKLASLDDLD---AILSFGFRGEALASISSVSRLTLTSRTQEQS 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ +GS+ + + + VG+TV + DLF+N P RR++++S + H + + +
Sbjct: 119 EAWQAYAEGSE-MAVRVIPAAHPVGSTVEAADLFFNTPARRRFLKSDKTEFTH-IDEWLK 176
Query: 182 RIALVHPKVSF----------KFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEV 231
RIALV ++ F + ++E + L + S A ++ V
Sbjct: 177 RIALVRSEIHFTLKHNGKQVRNYRPAKTEAQYLQRLAQVSGKAFADNAL---------RV 227
Query: 232 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 291
+ N L +SGYI SP+ ++V QY Y+N R V +L+NH +A
Sbjct: 228 DCNHNGLSLSGYIQSPFSEMAVGDTQYFYVNGRLVRD----RLVNHAVR--------QAF 275
Query: 292 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
L+G+ Q +LNL PH + D+ P K V F + V FI +A+ SA
Sbjct: 276 AQQLQGE----QVAFVLMLNLD-PHQV-DVNVHPAKHEVRFHESRYVHDFILQALESA 327
>sp|A3CR14|MUTL_STRSV DNA mismatch repair protein MutL OS=Streptococcus sanguinis (strain
SK36) GN=mutL PE=3 SV=1
Length = 647
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 216/469 (46%), Gaps = 60/469 (12%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEA 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDE---RKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 118 GRHGTLLVAQGGE-----IEEHVPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 173 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 271 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIATSLKEQ- 329
Query: 355 AHDSFDVDMLEDAELPLESSRFQS----HQSSTHLHSSPLKNLAKQRDHMFHKEC--ERI 408
D++ DA L S + Q+S L + L KQ D + +++
Sbjct: 330 -------DLIPDALENLAKSTVKRASKPEQTSLPLKENRLYYDKKQNDFFLKPQVAEQQL 382
Query: 409 TFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
+F+E K E +E E P+ +S FAE P+ ++DH
Sbjct: 383 SFEESAKPVHEATDEKAE------PQSTSV----KFAERKPVSYDQLDH 421
Score = 33.9 bits (76), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 1160 KSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDA 1219
KS + + Q+ ++ G L +IDQHAA ER++ E R K+ + ++
Sbjct: 441 KSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVKYEYYREKIGDVD-------NS 493
Query: 1220 EQELVLPEI 1228
+Q+L++P I
Sbjct: 494 QQQLLVPYI 502
>sp|B8E280|MUTL_DICTD DNA mismatch repair protein MutL OS=Dictyoglomus turgidum (strain
Z-1310 / DSM 6724) GN=mutL PE=3 SV=1
Length = 572
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 182/351 (51%), Gaps = 29/351 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDD 59
MG + LPE +RN + +G V+ VV+ELV NS+DAGA ++ V ++ + V+DD
Sbjct: 1 MGKVILLPEEIRNKIAAGEVIERPVSVVKELVENSIDAGAKRITVEFINGGETLISVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++++ +L R ATSK + +D I T GFRGEALASI+ VS +E+ +K
Sbjct: 61 GEGMTKEDAILALNRFATSK---IKTEEDLYNIKTLGFRGEALASIASVSKVEVRSKTET 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ KV G + I+ + GT + DLFYN P RRK+++S + + +
Sbjct: 118 EDGVFIKVEGG---VIQEINLWQGSKGTVIKVFDLFYNVPARRKFLKSKTTET-NLIVDF 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLIS-SFGIEDFSFLDEVNANDGAL 238
V RIA+ +P++SF+ I + +++ + S + L ++S F IE + L + +G
Sbjct: 174 VKRIAMAYPEISFQLIQ-DGKNKFI--TSGNGKLEDVVSLLFDIEIHNNLIFLQRKEGNY 230
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G+IS P IS+K+ Y Y+N R+V I L A + +K N L+G
Sbjct: 231 IIEGFISKPGKLISLKSQDYFYVNRRWVRNNII------LQA---IKEGYK--NRLLEG- 278
Query: 299 RSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
P ++ L P+ D+ P K + F+ + V F+ +AI+ A
Sbjct: 279 -----YFPFSIVFLTLPYHEVDVNVHPTKREIKFEKEKEVYEFVSKAIKEA 324
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 40/199 (20%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL------DAE 1220
+++ Q+ +I V + +IDQHAA ERIR EEL+ ++ G ++V L +E
Sbjct: 386 RIVGQIFDNYIIVETKDRVYIIDQHAAHERIRYEELKKELSLGYLQNVEILFPLVIEVSE 445
Query: 1221 QELVLPEIGYQLLQNFAEQIKDWG----WICNIHTQGSRSFNKNL-NLLQRQITVITLLA 1275
+E L LL+ FA +D+G I + + + +K++ NL Q I+
Sbjct: 446 EEKELLNKHKDLLEKFAFSWEDFGPYHIRIIRVPYEFLKFDSKSIENLFQEIIS------ 499
Query: 1276 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1335
++S+ DL +L D +++ S AC AI G+ L+ E +
Sbjct: 500 -------DISEKDL----SKLED------------KIIKSMACHSAIRSGNILVREEMEV 536
Query: 1336 IVEELKQTSLCFQCAHGRP 1354
++ + + + C HGRP
Sbjct: 537 LINLIFERKIPLTCPHGRP 555
>sp|Q9CDL1|MUTL_LACLA DNA mismatch repair protein MutL OS=Lactococcus lactis subsp.
lactis (strain IL1403) GN=mutL PE=3 SV=2
Length = 656
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 174/352 (49%), Gaps = 30/352 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ ++ + L RHATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRHATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSTAE 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V KG L + K VGT + +LFYN P R KY++S ++ H +
Sbjct: 118 EESGTKLVAKGGNIETL--EPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSH-ITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP++SF ++ E L T + ++ + +GI + ++ +D E
Sbjct: 175 INRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
++GY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 233 LTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGYG 273
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
R P +L+++ +L D+ P K V ++A I +AI A
Sbjct: 274 NRLMVGRFPFAILSIKIDPTLADVNVHPTKQEVRLSKERELMALISKAIDEA 325
>sp|Q02VS5|MUTL_LACLS DNA mismatch repair protein MutL OS=Lactococcus lactis subsp.
cremoris (strain SK11) GN=mutL PE=3 SV=1
Length = 656
Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 227/493 (46%), Gaps = 56/493 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ V V ++V D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKITVSVEEAGLRLIEVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ ++ + L RHATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRHATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSNAQ 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + + KG L + K +GT + +LFYN P R KY++S ++ H +
Sbjct: 118 EEAGTKLIAKGGTIETL--EPLAKRLGTKISVANLFYNTPARLKYIKSLQAELSH-ITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP++SF ++ E L T + ++ + +GI + E+N +D E
Sbjct: 175 INRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMREINGSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
++GY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 233 LTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGYG 273
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
R P +L+++ L D+ P K V ++ I +AI A ++
Sbjct: 274 NRLMVGRFPFAVLSIKIDPKLADVNVHPTKQEVRLSKERELMTLISKAIDEA----LSEG 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+ LE+ + ++ S Q+ L ++PL ++D +E F+ + D
Sbjct: 330 VLIPEALENLQGRVKEKETVSVQTELPLQNNPLYYDNVRQDFFVREEA---IFEINKNDN 386
Query: 418 VE-LAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDHRVWTIESS-WFQDHQPSRH 475
+ L E+N+ +QP+ S V KI R T+ESS F D P
Sbjct: 387 SDSLTEQNSTDYTVNQPETGS-------------VSEKITDR--TVESSNEFTDRTPKNS 431
Query: 476 L--FSPPLENLKK 486
+ F +N++K
Sbjct: 432 VSNFGVDFDNIEK 444
>sp|Q5FLX4|MUTL_LACAC DNA mismatch repair protein MutL OS=Lactobacillus acidophilus
(strain ATCC 700396 / NCK56 / N2 / NCFM) GN=mutL PE=3
SV=1
Length = 631
Score = 146 bits (369), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 205/440 (46%), Gaps = 46/440 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKV---FVYVGVCNCYVKVV 57
M I+ L E + N + +G V+ VV+ELV NS+DAGAT++ FV G+ V+
Sbjct: 1 MPKIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQ-- 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G+GI+RD + L RHATSK+ + D+ + T GFRGEALASIS VS +EI+T
Sbjct: 59 DNGTGIARDQVDLAFTRHATSKISNEHDL---FKVATLGFRGEALASISAVSHVEILTAT 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
G G+K G +D GT + RDLF+N P R KY++ SP+ + +
Sbjct: 116 KGAIGVKATFSGGNKK---GQEDAAAREGTQITVRDLFFNTPARLKYLR-SPRTEIMKIV 171
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R+AL +P VSF + + LL T + + + + +G ++E A D
Sbjct: 172 DIINRLALGYPSVSFTLSN--TGKVLLRTPGNGNLKQTVANVYGRHIAEKMEEFEAKDND 229
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+ISG +S P + S + F + +N RY+ +++ N + G
Sbjct: 230 FKISGLMSKPELTRSTRNFVSILLNGRYIR-------------------NFQLNTAIMDG 270
Query: 298 KRSKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIA 355
+K A P +L ++ L D+ P K V + + I I + ++KK
Sbjct: 271 YGAKLAARHYPIIVLAIQVDPLLVDVNVHPTKQEVRLSKEKELSRLITSTISNVFIKKTE 330
Query: 356 HDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQK 415
S ++ E ++ +F +Q+ N A+++ H+ E+ EF
Sbjct: 331 QTSAFANLENKRETLVDQLQFNLNQNVV--------NTARKKTPEIHENNEK---PEFLA 379
Query: 416 DPVELAEENTEMEFFSQPKH 435
P + EE T+ + P+
Sbjct: 380 KPKKPEEEKTDYVDLNIPRE 399
>sp|B8J9F5|MUTL_ANAD2 DNA mismatch repair protein MutL OS=Anaeromyxobacter dehalogenans
(strain 2CP-1 / ATCC BAA-258) GN=mutL PE=3 SV=1
Length = 607
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 173/361 (47%), Gaps = 37/361 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I+ LP + N + +G V+ +V+ELV N++DAGAT V V V V+V DD
Sbjct: 1 MPRIHVLPPGLVNQIAAGEVVERPASIVKELVENALDAGATSVGVDVEEGGLALVRVADD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSG+ RD +L ERHATSK L D + IGT GFRGEA+ +I+ VS + T A
Sbjct: 61 GSGMDRDDALLALERHATSK---LRDAEGLAAIGTMGFRGEAVPAIASVSRFRLDTSAGE 117
Query: 120 RPNGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R ++G LG + + GTTV RDLF+N P RRK+M+++ + H V +
Sbjct: 118 DGAGTRVEIEGG---VLGEVAPVARPRGTTVEVRDLFFNTPARRKFMRAASTEAGH-VSE 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDGA 237
V+R+AL P V F + S L+ + LA + G E L V+A G
Sbjct: 174 AVIRLALARPDVGFT---LRSAGRLVLGARAGGGLADRAGQALGREAHRHLLPVDARRGE 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVC-KGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ + G I SP S + Y+++N RYV + H +L A +
Sbjct: 231 VRVHGLICSPDHSEATGRALYLFVNGRYVRDRAAAHAVLRAFAGTLPPGRH--------- 281
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-WM 351
PA +L + P D+ P K V F + ++ + + A+R+A W+
Sbjct: 282 ---------PAGVLFVELPLHRVDVNVHPQKLEVRFAEGREVFDALFHTVAGALRTAPWL 332
Query: 352 K 352
+
Sbjct: 333 R 333
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 1182 GGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIK 1241
GGTL VIDQHA+ ER+ LR + +L Q + LP + L+ ++
Sbjct: 435 GGTLVVIDQHASHERMLFHRLREAFRARRIPVQPFL-LPQVVTLPPAAARALEAGLAELG 493
Query: 1242 DWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG 1301
G+ + G +F A + GV+L+ + L + QLA+ +
Sbjct: 494 RLGF--DAEPFGGEAFAVKG-------------APAALAGVDLTAL-LTDLGSQLAEVER 537
Query: 1302 SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVN 1361
S + +L + AC A+ + P E +++ L +C HGRP L +
Sbjct: 538 GSAVDDAFHDLLATMACHAAVRANQDVSPEEARALLDGLDAIDFKARCPHGRPVVFEL-S 596
Query: 1362 LEALHKQIAQ 1371
L L +++ +
Sbjct: 597 LADLERRVGR 606
>sp|A2RP08|MUTL_LACLM DNA mismatch repair protein MutL OS=Lactococcus lactis subsp.
cremoris (strain MG1363) GN=mutL PE=3 SV=1
Length = 656
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 227/493 (46%), Gaps = 56/493 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I L EA+ N + +G V+ VV+ELV NS+DAG++K+ + V ++V+D+
Sbjct: 1 MGKIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ ++ + L RHATSK+ AD+ I T GFRGEAL SI+ VS + I T
Sbjct: 61 GLGLEKEDVALALRRHATSKIKDSADL---FRIRTLGFRGEALPSIASVSQMTIETSNAQ 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + + KG L + K +GT + +LFYN P R KY++S ++ H +
Sbjct: 118 EEAGTKLIAKGGTIETL--EPLAKRLGTKISVANLFYNTPARLKYIKSLQAELSH-ITDI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R++L HP++SF ++ E L T + ++ + +GI + E+N +D E
Sbjct: 175 INRLSLAHPEISFTLVN--EGKEFLKTAGNGDLRQVIAAIYGIGTAKKMREINGSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK--G 297
++GY+S P + + + + + IN R++ ++ N L+ G
Sbjct: 233 LTGYVSLPELTRANRNYITILINGRFI-------------------KNFLLNRAILEGYG 273
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
R P +L+++ L D+ P K V ++ I +AI + ++
Sbjct: 274 NRLMVGRFPFAVLSIKIDPKLADVNVHPTKQEVRLSKERELMTLISKAID----ETLSEG 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDP 417
+ LE+ + + S Q+ L ++PL ++D +E F+ + D
Sbjct: 330 VLIPEALENLQGRAKEKGTVSVQTELPLQNNPLYYDNVRQDFFVREEA---IFEINKNDN 386
Query: 418 VE-LAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDHRVWTIESS-WFQDHQPSRH 475
+ L E+N+ +QP+ S V KI R T+ESS F D P
Sbjct: 387 SDSLTEQNSTDYTVNQPETGS-------------VSEKITDR--TVESSNEFTDRTPKNS 431
Query: 476 L--FSPPLENLKK 486
+ F +N++K
Sbjct: 432 VSNFGVDFDNIEK 444
>sp|Q01QW7|MUTL_SOLUE DNA mismatch repair protein MutL OS=Solibacter usitatus (strain
Ellin6076) GN=mutL PE=3 SV=1
Length = 660
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 176/389 (45%), Gaps = 55/389 (14%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I LP+ V N + +G V+ VV+EL+ NS+DAGAT+V V V +++VDD
Sbjct: 1 MGRIRILPDQVANKIAAGEVVERPASVVKELLENSLDAGATEVRVEVEAGGRRLIRIVDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ RD +L ERHATSKL D+ D I T GFRGEAL SI+ VS L + T++
Sbjct: 61 GFGMLRDDALLAFERHATSKL---RDVKDLLSIATLGFRGEALPSIASVSRLLLETRSME 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G R + G K L ++ GT + RDLFYN P RRK++++ P ++ H +
Sbjct: 118 EPTGTRIEIAGGKMLR--CEEAALGGGTVITVRDLFYNVPARRKFLRTEPTELAH-IASL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL- 238
V +L HP SF+ ELL +S + FG + L E+ + L
Sbjct: 175 VTHYSLAHPDKSFRL--STGPTELLGVTPVASMKERVYQVFGSQILDELVEIGVRERDLF 232
Query: 239 ----------------------------EISGYISSPYDSISVKAFQYVYINSRYVCKGP 270
++G+ S P S + Y+++N R +
Sbjct: 233 LPPPSVPPSQAIAEYRSTEPEDPPFRRFRLTGFFSRPQIQKSNRNSIYIFVNGRLIRD-- 290
Query: 271 IHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHV 330
+L+ H +S A + + + A P LL L C D+ P KT V
Sbjct: 291 --RLVLHALSS--------AYHNLM-----PASAYPFALLFLECDAEEVDVNVHPSKTEV 335
Query: 331 VFKDWEPVLAFIERAIRSAWMKKIAHDSF 359
F+ + FI +IR M+ +F
Sbjct: 336 RFRHGSFLHDFIRDSIRERLMESRPAPTF 364
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 1146 LHLTGEF---FIP-DSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE 1201
L + GEF IP ++ S L D + L Q+ + FI L +IDQH A ERI E+
Sbjct: 448 LDMHGEFPLEAIPAPEMSLSALSDLRPLGQIHESFIIAAGRDGLWIIDQHVAHERILFEQ 507
Query: 1202 LRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICN-IHTQG--SRSFN 1258
+ + +G ++ Q L++P I LQ AEQ D+ I + +H G + F
Sbjct: 508 VLKQRAAGRVET-------QRLLMPMI----LQLSAEQQIDYARIADELHASGFETEPFG 556
Query: 1259 KNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR-VLNSKA 1317
I + A P G + L E L ++A+ + + + + R + S A
Sbjct: 557 NR---------TIAVKAAPAAVGPQDLERILFEIL-EIAENEMRTNSLDDLRRNICASIA 606
Query: 1318 CRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1357
CR AI L ++ ++ L T C HGRP +
Sbjct: 607 CRAAIKINMRLDLAKMEWLLRALAATDCPMSCPHGRPIAM 646
>sp|A7HNR3|MUTL_FERNB DNA mismatch repair protein MutL OS=Fervidobacterium nodosum
(strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=mutL PE=3
SV=1
Length = 588
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 185/358 (51%), Gaps = 40/358 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I +LP+ V + + +G V+ + VV+ELV NS+DA AT + V + Y+KV D+
Sbjct: 1 MSVIKKLPQEVVSKIAAGEVVINPASVVKELVENSLDANATSIEVQIRNGGKSYIKVSDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+SRD +++ +R TSK+ L +D I ++GFRGEAL+SI++VS L IIT + G
Sbjct: 61 GIGMSRDDMLIAIDRFTTSKISAL---EDIYNIHSYGFRGEALSSIAEVSRL-IITSSDG 116
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
N +R + G K + I + ++ GTTV DLF+N P RRK++ SS K V +
Sbjct: 117 N-NAHRLEVIGGKI--IKITETHRERGTTVEVYDLFFNIPARRKFL-SSEKVETRMVTEI 172
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGI-----EDFSFLDEVNAN 234
V + LV P VSF F + EDE++ S S L F I ++FS ++ + +
Sbjct: 173 VEKFMLVQPSVSFVF---KIEDEIVYNASKGS----LEDRFSIIFPEVKEFSLIEPLQSE 225
Query: 235 DGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGF 294
++ISG ISSP + ++ Q ++N R+V I LLN SF+ G+
Sbjct: 226 --IMQISGIISSPQYTRRNRSGQIFFVNKRFV----IDNLLN---LSFE--------RGY 268
Query: 295 LKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
G+ P ++ L D+ P K V F D + V I R IR+ K
Sbjct: 269 --GEALAQGEHPYGVIFLDFLPDKIDVNIHPQKLQVKFSDPQNVYNEIARTIRTTLRK 324
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 1185 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 1244
L +ID HAA ERI E+L+ + ++V L + L + QL Q ++ K +G
Sbjct: 423 LVIIDFHAAHERIIYEQLKE----NKFETVQLL-IPLHIKLGKSFLQLSQQLTDEFKKYG 477
Query: 1245 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV-NLSDVDLLEFLQQLADTDGSS 1303
+ I T L+ + + +P I V + S+V FL+ L +
Sbjct: 478 FDFEIKT------------LEDGSGEVVIKQIPSILKVTDASNV----FLEVLEEYRIPF 521
Query: 1304 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1359
P + VL SKAC+ A+ GD L E I++E+K +L C HGRP + L
Sbjct: 522 EKPKGLTYVLASKACKSAVKTGDKLSHDEVQQIIKEIKSKNLL-TCPHGRPIMMKL 576
>sp|Q11Z58|MUTL_CYTH3 DNA mismatch repair protein MutL OS=Cytophaga hutchinsonii (strain
ATCC 33406 / NCIMB 9469) GN=mutL PE=3 SV=1
Length = 610
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 181/362 (50%), Gaps = 31/362 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDDGSG 62
I LP+ + N + +G V+ VV+EL+ NSVDAG+T + + V ++V+D+G G
Sbjct: 5 IRLLPDNIANQIAAGEVVQRPASVVKELLENSVDAGSTNIQLIVKDAGKQLIQVIDNGKG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+S L ERHATSK+ DD I TFGFRGEA+ASI+ V+ +E+ TK G
Sbjct: 65 MSDGDARLCFERHATSKI---RSADDLFAIRTFGFRGEAMASIASVAQVEMKTKLPGNEL 121
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
G ++GS L + GT++ ++LFYN P RR +++S+ ++ H + + V R
Sbjct: 122 GTLIRIEGSAILVH--EQTAHPQGTSISVKNLFYNVPARRNFLKSNSVEMRHIMDEFV-R 178
Query: 183 IALVHPKVSFKFI--DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
+AL HP+V+F F D+E + T S + ++LL S+ + +E + + I
Sbjct: 179 VALAHPEVAFSFYHNDLELFNVPEETLSKRA-VSLLGGSYREQLIPCKEETD----FVSI 233
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
SGYI P + + QY ++N+RY+ +H + H +D++
Sbjct: 234 SGYIGKPESARKTRGDQYFFVNNRYIRSNYLHHAVMHAFEELIPTDAF------------ 281
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFD 360
P YLL + + D+ P KT + F D + V A I+ ++ + S D
Sbjct: 282 -----PFYLLFIEIDPAHIDVNVHPTKTEIKFDDEKTVYAIIKACVKRSLGTHNIMPSLD 336
Query: 361 VD 362
D
Sbjct: 337 FD 338
>sp|B4UCW3|MUTL_ANASK DNA mismatch repair protein MutL OS=Anaeromyxobacter sp. (strain K)
GN=mutL PE=3 SV=1
Length = 607
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 173/361 (47%), Gaps = 37/361 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I+ LP + N + +G V+ +V+ELV N++DAGAT V V V V+V DD
Sbjct: 1 MPRIHVLPPGLVNQIAAGEVVERPASIVKELVENALDAGATSVGVDVEEGGLALVRVADD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSG+ RD +L ERHATSK L D + IGT GFRGEA+ +I+ VS + T A
Sbjct: 61 GSGMDRDDALLALERHATSK---LRDAEGLAAIGTMGFRGEAVPAIASVSRFRLDTSAGE 117
Query: 120 RPNGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R ++G LG + + GTTV RDLF+N P RRK+M+++ + H V +
Sbjct: 118 DGAGTRVEIEGG---VLGEVAPVARPRGTTVEVRDLFFNTPARRKFMRAASTEAGH-VSE 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDGA 237
V+R+AL P V F + S L+ + LA + G E L V+A G
Sbjct: 174 AVIRLALARPDVGFT---LRSGGRLVLGARAGGGLADRAGQALGREAHRHLLPVDARRGE 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVC-KGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ + G I SP S + Y+++N RYV + H +L A +
Sbjct: 231 VRVHGLICSPDHSEATGRALYLFVNGRYVRDRAAAHAVLRAFAGTLPPGRH--------- 281
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-WM 351
PA +L + P D+ P K V F + ++ + + A+R+A W+
Sbjct: 282 ---------PAGVLFVELPLHRVDVNVHPQKLEVRFAEGREVFDALFHTVAGALRTAPWL 332
Query: 352 K 352
+
Sbjct: 333 R 333
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 1182 GGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIK 1241
GGTL VIDQHA+ ER+ LR + +L Q + LP + L+ ++
Sbjct: 435 GGTLVVIDQHASHERMLFHRLREAFRARRIPVQPFL-LPQVVTLPPAAARALEAGLAELG 493
Query: 1242 DWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG 1301
G+ + G +F A + GV+L+ + L + QLA+ +
Sbjct: 494 RLGF--DAEPFGGEAFAVKG-------------APAALAGVDLTAL-LTDLGSQLAEVER 537
Query: 1302 SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVN 1361
S + +L + AC A+ + P E +++ L +C HGRP L +
Sbjct: 538 GSAVDDAFHDLLATMACHAAVRANQDVSPEEARALLDGLDAIDFKARCPHGRPVVFEL-S 596
Query: 1362 LEALHKQIAQ 1371
L L +++ +
Sbjct: 597 LADLERRVGR 606
>sp|A7GR98|MUTL_BACCN DNA mismatch repair protein MutL OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=mutL PE=3 SV=1
Length = 649
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 174/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L E + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDEQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE++T
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELVTSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGEIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K + +LL T + +L + + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNTKKLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IRGYVTLPEVTRASRNYMSTIVNGRYVRNYVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L FIE+ ++ A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLQFIEQTLQDAFKK 327
>sp|B5YE42|MUTL_DICT6 DNA mismatch repair protein MutL OS=Dictyoglomus thermophilum
(strain ATCC 35947 / DSM 3960 / H-6-12) GN=mutL PE=3
SV=1
Length = 575
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 171/357 (47%), Gaps = 41/357 (11%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFV-YVGVCNCYVKVVDD 59
MG + LPE +RN + +G V+ VV+ELV NS+DAGAT++ V + + V+DD
Sbjct: 1 MGKVVLLPEELRNKIAAGEVVERPVSVVKELVENSIDAGATRIIVEFANGGETLISVIDD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G++R+ +L R ATSK + +D I T GFRGEALASI+ VS +E+ +K
Sbjct: 61 GEGMTREDAILALNRFATSK---IKTEEDLYNIKTLGFRGEALASIASVSKMELRSKTEL 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+ KV G + ++ + GT + DLFYN P R+K+++S + + +
Sbjct: 118 EDGVFIKVEGG---VIKEVNLWQGSKGTVIKVSDLFYNVPARKKFLKSKATET-NLIIDF 173
Query: 180 VLRIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGAL 238
V RIA+ +P++SF+ I D +S+ T L+ F I L +G
Sbjct: 174 VKRIAIAYPQISFQLIQDGKSK---FITPGDGDLENLISLLFDIRVQESLISFQKREGDY 230
Query: 239 EISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGK 298
I G++S P I++K+ Y Y+N R W NN L+
Sbjct: 231 CIEGFVSKPGKLIALKSQDYFYVNRR-----------------------WVRNNTILQAI 267
Query: 299 RSKSQA------CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 349
R + P ++ L P+S D+ P K V F+ + V F+ R+IR A
Sbjct: 268 REGYKGRILDGYFPFSIIFLTVPYSEVDVNVHPTKREVKFQKEKEVYEFVFRSIREA 324
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 30/194 (15%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL------DAE 1220
+++ Q+ +I + + +IDQHAA ERI+ EEL+ ++ G ++V L +E
Sbjct: 389 RIVGQIFDNYIILETKDKVYIIDQHAAHERIKYEELKEELNLGYIQNVEILFPVVIEVSE 448
Query: 1221 QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF 1280
+E +L + LL+ FA +D+G H + + + LN + ++ +F
Sbjct: 449 EEKILLDKYKDLLERFAFSWEDFG---PYHIRIVKVPYEFLNFDSK--------SIENLF 497
Query: 1281 GVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEEL 1340
+SD+ + L +L D +++ S AC A+ G+ L+ E ++++ +
Sbjct: 498 REIISDISEKD-LSKLED------------KIIKSMACHSAVRSGNILIREEMEMLIKLI 544
Query: 1341 KQTSLCFQCAHGRP 1354
+ ++ C HGRP
Sbjct: 545 FEKNIPLTCPHGRP 558
>sp|C1F876|MUTL_ACIC5 DNA mismatch repair protein MutL OS=Acidobacterium capsulatum
(strain ATCC 51196 / DSM 11244 / JCM 7670) GN=mutL PE=3
SV=1
Length = 665
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 171/379 (45%), Gaps = 54/379 (14%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
MG I L + V N + +G V+ VV+EL+ N++DA AT++ V V ++V D+
Sbjct: 1 MGRIRVLSDQVANQIAAGEVVDRPASVVKELLENAIDAEATRIRVEVEAGGRKLIRVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G G+ RD +L ERHATSK+ DD I T GFRGEAL SI+ +S LE+IT+A G
Sbjct: 61 GIGMMRDDAMLAFERHATSKI---RSSDDLLTIATLGFRGEALPSIASISRLEMITRAQG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G + G K L ++D GT+ RDLFYN P RRK++++ ++ H V
Sbjct: 118 EETGTCIEIAGGKMLR--VEDAGAPPGTSFTIRDLFYNTPARRKFLKAESTELSH-VSAL 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNA------ 233
V AL HP F+ + LL + P + FG E + L + A
Sbjct: 175 VTHYALAHPDKHFEL--HSATHALLNAPPVNEPSERVFQIFGAETLNQLIPMAAERPFDR 232
Query: 234 ------------------NDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLL 275
+ G L + G+IS P + Y++IN R V +L+
Sbjct: 233 AGLPEPPPWRRDQDYEPPDPGFLRVKGFISKPALQKLNRNSIYIFINRRLVRD----RLI 288
Query: 276 NHLAASFDCSDSWKANNGFLKGKRS--KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFK 333
H +G R+ + P LL L P D+ P KT V F+
Sbjct: 289 LH---------------AITEGYRNIIPPTSFPVALLFLEMPPHEVDVNVHPAKTEVRFR 333
Query: 334 DWEPVLAFIERAIRSAWMK 352
+ F+ +IR+A MK
Sbjct: 334 QSSVLHDFLRDSIRNALMK 352
Score = 37.7 bits (86), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 1161 SCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-LRHKVLSGEGKSVAYLDA 1219
+ L K L Q+ + FI V +IDQH A ER+ E+ LR + E + V
Sbjct: 472 ASLASLKPLGQLRESFILAVNDEGFWIIDQHVAHERVLFEKILRER----EVERVHRQRL 527
Query: 1220 EQELVLPEIGYQLLQ--NFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1277
L+L + +Q+++ A++++ G+ + F + I + A P
Sbjct: 528 LMPLLLDLLPHQMVRFAEIAQELERNGF-------EAEPFGPH---------TIAIKASP 571
Query: 1278 C-IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALI 1336
+ G L + L+E L+Q S R+ S AC AI L P +
Sbjct: 572 VGLEGARLERM-LVEVLEQTGTGTQSENLETVRTRIAASIACHSAIKINTPLDPQRMEWL 630
Query: 1337 VEELKQTSLCFQCAHGRPTTV 1357
+ EL +T+ C HGRP +
Sbjct: 631 LAELARTAHPTSCPHGRPIAL 651
>sp|A8AZU1|MUTL_STRGC DNA mismatch repair protein MutL OS=Streptococcus gordonii (strain
Challis / ATCC 35105 / CH1 / DL1 / V288) GN=mutL PE=3
SV=1
Length = 647
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 216/470 (45%), Gaps = 62/470 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
M I LPE + N + +G V+ + VV+ELV NS+DAGA+++ + + ++V D+
Sbjct: 1 MSKIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKTIQVTDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI + + L RHATSK+ AD+ I T GFRGEA+ SI+ VS I T
Sbjct: 61 GEGIDHEDVPLALRRHATSKIKKQADL---FRIRTLGFRGEAIPSIASVSRFTIETATEN 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKD---VGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSV 176
+G V +G + I++ VGT + DLF+N P R KYM+S ++ H V
Sbjct: 118 GQHGTLLVAQGGE-----IEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIV 172
Query: 177 KKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDG 236
+ R++L HP+V+F I E+ T S + + +G+ + E++A+D
Sbjct: 173 -DVINRLSLAHPEVAFTLIS--DGREMTRTAGSGNLRQAIAGIYGLATAKKMVEISASDL 229
Query: 237 ALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLK 296
E+SGY+S P + + + + + IN RY+ ++ N L
Sbjct: 230 DFEVSGYVSLPELTRANRNYITILINGRYI-------------------KNFLLNRAILD 270
Query: 297 GKRSKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKI 354
G SK P ++N++ L D+ P K V ++A I +AI ++ ++
Sbjct: 271 GYGSKLMVGRFPLAVINIQIDPYLADVNVHPTKQEVRISKERELMALISQAIAASLKEQ- 329
Query: 355 AHDSFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKN----LAKQRDHMFHKEC---ER 407
D++ DA L S + + S PLK K+R+ F K ++
Sbjct: 330 -------DLIPDALENLAKSTVK-RATKPEQTSLPLKENRLYYDKERNDFFLKPQVAEQQ 381
Query: 408 ITFQEFQKDPVELAEENTEMEFFSQPKHSSSLLDGSFAECLPIVPPKIDH 457
I+F+E + E +E E P+ +S FAE P ++DH
Sbjct: 382 ISFEESAEPIHEATDEKAE------PQPTSV----KFAERKPASYDQLDH 421
Score = 33.9 bits (76), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 1160 KSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDA 1219
KS + + Q+ ++ G L +IDQHAA ER++ E R K+ + ++
Sbjct: 441 KSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVKYEYYREKIGDVD-------NS 493
Query: 1220 EQELVLPEI 1228
+Q+L++P I
Sbjct: 494 QQQLLVPYI 502
>sp|B7ITM0|MUTL_BACC2 DNA mismatch repair protein MutL OS=Bacillus cereus (strain G9842)
GN=mutL PE=3 SV=1
Length = 647
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 174/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I+GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 ITGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>sp|B7JJ46|MUTL_BACC0 DNA mismatch repair protein MutL OS=Bacillus cereus (strain AH820)
GN=mutL PE=3 SV=1
Length = 647
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IQGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>sp|B5E6C5|MUTL_STRP4 DNA mismatch repair protein MutL OS=Streptococcus pneumoniae
serotype 19F (strain G54) GN=mutL PE=3 SV=1
Length = 649
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 169/349 (48%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
SK P ++++ L D+ P K V + ++A + AI
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAI 322
>sp|Q636Q8|MUTL_BACCZ DNA mismatch repair protein MutL OS=Bacillus cereus (strain ZK /
E33L) GN=mutL PE=3 SV=1
Length = 647
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>sp|B7HLA2|MUTL_BACC7 DNA mismatch repair protein MutL OS=Bacillus cereus (strain AH187)
GN=mutL PE=3 SV=1
Length = 647
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>sp|Q6HF47|MUTL_BACHK DNA mismatch repair protein MutL OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=mutL PE=3 SV=1
Length = 647
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQTAFKK 327
>sp|C1CBX8|MUTL_STRZJ DNA mismatch repair protein MutL OS=Streptococcus pneumoniae
(strain JJA) GN=mutL PE=3 SV=1
Length = 649
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 207/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + +++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQA--CPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++A + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMALVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>sp|Q81A26|MUTL_BACCR DNA mismatch repair protein MutL OS=Bacillus cereus (strain ATCC
14579 / DSM 31) GN=mutL PE=3 SV=1
Length = 647
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>sp|B7HDP3|MUTL_BACC4 DNA mismatch repair protein MutL OS=Bacillus cereus (strain B4264)
GN=mutL PE=3 SV=1
Length = 647
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>sp|A0RHE0|MUTL_BACAH DNA mismatch repair protein MutL OS=Bacillus thuringiensis (strain
Al Hakam) GN=mutL PE=3 SV=1
Length = 647
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>sp|Q03MY0|MUTL_STRTD DNA mismatch repair protein MutL OS=Streptococcus thermophilus
(strain ATCC BAA-491 / LMD-9) GN=mutL PE=3 SV=1
Length = 647
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 199/402 (49%), Gaps = 55/402 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V G+ +++
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSK--IQIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 59 DNGEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAA 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKV 172
G G + V KG + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 116 DGEVYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAEL 168
Query: 173 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEV 231
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E+
Sbjct: 169 AHIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEI 224
Query: 232 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 291
+ +D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 225 SNSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD-------- 270
Query: 292 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
G+ G + P +++++ L D+ P K V + ++A I+ AI +
Sbjct: 271 -GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALIKSAIAQSLR 327
Query: 352 KKIAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 391
++ D++ DA L S+R + T L PLK
Sbjct: 328 EQ--------DLIPDALENLAKSSTRGATRSVQTSL---PLK 358
>sp|B9IV58|MUTL_BACCQ DNA mismatch repair protein MutL OS=Bacillus cereus (strain Q1)
GN=mutL PE=3 SV=1
Length = 647
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>sp|B8CX97|MUTL_HALOH DNA mismatch repair protein MutL OS=Halothermothrix orenii (strain
H 168 / OCM 544 / DSM 9562) GN=mutL PE=3 SV=1
Length = 644
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 176/349 (50%), Gaps = 30/349 (8%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV-GVCNCYVKVVDD 59
M I RLPE+V N + +G V+ VV+ELV NS+DAG+ K+ + + ++V D+
Sbjct: 1 MPEIKRLPESVANQISAGEVVERPASVVKELVENSLDAGSNKILIEIENGGKDLIRVKDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI D + + +R+ATSK+ D++D + + GFRGEALASI+ VS+L+II++
Sbjct: 61 GHGIPSDEIEIAFDRYATSKI---TDINDLYSLKSLGFRGEALASIASVSILDIISRTKS 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDE--RKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVK 177
+ + +KG K I E VGT ++ +DLF+N P R KY++++ + H +
Sbjct: 118 QTKAIKMRLKGGKV----ISKEPCGASVGTDIIVKDLFFNTPARYKYLKTTRNEFKH-IS 172
Query: 178 KCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGA 237
+ R AL +P V+F I + +L T + L + + +G E L +++ D
Sbjct: 173 NIITREALAYPGVNFTLI--HNGRIVLKTPGTGKTLDCIYAIYGKEMAQSLVKIDYEDRY 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKG 297
+++SGYIS P ++++ ++N R V + +LN +A G L
Sbjct: 231 IKVSGYISRPDYYRYNRSYEIFFVNKRAVH----NSILNR--------GVEEAYQGLL-- 276
Query: 298 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 346
A P LNL+ L D+ P K V F + + I+ I
Sbjct: 277 ---PPGAYPVVFLNLKLNPILVDVNVHPTKKEVKFSRDKVIKEVIQNGI 322
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 111/268 (41%), Gaps = 31/268 (11%)
Query: 1095 LCPHAHLGAQAEGTSIISGTKWR--NGHPQTT--NNNISCDIHNQDNILDISSGLLHLTG 1150
L P G ++ S +S K+ N + T N+N D H + + ++I
Sbjct: 389 LLPSKKNGFYSKKNSQVSQNKFMDINNKLEKTEINDNYKKDKHYKTDSINIKDN------ 442
Query: 1151 EFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGE 1210
I ++ NK + +VL Q+ +I L +IDQH A ERI + K + E
Sbjct: 443 --SIKENKNKMDIPIKRVLGQIKNTYIIAEGRDGLYIIDQHNAHERILYQSFIEKYNNSE 500
Query: 1211 GKSVA-YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQIT 1269
S + E PE ++L+++ Q++ G+ + G SF
Sbjct: 501 IVSQPLVVPVNIETTAPEA--EVLKSYLPQLEKMGFKLEVF--GINSF------------ 544
Query: 1270 VITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLL 1329
+ VP + + + E + +L + D + + +++ +CRGAI G+ L
Sbjct: 545 --IVREVPSLIKKRSNKRVVREVIDKLLEHDKAMKPSELINEIISYMSCRGAIKAGEYLD 602
Query: 1330 PSECALIVEELKQTSLCFQCAHGRPTTV 1357
E I+E L +T ++C HGRP +
Sbjct: 603 KKEAEQIIEGLFKTDNPYRCPHGRPIII 630
>sp|Q732V8|MUTL_BACC1 DNA mismatch repair protein MutL OS=Bacillus cereus (strain ATCC
10987) GN=mutL PE=3 SV=1
Length = 647
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>sp|C1ENZ2|MUTL_BACC3 DNA mismatch repair protein MutL OS=Bacillus cereus (strain
03BB102) GN=mutL PE=3 SV=1
Length = 647
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>sp|Q5M6H7|MUTL_STRT2 DNA mismatch repair protein MutL OS=Streptococcus thermophilus
(strain ATCC BAA-250 / LMG 18311) GN=mutL PE=3 SV=1
Length = 647
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 199/402 (49%), Gaps = 55/402 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V G+ +++
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSK--IQIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 59 DNGEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAA 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKV 172
G G + V KG + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 116 DGEVYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAEL 168
Query: 173 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEV 231
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E+
Sbjct: 169 AHIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEI 224
Query: 232 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 291
+ +D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 225 SNSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD-------- 270
Query: 292 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
G+ G + P +++++ L D+ P K V + ++A I+ AI +
Sbjct: 271 -GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALIKSAIAQSLR 327
Query: 352 KKIAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 391
++ D++ DA L S+R + T L PLK
Sbjct: 328 EQ--------DLIPDALENLAKSSTRGATRSVQTSL---PLK 358
>sp|Q5M1Y6|MUTL_STRT1 DNA mismatch repair protein MutL OS=Streptococcus thermophilus
(strain CNRZ 1066) GN=mutL PE=3 SV=1
Length = 647
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 199/402 (49%), Gaps = 55/402 (13%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYV---GVCNCYVKVV 57
M I LPE + N + +G V+ VV+ELV N++DAG+T++ + V G+ +++
Sbjct: 1 MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSK--IQIT 58
Query: 58 DDGSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKA 117
D+G G+++ + + RHATSK+ + D+ I T GFRGEAL SI+ +S L I+T A
Sbjct: 59 DNGEGMAQADVAMSLRRHATSKIKNQGDL---FRIRTLGFRGEALPSIASISHLTIVTAA 115
Query: 118 HGRPNGYRKVMKGSKCLYLGIDDERKD-----VGTTVVSRDLFYNQPVRRKYMQSSPKKV 172
G G + V KG + E +D VGT + +LFYN P R KYM+S ++
Sbjct: 116 DGEVYGTKLVAKGGEI-------ESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAEL 168
Query: 173 LHSVKKCVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISS-FGIEDFSFLDEV 231
H V V R++L HP+V+F ++ + L S + L I+ +G+ + E+
Sbjct: 169 AHIV-DVVNRLSLAHPEVAFTLLN---DGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEI 224
Query: 232 NANDGALEISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKAN 291
+ +D E+SGY+S P + + + + + IN RY+ + LLN A FD
Sbjct: 225 SNSDLDFEVSGYVSLPELTRANRNYITILINGRYIK----NFLLNR--AIFD-------- 270
Query: 292 NGFLKGKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWM 351
G+ G + P +++++ L D+ P K V + ++A I+ AI +
Sbjct: 271 -GY--GSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKEKELMALIKSAIAQSLR 327
Query: 352 KKIAHDSFDVDMLEDA--ELPLESSRFQSHQSSTHLHSSPLK 391
++ D++ DA L S+R + T L PLK
Sbjct: 328 EQ--------DLIPDALENLAKSSTRGATRSVQTSL---PLK 358
>sp|Q81WR4|MUTL_BACAN DNA mismatch repair protein MutL OS=Bacillus anthracis GN=mutL PE=3
SV=1
Length = 626
Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>sp|C3L823|MUTL_BACAC DNA mismatch repair protein MutL OS=Bacillus anthracis (strain CDC
684 / NRRL 3495) GN=mutL PE=3 SV=1
Length = 626
Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>sp|C3P5H4|MUTL_BACAA DNA mismatch repair protein MutL OS=Bacillus anthracis (strain
A0248) GN=mutL PE=3 SV=1
Length = 626
Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 173/353 (49%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G ++KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLIIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPVGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE +++A+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKK 327
>sp|A9VS12|MUTL_BACWK DNA mismatch repair protein MutL OS=Bacillus weihenstephanensis
(strain KBAB4) GN=mutL PE=3 SV=1
Length = 644
Score = 143 bits (361), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 172/353 (48%), Gaps = 27/353 (7%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDD 59
MG I +L + + N + +G V+ VV+ELV NS+DA +T + +++ ++++D+
Sbjct: 1 MGKIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ + ++ ERHATSK + D +D I T GFRGEAL SI+ VS LE+IT
Sbjct: 61 GDGIAEEDCIVAFERHATSK---IKDENDLFRIRTLGFRGEALPSIASVSELELITSTGD 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
P G +KG + RK GT + ++LF+N P R KYM++ + L ++
Sbjct: 118 AP-GTHLSIKGGDIIKQEKTASRK--GTDITVQNLFFNTPARLKYMKTIHTE-LGNITDI 173
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V RIA+ HP+VS K +E +LL T + +L S + I+ L + A
Sbjct: 174 VYRIAMSHPEVSLKL--FHNEKKLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFT 231
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I GY++ P + + + + +N RYV + K + + + L R
Sbjct: 232 IKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQ------------QGYHTLLPIGR 279
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 352
P L++ L D+ P K V F + +L IE ++SA+ K
Sbjct: 280 -----YPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQSAFKK 327
>sp|Q2IIL0|MUTL_ANADE DNA mismatch repair protein MutL OS=Anaeromyxobacter dehalogenans
(strain 2CP-C) GN=mutL PE=3 SV=1
Length = 608
Score = 143 bits (361), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 172/361 (47%), Gaps = 37/361 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCN-CYVKVVDD 59
M I+ LP + N + +G V+ +V+ELV N++DAGAT + V V V+V DD
Sbjct: 1 MPRIHVLPPGLVNQIAAGEVVERPASIVKELVENALDAGATAIGVDVEEGGLALVRVADD 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
GSG+ RD +L ERHATSK L D + IGT GFRGEA+ +I+ VS + T
Sbjct: 61 GSGMDRDDALLALERHATSK---LRDAEGLAAIGTMGFRGEAVPAIASVSRFRLDTSPGE 117
Query: 120 RPNGYRKVMKGSKCLYLG-IDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKK 178
G R ++G LG + + GTTV RDLF+N P RRK+M+++ + H V +
Sbjct: 118 DGAGTRVEIEGG---VLGEVAPVARPRGTTVEVRDLFFNTPARRKFMRAASTEAGH-VSE 173
Query: 179 CVLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLA-LLISSFGIEDFSFLDEVNANDGA 237
V+R+AL P V F + S L+ + LA + G E L V+A G
Sbjct: 174 AVIRLALARPDVGFT---LRSGGRLVLGARAGGGLADRAGQALGREAHRHLLPVDARRGE 230
Query: 238 LEISGYISSPYDSISVKAFQYVYINSRYVC-KGPIHKLLNHLAASFDCSDSWKANNGFLK 296
+ + G I SP S + Y+++N RYV + H +L A +
Sbjct: 231 VRVHGLICSPDHSEATGRALYLFVNGRYVRDRAAAHAVLRAFAGTLPPGRH--------- 281
Query: 297 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKD----WEPVLAFIERAIRSA-WM 351
PA +L + P D+ P K V F + ++ + + A+R+A W+
Sbjct: 282 ---------PAGVLFVELPLDRVDVNVHPQKLEVRFAEGREVFDALFHTVAGALRTAPWL 332
Query: 352 K 352
+
Sbjct: 333 R 333
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 1182 GGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIK 1241
GGTL VIDQHA+ ER+ L+ + YL Q + LP + L+ ++
Sbjct: 436 GGTLVVIDQHASHERMLFHRLKEAFRARRIPVQPYL-LPQVVTLPPAAARALEAGLAELG 494
Query: 1242 DWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDG 1301
G+ + G +F A + GV+L+ + L + QLAD +
Sbjct: 495 RLGF--DAEPFGGDAFAVK-------------GAPAALAGVDLTAL-LTDLGSQLADVER 538
Query: 1302 SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVN 1361
S + +L + AC A+ + P E +++ L +C HGRP L +
Sbjct: 539 GSAVDDAFHDLLATMACHAAVRANQDVSPEEARALLDGLDAIDFKARCPHGRPVVFEL-S 597
Query: 1362 LEALHKQIAQ 1371
L L +++ +
Sbjct: 598 LADLERRVGR 607
>sp|B2IS10|MUTL_STRPS DNA mismatch repair protein MutL OS=Streptococcus pneumoniae
(strain CGSP14) GN=mutL PE=3 SV=1
Length = 649
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>sp|B8ZKC9|MUTL_STRPJ DNA mismatch repair protein MutL OS=Streptococcus pneumoniae
(strain ATCC 700669 / Spain 23F-1) GN=mutL PE=3 SV=1
Length = 649
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>sp|B1I8F2|MUTL_STRPI DNA mismatch repair protein MutL OS=Streptococcus pneumoniae
(strain Hungary19A-6) GN=mutL PE=3 SV=1
Length = 649
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>sp|Q04MR4|MUTL_STRP2 DNA mismatch repair protein MutL OS=Streptococcus pneumoniae
serotype 2 (strain D39 / NCTC 7466) GN=mutL PE=3 SV=1
Length = 649
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>sp|P0A3R2|HEXB_STRR6 DNA mismatch repair protein HexB OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=hexB PE=3 SV=1
Length = 649
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>sp|P0A3R1|HEXB_STRPN DNA mismatch repair protein HexB OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=hexB PE=3
SV=1
Length = 649
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVEQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>sp|C1CP43|MUTL_STRZT DNA mismatch repair protein MutL OS=Streptococcus pneumoniae
(strain Taiwan19F-14) GN=mutL PE=3 SV=1
Length = 649
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVDQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>sp|C1CI68|MUTL_STRZP DNA mismatch repair protein MutL OS=Streptococcus pneumoniae
(strain P1031) GN=mutL PE=3 SV=1
Length = 649
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 46/437 (10%)
Query: 1 MGTINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNCY-VKVVDD 59
M I LPE + N + +G V+ VV+ELV N++DAG++++ + + V++ D+
Sbjct: 1 MSHIIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDN 60
Query: 60 GSGISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHG 119
G GI+ D + L RHATSK+ + AD+ I T GFRGEAL SI+ VS+L ++T G
Sbjct: 61 GHGIAHDEVELALRRHATSKIKNQADL---FRIRTLGFRGEALPSIASVSVLTLLTAVDG 117
Query: 120 RPNGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
+G + V +G + + VGT V DLF+N P R KYM+S ++ H +
Sbjct: 118 ASHGTKLVARGGEV--EEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHII-DI 174
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
V R+ L HP++SF I E+ T + + +G+ + E+ +D E
Sbjct: 175 VNRLGLAHPEISFSLIS--DGKEMTRTAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFE 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISG++S P + + + + ++IN RY+ ++ N L G
Sbjct: 233 ISGFVSLPELTRANRNYISLFINGRYI-------------------KNFLLNRAILDGFG 273
Query: 300 SKSQAC--PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 357
SK P ++++ L D+ P K V + ++ + AI ++ ++
Sbjct: 274 SKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVSEAIANSLKEQ---- 329
Query: 358 SFDVDMLEDAELPLESSRFQSHQSSTHLHSSPLKNLAKQRDHMFHKECE--RITFQEFQK 415
+ D LE+ L + R + T L PLK + +++++ E R + E
Sbjct: 330 TLIPDALEN--LAKSTVRNREKVDQTIL---PLKE-----NTLYYEKTEPSRPSQTEVAD 379
Query: 416 DPVELAEENTEMEFFSQ 432
VEL +E ++ F++
Sbjct: 380 YQVELTDEGQDLTLFAK 396
>sp|A8FRD3|MUTL_SHESH DNA mismatch repair protein MutL OS=Shewanella sediminis (strain
HAW-EB3) GN=mutL PE=3 SV=1
Length = 624
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 185/380 (48%), Gaps = 31/380 (8%)
Query: 3 TINRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGS 61
TI LP + N + +G V+ V++ELV NS+DAGAT+V + + +K+ D+GS
Sbjct: 2 TIQILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIKIHDNGS 61
Query: 62 GISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRP 121
GIS++ L L RHATSKL L D+D I +FGFRGEALASIS VS L + ++ +
Sbjct: 62 GISKEDLGLALSRHATSKLSSLDDLD---AILSFGFRGEALASISSVSRLTLTSRTADQV 118
Query: 122 NGYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVL 181
++ +GS + + + VG+TV + DLF+N P RR++++S + H + + +
Sbjct: 119 EAWQAYAEGSD-MAVKVIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTH-IDEWLK 176
Query: 182 RIALVHPKVSFKFI-DMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALEI 240
RIALV + F + + T + L L G + E+N L++
Sbjct: 177 RIALVRSDIHFTLKHNGKVVRNYRATNTQDQYLQRLAQISGKKFAEQAIEINCQHDDLKL 236
Query: 241 SGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRS 300
+GY+ SP+ QY Y+N R V +L+NH A +
Sbjct: 237 TGYVQSPFFETPASDTQYFYVNGRLVRD----RLVNH------------AVRQAFAEHET 280
Query: 301 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFD 360
QA +L L PH + D+ P K V F V +I +A++SA + ++ + D
Sbjct: 281 GEQASYVLMLELD-PHQV-DVNVHPAKHEVRFHQSRYVHDYIFQALQSA-LHQVGRLAID 337
Query: 361 VDMLEDAELPLESSRFQSHQ 380
D D + S QSH+
Sbjct: 338 SDNKLDTD-----SHSQSHE 352
>sp|A1AT89|MUTL_PELPD DNA mismatch repair protein MutL OS=Pelobacter propionicus (strain
DSM 2379) GN=mutL PE=3 SV=1
Length = 608
Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 173/359 (48%), Gaps = 38/359 (10%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
I LPE + N + +G V+ V++EL+ NS+DAGAT + V + +++ D+G G
Sbjct: 5 IAILPEIITNKIAAGEVVERPASVIKELIENSLDAGATDISVEIAAGGRRLIRITDNGHG 64
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
+SR+ +L ERHATSK+ D+D GI T GFRGEAL S++ VS L + ++ P
Sbjct: 65 MSREDALLSLERHATSKIRSDNDLD---GIHTLGFRGEALPSVASVSRLRLSSRETDSPE 121
Query: 123 GYRKVMKGSKCLYLGIDDERK---DVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKC 179
G +++G K + D R GT + +F+N P R K+++S+ + H V C
Sbjct: 122 GTEIIVEGGK-----VRDVRACGMAPGTVISVEQIFFNTPARLKFLRSAETEAGH-VGDC 175
Query: 180 VLRIALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLDEVNANDGALE 239
+ R+A+ P V+F S+ L L L + G + L E++ + ++
Sbjct: 176 LTRMAISRPDVAFS---CSSDGRDLLRVQRGDLLRRLSQALGKGTAASLHELHLSRDGID 232
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
ISGYISSP S + + YIN R++ K++ H +A G + R
Sbjct: 233 ISGYISSPAACRSTTSAMFTYINGRFIRD----KVIQHAI--------MQAYRGVMDRGR 280
Query: 300 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI-----RSAWMKK 353
P L ++ P + D+ P K V F+ V ++ A+ RS W+ +
Sbjct: 281 -----YPVVALFIQLPPAEVDVNVHPTKHEVRFRRQSLVHDTLQSALEELLKRSPWLPR 334
Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 29/209 (13%)
Query: 1167 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 1226
+++ Q ++I +G L +IDQHAA ER+ ++LRH+ + +S Q L+ P
Sbjct: 421 RIIGQFHDEYILCQSGDQLVIIDQHAASERVAFQKLRHQFDTDGVES-------QRLLFP 473
Query: 1227 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI-----TVITLLAVPCIFG 1281
E L +F+E +R F L + ++ + + A+P +
Sbjct: 474 E---TLELSFSE------------ADTARRFGNELARIGFELEPFGGNTVIVSAIPRLAI 518
Query: 1282 VNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELK 1341
+ + + L +L SS S +L+ AC + L + ++ +
Sbjct: 519 ARDASGLIRDLLAELTQLGASSAFLDSRDALLSRIACHSVVRGVHRLEERQIRELLHGMD 578
Query: 1342 QTSLCFQCAHGRPTT--VPLVNLEALHKQ 1368
T C HGRP + + L LE + K+
Sbjct: 579 GTDFAASCPHGRPVSHVITLGELERIFKR 607
>sp|B4F203|MUTL_PROMH DNA mismatch repair protein MutL OS=Proteus mirabilis (strain
HI4320) GN=mutL PE=3 SV=1
Length = 669
Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 179/364 (49%), Gaps = 31/364 (8%)
Query: 4 INRLPEAVRNTVRSGTVLFDLTRVVEELVFNSVDAGATKVFVYVGVCNC-YVKVVDDGSG 62
IN LP + N + +G V+ VV+EL+ NS+DAGAT + + + +++ D+G G
Sbjct: 3 INLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNGCG 62
Query: 63 ISRDGLVLLGERHATSKLGHLADMDDATGIGTFGFRGEALASISDVSLLEIITKAHGRPN 122
ISRD L L RHATSK ++ +DD I + GFRGEALASIS VS L + ++ +
Sbjct: 63 ISRDDLKLALARHATSK---ISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEE 119
Query: 123 GYRKVMKGSKCLYLGIDDERKDVGTTVVSRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR 182
++ +G + + + + VG+TV DLFYN P RRK++++ + H + + V R
Sbjct: 120 AWQAYAEG-RDMTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGH-IDEVVRR 177
Query: 183 IALVHPKVSFKFIDMESEDELLCTCSSSSPLALLISSFGIEDFSFLD---EVNANDGALE 239
IAL VS + +S+ I F+D ++ G L
Sbjct: 178 IALSRFDVSINLTHNGKRVRQYRAAKETHQHHRRLSA--ICGNHFVDQAMQLTWEHGDLA 235
Query: 240 ISGYISSPYDSISVKAFQYVYINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKR 299
I G++ P + QY Y+N R + +L+NH +A G+L+G++
Sbjct: 236 IKGWVEHPLAPVQGSEIQYCYVNGRMMRD----RLINHAIR--------QAYEGYLQGEQ 283
Query: 300 SKSQACPAYLLNLRC-PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDS 358
P+Y+L L PH + D+ P K V F + V FI +A+ S ++++ D+
Sbjct: 284 Q-----PSYVLYLTVDPHQV-DVNVHPAKHEVRFHESRLVHDFIYQAVLSV-LRQVTEDT 336
Query: 359 FDVD 362
+D
Sbjct: 337 LSLD 340
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 543,792,767
Number of Sequences: 539616
Number of extensions: 24093521
Number of successful extensions: 55809
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 52657
Number of HSP's gapped (non-prelim): 1074
length of query: 1402
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1272
effective length of database: 121,419,379
effective search space: 154445450088
effective search space used: 154445450088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)