Query 000595
Match_columns 1401
No_of_seqs 219 out of 636
Neff 3.3
Searched_HMMs 29240
Date Tue Mar 26 17:19:39 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000595.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_366-369//hhsearch_pdb/000595hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ysm_A Myeloid/lymphoid or mix 1.0 1 1 109.2 5.4 101 224-362 4-107 (111)
2 2ysm_A Myeloid/lymphoid or mix 1.0 1 1 107.7 5.6 91 287-408 7-98 (111)
3 3v43_A Histone acetyltransfera 1.0 1 1 106.4 7.6 103 287-413 5-109 (112)
4 2kwj_A Zinc finger protein DPF 1.0 1 1 102.4 6.7 97 289-408 3-102 (114)
5 2kwj_A Zinc finger protein DPF 1.0 1 1 94.8 3.3 93 227-354 1-105 (114)
6 3v43_A Histone acetyltransfera 1.0 1 1 92.3 4.8 96 226-355 4-110 (112)
7 4gne_A Histone-lysine N-methyl 1.0 1 1 89.3 5.6 74 226-328 14-88 (107)
8 4gne_A Histone-lysine N-methyl 1.0 1 1 86.2 6.6 88 287-422 15-102 (107)
9 3u5n_A E3 ubiquitin-protein li 1.0 1 1 76.7 3.3 51 223-285 3-53 (207)
10 3o36_A Transcription intermedi 1.0 1 1 73.4 3.6 30 372-408 16-45 (184)
No 1
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=109.19 Aligned_cols=101 Identities=26% Similarity=0.718 Sum_probs=68.2
Q ss_pred CCCCCCCCCCCCCCCE---EECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3478656634788932---1024643455447633375431124799834340137410366410133334347788888
Q 000595 224 ELFDSVCSFCDNGGDL---LCCEGRCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYKQHQCFACGKLGSSD 300 (1401)
Q Consensus 224 dl~DdVCaICedGGeL---LCCDG~C~RSFH~sCldGeeS~ClsLGLTeaevqa~esWiC~nCe~gQHqCFVCGklGSSD 300 (1401)
..++++|.+|+++|++ |+|+ .|.++||+.|+. +..+ ++ +...|+|++|. .|++|++.+..
T Consensus 4 ~~~~~~C~~C~~~g~~~~ll~C~-~C~~~~H~~Cl~--------~~~~--~~-~~~~W~C~~C~----~C~~C~~~~~~- 66 (111)
T 2ysm_A 4 GSSGANCAVCDSPGDLLDQFFCT-TCGQHYHGMCLD--------IAVT--PL-KRAGWQCPECK----VCQNCKQSGED- 66 (111)
T ss_dssp CCCCSCBTTTCCCCCTTTSEECS-SSCCEECTTTTT--------CCCC--TT-TSTTCCCTTTC----CCTTTCCCSCC-
T ss_pred CCCCCCCCCCCCCCCCCCCEECC-CCCCCCCHHHHC--------CCCC--CC-CCCCCCCCCCC----CCCCCCCCCCC-
T ss_conf 89979995789988875885999-999773967708--------8655--44-56686587678----26234765898-
Q ss_pred CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCC
Q ss_conf 89998054217888899783121111235652788877767220699402799733336888
Q 000595 301 KETGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLHKCCICKQG 362 (1401)
Q Consensus 301 ksSgaELLkCsvasCGKFYHpsCIa~ll~pvdE~~ateLekkIaaG~sF~CPlH~C~vCKks 362 (1401)
..++.|. .|.+.||..|+.+.+.. +.. ..|+|| .|..|+.+
T Consensus 67 ----~~ll~Cd--~C~~~yH~~Cl~ppl~~------------~P~-g~W~C~--~C~~c~~g 107 (111)
T 2ysm_A 67 ----SKMLVCD--TCDKGYHTFCLQPVMKS------------VPT-NGWKCK--NCRICISG 107 (111)
T ss_dssp ----TTEEECS--SSCCEEEGGGSSSCCSS------------CCS-SCCCCH--HHHCCSCS
T ss_pred ----CCEEECC--CCCCHHHHHHCCCCCCC------------CCC-CCCCCC--CCCCCCCC
T ss_conf ----7765899--99808869865876566------------889-882992--88272878
No 2
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=107.72 Aligned_cols=91 Identities=31% Similarity=0.732 Sum_probs=75.0
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCC-CCCCCCCCCC
Q ss_conf 333343477888888999805421788889978312111123565278887776722069940279973-3336888778
Q 000595 287 QHQCFACGKLGSSDKETGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLHK-CCICKQGENK 365 (1401)
Q Consensus 287 QHqCFVCGklGSSDksSgaELLkCsvasCGKFYHpsCIa~ll~pvdE~~ateLekkIaaG~sF~CPlH~-C~vCKkseDk 365 (1401)
...|.+|+..|.. .+++.|. .|++.||+.|+.....+ + ....|.||.+. |.+|+..++.
T Consensus 7 ~~~C~~C~~~g~~-----~~ll~C~--~C~~~~H~~Cl~~~~~~------------~-~~~~W~C~~C~~C~~C~~~~~~ 66 (111)
T 2ysm_A 7 GANCAVCDSPGDL-----LDQFFCT--TCGQHYHGMCLDIAVTP------------L-KRAGWQCPECKVCQNCKQSGED 66 (111)
T ss_dssp CSCBTTTCCCCCT-----TTSEECS--SSCCEECTTTTTCCCCT------------T-TSTTCCCTTTCCCTTTCCCSCC
T ss_pred CCCCCCCCCCCCC-----CCCEECC--CCCCCCCHHHHCCCCCC------------C-CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 7999578998887-----5885999--99977396770886554------------4-5668658767826234765898
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8888860434668821124678987544210012433454333
Q 000595 366 ADSDLQFAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEG 408 (1401)
Q Consensus 366 t~segQLIvCdRCPkAYHlkCLPppIsFe~~~~EgIp~RAW~c 408 (1401)
.+|+.|+.|+++||..||.|++. .+|...|.|
T Consensus 67 ----~~ll~Cd~C~~~yH~~Cl~ppl~-------~~P~g~W~C 98 (111)
T 2ysm_A 67 ----SKMLVCDTCDKGYHTFCLQPVMK-------SVPTNGWKC 98 (111)
T ss_dssp ----TTEEECSSSCCEEEGGGSSSCCS-------SCCSSCCCC
T ss_pred ----CCEEECCCCCCHHHHHHCCCCCC-------CCCCCCCCC
T ss_conf ----77658999980886986587656-------688988299
No 3
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=1.00 E-value=1 Score=106.37 Aligned_cols=103 Identities=18% Similarity=0.455 Sum_probs=76.7
Q ss_pred CCCCCCCCCCCCCCCC-CCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCC-CCCCCCCCCC
Q ss_conf 3333434778888889-9980542178888997831211112356527888777672206994027997-3333688877
Q 000595 287 QHQCFACGKLGSSDKE-TGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLH-KCCICKQGEN 364 (1401)
Q Consensus 287 QHqCFVCGklGSSDks-SgaELLkCsvasCGKFYHpsCIa~ll~pvdE~~ateLekkIaaG~sF~CPlH-~C~vCKkseD 364 (1401)
.+.|.+|...+..++. .+.+|+.|. .|++.||+.||...+. +...+. ...|.||.+ .|.+|+..++
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~--~C~~~~H~~Cl~~~~~---------~~~~~~-~~~W~C~~C~~C~vC~~~~~ 72 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCA--DCGNSGHPSCLKFSPE---------LTVRVK-ALRWQCIECKTCSSCRDQGK 72 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECT--TTCCEECHHHHTCCHH---------HHHHHH-TSCCCCTTTCCBTTTCCCCC
T ss_pred CCCCCCCCCCHHHCCCCCCHHCEEHH--HCCCCCCCCHHCCCHH---------HHHHHH-CCCCCCCCCCCCCCCCCCCC
T ss_conf 76131038933427689911163753--4499889703538889---------998754-24653011775446668688
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8888886043466882112467898754421001243345433335798
Q 000595 365 KADSDLQFAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEGLLPNH 413 (1401)
Q Consensus 365 kt~segQLIvCdRCPkAYHlkCLPppIsFe~~~~EgIp~RAW~cLLsnc 413 (1401)
+ +.+|+.|+.|+++||.+||.|++. .+|...|.| +.|
T Consensus 73 ~---~~~ll~Cd~C~~~yH~~Cl~p~l~-------~~P~~~W~C--~~C 109 (112)
T 3v43_A 73 N---ADNMLFCDSCDRGFHMECCDPPLT-------RMPKGMWIC--QIC 109 (112)
T ss_dssp T---TCCCEECTTTCCEECGGGCSSCCS-------SCCSSCCCC--TTT
T ss_pred C---CCCEEECCCCCCEEECCCCCCCCC-------CCCCCCEEC--CCC
T ss_conf 8---565687489989156635899989-------899988579--787
No 4
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=1.00 E-value=1 Score=102.39 Aligned_cols=97 Identities=26% Similarity=0.567 Sum_probs=71.3
Q ss_pred CCCCCCCCCCCCCC--CCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCC-CCCCCCCCCCC
Q ss_conf 33434778888889--9980542178888997831211112356527888777672206994027997-33336888778
Q 000595 289 QCFACGKLGSSDKE--TGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLH-KCCICKQGENK 365 (1401)
Q Consensus 289 qCFVCGklGSSDks--SgaELLkCsvasCGKFYHpsCIa~ll~pvdE~~ateLekkIaaG~sF~CPlH-~C~vCKkseDk 365 (1401)
.|.+|...+..++. .+.+|+.|. .|++.||+.||...+. +...+. ...|.||.+ .|.+|+...+.
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~--~C~~~~H~~Cl~~~~~---------~~~~~~-~~~W~C~~C~~C~~C~~~~~~ 70 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCA--DCGRSGHPTCLQFTLN---------MTEAVK-TYKWQCIECKSCILCGTSEND 70 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECS--SSCCEECTTTTTCCHH---------HHHHHH-HTTCCCGGGCCCTTTTCCTTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEC--CCCCCCCHHHCCCHHH---------HHHCCC-CCCCCCCCCCCCCCCCCCCCC
T ss_conf 0865889753444679999986929--8998323213878466---------431168-775175662733756346888
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8888860434668821124678987544210012433454333
Q 000595 366 ADSDLQFAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEG 408 (1401)
Q Consensus 366 t~segQLIvCdRCPkAYHlkCLPppIsFe~~~~EgIp~RAW~c 408 (1401)
+.|+.|+.|+++||.+||.|++. .+|...|.|
T Consensus 71 ----~~ll~Cd~C~~~yH~~Cl~ppl~-------~~P~g~W~C 102 (114)
T 2kwj_A 71 ----DQLLFCDDCDRGYHMYCLNPPVA-------EPPEGSWSC 102 (114)
T ss_dssp ----TTEEECSSSCCEEETTTSSSCCS-------SCCSSCCCC
T ss_pred ----CCEEECCCCCCCCCCCCCCCCCC-------CCCCCCEEC
T ss_conf ----74577489894102504598746-------788978199
No 5
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=1.00 E-value=1 Score=94.77 Aligned_cols=93 Identities=29% Similarity=0.631 Sum_probs=68.8
Q ss_pred CCCCCCCCCC----------CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHH--HHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8656634788----------9321024643455447633375431124799834--340137410366410133334347
Q 000595 227 DSVCSFCDNG----------GDLLCCEGRCLRSFHATIDAGEESHCASLGLTKD--EVEAMLNFFCKNCEYKQHQCFACG 294 (1401)
Q Consensus 227 DdVCaICedG----------GeLLCCDG~C~RSFH~sCldGeeS~ClsLGLTea--evqa~esWiC~nCe~gQHqCFVCG 294 (1401)
.++|.+|..+ |+||+|+ .|.++||+.|+ +++.. +..+...|+|++|. .|.+|+
T Consensus 1 ~~~C~~C~~~~~~n~k~g~~~~Li~C~-~C~~~~H~~Cl----------~~~~~~~~~~~~~~W~C~~C~----~C~~C~ 65 (114)
T 2kwj_A 1 GSYCDFCLGGSNMNKKSGRPEELVSCA-DCGRSGHPTCL----------QFTLNMTEAVKTYKWQCIECK----SCILCG 65 (114)
T ss_dssp CCCCSSSCCBTTBCTTTCCCCCCEECS-SSCCEECTTTT----------TCCHHHHHHHHHTTCCCGGGC----CCTTTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEC-CCCCCCCHHHC----------CCHHHHHHCCCCCCCCCCCCC----CCCCCC
T ss_conf 980865889753444679999986929-89983232138----------784664311687751756627----337563
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCC
Q ss_conf 788888899980542178888997831211112356527888777672206994027997
Q 000595 295 KLGSSDKETGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLH 354 (1401)
Q Consensus 295 klGSSDksSgaELLkCsvasCGKFYHpsCIa~ll~pvdE~~ateLekkIaaG~sF~CPlH 354 (1401)
..+. ..+++.|. .|.+.||..|+.+.+.. +.. ..|.||.|
T Consensus 66 ~~~~-----~~~ll~Cd--~C~~~yH~~Cl~ppl~~------------~P~-g~W~C~~C 105 (114)
T 2kwj_A 66 TSEN-----DDQLLFCD--DCDRGYHMYCLNPPVAE------------PPE-GSWSCHLC 105 (114)
T ss_dssp CCTT-----TTTEEECS--SSCCEEETTTSSSCCSS------------CCS-SCCCCHHH
T ss_pred CCCC-----CCCEEECC--CCCCCCCCCCCCCCCCC------------CCC-CCEECCCC
T ss_conf 4688-----87457748--98941025045987467------------889-78199241
No 6
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=1.00 E-value=1 Score=92.25 Aligned_cols=96 Identities=25% Similarity=0.635 Sum_probs=70.6
Q ss_pred CCCCCCCCCC---------CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHH--HHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7865663478---------89321024643455447633375431124799834--340137410366410133334347
Q 000595 226 FDSVCSFCDN---------GGDLLCCEGRCLRSFHATIDAGEESHCASLGLTKD--EVEAMLNFFCKNCEYKQHQCFACG 294 (1401)
Q Consensus 226 ~DdVCaICed---------GGeLLCCDG~C~RSFH~sCldGeeS~ClsLGLTea--evqa~esWiC~nCe~gQHqCFVCG 294 (1401)
...+|.+|.. +++||.|+ .|.++||+. | |+++.. ...+...|+|++|. .|.+|+
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~-~C~~~~H~~--------C--l~~~~~~~~~~~~~~W~C~~C~----~C~vC~ 68 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCA-DCGNSGHPS--------C--LKFSPELTVRVKALRWQCIECK----TCSSCR 68 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECT-TTCCEECHH--------H--HTCCHHHHHHHHTSCCCCTTTC----CBTTTC
T ss_pred CCCCCCCCCCCHHHCCCCCCHHCEEHH-HCCCCCCCC--------H--HCCCHHHHHHHHCCCCCCCCCC----CCCCCC
T ss_conf 676131038933427689911163753-449988970--------3--5388899987542465301177----544666
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCC
Q ss_conf 7888888999805421788889978312111123565278887776722069940279973
Q 000595 295 KLGSSDKETGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLHK 355 (1401)
Q Consensus 295 klGSSDksSgaELLkCsvasCGKFYHpsCIa~ll~pvdE~~ateLekkIaaG~sF~CPlH~ 355 (1401)
..|.. ..+++.|. .|.+.||..|+.+.+.. +.. ..|.||.+.
T Consensus 69 ~~~~~----~~~ll~Cd--~C~~~yH~~Cl~p~l~~------------~P~-~~W~C~~C~ 110 (112)
T 3v43_A 69 DQGKN----ADNMLFCD--SCDRGFHMECCDPPLTR------------MPK-GMWICQICR 110 (112)
T ss_dssp CCCCT----TCCCEECT--TTCCEECGGGCSSCCSS------------CCS-SCCCCTTTS
T ss_pred CCCCC----CCCEEECC--CCCCEEECCCCCCCCCC------------CCC-CCEECCCCC
T ss_conf 86888----56568748--99891566358999898------------999-885797878
No 7
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=1.00 E-value=1 Score=89.26 Aligned_cols=74 Identities=27% Similarity=0.640 Sum_probs=39.7
Q ss_pred CCCCCCCCCCCCCEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7865663478893210246-434554476333754311247998343401374103664101333343477888888999
Q 000595 226 FDSVCSFCDNGGDLLCCEG-RCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYKQHQCFACGKLGSSDKETG 304 (1401)
Q Consensus 226 ~DdVCaICedGGeLLCCDG-~C~RSFH~sCldGeeS~ClsLGLTeaevqa~esWiC~nCe~gQHqCFVCGklGSSDksSg 304 (1401)
.+++|.+|+++|+||+|+. .|+++||+. | |+++.. +.+.|+|+.|. |.+|++..
T Consensus 14 ~~~~C~~C~~~G~ll~CD~~~Cp~~fH~~--------C--l~L~~~---P~g~W~Cp~c~-----C~~C~k~~------- 68 (107)
T 4gne_A 14 HEDYCFQCGDGGELVMCDKKDCPKAYHLL--------C--LNLTQP---PYGKWECPWHQ-----CDECSSAA------- 68 (107)
T ss_dssp SCSSCTTTCCCSEEEECCSTTCCCEECTG--------G--GTCSSC---CSSCCCCGGGB-----CTTTCSBC-------
T ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCC--------C--CCCCCC---CCCCEECCCCC-----CCCCCCCC-------
T ss_conf 97999847997847577999999265225--------1--868757---99888898999-----88177989-------
Q ss_pred CEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 805421788889978312111123
Q 000595 305 AEVFPCVSATCGHFYHPHCVSKLL 328 (1401)
Q Consensus 305 aELLkCsvasCGKFYHpsCIa~ll 328 (1401)
-+.|. .|++.||..|+...+
T Consensus 69 --~~~C~--~Cp~sfC~~c~~g~l 88 (107)
T 4gne_A 69 --VSFCE--FCPHSFCKDHEKGAL 88 (107)
T ss_dssp --CEECS--SSSCEECTTTCTTSC
T ss_pred --CCCCC--CCCCCHHHHCCCCCC
T ss_conf --86747--787101121158731
No 8
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=1.00 E-value=1 Score=86.23 Aligned_cols=88 Identities=23% Similarity=0.573 Sum_probs=69.4
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 33334347788888899980542178888997831211112356527888777672206994027997333368887788
Q 000595 287 QHQCFACGKLGSSDKETGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLHKCCICKQGENKA 366 (1401)
Q Consensus 287 QHqCFVCGklGSSDksSgaELLkCsvasCGKFYHpsCIa~ll~pvdE~~ateLekkIaaG~sF~CPlH~C~vCKkseDkt 366 (1401)
...|++|+.. ++|+.|....|.+.||..||.... +.. ..|.||.|.|..|++..
T Consensus 15 ~~~C~~C~~~--------G~ll~CD~~~Cp~~fH~~Cl~L~~--------------~P~-g~W~Cp~c~C~~C~k~~--- 68 (107)
T 4gne_A 15 EDYCFQCGDG--------GELVMCDKKDCPKAYHLLCLNLTQ--------------PPY-GKWECPWHQCDECSSAA--- 68 (107)
T ss_dssp CSSCTTTCCC--------SEEEECCSTTCCCEECTGGGTCSS--------------CCS-SCCCCGGGBCTTTCSBC---
T ss_pred CCCCCCCCCC--------CCEEEECCCCCCCCCCCCCCCCCC--------------CCC-CCEECCCCCCCCCCCCC---
T ss_conf 7999847997--------847577999999265225186875--------------799-88889899988177989---
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 88886043466882112467898754421001243345433335798366845687
Q 000595 367 DSDLQFAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEGLLPNHRILIYCLKH 422 (1401)
Q Consensus 367 ~segQLIvCdRCPkAYHlkCLPppIsFe~~~~EgIp~RAW~cLLsncRiLIyCpkH 422 (1401)
-+.|..||.|||.+|++..+. ..+...|.| |..|
T Consensus 69 -----~~~C~~Cp~sfC~~c~~g~l~-------~~~~~~~~c----------~~~~ 102 (107)
T 4gne_A 69 -----VSFCEFCPHSFCKDHEKGALV-------PSALEGRLC----------CSEH 102 (107)
T ss_dssp -----CEECSSSSCEECTTTCTTSCE-------ECTTTTCEE----------CTTS
T ss_pred -----CCCCCCCCCCHHHHCCCCCCE-------ECCCCCCEE----------CCCC
T ss_conf -----867477871011211587311-------027889666----------6778
No 9
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=1.00 E-value=1 Score=76.70 Aligned_cols=51 Identities=37% Similarity=0.786 Sum_probs=38.5
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
Q ss_conf 234786566347889321024643455447633375431124799834340137410366410
Q 000595 223 DELFDSVCSFCDNGGDLLCCEGRCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEY 285 (1401)
Q Consensus 223 ddl~DdVCaICedGGeLLCCDG~C~RSFH~sCldGeeS~ClsLGLTeaevqa~esWiC~nCe~ 285 (1401)
++.++++|.+|+++|+||+|++ |.++||..|+ ..+++.. +.+.|+|+.|..
T Consensus 3 ~d~~~~~C~~C~~~g~ll~Cd~-C~~~~H~~Cl--------~p~l~~~---p~~~W~C~~C~~ 53 (207)
T 3u5n_A 3 DDPNEDWCAVCQNGGDLLCCEK-CPKVFHLTCH--------VPTLLSF---PSGDWICTFCRD 53 (207)
T ss_dssp CCSSCSSBTTTCCCEEEEECSS-SSCEECTTTS--------SSCCSSC---CSSCCCCTTTSC
T ss_pred CCCCCCCCCCCCCCCCEEECCC-CCCCCCCCCC--------CCCCCCC---CCCCEEECCEEC
T ss_conf 7888898988899993677699-9984387158--------9998888---998878684268
No 10
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=1.00 E-value=1 Score=73.39 Aligned_cols=30 Identities=23% Similarity=0.733 Sum_probs=14.3
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0434668821124678987544210012433454333
Q 000595 372 FAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEG 408 (1401)
Q Consensus 372 LIvCdRCPkAYHlkCLPppIsFe~~~~EgIp~RAW~c 408 (1401)
|+.|+.|+.+||..||.|++. .++...|.|
T Consensus 16 ll~Cd~C~~~~H~~C~~p~l~-------~~p~~~W~C 45 (184)
T 3o36_A 16 LLCCEKCPKVFHLSCHVPTLT-------NFPSGEWIC 45 (184)
T ss_dssp CEECSSSSCEECTTTSSSCCS-------SCCSSCCCC
T ss_pred EEECCCCCCCCCCCCCCCCCC-------CCCCCCEEC
T ss_conf 566299995308113689878-------799988789
Done!